BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 Pfam PF07702 UTRA domain 91 224 1.5E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 SUPERFAMILY SSF64288 52 232 1.73E-47 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 6.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 6.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 Gene3D G3DSA:3.40.1410.10 70 228 5.3E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 SMART SM00345 5 64 5.2E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 2.8E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 SMART SM00866 85 224 3.1E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 SUPERFAMILY SSF46785 2 68 5.2E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18710 dd4a62840841196686f8e70c981e41a0 234 Gene3D G3DSA:1.10.10.10 1 69 9.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 SUPERFAMILY SSF52540 297 526 1.7E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 Pfam PF00005 ABC transporter 315 461 5.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 Gene3D G3DSA:3.40.50.300 296 573 6.7E-65 T 14-10-2018 BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 SMART SM00382 29 221 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 SMART SM00382 324 510 6.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 SUPERFAMILY SSF52540 2 235 1.36E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 Gene3D G3DSA:3.40.50.300 1 251 1.4E-68 T 14-10-2018 BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 1.3E-20 T 14-10-2018 IPR022216 Putative ABC cobalt transporter BJD94_19530 08db323aaabaa33c2d802f0d76a13e7c 574 Pfam PF00005 ABC transporter 20 170 1.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 Gene3D G3DSA:3.40.190.290 92 289 1.2E-46 T 14-10-2018 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 SUPERFAMILY SSF46785 1 86 8.86E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.5E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 Gene3D G3DSA:1.10.10.10 1 91 6.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 SUPERFAMILY SSF53850 90 288 4.44E-40 T 14-10-2018 BJD94_04745 abd692e749115c8ac741c8e4552b1ffd 289 Pfam PF03466 LysR substrate binding domain 88 287 5.1E-44 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 16 196 3.9E-62 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 Gene3D G3DSA:3.40.50.150 6 197 5.0E-65 T 14-10-2018 BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 PIRSF PIRSF004553 18 197 4.8E-56 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 SUPERFAMILY SSF53335 19 195 3.87E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_11695 3e2a633be6b9c71a06cad5a6d51b0746 197 Pfam PF03602 Conserved hypothetical protein 95 19 195 8.5E-63 T 14-10-2018 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF00005 ABC transporter 20 161 1.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 SMART SM00382 28 211 8.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF50331 236 361 2.92E-31 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.100 239 361 1.3E-49 T 14-10-2018 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF08402 TOBE domain 281 353 9.6E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF52540 4 243 3.51E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:3.40.50.300 1 238 5.8E-75 T 14-10-2018 BJD94_19790 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.140 287 344 1.3E-49 T 14-10-2018 BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Gene3D G3DSA:3.30.450.20 17 131 2.9E-16 T 14-10-2018 BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SMART SM00267 134 303 1.1E-7 T 14-10-2018 IPR000160 GGDEF domain BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Gene3D G3DSA:3.20.20.450 313 566 6.5E-78 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SUPERFAMILY SSF141868 318 563 1.83E-72 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Pfam PF00563 EAL domain 320 554 3.4E-63 T 14-10-2018 IPR001633 EAL domain BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SMART SM00052 313 559 1.1E-66 T 14-10-2018 IPR001633 EAL domain BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SUPERFAMILY SSF55073 152 304 9.42E-15 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SUPERFAMILY SSF55785 26 136 1.5E-16 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Pfam PF08447 PAS fold 45 121 4.8E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 296 2.9E-12 T 14-10-2018 IPR000160 GGDEF domain BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 Gene3D G3DSA:3.30.70.270 140 309 5.0E-17 T 14-10-2018 BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 2.0E-12 T 14-10-2018 IPR000014 PAS domain BJD94_02080 8dcf9ddad6304f1ba03eeb769a1efa0c 570 SMART SM00086 94 134 1.0E-5 T 14-10-2018 IPR001610 PAC motif BJD94_20185 dc5850c5432c986e8815509709a97652 367 Gene3D G3DSA:3.90.1150.10 8 353 6.6E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_20185 dc5850c5432c986e8815509709a97652 367 PIRSF PIRSF000524 1 365 7.1E-58 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BJD94_20185 dc5850c5432c986e8815509709a97652 367 Pfam PF00266 Aminotransferase class-V 36 313 7.9E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_20185 dc5850c5432c986e8815509709a97652 367 SUPERFAMILY SSF53383 3 362 6.48E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20185 dc5850c5432c986e8815509709a97652 367 Gene3D G3DSA:3.40.640.10 16 262 6.6E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20185 dc5850c5432c986e8815509709a97652 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 212.326 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 BJD94_20185 dc5850c5432c986e8815509709a97652 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 1.1E-201 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 BJD94_20185 dc5850c5432c986e8815509709a97652 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 4.0E-170 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 1.3E-59 T 14-10-2018 BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 SUPERFAMILY SSF56784 3 264 2.96E-67 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 6.6E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 Gene3D G3DSA:3.30.1240.10 85 190 1.4E-77 T 14-10-2018 BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 2.5E-20 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BJD94_19135 f65aa1792c3ac215b7082cc3f5924695 267 Gene3D G3DSA:3.40.50.1000 9 260 1.4E-77 T 14-10-2018 IPR023214 HAD superfamily BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 137 256 8.6E-15 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 SUPERFAMILY SSF51445 260 620 6.74E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 Gene3D G3DSA:3.30.379.10 132 256 1.3E-19 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 SUPERFAMILY SSF55545 125 259 9.87E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 Gene3D G3DSA:3.20.20.80 258 636 9.9E-136 T 14-10-2018 BJD94_14160 bb7a461a94e2d8edb40481be88b4bbe3 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 1.0E-120 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 SMART SM00283 315 576 7.1E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 Pfam PF00672 HAMP domain 250 297 1.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 SMART SM00304 246 300 9.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 543 6.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 SUPERFAMILY SSF58104 268 577 7.19E-72 T 14-10-2018 BJD94_04600 596f9671871ddd5303fe05b6607413e9 578 Gene3D G3DSA:1.10.287.950 247 578 1.1E-67 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1110.10 158 276 7.4E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.50.100 714 788 3.1E-31 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.7E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.6E-156 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.270.10 1035 1241 2.0E-88 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1110.10 300 438 1.2E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 647 713 2.1E-21 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 439 617 2.9E-65 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1100.10 19 157 3.3E-48 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.293 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 231 1.1E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 7.4E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 14-10-2018 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11955 111e1288efd48ea109d8c6095f811346 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_20985 bc97ef255808833414170a268ae9fa3e 320 SUPERFAMILY SSF53300 94 256 1.89E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20985 bc97ef255808833414170a268ae9fa3e 320 Pfam PF01882 Protein of unknown function DUF58 58 143 6.0E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 BJD94_15430 949d59202f1e004350ee472e77816b46 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 3.2E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 Gene3D G3DSA:3.40.47.10 127 398 4.3E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_15430 949d59202f1e004350ee472e77816b46 404 Pfam PF02803 Thiolase, C-terminal domain 269 401 2.1E-34 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 Pfam PF00108 Thiolase, N-terminal domain 6 259 2.6E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 PIRSF PIRSF000429 1 403 2.1E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 SUPERFAMILY SSF53901 5 268 1.42E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_15430 949d59202f1e004350ee472e77816b46 404 SUPERFAMILY SSF53901 269 401 1.26E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_15430 949d59202f1e004350ee472e77816b46 404 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD94_15430 949d59202f1e004350ee472e77816b46 404 Gene3D G3DSA:3.40.47.10 7 274 4.3E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 39.796 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 Gene3D G3DSA:1.10.287.680 1 53 6.7E-32 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 Gene3D G3DSA:1.10.3190.10 54 166 1.9E-35 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 PIRSF PIRSF006272 1 166 3.3E-76 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 SUPERFAMILY SSF116960 1 166 1.06E-62 T 14-10-2018 BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 Pfam PF03887 YfbU domain 1 166 8.0E-70 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BJD94_01190 7fbf8d4eac68264ead3d856eea421767 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 5.0E-95 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Gene3D G3DSA:3.30.2130.30 6 255 1.2E-135 T 14-10-2018 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 7.0E-62 T 14-10-2018 IPR000241 Putative RNA methylase domain BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 667 1.2E-26 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Gene3D G3DSA:3.40.50.150 169 371 1.2E-135 T 14-10-2018 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 SMART SM00981 56 154 3.3E-20 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Pfam PF02926 THUMP domain 32 153 7.4E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.546 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Gene3D G3DSA:3.40.50.150 488 706 1.5E-74 T 14-10-2018 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 SUPERFAMILY SSF53335 399 706 9.09E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 Gene3D G3DSA:3.30.750.80 396 487 1.2E-35 T 14-10-2018 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 PIRSF PIRSF037618 1 707 5.5E-297 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BJD94_04100 2e93545835154d0c9bc1f070310cb9c0 707 SUPERFAMILY SSF53335 139 371 4.45E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 SMART SM00448 3 114 8.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 SUPERFAMILY SSF46689 318 402 1.39E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Pfam PF14532 Sigma-54 interaction domain 145 244 1.1E-6 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Gene3D G3DSA:1.10.10.60 349 404 5.6E-9 T 14-10-2018 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Gene3D G3DSA:1.10.8.60 283 348 5.1E-12 T 14-10-2018 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Gene3D G3DSA:3.40.50.2300 1 136 1.2E-36 T 14-10-2018 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 SUPERFAMILY SSF52172 5 186 5.83E-39 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Pfam PF02954 Bacterial regulatory protein, Fis family 361 399 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Pfam PF00072 Response regulator receiver domain 6 115 2.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 SUPERFAMILY SSF52540 144 335 5.32E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17765 905f4fe2b1e803eb005bb5afc9eda606 409 Gene3D G3DSA:3.40.50.300 142 282 1.8E-12 T 14-10-2018 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.0E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 Gene3D G3DSA:3.40.50.2300 63 302 6.7E-71 T 14-10-2018 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 Gene3D G3DSA:3.40.50.2300 159 289 6.7E-71 T 14-10-2018 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 SUPERFAMILY SSF53822 61 331 1.68E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 SUPERFAMILY SSF47413 2 58 4.29E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 4.2E-34 T 14-10-2018 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 SMART SM00354 1 71 3.1E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_17690 12585ec8a80ea2e9507fd113bf262a48 336 Gene3D G3DSA:1.10.260.40 1 59 1.5E-19 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 SUPERFAMILY SSF53633 5 291 5.63E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:3.30.360.10 612 782 2.9E-103 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:3.30.70.260 381 443 2.0E-5 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.2E-42 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 4.5E-15 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:1.20.120.1320 44 137 5.7E-75 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 SUPERFAMILY SSF51735 448 623 1.11E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:3.30.70.260 366 380 2.0E-5 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:3.40.50.720 451 799 2.9E-103 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 PIRSF PIRSF000727 5 803 9.2E-300 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.6E-65 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 SUPERFAMILY SSF55347 601 784 5.23E-45 T 14-10-2018 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Pfam PF00696 Amino acid kinase family 5 272 5.9E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_12720 740b67933df92861493f2bc8fc4f56a6 803 Gene3D G3DSA:3.40.1160.10 8 290 5.7E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 Gene3D G3DSA:3.30.260.10 136 410 1.5E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.5E-98 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 524 5.0E-250 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 Gene3D G3DSA:3.50.7.10 192 372 1.5E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 SUPERFAMILY SSF48592 7 521 3.74E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 PRINTS PR00298 60kDa chaperonin signature 27 53 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 PRINTS PR00298 60kDa chaperonin signature 350 375 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 PRINTS PR00298 60kDa chaperonin signature 83 110 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 PRINTS PR00298 60kDa chaperonin signature 398 419 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 PRINTS PR00298 60kDa chaperonin signature 268 291 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 SUPERFAMILY SSF52029 185 376 3.49E-79 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 Gene3D G3DSA:1.10.560.10 8 521 1.5E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 SUPERFAMILY SSF54849 137 203 1.92E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BJD94_17815 62d04c5fe3e3cba2dcb716e3f8fa9e0e 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 532 39.646 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_15380 234f7f1293ff9e72e56985b3c2e382c1 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 240 8.5E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_15380 234f7f1293ff9e72e56985b3c2e382c1 249 Gene3D G3DSA:3.40.190.10 106 203 5.1E-28 T 14-10-2018 BJD94_15380 234f7f1293ff9e72e56985b3c2e382c1 249 SUPERFAMILY SSF53850 22 240 7.12E-36 T 14-10-2018 BJD94_15380 234f7f1293ff9e72e56985b3c2e382c1 249 Gene3D G3DSA:3.40.190.10 33 238 5.1E-28 T 14-10-2018 BJD94_09335 aec23c5737824a19d0d799c5d272b62b 601 Pfam PF00501 AMP-binding enzyme 14 466 4.4E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_09335 aec23c5737824a19d0d799c5d272b62b 601 SUPERFAMILY SSF56801 7 596 1.96E-112 T 14-10-2018 BJD94_09335 aec23c5737824a19d0d799c5d272b62b 601 Gene3D G3DSA:3.40.50.12780 317 459 3.0E-33 T 14-10-2018 BJD94_09335 aec23c5737824a19d0d799c5d272b62b 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_09335 aec23c5737824a19d0d799c5d272b62b 601 Gene3D G3DSA:3.40.50.12780 2 313 2.5E-53 T 14-10-2018 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 Gene3D G3DSA:1.10.300.10 99 200 2.2E-72 T 14-10-2018 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 Gene3D G3DSA:3.90.170.10 266 418 1.6E-51 T 14-10-2018 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 6.8E-132 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 SUPERFAMILY SSF52540 1 417 1.81E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 Gene3D G3DSA:3.40.440.10 6 255 2.2E-72 T 14-10-2018 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 SMART SM00788 3 417 2.4E-177 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_16325 96c3b4ad9df998319e9e740d04c64a1a 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 142.203 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 SUPERFAMILY SSF52317 1 158 7.78E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 PIRSF PIRSF028757 1 330 6.7E-87 T 14-10-2018 IPR003507 Peptidase family S66 BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 Pfam PF02016 LD-carboxypeptidase 13 318 4.7E-72 T 14-10-2018 IPR003507 Peptidase family S66 BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 Gene3D G3DSA:3.40.50.10740 1 163 4.5E-61 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 Gene3D G3DSA:3.50.30.60 165 330 1.4E-46 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BJD94_20360 119f072842435982a79ebdaf2a5af9e5 330 SUPERFAMILY SSF141986 173 324 4.45E-38 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 SMART SM00478 38 185 1.5E-57 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.0E-90 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Gene3D G3DSA:1.10.1670.10 11 203 1.3E-79 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Gene3D G3DSA:1.10.340.30 21 132 1.3E-79 T 14-10-2018 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.31 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 PIRSF PIRSF001435 1 211 1.3E-51 T 14-10-2018 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.5E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 SUPERFAMILY SSF48150 2 207 2.83E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD94_06165 1c8040c0ce9a1c8625f098851e97b545 213 SMART SM00525 186 206 4.4E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Gene3D G3DSA:3.40.50.300 133 313 6.7E-62 T 14-10-2018 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Pfam PF02954 Bacterial regulatory protein, Fis family 451 487 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Gene3D G3DSA:1.10.10.60 445 488 1.3E-7 T 14-10-2018 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 SUPERFAMILY SSF52172 3 186 4.41E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Pfam PF00158 Sigma-54 interaction domain 143 309 2.4E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 SUPERFAMILY SSF46689 439 492 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 SMART SM00382 162 304 9.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Gene3D G3DSA:1.10.8.60 314 394 1.2E-27 T 14-10-2018 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 SMART SM00448 3 114 2.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Gene3D G3DSA:3.40.50.2300 1 132 1.9E-29 T 14-10-2018 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 Pfam PF00072 Response regulator receiver domain 5 114 9.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04230 ded1c92117ca62c38c35e6952b70c477 497 SUPERFAMILY SSF52540 142 385 1.13E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 SUPERFAMILY SSF55486 21 242 7.59E-17 T 14-10-2018 BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 SUPERFAMILY SSF49785 289 408 2.38E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 Gene3D G3DSA:3.40.390.10 17 242 5.7E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 Gene3D G3DSA:2.60.120.260 310 409 4.1E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 190 1.6E-29 T 14-10-2018 BJD94_20325 ba5c7de5eab65d6137e9a9b03ff9a65f 409 Pfam PF01483 Proprotein convertase P-domain 327 407 3.5E-17 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 401 478 8.99E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.0E-29 T 14-10-2018 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF50447 261 399 5.52E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.6E-297 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 600 689 2.34E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.7E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54211 476 596 1.09E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.6E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 3.5E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.230.10 481 684 2.1E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.1E-44 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.240 601 671 2.1E-84 T 14-10-2018 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.40.50.300 1 290 3.9E-101 T 14-10-2018 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 14-10-2018 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.583 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00889 477 595 1.2E-62 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF52540 3 278 1.11E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00838 597 684 2.2E-46 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00679 Elongation factor G C-terminus 597 683 2.0E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_14500 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:2.40.30.10 293 413 5.0E-43 T 14-10-2018 BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 2.4E-125 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 Pfam PF04055 Radical SAM superfamily 117 254 8.2E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 SUPERFAMILY SSF102114 102 324 1.22E-25 T 14-10-2018 BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 PIRSF PIRSF004911 3 340 9.7E-117 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 Gene3D G3DSA:3.20.20.70 51 334 1.6E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 9.0E-157 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like BJD94_12205 a5d056f7a183c70725458d2e91d63950 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 3.8E-7 T 14-10-2018 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.945 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 Gene3D G3DSA:1.20.1440.90 273 387 5.6E-27 T 14-10-2018 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 SUPERFAMILY SSF51621 6 877 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 3.9E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 6.1E-288 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_12735 eaa466cf6c45ac63c60cc2b69d4ed6a5 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 Pfam PF01842 ACT domain 5 52 2.2E-6 T 14-10-2018 IPR002912 ACT domain BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.2E-121 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 SUPERFAMILY SSF55021 4 54 3.12E-8 T 14-10-2018 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 Gene3D G3DSA:3.40.50.170 82 277 3.2E-67 T 14-10-2018 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 Pfam PF00551 Formyl transferase 82 259 2.2E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PIRSF PIRSF036480 1 277 2.5E-111 T 14-10-2018 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 Gene3D G3DSA:3.30.70.260 1 81 7.9E-15 T 14-10-2018 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.652 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD94_06895 d68a8cf279f9c832afe5adbc2e541bad 277 SUPERFAMILY SSF53328 82 276 1.31E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 Gene3D G3DSA:1.10.3210.10 19 197 1.3E-18 T 14-10-2018 BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 SUPERFAMILY SSF109604 25 193 5.03E-14 T 14-10-2018 BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 SUPERFAMILY SSF109604 238 411 1.64E-32 T 14-10-2018 BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 Pfam PF01966 HD domain 248 369 7.8E-18 T 14-10-2018 IPR006674 HD domain BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 SMART SM00471 244 379 1.6E-10 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 SMART SM00471 30 159 21.0 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 Gene3D G3DSA:1.10.3210.10 230 420 2.2E-50 T 14-10-2018 BJD94_02125 3ea4a686c21238aee8b8b3bf8de4fd56 422 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.0E-7 T 14-10-2018 IPR006675 HDIG domain BJD94_06805 f40523480505693474ad75395334cdc2 416 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 284 4.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_06805 f40523480505693474ad75395334cdc2 416 Gene3D G3DSA:1.10.287.130 206 285 3.0E-11 T 14-10-2018 BJD94_06805 f40523480505693474ad75395334cdc2 416 SUPERFAMILY SSF55874 286 406 1.48E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06805 f40523480505693474ad75395334cdc2 416 SMART SM00388 220 286 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_06805 f40523480505693474ad75395334cdc2 416 SUPERFAMILY SSF47384 205 284 4.51E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_06805 f40523480505693474ad75395334cdc2 416 Gene3D G3DSA:3.30.565.10 293 415 1.2E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 9.2E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 528 9.2E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 Gene3D G3DSA:3.30.450.20 64 174 1.1E-26 T 14-10-2018 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 SMART SM00304 303 357 3.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 Pfam PF02743 Cache domain 34 265 3.2E-22 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 Gene3D G3DSA:1.10.287.950 304 635 4.1E-67 T 14-10-2018 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 Gene3D G3DSA:3.30.450.20 56 276 1.1E-26 T 14-10-2018 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 SMART SM00283 372 633 2.7E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 SUPERFAMILY SSF103190 118 185 5.23E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 SUPERFAMILY SSF58104 325 634 5.1E-72 T 14-10-2018 BJD94_20460 9ad3b0114f6437289ee2c90969c0c4e9 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 600 3.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_14215 04853fac7f778f550825a25c854d7664 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_14215 04853fac7f778f550825a25c854d7664 431 Pfam PF00202 Aminotransferase class-III 33 395 1.8E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_14215 04853fac7f778f550825a25c854d7664 431 Gene3D G3DSA:3.40.640.10 69 317 9.6E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_14215 04853fac7f778f550825a25c854d7664 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.087 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BJD94_14215 04853fac7f778f550825a25c854d7664 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 2.8E-193 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BJD94_14215 04853fac7f778f550825a25c854d7664 431 Gene3D G3DSA:3.90.1150.10 6 418 9.6E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_14215 04853fac7f778f550825a25c854d7664 431 SUPERFAMILY SSF53383 1 423 4.61E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.651 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 235 2.1E-64 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 SUPERFAMILY SSF53633 8 262 4.68E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 Pfam PF00696 Amino acid kinase family 9 231 2.9E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 Gene3D G3DSA:3.40.1160.10 5 260 1.6E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_12750 da7bdccc99071d7019167dd3a0db39d4 263 PIRSF PIRSF000728 2 262 1.4E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 Gene3D G3DSA:1.10.10.10 1 90 9.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 Pfam PF03466 LysR substrate binding domain 88 289 4.5E-34 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 Gene3D G3DSA:3.40.190.10 91 285 9.9E-29 T 14-10-2018 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 SUPERFAMILY SSF46785 1 79 3.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 SUPERFAMILY SSF53850 88 290 1.45E-31 T 14-10-2018 BJD94_11315 1c1d5f67fca9f55b6b1c903ee840c361 296 Gene3D G3DSA:3.40.190.10 165 265 9.9E-29 T 14-10-2018 BJD94_06200 73382ebc176d9d158230716e0baf8fc4 112 Gene3D G3DSA:3.40.30.10 2 106 2.7E-31 T 14-10-2018 BJD94_06200 73382ebc176d9d158230716e0baf8fc4 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.7E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related BJD94_06200 73382ebc176d9d158230716e0baf8fc4 112 Pfam PF00462 Glutaredoxin 16 80 3.5E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_06200 73382ebc176d9d158230716e0baf8fc4 112 PIRSF PIRSF005894 1 107 3.7E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 BJD94_06200 73382ebc176d9d158230716e0baf8fc4 112 SUPERFAMILY SSF52833 1 104 2.53E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 Pfam PF00664 ABC transporter transmembrane region 25 292 5.4E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 SUPERFAMILY SSF90123 12 330 3.92E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 Pfam PF00005 ABC transporter 368 512 2.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 SMART SM00382 375 566 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 Gene3D G3DSA:1.20.1560.10 2 333 5.6E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 Gene3D G3DSA:3.40.50.300 342 593 6.6E-68 T 14-10-2018 BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 SUPERFAMILY SSF52540 357 579 1.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04900 ff5da42731ecb37082c3ff703cbfc655 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 8.4E-176 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BJD94_10280 ac4b165386fb9165f07f8cdac787a454 144 PIRSF PIRSF029598 6 138 2.3E-39 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 BJD94_10280 ac4b165386fb9165f07f8cdac787a454 144 Pfam PF06146 Phosphate-starvation-inducible E 54 120 1.9E-14 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like BJD94_01400 194604fd6f2bbd33ed2b2323c7a5a3e2 269 Pfam PF13847 Methyltransferase domain 53 160 7.4E-12 T 14-10-2018 IPR025714 Methyltransferase domain BJD94_01400 194604fd6f2bbd33ed2b2323c7a5a3e2 269 Gene3D G3DSA:3.40.50.150 15 269 8.2E-57 T 14-10-2018 BJD94_01400 194604fd6f2bbd33ed2b2323c7a5a3e2 269 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 9 265 40.63 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 BJD94_01400 194604fd6f2bbd33ed2b2323c7a5a3e2 269 SUPERFAMILY SSF53335 12 257 1.25E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_09545 480d699968dbb75a5e5732500c592b15 241 Gene3D G3DSA:3.40.50.300 2 241 1.7E-71 T 14-10-2018 BJD94_09545 480d699968dbb75a5e5732500c592b15 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_09545 480d699968dbb75a5e5732500c592b15 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.4E-126 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 BJD94_09545 480d699968dbb75a5e5732500c592b15 241 SUPERFAMILY SSF52540 3 237 2.43E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09545 480d699968dbb75a5e5732500c592b15 241 SMART SM00382 28 202 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09545 480d699968dbb75a5e5732500c592b15 241 Pfam PF00005 ABC transporter 20 166 5.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_09545 480d699968dbb75a5e5732500c592b15 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.4E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 Gene3D G3DSA:3.30.450.20 9 147 8.3E-25 T 14-10-2018 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 SMART SM00091 5 72 0.0059 T 14-10-2018 IPR000014 PAS domain BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 267 296 2.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 109 8.1E-10 T 14-10-2018 IPR000014 PAS domain BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 SUPERFAMILY SSF55785 17 112 1.42E-24 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 5.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 SMART SM00283 256 514 2.7E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 Pfam PF08447 PAS fold 28 112 1.5E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 Gene3D G3DSA:1.10.287.950 194 514 4.3E-62 T 14-10-2018 BJD94_21820 dae2bc90afca38faa2c14095f9171312 514 SUPERFAMILY SSF58104 259 513 8.63E-70 T 14-10-2018 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 SUPERFAMILY SSF51161 296 396 2.51E-18 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 6.6E-154 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 Gene3D G3DSA:3.90.550.10 1 281 5.6E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 SUPERFAMILY SSF53448 3 358 3.99E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 Pfam PF00483 Nucleotidyl transferase 6 272 8.4E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.668 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 Gene3D G3DSA:2.160.10.10 282 403 1.3E-32 T 14-10-2018 BJD94_21255 afcf323e6547a78555a19be1d7ec7513 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 214 35.244 T 14-10-2018 IPR007432 Protein of unknown function DUF480 BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 SUPERFAMILY SSF46785 3 84 3.4E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 Gene3D G3DSA:1.10.10.10 95 175 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 Gene3D G3DSA:1.10.10.10 1 90 9.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 SUPERFAMILY SSF46785 90 174 8.16E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16190 611457e2278f9474321f76b4cf35b05c 220 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.6E-65 T 14-10-2018 IPR007432 Protein of unknown function DUF480 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 325 7.1E-56 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 SUPERFAMILY SSF55347 164 326 2.8E-59 T 14-10-2018 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 Gene3D G3DSA:3.30.360.10 163 327 5.9E-127 T 14-10-2018 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 Gene3D G3DSA:3.40.50.720 3 337 5.9E-127 T 14-10-2018 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 121 134 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 SMART SM00846 2 164 1.3E-64 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 2.5E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 SUPERFAMILY SSF51735 2 188 1.89E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 346 66.386 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 PIRSF PIRSF000149 1 346 1.6E-125 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13555 3f375e036d51ce11db02d643d4f08f63 346 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 337 3.3E-191 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 Pfam PF02833 DHHA2 domain 180 297 3.6E-14 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 SMART SM01131 178 300 3.2E-30 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 Gene3D G3DSA:3.10.310.20 188 300 2.1E-20 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 Gene3D G3DSA:3.90.1640.10 1 186 4.6E-64 T 14-10-2018 BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 SUPERFAMILY SSF64182 1 297 8.24E-67 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily BJD94_05240 b660721f28d50b49ba38e5cce985e84d 301 Pfam PF01368 DHH family 2 142 8.6E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD94_02200 2634650b564378cd409ddff4b3a66630 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 40 113 3.6E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BJD94_02200 2634650b564378cd409ddff4b3a66630 191 Pfam PF10531 SLBB domain 119 162 2.4E-12 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_02200 2634650b564378cd409ddff4b3a66630 191 Gene3D G3DSA:3.30.1950.10 46 117 5.3E-22 T 14-10-2018 BJD94_02200 2634650b564378cd409ddff4b3a66630 191 Gene3D G3DSA:3.10.560.10 27 186 5.3E-22 T 14-10-2018 BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 Gene3D G3DSA:3.90.79.10 26 169 1.9E-13 T 14-10-2018 BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 ProSitePatterns PS00893 Nudix box signature. 66 87 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 SUPERFAMILY SSF48317 192 360 5.56E-6 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 SUPERFAMILY SSF55811 39 147 5.01E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 Pfam PF01569 PAP2 superfamily 248 361 1.7E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_04510 c7c77cb330da85ecce8aed5e4a696e8f 479 Pfam PF00293 NUDIX domain 40 132 2.5E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_16280 5a90ff3357dd021699d207c565291325 214 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 4.6E-7 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_16280 5a90ff3357dd021699d207c565291325 214 SMART SM00863 166 208 1.3E-7 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_16280 5a90ff3357dd021699d207c565291325 214 SUPERFAMILY SSF50447 1 83 4.59E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_16280 5a90ff3357dd021699d207c565291325 214 Gene3D G3DSA:3.30.980.10 84 212 2.5E-27 T 14-10-2018 BJD94_16280 5a90ff3357dd021699d207c565291325 214 Gene3D G3DSA:2.40.30.130 1 83 6.8E-18 T 14-10-2018 BJD94_16280 5a90ff3357dd021699d207c565291325 214 SUPERFAMILY SSF55186 84 209 1.31E-26 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD94_16280 5a90ff3357dd021699d207c565291325 214 Pfam PF01411 tRNA synthetases class II (A) 15 87 4.3E-8 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BJD94_07320 9166f69cf909c52eeaf76b911418959b 248 SMART SM00858 126 188 8.1E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD94_07320 9166f69cf909c52eeaf76b911418959b 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 3.1E-47 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BJD94_07320 9166f69cf909c52eeaf76b911418959b 248 Gene3D G3DSA:2.30.30.760 188 248 9.3E-12 T 14-10-2018 BJD94_07320 9166f69cf909c52eeaf76b911418959b 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.1E-37 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 162 179 7.0E-5 T 14-10-2018 BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 180 199 7.0E-5 T 14-10-2018 BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 220 7.0E-5 T 14-10-2018 BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 Gene3D G3DSA:3.30.1330.60 79 221 1.5E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 SUPERFAMILY SSF103088 105 220 1.44E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 Pfam PF13488 Glycine zipper 38 85 3.9E-12 T 14-10-2018 IPR039567 Glycine zipper domain BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 Pfam PF00691 OmpA family 117 211 2.1E-18 T 14-10-2018 IPR006665 OmpA-like domain BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 162 178 8.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 117 139 8.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_02565 54ca67ad3da92f8c75f290705025e9fe 221 PRINTS PR01021 OMPA domain signature 147 162 8.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 Gene3D G3DSA:3.30.930.10 1 203 1.0E-64 T 14-10-2018 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 4.0E-25 T 14-10-2018 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.567 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 6.2E-72 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 2.9E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 PIRSF PIRSF016262 1 217 6.4E-63 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07655 6689c393b40bed091c93f7cb7538e05a 218 SUPERFAMILY SSF55681 3 205 1.57E-71 T 14-10-2018 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 SMART SM01390 3 95 6.4E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 SMART SM00363 96 160 8.9E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:1.10.1050.10 1 102 1.4E-44 T 14-10-2018 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.3 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:3.10.290.10 103 191 1.1E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 SUPERFAMILY SSF55174 3 206 1.83E-72 T 14-10-2018 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.6E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09760 cfb35c2928f81406c567ef4683af5262 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.6E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.0E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 Gene3D G3DSA:3.30.1320.10 1 82 1.8E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 SUPERFAMILY SSF54565 1 76 2.62E-27 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-22 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_13935 2dacc31f60680994300ac18093cebc3c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.804 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 SMART SM00421 145 202 1.5E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 SUPERFAMILY SSF46894 130 204 8.84E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 Gene3D G3DSA:3.40.50.12740 4 206 9.9E-65 T 14-10-2018 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 SMART SM00448 4 117 2.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 SUPERFAMILY SSF52172 5 133 4.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 Pfam PF00072 Response regulator receiver domain 6 117 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16065 b3fc80d1474cd89140396b2be3262d4b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 SUPERFAMILY SSF51905 1 395 1.07E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 Gene3D G3DSA:3.50.50.60 8 389 2.6E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.2E-8 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.2E-8 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-8 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 SUPERFAMILY SSF160996 191 339 1.16E-42 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 Gene3D G3DSA:1.10.8.260 263 323 2.6E-132 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 Gene3D G3DSA:2.40.30.10 189 340 2.6E-132 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 4.3E-6 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.3E-6 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.3E-6 T 14-10-2018 BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 5.2E-132 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BJD94_11535 5a12224b362cdc93ffdbab969b0265fd 395 Pfam PF03486 HI0933-like protein 5 393 6.2E-156 T 14-10-2018 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Pfam PF13180 PDZ domain 269 358 7.7E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 7.2E-165 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 4.2E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Gene3D G3DSA:2.40.10.120 37 261 1.4E-85 T 14-10-2018 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Gene3D G3DSA:2.30.42.10 362 455 7.5E-27 T 14-10-2018 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 SMART SM00228 374 447 1.3E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 SMART SM00228 267 349 6.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Gene3D G3DSA:2.30.42.10 265 361 1.2E-27 T 14-10-2018 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 SUPERFAMILY SSF50156 381 452 4.47E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 3.6E-31 T 14-10-2018 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 SUPERFAMILY SSF50494 11 275 1.35E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_09010 d2f8217e4ba0cfaefd2259319fc0df8e 455 SUPERFAMILY SSF50156 233 350 8.25E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 Gene3D G3DSA:3.30.1130.10 85 217 1.2E-51 T 14-10-2018 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.2E-79 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 Gene3D G3DSA:1.10.286.10 1 84 2.1E-37 T 14-10-2018 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 SUPERFAMILY SSF55620 9 216 4.37E-74 T 14-10-2018 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 Pfam PF01227 GTP cyclohydrolase I 38 215 4.5E-64 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD94_15660 ed3bde2a69dd46226fec60c030b26566 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.797 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD94_09035 2d84b5fbc13dada1d40a98afe7146f4d 274 Gene3D G3DSA:3.60.21.10 2 267 4.2E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_09035 2d84b5fbc13dada1d40a98afe7146f4d 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 3.0E-27 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 BJD94_09035 2d84b5fbc13dada1d40a98afe7146f4d 274 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 5.4E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_09035 2d84b5fbc13dada1d40a98afe7146f4d 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 42.89 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 BJD94_09035 2d84b5fbc13dada1d40a98afe7146f4d 274 SUPERFAMILY SSF56300 14 271 3.01E-56 T 14-10-2018 BJD94_06770 529efb1097ce407ce582e5740eac5cf2 769 SUPERFAMILY SSF82866 637 763 5.36E-22 T 14-10-2018 BJD94_06770 529efb1097ce407ce582e5740eac5cf2 769 Pfam PF03176 MMPL family 180 399 1.5E-15 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BJD94_06770 529efb1097ce407ce582e5740eac5cf2 769 Gene3D G3DSA:1.20.1640.10 602 712 1.1E-6 T 14-10-2018 BJD94_06770 529efb1097ce407ce582e5740eac5cf2 769 SUPERFAMILY SSF82866 193 398 7.98E-19 T 14-10-2018 BJD94_14690 16a28866e224fd6ef8f482c20c34eba1 366 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 1.7E-17 T 14-10-2018 IPR000182 GNAT domain BJD94_14690 16a28866e224fd6ef8f482c20c34eba1 366 Gene3D G3DSA:3.40.630.30 1 149 4.8E-32 T 14-10-2018 BJD94_14690 16a28866e224fd6ef8f482c20c34eba1 366 SUPERFAMILY SSF55729 1 147 7.26E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_14690 16a28866e224fd6ef8f482c20c34eba1 366 Pfam PF11814 Peptidase_C39 like family 157 359 4.5E-80 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 8.2E-109 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.5E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Gene3D G3DSA:3.10.150.10 124 247 4.1E-37 T 14-10-2018 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 SUPERFAMILY SSF55979 245 366 1.47E-35 T 14-10-2018 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 SUPERFAMILY SSF55979 1 118 1.48E-29 T 14-10-2018 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.4E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 PIRSF PIRSF000804 1 366 4.4E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 SMART SM00480 17 362 2.3E-147 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 SUPERFAMILY SSF55979 126 244 2.06E-28 T 14-10-2018 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.7E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Gene3D G3DSA:3.10.150.10 1 122 2.9E-42 T 14-10-2018 BJD94_11175 9eeb1b5c3168fc98904e1dbd770763aa 366 Gene3D G3DSA:3.10.150.10 248 366 1.1E-38 T 14-10-2018 BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 Gene3D G3DSA:3.100.10.10 70 144 5.1E-13 T 14-10-2018 BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.018 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.2E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 SUPERFAMILY SSF52080 4 143 4.71E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BJD94_09785 53cb1432ef5b20470731faa13e159d32 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.6E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 9.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 SUPERFAMILY SSF46785 10 117 1.92E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 SUPERFAMILY SSF53850 94 301 1.99E-38 T 14-10-2018 BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 Gene3D G3DSA:3.40.190.10 169 272 4.5E-58 T 14-10-2018 BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 Pfam PF03466 LysR substrate binding domain 94 300 1.8E-39 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 Gene3D G3DSA:1.10.10.10 9 97 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18935 81bd8d887c51a251c4c6243abec72d8f 304 Gene3D G3DSA:3.40.190.10 98 298 4.5E-58 T 14-10-2018 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 Gene3D G3DSA:3.20.20.60 6 341 1.7E-154 T 14-10-2018 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 SUPERFAMILY SSF52935 329 480 1.09E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 3.8E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.4E-130 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 SUPERFAMILY SSF51621 4 345 9.81E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 5.1E-167 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 Gene3D G3DSA:2.40.33.10 74 172 1.7E-154 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 Gene3D G3DSA:3.40.1380.20 342 476 1.7E-154 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_05650 468991a206caf5ccae93bdebbc47647e 482 SUPERFAMILY SSF50800 74 169 7.5E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:2.60.120.260 1460 1599 1.2E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:1.20.140.180 3584 3724 6.1E-60 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF11713 Peptidase C80 family 4115 4272 5.6E-53 T 14-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF158842 3577 3850 1.44E-105 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 141 157 0.017 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1084 1099 0.28 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 969 981 9.4 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 836 852 0.23 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1255 1272 2.2 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 101 118 0.62 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1107 1119 7.0 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 988 1003 0.13 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1198 1214 0.0036 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 275 291 0.58 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1028 1040 0.43 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 855 872 0.53 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 950 965 0.16 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1181 1196 0.017 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 893 907 4.3 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 779 793 0.96 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 912 929 0.71 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1217 1233 3.7 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 798 813 0.056 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 641 655 4.2 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1122 1139 0.1 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1160 1176 0.048 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 601 617 8.8 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 738 751 0.16 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 817 832 0.089 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 756 766 5.0 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1064 1076 6.0 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 161 182 3.3 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 931 947 10.0 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 187 204 0.36 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 874 888 0.21 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1141 1156 0.57 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 207 224 0.43 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 621 638 0.052 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 581 597 1.3 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 255 272 3.7 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 1293 1310 0.0083 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF07634 RtxA repeat 121 138 0.015 T 14-10-2018 IPR011509 RtxA toxin BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF12146 Serine aminopeptidase, S33 2994 3108 8.9E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:3.40.50.1820 2936 3150 1.1E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF51120 4924 5130 2.88E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:1.20.58.1190 2373 2463 1.4E-24 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF51120 4839 4933 3.79E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:3.40.50.11550 3827 4077 6.0E-97 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:3.40.50.11050 4078 4296 1.5E-91 T 14-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF159501 3852 4074 6.8E-75 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF11647 Membrane Localization Domain 3591 3654 7.2E-22 T 14-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Pfam PF11647 Membrane Localization Domain 2377 2446 4.0E-25 T 14-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF158842 2361 2604 5.49E-61 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 Gene3D G3DSA:2.160.20.160 4807 5083 5.0E-18 T 14-10-2018 BJD94_15350 f763fc98814105bda2e086918a6f5a69 5203 SUPERFAMILY SSF53474 2990 3105 1.76E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_13945 8710cea2f0a660826a753362f383da07 249 Gene3D G3DSA:3.40.1280.10 1 160 2.8E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_13945 8710cea2f0a660826a753362f383da07 249 Gene3D G3DSA:1.10.1270.20 161 249 3.1E-36 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD94_13945 8710cea2f0a660826a753362f383da07 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.6E-71 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD94_13945 8710cea2f0a660826a753362f383da07 249 PIRSF PIRSF000386 1 248 2.1E-102 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD94_13945 8710cea2f0a660826a753362f383da07 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.4E-110 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD94_13945 8710cea2f0a660826a753362f383da07 249 SUPERFAMILY SSF75217 1 246 1.9E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_13945 8710cea2f0a660826a753362f383da07 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 119.473 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50465 298 393 2.19E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.0E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 206 334 3.3E-52 T 14-10-2018 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 338 393 5.9E-29 T 14-10-2018 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:3.40.50.300 1 203 2.3E-69 T 14-10-2018 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.588 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_11920 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.5E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 3.9E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 SMART SM00155 397 424 1.9E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 SMART SM00155 219 246 4.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Gene3D G3DSA:3.30.870.10 116 307 3.6E-37 T 14-10-2018 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 SUPERFAMILY SSF56024 273 469 3.36E-47 T 14-10-2018 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 4.1E-150 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Gene3D G3DSA:3.30.870.10 314 460 5.7E-24 T 14-10-2018 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 SUPERFAMILY SSF56024 66 313 6.5E-50 T 14-10-2018 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Pfam PF13091 PLD-like domain 134 266 8.8E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Pfam PF13091 PLD-like domain 325 448 1.2E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_05150 46075e67516373a643a8d8a20fc9692a 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.642 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 Pfam PF13567 Domain of unknown function (DUF4131) 27 173 3.9E-9 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 SUPERFAMILY SSF56281 496 729 1.03E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 SMART SM00849 505 687 1.1E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 Pfam PF00753 Metallo-beta-lactamase superfamily 503 684 1.4E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 405 1.2E-26 T 14-10-2018 IPR004477 ComEC/Rec2-related protein BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 714 1.3E-117 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 Gene3D G3DSA:3.60.15.10 494 733 3.2E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_01145 458c3b8709be3d34aacc6f23bf9653f6 749 Pfam PF03772 Competence protein 208 467 6.8E-53 T 14-10-2018 IPR004477 ComEC/Rec2-related protein BJD94_11265 cf1f9ce510d4125e650277372e9016bc 485 Pfam PF02386 Cation transport protein 39 477 3.7E-91 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BJD94_11265 cf1f9ce510d4125e650277372e9016bc 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.9E-116 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BJD94_11265 cf1f9ce510d4125e650277372e9016bc 485 PIRSF PIRSF006247 1 485 1.7E-177 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BJD94_08320 c21221188583a09b5f6a213ca38e977a 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.489 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD94_08320 c21221188583a09b5f6a213ca38e977a 250 Gene3D G3DSA:3.20.20.380 3 249 1.6E-86 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD94_08320 c21221188583a09b5f6a213ca38e977a 250 Pfam PF03932 CutC family 4 205 2.8E-84 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD94_08320 c21221188583a09b5f6a213ca38e977a 250 SUPERFAMILY SSF110395 4 247 3.14E-71 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 TIGRFAM TIGR01230 agmatinase: agmatinase 26 299 2.8E-92 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 SUPERFAMILY SSF52768 12 303 8.82E-94 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 PIRSF PIRSF036979 12 305 3.5E-95 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 Gene3D G3DSA:3.40.800.10 1 308 1.4E-103 T 14-10-2018 BJD94_02435 5e498b6deaf65c5ff035b103f8183ae3 311 Pfam PF00491 Arginase family 33 298 1.4E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 PIRSF PIRSF039144 1 112 1.8E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 23 41 9.0E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 52 75 9.0E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 2 17 9.0E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 PRINTS PR00340 P-II protein signature 83 103 9.0E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 SMART SM00938 4 105 2.7E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 SUPERFAMILY SSF54913 1 112 2.83E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD94_14125 028b76a7df8b0bd8cb965de1d95f642e 112 Gene3D G3DSA:3.30.70.120 1 112 6.1E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 Gene3D G3DSA:3.40.800.10 5 336 9.4E-130 T 14-10-2018 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 44.463 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 Pfam PF00491 Arginase family 46 325 5.2E-62 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 SUPERFAMILY SSF52768 13 332 5.04E-85 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 8.0E-117 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BJD94_02610 c3336346ba7fe733169e5be2bc08c076 336 PIRSF PIRSF036979 28 333 8.5E-25 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 722 1.7E-42 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 SUPERFAMILY SSF52540 539 715 6.04E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 Pfam PF13614 AAA domain 552 669 1.3E-10 T 14-10-2018 IPR025669 AAA domain BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 1.1E-7 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 Pfam PF02706 Chain length determinant protein 21 106 8.8E-10 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BJD94_19770 5e1eb655e09d42d3d480dce0990da3cb 726 Gene3D G3DSA:3.40.50.300 462 726 3.7E-68 T 14-10-2018 BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 SUPERFAMILY SSF46785 1 75 7.58E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 SUPERFAMILY SSF53850 85 294 4.34E-40 T 14-10-2018 BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 Gene3D G3DSA:1.10.10.10 1 83 7.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 Pfam PF03466 LysR substrate binding domain 91 294 1.2E-20 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 Gene3D G3DSA:3.40.190.10 168 266 1.8E-49 T 14-10-2018 BJD94_17550 9a630229e357a32ffa7c5c97cfcb06cc 302 Gene3D G3DSA:3.40.190.10 85 289 1.8E-49 T 14-10-2018 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 Gene3D G3DSA:1.10.287.950 85 373 2.7E-34 T 14-10-2018 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 SUPERFAMILY SSF58104 101 346 5.1E-37 T 14-10-2018 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 314 1.3E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 SMART SM00283 95 366 6.0E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 222 251 1.0E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17905 c66f4ead47c4e0a8756e363041275bd6 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 220 1.0E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 SUPERFAMILY SSF51055 347 392 3.27E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 Gene3D G3DSA:2.10.10.20 350 393 1.3E-17 T 14-10-2018 BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 Gene3D G3DSA:2.70.50.50 26 219 5.6E-63 T 14-10-2018 BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 3.5E-35 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 SUPERFAMILY SSF81296 26 216 7.84E-48 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18375 dbb750e9e90e97255106b1f88c30f158 393 SMART SM00495 350 392 8.5E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 SMART SM00363 20 79 1.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 Pfam PF01479 S4 domain 20 66 5.9E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 Gene3D G3DSA:3.10.290.10 8 75 6.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 Gene3D G3DSA:3.30.2350.10 93 315 4.1E-81 T 14-10-2018 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 SUPERFAMILY SSF55174 19 71 3.27E-9 T 14-10-2018 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 2.5E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 SUPERFAMILY SSF55120 96 312 2.72E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05750 8d06722848620303a97e4bddb07255e9 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 9.7E-93 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 SUPERFAMILY SSF52733 3 341 7.06E-114 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 36.341 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 Gene3D G3DSA:1.10.1610.10 13 340 1.2E-121 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 Pfam PF02277 Phosphoribosyltransferase 2 340 5.2E-128 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 5.7E-129 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD94_04800 8da3fa6c98007403361cfd5b40d72d55 342 Gene3D G3DSA:3.40.50.10210 51 323 1.2E-121 T 14-10-2018 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Pfam PF00158 Sigma-54 interaction domain 136 303 1.7E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Pfam PF02954 Bacterial regulatory protein, Fis family 443 483 2.4E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 SUPERFAMILY SSF52172 6 178 2.57E-5 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 SUPERFAMILY SSF52540 136 377 7.29E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Gene3D G3DSA:1.10.8.60 308 384 2.9E-25 T 14-10-2018 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 2.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 2.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Gene3D G3DSA:3.40.50.2300 1 116 8.0E-11 T 14-10-2018 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Gene3D G3DSA:1.10.10.60 391 485 9.2E-13 T 14-10-2018 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Gene3D G3DSA:3.40.50.300 124 307 1.9E-67 T 14-10-2018 BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 SMART SM00382 156 300 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 4.0E-29 T 14-10-2018 IPR010518 Flagellar regulatory FleQ BJD94_00570 ba06dee20855084e05b51d10f3112bc4 487 SUPERFAMILY SSF46689 348 485 4.26E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Gene3D G3DSA:3.40.50.720 1 208 4.7E-87 T 14-10-2018 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.988 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Gene3D G3DSA:1.10.1040.10 209 494 2.5E-121 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 5.6E-125 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 210 341 4.08E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 6.1E-60 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF51735 27 209 7.05E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.2E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.4E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD94_11320 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 348 487 1.87E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 SUPERFAMILY SSF54980 139 202 4.17E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 198 5.7E-12 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 6.8E-27 T 14-10-2018 IPR001498 Impact, N-terminal BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 Gene3D G3DSA:3.30.230.30 2 136 1.1E-49 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 SUPERFAMILY SSF54211 5 134 4.17E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_11260 82405a79be4a5fd29a288d37cea79b37 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 199 3.9E-68 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 4.6E-101 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 SMART SM01340 212 330 1.7E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 SUPERFAMILY SSF118116 479 662 2.75E-37 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Gene3D G3DSA:3.30.1370.100 524 617 9.4E-55 T 14-10-2018 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 SMART SM00853 483 625 4.3E-19 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Gene3D G3DSA:3.30.565.10 1 216 4.4E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 663 25.302 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Gene3D G3DSA:3.30.230.10 217 329 8.3E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 SUPERFAMILY SSF55874 1 204 2.62E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 9.1E-12 T 14-10-2018 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Pfam PF08676 MutL C terminal dimerisation domain 480 619 1.8E-30 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 SUPERFAMILY SSF54211 191 330 8.34E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Gene3D G3DSA:2.30.42.20 480 661 9.4E-55 T 14-10-2018 BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site BJD94_12390 29b835aa2983197f2fff5fd44443c809 664 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.6E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 Pfam PF03481 Putative GTP-binding controlling metal-binding 197 317 2.9E-16 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 Pfam PF01300 Telomere recombination 19 195 1.6E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 203 7.3E-60 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 SUPERFAMILY SSF55821 13 207 3.66E-62 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 PIRSF PIRSF004930 2 320 5.0E-112 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 Gene3D G3DSA:3.40.50.11030 212 320 1.3E-9 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily BJD94_08085 d7d5ab4519b47b9ab69333084bb7af1d 320 Gene3D G3DSA:3.90.870.10 4 211 2.5E-78 T 14-10-2018 BJD94_00495 8ad0349abd04ea5ef5d0c34fea475436 233 SUPERFAMILY SSF55166 19 176 6.28E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_00495 8ad0349abd04ea5ef5d0c34fea475436 233 Gene3D G3DSA:3.30.1380.10 1 187 8.0E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_00495 8ad0349abd04ea5ef5d0c34fea475436 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 179 3.4E-35 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 318 4.9E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 6.0E-7 T 14-10-2018 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 6.0E-7 T 14-10-2018 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.0E-7 T 14-10-2018 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 SUPERFAMILY SSF51905 150 332 2.63E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_01100 428605719b5fef240c8db92113ce8a18 414 Gene3D G3DSA:3.50.50.100 1 391 1.5E-106 T 14-10-2018 BJD94_01100 428605719b5fef240c8db92113ce8a18 414 SUPERFAMILY SSF51905 13 204 7.77E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 Pfam PF00672 HAMP domain 211 257 1.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 501 2.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 SMART SM01049 35 127 8.1E-31 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 1.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 1.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 SMART SM00304 209 261 7.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 Gene3D G3DSA:3.30.450.20 37 183 5.0E-44 T 14-10-2018 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 Pfam PF17200 Single Cache domain 2 41 183 1.8E-39 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 SMART SM00283 276 537 1.1E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 SUPERFAMILY SSF58104 229 538 5.36E-68 T 14-10-2018 BJD94_21750 8d989f4066b8a36333ee26a2b87e94f8 538 Gene3D G3DSA:1.10.287.950 208 538 8.0E-68 T 14-10-2018 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 1.2E-125 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.835 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Gene3D G3DSA:1.20.140.160 131 283 2.6E-14 T 14-10-2018 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 7.7E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 SUPERFAMILY SSF88659 199 281 9.16E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Pfam PF04545 Sigma-70, region 4 229 279 9.1E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 PIRSF PIRSF000770 5 284 5.9E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 5.4E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 Gene3D G3DSA:1.10.601.10 12 122 1.4E-26 T 14-10-2018 BJD94_11715 6d363c7aaa53e64e9df6e9e2a1515b11 285 SUPERFAMILY SSF88946 11 122 2.22E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_10995 c49da3f934a1f4637aa9a189ab5bead4 201 SUPERFAMILY SSF52833 22 199 5.74E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_10995 c49da3f934a1f4637aa9a189ab5bead4 201 Gene3D G3DSA:3.40.30.10 18 200 3.7E-54 T 14-10-2018 BJD94_10995 c49da3f934a1f4637aa9a189ab5bead4 201 Pfam PF01323 DSBA-like thioredoxin domain 42 189 2.5E-29 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BJD94_10995 c49da3f934a1f4637aa9a189ab5bead4 201 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_10995 c49da3f934a1f4637aa9a189ab5bead4 201 PIRSF PIRSF001488 1 201 1.7E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 96 2.3E-9 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 SUPERFAMILY SSF51011 565 657 8.63E-15 T 14-10-2018 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 Gene3D G3DSA:3.20.20.80 125 558 2.3E-139 T 14-10-2018 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 SUPERFAMILY SSF51445 121 551 7.18E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 SUPERFAMILY SSF81296 16 132 1.06E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 Pfam PF00128 Alpha amylase, catalytic domain 209 261 3.8E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 SMART SM00642 158 548 9.6E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 16 637 1.9E-198 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 Gene3D G3DSA:2.60.40.10 3 123 1.2E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18180 3a759b681a3eb4ab8764a9aaa2aa1125 670 Gene3D G3DSA:2.60.40.1180 564 656 1.3E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_10300 aa24de8c993bbfd157a35d0329ae2f71 608 SUPERFAMILY SSF53850 41 557 6.98E-92 T 14-10-2018 BJD94_10300 aa24de8c993bbfd157a35d0329ae2f71 608 Gene3D G3DSA:3.10.105.10 316 542 4.9E-42 T 14-10-2018 BJD94_10300 aa24de8c993bbfd157a35d0329ae2f71 608 PIRSF PIRSF002741 2 564 8.1E-64 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_10300 aa24de8c993bbfd157a35d0329ae2f71 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 1.7E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_10300 aa24de8c993bbfd157a35d0329ae2f71 608 Gene3D G3DSA:3.40.190.10 14 315 8.6E-40 T 14-10-2018 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 6.5E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 6.5E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 6.5E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.6E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_06440 dac91166251c2f179cdca27177024ec7 153 Gene3D G3DSA:3.30.70.920 55 139 2.2E-22 T 14-10-2018 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 Gene3D G3DSA:1.10.10.10 3 54 8.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_06440 dac91166251c2f179cdca27177024ec7 153 SUPERFAMILY SSF54909 62 151 2.15E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_06440 dac91166251c2f179cdca27177024ec7 153 SMART SM00344 2 111 4.5E-44 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD94_06440 dac91166251c2f179cdca27177024ec7 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 3.7E-15 T 14-10-2018 BJD94_06440 dac91166251c2f179cdca27177024ec7 153 SUPERFAMILY SSF46785 2 91 6.53E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 Gene3D G3DSA:3.30.70.270 191 367 1.4E-50 T 14-10-2018 BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 SUPERFAMILY SSF47188 3 131 2.35E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 Gene3D G3DSA:1.20.120.50 2 136 2.5E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 5.0E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 9.0E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 5.1E-8 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 SMART SM00267 195 367 3.9E-49 T 14-10-2018 IPR000160 GGDEF domain BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 SUPERFAMILY SSF55073 211 365 4.47E-43 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 BJD94_02500 d49cfb4267f105a6b0ac6db428cf02f7 371 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 3.2E-31 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 Gene3D G3DSA:1.10.150.240 16 95 1.2E-61 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 SUPERFAMILY SSF56784 2 222 9.3E-50 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 195 1.2E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.2E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.1E-80 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 194 2.8E-21 T 14-10-2018 BJD94_20140 0de70a5106c4da674e00e2a1c98f230e 224 Gene3D G3DSA:3.40.50.1000 5 218 1.2E-61 T 14-10-2018 IPR023214 HAD superfamily BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Gene3D G3DSA:3.40.640.10 88 356 2.0E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Gene3D G3DSA:3.90.1150.10 39 463 2.0E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Gene3D G3DSA:1.20.1650.10 464 561 1.3E-40 T 14-10-2018 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Gene3D G3DSA:3.40.640.10 576 844 2.9E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Gene3D G3DSA:3.90.1150.10 562 948 2.9E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Pfam PF00202 Aminotransferase class-III 52 465 2.9E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 3.6E-63 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 SUPERFAMILY SSF53383 43 465 2.29E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 467 5.1E-158 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 BJD94_05900 22b50db40b5f60f606339db8ad7a52ae 959 SUPERFAMILY SSF53383 501 957 8.86E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 6.7E-21 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 266 8.3E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 325 344 8.3E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 407 415 8.3E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 SUPERFAMILY SSF52343 316 440 2.23E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 Pfam PF00175 Oxidoreductase NAD-binding domain 327 419 6.1E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 Pfam PF08022 FAD-binding domain 230 314 1.5E-9 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 SUPERFAMILY SSF63380 237 316 7.19E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 Gene3D G3DSA:3.40.50.80 319 443 2.6E-17 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_16740 240d41324a1d85c94557e0138a8526c8 443 Gene3D G3DSA:2.40.30.10 218 314 7.7E-15 T 14-10-2018 BJD94_09535 18544608a2a0f799f6d246984c6319b6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 7.4E-49 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related BJD94_09535 18544608a2a0f799f6d246984c6319b6 187 PIRSF PIRSF028513 2 185 1.8E-32 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BJD94_09535 18544608a2a0f799f6d246984c6319b6 187 Gene3D G3DSA:2.60.450.10 59 186 4.1E-39 T 14-10-2018 BJD94_09535 18544608a2a0f799f6d246984c6319b6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.3E-52 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BJD94_09535 18544608a2a0f799f6d246984c6319b6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.422 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.9E-33 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD94_00645 1688dba375e2077d4a5333347c3ce287 89 PIRSF PIRSF004669 1 89 2.3E-30 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD94_03685 fdbab9e4397245cb6698f213eac97a67 285 Pfam PF13276 HTH-like domain 35 88 5.2E-7 T 14-10-2018 IPR025948 HTH-like domain BJD94_03685 fdbab9e4397245cb6698f213eac97a67 285 Pfam PF00665 Integrase core domain 114 229 1.1E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03685 fdbab9e4397245cb6698f213eac97a67 285 Gene3D G3DSA:3.30.420.10 111 244 2.4E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03685 fdbab9e4397245cb6698f213eac97a67 285 SUPERFAMILY SSF53098 107 273 1.77E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 SUPERFAMILY SSF46785 3 69 1.86E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.2E-112 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 SUPERFAMILY SSF64288 53 228 4.4E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 Gene3D G3DSA:3.40.1410.10 70 228 4.4E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 Gene3D G3DSA:1.10.10.10 2 68 6.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 SMART SM00345 6 65 1.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 Pfam PF07702 UTRA domain 86 223 4.7E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 SMART SM00866 86 225 6.2E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_20205 eefabbf03eb6a4fee7df964286c6de43 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 SUPERFAMILY SSF90123 156 467 1.83E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 SMART SM00382 509 695 1.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Pfam PF03412 Peptidase C39 family 28 120 1.2E-4 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Gene3D G3DSA:3.40.50.300 475 722 1.9E-88 T 14-10-2018 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Gene3D G3DSA:3.90.70.10 27 149 4.4E-8 T 14-10-2018 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Gene3D G3DSA:1.20.1560.10 155 469 2.4E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Pfam PF00664 ABC transporter transmembrane region 172 438 7.5E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 SUPERFAMILY SSF52540 474 719 6.52E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 28 721 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 BJD94_15375 a57191be04fa7eceee11aa996b47598e 722 Pfam PF00005 ABC transporter 500 649 4.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 SMART SM00062 43 287 2.0E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 494 48.003 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Gene3D G3DSA:1.10.530.10 308 469 2.1E-33 T 14-10-2018 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 SUPERFAMILY SSF53850 44 286 5.88E-33 T 14-10-2018 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Gene3D G3DSA:3.40.190.10 37 282 2.3E-66 T 14-10-2018 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 328 356 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 286 4.1E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Gene3D G3DSA:3.40.190.10 128 243 2.3E-66 T 14-10-2018 BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 SUPERFAMILY SSF53955 265 468 7.15E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_07925 b5e0ed387db6d73280c553af317460aa 529 Pfam PF01464 Transglycosylase SLT domain 318 420 3.7E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD94_01730 f01342ec7170d1832224d91eb3560142 309 PIRSF PIRSF006278 214 296 0.77 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BJD94_01730 f01342ec7170d1832224d91eb3560142 309 PIRSF PIRSF006278 4 181 7.9E-21 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BJD94_01730 f01342ec7170d1832224d91eb3560142 309 Gene3D G3DSA:3.40.50.1100 33 137 4.1E-24 T 14-10-2018 BJD94_01730 f01342ec7170d1832224d91eb3560142 309 SUPERFAMILY SSF53686 9 295 1.19E-57 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_01730 f01342ec7170d1832224d91eb3560142 309 Gene3D G3DSA:3.40.50.1100 14 285 4.1E-24 T 14-10-2018 BJD94_01730 f01342ec7170d1832224d91eb3560142 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 218 5.4E-11 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 Gene3D G3DSA:1.10.10.60 205 308 7.2E-23 T 14-10-2018 BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 Pfam PF12852 Cupin 21 191 2.9E-36 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 SMART SM00342 223 305 2.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 Pfam PF12833 Helix-turn-helix domain 229 306 2.0E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 SUPERFAMILY SSF46689 206 256 1.34E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_20145 b20cdacca96ebaf28c157bbe16d0c5f7 308 SUPERFAMILY SSF46689 259 307 1.08E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19505 c9c1b49f86152d63e5ef638bcba943eb 91 SUPERFAMILY SSF55729 3 89 1.89E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_19505 c9c1b49f86152d63e5ef638bcba943eb 91 Pfam PF14542 GCN5-related N-acetyl-transferase 13 89 7.2E-22 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase BJD94_19505 c9c1b49f86152d63e5ef638bcba943eb 91 Gene3D G3DSA:3.40.630.30 1 90 1.9E-22 T 14-10-2018 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 PIRSF PIRSF000460 1 817 1.5E-211 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 SUPERFAMILY SSF53756 8 815 0.0 T 14-10-2018 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 Gene3D G3DSA:3.40.50.2000 475 797 2.6E-142 T 14-10-2018 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 Gene3D G3DSA:3.40.50.2000 5 474 1.3E-192 T 14-10-2018 BJD94_18320 39dc7d0d77b446e98abde9f986ab7468 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 SMART SM00490 519 603 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 SUPERFAMILY SSF52540 201 657 2.54E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Gene3D G3DSA:3.40.50.10810 150 430 2.4E-102 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Gene3D G3DSA:2.30.30.140 1 53 1.6E-23 T 14-10-2018 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Gene3D G3DSA:3.30.360.80 714 786 2.1E-30 T 14-10-2018 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 SMART SM00487 150 346 7.6E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Pfam PF00176 SNF2 family N-terminal domain 174 342 4.7E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.271 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 4.7E-151 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 SUPERFAMILY SSF52540 118 378 1.92E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Gene3D G3DSA:3.40.50.300 431 635 2.4E-47 T 14-10-2018 BJD94_13180 6fef657f2512fa74d4e68b79f6264912 969 Gene3D G3DSA:2.30.30.930 55 114 4.2E-28 T 14-10-2018 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 482 6.4E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 110 4.7E-11 T 14-10-2018 IPR000014 PAS domain BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 Gene3D G3DSA:3.30.450.20 4 121 1.6E-22 T 14-10-2018 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 SUPERFAMILY SSF55785 20 114 2.97E-24 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 SUPERFAMILY SSF58104 238 518 2.49E-58 T 14-10-2018 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 SMART SM00283 257 518 2.5E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 Pfam PF08447 PAS fold 31 114 5.0E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 SMART SM00091 8 75 0.0094 T 14-10-2018 IPR000014 PAS domain BJD94_15715 e98240d4ca6c7b1da6e6577395cc72c4 520 Gene3D G3DSA:1.10.287.950 228 520 7.3E-54 T 14-10-2018 BJD94_06330 ad50026340656781389c0f3b47966f38 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 4.1E-196 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BJD94_06330 ad50026340656781389c0f3b47966f38 616 Gene3D G3DSA:3.90.226.10 94 314 1.2E-161 T 14-10-2018 BJD94_06330 ad50026340656781389c0f3b47966f38 616 Pfam PF01343 Peptidase family S49 138 295 4.7E-30 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD94_06330 ad50026340656781389c0f3b47966f38 616 Pfam PF01343 Peptidase family S49 391 541 1.3E-44 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD94_06330 ad50026340656781389c0f3b47966f38 616 SUPERFAMILY SSF52096 324 529 4.97E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_06330 ad50026340656781389c0f3b47966f38 616 Gene3D G3DSA:3.90.226.10 315 539 1.2E-161 T 14-10-2018 BJD94_06330 ad50026340656781389c0f3b47966f38 616 PIRSF PIRSF001217 8 616 1.3E-234 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BJD94_06330 ad50026340656781389c0f3b47966f38 616 Gene3D G3DSA:3.40.1750.10 186 497 1.2E-161 T 14-10-2018 BJD94_06330 ad50026340656781389c0f3b47966f38 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 6.5E-50 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BJD94_06330 ad50026340656781389c0f3b47966f38 616 SUPERFAMILY SSF52096 39 284 1.86E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 SUPERFAMILY SSF52788 1 148 2.35E-48 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 Gene3D G3DSA:3.40.50.2300 1 152 1.2E-57 T 14-10-2018 BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.8E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD94_05765 29f78751e2bfc0ed8e49e8e670ed13bf 152 SMART SM00226 2 148 1.2E-39 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD94_13725 2a76e706464988f0f5cf77167b659672 423 SMART SM00267 234 413 1.6E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_13725 2a76e706464988f0f5cf77167b659672 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 1.3E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_13725 2a76e706464988f0f5cf77167b659672 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 411 1.2E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_13725 2a76e706464988f0f5cf77167b659672 423 Gene3D G3DSA:3.30.70.270 245 422 1.3E-44 T 14-10-2018 BJD94_13725 2a76e706464988f0f5cf77167b659672 423 Gene3D G3DSA:1.20.1480.50 140 235 3.8E-8 T 14-10-2018 BJD94_13725 2a76e706464988f0f5cf77167b659672 423 SUPERFAMILY SSF55073 254 414 2.59E-38 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.345 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 PIRSF PIRSF002181 1 142 1.3E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 SUPERFAMILY SSF52161 1 140 9.42E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 Pfam PF00572 Ribosomal protein L13 15 138 4.5E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 Gene3D G3DSA:3.90.1180.10 1 142 4.3E-63 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_08995 d5e2ae1ce539f711d682c6bdf8534ef8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.2E-64 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 Gene3D G3DSA:1.10.10.10 7 93 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 Gene3D G3DSA:3.40.190.10 103 290 9.2E-38 T 14-10-2018 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 Gene3D G3DSA:3.40.190.10 164 263 9.2E-38 T 14-10-2018 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 SUPERFAMILY SSF53850 91 293 5.79E-26 T 14-10-2018 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 Pfam PF03466 LysR substrate binding domain 90 294 8.3E-24 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18915 48ff3a1ed083515cac14b8d403f085c1 297 SUPERFAMILY SSF46785 7 80 2.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11075 ba762283ffa3a562ab189073cb816775 288 Gene3D G3DSA:1.10.287.80 6 284 1.6E-111 T 14-10-2018 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 SUPERFAMILY SSF52943 2 288 7.95E-97 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 Pfam PF00231 ATP synthase 5 287 3.2E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.1E-112 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 Gene3D G3DSA:3.40.1380.10 61 207 1.6E-111 T 14-10-2018 BJD94_11075 ba762283ffa3a562ab189073cb816775 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 37.049 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11945 84283dc51308e10e309e2ab27bb383f6 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_11945 84283dc51308e10e309e2ab27bb383f6 162 Pfam PF00466 Ribosomal protein L10 5 101 2.1E-26 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BJD94_11945 84283dc51308e10e309e2ab27bb383f6 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.316 T 14-10-2018 IPR022973 Ribosomal protein L10 BJD94_11945 84283dc51308e10e309e2ab27bb383f6 162 SUPERFAMILY SSF160369 4 159 4.97E-45 T 14-10-2018 BJD94_11945 84283dc51308e10e309e2ab27bb383f6 162 Gene3D G3DSA:3.30.70.1730 1 124 2.8E-35 T 14-10-2018 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SUPERFAMILY SSF48452 177 321 1.77E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Gene3D G3DSA:1.25.40.10 287 460 3.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 291 324 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 174 207 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 133 166 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 93 126 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 331 364 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 251 284 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00028 211 244 62.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Pfam PF13424 Tetratricopeptide repeat 213 283 1.5E-10 T 14-10-2018 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Gene3D G3DSA:3.30.70.270 469 638 1.2E-37 T 14-10-2018 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SUPERFAMILY SSF48452 93 209 5.31E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Gene3D G3DSA:1.25.40.10 82 206 1.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SMART SM00267 466 639 4.3E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Gene3D G3DSA:1.25.40.10 207 286 5.4E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SUPERFAMILY SSF48452 290 425 7.87E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 636 3.9E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 SUPERFAMILY SSF55073 483 636 3.92E-33 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_04485 d74249abdb9fb163f2d96c095f52c76f 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 635 1.7E-31 T 14-10-2018 IPR000160 GGDEF domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 323 485 2.4E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 SUPERFAMILY SSF141868 503 745 3.14E-87 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 SMART SM00052 497 740 7.8E-108 T 14-10-2018 IPR001633 EAL domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 Gene3D G3DSA:3.20.20.450 500 747 4.4E-93 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 SUPERFAMILY SSF55073 332 488 2.67E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 Gene3D G3DSA:3.30.70.270 321 499 7.2E-51 T 14-10-2018 BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 483 2.2E-41 T 14-10-2018 IPR000160 GGDEF domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 SMART SM01079 71 248 7.4E-39 T 14-10-2018 IPR006189 CHASE domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 SMART SM00267 316 487 8.8E-52 T 14-10-2018 IPR000160 GGDEF domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 Pfam PF03924 CHASE domain 133 235 7.9E-15 T 14-10-2018 IPR006189 CHASE domain BJD94_11195 9a8ef3be3bc8aa87df2fd1911bfd4c4e 753 Pfam PF00563 EAL domain 503 735 1.3E-72 T 14-10-2018 IPR001633 EAL domain BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 Gene3D G3DSA:3.40.50.2300 3 152 1.1E-27 T 14-10-2018 BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 SUPERFAMILY SSF52172 5 135 1.39E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 SMART SM00448 5 118 9.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF00072 Response regulator receiver domain 7 118 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF12431 Transcriptional regulator 134 162 4.0E-8 T 14-10-2018 IPR028141 Transcriptional regulator BJD94_04330 4b9779127d0822fcc2984119f0f2828b 228 PIRSF PIRSF006171 3 228 2.1E-83 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 Gene3D G3DSA:3.40.47.10 1 255 3.1E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 SUPERFAMILY SSF53901 2 252 1.33E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 SUPERFAMILY SSF53901 216 406 1.41E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.4E-10 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.3E-39 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 6.7E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD94_06795 8ffd7785b15e06849d3a330bd2cf4304 409 Gene3D G3DSA:3.40.47.10 261 408 1.4E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Pfam PF13426 PAS domain 306 408 0.045 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Gene3D G3DSA:3.30.450.20 36 157 1.0E-30 T 14-10-2018 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Gene3D G3DSA:3.30.450.20 163 283 4.4E-34 T 14-10-2018 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Gene3D G3DSA:3.30.450.20 289 408 3.4E-33 T 14-10-2018 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SUPERFAMILY SSF55785 153 271 5.06E-6 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Gene3D G3DSA:1.10.287.950 452 754 3.7E-89 T 14-10-2018 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Pfam PF13188 PAS domain 40 94 0.0046 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Pfam PF13188 PAS domain 165 217 0.0047 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 565 721 7.3E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 631 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 681 710 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 633 662 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00091 38 101 12.0 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00091 292 361 6.7 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00091 165 232 2.2 T 14-10-2018 IPR000014 PAS domain BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00283 506 753 1.9E-97 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00304 453 505 8.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SMART SM00304 506 558 74.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17925 f1da1f690f18b62b13d3460d185a1856 807 SUPERFAMILY SSF58104 473 754 3.79E-75 T 14-10-2018 BJD94_17920 9d73888515de80b91b73005471488100 284 Gene3D G3DSA:3.40.50.150 86 284 5.8E-63 T 14-10-2018 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 PRINTS PR00996 Glutamate methyltransferase family signature 43 56 4.3E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 281 1.5E-59 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD94_17920 9d73888515de80b91b73005471488100 284 Gene3D G3DSA:1.10.155.10 9 85 6.8E-23 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BJD94_17920 9d73888515de80b91b73005471488100 284 SUPERFAMILY SSF53335 87 283 2.19E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_17920 9d73888515de80b91b73005471488100 284 SMART SM00138 21 284 4.7E-83 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_17920 9d73888515de80b91b73005471488100 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 22 74 2.9E-14 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD94_17920 9d73888515de80b91b73005471488100 284 PIRSF PIRSF000410 4 284 1.4E-96 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR BJD94_17920 9d73888515de80b91b73005471488100 284 SUPERFAMILY SSF47757 11 86 3.4E-19 T 14-10-2018 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 SMART SM00283 367 628 2.4E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Pfam PF02743 Cache domain 46 260 9.4E-32 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 595 5.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 SMART SM00304 353 405 84.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 SMART SM00304 298 352 6.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Gene3D G3DSA:1.10.287.950 299 629 1.0E-70 T 14-10-2018 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 SUPERFAMILY SSF58104 320 629 1.7E-74 T 14-10-2018 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Gene3D G3DSA:3.30.450.20 67 171 1.8E-44 T 14-10-2018 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Gene3D G3DSA:3.30.450.20 57 271 1.8E-44 T 14-10-2018 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 SUPERFAMILY SSF103190 92 181 1.57E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 Pfam PF00672 HAMP domain 307 347 2.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 492 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_19645 41d65c53082682b48d73bcad5dc40fd3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Gene3D G3DSA:3.40.50.150 1 302 4.4E-96 T 14-10-2018 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 1 97 2.8E-28 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 114 124 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 181 193 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 285 302 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 231 247 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 83 97 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 413 461 5.8E-11 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 1 466 65.347 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 SUPERFAMILY SSF53335 2 302 3.56E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Pfam PF01189 16S rRNA methyltransferase RsmB/F 105 300 4.3E-48 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 180 191 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 34 302 6.0E-100 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 BJD94_04160 f9f55453bf8b3aa360fc22222a751e9b 466 Gene3D G3DSA:2.30.130.90 303 466 6.0E-66 T 14-10-2018 BJD94_20650 e946a9f3fe228b0744c0a5b97d81a275 399 Gene3D G3DSA:3.40.50.300 147 383 4.5E-14 T 14-10-2018 BJD94_20650 e946a9f3fe228b0744c0a5b97d81a275 399 SUPERFAMILY SSF52540 149 340 2.27E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.970 1 175 3.6E-67 T 14-10-2018 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.1E-39 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52518 1 178 1.72E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.970 350 548 4.2E-67 T 14-10-2018 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.8E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.1220 180 349 1.5E-51 T 14-10-2018 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.0E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52518 358 545 2.5E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52467 182 342 5.57E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_11015 16561f9b48b44986fd466024ae7b6c4b 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.8E-210 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 Pfam PF03102 NeuB family 22 289 3.1E-98 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 SUPERFAMILY SSF51569 2 313 2.42E-77 T 14-10-2018 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 SUPERFAMILY SSF51269 295 356 4.55E-17 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 Gene3D G3DSA:3.90.1210.10 292 357 3.6E-19 T 14-10-2018 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 2.6E-152 T 14-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 BJD94_10100 494a377a237442de26c7ea17e28ea949 357 Gene3D G3DSA:3.20.20.70 1 288 9.2E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 Gene3D G3DSA:3.30.470.20 361 473 1.0E-18 T 14-10-2018 BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 SUPERFAMILY SSF56059 268 476 6.87E-40 T 14-10-2018 BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 Gene3D G3DSA:3.30.1490.20 293 359 2.8E-5 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 Gene3D G3DSA:3.40.50.20 205 291 5.3E-6 T 14-10-2018 BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 4.5E-43 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain BJD94_14685 0ee8b24efa78094f10ec83a0c5ffcbd6 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 1.5E-9 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 5.5E-22 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 730 6.1E-135 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Gene3D G3DSA:3.20.20.60 400 739 1.2E-104 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Gene3D G3DSA:3.50.30.10 173 399 3.5E-56 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 SMART SM00065 17 163 1.6E-22 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Gene3D G3DSA:1.10.274.10 190 314 3.5E-56 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 SUPERFAMILY SSF47831 203 311 2.62E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Gene3D G3DSA:3.30.450.40 1 161 6.2E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 SUPERFAMILY SSF55781 2 158 1.79E-33 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 2.7E-95 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 SUPERFAMILY SSF51621 422 713 6.54E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 SUPERFAMILY SSF52009 293 412 1.28E-25 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Pfam PF01590 GAF domain 17 153 1.1E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 7.1E-23 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 7.1E-23 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.1E-23 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 7.1E-23 T 14-10-2018 BJD94_08605 4cd76e95f9550f70d60c0c8f2bed312a 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 5.8E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 SUPERFAMILY SSF46785 159 232 3.14E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 SMART SM00100 23 142 1.7E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 Pfam PF13545 Crp-like helix-turn-helix domain 162 230 5.9E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 Gene3D G3DSA:2.60.120.10 6 156 1.5E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 SUPERFAMILY SSF51206 17 157 1.31E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 SMART SM00419 176 224 1.3E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 Pfam PF00027 Cyclic nucleotide-binding domain 42 130 8.3E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_18270 b039bba95bd91eaf5421667f283eee6d 260 Gene3D G3DSA:1.10.10.10 157 231 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Pfam PF00270 DEAD/DEAH box helicase 101 246 2.4E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 SMART SM00490 316 416 7.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 SMART SM00847 476 571 7.8E-39 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 27 1308 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 634 710 4.8E-22 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 SUPERFAMILY SSF52540 87 610 4.34E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Pfam PF04408 Helicase associated domain (HA2) 478 569 2.0E-19 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Gene3D G3DSA:3.40.50.300 266 433 2.0E-55 T 14-10-2018 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 SMART SM00487 85 272 1.9E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 SMART SM00382 105 396 3.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Pfam PF11898 Domain of unknown function (DUF3418) 724 1308 5.1E-232 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Pfam PF00271 Helicase conserved C-terminal domain 302 415 3.1E-11 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Gene3D G3DSA:3.40.50.300 41 265 7.8E-78 T 14-10-2018 BJD94_02395 7aa5981321787c94b6cdc7e91f19b7a8 1310 Gene3D G3DSA:1.20.120.1080 460 562 1.7E-19 T 14-10-2018 BJD94_18035 7ece41543e338d6bab41011f99e2f9a6 256 Gene3D G3DSA:2.50.20.10 21 250 1.9E-37 T 14-10-2018 BJD94_18035 7ece41543e338d6bab41011f99e2f9a6 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 249 1.9E-36 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein BJD94_18035 7ece41543e338d6bab41011f99e2f9a6 256 PIRSF PIRSF028205 1 253 3.2E-114 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 BJD94_19300 8d68dd7cd7bbf78e60402a8c313fd66e 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD94_19300 8d68dd7cd7bbf78e60402a8c313fd66e 170 Gene3D G3DSA:2.60.40.200 20 170 1.0E-47 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD94_19300 8d68dd7cd7bbf78e60402a8c313fd66e 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD94_19300 8d68dd7cd7bbf78e60402a8c313fd66e 170 SUPERFAMILY SSF49329 27 170 1.83E-49 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD94_19300 8d68dd7cd7bbf78e60402a8c313fd66e 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 5.0E-33 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD94_13105 cef88afb1fbfef5f2295adcf854b6e8c 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13105 cef88afb1fbfef5f2295adcf854b6e8c 156 Gene3D G3DSA:3.30.700.10 7 156 7.9E-17 T 14-10-2018 BJD94_13105 cef88afb1fbfef5f2295adcf854b6e8c 156 SUPERFAMILY SSF54523 7 117 3.22E-14 T 14-10-2018 BJD94_13105 cef88afb1fbfef5f2295adcf854b6e8c 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13105 cef88afb1fbfef5f2295adcf854b6e8c 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 SUPERFAMILY SSF47413 1 58 9.21E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 SUPERFAMILY SSF53822 61 313 8.25E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 246 5.6E-14 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 Gene3D G3DSA:3.40.50.2300 62 154 2.2E-19 T 14-10-2018 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 Gene3D G3DSA:3.40.50.2300 155 326 1.6E-25 T 14-10-2018 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 SMART SM00354 1 73 8.2E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 8.4E-140 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 BJD94_21190 e05d2ac6c4e92565185bc7f3c31881c7 326 Gene3D G3DSA:1.10.260.40 1 61 1.7E-25 T 14-10-2018 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 SMART SM00841 132 187 1.6E-28 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 8.2E-18 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.221 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 6.3E-91 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 SMART SM01185 69 124 8.0E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 SUPERFAMILY SSF50104 1 65 9.03E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 122 7.4E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 PIRSF PIRSF005901 1 188 8.0E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 7.7E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Gene3D G3DSA:2.40.50.140 67 130 8.0E-14 T 14-10-2018 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 SUPERFAMILY SSF50249 67 129 4.28E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 SUPERFAMILY SSF50249 132 188 1.4E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Gene3D G3DSA:2.30.30.30 1 65 2.2E-14 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD94_05955 9eb23b231d50fdd9007867dde3edebec 188 Gene3D G3DSA:2.40.50.140 131 188 1.5E-21 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.2090.10 723 813 5.3E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.70.1320 151 343 5.3E-255 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.70.1430 573 671 5.3E-255 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:1.20.1640.10 522 1025 5.3E-255 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.70.1430 55 821 5.3E-255 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82866 810 1032 1.83E-46 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.70.1440 672 873 5.3E-255 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Pfam PF00873 AcrB/AcrD/AcrF family 19 1029 1.8E-171 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:3.30.2090.10 194 286 5.3E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82693 151 338 2.3E-18 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82866 307 506 5.49E-34 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82693 55 150 2.09E-22 T 14-10-2018 BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82714 199 282 1.2E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 SUPERFAMILY SSF82714 729 804 2.22E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_05165 f1905bd6689c31c6b8f98c6dc08678bd 1035 Gene3D G3DSA:1.20.1640.10 25 521 5.3E-255 T 14-10-2018 BJD94_15670 56f1b87c7b2f63b90f75bbe9206eb091 258 SUPERFAMILY SSF69572 4 249 2.88E-85 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD94_15670 56f1b87c7b2f63b90f75bbe9206eb091 258 Gene3D G3DSA:3.40.50.720 4 255 2.3E-87 T 14-10-2018 BJD94_15670 56f1b87c7b2f63b90f75bbe9206eb091 258 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 2.3E-131 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 BJD94_15670 56f1b87c7b2f63b90f75bbe9206eb091 258 Pfam PF00899 ThiF family 12 249 2.3E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD94_11505 7ff3dc49f0c9f69052ae86c8e88a7a4a 255 SUPERFAMILY SSF53335 3 250 3.19E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_11505 7ff3dc49f0c9f69052ae86c8e88a7a4a 255 Pfam PF04445 Putative SAM-dependent methyltransferase 15 250 3.2E-105 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BJD94_11505 7ff3dc49f0c9f69052ae86c8e88a7a4a 255 Gene3D G3DSA:3.40.50.150 53 255 6.7E-74 T 14-10-2018 BJD94_11505 7ff3dc49f0c9f69052ae86c8e88a7a4a 255 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 252 38.098 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BJD94_11505 7ff3dc49f0c9f69052ae86c8e88a7a4a 255 Gene3D G3DSA:3.40.1630.10 1 52 5.5E-18 T 14-10-2018 BJD94_09670 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SMART SM00382 35 228 3.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09670 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SUPERFAMILY SSF52540 5 225 8.8E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09670 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Gene3D G3DSA:3.40.50.300 6 232 4.2E-57 T 14-10-2018 BJD94_09670 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Pfam PF00005 ABC transporter 30 180 2.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 Pfam PF00270 DEAD/DEAH box helicase 26 194 2.1E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 Gene3D G3DSA:3.40.50.300 214 425 2.8E-45 T 14-10-2018 BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 509 51.105 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 Gene3D G3DSA:3.40.50.300 1 209 2.7E-75 T 14-10-2018 BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 SUPERFAMILY SSF52540 73 359 1.47E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 SMART SM00487 20 221 1.4E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 SMART SM00490 257 338 1.1E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_15960 5428fd436faa3add5b764570bc668ef9 511 Pfam PF00271 Helicase conserved C-terminal domain 230 338 7.6E-27 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_17095 25d0539f8a2d42940bd0ffbcdf24798a 179 Pfam PF01161 Phosphatidylethanolamine-binding protein 46 177 5.4E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein BJD94_17095 25d0539f8a2d42940bd0ffbcdf24798a 179 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 177 5.7E-38 T 14-10-2018 IPR005247 YbhB/YbcL BJD94_17095 25d0539f8a2d42940bd0ffbcdf24798a 179 Gene3D G3DSA:3.90.280.10 11 179 9.4E-53 T 14-10-2018 IPR036610 PEBP-like superfamily BJD94_17095 25d0539f8a2d42940bd0ffbcdf24798a 179 SUPERFAMILY SSF49777 24 179 3.01E-49 T 14-10-2018 IPR036610 PEBP-like superfamily BJD94_06445 e346234cf98bf2088c3da49e505debbc 361 Gene3D G3DSA:3.40.50.1100 51 157 1.3E-67 T 14-10-2018 BJD94_06445 e346234cf98bf2088c3da49e505debbc 361 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 2.0E-40 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_06445 e346234cf98bf2088c3da49e505debbc 361 SUPERFAMILY SSF53686 23 335 6.94E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_06445 e346234cf98bf2088c3da49e505debbc 361 Gene3D G3DSA:3.40.50.1100 25 324 1.3E-67 T 14-10-2018 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.585 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 PIRSF PIRSF000437 19 809 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 SUPERFAMILY SSF69593 281 488 4.71E-25 T 14-10-2018 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 Pfam PF01553 Acyltransferase 289 424 9.2E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 SMART SM00563 300 427 3.2E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_11745 2fcdd000c738c4650a5182d20e5dd1e4 809 PIRSF PIRSF500064 3 809 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Gene3D G3DSA:1.10.260.40 3 59 1.0E-24 T 14-10-2018 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Gene3D G3DSA:3.40.50.2300 161 323 5.9E-92 T 14-10-2018 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.1E-45 T 14-10-2018 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Gene3D G3DSA:3.40.50.2300 69 322 5.9E-92 T 14-10-2018 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 SUPERFAMILY SSF47413 1 59 8.61E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 SUPERFAMILY SSF53822 60 331 1.88E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 SMART SM00354 1 71 2.9E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.635 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 BJD94_01380 72cee19f5e0532ab323592e39940cc20 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 Gene3D G3DSA:3.30.9.50 80 266 2.7E-98 T 14-10-2018 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 Gene3D G3DSA:3.50.50.60 5 327 2.7E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 Pfam PF01494 FAD binding domain 4 75 2.5E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 Pfam PF01494 FAD binding domain 151 309 5.4E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 SUPERFAMILY SSF51905 3 375 5.18E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.2E-18 T 14-10-2018 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 2.2E-18 T 14-10-2018 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-18 T 14-10-2018 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 2.2E-18 T 14-10-2018 BJD94_07570 109226abba7b16f57ede1933aea2a7f6 382 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 381 9.0E-113 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 SUPERFAMILY SSF51215 30 133 2.22E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 SUPERFAMILY SSF46689 220 269 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 9.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 9.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 SMART SM00342 183 266 1.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 Gene3D G3DSA:1.10.10.60 218 270 2.6E-14 T 14-10-2018 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 Pfam PF12833 Helix-turn-helix domain 189 267 1.9E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 Gene3D G3DSA:1.10.10.60 169 217 1.5E-10 T 14-10-2018 BJD94_17745 da59e60aef3e9a237063c9e519bd5d65 272 SUPERFAMILY SSF46689 170 216 4.48E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 4.6E-112 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.796 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 6.6E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 7.0E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 SUPERFAMILY SSF53901 7 325 3.44E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_21715 ffbe72ff6977356cb7e8d49587fb8d5b 362 Gene3D G3DSA:3.40.47.10 1 362 1.4E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Pfam PF01625 Peptide methionine sulfoxide reductase 54 204 2.0E-54 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 51 210 33.808 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Gene3D G3DSA:3.30.1060.10 28 212 1.0E-59 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 54 203 2.1E-48 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 SUPERFAMILY SSF51316 250 389 9.42E-60 T 14-10-2018 IPR011057 Mss4-like superfamily BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 248 374 35.198 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 SUPERFAMILY SSF55068 40 216 1.09E-67 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 250 382 1.2E-60 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Gene3D G3DSA:2.170.150.20 240 390 2.4E-56 T 14-10-2018 BJD94_20110 f11216199f7bf051f001bb4c16618d32 390 Pfam PF01641 SelR domain 254 373 2.1E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_12295 a5bba6d5d1926b8ed29a302a1e39ce6e 295 SUPERFAMILY SSF103481 36 140 1.44E-12 T 14-10-2018 BJD94_12295 a5bba6d5d1926b8ed29a302a1e39ce6e 295 SUPERFAMILY SSF103481 217 294 8.76E-11 T 14-10-2018 BJD94_12295 a5bba6d5d1926b8ed29a302a1e39ce6e 295 Pfam PF00892 EamA-like transporter family 156 294 1.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_12295 a5bba6d5d1926b8ed29a302a1e39ce6e 295 Pfam PF00892 EamA-like transporter family 5 135 3.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.585 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 SUPERFAMILY SSF53383 6 415 7.34E-186 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 PIRSF PIRSF000412 1 416 2.0E-170 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 Gene3D G3DSA:3.90.1150.10 10 395 1.1E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 Gene3D G3DSA:3.40.640.10 37 288 1.1E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_07670 39ed3d1d495d8a602d81ad5086efb7de 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 2.6E-183 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 Gene3D G3DSA:2.40.50.140 286 349 2.1E-16 T 14-10-2018 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 Gene3D G3DSA:2.40.50.940 226 355 2.1E-16 T 14-10-2018 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 SMART SM00382 32 215 1.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20195 b0803b20456f3a7534c45632e9629998 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 357 5.6E-163 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 Gene3D G3DSA:3.40.50.300 7 225 1.5E-69 T 14-10-2018 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 SUPERFAMILY SSF50331 240 357 5.1E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_20195 b0803b20456f3a7534c45632e9629998 368 SUPERFAMILY SSF52540 8 247 1.33E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20195 b0803b20456f3a7534c45632e9629998 368 Pfam PF00005 ABC transporter 23 165 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_20195 b0803b20456f3a7534c45632e9629998 368 Pfam PF08402 TOBE domain 279 355 7.5E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 SMART SM00062 33 257 1.9E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 Gene3D G3DSA:3.40.190.10 30 252 3.2E-62 T 14-10-2018 BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 SUPERFAMILY SSF53850 1 255 7.25E-50 T 14-10-2018 BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 Gene3D G3DSA:3.40.190.10 120 215 3.2E-62 T 14-10-2018 BJD94_11050 e43f0ce50a60d2bae2535cf54a961a1b 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 3.8E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_13910 a6718671170d4d1cf04f9c8185ce9afb 210 SUPERFAMILY SSF53955 17 202 9.64E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_13910 a6718671170d4d1cf04f9c8185ce9afb 210 Gene3D G3DSA:1.10.530.10 46 206 1.2E-13 T 14-10-2018 BJD94_12625 bc5a97b6140035871833ad2ded5abac8 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.8E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BJD94_12625 bc5a97b6140035871833ad2ded5abac8 336 Gene3D G3DSA:3.40.50.720 3 273 4.7E-141 T 14-10-2018 BJD94_12625 bc5a97b6140035871833ad2ded5abac8 336 SUPERFAMILY SSF51735 1 335 2.2E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_12625 bc5a97b6140035871833ad2ded5abac8 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 3.2E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain BJD94_12625 bc5a97b6140035871833ad2ded5abac8 336 Gene3D G3DSA:3.90.25.10 193 328 4.7E-141 T 14-10-2018 BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 SUPERFAMILY SSF52540 8 242 1.77E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 PIRSF PIRSF039085 5 248 1.4E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 Pfam PF00005 ABC transporter 24 172 4.4E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 Gene3D G3DSA:3.40.50.300 6 249 1.5E-80 T 14-10-2018 BJD94_04430 e16869c3aa71e533b6b68e45d00fb382 249 SMART SM00382 33 220 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_03585 65c70abfc37fb1057a1e5cefa599b954 147 Pfam PF13673 Acetyltransferase (GNAT) domain 48 136 9.6E-9 T 14-10-2018 IPR000182 GNAT domain BJD94_03585 65c70abfc37fb1057a1e5cefa599b954 147 SUPERFAMILY SSF55729 6 141 4.39E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03585 65c70abfc37fb1057a1e5cefa599b954 147 Gene3D G3DSA:3.40.630.30 3 144 3.3E-15 T 14-10-2018 BJD94_01205 e3a5ad2f07658409ccd66e29278d2716 626 SMART SM00304 295 349 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01205 e3a5ad2f07658409ccd66e29278d2716 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 591 3.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01205 e3a5ad2f07658409ccd66e29278d2716 626 SMART SM00283 364 618 2.3E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01205 e3a5ad2f07658409ccd66e29278d2716 626 Gene3D G3DSA:1.10.287.950 295 610 3.0E-66 T 14-10-2018 BJD94_01205 e3a5ad2f07658409ccd66e29278d2716 626 SUPERFAMILY SSF58104 315 625 4.19E-64 T 14-10-2018 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 SUPERFAMILY SSF51645 18 543 3.66E-188 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 Gene3D G3DSA:3.20.20.360 12 422 4.2E-193 T 14-10-2018 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 3.9E-263 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 PIRSF PIRSF001363 12 544 4.4E-254 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 Pfam PF01274 Malate synthase 23 543 6.8E-202 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_08305 3363ef36c600b88b5183d8422805a117 544 Gene3D G3DSA:1.20.1220.12 423 544 1.5E-48 T 14-10-2018 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 SUPERFAMILY SSF46992 3 86 2.62E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.607 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 Gene3D G3DSA:1.20.58.110 1 86 1.3E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_08565 02f35510c1918f3841e4ed957ba17894 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 8.3E-32 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Gene3D G3DSA:3.30.160.40 222 307 6.4E-29 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 5.2E-116 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Gene3D G3DSA:3.40.190.10 7 211 1.6E-85 T 14-10-2018 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 1.5E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.183 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 PIRSF PIRSF001438 1 312 3.4E-124 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 297 2.5E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 SUPERFAMILY SSF53850 6 220 3.26E-87 T 14-10-2018 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 Gene3D G3DSA:3.40.190.10 104 203 1.6E-85 T 14-10-2018 BJD94_11555 74d4f0be074aa85aeecfdb80e0c6de66 312 SUPERFAMILY SSF54782 221 310 3.14E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Pfam PF04545 Sigma-70, region 4 259 312 1.1E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 PRINTS PR00046 Major sigma-70 factor signature 263 275 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 PRINTS PR00046 Major sigma-70 factor signature 139 147 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 PRINTS PR00046 Major sigma-70 factor signature 284 299 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 PRINTS PR00046 Major sigma-70 factor signature 115 128 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 PRINTS PR00046 Major sigma-70 factor signature 299 310 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 284 310 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Pfam PF00140 Sigma-70 factor, region 1.2 53 86 4.1E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Pfam PF04542 Sigma-70 region 2 91 160 6.9E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 325 39.585 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Pfam PF04539 Sigma-70 region 3 171 244 3.4E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 SUPERFAMILY SSF88659 221 320 2.62E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 115 128 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 313 1.9E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 325 2.7E-138 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 SUPERFAMILY SSF88946 53 161 1.15E-45 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Gene3D G3DSA:1.10.10.10 164 239 6.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Gene3D G3DSA:1.10.601.10 3 160 1.9E-47 T 14-10-2018 BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 SUPERFAMILY SSF88659 164 237 3.49E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_13795 214ab22de67d34151cb5e7be39c8d9a0 330 Gene3D G3DSA:1.10.10.10 241 321 7.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18140 436005904e69bb95fbbb5d2032110bec 197 Gene3D G3DSA:1.10.357.10 49 193 2.9E-20 T 14-10-2018 BJD94_18140 436005904e69bb95fbbb5d2032110bec 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 7.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_18140 436005904e69bb95fbbb5d2032110bec 197 SUPERFAMILY SSF48498 81 193 3.4E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_18140 436005904e69bb95fbbb5d2032110bec 197 Gene3D G3DSA:1.10.10.60 1 47 4.5E-20 T 14-10-2018 BJD94_18140 436005904e69bb95fbbb5d2032110bec 197 SUPERFAMILY SSF46689 3 70 6.31E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_11135 01418f321131fa5426c134c11d159666 462 SUPERFAMILY SSF52540 79 380 1.17E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11135 01418f321131fa5426c134c11d159666 462 Gene3D G3DSA:3.30.1360.120 3 129 1.2E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BJD94_11135 01418f321131fa5426c134c11d159666 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 379 3.1E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_11135 01418f321131fa5426c134c11d159666 462 Gene3D G3DSA:1.20.120.430 130 462 1.5E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BJD94_11135 01418f321131fa5426c134c11d159666 462 Pfam PF12631 MnmE helical domain 131 459 3.5E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BJD94_11135 01418f321131fa5426c134c11d159666 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 14 128 1.4E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BJD94_11135 01418f321131fa5426c134c11d159666 462 Pfam PF01926 50S ribosome-binding GTPase 226 315 5.2E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_11135 01418f321131fa5426c134c11d159666 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 13 462 32.956 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BJD94_11135 01418f321131fa5426c134c11d159666 462 Gene3D G3DSA:3.40.50.300 225 390 1.5E-103 T 14-10-2018 BJD94_11135 01418f321131fa5426c134c11d159666 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 462 3.8E-101 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BJD94_11135 01418f321131fa5426c134c11d159666 462 SUPERFAMILY SSF116878 129 462 2.48E-53 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Gene3D G3DSA:1.10.287.470 77 199 1.3E-42 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 SUPERFAMILY SSF111369 38 165 2.62E-12 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Gene3D G3DSA:2.40.50.100 44 234 1.3E-42 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Gene3D G3DSA:2.40.420.20 312 324 1.3E-42 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Gene3D G3DSA:2.40.30.170 235 311 1.3E-42 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 SUPERFAMILY SSF111369 179 253 1.44E-5 T 14-10-2018 BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Pfam PF13533 Biotin-lipoyl like 44 91 1.4E-17 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_17385 eb235eac007b369b673398edb1adf14d 354 Pfam PF13437 HlyD family secretion protein 200 272 4.3E-7 T 14-10-2018 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SMART SM00073 873 969 3.5E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 535 6.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SUPERFAMILY SSF47226 861 969 3.93E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Pfam PF00072 Response regulator receiver domain 715 828 2.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SMART SM00448 713 828 6.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:3.40.50.2300 704 839 1.0E-33 T 14-10-2018 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 PIRSF PIRSF036437 1 970 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SMART SM00387 582 695 4.2E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:1.10.287.130 404 533 5.3E-25 T 14-10-2018 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SUPERFAMILY SSF55874 524 699 6.42E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SUPERFAMILY SSF47384 459 536 1.14E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SUPERFAMILY SSF52172 712 835 3.7E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:1.20.120.160 855 970 1.3E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Pfam PF01627 Hpt domain 883 957 9.5E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 SMART SM00388 470 535 8.8E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 694 8.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:3.30.565.10 534 697 2.4E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:1.20.58.920 47 182 5.9E-45 T 14-10-2018 IPR038188 TorS, sensor domain superfamily BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 Gene3D G3DSA:1.20.58.920 183 323 1.9E-51 T 14-10-2018 IPR038188 TorS, sensor domain superfamily BJD94_20815 0cc81fadeca0d646f9ff4ea8cb9c402a 970 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 966 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.3E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 SMART SM00662 23 235 1.0E-103 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.2E-111 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:2.170.120.12 53 178 1.1E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:3.30.1360.10 17 229 1.1E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_09755 4620ebc6b5a5872619646f6a3aaac60a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.681 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_04260 3b432b7770dd1026b427e4271c07199e 256 SUPERFAMILY SSF51161 95 253 3.4E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_04260 3b432b7770dd1026b427e4271c07199e 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 202 233 4.3E-9 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_04260 3b432b7770dd1026b427e4271c07199e 256 Gene3D G3DSA:2.160.10.10 88 254 6.5E-37 T 14-10-2018 BJD94_04260 3b432b7770dd1026b427e4271c07199e 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 207 235 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Pfam PF07517 SecA DEAD-like domain 7 403 2.9E-133 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Gene3D G3DSA:3.90.1440.10 229 369 2.4E-176 T 14-10-2018 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Gene3D G3DSA:1.10.3060.10 621 833 1.5E-75 T 14-10-2018 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.025 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Pfam PF02810 SEC-C motif 887 905 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Pfam PF01043 SecA preprotein cross-linking domain 232 359 3.0E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Gene3D G3DSA:3.40.50.300 418 620 2.3E-87 T 14-10-2018 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SUPERFAMILY SSF81886 620 895 1.18E-82 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.9E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SUPERFAMILY SSF52540 418 610 1.63E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SMART SM00958 228 359 3.1E-81 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SUPERFAMILY SSF52540 5 416 1.26E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 SUPERFAMILY SSF81767 227 369 1.22E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BJD94_08855 7f3ab8b956dd860bdf79820a038287dc 907 Gene3D G3DSA:3.40.50.300 22 416 2.4E-176 T 14-10-2018 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SUPERFAMILY SSF47384 775 854 7.65E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 2.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Gene3D G3DSA:3.30.450.20 616 746 5.4E-12 T 14-10-2018 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SUPERFAMILY SSF55785 626 741 1.95E-9 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 8.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Gene3D G3DSA:1.20.1730.10 33 510 8.5E-9 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SMART SM00448 1026 1139 7.3E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Pfam PF12860 PAS fold 634 748 4.7E-44 T 14-10-2018 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Gene3D G3DSA:3.30.565.10 859 1011 2.0E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Gene3D G3DSA:3.40.50.2300 1022 1143 1.1E-18 T 14-10-2018 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SMART SM00387 897 1006 4.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SUPERFAMILY SSF52172 1025 1142 9.11E-20 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SUPERFAMILY SSF55874 843 1002 1.44E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 SMART SM00388 788 853 1.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Gene3D G3DSA:1.10.287.130 747 851 3.9E-14 T 14-10-2018 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 1.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12090 c3d823399de5ca88f1f0e0af44f9411b 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_11230 fd5809ea035b81c4a67ab944f8cd504c 81 SUPERFAMILY SSF64307 9 80 1.29E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily BJD94_11230 fd5809ea035b81c4a67ab944f8cd504c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.0E-22 T 14-10-2018 IPR001455 TusA-like domain BJD94_11230 fd5809ea035b81c4a67ab944f8cd504c 81 Gene3D G3DSA:3.30.110.40 5 80 1.2E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily BJD94_11230 fd5809ea035b81c4a67ab944f8cd504c 81 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.815 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 BJD94_11230 fd5809ea035b81c4a67ab944f8cd504c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain BJD94_12115 48fa4f17566e03f1d8ff770f7d314d88 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 3.7E-41 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_12115 48fa4f17566e03f1d8ff770f7d314d88 207 Pfam PF01914 MarC family integral membrane protein 3 204 1.5E-44 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 718 9.5E-83 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 SUPERFAMILY SSF56935 35 718 6.59E-86 T 14-10-2018 BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 Gene3D G3DSA:2.170.130.10 30 156 8.7E-21 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 1.3E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 Gene3D G3DSA:2.40.170.20 173 718 2.1E-46 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_17480 95dda930c4a886507b08b1f2a9dc7fce 718 Pfam PF00593 TonB dependent receptor 244 717 3.6E-27 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SUPERFAMILY SSF52540 171 430 1.32E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 59 1.0E-10 T 14-10-2018 IPR004176 Clp, N-terminal BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Gene3D G3DSA:3.40.50.300 443 656 5.6E-76 T 14-10-2018 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SMART SM01086 657 746 1.8E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Gene3D G3DSA:1.10.8.60 657 757 4.0E-31 T 14-10-2018 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SUPERFAMILY SSF81923 1 142 1.7E-58 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SMART SM00382 491 658 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SMART SM00382 210 355 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 SUPERFAMILY SSF52540 441 748 1.4E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Gene3D G3DSA:3.40.50.300 160 354 3.9E-62 T 14-10-2018 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Gene3D G3DSA:1.10.8.60 355 442 1.3E-34 T 14-10-2018 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 1.7E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Gene3D G3DSA:1.10.1780.10 1 143 5.0E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 331 6.8E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_01310 8aa79ec43cd1c26eecd0e95b694b54f6 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.5E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_11605 7a3e655ad1af6eb193238fa9a2110d98 191 Pfam PF03942 DTW domain 4 179 4.4E-41 T 14-10-2018 IPR005636 DTW BJD94_11605 7a3e655ad1af6eb193238fa9a2110d98 191 SMART SM01144 1 183 3.7E-48 T 14-10-2018 IPR005636 DTW BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 Gene3D G3DSA:1.10.287.130 377 478 1.3E-18 T 14-10-2018 BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 SUPERFAMILY SSF55874 474 636 1.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 Gene3D G3DSA:3.30.565.10 486 639 5.6E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 637 1.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 SMART SM00387 526 638 6.5E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 46 152 8.4E-32 T 14-10-2018 IPR033414 Periplasmic sensor domain BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 SUPERFAMILY SSF47384 396 460 6.87E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_15285 b0cfce4e62a2c7d9f64dd5eccb21b8f9 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 1.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 Gene3D G3DSA:3.40.50.2300 3 132 3.0E-25 T 14-10-2018 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 Gene3D G3DSA:1.10.10.10 148 211 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 SMART SM00421 147 204 5.0E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 SMART SM00448 5 119 5.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 Pfam PF00072 Response regulator receiver domain 7 119 6.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 SUPERFAMILY SSF52172 4 173 1.66E-25 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_12120 8cf3f08cbc908c712666b676b8a615d4 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 93 363 1.1E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 20 652 43.419 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 TIGRFAM TIGR01273 speA: arginine decarboxylase 24 651 1.4E-270 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 SUPERFAMILY SSF51419 83 365 1.62E-64 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 Gene3D G3DSA:2.40.37.10 31 589 1.2E-240 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PIRSF PIRSF001336 12 653 5.7E-257 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 Gene3D G3DSA:1.20.58.930 385 480 1.2E-240 T 14-10-2018 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 83 98 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 216 238 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 509 534 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 562 583 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 166 181 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 343 360 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 192 213 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 484 505 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01180 Arginine decarboxylase signature 107 121 2.8E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 115 133 1.1E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 562 575 1.1E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 259 272 1.1E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 353 372 1.1E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_02440 b63a70250cb5242ddcc265408ba9720c 653 Gene3D G3DSA:3.20.20.10 84 368 1.2E-240 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 Gene3D G3DSA:3.50.50.60 10 312 7.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.9E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 SUPERFAMILY SSF51905 2 313 5.96E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.9E-38 T 14-10-2018 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.9E-38 T 14-10-2018 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.9E-38 T 14-10-2018 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.9E-38 T 14-10-2018 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.9E-38 T 14-10-2018 BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 Gene3D G3DSA:3.50.50.60 118 244 7.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_04895 81ebf43612ead2ca8fa83292bfa08f81 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.8E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_09230 7020d4c9ff3b189cb25dd5552ca2604c 155 Gene3D G3DSA:3.40.140.10 34 155 2.3E-44 T 14-10-2018 BJD94_09230 7020d4c9ff3b189cb25dd5552ca2604c 155 SUPERFAMILY SSF102712 51 125 7.32E-6 T 14-10-2018 BJD94_09230 7020d4c9ff3b189cb25dd5552ca2604c 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 105 110 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BJD94_09230 7020d4c9ff3b189cb25dd5552ca2604c 155 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 155 1.5E-46 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 BJD94_09230 7020d4c9ff3b189cb25dd5552ca2604c 155 Pfam PF04002 RadC-like JAB domain 37 154 2.1E-45 T 14-10-2018 IPR025657 RadC-like JAB domain BJD94_20690 fe497ab8d97dce4ea47663f0f3cbeda0 198 PRINTS PR01021 OMPA domain signature 142 158 4.6E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_20690 fe497ab8d97dce4ea47663f0f3cbeda0 198 PRINTS PR01021 OMPA domain signature 127 142 4.6E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_20690 fe497ab8d97dce4ea47663f0f3cbeda0 198 SUPERFAMILY SSF103088 97 197 3.53E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_20690 fe497ab8d97dce4ea47663f0f3cbeda0 198 Gene3D G3DSA:3.30.1330.60 70 196 3.2E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_20690 fe497ab8d97dce4ea47663f0f3cbeda0 198 Pfam PF00691 OmpA family 99 191 2.8E-19 T 14-10-2018 IPR006665 OmpA-like domain BJD94_09405 493f0a83f223b2422f90ad497e434088 268 Gene3D G3DSA:3.40.50.150 1 198 3.3E-65 T 14-10-2018 BJD94_09405 493f0a83f223b2422f90ad497e434088 268 SUPERFAMILY SSF53335 7 264 1.64E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_09405 493f0a83f223b2422f90ad497e434088 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BJD94_09405 493f0a83f223b2422f90ad497e434088 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 8.2E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BJD94_09405 493f0a83f223b2422f90ad497e434088 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 1.3E-76 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BJD94_09405 493f0a83f223b2422f90ad497e434088 268 Gene3D G3DSA:1.10.8.100 200 266 3.1E-24 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BJD94_09405 493f0a83f223b2422f90ad497e434088 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.192 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BJD94_09405 493f0a83f223b2422f90ad497e434088 268 SMART SM00650 25 197 2.4E-88 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BJD94_09655 4e241cf31adac820ada71880b500cc83 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.0E-76 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BJD94_09655 4e241cf31adac820ada71880b500cc83 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 6.2E-86 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 8.2E-118 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 SUPERFAMILY SSF56784 6 260 1.2E-53 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 Gene3D G3DSA:3.40.50.1000 8 271 1.3E-96 T 14-10-2018 IPR023214 HAD superfamily BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 6.1E-9 T 14-10-2018 BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 Gene3D G3DSA:1.10.150.240 24 102 1.3E-96 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 140.855 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 BJD94_20175 9b164981ff62936dd5adc8e90ffd7ff4 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 3.3E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 SUPERFAMILY SSF55681 97 464 4.98E-94 T 14-10-2018 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.1E-80 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.768 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 Gene3D G3DSA:2.40.50.140 3 105 3.3E-19 T 14-10-2018 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 Gene3D G3DSA:3.30.930.10 109 465 2.9E-108 T 14-10-2018 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.8E-205 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BJD94_01965 dfb2ec11a18dcbc94b3a96b8880b3516 466 SUPERFAMILY SSF50249 15 101 6.0E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.539 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:3.40.50.300 94 382 5.0E-130 T 14-10-2018 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:1.20.150.20 383 513 1.6E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-43 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF47917 383 511 6.02E-45 T 14-10-2018 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 Gene3D G3DSA:2.40.30.20 1 93 4.3E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.7E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11080 2f1da5cb47d2bb0b69897fb1bd444af8 513 SUPERFAMILY SSF52540 96 381 1.16E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SMART SM01204 216 342 1.8E-17 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Gene3D G3DSA:3.30.70.270 400 573 2.3E-13 T 14-10-2018 BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SMART SM00897 27 215 1.0E-25 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SUPERFAMILY SSF55073 420 562 6.75E-8 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SUPERFAMILY SSF141868 599 825 3.4E-58 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 476 9.4E-7 T 14-10-2018 IPR000160 GGDEF domain BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Pfam PF10442 FIST C domain 216 341 1.6E-11 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Gene3D G3DSA:3.20.20.450 592 828 2.6E-59 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Pfam PF08495 FIST N domain 30 214 1.7E-18 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SMART SM00267 403 578 4.2E-4 T 14-10-2018 IPR000160 GGDEF domain BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 Pfam PF00563 EAL domain 599 825 2.9E-57 T 14-10-2018 IPR001633 EAL domain BJD94_11600 9d652632e9cf371499ece29db14acf8c 829 SMART SM00052 591 829 7.1E-32 T 14-10-2018 IPR001633 EAL domain BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Pfam PF02805 Metal binding domain of Ada 14 77 4.3E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SMART SM00342 108 189 4.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Pfam PF12833 Helix-turn-helix domain 112 190 4.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Pfam PF06029 AlkA N-terminal domain 202 319 6.1E-32 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Gene3D G3DSA:1.10.10.60 86 194 6.5E-24 T 14-10-2018 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SUPERFAMILY SSF46689 92 139 5.38E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Gene3D G3DSA:3.30.310.20 202 319 4.6E-21 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Gene3D G3DSA:3.40.10.10 4 79 1.6E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SUPERFAMILY SSF48150 311 459 1.62E-27 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 Gene3D G3DSA:1.10.340.30 320 420 5.3E-19 T 14-10-2018 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SUPERFAMILY SSF46689 144 191 5.38E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SMART SM01009 201 319 3.0E-25 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SUPERFAMILY SSF57884 7 91 7.72E-34 T 14-10-2018 IPR035451 Ada-like domain superfamily BJD94_18110 ef2bb044600ac81442402d90d219803a 461 SUPERFAMILY SSF55945 202 301 1.1E-24 T 14-10-2018 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:3.30.70.920 64 159 2.5E-24 T 14-10-2018 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF54909 74 158 8.98E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:1.10.10.10 1 63 3.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.5E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 SMART SM00344 12 121 4.3E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_05520 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07945 082afcf6306dd1ea3d20e875e6f5caac 281 SUPERFAMILY SSF53474 3 279 3.27E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_07945 082afcf6306dd1ea3d20e875e6f5caac 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 1.9E-119 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 BJD94_07945 082afcf6306dd1ea3d20e875e6f5caac 281 Pfam PF00756 Putative esterase 23 273 6.2E-61 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BJD94_07945 082afcf6306dd1ea3d20e875e6f5caac 281 Gene3D G3DSA:3.40.50.1820 4 281 1.5E-97 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 SUPERFAMILY SSF55073 483 635 6.75E-42 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 Gene3D G3DSA:1.20.1480.50 144 237 9.2E-7 T 14-10-2018 BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 Gene3D G3DSA:3.30.70.270 472 639 1.0E-49 T 14-10-2018 BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 SMART SM00267 467 633 1.7E-47 T 14-10-2018 IPR000160 GGDEF domain BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 Pfam PF17152 Periplasmic sensor domain 50 142 9.2E-7 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 3.4E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 Gene3D G3DSA:3.30.450.20 238 360 8.9E-7 T 14-10-2018 BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 631 1.1E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_19255 fe93d6fc34e39e52273bc53207727f03 639 SMART SM00304 180 233 0.0072 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Gene3D G3DSA:1.10.760.10 39 186 2.3E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Gene3D G3DSA:1.10.760.10 37 310 2.3E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 6.7E-48 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 Pfam PF00034 Cytochrome c 195 304 2.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 SUPERFAMILY SSF46626 25 174 8.27E-47 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 PIRSF PIRSF000294 3 328 6.0E-122 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 BJD94_17165 16f61a319ffd216c3f9e7a6c81c7ac7d 328 SUPERFAMILY SSF46626 173 324 1.97E-41 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 3.2E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SMART SM00226 3 145 4.4E-52 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Gene3D G3DSA:3.40.50.2300 1 146 8.0E-51 T 14-10-2018 BJD94_10005 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SUPERFAMILY SSF52788 1 146 1.05E-41 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BJD94_16610 59b8af2910dc6a8f817898f707703327 231 Gene3D G3DSA:3.90.470.20 29 131 3.0E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_16610 59b8af2910dc6a8f817898f707703327 231 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 203 1.2E-11 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_16610 59b8af2910dc6a8f817898f707703327 231 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 3.2E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BJD94_16610 59b8af2910dc6a8f817898f707703327 231 PRINTS PR01399 Enterobactin synthetase component D signature 77 95 3.2E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BJD94_16610 59b8af2910dc6a8f817898f707703327 231 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 3.2E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 BJD94_16610 59b8af2910dc6a8f817898f707703327 231 SUPERFAMILY SSF56214 110 223 1.19E-12 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF47757 8 72 9.02E-6 T 14-10-2018 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 269 2.4E-40 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF53335 77 256 5.86E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 SMART SM00138 11 274 4.2E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 Gene3D G3DSA:3.40.50.150 76 276 4.5E-58 T 14-10-2018 BJD94_21850 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF03705 CheR methyltransferase, all-alpha domain 13 63 5.7E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 198 384 3.02E-46 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.0E-150 T 14-10-2018 IPR020823 Cell division protein FtsA BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 PIRSF PIRSF003101 1 420 1.5E-147 T 14-10-2018 IPR020823 Cell division protein FtsA BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 8 221 1.71E-59 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.90.640.10 235 300 8.4E-112 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 13 379 8.4E-112 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 SMART SM00842 10 196 3.3E-94 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 197 359 8.4E-112 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.1490.110 87 169 8.4E-112 T 14-10-2018 BJD94_08875 d0dec83904f7f6393afa5c6d9be114a5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.297 T 14-10-2018 IPR020823 Cell division protein FtsA BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:1.20.120.160 666 780 1.6E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SUPERFAMILY SSF52172 527 642 1.57E-25 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SMART SM00091 155 221 2.5E-7 T 14-10-2018 IPR000014 PAS domain BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:1.10.287.970 1 89 3.6E-39 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:3.30.450.20 150 267 2.1E-22 T 14-10-2018 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Pfam PF08448 PAS fold 162 271 4.6E-18 T 14-10-2018 IPR013656 PAS fold-4 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SUPERFAMILY SSF55785 140 267 2.44E-25 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:1.10.287.130 268 345 3.3E-22 T 14-10-2018 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.2E-18 T 14-10-2018 IPR000014 PAS domain BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SUPERFAMILY SSF47384 270 347 8.83E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SUPERFAMILY SSF47226 666 779 6.93E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Pfam PF00072 Response regulator receiver domain 529 638 1.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:3.40.50.2300 523 665 1.2E-27 T 14-10-2018 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SMART SM00448 527 638 3.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SUPERFAMILY SSF55874 336 507 1.11E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 PIRSF PIRSF003182 1 780 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SMART SM00387 394 510 8.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SMART SM00388 282 347 1.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Pfam PF01627 Hpt domain 691 764 1.5E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 SMART SM00073 680 777 5.0E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Gene3D G3DSA:3.30.565.10 348 513 5.5E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08760 9c6736cd5923ef0a3ae42af1bba1d94d 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 5.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 8.7E-74 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD94_00650 c775fd835389e64bfcecbaa075d77ed8 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 3.0E-56 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 252 1.5E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 276 2.7E-87 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 Gene3D G3DSA:3.40.1010.10 40 157 3.2E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 Gene3D G3DSA:3.30.950.10 158 294 6.7E-36 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_14985 7d469604fbb3a20ceac66b7d889d9d28 297 SUPERFAMILY SSF53790 41 280 7.2E-70 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD94_03655 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03655 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03355 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03355 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03400 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03400 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_02865 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_02865 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_02890 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_02890 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03275 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03275 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03500 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03500 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03140 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03140 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03080 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03080 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03620 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03620 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_03630 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 4.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 BJD94_03630 c81de93cb1dde686943adca8f4a3144a 314 Pfam PF01548 Transposase 11 150 4.9E-19 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 SUPERFAMILY SSF158544 219 287 4.97E-20 T 14-10-2018 IPR038072 GspK, central domain superfamily BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 Pfam PF03934 Type II secretion system (T2SS), protein K 34 321 1.9E-87 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 SUPERFAMILY SSF158544 105 217 1.05E-29 T 14-10-2018 IPR038072 GspK, central domain superfamily BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 SUPERFAMILY SSF54523 40 329 8.0E-36 T 14-10-2018 BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 PIRSF PIRSF002786 4 332 1.7E-65 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 Gene3D G3DSA:3.30.1300.30 46 313 2.0E-88 T 14-10-2018 BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 Gene3D G3DSA:1.10.40.60 103 219 2.0E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily BJD94_10445 f7640be68b260e40a4e6b35ed35fd860 340 Gene3D G3DSA:1.10.40.60 220 289 2.0E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 SUPERFAMILY SSF53335 157 323 3.82E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 Pfam PF05175 Methyltransferase small domain 172 336 2.7E-61 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 47.081 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 Gene3D G3DSA:3.40.50.150 1 157 3.5E-51 T 14-10-2018 BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 Gene3D G3DSA:3.40.50.150 158 340 1.8E-43 T 14-10-2018 BJD94_14205 9d036669ef0a40ba980b394d58841d88 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 7.7E-58 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 BJD94_00750 f5c95431b5309b3b120d69701a957a1a 184 Pfam PF08534 Redoxin 41 164 1.1E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BJD94_00750 f5c95431b5309b3b120d69701a957a1a 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_00750 f5c95431b5309b3b120d69701a957a1a 184 Gene3D G3DSA:3.40.30.10 19 184 4.2E-45 T 14-10-2018 BJD94_00750 f5c95431b5309b3b120d69701a957a1a 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 2.6E-72 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BJD94_00750 f5c95431b5309b3b120d69701a957a1a 184 SUPERFAMILY SSF52833 46 178 5.0E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_01910 93541abca2f9221183912c734b3ec54b 212 SUPERFAMILY SSF52172 4 135 5.69E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_01910 93541abca2f9221183912c734b3ec54b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 SMART SM00448 5 118 7.9E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 Pfam PF00072 Response regulator receiver domain 7 119 2.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 SUPERFAMILY SSF46894 139 211 5.44E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 SMART SM00421 148 205 2.5E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01910 93541abca2f9221183912c734b3ec54b 212 Gene3D G3DSA:3.40.50.12740 5 211 2.2E-67 T 14-10-2018 BJD94_17170 721907ee3f05b07f1964261ad8d8d537 133 Pfam PF06942 GlpM protein 24 129 1.5E-50 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC BJD94_17170 721907ee3f05b07f1964261ad8d8d537 133 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 40 129 7.0E-34 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 Gene3D G3DSA:3.60.150.10 1 361 5.7E-162 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 Pfam PF01264 Chorismate synthase 10 345 2.0E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.7E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 PIRSF PIRSF001456 3 360 4.3E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 SUPERFAMILY SSF103263 4 354 3.79E-151 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.984 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_00820 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD94_20510 bc12e6a876ed6790b88a892e2345aff1 335 PIRSF PIRSF017617 1 334 3.6E-132 T 14-10-2018 IPR023603 Threonine aldolase BJD94_20510 bc12e6a876ed6790b88a892e2345aff1 335 Gene3D G3DSA:3.40.640.10 1 243 2.3E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20510 bc12e6a876ed6790b88a892e2345aff1 335 Gene3D G3DSA:3.90.1150.10 244 334 9.7E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_20510 bc12e6a876ed6790b88a892e2345aff1 335 SUPERFAMILY SSF53383 1 334 2.79E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20510 bc12e6a876ed6790b88a892e2345aff1 335 Pfam PF01212 Beta-eliminating lyase 2 283 7.7E-100 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 BJD94_04425 c36b4225160f3bf02ace037e37701acc 365 Gene3D G3DSA:1.10.3720.10 147 363 1.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04425 c36b4225160f3bf02ace037e37701acc 365 SUPERFAMILY SSF161098 155 346 1.57E-40 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04425 c36b4225160f3bf02ace037e37701acc 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_04425 c36b4225160f3bf02ace037e37701acc 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.6E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_07445 38c388b301d4cf6dae234a4815f74392 269 Gene3D G3DSA:1.25.40.10 168 265 7.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07445 38c388b301d4cf6dae234a4815f74392 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 4.9E-44 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_07445 38c388b301d4cf6dae234a4815f74392 269 Pfam PF13371 Tetratricopeptide repeat 187 259 4.8E-24 T 14-10-2018 BJD94_07445 38c388b301d4cf6dae234a4815f74392 269 SUPERFAMILY SSF48452 190 263 6.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_00125 a37564683501fb39b5767d777afa1193 639 SMART SM00487 14 210 4.5E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_00125 a37564683501fb39b5767d777afa1193 639 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site BJD94_00125 a37564683501fb39b5767d777afa1193 639 Gene3D G3DSA:3.40.50.300 202 387 1.6E-47 T 14-10-2018 BJD94_00125 a37564683501fb39b5767d777afa1193 639 Pfam PF16124 RecQ zinc-binding 512 558 9.0E-8 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BJD94_00125 a37564683501fb39b5767d777afa1193 639 Pfam PF00270 DEAD/DEAH box helicase 21 180 3.6E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_00125 a37564683501fb39b5767d777afa1193 639 Gene3D G3DSA:1.10.10.10 499 638 3.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_00125 a37564683501fb39b5767d777afa1193 639 Pfam PF00271 Helicase conserved C-terminal domain 216 324 2.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_00125 a37564683501fb39b5767d777afa1193 639 Gene3D G3DSA:3.40.50.300 1 200 2.7E-69 T 14-10-2018 BJD94_00125 a37564683501fb39b5767d777afa1193 639 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 349 3.9E-113 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BJD94_00125 a37564683501fb39b5767d777afa1193 639 SUPERFAMILY SSF52540 59 341 1.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00125 a37564683501fb39b5767d777afa1193 639 SMART SM00490 244 325 6.5E-25 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_14980 7fe76efcd235fcfdcfb80f1eb2226baa 321 SUPERFAMILY SSF52418 75 316 1.22E-41 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14980 7fe76efcd235fcfdcfb80f1eb2226baa 321 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 67 8.5E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14980 7fe76efcd235fcfdcfb80f1eb2226baa 321 Gene3D G3DSA:3.40.1030.10 72 314 7.6E-40 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14980 7fe76efcd235fcfdcfb80f1eb2226baa 321 Gene3D G3DSA:1.20.970.10 3 71 4.2E-17 T 14-10-2018 BJD94_14980 7fe76efcd235fcfdcfb80f1eb2226baa 321 SUPERFAMILY SSF47648 8 71 2.09E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Gene3D G3DSA:1.20.1330.10 44 326 1.8E-77 T 14-10-2018 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 3.7E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 SUPERFAMILY SSF64518 1 375 6.15E-96 T 14-10-2018 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Pfam PF07196 Flagellin hook IN motif 193 248 1.3E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Gene3D G3DSA:3.30.70.2120 174 274 1.8E-77 T 14-10-2018 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 Gene3D G3DSA:1.10.8.410 327 375 2.5E-20 T 14-10-2018 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00545 7c915e62151d279d8fcd8d73196bdf1a 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_11185 764c63847525987670df56103cfa7101 805 SMART SM00387 31 175 1.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_11185 764c63847525987670df56103cfa7101 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 4.6E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 Gene3D G3DSA:3.30.230.10 221 393 8.5E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 7.5E-71 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 Gene3D G3DSA:3.40.50.670 706 804 4.5E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_11185 764c63847525987670df56103cfa7101 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.893 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 Gene3D G3DSA:3.30.565.10 1 220 1.3E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_11185 764c63847525987670df56103cfa7101 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_11185 764c63847525987670df56103cfa7101 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 14-10-2018 IPR006171 TOPRIM domain BJD94_11185 764c63847525987670df56103cfa7101 805 SUPERFAMILY SSF56719 395 796 7.32E-88 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_11185 764c63847525987670df56103cfa7101 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 1.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 4.5E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_11185 764c63847525987670df56103cfa7101 805 Gene3D G3DSA:3.10.20.690 593 684 5.5E-35 T 14-10-2018 BJD94_11185 764c63847525987670df56103cfa7101 805 Gene3D G3DSA:3.40.50.670 399 571 3.6E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_11185 764c63847525987670df56103cfa7101 805 SUPERFAMILY SSF54211 221 393 5.31E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_11185 764c63847525987670df56103cfa7101 805 SUPERFAMILY SSF55874 4 213 3.27E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_11185 764c63847525987670df56103cfa7101 805 SMART SM00433 35 798 8.1E-273 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_11185 764c63847525987670df56103cfa7101 805 Pfam PF00204 DNA gyrase B 221 391 3.6E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 Gene3D G3DSA:1.10.10.1710 450 516 4.2E-27 T 14-10-2018 BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 SUPERFAMILY SSF48173 230 499 6.8E-62 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 Gene3D G3DSA:3.40.50.620 8 231 1.0E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 Gene3D G3DSA:1.10.579.10 329 449 1.8E-53 T 14-10-2018 BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 Gene3D G3DSA:1.25.40.80 132 325 1.0E-100 T 14-10-2018 BJD94_17105 81cecb01442f577619adc0cd704e1cbc 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 1.8E-68 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 2.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 Gene3D G3DSA:1.10.10.10 1 57 3.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 SUPERFAMILY SSF48008 62 202 4.97E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 SUPERFAMILY SSF46785 2 66 7.82E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 Gene3D G3DSA:1.20.120.530 60 206 1.1E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 SMART SM00345 1 56 1.3E-4 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 Pfam PF07729 FCD domain 66 195 4.9E-14 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_09315 a7a540b22e196cb73709e0b2cd46a061 208 SMART SM00895 66 196 5.3E-7 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:2.40.30.170 333 417 7.4E-14 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Pfam PF13533 Biotin-lipoyl like 55 94 4.1E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:1.10.287.470 220 295 7.4E-14 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:2.40.50.100 54 87 9.0E-8 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:2.40.50.100 209 332 7.4E-14 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:1.10.287.470 88 184 9.0E-8 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 8.5E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Gene3D G3DSA:2.40.30.170 42 52 9.0E-8 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 441 2.4E-112 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 SUPERFAMILY SSF111369 57 127 6.67E-6 T 14-10-2018 BJD94_19460 a5d665068a67dd57d951fe8194ba6e8b 442 Pfam PF13437 HlyD family secretion protein 296 394 1.9E-16 T 14-10-2018 BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 SUPERFAMILY SSF69593 54 243 2.88E-8 T 14-10-2018 BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 SUPERFAMILY SSF55729 315 455 1.22E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 Pfam PF01553 Acyltransferase 66 193 5.1E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 Pfam PF13444 Acetyltransferase (GNAT) domain 333 433 7.2E-21 T 14-10-2018 BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 SMART SM00563 75 199 1.4E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_09290 5f47b093a23a68c791b2eb12e48121e7 585 Gene3D G3DSA:3.40.630.30 334 457 1.9E-7 T 14-10-2018 BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 SUPERFAMILY SSF69786 4 96 1.22E-31 T 14-10-2018 IPR036591 YggU-like superfamily BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.538 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 Gene3D G3DSA:3.30.1200.10 1 96 5.5E-34 T 14-10-2018 IPR036591 YggU-like superfamily BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 SMART SM01152 8 84 2.4E-35 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 91 1.1E-25 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 BJD94_13470 cd407ceb50eb49d3f892daa8189c2614 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 3.1E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 117 6.3E-40 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 SUPERFAMILY SSF46785 1 120 9.1E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 155 46.699 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 Gene3D G3DSA:1.10.10.10 1 131 3.0E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 Pfam PF02082 Transcriptional regulator 1 70 6.9E-21 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BJD94_08240 59721eadca356bba21e5439d1ec0952a 155 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 36 54 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BJD94_21840 e1b256ee72dbf86cde3f35343a584477 225 Pfam PF01575 MaoC like domain 82 200 7.1E-23 T 14-10-2018 IPR002539 MaoC-like dehydratase domain BJD94_21840 e1b256ee72dbf86cde3f35343a584477 225 Gene3D G3DSA:3.10.129.10 76 223 4.1E-35 T 14-10-2018 BJD94_21840 e1b256ee72dbf86cde3f35343a584477 225 SUPERFAMILY SSF54637 79 218 2.68E-28 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_19865 d8caf91484cd2a288e8573c6316b975b 174 SUPERFAMILY SSF52374 1 171 9.38E-25 T 14-10-2018 BJD94_19865 d8caf91484cd2a288e8573c6316b975b 174 Gene3D G3DSA:3.40.50.620 1 173 1.7E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_19865 d8caf91484cd2a288e8573c6316b975b 174 Pfam PF01467 Cytidylyltransferase-like 7 143 2.2E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Gene3D G3DSA:3.30.450.20 62 173 6.9E-70 T 14-10-2018 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 589 1.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Gene3D G3DSA:1.10.287.950 292 623 2.1E-70 T 14-10-2018 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 SUPERFAMILY SSF103190 56 184 1.46E-17 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 SMART SM00283 361 622 3.3E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Pfam PF00672 HAMP domain 292 342 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 SMART SM00304 292 346 9.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Gene3D G3DSA:3.30.450.20 49 266 6.9E-70 T 14-10-2018 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 SUPERFAMILY SSF58104 314 621 3.79E-76 T 14-10-2018 BJD94_19990 bb9afa5d4292b578a1ac4a6abd2d4687 623 Pfam PF02743 Cache domain 32 254 2.4E-29 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 SUPERFAMILY SSF54631 140 272 7.71E-15 T 14-10-2018 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 SMART SM00924 34 137 3.5E-9 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 SUPERFAMILY SSF158791 34 132 3.27E-12 T 14-10-2018 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 Gene3D G3DSA:3.10.580.10 133 258 7.5E-34 T 14-10-2018 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 Pfam PF01769 Divalent cation transporter 319 440 7.8E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 Gene3D G3DSA:1.10.357.20 274 447 1.5E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 SUPERFAMILY SSF161093 276 447 2.62E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BJD94_16400 43d0f7b422b1ff7d8da4fcaa80f05503 448 Pfam PF03448 MgtE intracellular N domain 36 135 2.5E-13 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Gene3D G3DSA:3.30.930.10 11 465 7.8E-235 T 14-10-2018 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.1E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 SUPERFAMILY SSF52954 463 570 1.39E-33 T 14-10-2018 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 PIRSF PIRSF001535 1 571 7.2E-267 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 SUPERFAMILY SSF55826 218 390 6.8E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.109 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 3.9E-247 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.9E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Gene3D G3DSA:3.90.960.10 240 389 7.8E-235 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Gene3D G3DSA:3.40.50.800 4 554 7.8E-235 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 SUPERFAMILY SSF55681 10 478 5.72E-97 T 14-10-2018 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 Pfam PF03129 Anticodon binding domain 475 568 3.4E-22 T 14-10-2018 IPR004154 Anticodon-binding BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD94_00160 e47c98e2709c1506ab1de000461676d5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 Gene3D G3DSA:1.10.10.10 5 90 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 Pfam PF03466 LysR substrate binding domain 122 291 8.6E-13 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 SUPERFAMILY SSF46785 6 86 2.28E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 SUPERFAMILY SSF53850 96 291 1.77E-16 T 14-10-2018 BJD94_21515 54715043e726092b7b97bb59c8cbfb63 295 Gene3D G3DSA:3.40.190.290 133 289 1.0E-6 T 14-10-2018 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 PIRSF PIRSF001492 1 510 1.3E-201 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.079 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 Gene3D G3DSA:3.40.720.10 6 509 9.3E-208 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 SUPERFAMILY SSF53649 4 509 3.27E-75 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 Pfam PF01676 Metalloenzyme superfamily 5 498 3.9E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 1.7E-226 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.7E-78 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 SUPERFAMILY SSF64158 78 308 9.94E-80 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_12290 643ba6fa9ae721da84824adc5165980d 510 Gene3D G3DSA:3.40.1450.10 78 310 9.3E-208 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 Gene3D G3DSA:2.60.40.10 258 350 5.8E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 Gene3D G3DSA:2.60.40.10 158 248 1.7E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 Gene3D G3DSA:2.60.40.10 351 447 1.7E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 SUPERFAMILY SSF51055 458 508 3.53E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 Gene3D G3DSA:2.10.10.20 455 508 2.4E-12 T 14-10-2018 BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 SMART SM00495 463 504 1.9E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_16570 9c17309b5c7de9dae7330842131de794 1206 Pfam PF14600 Cellulose-binding domain 455 508 9.6E-14 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 SUPERFAMILY SSF54631 144 276 1.23E-17 T 14-10-2018 BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 SMART SM00100 11 128 7.4E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 SUPERFAMILY SSF51206 8 128 4.06E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.6E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.6E-38 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 Gene3D G3DSA:2.60.120.10 5 139 1.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 432 8.9E-42 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 BJD94_12080 34b8ca76a134c8333c76d682faac7da0 608 Gene3D G3DSA:3.10.580.10 140 288 8.8E-19 T 14-10-2018 BJD94_09830 e698602af47920c53e7df89f310696a3 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.1E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BJD94_09830 e698602af47920c53e7df89f310696a3 123 Gene3D G3DSA:2.40.150.20 1 123 1.4E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09830 e698602af47920c53e7df89f310696a3 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09830 e698602af47920c53e7df89f310696a3 123 SUPERFAMILY SSF50193 2 122 3.92E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09830 e698602af47920c53e7df89f310696a3 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.6E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD94_09830 e698602af47920c53e7df89f310696a3 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.421 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD94_09830 e698602af47920c53e7df89f310696a3 123 SMART SM01374 1 123 2.0E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 Gene3D G3DSA:3.40.50.300 1 172 9.1E-56 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.411 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 7 22 5.2E-29 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 77 86 5.2E-29 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 31 44 5.2E-29 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 98 115 5.2E-29 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 59 67 5.2E-29 T 14-10-2018 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 Pfam PF01202 Shikimate kinase 13 169 2.6E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD94_12805 16bec5c746d63037086bc4b6f7de01a3 172 SUPERFAMILY SSF52540 4 169 4.26E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06675 60fc4560e2ac90911ba0658028921563 478 Gene3D G3DSA:1.10.287.130 225 332 8.3E-17 T 14-10-2018 BJD94_06675 60fc4560e2ac90911ba0658028921563 478 SMART SM00304 221 273 2.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_06675 60fc4560e2ac90911ba0658028921563 478 SUPERFAMILY SSF55874 333 474 6.42E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06675 60fc4560e2ac90911ba0658028921563 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 473 2.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06675 60fc4560e2ac90911ba0658028921563 478 SMART SM00387 371 476 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06675 60fc4560e2ac90911ba0658028921563 478 Gene3D G3DSA:3.30.565.10 335 476 8.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06675 60fc4560e2ac90911ba0658028921563 478 SUPERFAMILY SSF47384 258 322 1.47E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_06675 60fc4560e2ac90911ba0658028921563 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06675 60fc4560e2ac90911ba0658028921563 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06675 60fc4560e2ac90911ba0658028921563 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_15940 90d524ab48fa027e1e9798bf89b19b2b 307 Gene3D G3DSA:1.20.1510.10 18 234 4.1E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_15940 90d524ab48fa027e1e9798bf89b19b2b 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 306 3.9E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_15940 90d524ab48fa027e1e9798bf89b19b2b 307 Pfam PF01545 Cation efflux family 22 234 1.7E-37 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_15940 90d524ab48fa027e1e9798bf89b19b2b 307 SUPERFAMILY SSF161111 14 235 4.71E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:2.40.30.170 341 430 3.8E-10 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:2.40.50.100 298 340 3.8E-10 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 37 453 1.0E-135 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:1.10.287.470 113 195 1.4E-5 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:1.10.287.470 238 297 3.8E-10 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:2.40.30.170 66 78 1.4E-5 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Pfam PF13533 Biotin-lipoyl like 87 112 3.3E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_15370 6f801714646995f3ec404f7851035a65 453 Pfam PF13437 HlyD family secretion protein 305 420 2.2E-19 T 14-10-2018 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 432 452 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 432 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 1.5E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15370 6f801714646995f3ec404f7851035a65 453 Gene3D G3DSA:2.40.50.100 79 209 1.4E-5 T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 Gene3D G3DSA:1.10.260.40 1 59 7.9E-21 T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 SMART SM00354 1 71 9.9E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 Gene3D G3DSA:3.40.50.2300 60 303 8.3E-68 T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.2E-33 T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 SUPERFAMILY SSF47413 1 59 1.03E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 SUPERFAMILY SSF53822 61 333 3.93E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 Gene3D G3DSA:3.40.50.2300 160 289 8.3E-68 T 14-10-2018 BJD94_18650 000dd368eb476d19feba508a7c349eaa 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Gene3D G3DSA:3.40.50.300 131 314 2.5E-63 T 14-10-2018 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_06630 b8279388dd357e100843f763a87ac49f 446 SMART SM00382 164 307 5.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06630 b8279388dd357e100843f763a87ac49f 446 SUPERFAMILY SSF52172 4 188 9.39E-38 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Pfam PF00158 Sigma-54 interaction domain 144 310 1.5E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 SMART SM00448 2 114 9.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 SUPERFAMILY SSF46689 387 440 1.16E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 5.2E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 SUPERFAMILY SSF52540 144 373 7.79E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Pfam PF00072 Response regulator receiver domain 5 114 3.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Gene3D G3DSA:1.10.8.60 315 390 1.4E-19 T 14-10-2018 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Gene3D G3DSA:1.10.10.60 391 442 5.7E-13 T 14-10-2018 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_06630 b8279388dd357e100843f763a87ac49f 446 Gene3D G3DSA:3.40.50.2300 1 129 3.0E-35 T 14-10-2018 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 SUPERFAMILY SSF52096 2 304 6.76E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 SUPERFAMILY SSF48179 625 715 3.57E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.6E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 SUPERFAMILY SSF51735 314 496 2.35E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Gene3D G3DSA:1.10.1040.50 498 710 3.6E-75 T 14-10-2018 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 SUPERFAMILY SSF48179 496 607 2.89E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Gene3D G3DSA:3.90.226.10 1 312 1.4E-90 T 14-10-2018 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 712 7.1E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.3E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.585 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 209 8.0E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD94_11255 88419fb61d370a158bfb8660d76ab87e 723 Gene3D G3DSA:3.40.50.720 314 497 1.2E-64 T 14-10-2018 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 Gene3D G3DSA:3.40.50.2300 2 120 1.2E-32 T 14-10-2018 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 Pfam PF00072 Response regulator receiver domain 8 115 3.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 SUPERFAMILY SSF52172 3 126 1.71E-35 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 SMART SM00448 5 115 2.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 6.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 SMART SM00862 151 227 4.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 SUPERFAMILY SSF46894 128 229 2.01E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_19085 415c2b7afb8b2b7ed970af7b418e5c30 234 Gene3D G3DSA:1.10.10.10 121 234 5.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82693 40 135 4.58E-20 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:1.20.1640.10 10 508 4.3E-265 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82693 136 325 5.58E-22 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.2090.10 706 796 4.3E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.70.1430 40 804 4.3E-265 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 1.6E-176 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82714 708 788 1.09E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.2090.10 179 270 4.3E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82714 184 266 1.96E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:1.20.1640.10 509 1008 4.3E-265 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.70.1320 135 328 4.3E-265 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82866 292 491 2.09E-37 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.70.1440 655 856 4.3E-265 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 SUPERFAMILY SSF82866 795 1015 5.1E-44 T 14-10-2018 BJD94_21165 a770e10af345da5ad3fe48626cf80bc8 1019 Gene3D G3DSA:3.30.70.1430 556 654 4.3E-265 T 14-10-2018 BJD94_13905 6e47003585653eb43f324a22dcbb6071 521 Gene3D G3DSA:3.30.590.20 17 521 7.7E-192 T 14-10-2018 BJD94_13905 6e47003585653eb43f324a22dcbb6071 521 SUPERFAMILY SSF55931 8 514 2.35E-200 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD94_13905 6e47003585653eb43f324a22dcbb6071 521 Pfam PF04262 Glutamate-cysteine ligase 14 378 4.8E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD94_13905 6e47003585653eb43f324a22dcbb6071 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 220.964 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD94_13905 6e47003585653eb43f324a22dcbb6071 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 516 5.6E-206 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD94_13665 49f923ddf3c55b8036e650123ecf8082 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 1.9E-20 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal BJD94_13665 49f923ddf3c55b8036e650123ecf8082 206 SUPERFAMILY SSF89069 4 67 6.28E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BJD94_13665 49f923ddf3c55b8036e650123ecf8082 206 PIRSF PIRSF016938 1 194 3.8E-31 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 BJD94_13665 49f923ddf3c55b8036e650123ecf8082 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 95 1.3E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BJD94_13665 49f923ddf3c55b8036e650123ecf8082 206 Gene3D G3DSA:1.10.10.880 2 67 1.9E-23 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 Gene3D G3DSA:1.20.1050.10 93 222 4.3E-41 T 14-10-2018 BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 SUPERFAMILY SSF52833 4 89 6.28E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.1E-78 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 SUPERFAMILY SSF47616 96 219 1.36E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 Gene3D G3DSA:3.40.30.10 7 83 1.2E-23 T 14-10-2018 BJD94_04685 a9a706b9cc6f1724b0fd31dd90cfdc1a 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 83 2.5E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_18880 ceffd2bd526cd225c214125c141a5923 573 Gene3D G3DSA:3.40.190.10 99 312 4.2E-24 T 14-10-2018 BJD94_18880 ceffd2bd526cd225c214125c141a5923 573 Pfam PF12793 Sugar transport-related sRNA regulator N-term 20 100 5.1E-15 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BJD94_18880 ceffd2bd526cd225c214125c141a5923 573 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 174 306 4.7E-15 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_18880 ceffd2bd526cd225c214125c141a5923 573 SUPERFAMILY SSF53850 117 568 3.26E-44 T 14-10-2018 BJD94_18880 ceffd2bd526cd225c214125c141a5923 573 Gene3D G3DSA:3.10.105.10 387 541 9.0E-6 T 14-10-2018 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Pfam PF08206 Ribonuclease B OB domain 24 80 1.0E-17 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SMART SM00357 23 79 3.8E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SUPERFAMILY SSF50249 568 649 1.62E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SMART SM00316 566 650 2.8E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Gene3D G3DSA:2.40.50.140 1 82 1.0E-27 T 14-10-2018 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Pfam PF00575 S1 RNA binding domain 570 645 1.2E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SUPERFAMILY SSF50249 186 563 1.16E-107 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Gene3D G3DSA:2.40.50.140 565 651 7.1E-33 T 14-10-2018 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Pfam PF00773 RNB domain 193 521 6.9E-87 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 8.2E-185 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Gene3D G3DSA:2.40.50.640 83 157 3.3E-30 T 14-10-2018 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SUPERFAMILY SSF50249 8 80 1.86E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SUPERFAMILY SSF50249 83 173 6.97E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 43.006 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BJD94_20915 8228b67124efc271bc8c6e52eaebb80e 664 SMART SM00955 193 523 2.3E-115 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 SMART SM00448 4 115 3.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 SUPERFAMILY SSF46689 342 462 6.27E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 SUPERFAMILY SSF52540 135 370 8.57E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 SMART SM00382 149 296 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Gene3D G3DSA:3.40.50.300 120 300 1.3E-64 T 14-10-2018 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Gene3D G3DSA:1.10.10.60 404 467 1.5E-9 T 14-10-2018 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-33 T 14-10-2018 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Gene3D G3DSA:1.10.8.60 301 379 1.8E-30 T 14-10-2018 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 SUPERFAMILY SSF52172 3 173 4.98E-40 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Pfam PF00158 Sigma-54 interaction domain 134 295 3.4E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_00580 114863e040e4339dc0495cf8241cae5b 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.4E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_10315 80334029d72cdb9c96cd6350ffbf33a6 862 SUPERFAMILY SSF56935 26 862 1.22E-94 T 14-10-2018 BJD94_10315 80334029d72cdb9c96cd6350ffbf33a6 862 Pfam PF00593 TonB dependent receptor 337 860 8.8E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_10315 80334029d72cdb9c96cd6350ffbf33a6 862 Gene3D G3DSA:2.170.130.10 31 171 1.3E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_10315 80334029d72cdb9c96cd6350ffbf33a6 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 167 1.4E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_10315 80334029d72cdb9c96cd6350ffbf33a6 862 Gene3D G3DSA:2.40.170.20 227 862 1.2E-55 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 Gene3D G3DSA:3.40.930.10 1 152 3.9E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 8.0E-39 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 SUPERFAMILY SSF52794 525 618 3.31E-28 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 3.0E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 SUPERFAMILY SSF55804 3 146 9.55E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 1.5E-27 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 Gene3D G3DSA:3.40.50.2300 520 621 1.5E-33 T 14-10-2018 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 1.6E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 Pfam PF02378 Phosphotransferase system, EIIC 188 446 1.2E-12 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_18805 d09e8052e26b1fe6c3cb2c0dcc6fb92e 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 175 496 1.6E-78 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD94_13705 f028a40c7add705a3467e67e88a709a1 243 SUPERFAMILY SSF63892 4 241 2.09E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD94_13705 f028a40c7add705a3467e67e88a709a1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.521 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD94_13705 f028a40c7add705a3467e67e88a709a1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.3E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD94_13705 f028a40c7add705a3467e67e88a709a1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD94_13705 f028a40c7add705a3467e67e88a709a1 243 Gene3D G3DSA:3.20.20.70 1 243 8.9E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 Pfam PF01546 Peptidase family M20/M25/M40 74 370 5.7E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 Gene3D G3DSA:3.40.630.10 11 361 1.2E-104 T 14-10-2018 BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 SUPERFAMILY SSF55031 177 284 1.7E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 Pfam PF07687 Peptidase dimerisation domain 175 273 6.9E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 SUPERFAMILY SSF53187 2 373 8.86E-38 T 14-10-2018 BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 PIRSF PIRSF037238 1 373 1.2E-145 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase BJD94_16890 7b713e3567be1095a603bb87e8c43f41 374 Gene3D G3DSA:3.30.70.360 177 286 1.2E-104 T 14-10-2018 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 559 6.6E-80 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 224 1.7E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 SUPERFAMILY SSF56519 65 237 2.88E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 22 574 45.235 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Gene3D G3DSA:3.40.710.10 299 481 9.2E-107 T 14-10-2018 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 SUPERFAMILY SSF56601 239 570 2.32E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Gene3D G3DSA:3.90.1310.30 62 237 3.5E-45 T 14-10-2018 BJD94_08920 07bdb596599ad1074b8fa62c5d3d9e45 576 Gene3D G3DSA:3.30.450.330 239 563 9.2E-107 T 14-10-2018 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 Pfam PF02274 Amidinotransferase 18 403 2.3E-111 T 14-10-2018 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PIRSF PIRSF006356 1 406 7.6E-159 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 SUPERFAMILY SSF55909 3 406 1.96E-129 T 14-10-2018 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 Gene3D G3DSA:3.75.10.10 6 403 7.6E-147 T 14-10-2018 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.7E-171 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 Gene3D G3DSA:1.10.3930.10 68 148 7.6E-147 T 14-10-2018 BJD94_13215 d92a08b61174eaa78da3f520034c3eca 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.058 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 SUPERFAMILY SSF55781 7 168 4.58E-28 T 14-10-2018 BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 SUPERFAMILY SSF55073 185 332 2.28E-35 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 333 8.7E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 SMART SM00065 25 177 2.4E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 SMART SM00267 169 337 3.0E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 333 3.7E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 Pfam PF13185 GAF domain 26 168 3.2E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 Gene3D G3DSA:3.30.450.40 26 176 4.4E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_08150 ba37ee6f714b22125562e40045fb6801 340 Gene3D G3DSA:3.30.70.270 177 338 4.6E-40 T 14-10-2018 BJD94_09120 0d2ea27fa039d7ff494d6ed19368cad9 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 5.2E-49 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BJD94_09120 0d2ea27fa039d7ff494d6ed19368cad9 203 SMART SM01207 10 185 1.4E-81 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BJD94_09120 0d2ea27fa039d7ff494d6ed19368cad9 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.713 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BJD94_09120 0d2ea27fa039d7ff494d6ed19368cad9 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 194 4.0E-72 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Gene3D G3DSA:3.40.50.300 215 434 3.6E-52 T 14-10-2018 BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 550 41.641 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Pfam PF00270 DEAD/DEAH box helicase 30 195 1.1E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Gene3D G3DSA:3.40.50.300 1 211 2.1E-73 T 14-10-2018 BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 SUPERFAMILY SSF52540 74 361 3.92E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 SMART SM00487 25 223 2.6E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 SMART SM00490 259 340 2.2E-34 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Pfam PF03880 DbpA RNA binding domain 478 545 9.7E-17 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_20920 53d0a2b24cfdb27e653fa0adce518fd0 645 Gene3D G3DSA:3.30.70.330 479 548 1.0E-10 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 2.8E-293 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Pfam PF13932 GidA associated domain 404 616 9.7E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.446 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Gene3D G3DSA:1.10.10.1800 459 550 2.2E-31 T 14-10-2018 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Gene3D G3DSA:3.50.50.60 296 458 6.9E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Gene3D G3DSA:3.50.50.60 1 231 3.4E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 SUPERFAMILY SSF51905 6 261 5.52E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Gene3D G3DSA:1.10.150.570 569 623 4.0E-23 T 14-10-2018 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 Pfam PF01134 Glucose inhibited division protein A 8 399 9.6E-170 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BJD94_11125 467e3d33a049db8e1ac62485f4daf5f0 632 SMART SM01228 546 617 1.1E-43 T 14-10-2018 BJD94_06110 8d2c7caec01582054081c4873cd83341 115 Gene3D G3DSA:1.20.120.160 1 112 2.2E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_06110 8d2c7caec01582054081c4873cd83341 115 Pfam PF01627 Hpt domain 24 102 1.8E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_06110 8d2c7caec01582054081c4873cd83341 115 SUPERFAMILY SSF47226 2 109 5.23E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 SUPERFAMILY SSF54427 28 128 5.26E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 25.566 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 Pfam PF02810 SEC-C motif 4 18 5.5E-6 T 14-10-2018 IPR004027 SEC-C motif BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 14-10-2018 IPR004027 SEC-C motif BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 Gene3D G3DSA:3.10.450.50 1 167 4.4E-52 T 14-10-2018 BJD94_05350 10171406b27f00d8f40fa26c8c1bf047 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 14-10-2018 BJD94_07715 f03feb49640b6f15f27629c442158085 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 3.3E-39 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BJD94_07715 f03feb49640b6f15f27629c442158085 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 6.7E-82 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BJD94_07715 f03feb49640b6f15f27629c442158085 188 Gene3D G3DSA:3.40.50.1000 2 187 3.5E-60 T 14-10-2018 IPR023214 HAD superfamily BJD94_07715 f03feb49640b6f15f27629c442158085 188 PIRSF PIRSF004682 1 186 5.7E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 BJD94_07715 f03feb49640b6f15f27629c442158085 188 SUPERFAMILY SSF56784 4 181 6.31E-48 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_07715 f03feb49640b6f15f27629c442158085 188 Pfam PF13242 HAD-hyrolase-like 107 176 1.1E-12 T 14-10-2018 BJD94_07715 f03feb49640b6f15f27629c442158085 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 155 3.3E-37 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Gene3D G3DSA:3.40.50.300 11 274 1.3E-97 T 14-10-2018 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Gene3D G3DSA:1.10.486.10 383 539 9.6E-133 T 14-10-2018 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.3E-77 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Gene3D G3DSA:1.10.10.160 115 188 1.3E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Gene3D G3DSA:3.40.50.300 282 637 9.6E-133 T 14-10-2018 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 9.5E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD94_10775 09e16562b0482aa2e0b23bd5b3028337 724 SUPERFAMILY SSF52540 8 643 2.58E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 SUPERFAMILY SSF53720 2 484 2.23E-145 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 6.4E-242 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 Gene3D G3DSA:3.40.309.10 250 450 1.1E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 Gene3D G3DSA:3.40.605.10 24 458 1.1E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_15425 ee6ff076046e77b8723dda713c26cb6b 497 Pfam PF00171 Aldehyde dehydrogenase family 13 477 1.2E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_00110 6bc050183bd74d0d95a6f4e70ee9b4b6 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM BJD94_07590 63722358d4added45ac9b574e8817aca 291 SUPERFAMILY SSF56176 201 282 2.64E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_07590 63722358d4added45ac9b574e8817aca 291 Pfam PF00571 CBS domain 67 124 2.3E-7 T 14-10-2018 IPR000644 CBS domain BJD94_07590 63722358d4added45ac9b574e8817aca 291 Pfam PF00571 CBS domain 137 187 2.5E-6 T 14-10-2018 IPR000644 CBS domain BJD94_07590 63722358d4added45ac9b574e8817aca 291 Gene3D G3DSA:3.10.580.10 49 195 1.4E-54 T 14-10-2018 BJD94_07590 63722358d4added45ac9b574e8817aca 291 SUPERFAMILY SSF54631 57 199 1.95E-33 T 14-10-2018 BJD94_07590 63722358d4added45ac9b574e8817aca 291 SMART SM01091 203 281 3.6E-30 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_07590 63722358d4added45ac9b574e8817aca 291 Pfam PF03471 Transporter associated domain 204 279 8.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_07590 63722358d4added45ac9b574e8817aca 291 Gene3D G3DSA:3.30.465.10 196 288 1.9E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD94_07590 63722358d4added45ac9b574e8817aca 291 SMART SM00116 76 125 0.19 T 14-10-2018 IPR000644 CBS domain BJD94_07590 63722358d4added45ac9b574e8817aca 291 SMART SM00116 139 187 0.025 T 14-10-2018 IPR000644 CBS domain BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 Gene3D G3DSA:3.40.50.1000 3 263 1.9E-80 T 14-10-2018 IPR023214 HAD superfamily BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 Gene3D G3DSA:3.30.1240.10 86 191 1.9E-80 T 14-10-2018 BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 8.2E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 4.6E-67 T 14-10-2018 BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.1E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 SUPERFAMILY SSF56784 1 267 5.31E-77 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 BJD94_04500 c2de2c0d019bc55fbf31bf4f2572f463 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 Gene3D G3DSA:3.30.70.20 195 241 2.0E-5 T 14-10-2018 BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 SUPERFAMILY SSF54862 93 285 2.51E-21 T 14-10-2018 BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 Pfam PF12801 4Fe-4S binding domain 82 127 1.4E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 Pfam PF12801 4Fe-4S binding domain 174 211 2.0E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 Pfam PF13187 4Fe-4S dicluster domain 224 270 1.0E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 Gene3D G3DSA:3.30.70.20 242 291 2.4E-5 T 14-10-2018 BJD94_04400 0f2f21aff700f29a3869e907303b5735 294 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 5.3E-117 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 PIRSF PIRSF000381 1 1185 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SUPERFAMILY SSF47644 642 728 4.97E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SUPERFAMILY SSF56507 891 1213 2.75E-134 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 928 1198 2.8E-124 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Pfam PF02310 B12 binding domain 737 830 1.7E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Pfam PF02607 B12 binding domain 648 722 9.6E-26 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SUPERFAMILY SSF52242 733 883 4.19E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Pfam PF00809 Pterin binding enzyme 349 587 1.1E-58 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SUPERFAMILY SSF82282 1 388 1.96E-117 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SUPERFAMILY SSF51717 345 619 2.35E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:3.20.20.20 329 631 5.5E-131 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:3.40.50.280 733 884 9.7E-56 T 14-10-2018 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:3.10.196.10 897 1212 4.3E-148 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:1.10.1240.10 638 726 9.7E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Pfam PF02574 Homocysteine S-methyltransferase 6 313 6.2E-82 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:3.20.20.330 1 328 1.7E-127 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 SMART SM01018 646 729 3.6E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 TIGRFAM TIGR02082 metH: methionine synthase 1 1182 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_13010 22cbf6b12b0d357e82a075e7685ec913 1214 Gene3D G3DSA:1.10.288.10 926 1082 4.3E-148 T 14-10-2018 BJD94_16250 1fb2d22a2c2589c532834113fa597989 311 SUPERFAMILY SSF53067 4 304 4.32E-51 T 14-10-2018 BJD94_16250 1fb2d22a2c2589c532834113fa597989 311 Gene3D G3DSA:3.30.420.40 131 285 2.3E-67 T 14-10-2018 BJD94_16250 1fb2d22a2c2589c532834113fa597989 311 Gene3D G3DSA:3.30.420.40 6 297 2.3E-67 T 14-10-2018 BJD94_16250 1fb2d22a2c2589c532834113fa597989 311 ProSitePatterns PS01125 ROK family signature. 140 167 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_16250 1fb2d22a2c2589c532834113fa597989 311 Pfam PF00480 ROK family 6 299 2.6E-44 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.1E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.1E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.1E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 SUPERFAMILY SSF52402 189 412 5.95E-58 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 7.6E-156 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 14-10-2018 IPR022310 NAD/GMP synthase BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.3E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Gene3D G3DSA:3.40.50.880 6 201 2.2E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.595 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-7 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 14-10-2018 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 5.0E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Gene3D G3DSA:3.40.50.620 202 397 6.7E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.4E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 SUPERFAMILY SSF52317 8 229 1.15E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_08130 66099c4ae2d0d72fd007487a9b43263b 517 Gene3D G3DSA:3.30.300.10 398 517 6.7E-51 T 14-10-2018 BJD94_03975 997afe5478fb2178839929c81e0704ab 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 1.1E-52 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 Pfam PF00085 Thioredoxin 5 106 1.0E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 PIRSF PIRSF000077 2 108 2.2E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.9E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 SUPERFAMILY SSF52833 3 107 5.96E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 BJD94_10730 7a5a6dbc823aa0a99beec5e9f72ab496 108 Gene3D G3DSA:3.40.30.10 1 108 9.8E-35 T 14-10-2018 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 8.6E-38 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 SUPERFAMILY SSF55804 1 150 5.23E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 SUPERFAMILY SSF52794 168 266 8.37E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 169 253 3.6E-24 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 282 624 2.0E-80 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 Pfam PF02378 Phosphotransferase system, EIIC 298 499 3.1E-9 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 Gene3D G3DSA:3.40.50.2300 155 268 7.4E-36 T 14-10-2018 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 1.3E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 261 1.9E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_18715 9152c1450a1e321df8caf6f2625613fd 646 Gene3D G3DSA:3.40.930.10 1 154 2.5E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_12040 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_12040 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD94_12040 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_12040 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_12040 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 SUPERFAMILY SSF52540 3 234 1.6E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 Pfam PF00005 ABC transporter 21 169 1.4E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 SUPERFAMILY SSF52540 353 512 1.38E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 Pfam PF00005 ABC transporter 353 480 3.8E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 SMART SM00382 28 213 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 SMART SM00382 360 522 4.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 Gene3D G3DSA:3.40.50.300 2 271 4.4E-44 T 14-10-2018 BJD94_16730 0d5c26591149e22bdd1d7cfcb32f8429 522 Gene3D G3DSA:3.40.50.300 283 519 1.7E-34 T 14-10-2018 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 SMART SM00342 185 267 3.7E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 2.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 2.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 Pfam PF02311 AraC-like ligand binding domain 18 139 3.6E-19 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 SUPERFAMILY SSF46689 170 218 2.55E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 Pfam PF12833 Helix-turn-helix domain 191 267 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 Gene3D G3DSA:1.10.10.60 169 268 4.6E-29 T 14-10-2018 BJD94_10765 4968c404603e06fc7d37a43475da683d 268 SUPERFAMILY SSF51215 27 137 3.27E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_10765 4968c404603e06fc7d37a43475da683d 268 SUPERFAMILY SSF46689 221 266 2.46E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.252 T 14-10-2018 IPR033747 Class I PurE BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 SMART SM01001 1 152 1.4E-103 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 SUPERFAMILY SSF52255 2 158 1.57E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 PIRSF PIRSF001338 1 160 2.1E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.5E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 Gene3D G3DSA:3.40.50.7700 1 161 4.2E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BJD94_10915 d67c7ca58b9116f94f1ed62dcdd5a9f8 161 Pfam PF00731 AIR carboxylase 2 149 5.9E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Gene3D G3DSA:1.10.287.470 238 294 5.5E-14 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Pfam PF13437 HlyD family secretion protein 302 413 6.8E-18 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Gene3D G3DSA:1.10.287.470 104 177 1.1E-8 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Gene3D G3DSA:2.40.50.100 76 181 1.1E-8 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 34 446 2.6E-94 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Pfam PF13533 Biotin-lipoyl like 78 115 2.4E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Gene3D G3DSA:2.40.50.100 295 333 5.5E-14 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 Gene3D G3DSA:2.40.30.170 334 422 5.5E-14 T 14-10-2018 BJD94_19740 8dd563b89a9907f6a5ff14a1fc329330 446 SUPERFAMILY SSF111369 78 140 1.96E-5 T 14-10-2018 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 SMART SM00859 3 146 3.7E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 Gene3D G3DSA:3.30.360.10 153 312 8.8E-116 T 14-10-2018 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 SUPERFAMILY SSF55347 154 308 6.54E-47 T 14-10-2018 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 1.8E-11 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.19 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 SUPERFAMILY SSF51735 1 170 1.61E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 2.3E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 Gene3D G3DSA:3.40.50.720 6 327 8.8E-116 T 14-10-2018 BJD94_12745 8dd395a397b28a5e211dcb2cabb72f36 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.6E-113 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_01360 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.2E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_01360 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.2E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_01360 a14c9ee10b905c4857706d2477406846 264 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.2E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_01360 a14c9ee10b905c4857706d2477406846 264 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_01360 a14c9ee10b905c4857706d2477406846 264 Gene3D G3DSA:3.40.50.1820 7 262 6.7E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_01360 a14c9ee10b905c4857706d2477406846 264 SUPERFAMILY SSF53474 12 261 7.1E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_05950 2927b972446a4c52c7e3e082f2b84541 255 Gene3D G3DSA:3.30.460.10 6 103 2.9E-8 T 14-10-2018 BJD94_05950 2927b972446a4c52c7e3e082f2b84541 255 SUPERFAMILY SSF81301 35 80 2.22E-7 T 14-10-2018 BJD94_05950 2927b972446a4c52c7e3e082f2b84541 255 Pfam PF01909 Nucleotidyltransferase domain 36 72 3.7E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BJD94_21185 0dff5477bf79c2930024622944d3209f 380 Gene3D G3DSA:3.30.1340.10 291 378 8.5E-27 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_21185 0dff5477bf79c2930024622944d3209f 380 Gene3D G3DSA:3.40.930.10 1 142 1.4E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_21185 0dff5477bf79c2930024622944d3209f 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_21185 0dff5477bf79c2930024622944d3209f 380 SUPERFAMILY SSF55594 294 379 2.75E-23 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_21185 0dff5477bf79c2930024622944d3209f 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 294 373 2.2E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_21185 0dff5477bf79c2930024622944d3209f 380 SUPERFAMILY SSF55804 145 276 1.03E-15 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_21185 0dff5477bf79c2930024622944d3209f 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_21185 0dff5477bf79c2930024622944d3209f 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_21185 0dff5477bf79c2930024622944d3209f 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_21185 0dff5477bf79c2930024622944d3209f 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BJD94_21185 0dff5477bf79c2930024622944d3209f 380 Pfam PF00381 PTS HPr component phosphorylation site 294 373 5.2E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_21185 0dff5477bf79c2930024622944d3209f 380 SUPERFAMILY SSF55804 4 141 3.79E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_21185 0dff5477bf79c2930024622944d3209f 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 3.5E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 Gene3D G3DSA:3.40.50.1860 90 199 6.1E-81 T 14-10-2018 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 Hamap MF_00258 Glutamate racemase [murI]. 1 245 30.915 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 206 1.4E-25 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 65 73 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 Gene3D G3DSA:3.40.50.1860 2 222 6.1E-81 T 14-10-2018 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 SUPERFAMILY SSF53681 102 251 4.41E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 SUPERFAMILY SSF53681 2 99 4.38E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_11790 8d631135ea9f0a68fe3576586107a606 254 TIGRFAM TIGR00067 glut_race: glutamate racemase 1 215 4.2E-68 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 3.6E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 Gene3D G3DSA:1.10.10.1330 128 246 3.5E-24 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 Gene3D G3DSA:1.10.10.60 427 484 3.7E-23 T 14-10-2018 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 PIRSF PIRSF000774 1 487 3.8E-152 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 PRINTS PR00045 Sigma-54 factor signature 386 398 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 PRINTS PR00045 Sigma-54 factor signature 198 215 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 PRINTS PR00045 Sigma-54 factor signature 402 413 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 PRINTS PR00045 Sigma-54 factor signature 460 478 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 3.8E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.2E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BJD94_09550 4e0efe180b21d8b3f040abf0ef250ddb 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 2.4E-156 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD94_16460 f8706b02e79adafe90a377a2f70a03a7 219 Gene3D G3DSA:3.40.50.10420 35 216 1.4E-37 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BJD94_16460 f8706b02e79adafe90a377a2f70a03a7 219 SUPERFAMILY SSF100950 37 216 8.37E-42 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_16460 f8706b02e79adafe90a377a2f70a03a7 219 Pfam PF02589 LUD domain 43 216 6.3E-31 T 14-10-2018 IPR003741 LUD domain BJD94_08470 2378853469390204e64d20396d64cb37 651 Pfam PF01464 Transglycosylase SLT domain 492 604 3.4E-29 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD94_08470 2378853469390204e64d20396d64cb37 651 Gene3D G3DSA:1.25.20.10 36 397 2.1E-98 T 14-10-2018 BJD94_08470 2378853469390204e64d20396d64cb37 651 SUPERFAMILY SSF53955 487 645 2.32E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_08470 2378853469390204e64d20396d64cb37 651 Gene3D G3DSA:1.10.1240.20 413 479 2.5E-22 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 BJD94_08470 2378853469390204e64d20396d64cb37 651 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 508 536 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BJD94_08470 2378853469390204e64d20396d64cb37 651 SUPERFAMILY SSF48435 37 484 1.1E-125 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BJD94_08470 2378853469390204e64d20396d64cb37 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 414 479 1.6E-23 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BJD94_08470 2378853469390204e64d20396d64cb37 651 Gene3D G3DSA:1.10.530.10 480 651 1.3E-49 T 14-10-2018 BJD94_17985 c6c3b5ad0bb4a1ebe07865bc56700387 281 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_17985 c6c3b5ad0bb4a1ebe07865bc56700387 281 Pfam PF00005 ABC transporter 36 191 6.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_17985 c6c3b5ad0bb4a1ebe07865bc56700387 281 Gene3D G3DSA:3.40.50.300 13 280 4.1E-83 T 14-10-2018 BJD94_17985 c6c3b5ad0bb4a1ebe07865bc56700387 281 SUPERFAMILY SSF52540 15 263 2.43E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17985 c6c3b5ad0bb4a1ebe07865bc56700387 281 SMART SM00382 44 241 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06515 b082f1cd9f12c3455824ca3c484b6809 289 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 1.4E-5 T 14-10-2018 IPR010903 Protein of unknown function DUF1517 BJD94_06515 b082f1cd9f12c3455824ca3c484b6809 289 Pfam PF04280 Tim44-like domain 167 288 3.0E-14 T 14-10-2018 IPR007379 Tim44-like domain BJD94_06515 b082f1cd9f12c3455824ca3c484b6809 289 SMART SM00978 158 289 1.1E-35 T 14-10-2018 IPR007379 Tim44-like domain BJD94_06515 b082f1cd9f12c3455824ca3c484b6809 289 Gene3D G3DSA:3.10.450.240 164 288 2.3E-7 T 14-10-2018 BJD94_06515 b082f1cd9f12c3455824ca3c484b6809 289 SUPERFAMILY SSF54427 168 288 1.88E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 SUPERFAMILY SSF52540 5 252 2.32E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 Gene3D G3DSA:3.40.50.300 3 326 1.3E-90 T 14-10-2018 BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 Pfam PF00005 ABC transporter 26 181 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 SMART SM00382 34 231 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_14180 1f34e21a4036735053bbfb7148ef85b2 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 4.5E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_04870 fcc32167d61eba7cfe282bd8ce529655 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 456 1.2E-109 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_04870 fcc32167d61eba7cfe282bd8ce529655 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 17 456 2.5E-56 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_04870 fcc32167d61eba7cfe282bd8ce529655 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 Pfam PF11849 Domain of unknown function (DUF3369) 148 313 1.7E-44 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 Pfam PF00072 Response regulator receiver domain 28 136 7.7E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 SUPERFAMILY SSF109604 324 500 8.17E-39 T 14-10-2018 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 SUPERFAMILY SSF52172 24 156 3.42E-12 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 Gene3D G3DSA:3.40.50.2300 18 167 6.9E-15 T 14-10-2018 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 SMART SM00471 334 471 4.3E-4 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 Pfam PF13487 HD domain 389 452 9.6E-19 T 14-10-2018 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 SMART SM00448 26 148 0.0054 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_15290 992c91c91c25b3f9f67ccbb733f70584 513 Gene3D G3DSA:1.10.3210.10 314 513 4.3E-69 T 14-10-2018 BJD94_20400 0a57eb05881175dfc4bbef0fb1caff76 316 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 151 2.4E-18 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase BJD94_20400 0a57eb05881175dfc4bbef0fb1caff76 316 SUPERFAMILY SSF55961 10 149 3.67E-16 T 14-10-2018 BJD94_20400 0a57eb05881175dfc4bbef0fb1caff76 316 Gene3D G3DSA:3.30.530.20 6 157 2.3E-13 T 14-10-2018 IPR023393 START-like domain superfamily BJD94_20400 0a57eb05881175dfc4bbef0fb1caff76 316 SUPERFAMILY SSF55136 167 303 7.32E-11 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_20400 0a57eb05881175dfc4bbef0fb1caff76 316 Gene3D G3DSA:3.20.80.10 162 312 4.5E-22 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_08340 f0dfa474bbb115e96572497a169fefa7 555 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 322 536 1.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_08340 f0dfa474bbb115e96572497a169fefa7 555 Gene3D G3DSA:1.10.3720.10 286 548 1.1E-29 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_08340 f0dfa474bbb115e96572497a169fefa7 555 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 286 546 1.1E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BJD94_08340 f0dfa474bbb115e96572497a169fefa7 555 SUPERFAMILY SSF161098 284 536 8.11E-36 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 Pfam PF02222 ATP-grasp domain 121 293 4.4E-58 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 SUPERFAMILY SSF52440 2 110 6.91E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 SUPERFAMILY SSF56059 111 313 4.95E-56 T 14-10-2018 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.365 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 Gene3D G3DSA:3.30.1490.20 121 194 8.8E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 1.3E-188 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 SUPERFAMILY SSF51246 317 389 1.21E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 Gene3D G3DSA:3.30.470.20 195 389 2.8E-59 T 14-10-2018 BJD94_02545 5550adcaae6e0d61c7f651e5e087af91 391 Gene3D G3DSA:3.40.50.20 1 120 1.6E-53 T 14-10-2018 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.301 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 8.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 SUPERFAMILY SSF54211 238 493 4.25E-100 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Pfam PF00183 Hsp90 protein 226 633 2.2E-128 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Gene3D G3DSA:3.30.230.80 237 404 3.1E-70 T 14-10-2018 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 SUPERFAMILY SSF55874 10 217 3.54E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 SMART SM00387 32 189 3.6E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 SUPERFAMILY SSF110942 520 632 9.94E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Gene3D G3DSA:1.20.120.790 500 632 8.1E-42 T 14-10-2018 IPR037196 HSP90, C-terminal domain BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Gene3D G3DSA:3.30.565.10 6 220 4.3E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 Gene3D G3DSA:3.40.50.11260 405 494 4.0E-35 T 14-10-2018 BJD94_07115 79ccc5df59fe8325f7c02f5441830634 634 PIRSF PIRSF002583 1 634 1.3E-214 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:1.10.8.10 1 55 9.3E-26 T 14-10-2018 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:3.30.479.20 56 139 2.7E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 76.094 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 55 137 2.83E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 Pfam PF00889 Elongation factor TS 70 260 4.7E-62 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF46934 3 53 2.21E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.7E-104 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 141 277 3.92E-46 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:1.10.286.20 184 223 3.5E-23 T 14-10-2018 BJD94_00240 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.8E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_14300 5e54b0f8cdbd829ae08cafb16bc09115 110 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.7E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82693 41 137 1.57E-16 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.70.1320 138 328 9.7E-245 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.2090.10 182 275 9.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82866 792 1012 1.83E-44 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82714 711 788 6.02E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82693 138 324 1.02E-18 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.70.1430 557 655 9.7E-245 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82866 295 495 7.59E-32 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82714 187 269 1.7E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.2090.10 707 797 9.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 7.8E-164 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.70.1440 656 855 9.7E-245 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 SUPERFAMILY SSF82693 557 651 1.52E-6 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:1.20.1640.10 12 502 9.7E-245 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:1.20.1640.10 503 1005 9.7E-245 T 14-10-2018 BJD94_20415 00cff70b0b062511697ad8860e585d15 1016 Gene3D G3DSA:3.30.70.1430 40 805 9.7E-245 T 14-10-2018 BJD94_06095 37efd42210a16502c59402d506e85395 170 PIRSF PIRSF006443 1 166 1.6E-66 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BJD94_06095 37efd42210a16502c59402d506e85395 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.7E-85 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 BJD94_06095 37efd42210a16502c59402d506e85395 170 SUPERFAMILY SSF53218 7 168 3.93E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_06095 37efd42210a16502c59402d506e85395 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 9.8E-38 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_06095 37efd42210a16502c59402d506e85395 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.3E-34 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_06095 37efd42210a16502c59402d506e85395 170 Gene3D G3DSA:3.40.980.10 2 170 4.3E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_06095 37efd42210a16502c59402d506e85395 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BJD94_06095 37efd42210a16502c59402d506e85395 170 SMART SM00852 14 158 1.2E-27 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 Gene3D G3DSA:3.10.450.350 68 160 7.6E-32 T 14-10-2018 BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 SUPERFAMILY SSF51261 145 392 1.1E-67 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 Pfam PF04225 Opacity-associated protein A LysM-like domain 74 156 6.6E-8 T 14-10-2018 IPR007340 Opacity-associated protein A BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 Gene3D G3DSA:3.10.450.350 161 265 2.3E-33 T 14-10-2018 BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 Gene3D G3DSA:2.70.70.10 266 397 2.0E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_20025 e2305d52fd60dd3f5ef7b2035450a591 429 Pfam PF01551 Peptidase family M23 296 390 1.1E-30 T 14-10-2018 IPR016047 Peptidase M23 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Gene3D G3DSA:3.30.450.20 66 170 6.7E-21 T 14-10-2018 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 67 123 8.1E-6 T 14-10-2018 IPR000014 PAS domain BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 SMART SM00091 64 130 3.9E-8 T 14-10-2018 IPR000014 PAS domain BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Pfam PF00989 PAS fold 68 116 4.1E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 SUPERFAMILY SSF55785 68 158 2.09E-10 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 SMART SM00382 209 352 5.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 SUPERFAMILY SSF52540 189 429 3.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Gene3D G3DSA:1.10.10.60 439 497 1.9E-25 T 14-10-2018 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Gene3D G3DSA:3.30.70.260 1 64 2.4E-16 T 14-10-2018 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 449 497 2.6E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 SUPERFAMILY SSF46689 444 496 5.97E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Gene3D G3DSA:1.10.8.60 361 435 7.6E-16 T 14-10-2018 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 213 226 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Pfam PF00158 Sigma-54 interaction domain 190 354 1.1E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_02040 7bc95e2798da5df35ab179947d502c99 498 Gene3D G3DSA:3.40.50.300 176 359 5.7E-57 T 14-10-2018 BJD94_09350 ec6e39d454ca8af8de94e0c2eabec7f8 185 SUPERFAMILY SSF48317 17 182 4.97E-38 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD94_09350 ec6e39d454ca8af8de94e0c2eabec7f8 185 Pfam PF01569 PAP2 superfamily 70 182 2.5E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_09350 ec6e39d454ca8af8de94e0c2eabec7f8 185 Gene3D G3DSA:1.20.144.10 99 185 8.2E-20 T 14-10-2018 BJD94_09350 ec6e39d454ca8af8de94e0c2eabec7f8 185 SMART SM00014 71 180 7.4E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_07930 47f129ee0d565552c922ddb1705c6382 181 Pfam PF14437 MafB19-like deaminase 12 157 1.8E-31 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BJD94_07930 47f129ee0d565552c922ddb1705c6382 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD94_07930 47f129ee0d565552c922ddb1705c6382 181 Gene3D G3DSA:3.40.140.10 6 171 7.0E-63 T 14-10-2018 BJD94_07930 47f129ee0d565552c922ddb1705c6382 181 SUPERFAMILY SSF53927 9 161 3.85E-55 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_07930 47f129ee0d565552c922ddb1705c6382 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 44.318 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Gene3D G3DSA:3.30.559.10 171 403 2.9E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Gene3D G3DSA:2.40.50.100 1 78 6.2E-22 T 14-10-2018 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Pfam PF00364 Biotin-requiring enzyme 4 76 1.1E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Gene3D G3DSA:4.10.320.10 102 152 1.0E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 401 3.7E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 SUPERFAMILY SSF52777 174 402 4.09E-89 T 14-10-2018 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 SUPERFAMILY SSF47005 106 149 4.05E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 SUPERFAMILY SSF51230 1 95 6.54E-24 T 14-10-2018 IPR011053 Single hybrid motif BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 403 2.0E-185 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD94_06960 1aebb925b7fca5f626f30e3062f1eccc 403 Pfam PF02817 e3 binding domain 113 146 2.4E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 4.4E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.6E-134 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 Gene3D G3DSA:3.10.180.10 3 155 5.1E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 Gene3D G3DSA:3.10.180.10 158 355 1.3E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 PIRSF PIRSF009283 1 355 1.4E-126 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 SUPERFAMILY SSF54593 5 341 1.47E-81 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_04700 1bdb494d28441f2e9beafb9893391844 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 7.1E-58 T 14-10-2018 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Pfam PF00158 Sigma-54 interaction domain 195 361 8.9E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 SUPERFAMILY SSF46689 459 507 8.51E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Gene3D G3DSA:3.40.50.300 180 364 2.7E-64 T 14-10-2018 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 SUPERFAMILY SSF55781 7 166 3.71E-17 T 14-10-2018 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 1.1E-4 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 SUPERFAMILY SSF52540 193 429 9.23E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Gene3D G3DSA:1.10.10.60 456 509 3.2E-8 T 14-10-2018 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 SMART SM00065 21 170 2.0E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Gene3D G3DSA:3.30.450.40 4 174 9.6E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 SMART SM00382 214 358 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_05115 f98b1d90aca955d49bc2b6474164e8a4 509 Gene3D G3DSA:1.10.8.60 365 445 4.9E-16 T 14-10-2018 BJD94_02255 840111bde055479f8d0c810f255215d7 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 415 6.0E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_02255 840111bde055479f8d0c810f255215d7 437 Gene3D G3DSA:3.30.70.270 254 424 2.6E-53 T 14-10-2018 BJD94_02255 840111bde055479f8d0c810f255215d7 437 SMART SM00267 250 422 1.3E-55 T 14-10-2018 IPR000160 GGDEF domain BJD94_02255 840111bde055479f8d0c810f255215d7 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 417 4.5E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_02255 840111bde055479f8d0c810f255215d7 437 SUPERFAMILY SSF55073 266 420 1.1E-46 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 14-10-2018 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF51246 331 444 9.94E-44 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 SMART SM00878 336 441 6.3E-65 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.30.1490.20 131 203 1.8E-156 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Gene3D G3DSA:3.30.470.20 86 433 1.8E-156 T 14-10-2018 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.5E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF52440 1 113 4.6E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.3E-243 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BJD94_12055 f2d61f85d5ba42f4b46079441454725c 448 SUPERFAMILY SSF56059 83 346 1.18E-68 T 14-10-2018 BJD94_04080 bd98d8b6a835ea475484404f649d3f05 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.214 T 14-10-2018 IPR007040 Ribosome modulation factor BJD94_04080 bd98d8b6a835ea475484404f649d3f05 57 Gene3D G3DSA:1.10.10.620 1 57 2.5E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily BJD94_04080 bd98d8b6a835ea475484404f649d3f05 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 2.0E-23 T 14-10-2018 IPR007040 Ribosome modulation factor BJD94_04080 bd98d8b6a835ea475484404f649d3f05 57 Pfam PF04957 Ribosome modulation factor 1 54 8.0E-29 T 14-10-2018 IPR007040 Ribosome modulation factor BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 Gene3D G3DSA:3.30.230.20 1 128 5.0E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.719 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 SUPERFAMILY SSF54211 3 125 1.74E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 Gene3D G3DSA:3.30.1700.10 129 305 9.1E-71 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 SUPERFAMILY SSF54211 134 278 3.49E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 8.6E-144 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD94_08865 c2cb5416e50413a190f6ade4c5c05d78 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.7E-109 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD94_13660 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.8E-102 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_13660 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.1740.10 1 121 3.6E-45 T 14-10-2018 BJD94_13660 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88946 2 107 4.24E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_13660 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.7E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_13660 2555b39087b717e6c11310b006ead891 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_13660 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.10.10 122 192 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13660 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88659 124 185 1.61E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_13660 2555b39087b717e6c11310b006ead891 192 Pfam PF04542 Sigma-70 region 2 25 92 5.9E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_13660 2555b39087b717e6c11310b006ead891 192 Pfam PF08281 Sigma-70, region 4 134 181 3.6E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 Gene3D G3DSA:3.20.20.60 2 419 1.0E-181 T 14-10-2018 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 SUPERFAMILY SSF51621 6 436 1.3E-152 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 PIRSF PIRSF001362 1 437 9.6E-224 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 Pfam PF00463 Isocitrate lyase family 259 436 5.4E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 Pfam PF00463 Isocitrate lyase family 15 257 7.6E-63 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 257 9.5E-114 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD94_08300 2923acbbeb68c1699411063dafc23b19 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 5.3E-90 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD94_16840 fc9a4f5c6c5fbfd27ff74570775e59d9 343 SUPERFAMILY SSF111369 66 216 4.45E-8 T 14-10-2018 BJD94_16840 fc9a4f5c6c5fbfd27ff74570775e59d9 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 257 1.7E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_16840 fc9a4f5c6c5fbfd27ff74570775e59d9 343 Gene3D G3DSA:2.40.50.100 65 216 8.1E-27 T 14-10-2018 BJD94_16840 fc9a4f5c6c5fbfd27ff74570775e59d9 343 Gene3D G3DSA:2.40.30.170 218 262 8.1E-27 T 14-10-2018 BJD94_16840 fc9a4f5c6c5fbfd27ff74570775e59d9 343 Gene3D G3DSA:1.10.287.470 97 186 8.1E-27 T 14-10-2018 BJD94_16600 887e83c92a5d35e8fb0171f1b39008e6 680 SUPERFAMILY SSF63829 413 644 3.99E-6 T 14-10-2018 BJD94_16600 887e83c92a5d35e8fb0171f1b39008e6 680 Pfam PF05787 Bacterial protein of unknown function (DUF839) 76 643 1.8E-151 T 14-10-2018 IPR008557 Protein of unknown function DUF839 BJD94_13270 f1491c751cbc73e985cf708e45949c32 339 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 1 336 2.8E-126 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 BJD94_13270 f1491c751cbc73e985cf708e45949c32 339 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 336 1.7E-67 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Gene3D G3DSA:3.30.565.10 278 439 6.6E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SUPERFAMILY SSF47384 199 280 2.55E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 5.3E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Gene3D G3DSA:1.10.287.130 180 277 3.9E-26 T 14-10-2018 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SMART SM00388 214 279 1.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 9.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 9.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 9.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 9.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SMART SM00448 456 569 2.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Pfam PF00072 Response regulator receiver domain 458 570 3.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SUPERFAMILY SSF55874 268 436 2.62E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SMART SM00387 326 437 2.6E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 SUPERFAMILY SSF52172 456 573 1.18E-35 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04045 79447f611c13a4c4df35f4b53c826ff4 574 Gene3D G3DSA:3.40.50.2300 440 572 1.3E-38 T 14-10-2018 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 Pfam PF00155 Aminotransferase class I and II 44 337 7.8E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.326 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 SUPERFAMILY SSF53383 12 343 3.3E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 Gene3D G3DSA:3.90.1150.10 4 336 1.4E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 3.2E-118 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BJD94_05380 bc86d7e56a4b4d42a991033e90c19a93 346 Gene3D G3DSA:3.40.640.10 49 253 1.4E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 5.9E-186 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 SUPERFAMILY SSF52935 323 469 7.85E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 Gene3D G3DSA:3.20.20.60 4 332 5.5E-147 T 14-10-2018 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-27 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 Gene3D G3DSA:2.40.33.10 71 167 5.5E-147 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 SUPERFAMILY SSF51621 1 339 1.43E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 SUPERFAMILY SSF50800 70 167 4.88E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.7E-154 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_09310 c73dae01b13290e967be2307b1cf6a57 470 Gene3D G3DSA:3.40.1380.20 336 467 3.9E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_01790 4c722c1f3d0d9338929f1939dfaf2b73 321 Gene3D G3DSA:3.40.50.2300 46 292 7.0E-104 T 14-10-2018 BJD94_01790 4c722c1f3d0d9338929f1939dfaf2b73 321 Gene3D G3DSA:3.40.50.2300 143 314 7.0E-104 T 14-10-2018 BJD94_01790 4c722c1f3d0d9338929f1939dfaf2b73 321 SUPERFAMILY SSF53822 42 253 1.04E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_01790 4c722c1f3d0d9338929f1939dfaf2b73 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 6.4E-115 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 7.8E-275 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 8.1E-212 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 Gene3D G3DSA:3.90.228.20 236 526 2.9E-236 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 SUPERFAMILY SSF53795 230 541 3.14E-127 T 14-10-2018 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 Gene3D G3DSA:3.40.449.10 25 235 2.9E-236 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 SUPERFAMILY SSF68923 11 228 1.38E-87 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 Gene3D G3DSA:2.170.8.10 49 351 2.9E-236 T 14-10-2018 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 PIRSF PIRSF006294 4 541 1.1E-227 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BJD94_10500 6da224bda41b63ed454828f93c210ceb 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.977 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BJD94_15395 602e6dcaab5d739b29d414ead9336e92 220 SMART SM00953 72 197 1.0E-22 T 14-10-2018 IPR014914 RES domain BJD94_15395 602e6dcaab5d739b29d414ead9336e92 220 Pfam PF08808 RES domain 59 204 7.7E-27 T 14-10-2018 IPR014914 RES domain BJD94_01615 95b97924fbed486da38985d6c377c20b 91 Pfam PF01381 Helix-turn-helix 1 46 7.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_01615 95b97924fbed486da38985d6c377c20b 91 SUPERFAMILY SSF47413 1 55 3.49E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_01615 95b97924fbed486da38985d6c377c20b 91 SMART SM00530 1 53 5.9E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_01615 95b97924fbed486da38985d6c377c20b 91 Gene3D G3DSA:1.10.260.40 1 61 1.2E-25 T 14-10-2018 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 8.9E-233 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 Pfam PF07690 Major Facilitator Superfamily 34 401 2.7E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 PIRSF PIRSF002808 5 453 7.6E-168 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 Gene3D G3DSA:1.20.1250.20 241 452 4.8E-62 T 14-10-2018 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 SUPERFAMILY SSF103473 18 451 3.4E-87 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 6.1E-150 T 14-10-2018 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BJD94_15025 f6cb9971e934cdaada5ebe1772565cf7 458 Gene3D G3DSA:1.20.1250.20 19 227 8.5E-58 T 14-10-2018 BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 Gene3D G3DSA:3.40.50.300 4 255 7.1E-74 T 14-10-2018 BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 PIRSF PIRSF039085 3 256 3.7E-118 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 SMART SM00382 31 229 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 SUPERFAMILY SSF52540 7 251 9.22E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01230 6687ca2c0b35af4e193c103f086c4d9e 256 Pfam PF00005 ABC transporter 22 181 9.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 Gene3D G3DSA:2.40.50.140 1 84 1.3E-38 T 14-10-2018 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 Pfam PF00366 Ribosomal protein S17 10 77 2.1E-34 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.3E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.3E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.3E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 5.2E-38 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 SUPERFAMILY SSF50249 6 83 8.57E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-38 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09835 c1629b30147e45b0417c55f3d9b61482 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.245 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_14445 17374c953da157fb5a45e1832e080003 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 8.1E-49 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BJD94_14445 17374c953da157fb5a45e1832e080003 258 SMART SM01133 10 244 4.5E-79 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BJD94_14445 17374c953da157fb5a45e1832e080003 258 SUPERFAMILY SSF51569 6 245 2.83E-82 T 14-10-2018 BJD94_14445 17374c953da157fb5a45e1832e080003 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 2.7E-82 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BJD94_14445 17374c953da157fb5a45e1832e080003 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.763 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BJD94_14445 17374c953da157fb5a45e1832e080003 258 Gene3D G3DSA:3.20.20.70 1 256 1.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_14445 17374c953da157fb5a45e1832e080003 258 PIRSF PIRSF001357 5 252 6.6E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Gene3D G3DSA:3.40.50.720 1 278 8.7E-115 T 14-10-2018 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 284 1.3E-22 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Gene3D G3DSA:3.30.1370.170 294 377 1.1E-33 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 8.6E-29 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 SUPERFAMILY SSF52283 1 109 2.08E-23 T 14-10-2018 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Gene3D G3DSA:3.40.50.720 93 258 8.7E-115 T 14-10-2018 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 4.1E-34 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 SUPERFAMILY SSF51735 93 257 3.08E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.069 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 BJD94_00850 c9220f6132e35186d82c0bd32b4e3ca3 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 SUPERFAMILY SSF52518 577 794 6.38E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Gene3D G3DSA:3.40.50.11610 724 930 2.9E-172 T 14-10-2018 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Gene3D G3DSA:1.10.287.1150 85 167 1.2E-30 T 14-10-2018 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Pfam PF00676 Dehydrogenase E1 component 222 517 9.8E-50 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 9.5E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 SMART SM00861 594 787 4.7E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Gene3D G3DSA:3.40.50.12470 557 803 2.9E-172 T 14-10-2018 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.0E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 SUPERFAMILY SSF52518 122 545 8.83E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 Gene3D G3DSA:3.40.50.970 168 534 6.3E-149 T 14-10-2018 BJD94_06965 f80d33fbfcc51fd2fb3e2ac1c52b28d5 941 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD94_05805 cfb6228078cf05a365b903576eaf9ef0 188 Gene3D G3DSA:3.40.30.10 42 188 3.3E-30 T 14-10-2018 BJD94_05805 cfb6228078cf05a365b903576eaf9ef0 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 56 184 1.4E-40 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BJD94_05805 cfb6228078cf05a365b903576eaf9ef0 188 Pfam PF08534 Redoxin 68 175 2.8E-10 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BJD94_05805 cfb6228078cf05a365b903576eaf9ef0 188 SUPERFAMILY SSF52833 58 184 2.25E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 Gene3D G3DSA:3.10.50.10 312 390 5.6E-120 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 SUPERFAMILY SSF51445 20 417 8.32E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 Pfam PF00704 Glycosyl hydrolases family 18 25 416 2.3E-81 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 Gene3D G3DSA:3.20.20.80 23 422 5.6E-120 T 14-10-2018 BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 SUPERFAMILY SSF54556 313 387 4.28E-18 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 SMART SM00636 23 416 1.2E-106 T 14-10-2018 IPR011583 Chitinase II GO:0008061 BJD94_15685 5467d65e2f0cad9dec6ba06700e9ab90 432 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 138 1.2E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.9E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:3.40.50.300 416 597 9.7E-50 T 14-10-2018 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.6E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF52540 37 584 4.51E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 SMART SM00487 9 426 1.8E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF46600 629 672 2.88E-11 T 14-10-2018 IPR036876 UVR domain superfamily BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:3.40.50.300 1 233 9.3E-73 T 14-10-2018 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:4.10.860.10 631 676 4.0E-20 T 14-10-2018 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 1.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 SMART SM00490 461 547 1.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 SUPERFAMILY SSF52540 4 416 1.27E-138 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.161 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 Gene3D G3DSA:3.40.50.300 265 415 1.0E-51 T 14-10-2018 BJD94_06120 6ad4058944443b5dd1ff482a84357960 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BJD94_08055 38b8de89b94b2f30df97c19e69ccda24 580 SUPERFAMILY SSF55729 312 458 9.0E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_08055 38b8de89b94b2f30df97c19e69ccda24 580 Pfam PF01553 Acyltransferase 66 194 5.9E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_08055 38b8de89b94b2f30df97c19e69ccda24 580 SUPERFAMILY SSF69593 42 252 2.09E-12 T 14-10-2018 BJD94_08055 38b8de89b94b2f30df97c19e69ccda24 580 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 1.2E-19 T 14-10-2018 BJD94_08055 38b8de89b94b2f30df97c19e69ccda24 580 SMART SM00563 74 197 1.3E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 Gene3D G3DSA:3.40.50.300 258 498 7.3E-39 T 14-10-2018 BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 Pfam PF00005 ABC transporter 276 430 2.3E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 SUPERFAMILY SSF52540 8 229 9.92E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 SUPERFAMILY SSF52540 245 490 2.91E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 SMART SM00382 284 479 2.1 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 SMART SM00382 34 221 3.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 Gene3D G3DSA:3.40.50.300 1 247 2.1E-54 T 14-10-2018 BJD94_18660 6910e46d890f39fc3726b212490bfe50 502 Pfam PF00005 ABC transporter 25 174 2.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF52440 556 675 3.02E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SMART SM01096 424 547 4.2E-75 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:3.40.50.1380 937 1072 3.5E-33 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:3.30.470.20 665 934 3.9E-125 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF52440 1 127 3.17E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.2E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF56059 673 932 3.54E-104 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:3.30.470.20 119 403 3.7E-129 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:3.40.50.20 1 116 8.1E-51 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Pfam PF02142 MGS-like domain 956 1041 1.5E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:3.40.50.20 554 662 2.6E-49 T 14-10-2018 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SMART SM00851 955 1041 2.0E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Gene3D G3DSA:1.10.1030.10 404 553 2.3E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.389 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF48108 397 554 8.89E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.103 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.2E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD94_08835 74c26b7b281a7ecc61215971128171ce 1077 SUPERFAMILY SSF52335 936 1071 2.62E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 Gene3D G3DSA:1.10.8.630 4 113 2.1E-34 T 14-10-2018 BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.158 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 SUPERFAMILY SSF52540 198 380 6.26E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 Gene3D G3DSA:3.40.50.300 187 380 2.1E-76 T 14-10-2018 BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 SUPERFAMILY SSF52540 462 633 1.66E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 SMART SM00487 195 396 1.0E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 6.7E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 Pfam PF00271 Helicase conserved C-terminal domain 514 589 5.3E-8 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 9.7E-191 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BJD94_12695 2fbf8a648775128a1d36a3f349111008 734 SMART SM00490 493 590 1.3E-12 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_21885 bf1fcd2d52677a4eea8ae509e779b8ee 328 SUPERFAMILY SSF52540 4 171 3.49E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21885 bf1fcd2d52677a4eea8ae509e779b8ee 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 2.3E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BJD94_21885 bf1fcd2d52677a4eea8ae509e779b8ee 328 Gene3D G3DSA:3.40.50.300 2 198 1.1E-44 T 14-10-2018 BJD94_21885 bf1fcd2d52677a4eea8ae509e779b8ee 328 SMART SM00833 241 324 0.0095 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BJD94_14920 bf1fcd2d52677a4eea8ae509e779b8ee 328 SUPERFAMILY SSF52540 4 171 3.49E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14920 bf1fcd2d52677a4eea8ae509e779b8ee 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 2.3E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BJD94_14920 bf1fcd2d52677a4eea8ae509e779b8ee 328 Gene3D G3DSA:3.40.50.300 2 198 1.1E-44 T 14-10-2018 BJD94_14920 bf1fcd2d52677a4eea8ae509e779b8ee 328 SMART SM00833 241 324 0.0095 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BJD94_04095 b8877f86db29c9c2c58aed7bcc1121df 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 57 1.7E-11 T 14-10-2018 IPR008554 Glutaredoxin-like BJD94_04095 b8877f86db29c9c2c58aed7bcc1121df 66 SUPERFAMILY SSF52833 2 60 1.79E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_04095 b8877f86db29c9c2c58aed7bcc1121df 66 Gene3D G3DSA:3.40.30.10 1 66 4.7E-12 T 14-10-2018 BJD94_20695 6005dcbeb8f5a8ad66f0cd994fa2a6e1 126 Pfam PF00031 Cystatin domain 44 108 4.8E-7 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 BJD94_20695 6005dcbeb8f5a8ad66f0cd994fa2a6e1 126 SUPERFAMILY SSF54403 42 115 4.04E-15 T 14-10-2018 BJD94_20695 6005dcbeb8f5a8ad66f0cd994fa2a6e1 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 80 93 - T 14-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site BJD94_20695 6005dcbeb8f5a8ad66f0cd994fa2a6e1 126 Gene3D G3DSA:3.10.450.10 38 118 1.9E-9 T 14-10-2018 BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 PIRSF PIRSF006293 1 223 1.1E-81 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.2E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.3E-82 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 Gene3D G3DSA:3.40.50.620 1 230 2.3E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.311 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD94_04490 2abaf5381c5883b2fa42533a96406710 231 SUPERFAMILY SSF52402 1 211 1.59E-66 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Gene3D G3DSA:1.10.10.1100 824 878 2.1E-12 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 SMART SM00926 5 51 6.1E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Gene3D G3DSA:2.20.25.90 5 50 1.1E-10 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 1.5E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Pfam PF04324 BFD-like [2Fe-2S] binding domain 824 872 7.2E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 50 2.5E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Gene3D G3DSA:3.40.228.10 128 335 4.9E-161 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Gene3D G3DSA:3.40.50.740 63 535 4.9E-161 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 SUPERFAMILY SSF50692 580 706 3.84E-26 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Gene3D G3DSA:2.40.40.20 579 698 1.6E-23 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 SUPERFAMILY SSF53706 5 563 3.4E-172 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 PIRSF PIRSF036643 3 713 8.5E-129 T 14-10-2018 BJD94_14990 4337b64b6ba5ae05e9df9350403c7505 881 Pfam PF00384 Molybdopterin oxidoreductase 64 480 2.4E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 83 98 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 231 243 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 93 98 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 Pfam PF00089 Trypsin 55 279 1.2E-51 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 SUPERFAMILY SSF51055 407 457 1.44E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 SMART SM00495 489 540 7.6E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 SMART SM00495 411 456 4.1E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 Gene3D G3DSA:2.10.10.20 411 454 2.5E-15 T 14-10-2018 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 232 243 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 SMART SM00020 54 281 3.0E-66 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 Gene3D G3DSA:2.60.40.10 296 403 4.5E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 Gene3D G3DSA:2.40.10.10 67 276 4.4E-61 T 14-10-2018 BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 SUPERFAMILY SSF50494 28 286 8.19E-65 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_04515 7a780ccf9f97b0810dd03e385aaddef6 544 Gene3D G3DSA:2.40.10.10 55 275 4.4E-61 T 14-10-2018 BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 Gene3D G3DSA:1.10.3720.10 10 267 8.4E-51 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 SUPERFAMILY SSF161098 9 258 2.09E-43 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 3.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 537 3.8E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 SUPERFAMILY SSF161098 281 535 3.01E-38 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14140 a30c7f71386ffa84c979ce4e0528566d 541 Gene3D G3DSA:1.10.3720.10 284 540 8.5E-34 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_09735 fb8b65a76ed8a925deb7e57b228dec4e 187 Pfam PF04225 Opacity-associated protein A LysM-like domain 103 187 1.1E-37 T 14-10-2018 IPR007340 Opacity-associated protein A BJD94_09735 fb8b65a76ed8a925deb7e57b228dec4e 187 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 63 1.2E-8 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal BJD94_09735 fb8b65a76ed8a925deb7e57b228dec4e 187 Gene3D G3DSA:3.10.450.350 92 186 2.9E-13 T 14-10-2018 BJD94_20475 2e211d3ae5d23f31ce968c4740a485f6 299 SUPERFAMILY SSF103481 62 140 2.48E-10 T 14-10-2018 BJD94_20475 2e211d3ae5d23f31ce968c4740a485f6 299 SUPERFAMILY SSF103481 207 283 9.02E-8 T 14-10-2018 BJD94_20475 2e211d3ae5d23f31ce968c4740a485f6 299 Pfam PF00892 EamA-like transporter family 152 283 1.9E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_20475 2e211d3ae5d23f31ce968c4740a485f6 299 Pfam PF00892 EamA-like transporter family 7 139 9.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_20475 2e211d3ae5d23f31ce968c4740a485f6 299 TIGRFAM TIGR00688 rarD: protein RarD 7 259 3.9E-48 T 14-10-2018 IPR004626 RarD protein GO:0005887 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SUPERFAMILY SSF56037 195 394 3.66E-77 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SMART SM00873 212 385 7.3E-100 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:3.30.56.10 7 179 3.8E-69 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.3E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SUPERFAMILY SSF54991 697 794 6.54E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SMART SM00896 701 794 3.5E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SUPERFAMILY SSF55681 467 689 2.78E-54 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.3E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.0E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:3.50.40.10 197 395 2.9E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SMART SM00874 403 471 1.7E-28 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:3.30.70.380 702 795 7.0E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SUPERFAMILY SSF50249 38 197 2.69E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:3.30.56.10 401 475 2.5E-25 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:2.40.50.140 39 154 3.8E-69 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.285 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 SUPERFAMILY SSF46955 403 475 1.37E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Gene3D G3DSA:3.30.930.10 485 691 5.8E-63 T 14-10-2018 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 Pfam PF03483 B3/4 domain 212 385 1.1E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BJD94_02510 4757ae1ad8a54dcfaf15108764e5802f 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 8.6E-277 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD94_16800 3e04bfff65a50ac40e8eed14a2c97788 217 Gene3D G3DSA:3.40.30.10 1 78 4.6E-13 T 14-10-2018 BJD94_16800 3e04bfff65a50ac40e8eed14a2c97788 217 SUPERFAMILY SSF52833 3 86 1.29E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_16800 3e04bfff65a50ac40e8eed14a2c97788 217 Gene3D G3DSA:1.20.1050.10 84 189 2.2E-38 T 14-10-2018 BJD94_16800 3e04bfff65a50ac40e8eed14a2c97788 217 SUPERFAMILY SSF47616 85 199 4.89E-12 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_16800 3e04bfff65a50ac40e8eed14a2c97788 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 1.9E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_02050 95119868ae1d50f31ad0419a5365a471 195 Pfam PF13023 HD domain 15 169 4.9E-52 T 14-10-2018 IPR006674 HD domain BJD94_02050 95119868ae1d50f31ad0419a5365a471 195 Gene3D G3DSA:1.10.3210.10 1 195 9.3E-55 T 14-10-2018 BJD94_02050 95119868ae1d50f31ad0419a5365a471 195 SUPERFAMILY SSF109604 4 184 8.85E-44 T 14-10-2018 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 3.8E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.087 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 2.2E-303 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Gene3D G3DSA:3.30.70.3280 390 529 1.8E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 1.9E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 SUPERFAMILY SSF54980 393 468 3.6E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.7E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 SUPERFAMILY SSF50447 262 393 3.03E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 8.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Gene3D G3DSA:3.40.50.300 72 379 4.5E-116 T 14-10-2018 BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 SUPERFAMILY SSF52540 10 277 1.83E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_14430 ae2bcdb6120f50f108e1c4a8389e8c78 529 Gene3D G3DSA:3.40.50.300 110 275 4.5E-116 T 14-10-2018 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 Gene3D G3DSA:3.40.50.1980 178 291 2.6E-36 T 14-10-2018 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 SUPERFAMILY SSF53807 21 289 3.24E-73 T 14-10-2018 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00691 Adhesin B signature 121 140 5.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00691 Adhesin B signature 63 82 5.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00691 Adhesin B signature 44 62 5.3E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 Gene3D G3DSA:3.40.50.1980 21 177 1.4E-44 T 14-10-2018 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00690 Adhesin family signature 177 198 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00690 Adhesin family signature 50 63 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00690 Adhesin family signature 230 248 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 PRINTS PR00690 Adhesin family signature 63 80 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BJD94_06935 ad1c8e57c4e51d03daf760f9782a05a9 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 277 1.2E-54 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.168 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PIRSF PIRSF002162 1 177 1.1E-42 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 1 82 4.5E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 1 82 4.68E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 83 177 2.88E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09805 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 11 82 8.1E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 Gene3D G3DSA:3.40.190.10 93 290 3.6E-72 T 14-10-2018 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 Gene3D G3DSA:1.10.10.10 1 92 3.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 SUPERFAMILY SSF46785 1 112 5.9E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 SUPERFAMILY SSF53850 89 296 3.94E-40 T 14-10-2018 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 Gene3D G3DSA:3.40.190.10 163 267 3.6E-72 T 14-10-2018 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_01765 e2d87ee8396b2d1502ad00909aa5d176 303 Pfam PF03466 LysR substrate binding domain 89 293 3.5E-42 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Pfam PF00563 EAL domain 554 789 4.0E-66 T 14-10-2018 IPR001633 EAL domain BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 SUPERFAMILY SSF55073 382 540 8.63E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Pfam PF08269 Cache domain 13 305 2.6E-88 T 14-10-2018 IPR004010 Double Cache domain 2 BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Gene3D G3DSA:3.20.20.450 549 806 2.1E-86 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 SUPERFAMILY SSF141868 553 799 1.7E-81 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Gene3D G3DSA:3.30.450.20 49 202 9.9E-37 T 14-10-2018 BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 SMART SM00267 366 538 4.0E-62 T 14-10-2018 IPR000160 GGDEF domain BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 6.7E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 SMART SM00052 548 794 7.0E-98 T 14-10-2018 IPR001633 EAL domain BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Gene3D G3DSA:3.30.450.20 203 310 3.3E-19 T 14-10-2018 BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Gene3D G3DSA:3.30.70.270 362 541 8.7E-52 T 14-10-2018 BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 SMART SM01049 50 143 1.1E-23 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_01735 9e1fbe597aaea554fe207063010863e2 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 533 6.7E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 Gene3D G3DSA:1.10.357.10 1 205 1.0E-92 T 14-10-2018 BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF46689 8 83 8.98E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF48498 90 197 2.06E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_14020 9eb4305d4854e36bf2bc66b33d2d9c57 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_16490 cedd43537cc409a668a0c2048864d889 191 Pfam PF13505 Outer membrane protein beta-barrel domain 7 191 2.4E-23 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_16490 cedd43537cc409a668a0c2048864d889 191 Gene3D G3DSA:2.40.160.20 21 191 4.4E-24 T 14-10-2018 BJD94_16490 cedd43537cc409a668a0c2048864d889 191 SUPERFAMILY SSF56925 23 191 2.41E-26 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 Pfam PF12852 Cupin 3 165 2.4E-34 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 SUPERFAMILY SSF46689 180 231 3.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 Gene3D G3DSA:1.10.10.60 175 282 9.4E-28 T 14-10-2018 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 SUPERFAMILY SSF46689 233 282 8.06E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 SUPERFAMILY SSF51215 30 163 1.19E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 SMART SM00342 197 280 3.5E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 Pfam PF12833 Helix-turn-helix domain 204 281 2.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17650 80200c42c6ad886bc7bbdb4a591e683e 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_16050 cc8e2c1bfab67a725ddb112a9651c140 146 SUPERFAMILY SSF55785 10 128 6.81E-12 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_16050 cc8e2c1bfab67a725ddb112a9651c140 146 Pfam PF00989 PAS fold 16 134 1.9E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_16050 cc8e2c1bfab67a725ddb112a9651c140 146 Gene3D G3DSA:3.30.450.20 6 140 3.8E-32 T 14-10-2018 BJD94_09420 198dbac30e58e322365603183e9078b9 162 Pfam PF00186 Dihydrofolate reductase 3 159 1.2E-59 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BJD94_09420 198dbac30e58e322365603183e9078b9 162 Gene3D G3DSA:3.40.430.10 1 162 6.1E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_09420 198dbac30e58e322365603183e9078b9 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.0E-14 T 14-10-2018 BJD94_09420 198dbac30e58e322365603183e9078b9 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.0E-14 T 14-10-2018 BJD94_09420 198dbac30e58e322365603183e9078b9 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.0E-14 T 14-10-2018 BJD94_09420 198dbac30e58e322365603183e9078b9 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.0E-14 T 14-10-2018 BJD94_09420 198dbac30e58e322365603183e9078b9 162 PIRSF PIRSF000194 1 162 3.3E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BJD94_09420 198dbac30e58e322365603183e9078b9 162 SUPERFAMILY SSF53597 1 160 1.43E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 8.4E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Gene3D G3DSA:3.40.120.10 176 363 2.2E-62 T 14-10-2018 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Gene3D G3DSA:3.40.120.10 4 155 7.8E-49 T 14-10-2018 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 SUPERFAMILY SSF53738 4 182 1.14E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 3.0E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 3.7E-203 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 SUPERFAMILY SSF53738 157 257 1.02E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Gene3D G3DSA:3.40.120.10 258 340 2.2E-62 T 14-10-2018 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.0E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 SUPERFAMILY SSF53738 259 366 4.32E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Gene3D G3DSA:3.30.310.50 371 446 1.2E-24 T 14-10-2018 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 SUPERFAMILY SSF55957 359 445 6.54E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14295 45273f49bd61a34131350d36aeac9016 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.847 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 1 253 1.3E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 1 251 2.47E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.4E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 213 401 3.0E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 258 401 7.6E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.5E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD94_00845 e20f78db70c78b95fd7b6b2aa9fead89 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.3E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 2.7E-20 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.8E-30 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.986 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_00585 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 8.7E-64 T 14-10-2018 IPR017926 Glutamine amidotransferase BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 Pfam PF06418 CTP synthase N-terminus 5 265 7.1E-125 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 Gene3D G3DSA:3.40.50.880 286 543 4.6E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.7E-262 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 SUPERFAMILY SSF52317 289 538 6.66E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 SUPERFAMILY SSF52540 3 269 2.44E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.383 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD94_13750 bae0254953d7d72c8e47a6695df7fec5 545 Gene3D G3DSA:3.40.50.300 1 285 2.6E-133 T 14-10-2018 BJD94_18065 f16bbc18773d4ff2f053ae6350cc89aa 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.207 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_18065 f16bbc18773d4ff2f053ae6350cc89aa 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 7.4E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_18065 f16bbc18773d4ff2f053ae6350cc89aa 408 Pfam PF03616 Sodium/glutamate symporter 6 376 1.4E-154 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:1.20.1330.10 44 327 8.0E-75 T 14-10-2018 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:1.10.8.410 328 376 2.1E-20 T 14-10-2018 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:3.30.70.2120 174 275 8.0E-75 T 14-10-2018 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07240 0aaf6f243398935b6e82c680f4246cd2 377 SUPERFAMILY SSF64518 1 376 2.75E-97 T 14-10-2018 BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 Pfam PF00501 AMP-binding enzyme 103 532 4.8E-46 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 SUPERFAMILY SSF56801 33 650 3.79E-120 T 14-10-2018 BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 Gene3D G3DSA:3.40.50.12780 79 528 1.4E-55 T 14-10-2018 BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 Gene3D G3DSA:3.30.300.30 532 657 1.4E-14 T 14-10-2018 BJD94_15250 baae42a75f0c7f6ecdbc6a9abf885e37 658 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 650 1.4E-240 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 34 466 63.477 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 35 464 2.9E-186 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 SUPERFAMILY SSF102114 145 396 3.53E-52 T 14-10-2018 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Pfam PF04055 Radical SAM superfamily 172 349 1.4E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Pfam PF00919 Uncharacterized protein family UPF0004 35 119 7.0E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Gene3D G3DSA:3.80.30.20 164 405 5.0E-73 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 35 464 1.7E-108 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Gene3D G3DSA:2.40.50.140 406 469 5.1E-23 T 14-10-2018 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 SMART SM00729 166 391 1.2E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 170 190 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BJD94_18340 1d99ad6dbbfc6af39fc48c895daeffee 469 Gene3D G3DSA:3.40.50.12160 34 162 6.2E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 7.1E-46 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 9.0E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF51735 15 190 3.38E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF48179 191 343 6.89E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:3.40.50.720 4 199 2.4E-51 T 14-10-2018 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.003 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 PIRSF PIRSF000114 9 344 2.5E-94 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD94_12270 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:1.10.1040.10 201 345 1.5E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_15185 0428fcc91ae33c797fa72e1ad0b8afdd 440 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 438 3.2E-132 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD94_15185 0428fcc91ae33c797fa72e1ad0b8afdd 440 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 440 2.2E-140 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 Gene3D G3DSA:1.10.287.950 151 477 3.2E-65 T 14-10-2018 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 SMART SM00283 214 475 1.5E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 SUPERFAMILY SSF58104 166 476 3.92E-66 T 14-10-2018 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 1.8E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 235 264 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 341 370 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_21290 eacea0d69dc4e1c1acc9fec13cec4ac2 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 339 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.357 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.5E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08905 1c4a2cb50a3ef21756069db0ab3d9fd9 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.3E-157 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_04345 35b225e27988da3e0ac7fcf4d1685b02 469 SUPERFAMILY SSF56954 2 446 6.54E-67 T 14-10-2018 BJD94_04345 35b225e27988da3e0ac7fcf4d1685b02 469 Gene3D G3DSA:1.20.1600.10 22 458 2.7E-61 T 14-10-2018 BJD94_04345 35b225e27988da3e0ac7fcf4d1685b02 469 Pfam PF02321 Outer membrane efflux protein 266 446 1.9E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_04345 35b225e27988da3e0ac7fcf4d1685b02 469 Pfam PF02321 Outer membrane efflux protein 28 243 7.3E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 Gene3D G3DSA:3.30.70.270 236 414 2.6E-58 T 14-10-2018 BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 Pfam PF00563 EAL domain 420 655 2.4E-74 T 14-10-2018 IPR001633 EAL domain BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 SUPERFAMILY SSF141868 418 668 2.62E-89 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 SMART SM00267 231 402 1.8E-62 T 14-10-2018 IPR000160 GGDEF domain BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 2.5E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 SUPERFAMILY SSF55073 247 404 9.42E-48 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 5.2E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 Gene3D G3DSA:3.20.20.450 415 681 1.6E-96 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_14420 25afba60f23f9e4d5f5d194cdcd055bd 687 SMART SM00052 412 660 7.2E-107 T 14-10-2018 IPR001633 EAL domain BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 Pfam PF08323 Starch synthase catalytic domain 23 254 1.0E-64 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 Gene3D G3DSA:3.40.50.2000 23 496 5.2E-151 T 14-10-2018 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 Gene3D G3DSA:3.40.50.2000 271 482 5.2E-151 T 14-10-2018 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 SUPERFAMILY SSF53756 18 500 1.78E-107 T 14-10-2018 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 Pfam PF00534 Glycosyl transferases group 1 314 461 2.4E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 Hamap MF_00484 Glycogen synthase [glgA]. 21 498 38.648 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD94_01355 456afefdd7de58eae78a323b30f157b9 500 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 22 497 4.4E-161 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 Gene3D G3DSA:3.40.50.1580 2 274 1.5E-101 T 14-10-2018 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 SUPERFAMILY SSF53167 4 272 3.89E-81 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 PIRSF PIRSF000477 2 273 7.4E-103 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 Pfam PF01048 Phosphorylase superfamily 23 271 1.5E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 271 5.1E-97 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 23 271 3.7E-126 T 14-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BJD94_18855 a27bd889bbb0b40503e7ea64815facba 276 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Gene3D G3DSA:2.40.30.10 5 109 1.2E-23 T 14-10-2018 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 SUPERFAMILY SSF63380 4 110 3.23E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Pfam PF00970 Oxidoreductase FAD-binding domain 18 109 3.3E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 3.2E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 SUPERFAMILY SSF54292 238 346 1.7E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Gene3D G3DSA:3.40.50.80 118 255 3.7E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Gene3D G3DSA:3.10.20.30 260 347 9.4E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 SUPERFAMILY SSF52343 119 249 1.96E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_05125 47a93fc37df2447a5a0fe0ddaa768e61 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 1.4E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 72 146 2.5E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 Gene3D G3DSA:1.10.760.10 72 149 8.6E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 PRINTS PR00607 Class IE cytochrome C signature 136 147 2.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 PRINTS PR00607 Class IE cytochrome C signature 93 103 2.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 PRINTS PR00607 Class IE cytochrome C signature 82 93 2.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 PRINTS PR00607 Class IE cytochrome C signature 121 133 2.1E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 BJD94_11350 c4d31844abd437ea92f1433a944f5675 150 SUPERFAMILY SSF46626 73 147 1.74E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.3E-50 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.8E-144 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.815 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 2.2E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 SUPERFAMILY SSF69075 315 416 8.89E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Gene3D G3DSA:3.30.460.30 1 156 2.3E-58 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Gene3D G3DSA:3.40.50.720 159 311 1.0E-44 T 14-10-2018 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 SUPERFAMILY SSF69742 1 156 1.96E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.1E-52 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 SUPERFAMILY SSF51735 160 313 1.22E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_07465 c99d3692dd8f3b2cc42470126c56019d 419 PIRSF PIRSF000445 1 419 9.8E-158 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD94_21465 c08d82943542d392b5c1e5b7bd678acb 200 SUPERFAMILY SSF52266 22 199 3.51E-50 T 14-10-2018 BJD94_21465 c08d82943542d392b5c1e5b7bd678acb 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 BJD94_21465 c08d82943542d392b5c1e5b7bd678acb 200 Gene3D G3DSA:3.40.50.1110 20 200 1.0E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily BJD94_21465 c08d82943542d392b5c1e5b7bd678acb 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 183 3.4E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD94_08450 3ed59c0ba6cb6cb0adb461c566a78bea 107 Gene3D G3DSA:3.30.160.100 1 105 5.1E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD94_08450 3ed59c0ba6cb6cb0adb461c566a78bea 107 SUPERFAMILY SSF69754 1 102 1.09E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD94_08450 3ed59c0ba6cb6cb0adb461c566a78bea 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 7.7E-31 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD94_08450 3ed59c0ba6cb6cb0adb461c566a78bea 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.7E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD94_10835 b1cc0fa7e2d0470703f10b54f5f12d08 278 SUPERFAMILY SSF69572 3 264 1.44E-69 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD94_10835 b1cc0fa7e2d0470703f10b54f5f12d08 278 Pfam PF00899 ThiF family 10 261 5.9E-54 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD94_10835 b1cc0fa7e2d0470703f10b54f5f12d08 278 Gene3D G3DSA:3.40.50.720 2 272 3.7E-81 T 14-10-2018 BJD94_09440 c5a516981688324e960ebf8e25793526 85 SUPERFAMILY SSF110324 2 80 1.43E-34 T 14-10-2018 BJD94_09440 c5a516981688324e960ebf8e25793526 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09440 c5a516981688324e960ebf8e25793526 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.9E-44 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.447 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09440 c5a516981688324e960ebf8e25793526 85 Gene3D G3DSA:2.40.50.100 21 85 2.5E-31 T 14-10-2018 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.2E-136 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 SMART SM00864 13 205 1.6E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 Gene3D G3DSA:3.40.50.1440 5 220 1.5E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 Gene3D G3DSA:3.30.1330.20 221 327 1.3E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 SUPERFAMILY SSF52490 13 208 8.11E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.2E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 391 38.123 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.4E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 SUPERFAMILY SSF55307 204 320 9.61E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BJD94_08870 d7797734adfd83226ae1f106e5a734ef 404 SMART SM00865 207 325 1.4E-55 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 SUPERFAMILY SSF101386 123 210 1.44E-25 T 14-10-2018 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 8.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.521 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 6.0E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.654 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 2.8E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 SUPERFAMILY SSF141734 14 124 8.24E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Gene3D G3DSA:3.10.20.400 4 102 6.3E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BJD94_05355 f9f26b2ccf80bb68cfc4c8ca7c3c3d4d 211 Gene3D G3DSA:1.10.287.1080 120 211 6.1E-30 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.2E-35 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 Gene3D G3DSA:3.40.50.880 2 191 4.8E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.7E-6 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 6.7E-6 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 5.5E-55 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 4.3E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 SUPERFAMILY SSF52317 3 191 2.04E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 8.2E-14 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 8.2E-14 T 14-10-2018 BJD94_05995 7ccb68241409eb9c283bc2dc3641806d 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.2E-14 T 14-10-2018 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 Pfam PF00696 Amino acid kinase family 14 243 5.2E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 376 1.5E-148 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 Gene3D G3DSA:3.40.1160.10 6 274 2.2E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 36.128 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PIRSF PIRSF000729 9 378 2.6E-138 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 Gene3D G3DSA:2.30.130.10 275 377 1.2E-33 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 SMART SM00359 286 369 1.1E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 2.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 2.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 2.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 2.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 2.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 SUPERFAMILY SSF88697 286 376 3.37E-25 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 Pfam PF01472 PUA domain 286 360 3.1E-25 T 14-10-2018 IPR002478 PUA domain GO:0003723 BJD94_07870 8d9a36fd47ffc1ccd9c383330e8d0b1d 379 SUPERFAMILY SSF53633 14 265 1.83E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_18980 e305cecfc956b4584e68cb7a6d0d28e4 240 SUPERFAMILY SSF55469 1 239 3.8E-73 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_18980 e305cecfc956b4584e68cb7a6d0d28e4 240 PIRSF PIRSF005426 1 240 2.1E-83 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 BJD94_18980 e305cecfc956b4584e68cb7a6d0d28e4 240 Pfam PF00881 Nitroreductase family 9 159 5.9E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD94_18980 e305cecfc956b4584e68cb7a6d0d28e4 240 Gene3D G3DSA:3.40.109.10 1 240 5.0E-74 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_17930 d0830de4fc16b09ded1378e20fd069b7 153 Gene3D G3DSA:2.30.30.40 8 132 3.6E-35 T 14-10-2018 BJD94_17930 d0830de4fc16b09ded1378e20fd069b7 153 SMART SM00260 1 138 4.2E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_17930 d0830de4fc16b09ded1378e20fd069b7 153 SUPERFAMILY SSF50341 2 141 8.11E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_17930 d0830de4fc16b09ded1378e20fd069b7 153 Pfam PF01584 CheW-like domain 5 140 8.3E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_17930 d0830de4fc16b09ded1378e20fd069b7 153 Gene3D G3DSA:2.40.50.180 24 133 3.6E-35 T 14-10-2018 BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 Gene3D G3DSA:3.30.70.980 83 235 3.6E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 Gene3D G3DSA:1.10.10.200 17 78 1.1E-16 T 14-10-2018 IPR017856 Integrase-like, N-terminal BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.93 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 Pfam PF01709 Transcriptional regulator 5 236 2.0E-73 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 Gene3D G3DSA:3.30.70.980 131 202 3.6E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_18015 2ca90e5da4db8d4b44b7104944d393c1 238 SUPERFAMILY SSF75625 1 237 9.16E-77 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 Gene3D G3DSA:3.30.70.580 1 104 2.2E-40 T 14-10-2018 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 6.3E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 PIRSF PIRSF001430 1 256 1.3E-76 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.667 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 SUPERFAMILY SSF55120 1 255 1.27E-93 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 Gene3D G3DSA:3.30.70.660 105 242 1.4E-47 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 2.6E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00865 cd04c6bd25e69344643dce59c12d4eed 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 4.5E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 Gene3D G3DSA:3.30.70.20 414 480 3.3E-11 T 14-10-2018 BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 Gene3D G3DSA:3.30.70.20 160 254 1.3E-12 T 14-10-2018 BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 Pfam PF13187 4Fe-4S dicluster domain 419 464 1.1E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 SUPERFAMILY SSF54862 149 510 1.06E-36 T 14-10-2018 BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 Pfam PF12838 4Fe-4S dicluster domain 184 230 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_03880 b3e1ea127729eaa4272b856d332f4e0a 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 450 461 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Gene3D G3DSA:1.20.1270.10 523 602 5.1E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 SUPERFAMILY SSF100934 534 607 3.88E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 SUPERFAMILY SSF100920 383 539 2.35E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Pfam PF00012 Hsp70 protein 4 601 1.5E-263 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.271 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.4E-285 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 SUPERFAMILY SSF53067 186 381 1.1E-65 T 14-10-2018 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 4.8E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Gene3D G3DSA:3.30.420.40 5 378 2.0E-167 T 14-10-2018 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 SUPERFAMILY SSF53067 1 182 1.84E-66 T 14-10-2018 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Gene3D G3DSA:2.60.34.10 382 522 7.6E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Gene3D G3DSA:3.90.640.10 228 315 2.0E-167 T 14-10-2018 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 Gene3D G3DSA:3.30.420.40 179 365 2.0E-167 T 14-10-2018 BJD94_07985 135d4cc0f3384d5c67ba37faee50d259 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_21495 6039955388159fcbe2df69717c6c758e 252 Gene3D G3DSA:3.20.20.370 9 252 2.4E-100 T 14-10-2018 BJD94_21495 6039955388159fcbe2df69717c6c758e 252 Pfam PF03746 LamB/YcsF family 11 249 7.0E-97 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BJD94_21495 6039955388159fcbe2df69717c6c758e 252 SUPERFAMILY SSF88713 10 250 1.63E-92 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD94_21495 6039955388159fcbe2df69717c6c758e 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 9 252 41.272 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SMART SM00278 545 564 5.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SMART SM00278 447 466 100.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SMART SM00278 481 500 6.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:3.30.470.90 70 318 5.4E-101 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:2.20.70.80 392 432 7.4E-19 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 7.3E-24 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:1.10.287.610 3 69 2.9E-26 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SUPERFAMILY SSF56091 5 317 9.92E-123 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:2.40.50.140 319 391 8.1E-35 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.1E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 4.6E-263 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SUPERFAMILY SSF50249 319 401 2.06E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:3.40.50.10190 586 669 4.6E-25 T 14-10-2018 IPR036420 BRCT domain superfamily BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 7.3E-132 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SUPERFAMILY SSF52113 596 668 4.86E-17 T 14-10-2018 IPR036420 BRCT domain superfamily BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SUPERFAMILY SSF47781 404 584 5.56E-61 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:1.10.150.20 433 506 1.1E-28 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.1E-11 T 14-10-2018 IPR001357 BRCT domain BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 1.1E-5 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SMART SM00532 4 449 1.4E-273 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 SMART SM00292 595 669 4.3E-9 T 14-10-2018 IPR001357 BRCT domain BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.706 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Gene3D G3DSA:1.10.150.20 507 585 1.8E-29 T 14-10-2018 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 4.5E-36 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BJD94_07200 38d6a747a27dce53bfd8236894c500d2 669 PIRSF PIRSF001604 1 669 1.3E-253 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 595 1.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Gene3D G3DSA:3.30.450.20 64 171 7.4E-50 T 14-10-2018 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 SUPERFAMILY SSF103190 83 177 9.02E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 SMART SM00304 295 352 2.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 SMART SM00304 387 454 70.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Gene3D G3DSA:1.10.287.950 301 629 9.1E-70 T 14-10-2018 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 SUPERFAMILY SSF58104 320 629 1.57E-76 T 14-10-2018 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Gene3D G3DSA:3.30.450.20 53 267 7.4E-50 T 14-10-2018 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Pfam PF02743 Cache domain 39 260 4.6E-25 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 Pfam PF00672 HAMP domain 304 348 1.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15005 868527571ddd7e7c63eeef4be553c1bd 629 SMART SM00283 367 628 8.0E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 Gene3D G3DSA:3.30.420.40 96 190 2.3E-83 T 14-10-2018 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 SUPERFAMILY SSF53067 111 219 1.42E-28 T 14-10-2018 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 SUPERFAMILY SSF53067 4 106 4.75E-31 T 14-10-2018 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.3E-68 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 Gene3D G3DSA:3.30.420.40 5 201 2.3E-83 T 14-10-2018 BJD94_06880 8caeb7d0b72ab14569e975b3321a6a4f 233 Pfam PF00814 Glycoprotease family 30 227 1.4E-31 T 14-10-2018 IPR000905 Gcp-like domain BJD94_18435 98d8eaade5011ec015364a2c43c901f3 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 211 7.3E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_18435 98d8eaade5011ec015364a2c43c901f3 268 Gene3D G3DSA:3.40.190.10 105 199 3.9E-12 T 14-10-2018 BJD94_18435 98d8eaade5011ec015364a2c43c901f3 268 SUPERFAMILY SSF53850 22 216 3.43E-21 T 14-10-2018 BJD94_18435 98d8eaade5011ec015364a2c43c901f3 268 Gene3D G3DSA:3.40.190.10 42 201 3.9E-12 T 14-10-2018 BJD94_05840 6e9d5d2af930e704b5988989d3c4f030 213 Gene3D G3DSA:1.25.40.10 121 208 8.1E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05840 6e9d5d2af930e704b5988989d3c4f030 213 SUPERFAMILY SSF48452 75 188 2.63E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05840 6e9d5d2af930e704b5988989d3c4f030 213 Gene3D G3DSA:1.25.40.10 60 120 5.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 11 380 2.2E-92 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 Gene3D G3DSA:3.20.20.140 58 354 9.1E-125 T 14-10-2018 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 SUPERFAMILY SSF51338 9 385 1.99E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 PIRSF PIRSF038994 5 387 3.9E-122 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 Pfam PF01979 Amidohydrolase family 55 383 1.1E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 SUPERFAMILY SSF51556 58 354 7.38E-98 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_17490 9e887c91a1053f7ed7287c299817f559 397 Gene3D G3DSA:2.30.40.10 13 381 9.1E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_11420 f03a9f64bc75e345f5e7ffcf65e74cba 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 189 1.9E-61 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BJD94_11420 f03a9f64bc75e345f5e7ffcf65e74cba 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 189 4.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_11420 f03a9f64bc75e345f5e7ffcf65e74cba 190 Gene3D G3DSA:1.10.10.10 104 190 9.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11420 f03a9f64bc75e345f5e7ffcf65e74cba 190 Pfam PF07638 ECF sigma factor 6 189 8.2E-32 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BJD94_11420 f03a9f64bc75e345f5e7ffcf65e74cba 190 SUPERFAMILY SSF88659 123 189 4.49E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_15580 f053cc3325ea0ce3c98d791297080bb5 208 Pfam PF13462 Thioredoxin 48 201 2.4E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold BJD94_15580 f053cc3325ea0ce3c98d791297080bb5 208 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_15580 f053cc3325ea0ce3c98d791297080bb5 208 SUPERFAMILY SSF52833 26 206 2.7E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15580 f053cc3325ea0ce3c98d791297080bb5 208 Gene3D G3DSA:3.40.30.10 23 207 3.0E-41 T 14-10-2018 BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 Pfam PF00593 TonB dependent receptor 230 710 1.4E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 711 3.7E-128 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 Gene3D G3DSA:2.40.170.20 166 711 3.5E-80 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 1.8E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 694 711 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 SUPERFAMILY SSF56935 22 711 1.49E-110 T 14-10-2018 BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 711 6.6E-126 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BJD94_19625 6e38ea90954d40347b54f5bd4a44167d 711 Gene3D G3DSA:2.170.130.10 28 155 2.4E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_16365 0507767d0ccb0b5649510ceef2ac1cc4 221 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 5.2E-39 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related BJD94_16365 0507767d0ccb0b5649510ceef2ac1cc4 221 SUPERFAMILY SSF50475 2 184 9.3E-51 T 14-10-2018 BJD94_16365 0507767d0ccb0b5649510ceef2ac1cc4 221 Gene3D G3DSA:2.30.110.10 2 219 7.0E-58 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 SMART SM00934 5 226 5.0E-100 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.1E-57 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.599 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.5E-51 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 SUPERFAMILY SSF51366 1 228 2.86E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_05585 84033887d14befc65cb3c370b5a5c431 232 Gene3D G3DSA:3.20.20.70 2 232 2.0E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_03780 f93291485ddfdb3125165d81598e3938 141 Pfam PF00877 NlpC/P60 family 34 138 1.1E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BJD94_03780 f93291485ddfdb3125165d81598e3938 141 SUPERFAMILY SSF54001 24 139 2.06E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD94_03780 f93291485ddfdb3125165d81598e3938 141 Gene3D G3DSA:3.90.1720.10 19 141 4.0E-38 T 14-10-2018 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Gene3D G3DSA:3.40.50.2300 3 139 6.9E-33 T 14-10-2018 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Gene3D G3DSA:1.10.8.60 291 359 3.2E-17 T 14-10-2018 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Gene3D G3DSA:3.40.50.300 141 289 2.0E-24 T 14-10-2018 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Pfam PF14532 Sigma-54 interaction domain 143 289 5.4E-17 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Pfam PF00072 Response regulator receiver domain 8 117 5.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Gene3D G3DSA:1.10.10.60 360 418 1.8E-11 T 14-10-2018 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 SUPERFAMILY SSF52172 4 187 5.69E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 412 5.4E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 SMART SM00448 6 117 1.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 SUPERFAMILY SSF46689 364 414 1.18E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 331 340 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_21235 0163d88d8b716c700c0f86e4f9b5ccaf 422 SUPERFAMILY SSF52540 142 347 7.93E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18025 ae06b3759cb6bd2a0319ef364a09df7d 231 Pfam PF00005 ABC transporter 21 169 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_18025 ae06b3759cb6bd2a0319ef364a09df7d 231 Gene3D G3DSA:3.40.50.300 1 228 3.8E-64 T 14-10-2018 BJD94_18025 ae06b3759cb6bd2a0319ef364a09df7d 231 SUPERFAMILY SSF52540 1 224 4.29E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18025 ae06b3759cb6bd2a0319ef364a09df7d 231 SMART SM00382 30 217 5.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18025 ae06b3759cb6bd2a0319ef364a09df7d 231 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_13630 1ce75f08fdda6c370aef818311248dcc 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 8.0E-31 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BJD94_13630 1ce75f08fdda6c370aef818311248dcc 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.7E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BJD94_13630 1ce75f08fdda6c370aef818311248dcc 68 Gene3D G3DSA:3.30.1910.10 1 63 1.9E-30 T 14-10-2018 BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 1.5E-81 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.9E-68 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 Gene3D G3DSA:3.50.30.40 1 161 6.6E-63 T 14-10-2018 BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.68 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 SUPERFAMILY SSF89562 2 158 1.27E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BJD94_12665 59e12db22e0edbb38718926ba84d1948 170 Pfam PF03737 Aldolase/RraA 6 152 5.5E-40 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BJD94_16660 d6c107ddf8a4a4a46c4d278edafb1366 542 SUPERFAMILY SSF56801 25 537 5.76E-124 T 14-10-2018 BJD94_16660 d6c107ddf8a4a4a46c4d278edafb1366 542 Pfam PF00501 AMP-binding enzyme 44 446 1.8E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_16660 d6c107ddf8a4a4a46c4d278edafb1366 542 Gene3D G3DSA:3.30.300.310 442 540 3.8E-24 T 14-10-2018 BJD94_16660 d6c107ddf8a4a4a46c4d278edafb1366 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 530 5.7E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD94_16660 d6c107ddf8a4a4a46c4d278edafb1366 542 Gene3D G3DSA:3.40.50.12780 10 441 3.4E-113 T 14-10-2018 BJD94_02995 4bd183544b05eef988e14cec8ad481ff 159 Gene3D G3DSA:3.40.630.30 11 156 3.7E-22 T 14-10-2018 BJD94_02995 4bd183544b05eef988e14cec8ad481ff 159 SUPERFAMILY SSF55729 11 147 4.97E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02995 4bd183544b05eef988e14cec8ad481ff 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.1E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_20265 d240c6d5cda167bd85b8a6aa1e5cc680 221 Gene3D G3DSA:2.70.70.10 57 186 4.7E-23 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_20265 d240c6d5cda167bd85b8a6aa1e5cc680 221 Pfam PF01551 Peptidase family M23 85 180 1.2E-18 T 14-10-2018 IPR016047 Peptidase M23 BJD94_20265 d240c6d5cda167bd85b8a6aa1e5cc680 221 SUPERFAMILY SSF51261 57 179 1.31E-21 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Gene3D G3DSA:2.40.50.140 1 88 1.7E-28 T 14-10-2018 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Gene3D G3DSA:3.40.1350.30 135 271 7.8E-118 T 14-10-2018 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 SUPERFAMILY SSF50249 9 69 7.42E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 SUPERFAMILY SSF53335 76 438 5.09E-86 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Gene3D G3DSA:3.40.50.150 89 433 7.8E-118 T 14-10-2018 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 438 63.978 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Pfam PF01938 TRAM domain 17 68 3.4E-12 T 14-10-2018 IPR002792 TRAM domain BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 437 1.1E-33 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.0E-129 T 14-10-2018 BJD94_13735 63af0a5854d04510fc9a280f76efda55 438 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BJD94_11430 a6c9545ae03d9be7920757701a392789 435 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 184 196 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BJD94_11430 a6c9545ae03d9be7920757701a392789 435 Gene3D G3DSA:1.10.510.10 140 303 1.5E-27 T 14-10-2018 BJD94_11430 a6c9545ae03d9be7920757701a392789 435 Gene3D G3DSA:3.30.200.20 57 139 8.0E-20 T 14-10-2018 BJD94_11430 a6c9545ae03d9be7920757701a392789 435 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 71 96 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BJD94_11430 a6c9545ae03d9be7920757701a392789 435 SUPERFAMILY SSF56112 61 305 2.97E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_11430 a6c9545ae03d9be7920757701a392789 435 Pfam PF00069 Protein kinase domain 65 260 1.4E-35 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD94_11430 a6c9545ae03d9be7920757701a392789 435 SMART SM00220 65 312 8.2E-27 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD94_09580 99789f4bd1d97542f60d6df8a5a9da88 447 Gene3D G3DSA:3.30.2290.10 2 233 8.1E-84 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD94_09580 99789f4bd1d97542f60d6df8a5a9da88 447 SUPERFAMILY SSF111283 12 447 1.7E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD94_09580 99789f4bd1d97542f60d6df8a5a9da88 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.3E-62 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 Pfam PF00155 Aminotransferase class I and II 27 392 6.7E-83 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 Gene3D G3DSA:3.90.1150.10 5 392 3.7E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 SUPERFAMILY SSF53383 1 395 7.26E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.9E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.9E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.9E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.9E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_01945 7cfebc4df2de63134713170ec61b026a 396 Gene3D G3DSA:3.40.640.10 60 300 3.7E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 Pfam PF00764 Arginosuccinate synthase 10 396 8.6E-146 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 SUPERFAMILY SSF69864 177 403 1.57E-87 T 14-10-2018 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 Gene3D G3DSA:3.40.50.620 9 177 2.3E-145 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 Gene3D G3DSA:3.90.1260.10 68 356 2.3E-145 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 Gene3D G3DSA:1.20.5.470 368 403 1.5E-7 T 14-10-2018 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.089 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 3.7E-137 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12755 1351dc5c826d8f69a626df193e5785cf 404 SUPERFAMILY SSF52402 7 170 2.43E-47 T 14-10-2018 BJD94_18290 028c20f6987397646a8b43c5076554ab 199 Pfam PF02630 SCO1/SenC 21 177 9.1E-33 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_18290 028c20f6987397646a8b43c5076554ab 199 SUPERFAMILY SSF52833 42 196 1.26E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_18290 028c20f6987397646a8b43c5076554ab 199 Gene3D G3DSA:3.40.30.10 25 197 1.2E-38 T 14-10-2018 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Gene3D G3DSA:1.10.1040.50 497 698 7.0E-71 T 14-10-2018 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 SUPERFAMILY SSF48179 610 704 2.38E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 SUPERFAMILY SSF52096 3 302 1.41E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 SUPERFAMILY SSF51735 313 491 7.89E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 7.4E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 3.2E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Gene3D G3DSA:3.90.226.10 1 309 5.0E-97 T 14-10-2018 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 SUPERFAMILY SSF48179 494 593 2.64E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Gene3D G3DSA:3.40.50.720 312 496 2.1E-58 T 14-10-2018 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 214 2.6E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 54.076 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_00795 cae6773803415588e683dbc2cb1b0977 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 3.0E-54 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 SUPERFAMILY SSF53383 119 480 1.81E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 SMART SM00345 22 81 5.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 SUPERFAMILY SSF46785 19 82 9.63E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 Pfam PF00155 Aminotransferase class I and II 128 444 1.5E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 Gene3D G3DSA:1.10.10.10 14 82 3.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 6.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 Gene3D G3DSA:3.40.640.10 105 472 2.8E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 7.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_16360 88f8ff80f053271ba01398039c36c1f5 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 7.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.5E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 SUPERFAMILY SSF46561 1 61 2.62E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 Gene3D G3DSA:1.10.287.310 1 63 1.2E-31 T 14-10-2018 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.5E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09840 5273cc45afa3f4f8b8c3e126ef70d552 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.125 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Gene3D G3DSA:3.40.50.2300 119 252 1.2E-31 T 14-10-2018 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SMART SM00448 3 115 3.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SMART SM00448 124 238 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SMART SM00267 244 404 4.6E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Gene3D G3DSA:3.30.70.270 253 404 2.7E-39 T 14-10-2018 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 4.8E-32 T 14-10-2018 IPR000160 GGDEF domain BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Pfam PF00072 Response regulator receiver domain 127 235 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Pfam PF00072 Response regulator receiver domain 5 104 7.6E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SUPERFAMILY SSF55073 260 402 3.61E-34 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SUPERFAMILY SSF52172 124 261 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 Gene3D G3DSA:3.40.50.2300 2 118 7.4E-18 T 14-10-2018 BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 SUPERFAMILY SSF52172 4 123 7.54E-21 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00115 6449f4c07917e94aaeb21112dc001332 404 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 4.8E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 SUPERFAMILY SSF53383 10 383 1.69E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 Gene3D G3DSA:3.90.1150.10 249 387 2.4E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 382 1.3E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 PIRSF PIRSF001434 1 385 2.8E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 Gene3D G3DSA:3.40.640.10 3 248 1.4E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_12715 9a571f0b846fa0079e6c68550c1a61a9 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 6.2E-199 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Gene3D G3DSA:1.20.58.410 1 34 5.0E-5 T 14-10-2018 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 SMART SM00937 3 113 1.1E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 281 2.4E-145 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Gene3D G3DSA:3.30.160.20 144 239 1.6E-96 T 14-10-2018 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Pfam PF00472 RF-1 domain 147 255 1.6E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 SUPERFAMILY SSF75620 2 282 3.66E-122 T 14-10-2018 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 283 30.95 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Gene3D G3DSA:3.30.70.1660 48 276 1.6E-96 T 14-10-2018 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 Pfam PF03462 PCRF domain 7 137 1.3E-45 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD94_08645 91b1955aef8abf151f372659bf51d272 283 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 163 179 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Pfam PF00072 Response regulator receiver domain 591 702 1.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SUPERFAMILY SSF55874 288 459 2.23E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SMART SM00388 234 299 8.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SUPERFAMILY SSF52172 588 705 2.56E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Gene3D G3DSA:3.30.565.10 298 462 2.0E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 459 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Gene3D G3DSA:3.40.50.2300 586 706 3.1E-34 T 14-10-2018 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SMART SM00387 346 461 2.9E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SMART SM00448 589 702 6.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Gene3D G3DSA:1.10.287.130 204 297 8.3E-24 T 14-10-2018 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 SUPERFAMILY SSF47384 221 300 1.53E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17085 09fcfed086ad74349fd609214ec0d75c 716 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 299 8.5E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_13960 b569f6e4e4f186e0b843ed7bfd5c6086 246 Pfam PF07072 Cell division protein 18 224 2.8E-76 T 14-10-2018 IPR009777 Cell division protein ZapD BJD94_13960 b569f6e4e4f186e0b843ed7bfd5c6086 246 Gene3D G3DSA:1.10.3900.10 12 172 4.5E-53 T 14-10-2018 BJD94_13960 b569f6e4e4f186e0b843ed7bfd5c6086 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.52 T 14-10-2018 IPR009777 Cell division protein ZapD BJD94_13960 b569f6e4e4f186e0b843ed7bfd5c6086 246 SUPERFAMILY SSF160950 1 245 8.76E-93 T 14-10-2018 IPR036268 ZapD domain superfamily BJD94_13960 b569f6e4e4f186e0b843ed7bfd5c6086 246 Gene3D G3DSA:2.60.440.10 173 245 7.9E-34 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal BJD94_01610 9b2dc07bb57a9d853e7e9edffcff3e44 438 Pfam PF13657 HipA N-terminal domain 8 117 1.2E-21 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 BJD94_01610 9b2dc07bb57a9d853e7e9edffcff3e44 438 Pfam PF07804 HipA-like C-terminal domain 174 411 8.2E-47 T 14-10-2018 IPR012893 HipA-like, C-terminal BJD94_17015 a44955835825c54cf601f6adad968df8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.2E-60 T 14-10-2018 BJD94_17015 a44955835825c54cf601f6adad968df8 253 SUPERFAMILY SSF51735 9 251 1.62E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_17015 a44955835825c54cf601f6adad968df8 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_17015 a44955835825c54cf601f6adad968df8 253 Gene3D G3DSA:3.40.50.720 1 252 8.4E-83 T 14-10-2018 BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.3E-134 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_17015 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05980 45f15b56f25203d88bc650a1b5b63247 293 Pfam PF02811 PHP domain 4 169 7.2E-11 T 14-10-2018 IPR004013 PHP domain GO:0003824 BJD94_05980 45f15b56f25203d88bc650a1b5b63247 293 SUPERFAMILY SSF89550 1 275 5.49E-55 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BJD94_05980 45f15b56f25203d88bc650a1b5b63247 293 Gene3D G3DSA:3.20.20.140 3 250 1.3E-83 T 14-10-2018 BJD94_05980 45f15b56f25203d88bc650a1b5b63247 293 SMART SM00481 3 70 7.9E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD94_05980 45f15b56f25203d88bc650a1b5b63247 293 Gene3D G3DSA:1.10.150.650 98 169 1.3E-83 T 14-10-2018 BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 SUPERFAMILY SSF54197 2 113 2.94E-34 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 Pfam PF01230 HIT domain 12 108 1.2E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 Gene3D G3DSA:3.30.428.10 1 111 8.0E-36 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 6 22 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 27 45 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BJD94_01070 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 95 105 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF53067 85 391 5.94E-56 T 14-10-2018 BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 SUPERFAMILY SSF46785 11 75 5.96E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 Pfam PF00480 ROK family 86 390 1.4E-77 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 90 384 6.2E-94 T 14-10-2018 BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07075 d92b6f067c5c660fee8a2ef8f3b52063 404 Gene3D G3DSA:3.30.420.40 207 376 6.2E-94 T 14-10-2018 BJD94_14270 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF54534 81 156 7.98E-24 T 14-10-2018 BJD94_14270 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.554 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BJD94_14270 3447e47c1d4980544692625facd3423f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 6.5E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.3E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 PIRSF PIRSF006092 1 157 4.4E-48 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD94_14270 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF46557 2 75 5.49E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.2E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:1.10.287.180 1 74 7.8E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD94_14270 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:3.10.50.30 75 157 1.1E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 SUPERFAMILY SSF58104 313 620 3.79E-74 T 14-10-2018 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 588 2.1E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Gene3D G3DSA:3.30.450.20 49 265 8.8E-78 T 14-10-2018 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 SUPERFAMILY SSF103190 87 183 9.42E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Pfam PF02743 Cache domain 34 254 1.1E-31 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Pfam PF00672 HAMP domain 291 342 9.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Gene3D G3DSA:1.10.287.950 290 622 5.8E-70 T 14-10-2018 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 SMART SM00283 360 621 2.2E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 SMART SM00304 373 440 89.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 SMART SM00304 291 345 5.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19985 4a7fff96b52b268f102f14664bbd77ea 622 Gene3D G3DSA:3.30.450.20 62 172 8.8E-78 T 14-10-2018 BJD94_18145 3d0f41a4fb43ab47c816945ee8f73c00 283 Pfam PF12146 Serine aminopeptidase, S33 84 184 4.5E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BJD94_18145 3d0f41a4fb43ab47c816945ee8f73c00 283 SUPERFAMILY SSF53474 34 268 3.47E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_18145 3d0f41a4fb43ab47c816945ee8f73c00 283 Pfam PF08386 TAP-like protein 212 270 1.4E-4 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BJD94_18145 3d0f41a4fb43ab47c816945ee8f73c00 283 Gene3D G3DSA:3.40.50.1820 61 276 6.6E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_18625 404843d160dc1a2ca6412e8faf2e3351 565 Pfam PF00849 RNA pseudouridylate synthase 371 518 4.4E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_18625 404843d160dc1a2ca6412e8faf2e3351 565 SUPERFAMILY SSF55120 355 562 9.92E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_18625 404843d160dc1a2ca6412e8faf2e3351 565 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 409 423 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_18625 404843d160dc1a2ca6412e8faf2e3351 565 Gene3D G3DSA:3.30.2350.10 353 564 1.9E-61 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Pfam PF00990 Diguanylate cyclase, GGDEF domain 462 610 1.7E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SMART SM00267 449 614 7.6E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SUPERFAMILY SSF55785 347 457 8.54E-16 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SUPERFAMILY SSF103190 31 201 1.73E-42 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Gene3D G3DSA:3.30.450.20 68 201 1.8E-30 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 612 1.1E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SUPERFAMILY SSF103190 202 293 6.28E-22 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Gene3D G3DSA:3.30.70.270 464 619 1.6E-42 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Gene3D G3DSA:1.20.5.170 21 67 7.2E-22 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Gene3D G3DSA:3.30.450.20 334 463 1.8E-19 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Gene3D G3DSA:3.30.450.20 202 297 2.3E-35 T 14-10-2018 BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 456 9.4E-12 T 14-10-2018 IPR000014 PAS domain BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SUPERFAMILY SSF55073 465 613 7.14E-37 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 SMART SM00091 335 402 0.0028 T 14-10-2018 IPR000014 PAS domain BJD94_09320 916815ed3a5140d60fa0c16530f131c2 621 Pfam PF13426 PAS domain 347 447 3.5E-9 T 14-10-2018 IPR000014 PAS domain BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 SUPERFAMILY SSF53720 21 463 1.44E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 252 263 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 Gene3D G3DSA:3.40.309.10 228 429 9.5E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 Pfam PF00171 Aldehyde dehydrogenase family 22 448 1.2E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 PIRSF PIRSF036492 7 492 8.5E-164 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_20505 44e584146f8b4f2a7b3c309b3da85036 504 Gene3D G3DSA:3.40.605.10 26 449 9.5E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 Pfam PF00263 Bacterial type II and III secretion system protein 355 532 2.7E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 246 532 1.2E-91 T 14-10-2018 IPR013358 Pilus biogenesis, MshL BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 Pfam PF07655 Secretin N-terminal domain 148 251 1.3E-25 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 Gene3D G3DSA:3.55.50.30 52 148 2.0E-9 T 14-10-2018 BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 SMART SM00965 96 144 1.9E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 280 290 1.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 1.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 497 515 1.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_13070 d92d43d87c77b1415f2ed21a865918d2 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 520 534 1.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Gene3D G3DSA:3.40.50.10490 249 608 5.3E-149 T 14-10-2018 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Pfam PF13522 Glutamine amidotransferase domain 55 191 5.9E-23 T 14-10-2018 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 SUPERFAMILY SSF56235 2 234 2.32E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.663 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 SUPERFAMILY SSF53697 245 609 9.28E-112 T 14-10-2018 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Gene3D G3DSA:3.40.50.10490 447 594 5.3E-149 T 14-10-2018 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Pfam PF01380 SIS domain 462 591 2.6E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Pfam PF01380 SIS domain 289 417 9.6E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.0E-260 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BJD94_09300 d4517d306cf0e90fb53ba29e0875b6c2 609 Gene3D G3DSA:3.60.20.10 2 241 9.4E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SUPERFAMILY SSF82171 157 543 4.32E-32 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SMART SM00245 864 1059 1.4E-4 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:3.90.226.10 881 1088 7.6E-49 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF03572 Peptidase family S41 903 1057 7.2E-20 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:2.120.10.30 412 590 3.2E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 73 105 7.1E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 517 544 4.3E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 370 404 4.4E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 229 264 3.9E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 43 56 0.059 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:2.30.42.10 800 880 2.4E-8 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:2.120.10.60 334 411 3.6E-7 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:2.120.10.60 30 321 2.4E-52 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 PIRSF PIRSF036421 28 1088 5.4E-205 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF14685 Tricorn protease PDZ domain 822 864 3.1E-6 T 14-10-2018 IPR029414 Tricorn protease, PDZ domain BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SUPERFAMILY SSF50156 793 871 6.97E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Gene3D G3DSA:3.30.750.44 708 779 4.7E-14 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SUPERFAMILY SSF69304 42 306 1.44E-35 T 14-10-2018 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SMART SM00228 789 862 1.1E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 SUPERFAMILY SSF52096 708 1085 3.64E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_19515 2739742672378c3cb11400ee2be74a3c 1088 Pfam PF14684 Tricorn protease C1 domain 711 779 7.8E-26 T 14-10-2018 IPR028204 Tricorn protease C1 domain BJD94_19540 396ad63c7a0bfdb01c49885c039ca2fd 376 Gene3D G3DSA:2.40.30.170 256 341 8.1E-34 T 14-10-2018 BJD94_19540 396ad63c7a0bfdb01c49885c039ca2fd 376 Gene3D G3DSA:2.40.50.100 62 255 8.1E-34 T 14-10-2018 BJD94_19540 396ad63c7a0bfdb01c49885c039ca2fd 376 SUPERFAMILY SSF111369 61 186 1.96E-9 T 14-10-2018 BJD94_19540 396ad63c7a0bfdb01c49885c039ca2fd 376 Gene3D G3DSA:1.10.287.470 96 219 8.1E-34 T 14-10-2018 BJD94_19540 396ad63c7a0bfdb01c49885c039ca2fd 376 Pfam PF13533 Biotin-lipoyl like 64 111 1.2E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 Pfam PF00501 AMP-binding enzyme 9 110 1.4E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 Pfam PF00501 AMP-binding enzyme 143 378 2.2E-42 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 Gene3D G3DSA:1.20.910.10 506 730 3.3E-55 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 SUPERFAMILY SSF56801 2 489 6.93E-83 T 14-10-2018 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 SUPERFAMILY SSF48613 494 722 2.92E-59 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 SMART SM01236 577 678 4.2E-7 T 14-10-2018 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 Pfam PF14518 Iron-containing redox enzyme 543 713 9.0E-24 T 14-10-2018 BJD94_18460 b2a7227b91b348b84584fd784853ee2b 730 Gene3D G3DSA:3.40.50.12780 4 371 1.3E-69 T 14-10-2018 BJD94_04405 49081815fd8d4eab166909c3c169407d 257 Pfam PF12838 4Fe-4S dicluster domain 65 120 6.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_04405 49081815fd8d4eab166909c3c169407d 257 Pfam PF12838 4Fe-4S dicluster domain 151 204 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_04405 49081815fd8d4eab166909c3c169407d 257 Gene3D G3DSA:3.30.70.20 61 137 2.1E-10 T 14-10-2018 BJD94_04405 49081815fd8d4eab166909c3c169407d 257 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 12 221 1.2E-75 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein BJD94_04405 49081815fd8d4eab166909c3c169407d 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_04405 49081815fd8d4eab166909c3c169407d 257 Gene3D G3DSA:3.30.70.20 140 224 4.8E-11 T 14-10-2018 BJD94_04405 49081815fd8d4eab166909c3c169407d 257 SUPERFAMILY SSF54862 65 214 2.46E-27 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SUPERFAMILY SSF55021 689 762 8.33E-8 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 PIRSF PIRSF006288 6 873 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SUPERFAMILY SSF55021 796 854 4.58E-7 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SUPERFAMILY SSF109604 416 593 5.34E-15 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 Pfam PF01909 Nucleotidyltransferase domain 69 117 6.2E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 335.259 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 5.9E-35 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SMART SM00471 447 594 3.1E-10 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_00225 182d28f26800643aaae0f4afc7735232 873 Gene3D G3DSA:1.10.3210.10 435 591 4.7E-10 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SUPERFAMILY SSF81593 200 310 6.91E-9 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 SUPERFAMILY SSF81301 34 172 2.2E-19 T 14-10-2018 BJD94_00225 182d28f26800643aaae0f4afc7735232 873 Pfam PF01966 HD domain 453 584 1.0E-13 T 14-10-2018 IPR006674 HD domain BJD94_10340 079e3370009e99244106bb483f980647 210 SUPERFAMILY SSF74653 121 207 1.01E-17 T 14-10-2018 BJD94_10340 079e3370009e99244106bb483f980647 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 2.1E-11 T 14-10-2018 IPR006260 TonB/TolA, C-terminal BJD94_10340 079e3370009e99244106bb483f980647 210 Gene3D G3DSA:3.30.1150.10 111 209 5.5E-21 T 14-10-2018 BJD94_10340 079e3370009e99244106bb483f980647 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 5.6E-15 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 SMART SM00487 2 174 1.2E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Pfam PF00270 DEAD/DEAH box helicase 14 153 9.1E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 SMART SM00847 372 460 0.0037 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Pfam PF04408 Helicase associated domain (HA2) 373 446 2.1E-5 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 SMART SM00490 219 315 7.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Pfam PF00271 Helicase conserved C-terminal domain 196 314 3.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Gene3D G3DSA:3.40.50.300 1 163 3.3E-42 T 14-10-2018 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 SUPERFAMILY SSF52540 19 326 1.7E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Gene3D G3DSA:1.20.120.1080 356 453 8.0E-7 T 14-10-2018 BJD94_04855 8b14aba7d53c05bb7e14d7dd50f242d8 781 Gene3D G3DSA:3.40.50.300 168 331 2.1E-43 T 14-10-2018 BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 SUPERFAMILY SSF46548 14 92 9.59E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 Pfam PF02754 Cysteine-rich domain 175 260 3.7E-16 T 14-10-2018 IPR004017 Cysteine-rich domain BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 Pfam PF02754 Cysteine-rich domain 304 387 7.6E-12 T 14-10-2018 IPR004017 Cysteine-rich domain BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 406 4.5E-219 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 Gene3D G3DSA:1.10.1060.10 2 97 5.6E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_20345 bb1eadd27e3f2d32736d05ce7f46a06f 407 Pfam PF13183 4Fe-4S dicluster domain 15 79 9.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 1.1E-118 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 163 9.9E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 PIRSF PIRSF000903 1 269 4.8E-122 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 SUPERFAMILY SSF56300 4 250 2.17E-53 T 14-10-2018 BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 Gene3D G3DSA:3.60.21.10 2 269 1.6E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_09415 7488a555ba7b64e23e2d60240cd0e99d 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 47.925 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:2.60.120.10 10 138 6.1E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF51206 8 136 1.7E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00100 2 122 5.9E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.4E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_12505 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 SMART SM00028 172 205 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 SMART SM00028 240 273 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 SMART SM00028 206 239 0.073 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 SUPERFAMILY SSF48452 170 284 2.95E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 Pfam PF13432 Tetratricopeptide repeat 186 239 2.9E-8 T 14-10-2018 BJD94_21030 b65d5e2da5a9ed9a972f5cab189faef9 356 Gene3D G3DSA:1.25.40.10 132 304 1.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 ProSitePatterns PS00512 Alpha-galactosidase signature. 325 340 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Gene3D G3DSA:2.70.98.60 1 275 3.1E-50 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 611 692 1.3E-9 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 SUPERFAMILY SSF51445 291 623 1.6E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 374 396 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 339 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 432 447 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 505 521 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 296 310 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 258 278 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 480 496 3.6E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Gene3D G3DSA:3.20.20.70 276 592 4.3E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 PIRSF PIRSF005536 1 704 2.6E-231 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Pfam PF02065 Melibiase 255 594 1.3E-119 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 237 2.4E-42 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_18680 ed42519b1f1aef387cc090b7d3e41de4 706 Gene3D G3DSA:2.60.40.1180 593 704 7.7E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 Gene3D G3DSA:3.50.50.60 4 529 9.8E-184 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 Gene3D G3DSA:3.30.560.10 43 467 9.8E-184 T 14-10-2018 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 PIRSF PIRSF000137 1 539 1.8E-149 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 Pfam PF00732 GMC oxidoreductase 4 294 1.8E-90 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 Pfam PF05199 GMC oxidoreductase 387 524 2.8E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 SUPERFAMILY SSF54373 289 472 9.22E-47 T 14-10-2018 BJD94_01430 d968573743e06b14fdfa50d6387b8d62 546 SUPERFAMILY SSF51905 2 532 6.15E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 Gene3D G3DSA:2.40.30.10 241 327 7.3E-27 T 14-10-2018 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 Gene3D G3DSA:3.40.50.300 5 239 3.0E-73 T 14-10-2018 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 SUPERFAMILY SSF50447 242 327 9.94E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 SUPERFAMILY SSF50465 332 433 6.23E-31 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.004 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 216 8.9E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 219 1.4E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 Gene3D G3DSA:2.40.30.10 331 434 1.7E-30 T 14-10-2018 BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 SUPERFAMILY SSF52540 19 234 2.61E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09700 e595b9954eb61d0e4947ce21fe76cb26 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 8.2E-201 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 SUPERFAMILY SSF46689 489 584 2.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Pfam PF01590 GAF domain 91 185 9.8E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Gene3D G3DSA:3.30.450.40 4 188 2.3E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Pfam PF00158 Sigma-54 interaction domain 285 447 3.7E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 SMART SM00382 300 444 4.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Gene3D G3DSA:3.40.50.300 268 452 3.7E-55 T 14-10-2018 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Gene3D G3DSA:1.10.10.60 522 584 6.7E-10 T 14-10-2018 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Gene3D G3DSA:1.10.8.60 453 521 1.2E-10 T 14-10-2018 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 5.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 5.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_16785 b687f8665820e5bf6413fc930e8f9bee 589 SUPERFAMILY SSF52540 284 510 1.99E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 8.1E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 Pfam PF00696 Amino acid kinase family 11 219 7.2E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 Gene3D G3DSA:3.40.1160.10 3 241 1.3E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 PIRSF PIRSF005650 4 241 3.7E-88 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 SUPERFAMILY SSF53633 7 240 6.02E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_00245 3d06ac01fa6bb9dc010c0e90dfbd92f9 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.86 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.9E-199 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 Gene3D G3DSA:2.40.50.140 10 155 2.4E-28 T 14-10-2018 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 SUPERFAMILY SSF55681 161 507 2.4E-118 T 14-10-2018 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 SUPERFAMILY SSF50249 16 154 1.27E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.193 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 7.1E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 Gene3D G3DSA:3.30.930.10 156 506 2.1E-130 T 14-10-2018 BJD94_08640 d379c45a29f376cf2763a58674abeebd 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 1.6E-80 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 SMART SM00347 27 127 4.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 Gene3D G3DSA:1.10.10.10 4 140 1.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 SUPERFAMILY SSF46785 7 143 1.15E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 3.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 3.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_01915 d0bf0cba4ec0c9b4a238f67023bf4a08 164 Pfam PF01047 MarR family 34 92 1.7E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_11090 e4739bae5e2ad5a87e0e5c2209f382ce 154 Pfam PF00430 ATP synthase B/B' CF(0) 4 135 3.8E-36 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD94_11090 e4739bae5e2ad5a87e0e5c2209f382ce 154 SUPERFAMILY SSF81573 61 119 1.57E-14 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BJD94_11090 e4739bae5e2ad5a87e0e5c2209f382ce 154 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 136 13.335 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD94_11090 e4739bae5e2ad5a87e0e5c2209f382ce 154 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 8 154 4.7E-59 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BJD94_11090 e4739bae5e2ad5a87e0e5c2209f382ce 154 Gene3D G3DSA:1.20.5.620 60 120 7.5E-22 T 14-10-2018 BJD94_16695 fb6bd0c56d9aa2f76f46327891ce9111 256 SMART SM00849 12 211 6.3E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16695 fb6bd0c56d9aa2f76f46327891ce9111 256 Pfam PF00753 Metallo-beta-lactamase superfamily 15 211 1.4E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16695 fb6bd0c56d9aa2f76f46327891ce9111 256 SUPERFAMILY SSF56281 11 226 1.83E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_16695 fb6bd0c56d9aa2f76f46327891ce9111 256 Gene3D G3DSA:3.60.15.10 4 233 7.5E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 3.4E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 SUPERFAMILY SSF55424 344 466 9.28E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Gene3D G3DSA:3.40.250.10 471 564 4.9E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.1E-23 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.1E-23 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.1E-23 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.1E-23 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-23 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 SUPERFAMILY SSF52821 459 563 1.19E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 SUPERFAMILY SSF51905 1 338 7.33E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 SMART SM00450 473 567 4.6E-13 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.0E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Gene3D G3DSA:3.50.50.60 115 461 2.2E-185 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Pfam PF00581 Rhodanese-like domain 482 562 1.2E-9 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 Gene3D G3DSA:3.50.50.60 3 361 2.2E-185 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 14-10-2018 BJD94_21700 9345e77a3d1b419d518600184a20a20e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 14-10-2018 BJD94_18560 373e59b0004f7f0f864d3f3763e7f2f5 615 SUPERFAMILY SSF49785 456 615 4.68E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18560 373e59b0004f7f0f864d3f3763e7f2f5 615 SUPERFAMILY SSF51445 85 404 1.18E-42 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18560 373e59b0004f7f0f864d3f3763e7f2f5 615 Gene3D G3DSA:2.60.120.430 472 606 4.4E-16 T 14-10-2018 BJD94_18560 373e59b0004f7f0f864d3f3763e7f2f5 615 Gene3D G3DSA:3.20.20.80 76 410 3.9E-11 T 14-10-2018 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 SUPERFAMILY SSF102114 84 288 1.45E-5 T 14-10-2018 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 Pfam PF04055 Radical SAM superfamily 29 224 9.5E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 Pfam PF13353 4Fe-4S single cluster domain 21 146 7.9E-8 T 14-10-2018 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 287 9.0E-124 T 14-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 SUPERFAMILY SSF54862 28 143 3.21E-16 T 14-10-2018 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 Gene3D G3DSA:3.20.20.70 68 279 2.6E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 Gene3D G3DSA:3.20.20.70 8 67 2.5E-12 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_02105 d38fe445e1b4e09c8f99c0c289b591dc 297 PIRSF PIRSF000371 1 293 1.4E-82 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 1.2E-92 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 SUPERFAMILY SSF56601 12 284 1.92E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 2.0E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 Gene3D G3DSA:2.60.410.10 284 374 1.2E-30 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 4.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 4.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 4.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 Gene3D G3DSA:3.40.710.10 28 283 3.8E-90 T 14-10-2018 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 SUPERFAMILY SSF69189 284 376 9.22E-28 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_07645 88382e570eb1c6d769a20925ba09739a 393 SMART SM00936 284 374 1.4E-37 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 Pfam PF11612 Type II secretion system (T2SS), protein J 67 204 1.7E-39 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 3.3E-82 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 3.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 5.7E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 Gene3D G3DSA:2.10.70.20 161 209 3.6E-15 T 14-10-2018 BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 SUPERFAMILY SSF54523 48 211 3.73E-56 T 14-10-2018 BJD94_10450 6a104de447a0339ea34e64e3e1d09bc2 233 Gene3D G3DSA:3.10.610.10 46 159 1.4E-35 T 14-10-2018 BJD94_08005 684109a2497b55efd455572c1a2dc4f0 428 SUPERFAMILY SSF51004 34 420 5.23E-10 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 SUPERFAMILY SSF55486 1 490 1.15E-119 T 14-10-2018 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PIRSF PIRSF006615 1 490 9.2E-202 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 Gene3D G3DSA:1.10.1370.30 1 490 1.2E-194 T 14-10-2018 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 6 489 1.3E-98 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_04390 5dda96b117196e9effa2841b03433a8b 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 4.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 Gene3D G3DSA:1.10.10.920 371 463 1.0E-33 T 14-10-2018 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 Pfam PF06969 HemN C-terminal domain 369 437 2.8E-10 T 14-10-2018 IPR010723 HemN, C-terminal BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 PIRSF PIRSF000167 9 460 1.9E-172 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 SMART SM00729 58 278 1.7E-51 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 SUPERFAMILY SSF102114 12 450 4.05E-143 T 14-10-2018 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 5.1E-208 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 Pfam PF04055 Radical SAM superfamily 63 234 2.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_10565 a1c6490247edc81f774e3dbd84938cbb 463 Gene3D G3DSA:3.80.30.20 7 369 1.8E-137 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Pfam PF00072 Response regulator receiver domain 736 845 1.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:3.30.450.20 344 474 1.0E-6 T 14-10-2018 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 8.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 8.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 8.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 8.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SMART SM00388 483 548 1.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SUPERFAMILY SSF52172 732 853 2.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 548 2.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 12 360 0.0 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:1.10.287.130 475 548 5.7E-21 T 14-10-2018 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SUPERFAMILY SSF55785 348 461 4.02E-6 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SUPERFAMILY SSF47384 471 549 6.28E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Pfam PF09308 LuxQ, periplasmic 40 277 3.7E-101 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:3.30.450.220 50 206 1.3E-57 T 14-10-2018 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:3.40.50.2300 731 849 3.2E-34 T 14-10-2018 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 595 711 7.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:2.20.20.100 207 270 2.4E-6 T 14-10-2018 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SMART SM00387 595 712 2.7E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SUPERFAMILY SSF103190 51 269 5.81E-69 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 Gene3D G3DSA:3.30.565.10 549 715 5.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SMART SM00448 734 846 2.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16170 83c0735495a9ed1d78491623306bfcbf 857 SUPERFAMILY SSF55874 537 710 3.41E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 Gene3D G3DSA:1.10.10.10 1 138 4.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 Pfam PF01047 MarR family 32 88 7.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 SMART SM00347 24 124 5.4E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15945 a58dcd53989c9bef2a392d22b03b9fa6 138 SUPERFAMILY SSF46785 6 136 6.84E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 244 2.3E-55 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 Pfam PF13531 Bacterial extracellular solute-binding protein 24 245 2.7E-42 T 14-10-2018 BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 Gene3D G3DSA:3.40.190.10 101 211 2.3E-68 T 14-10-2018 BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 PIRSF PIRSF004846 2 249 2.1E-61 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 SUPERFAMILY SSF53850 24 246 9.78E-56 T 14-10-2018 BJD94_21625 c4a53dba77f39f3f45a791f39678b524 251 Gene3D G3DSA:3.40.190.10 25 245 2.3E-68 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 SUPERFAMILY SSF51735 108 295 3.86E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13590 78939bee06f968279f713117c046ff8c 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.6E-39 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD94_13590 78939bee06f968279f713117c046ff8c 409 Gene3D G3DSA:3.40.50.720 109 297 1.5E-111 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_13590 78939bee06f968279f713117c046ff8c 409 SUPERFAMILY SSF55021 335 408 8.02E-18 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 Gene3D G3DSA:3.40.50.720 14 312 1.5E-111 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 SUPERFAMILY SSF52283 7 136 9.99E-50 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_13590 78939bee06f968279f713117c046ff8c 409 Gene3D G3DSA:3.30.70.260 328 408 2.6E-33 T 14-10-2018 BJD94_13590 78939bee06f968279f713117c046ff8c 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.0E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_13590 78939bee06f968279f713117c046ff8c 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 Gene3D G3DSA:3.30.420.40 3 195 4.8E-66 T 14-10-2018 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 Pfam PF00871 Acetokinase family 6 391 2.2E-141 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 SUPERFAMILY SSF53067 158 396 8.64E-79 T 14-10-2018 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 SUPERFAMILY SSF53067 5 196 4.6E-62 T 14-10-2018 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 Gene3D G3DSA:3.30.420.40 198 397 7.4E-72 T 14-10-2018 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 378 390 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 203 224 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 299 312 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 6 17 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 173 186 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PRINTS PR00471 Acetate kinase family signature 321 337 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 168.548 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 PIRSF PIRSF000722 2 397 2.1E-133 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_20925 126c7a04c48706f8d1a7ef5c970ddc64 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.3E-143 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 SUPERFAMILY SSF53383 1 395 1.93E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 Gene3D G3DSA:3.90.1150.10 11 389 5.4E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 Pfam PF00155 Aminotransferase class I and II 27 389 4.6E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_21650 ad78fcafe7bf4769165c9d34a666aaed 395 Gene3D G3DSA:3.40.640.10 45 312 5.4E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF52418 73 334 2.75E-89 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.254 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 PIRSF PIRSF000478 1 439 9.1E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:1.20.970.10 7 195 1.3E-127 T 14-10-2018 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.5E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF54680 337 437 8.89E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF47648 2 70 4.32E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.90.1170.30 337 431 1.7E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 9.0E-49 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.8E-213 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 SMART SM00941 350 424 2.8E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.4E-159 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.40.1030.10 70 322 1.3E-127 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14450 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 8.8E-24 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 PIRSF PIRSF002122 3 156 8.0E-64 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.1E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.149 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.0E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain BJD94_12600 426ba65b472db90d2cdbff529f92b2a6 156 SUPERFAMILY SSF47973 6 149 3.66E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BJD94_18765 4af03f851519f684f617d287e5550775 64 SUPERFAMILY SSF46689 14 63 1.08E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18765 4af03f851519f684f617d287e5550775 64 Gene3D G3DSA:1.10.10.60 9 64 2.7E-11 T 14-10-2018 BJD94_18765 4af03f851519f684f617d287e5550775 64 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 44 64 3.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_18765 4af03f851519f684f617d287e5550775 64 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 27 44 3.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 9 204 6.5E-183 T 14-10-2018 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 5.6E-194 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 2.0E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 SUPERFAMILY SSF53686 5 387 8.51E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 PIRSF PIRSF001413 1 396 5.0E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.65 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06010 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 53 383 6.5E-183 T 14-10-2018 BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 2 236 5.2E-95 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 PIRSF PIRSF005457 1 236 1.4E-89 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 Pfam PF00753 Metallo-beta-lactamase superfamily 2 150 1.6E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 Gene3D G3DSA:3.60.15.10 1 236 1.2E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 SUPERFAMILY SSF56281 5 236 2.23E-66 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 236 38.638 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 151 236 2.4E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD94_00350 4d001c6b3ac8d0b4ab2333901681d7aa 236 SMART SM00849 1 150 8.7E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_09555 b75ce06394affe2f39a71a000e14285b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.4E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD94_09555 b75ce06394affe2f39a71a000e14285b 95 Gene3D G3DSA:3.30.160.100 1 95 3.6E-38 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD94_09555 b75ce06394affe2f39a71a000e14285b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.2E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD94_09555 b75ce06394affe2f39a71a000e14285b 95 SUPERFAMILY SSF69754 1 95 1.29E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Pfam PF01627 Hpt domain 665 723 4.2E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SMART SM00388 239 304 8.2E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SMART SM00304 172 224 2.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SMART SM00387 351 466 1.8E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Gene3D G3DSA:1.20.120.160 636 750 2.2E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Pfam PF00072 Response regulator receiver domain 492 605 2.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 463 6.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SMART SM00448 490 605 3.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SUPERFAMILY SSF52172 487 610 9.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 6.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SUPERFAMILY SSF47226 640 752 3.4E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SUPERFAMILY SSF158472 175 221 1.57E-5 T 14-10-2018 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Gene3D G3DSA:3.40.50.2300 471 617 2.9E-40 T 14-10-2018 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Gene3D G3DSA:3.30.565.10 306 470 2.9E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SUPERFAMILY SSF47384 223 304 3.34E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Gene3D G3DSA:1.20.1480.50 136 227 3.1E-9 T 14-10-2018 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 Gene3D G3DSA:1.10.287.130 228 305 6.3E-21 T 14-10-2018 BJD94_04225 3cf0bd0b46f2183df3b4548375ca7b41 762 SUPERFAMILY SSF55874 293 462 7.73E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04070 bed290305df05bcb23f08dedb9824575 547 Pfam PF13654 AAA domain 106 288 6.8E-21 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 Gene3D G3DSA:3.40.50.300 99 196 4.5E-7 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 SUPERFAMILY SSF54211 314 506 1.78E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_04070 bed290305df05bcb23f08dedb9824575 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 506 1.9E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.5E-10 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.5E-10 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.5E-10 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.5E-10 T 14-10-2018 BJD94_04070 bed290305df05bcb23f08dedb9824575 547 Gene3D G3DSA:3.30.230.10 291 533 2.7E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 SMART SM00283 249 510 3.5E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 SMART SM00304 180 234 2.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 304 475 7.3E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 16 5.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 405 5.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 347 374 5.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 Gene3D G3DSA:1.10.287.950 180 511 4.3E-64 T 14-10-2018 BJD94_16590 7b7e99ec107f88ae2f934805546843c6 511 SUPERFAMILY SSF58104 202 510 1.31E-63 T 14-10-2018 BJD94_16335 30460b0a0f8ae1ba602a6c7a37473b76 204 Pfam PF01810 LysE type translocator 15 202 5.7E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_16335 30460b0a0f8ae1ba602a6c7a37473b76 204 PIRSF PIRSF006324 1 204 2.1E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_06155 ddb8982e25f5756dd59783e7caec56f8 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.8E-64 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BJD94_06155 ddb8982e25f5756dd59783e7caec56f8 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.385 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BJD94_06155 ddb8982e25f5756dd59783e7caec56f8 211 Pfam PF04205 FMN-binding domain 100 188 2.3E-18 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_06155 ddb8982e25f5756dd59783e7caec56f8 211 SMART SM00900 100 192 1.1E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_06155 ddb8982e25f5756dd59783e7caec56f8 211 PIRSF PIRSF006091 1 205 9.4E-79 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.2E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.9E-126 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.8E-258 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00745 afb61ce85c95e838789cee1326f9f889 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_18905 56f3e481d8640c14873b22e946c61cd4 226 Pfam PF00027 Cyclic nucleotide-binding domain 36 112 6.1E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_18905 56f3e481d8640c14873b22e946c61cd4 226 Gene3D G3DSA:2.60.120.10 18 145 1.5E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18905 56f3e481d8640c14873b22e946c61cd4 226 SUPERFAMILY SSF51206 18 142 4.45E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 SUPERFAMILY SSF55021 415 508 1.95E-26 T 14-10-2018 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 SUPERFAMILY SSF55021 332 418 5.8E-27 T 14-10-2018 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Gene3D G3DSA:3.40.1020.10 333 509 6.1E-71 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 1.4E-251 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 SUPERFAMILY SSF53686 10 360 3.93E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 508 1.0E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 5.5E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Gene3D G3DSA:3.40.50.1100 56 152 4.6E-135 T 14-10-2018 BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 6.6E-84 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_11035 0828bf8e0c8c43e4e0897990cf3ef947 509 Gene3D G3DSA:3.40.50.1100 20 322 4.6E-135 T 14-10-2018 BJD94_12885 75e800e15f87659e2e0dc87b77d2b72f 149 Pfam PF01475 Ferric uptake regulator family 20 138 4.5E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BJD94_12885 75e800e15f87659e2e0dc87b77d2b72f 149 SUPERFAMILY SSF46785 11 144 2.9E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_12885 75e800e15f87659e2e0dc87b77d2b72f 149 Gene3D G3DSA:3.30.1490.190 91 149 9.3E-16 T 14-10-2018 BJD94_12885 75e800e15f87659e2e0dc87b77d2b72f 149 Gene3D G3DSA:1.10.10.10 2 89 2.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 212 24.786 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 227 493 22.42 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 SUPERFAMILY SSF64153 7 249 4.45E-65 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 432 442 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Pfam PF01256 Carbohydrate kinase 250 489 4.5E-60 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Gene3D G3DSA:3.40.50.10260 3 217 6.3E-63 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 211 4.3E-53 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Pfam PF03853 YjeF-related protein N-terminus 30 191 5.8E-47 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 SUPERFAMILY SSF53613 225 493 1.1E-78 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 Gene3D G3DSA:3.40.1190.20 221 494 1.3E-87 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 PIRSF PIRSF017184 5 495 5.2E-143 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 BJD94_16045 7fe419a0c08e14df10dd19846e1d349a 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 493 6.2E-70 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.0E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Gene3D G3DSA:3.40.630.30 463 604 4.5E-24 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 SUPERFAMILY SSF55729 461 588 4.79E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Pfam PF00206 Lyase 6 301 1.5E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.384 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 6.8E-202 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Gene3D G3DSA:1.10.275.10 1 107 1.5E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 SUPERFAMILY SSF48557 3 456 2.67E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Pfam PF00583 Acetyltransferase (GNAT) family 498 572 2.2E-7 T 14-10-2018 IPR000182 GNAT domain BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Gene3D G3DSA:1.20.200.10 108 446 2.8E-147 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 Gene3D G3DSA:1.10.40.30 363 433 2.8E-147 T 14-10-2018 BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12760 19c7b55befb5a1edf04e54229a1fb8af 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Pfam PF13437 HlyD family secretion protein 155 261 1.1E-6 T 14-10-2018 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 350 5.1E-54 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Pfam PF13533 Biotin-lipoyl like 57 104 1.3E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 SUPERFAMILY SSF111369 46 269 7.32E-24 T 14-10-2018 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Gene3D G3DSA:2.40.50.100 57 189 4.0E-60 T 14-10-2018 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Gene3D G3DSA:2.40.420.20 272 348 4.0E-60 T 14-10-2018 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Gene3D G3DSA:2.40.30.170 43 271 4.0E-60 T 14-10-2018 BJD94_21160 403938ef0c1b90ac118cf0b8b8187768 356 Gene3D G3DSA:1.10.287.470 91 149 4.0E-60 T 14-10-2018 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SMART SM00316 133 198 4.1E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.0E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.8E-8 T 14-10-2018 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF54814 279 343 3.66E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:3.30.300.20 278 345 7.2E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.618 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF50249 132 199 1.2E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Pfam PF08529 NusA N-terminal domain 4 123 7.8E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:1.10.150.20 431 490 2.8E-24 T 14-10-2018 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF54814 201 278 1.24E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:3.30.1480.10 1 129 9.3E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Pfam PF13184 NusA-like KH domain 230 297 4.9E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:2.40.50.140 135 198 4.4E-17 T 14-10-2018 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF47794 429 492 3.61E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF69705 1 126 2.35E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 Gene3D G3DSA:1.10.150.20 352 421 7.2E-30 T 14-10-2018 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 SUPERFAMILY SSF47794 356 415 8.79E-17 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BJD94_14320 60b87a8308b45bb981fad32d5ee7a726 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.9E-123 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 6.9E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 Gene3D G3DSA:3.30.700.10 33 141 2.9E-45 T 14-10-2018 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 3.4E-43 T 14-10-2018 IPR013545 Type II secretion system protein G BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 142 4.3E-58 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 SUPERFAMILY SSF54523 36 142 1.94E-38 T 14-10-2018 BJD94_10465 5a802851f90f98dc163973cd49378ee6 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.5E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SUPERFAMILY SSF50341 555 687 4.05E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Gene3D G3DSA:2.40.50.180 579 642 1.4E-37 T 14-10-2018 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Pfam PF01584 CheW-like domain 563 688 3.0E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SMART SM00387 412 556 5.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Gene3D G3DSA:1.10.287.560 305 367 5.0E-17 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SUPERFAMILY SSF47226 4 128 5.1E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SUPERFAMILY SSF55874 371 554 8.51E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 306 367 7.3E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SUPERFAMILY SSF47384 306 368 2.24E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Gene3D G3DSA:2.30.30.40 556 683 1.4E-37 T 14-10-2018 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Pfam PF01627 Hpt domain 7 96 1.4E-16 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SMART SM00073 5 102 1.4E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SMART SM01231 304 367 4.1E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 555 3.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Gene3D G3DSA:1.20.120.160 1 142 1.8E-34 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 Gene3D G3DSA:3.30.565.10 368 555 1.4E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17940 5e16b0f2b90e2534f9fad1aa8f1336c5 704 SMART SM00260 548 687 1.1E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_18155 7d6c8288d7a107e4763a43192f180fed 169 Pfam PF11012 Protein of unknown function (DUF2850) 60 139 6.5E-32 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 Pfam PF02378 Phosphotransferase system, EIIC 290 565 5.6E-16 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 Gene3D G3DSA:3.40.50.2300 154 263 9.3E-40 T 14-10-2018 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 7.4E-85 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 SUPERFAMILY SSF52794 164 259 9.94E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 256 1.9E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 SUPERFAMILY SSF55804 1 146 9.29E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 2.4E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 130 2.4E-42 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 1.1E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_18785 00579c1e46ddcb74abe799dc6b6ca827 633 Gene3D G3DSA:3.40.930.10 1 147 1.2E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 SMART SM00347 23 124 3.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 SUPERFAMILY SSF46785 6 135 1.67E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 Pfam PF01047 MarR family 33 88 6.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14375 9f3e3792f5e1ec8011e468c695faa23f 137 Gene3D G3DSA:1.10.10.10 1 136 3.6E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_03745 32216a9a6c840f3d1a3022591911d1b5 470 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 435 2.0E-115 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_03745 32216a9a6c840f3d1a3022591911d1b5 470 PIRSF PIRSF006603 20 468 7.5E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_03745 32216a9a6c840f3d1a3022591911d1b5 470 Pfam PF01554 MatE 257 418 2.9E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_03745 32216a9a6c840f3d1a3022591911d1b5 470 Pfam PF01554 MatE 31 190 3.3E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_07140 f028fa486a129ac5c7c2ad42b015e78f 175 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 161 2.9E-30 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BJD94_07140 f028fa486a129ac5c7c2ad42b015e78f 175 SUPERFAMILY SSF56300 1 155 4.91E-33 T 14-10-2018 BJD94_07140 f028fa486a129ac5c7c2ad42b015e78f 175 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 154 1.9E-23 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BJD94_07140 f028fa486a129ac5c7c2ad42b015e78f 175 Gene3D G3DSA:3.60.21.10 1 174 5.0E-60 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_07310 0e802687e8853aa401b0a972872e2686 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD94_07310 0e802687e8853aa401b0a972872e2686 275 SUPERFAMILY SSF53335 76 269 1.74E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_07310 0e802687e8853aa401b0a972872e2686 275 SMART SM00138 8 272 1.4E-133 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BJD94_07310 0e802687e8853aa401b0a972872e2686 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 14-10-2018 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 Gene3D G3DSA:3.40.50.150 75 274 1.8E-59 T 14-10-2018 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.9E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_07310 0e802687e8853aa401b0a972872e2686 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD94_00425 7d91eb07808726554f86dee604b79d91 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 7.3E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BJD94_00425 7d91eb07808726554f86dee604b79d91 208 Gene3D G3DSA:3.40.50.2020 1 208 8.3E-73 T 14-10-2018 BJD94_00425 7d91eb07808726554f86dee604b79d91 208 SUPERFAMILY SSF53271 3 206 5.64E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_00425 7d91eb07808726554f86dee604b79d91 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.189 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BJD94_00425 7d91eb07808726554f86dee604b79d91 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.8E-64 T 14-10-2018 BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 Gene3D G3DSA:3.30.300.30 497 625 1.0E-25 T 14-10-2018 BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 1.9E-11 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.8E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 Gene3D G3DSA:3.40.50.12780 36 494 8.3E-100 T 14-10-2018 BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 SUPERFAMILY SSF56801 3 613 4.06E-153 T 14-10-2018 BJD94_04525 adb5000e9a6c244734920cb331dd9c12 625 Pfam PF00501 AMP-binding enzyme 65 501 7.1E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Pfam PF00905 Penicillin binding protein transpeptidase domain 452 690 1.1E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Gene3D G3DSA:1.10.3810.10 181 384 3.9E-261 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 PIRSF PIRSF002799 3 789 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 193 727 7.1E-155 T 14-10-2018 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 SUPERFAMILY SSF53955 186 382 2.81E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 SUPERFAMILY SSF56601 342 768 3.52E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Pfam PF14814 Bifunctional transglycosylase second domain 93 177 7.4E-26 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 48 768 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Gene3D G3DSA:3.40.710.10 83 740 3.9E-261 T 14-10-2018 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Gene3D G3DSA:3.30.2060.10 91 180 3.9E-261 T 14-10-2018 BJD94_14090 7c40c5e719cbee7c7e1e8f9666b52aca 789 Pfam PF00912 Transglycosylase 189 360 1.3E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.0E-122 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 SMART SM00382 50 247 5.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 Gene3D G3DSA:3.40.50.300 21 269 1.1E-64 T 14-10-2018 BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 SUPERFAMILY SSF52540 22 258 5.09E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08335 1c8ecbe63435a77c6cefb52b9f57c0d9 272 Pfam PF00005 ABC transporter 42 197 6.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_13295 35d42171d4df6bb10f8660988fb60853 443 PIRSF PIRSF006351 4 433 2.0E-148 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BJD94_13295 35d42171d4df6bb10f8660988fb60853 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 3.1E-114 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BJD94_13295 35d42171d4df6bb10f8660988fb60853 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 5.8E-66 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_17460 03a6210dc48dfb44fba83fe44ff95d79 255 SMART SM00382 26 214 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17460 03a6210dc48dfb44fba83fe44ff95d79 255 Gene3D G3DSA:3.40.50.300 3 253 2.8E-66 T 14-10-2018 BJD94_17460 03a6210dc48dfb44fba83fe44ff95d79 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_17460 03a6210dc48dfb44fba83fe44ff95d79 255 SUPERFAMILY SSF52540 6 231 7.24E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17460 03a6210dc48dfb44fba83fe44ff95d79 255 Pfam PF00005 ABC transporter 18 166 2.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 1.8E-50 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 Gene3D G3DSA:3.20.130.10 309 490 1.2E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.2E-61 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 PIRSF PIRSF001394 1 507 6.9E-213 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 SUPERFAMILY SSF117457 318 489 1.57E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.4E-97 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BJD94_02020 843d80439d9be84c005dc24d7831d4c7 507 Pfam PF05683 Fumarase C-terminus 289 490 1.2E-82 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Gene3D G3DSA:1.10.238.260 280 393 2.3E-32 T 14-10-2018 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 SUPERFAMILY SSF51569 1 291 1.34E-100 T 14-10-2018 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Gene3D G3DSA:3.20.20.70 1 277 6.2E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Pfam PF00682 HMGL-like 4 273 1.6E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.418 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.9E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 Gene3D G3DSA:3.30.160.270 394 500 2.9E-7 T 14-10-2018 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 SUPERFAMILY SSF110921 392 498 8.24E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 SMART SM00917 369 499 4.1E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 9.8E-238 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_09360 b8bf1143572c112586911ab1416dac36 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD94_20605 2a31f88815930f919d9c8b6cbf927e0a 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 3.2E-10 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BJD94_20605 2a31f88815930f919d9c8b6cbf927e0a 377 Gene3D G3DSA:3.60.21.10 1 265 1.2E-77 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_20605 2a31f88815930f919d9c8b6cbf927e0a 377 SUPERFAMILY SSF56300 1 320 2.25E-58 T 14-10-2018 BJD94_20605 2a31f88815930f919d9c8b6cbf927e0a 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 1.4E-53 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 BJD94_20605 2a31f88815930f919d9c8b6cbf927e0a 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.9E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Gene3D G3DSA:3.20.20.450 401 636 3.3E-40 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 SMART SM00052 403 635 1.1E-11 T 14-10-2018 IPR001633 EAL domain BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Pfam PF00563 EAL domain 411 635 4.3E-40 T 14-10-2018 IPR001633 EAL domain BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 9.5E-37 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 SMART SM00267 226 393 6.5E-13 T 14-10-2018 IPR000160 GGDEF domain BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Gene3D G3DSA:3.30.1040.50 102 151 4.3E-17 T 14-10-2018 BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 SUPERFAMILY SSF141868 411 636 2.75E-40 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 387 1.1E-13 T 14-10-2018 IPR000160 GGDEF domain BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 SUPERFAMILY SSF55073 243 391 5.81E-17 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_17780 2e54ae4dd348f4db456e1972d78e675f 637 Gene3D G3DSA:3.30.70.270 223 393 1.7E-21 T 14-10-2018 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Gene3D G3DSA:3.40.1190.10 97 304 1.6E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 441 32.588 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Pfam PF08245 Mur ligase middle domain 113 284 1.0E-27 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 SUPERFAMILY SSF53623 98 302 2.75E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Gene3D G3DSA:3.40.50.720 6 96 1.2E-19 T 14-10-2018 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 SUPERFAMILY SSF53244 304 441 2.7E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 SUPERFAMILY SSF51984 8 97 2.75E-17 T 14-10-2018 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 376 3.7E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 Gene3D G3DSA:3.90.190.20 305 438 3.6E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08900 31f510f8fd1630073860331fef77d4d1 442 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 439 7.9E-131 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 Gene3D G3DSA:3.50.80.20 86 178 1.0E-10 T 14-10-2018 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 353 367 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 417 430 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 279 301 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 338 352 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 456 4.5E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 SUPERFAMILY SSF56601 30 465 2.46E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 Gene3D G3DSA:3.40.710.10 239 469 7.0E-56 T 14-10-2018 BJD94_14250 31028c42ade9d819dbeeea0add7ee6eb 475 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 48 439 6.8E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_21040 b3a2be5f81b21dc694454fb8c46bd3a4 410 Pfam PF07690 Major Facilitator Superfamily 15 294 8.8E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_21040 b3a2be5f81b21dc694454fb8c46bd3a4 410 SUPERFAMILY SSF103473 9 399 1.01E-56 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_21040 b3a2be5f81b21dc694454fb8c46bd3a4 410 Gene3D G3DSA:1.20.1250.20 3 401 2.4E-56 T 14-10-2018 BJD94_03935 b0f211195fd27356beb4257e3cdf9477 245 Pfam PF02146 Sir2 family 13 186 2.4E-48 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 BJD94_03935 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.40.50.1220 8 225 1.1E-79 T 14-10-2018 BJD94_03935 b0f211195fd27356beb4257e3cdf9477 245 Gene3D G3DSA:3.30.1600.10 22 158 1.1E-79 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily BJD94_03935 b0f211195fd27356beb4257e3cdf9477 245 SUPERFAMILY SSF52467 6 235 1.16E-72 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_03935 b0f211195fd27356beb4257e3cdf9477 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.293 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 BJD94_01975 27a9e88eff792749a0374cb2a061df6c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD94_01975 27a9e88eff792749a0374cb2a061df6c 120 PIRSF PIRSF006113 1 120 2.9E-53 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD94_01975 27a9e88eff792749a0374cb2a061df6c 120 SUPERFAMILY SSF55620 2 118 5.56E-41 T 14-10-2018 BJD94_01975 27a9e88eff792749a0374cb2a061df6c 120 Gene3D G3DSA:3.30.479.10 1 120 8.8E-50 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BJD94_01975 27a9e88eff792749a0374cb2a061df6c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.7E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD94_09280 6a006e3dc3e437ef60dcc3b66cc1d2c6 468 Pfam PF13657 HipA N-terminal domain 7 106 1.1E-16 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 BJD94_09280 6a006e3dc3e437ef60dcc3b66cc1d2c6 468 Pfam PF07804 HipA-like C-terminal domain 145 418 7.4E-43 T 14-10-2018 IPR012893 HipA-like, C-terminal BJD94_09280 6a006e3dc3e437ef60dcc3b66cc1d2c6 468 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 25 105 1.9E-12 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 BJD94_17620 d0417cd398f2991d25704c3873982f9b 85 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 2.4E-44 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Gene3D G3DSA:1.10.1740.60 194 278 4.7E-39 T 14-10-2018 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Pfam PF01433 Peptidase family M1 domain 208 435 9.8E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 SUPERFAMILY SSF63737 2 192 3.53E-48 T 14-10-2018 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 9.6E-33 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Gene3D G3DSA:2.60.40.1730 15 193 1.1E-70 T 14-10-2018 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Gene3D G3DSA:1.25.50.10 545 867 2.7E-111 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily BJD94_04120 1ce805370acca4e5786e709cc667b603 869 SUPERFAMILY SSF55486 203 449 9.08E-74 T 14-10-2018 BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Gene3D G3DSA:1.10.390.10 279 442 4.7E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 549 867 5.9E-110 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal BJD94_04120 1ce805370acca4e5786e709cc667b603 869 Gene3D G3DSA:2.60.40.1840 443 544 5.5E-35 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily BJD94_10530 bcb57f75a02f72634499c474b8e32859 173 Pfam PF13521 AAA domain 4 164 9.6E-41 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain BJD94_10530 bcb57f75a02f72634499c474b8e32859 173 Gene3D G3DSA:3.40.50.300 3 168 1.0E-8 T 14-10-2018 BJD94_10530 bcb57f75a02f72634499c474b8e32859 173 SUPERFAMILY SSF52540 4 170 2.11E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02585 de9509aaeb469994439b13f8be311f4d 153 Pfam PF04191 Phospholipid methyltransferase 38 142 5.7E-13 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 BJD94_02585 de9509aaeb469994439b13f8be311f4d 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-20 T 14-10-2018 BJD94_02585 de9509aaeb469994439b13f8be311f4d 153 Gene3D G3DSA:1.20.120.1630 3 153 2.5E-22 T 14-10-2018 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 Gene3D G3DSA:1.10.275.10 16 152 9.4E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 SUPERFAMILY SSF48557 14 467 5.01E-143 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 5.6E-254 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 Gene3D G3DSA:1.10.40.30 421 470 4.3E-29 T 14-10-2018 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.9E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 Pfam PF00206 Lyase 23 355 8.3E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_12135 16cfcc3913e3822f141ad6ff96519700 483 Gene3D G3DSA:1.20.200.10 153 420 9.3E-113 T 14-10-2018 BJD94_13140 86e5ee71add0cc7f32546c80eb3ac445 296 Gene3D G3DSA:2.40.10.340 121 266 1.1E-35 T 14-10-2018 BJD94_13140 86e5ee71add0cc7f32546c80eb3ac445 296 PIRSF PIRSF038471 2 283 1.1E-79 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BJD94_13140 86e5ee71add0cc7f32546c80eb3ac445 296 Pfam PF04085 rod shape-determining protein MreC 123 269 6.7E-38 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BJD94_13140 86e5ee71add0cc7f32546c80eb3ac445 296 Gene3D G3DSA:2.40.10.350 180 257 1.1E-35 T 14-10-2018 BJD94_13140 86e5ee71add0cc7f32546c80eb3ac445 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 6.5E-89 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BJD94_01820 ff24e247202ef7806c8543bb2cce99cf 202 Pfam PF02810 SEC-C motif 184 202 2.8E-10 T 14-10-2018 IPR004027 SEC-C motif BJD94_01820 ff24e247202ef7806c8543bb2cce99cf 202 Gene3D G3DSA:3.10.450.50 154 202 1.4E-8 T 14-10-2018 BJD94_01820 ff24e247202ef7806c8543bb2cce99cf 202 SUPERFAMILY SSF103642 182 201 7.85E-7 T 14-10-2018 BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 SUPERFAMILY SSF53850 2 238 2.96E-37 T 14-10-2018 BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 SMART SM00267 289 453 1.3E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 SUPERFAMILY SSF55073 305 452 6.67E-37 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 Gene3D G3DSA:3.40.190.10 28 248 9.0E-36 T 14-10-2018 BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 SMART SM00062 31 248 1.6E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 Gene3D G3DSA:3.30.70.270 285 454 4.8E-40 T 14-10-2018 BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 236 1.2E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 301 449 1.5E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 452 5.1E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_15545 e870342b1788e16a5f08a441bbafd923 457 Gene3D G3DSA:3.40.190.10 116 212 9.0E-36 T 14-10-2018 BJD94_01105 a577d4b8559dd35e9e67f5b8a28ebec0 182 Gene3D G3DSA:3.40.630.30 1 178 9.8E-44 T 14-10-2018 BJD94_01105 a577d4b8559dd35e9e67f5b8a28ebec0 182 SUPERFAMILY SSF55729 3 177 1.83E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_01105 a577d4b8559dd35e9e67f5b8a28ebec0 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 5.0E-22 T 14-10-2018 IPR000182 GNAT domain BJD94_09520 96d20a94cf5b68b4866205d842c98474 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 4.8E-84 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 BJD94_09520 96d20a94cf5b68b4866205d842c98474 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 1.6E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BJD94_09520 96d20a94cf5b68b4866205d842c98474 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.0E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BJD94_09520 96d20a94cf5b68b4866205d842c98474 321 Gene3D G3DSA:1.20.1420.30 35 309 1.5E-87 T 14-10-2018 BJD94_09520 96d20a94cf5b68b4866205d842c98474 321 Gene3D G3DSA:1.20.58.1130 8 206 1.5E-87 T 14-10-2018 BJD94_21035 ea931b640d6ca83d2cda7bcb49621fa0 542 Pfam PF08774 VRR-NUC domain 433 535 8.1E-23 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 BJD94_21035 ea931b640d6ca83d2cda7bcb49621fa0 542 SMART SM00990 425 536 5.7E-26 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 BJD94_21035 ea931b640d6ca83d2cda7bcb49621fa0 542 Gene3D G3DSA:3.40.1350.10 467 541 5.3E-10 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 Pfam PF00815 Histidinol dehydrogenase 26 424 1.0E-170 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 6.6E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 Gene3D G3DSA:3.40.50.1980 30 229 3.5E-125 T 14-10-2018 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 Gene3D G3DSA:3.40.50.1980 231 346 3.5E-125 T 14-10-2018 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 4.6E-166 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 SUPERFAMILY SSF53720 3 424 2.55E-92 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 PIRSF PIRSF000099 1 427 4.1E-170 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_05385 8e352f582b69173143d4ee653e50123a 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.352 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD94_20610 d7c14bcf8e36fbbf248126ddd85126e8 1021 Pfam PF13558 Putative exonuclease SbcCD, C subunit 909 971 8.0E-12 T 14-10-2018 BJD94_20610 d7c14bcf8e36fbbf248126ddd85126e8 1021 Gene3D G3DSA:3.40.50.300 1 303 3.9E-41 T 14-10-2018 BJD94_20610 d7c14bcf8e36fbbf248126ddd85126e8 1021 Pfam PF13476 AAA domain 5 255 7.6E-22 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain BJD94_20610 d7c14bcf8e36fbbf248126ddd85126e8 1021 SUPERFAMILY SSF52540 647 1001 1.89E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20610 d7c14bcf8e36fbbf248126ddd85126e8 1021 SUPERFAMILY SSF52540 26 1000 2.97E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.1E-113 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Gene3D G3DSA:1.20.140.10 361 508 1.1E-97 T 14-10-2018 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.9E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 SUPERFAMILY SSF56645 122 356 3.01E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 SUPERFAMILY SSF47203 361 508 5.48E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 233 5.9E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Gene3D G3DSA:2.40.110.10 237 360 1.1E-97 T 14-10-2018 BJD94_00400 70ce19811c15f8baea8785f64eab442d 815 Gene3D G3DSA:1.10.540.10 123 236 1.1E-97 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD94_14670 d00f80035eeccb66f430860ba127e971 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.0E-29 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BJD94_14670 d00f80035eeccb66f430860ba127e971 110 SUPERFAMILY SSF50249 8 109 6.61E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_14670 d00f80035eeccb66f430860ba127e971 110 Gene3D G3DSA:2.40.50.140 1 110 7.9E-38 T 14-10-2018 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 Gene3D G3DSA:3.90.1030.10 1 117 4.2E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 SUPERFAMILY SSF64263 1 119 5.49E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09750 2c0e7dac255f2aacd460d6fb3c02319c 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.7E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_03900 e82cca68506f08ace0588523c8ff85d4 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_03900 e82cca68506f08ace0588523c8ff85d4 202 Gene3D G3DSA:3.30.70.20 5 181 1.3E-33 T 14-10-2018 BJD94_03900 e82cca68506f08ace0588523c8ff85d4 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 9.7E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_03900 e82cca68506f08ace0588523c8ff85d4 202 Gene3D G3DSA:3.30.70.20 63 120 1.3E-33 T 14-10-2018 BJD94_03900 e82cca68506f08ace0588523c8ff85d4 202 SUPERFAMILY SSF54862 1 183 3.24E-48 T 14-10-2018 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 5.3E-62 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.3E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.6E-125 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF52374 340 471 2.61E-23 T 14-10-2018 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.4E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.50.620 324 474 2.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF53613 12 304 5.61E-58 T 14-10-2018 IPR029056 Ribokinase-like BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.1190.20 6 310 7.2E-112 T 14-10-2018 IPR029056 Ribokinase-like BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.696 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD94_09055 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 Gene3D G3DSA:1.20.1090.10 185 382 6.8E-79 T 14-10-2018 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 SUPERFAMILY SSF56796 5 381 3.79E-138 T 14-10-2018 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 Gene3D G3DSA:3.40.50.1970 2 183 5.3E-58 T 14-10-2018 BJD94_20375 065c2eb3f5cc65dd92ea39f2b39fac00 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 4.7E-129 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BJD94_03305 8cc40cdb8497db9e6c30bd4da4d04269 122 Gene3D G3DSA:3.10.180.10 1 122 9.3E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03305 8cc40cdb8497db9e6c30bd4da4d04269 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 2.4E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_03305 8cc40cdb8497db9e6c30bd4da4d04269 122 SUPERFAMILY SSF54593 3 121 4.26E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_17845 4cf6174800dc96f8b86bdbf7b9e8af3b 486 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_17845 4cf6174800dc96f8b86bdbf7b9e8af3b 486 Pfam PF00367 phosphotransferase system, EIIB 11 40 1.9E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_17845 4cf6174800dc96f8b86bdbf7b9e8af3b 486 Gene3D G3DSA:3.30.1360.60 2 79 3.0E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_17845 4cf6174800dc96f8b86bdbf7b9e8af3b 486 Pfam PF02378 Phosphotransferase system, EIIC 132 413 2.7E-32 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_17845 4cf6174800dc96f8b86bdbf7b9e8af3b 486 SUPERFAMILY SSF55604 8 80 6.54E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.8E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 SUPERFAMILY SSF81665 251 765 4.84E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 SUPERFAMILY SSF81653 318 402 2.09E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.0E-27 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 SUPERFAMILY SSF56784 500 781 2.28E-48 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 1.1E-153 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 274 785 1.1E-123 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.2E-5 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.2E-5 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.2E-5 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.2E-5 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Gene3D G3DSA:3.30.70.100 90 173 2.6E-13 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Gene3D G3DSA:2.70.150.20 292 407 5.5E-32 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 1.8E-29 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 3.7E-24 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 3.7E-24 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 3.7E-24 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 3.7E-24 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 3.7E-24 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 SUPERFAMILY SSF55008 84 162 2.62E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 2.6E-73 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Pfam PF00403 Heavy-metal-associated domain 96 154 2.0E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Gene3D G3DSA:3.40.1110.10 511 614 2.1E-67 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Gene3D G3DSA:3.40.50.1000 482 719 2.1E-67 T 14-10-2018 IPR023214 HAD superfamily BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 Pfam PF00122 E1-E2 ATPase 318 478 7.1E-45 T 14-10-2018 BJD94_04005 811197c314b25eb5fce3ee51c3dc45b4 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 SUPERFAMILY SSF53850 88 299 4.07E-41 T 14-10-2018 BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 Pfam PF03466 LysR substrate binding domain 86 295 5.2E-40 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 Gene3D G3DSA:1.10.10.10 2 86 3.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 SUPERFAMILY SSF46785 3 110 1.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 Gene3D G3DSA:3.40.190.10 161 262 2.9E-61 T 14-10-2018 BJD94_21075 3eb4a9fb9ec17db8f256a6cf0663ed04 305 Gene3D G3DSA:3.40.190.10 90 292 2.9E-61 T 14-10-2018 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 177 2.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 SUPERFAMILY SSF55785 5 109 2.47E-7 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Gene3D G3DSA:3.30.565.10 179 336 3.5E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Gene3D G3DSA:3.30.450.20 1 100 2.2E-24 T 14-10-2018 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 335 5.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_10550 d542df752db837fe1bd644e1db05679f 336 SUPERFAMILY SSF47384 113 178 1.49E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 SMART SM00388 117 182 2.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Gene3D G3DSA:1.10.287.130 101 178 1.1E-13 T 14-10-2018 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 Pfam PF00989 PAS fold 3 97 1.7E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_10550 d542df752db837fe1bd644e1db05679f 336 SUPERFAMILY SSF55874 184 335 3.41E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_10550 d542df752db837fe1bd644e1db05679f 336 SMART SM00387 221 336 7.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 SUPERFAMILY SSF53720 14 497 1.13E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.3E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 Gene3D G3DSA:3.40.605.10 11 269 1.2E-89 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 Gene3D G3DSA:3.40.309.10 270 501 1.8E-75 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_16780 b8bfed0cbd464fb0d70f88b5983c5111 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82866 290 489 7.85E-47 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82693 136 323 1.44E-21 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.70.1320 134 325 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:1.20.1640.10 10 500 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82693 553 650 8.89E-22 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.2090.10 698 786 1.2E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 9.1E-278 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82866 782 1008 1.96E-46 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.70.1430 40 794 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.70.1430 555 647 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:1.20.1640.10 501 1001 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82693 41 130 2.25E-23 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.2090.10 178 268 1.2E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 Gene3D G3DSA:3.30.70.1440 648 843 1.2E-288 T 14-10-2018 BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82714 701 783 1.96E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_11330 f3ec270275e6ef9936224f5a89e35a9b 1039 SUPERFAMILY SSF82714 182 263 4.71E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_00075 e1da92e461c3447cc08bef546bf081be 446 Pfam PF11973 NQRA C-terminal domain 261 310 5.2E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 BJD94_00075 e1da92e461c3447cc08bef546bf081be 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.7E-114 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BJD94_00075 e1da92e461c3447cc08bef546bf081be 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.149 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BJD94_00075 e1da92e461c3447cc08bef546bf081be 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 1.7E-204 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 Pfam PF00312 Ribosomal protein S15 8 88 4.0E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.7E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 SMART SM01387 8 88 5.8E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 SUPERFAMILY SSF47060 3 89 1.35E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding BJD94_14340 a0606f8e5638701e386610cb7016c917 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-30 T 14-10-2018 BJD94_14340 a0606f8e5638701e386610cb7016c917 89 Gene3D G3DSA:1.10.287.10 2 89 4.0E-35 T 14-10-2018 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 6.8E-176 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 Gene3D G3DSA:3.90.1150.10 21 403 5.2E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 PIRSF PIRSF000412 3 431 3.1E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 Gene3D G3DSA:3.40.640.10 47 298 5.2E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 SUPERFAMILY SSF53383 8 430 2.92E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_21130 a23556f9765479dd45d011d222f440b8 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_21130 a23556f9765479dd45d011d222f440b8 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.498 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SMART SM00267 192 363 1.2E-6 T 14-10-2018 IPR000160 GGDEF domain BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SUPERFAMILY SSF55073 209 362 7.38E-16 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 Gene3D G3DSA:3.20.20.450 377 626 2.8E-87 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SUPERFAMILY SSF141868 378 629 2.22E-82 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 358 7.7E-14 T 14-10-2018 IPR000160 GGDEF domain BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SMART SM00052 373 618 2.3E-102 T 14-10-2018 IPR001633 EAL domain BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SMART SM00065 14 159 1.8E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 SUPERFAMILY SSF55781 16 163 2.98E-19 T 14-10-2018 BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 Pfam PF00563 EAL domain 381 613 8.6E-69 T 14-10-2018 IPR001633 EAL domain BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 Gene3D G3DSA:3.30.70.270 198 376 1.1E-17 T 14-10-2018 BJD94_21455 ef0981f0041f34794e97ceec02de7b78 638 Gene3D G3DSA:3.30.450.40 12 172 1.8E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Pfam PF00258 Flavodoxin 82 206 4.2E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Pfam PF00667 FAD binding domain 250 441 8.7E-26 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Gene3D G3DSA:1.20.990.10 297 401 1.4E-70 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PIRSF PIRSF000207 13 616 3.8E-268 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 SUPERFAMILY SSF52343 461 616 7.07E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 297 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 436 445 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 403 410 5.1E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Gene3D G3DSA:3.40.50.360 71 233 6.5E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 SUPERFAMILY SSF52218 79 226 1.46E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 21 616 2.0E-252 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Gene3D G3DSA:3.40.50.80 462 616 8.8E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 13 616 49.777 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Pfam PF00175 Oxidoreductase NAD-binding domain 474 580 2.2E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 Gene3D G3DSA:2.40.30.10 249 456 1.4E-70 T 14-10-2018 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 SUPERFAMILY SSF63380 247 462 4.54E-60 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00369 Flavodoxin signature 81 94 1.1E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00369 Flavodoxin signature 185 204 1.1E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00369 Flavodoxin signature 129 140 1.1E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD94_12910 d16f7eeac29059edf2b11433ebe4cf9d 616 PRINTS PR00369 Flavodoxin signature 161 171 1.1E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 SUPERFAMILY SSF52540 1 238 7.19E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 Pfam PF00005 ABC transporter 17 168 5.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 Gene3D G3DSA:3.40.50.300 1 244 8.4E-78 T 14-10-2018 BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 SMART SM00382 26 216 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11155 04c40cb01c04716b685647940cfc15a2 245 PIRSF PIRSF039085 1 244 4.6E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BJD94_06720 9f49654d3222e728ab0a7625230525a1 249 Pfam PF01553 Acyltransferase 70 188 1.2E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_06720 9f49654d3222e728ab0a7625230525a1 249 SMART SM00563 83 193 1.8E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_06720 9f49654d3222e728ab0a7625230525a1 249 SUPERFAMILY SSF69593 48 202 2.22E-24 T 14-10-2018 BJD94_11245 702bd5d09d5117c2a68158551595963e 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 5.4E-137 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI BJD94_11245 702bd5d09d5117c2a68158551595963e 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 8.7E-10 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD94_11245 702bd5d09d5117c2a68158551595963e 326 Gene3D G3DSA:3.90.180.10 17 325 1.9E-121 T 14-10-2018 BJD94_11245 702bd5d09d5117c2a68158551595963e 326 SUPERFAMILY SSF50129 2 145 9.89E-44 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_11245 702bd5d09d5117c2a68158551595963e 326 Gene3D G3DSA:3.40.50.720 126 294 1.9E-121 T 14-10-2018 BJD94_11245 702bd5d09d5117c2a68158551595963e 326 SMART SM00829 13 324 5.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_11245 702bd5d09d5117c2a68158551595963e 326 SUPERFAMILY SSF51735 116 289 2.31E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11245 702bd5d09d5117c2a68158551595963e 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.9E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 Pfam PF12833 Helix-turn-helix domain 182 260 3.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 Gene3D G3DSA:1.10.10.60 156 261 6.8E-23 T 14-10-2018 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 6.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 SMART SM00342 176 258 3.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 SUPERFAMILY SSF51182 16 185 3.11E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_19830 fa1fd67016d8f92668c5feee9a62b473 262 SUPERFAMILY SSF46689 213 260 3.48E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 154 340 4.66E-51 T 14-10-2018 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 Pfam PF06723 MreB/Mbl protein 11 338 1.6E-149 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 14 331 3.6E-132 T 14-10-2018 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.30.420.40 158 321 3.6E-132 T 14-10-2018 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 Gene3D G3DSA:3.90.640.10 190 263 3.6E-132 T 14-10-2018 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.8E-166 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD94_13135 4eb9e67d5037f0fc6054df2a45a62157 347 SUPERFAMILY SSF53067 9 152 2.71E-37 T 14-10-2018 BJD94_20440 d13223f57fc3096140745f4a686b7e0f 126 Gene3D G3DSA:3.40.50.10600 1 125 2.9E-42 T 14-10-2018 IPR038396 SpoIIAA-like superfamily BJD94_20440 d13223f57fc3096140745f4a686b7e0f 126 Pfam PF11964 SpoIIAA-like 20 124 3.4E-17 T 14-10-2018 IPR021866 SpoIIAA-like BJD94_20440 d13223f57fc3096140745f4a686b7e0f 126 SUPERFAMILY SSF52091 4 125 2.59E-37 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_12410 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 141 162 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_12410 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 94 116 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_12410 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 197 220 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_12410 8df298d839681030beb360542fb55ec1 399 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.9E-124 T 14-10-2018 IPR010201 HflK GO:0016021 BJD94_12410 8df298d839681030beb360542fb55ec1 399 Pfam PF01145 SPFH domain / Band 7 family 91 262 2.0E-31 T 14-10-2018 IPR001107 Band 7 domain BJD94_12410 8df298d839681030beb360542fb55ec1 399 Pfam PF12221 Bacterial membrane protein N terminal 1 58 7.4E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal BJD94_12410 8df298d839681030beb360542fb55ec1 399 SMART SM00244 87 247 1.9E-52 T 14-10-2018 IPR001107 Band 7 domain BJD94_12410 8df298d839681030beb360542fb55ec1 399 Gene3D G3DSA:3.30.479.30 117 249 4.6E-22 T 14-10-2018 BJD94_12410 8df298d839681030beb360542fb55ec1 399 SUPERFAMILY SSF117892 120 252 8.5E-23 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SMART SM00982 1008 1108 5.4E-47 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 5.4E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SMART SM01058 479 576 1.6E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SMART SM00490 826 910 5.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 1.1E-45 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SMART SM00487 600 790 2.5E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.40.50.11180 26 335 3.7E-119 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.40.50.300 478 990 3.6E-235 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.30.2060.10 130 215 3.7E-119 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 5.1E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF52540 352 466 3.5E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Pfam PF03461 TRCF domain 1010 1101 1.9E-28 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF52540 782 990 5.59E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF143517 998 1146 5.36E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF141259 470 548 4.58E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Pfam PF00271 Helicase conserved C-terminal domain 806 909 4.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.40.50.11140 356 453 6.3E-34 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:3.40.50.300 542 781 3.6E-235 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF52540 11 340 1.27E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 SUPERFAMILY SSF52540 523 783 3.46E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Gene3D G3DSA:2.30.30.840 483 541 3.6E-235 T 14-10-2018 BJD94_01115 cf57716029c0ebb0f1835292c5522ad1 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1108 27.897 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BJD94_16520 c9d6319d224cfde0fb6c6f61513764a6 995 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 416 682 2.2E-13 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 BJD94_16520 c9d6319d224cfde0fb6c6f61513764a6 995 SUPERFAMILY SSF53649 414 687 3.4E-11 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 Gene3D G3DSA:3.40.50.40 210 337 3.4E-46 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 PIRSF PIRSF001220 1 335 3.0E-95 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 Gene3D G3DSA:3.40.50.1170 1 209 1.8E-92 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 Pfam PF00710 Asparaginase, N-terminal 5 191 1.3E-66 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 PIRSF PIRSF500176 2 333 6.9E-109 T 14-10-2018 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 SUPERFAMILY SSF53774 3 336 9.55E-114 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.9E-118 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 BJD94_06335 391079191c2322d5aee890d46d0b2713 337 SMART SM00870 5 324 2.5E-139 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD94_07440 3b788a6c8c95ad08891b0b35f300fafb 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.362 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_07440 3b788a6c8c95ad08891b0b35f300fafb 283 Gene3D G3DSA:3.20.20.70 1 283 6.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_07440 3b788a6c8c95ad08891b0b35f300fafb 283 Pfam PF00793 DAHP synthetase I family 10 275 1.2E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_07440 3b788a6c8c95ad08891b0b35f300fafb 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.2E-116 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_07440 3b788a6c8c95ad08891b0b35f300fafb 283 SUPERFAMILY SSF51569 2 278 1.47E-104 T 14-10-2018 BJD94_04805 452a7fe8a6ffa8756654f60b7f311ad0 412 Pfam PF13688 Metallo-peptidase family M12 52 214 5.0E-7 T 14-10-2018 BJD94_04805 452a7fe8a6ffa8756654f60b7f311ad0 412 SUPERFAMILY SSF55486 50 223 6.0E-7 T 14-10-2018 BJD94_04805 452a7fe8a6ffa8756654f60b7f311ad0 412 SUPERFAMILY SSF141072 252 349 6.67E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily BJD94_02895 3653da915cd53153a64ab0e492f55a0e 157 Gene3D G3DSA:3.40.630.30 15 137 2.5E-15 T 14-10-2018 BJD94_02895 3653da915cd53153a64ab0e492f55a0e 157 SUPERFAMILY SSF55729 17 137 2.06E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02895 3653da915cd53153a64ab0e492f55a0e 157 Pfam PF13673 Acetyltransferase (GNAT) domain 46 132 1.3E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_02855 3653da915cd53153a64ab0e492f55a0e 157 Gene3D G3DSA:3.40.630.30 15 137 2.5E-15 T 14-10-2018 BJD94_02855 3653da915cd53153a64ab0e492f55a0e 157 SUPERFAMILY SSF55729 17 137 2.06E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02855 3653da915cd53153a64ab0e492f55a0e 157 Pfam PF13673 Acetyltransferase (GNAT) domain 46 132 1.3E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_17220 71f05729a7d7763f3b432f8cbe802433 144 SUPERFAMILY SSF54637 6 136 3.25E-34 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_17220 71f05729a7d7763f3b432f8cbe802433 144 Pfam PF13279 Thioesterase-like superfamily 16 136 4.1E-22 T 14-10-2018 BJD94_17220 71f05729a7d7763f3b432f8cbe802433 144 Gene3D G3DSA:3.10.129.10 3 137 7.1E-41 T 14-10-2018 BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 SMART SM00382 33 230 6.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 Gene3D G3DSA:3.40.50.300 1 317 1.9E-95 T 14-10-2018 BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 SUPERFAMILY SSF52540 4 251 3.04E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.2E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 4.1E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_18540 cbcdd3c4d569133c1979a1b1a6581f09 317 Pfam PF00005 ABC transporter 24 180 7.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PIRSF PIRSF001480 8 402 9.7E-100 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 396 1.1E-92 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 SUPERFAMILY SSF51182 9 394 9.62E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 Gene3D G3DSA:2.60.120.10 313 394 4.9E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 Pfam PF01238 Phosphomannose isomerase type I 12 366 4.8E-82 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 Gene3D G3DSA:1.10.441.10 159 312 4.9E-128 T 14-10-2018 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15535 66e2e514e6ffaac3dd261d7b233533b8 402 Gene3D G3DSA:2.60.120.10 16 287 4.9E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Gene3D G3DSA:3.30.360.10 625 795 6.3E-120 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.4E-129 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Gene3D G3DSA:3.30.2130.10 302 464 5.1E-44 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 SUPERFAMILY SSF55021 303 381 2.69E-21 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 SUPERFAMILY SSF55347 614 797 2.03E-50 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 SUPERFAMILY SSF51735 463 636 1.58E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.6E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Pfam PF00696 Amino acid kinase family 2 284 1.3E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Gene3D G3DSA:3.40.50.720 467 811 6.3E-120 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Gene3D G3DSA:3.40.1160.10 3 295 1.4E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.9E-47 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 SUPERFAMILY SSF55021 383 476 1.66E-20 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Gene3D G3DSA:1.20.120.1320 41 142 1.4E-86 T 14-10-2018 BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 SUPERFAMILY SSF53633 1 298 3.45E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_08730 52fb7d1e135bd1e916f193e4e921c2c6 819 Pfam PF01842 ACT domain 324 378 2.7E-9 T 14-10-2018 IPR002912 ACT domain BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 Gene3D G3DSA:3.30.2350.20 18 337 5.1E-106 T 14-10-2018 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 7.7E-55 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 29.147 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 337 1.7E-20 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 6.3E-42 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 SUPERFAMILY SSF55120 7 339 1.44E-97 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13775 dd94e9f90a4d6d0898fcaf34aeed3844 347 Gene3D G3DSA:3.30.2340.10 170 302 5.1E-106 T 14-10-2018 BJD94_01980 598c9baa1f5f862bc948f17ff5fa0e56 155 Pfam PF00583 Acetyltransferase (GNAT) family 20 133 2.0E-8 T 14-10-2018 IPR000182 GNAT domain BJD94_01980 598c9baa1f5f862bc948f17ff5fa0e56 155 Gene3D G3DSA:3.40.630.30 2 151 2.4E-15 T 14-10-2018 BJD94_01980 598c9baa1f5f862bc948f17ff5fa0e56 155 SUPERFAMILY SSF55729 1 140 1.17E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_14830 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Gene3D G3DSA:1.20.1250.20 248 440 2.1E-9 T 14-10-2018 BJD94_14830 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Gene3D G3DSA:1.20.1250.20 12 223 1.1E-11 T 14-10-2018 BJD94_14830 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Pfam PF07690 Major Facilitator Superfamily 280 446 2.0E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_14830 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Pfam PF07690 Major Facilitator Superfamily 24 269 3.3E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_14830 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 SUPERFAMILY SSF103473 9 438 5.23E-39 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_00050 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Gene3D G3DSA:1.20.1250.20 248 440 2.1E-9 T 14-10-2018 BJD94_00050 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Gene3D G3DSA:1.20.1250.20 12 223 1.1E-11 T 14-10-2018 BJD94_00050 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Pfam PF07690 Major Facilitator Superfamily 280 446 2.0E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_00050 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 Pfam PF07690 Major Facilitator Superfamily 24 269 3.3E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_00050 f0b40cf25c6daf2a518a5fc38e1b4cf4 466 SUPERFAMILY SSF103473 9 438 5.23E-39 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 SMART SM00487 20 221 9.2E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 SUPERFAMILY SSF52540 73 358 1.78E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 Pfam PF00271 Helicase conserved C-terminal domain 232 338 5.9E-26 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 Pfam PF00270 DEAD/DEAH box helicase 25 194 8.7E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 Gene3D G3DSA:3.40.50.300 212 373 3.1E-44 T 14-10-2018 BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 SMART SM00490 257 338 1.6E-28 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_17250 8ebe4ff566863b037df4278a63d7e04e 398 Gene3D G3DSA:3.40.50.300 1 210 4.0E-75 T 14-10-2018 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 SUPERFAMILY SSF51419 48 281 4.06E-48 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 TIGRFAM TIGR00492 alr: alanine racemase 44 407 2.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 Pfam PF01168 Alanine racemase, N-terminal domain 48 271 9.8E-51 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 SMART SM01005 279 407 6.7E-41 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 Hamap MF_01201 Alanine racemase. 41 407 25.946 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 Gene3D G3DSA:3.20.20.10 50 267 1.3E-128 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 72 82 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 Pfam PF00842 Alanine racemase, C-terminal domain 280 406 6.7E-31 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 SUPERFAMILY SSF50621 272 407 5.93E-39 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 Gene3D G3DSA:2.40.37.10 44 403 1.3E-128 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 201 212 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 244 271 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 333 350 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 312 327 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 67 83 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 103 121 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15345 a10cca04e9e1c9934fde4fdf86ba0b94 408 PRINTS PR00992 Alanine racemase signature 165 177 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SMART SM00490 253 334 4.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.4E-252 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Pfam PF09382 RQC domain 409 517 8.6E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SMART SM00956 414 517 3.0E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SMART SM00487 25 221 3.0E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Gene3D G3DSA:3.40.50.300 213 408 2.8E-60 T 14-10-2018 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SUPERFAMILY SSF47819 534 608 5.23E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Pfam PF00570 HRDC domain 537 603 1.3E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SMART SM00341 533 611 2.9E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 5.0E-189 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Pfam PF16124 RecQ zinc-binding 346 407 8.7E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SUPERFAMILY SSF52540 17 203 1.13E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Gene3D G3DSA:1.10.150.80 526 609 4.7E-28 T 14-10-2018 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 SUPERFAMILY SSF52540 211 458 1.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Gene3D G3DSA:1.10.10.10 409 519 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Gene3D G3DSA:3.40.50.300 6 211 5.8E-82 T 14-10-2018 BJD94_10755 c2a40cfd6d70d19022ea9a40b921e832 611 Pfam PF00270 DEAD/DEAH box helicase 32 190 3.8E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_14860 6362a779be0f188faa355360b81c4816 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.5E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 BJD94_14860 6362a779be0f188faa355360b81c4816 414 PIRSF PIRSF016055 1 414 9.4E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_14860 6362a779be0f188faa355360b81c4816 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.469 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_14860 6362a779be0f188faa355360b81c4816 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.0E-205 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_00080 6362a779be0f188faa355360b81c4816 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.5E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 BJD94_00080 6362a779be0f188faa355360b81c4816 414 PIRSF PIRSF016055 1 414 9.4E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_00080 6362a779be0f188faa355360b81c4816 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.469 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_00080 6362a779be0f188faa355360b81c4816 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.0E-205 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF52172 981 1096 8.4E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 859 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 903 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 845 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 884 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF55874 725 904 5.5E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF00672 HAMP domain 353 389 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00387 783 906 5.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00448 1105 1219 4.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00448 1251 1365 6.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00448 983 1093 6.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 904 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF52172 1106 1222 1.57E-21 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:1.10.287.130 632 734 3.7E-23 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF13185 GAF domain 409 540 3.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:3.40.50.12740 1250 1370 1.1E-40 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:3.40.50.12740 983 1100 1.2E-28 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF158472 341 389 1.01E-9 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00388 668 736 1.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SMART SM00304 340 392 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:3.30.565.10 735 909 6.8E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF52172 1249 1369 4.41E-38 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF00072 Response regulator receiver domain 1108 1215 8.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF00072 Response regulator receiver domain 986 1092 6.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF00072 Response regulator receiver domain 1253 1365 3.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:3.40.50.2300 1101 1236 5.3E-23 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF47384 655 737 6.08E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF02743 Cache domain 41 302 2.3E-14 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 SUPERFAMILY SSF55781 381 541 7.46E-18 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:1.20.1480.50 300 395 2.2E-13 T 14-10-2018 BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Gene3D G3DSA:3.30.450.40 399 546 1.8E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_21845 130073f7ae28bfc1901a70846dd4d697 1370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 736 1.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.798 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 SMART SM01097 3 133 2.1E-93 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.3E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 SUPERFAMILY SSF52317 153 377 1.23E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.7E-149 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 Gene3D G3DSA:3.50.30.20 2 151 4.0E-62 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 Gene3D G3DSA:3.40.50.880 152 378 1.8E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 SUPERFAMILY SSF52021 4 142 9.68E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 14-10-2018 BJD94_08840 d2a75011a5d579ca99d3d2730d12d3ee 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.3E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 Gene3D G3DSA:1.20.120.530 85 227 1.1E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 SMART SM00895 92 219 3.2E-21 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 SUPERFAMILY SSF48008 88 225 3.66E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.5E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 Gene3D G3DSA:1.10.10.10 4 83 4.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 Pfam PF07729 FCD domain 92 217 4.8E-25 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 SUPERFAMILY SSF46785 17 110 1.65E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_04550 1ccc6d702d910010e80a248974d7382d 231 SMART SM00345 24 82 2.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 PIRSF PIRSF005902 1 265 8.1E-61 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 Pfam PF01026 TatD related DNase 4 262 5.9E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 SUPERFAMILY SSF51556 1 263 6.29E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 Gene3D G3DSA:3.20.20.140 1 264 1.5E-75 T 14-10-2018 BJD94_14435 e4861f27c5c145b8e212ad3b65caea3b 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 Pfam PF02313 Fumarate reductase subunit D 11 123 3.3E-43 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 PIRSF PIRSF000179 6 125 7.2E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 SUPERFAMILY SSF81343 7 125 1.36E-49 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 1.0E-59 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.313 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 BJD94_12220 eda16f25aae537a97a895f9068dc7af4 125 Gene3D G3DSA:1.20.1300.10 6 125 1.3E-43 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 Gene3D G3DSA:3.30.540.10 6 160 8.2E-46 T 14-10-2018 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 2.5E-105 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 Pfam PF00459 Inositol monophosphatase family 11 252 5.0E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 SUPERFAMILY SSF56655 7 272 1.96E-77 T 14-10-2018 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.228 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 Gene3D G3DSA:3.40.190.80 161 264 8.3E-26 T 14-10-2018 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 7.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 7.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 7.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 7.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_10425 423d562ff34749a5d0153031185e45d6 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 7.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 Pfam PF00155 Aminotransferase class I and II 146 458 1.7E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 SUPERFAMILY SSF53383 97 460 2.59E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 Gene3D G3DSA:3.40.640.10 145 361 3.3E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 Gene3D G3DSA:3.90.1150.10 116 459 3.3E-77 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 Gene3D G3DSA:1.10.10.10 9 76 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 SUPERFAMILY SSF46785 10 78 6.69E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_19025 96e7b631c76e58c44e9ff07497c47744 482 SMART SM00345 16 75 5.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_13595 64988a8721523ba729331b955ac05639 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.4E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD94_13595 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF75445 127 198 5.49E-24 T 14-10-2018 BJD94_13595 64988a8721523ba729331b955ac05639 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.919 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD94_13595 64988a8721523ba729331b955ac05639 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.3E-68 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD94_13595 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.40.50.1360 7 207 2.7E-81 T 14-10-2018 BJD94_13595 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF100950 1 146 1.49E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_13595 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.30.70.260 125 196 2.7E-81 T 14-10-2018 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.4E-116 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 Gene3D G3DSA:3.40.50.2000 8 160 1.0E-119 T 14-10-2018 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 SUPERFAMILY SSF53756 5 352 7.33E-124 T 14-10-2018 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 Gene3D G3DSA:3.40.50.2000 161 318 1.0E-119 T 14-10-2018 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.498 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 8.5E-33 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BJD94_08890 16bae8d80781922be635582a0d8bb1aa 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.7E-46 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 Pfam PF00672 HAMP domain 307 356 1.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 SMART SM00283 375 636 2.5E-85 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 Gene3D G3DSA:3.30.450.20 157 282 5.7E-23 T 14-10-2018 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 SMART SM00304 306 360 3.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 Gene3D G3DSA:1.10.287.950 305 637 4.0E-78 T 14-10-2018 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 603 2.0E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 Pfam PF02743 Cache domain 52 268 3.0E-12 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 531 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 500 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_19710 02c47004e362699b190d47e8d81f04c7 637 SUPERFAMILY SSF58104 328 637 9.55E-80 T 14-10-2018 BJD94_16795 f2264d1f4097ef7e649cff05ec22e672 318 Gene3D G3DSA:3.40.50.2300 122 263 2.3E-57 T 14-10-2018 BJD94_16795 f2264d1f4097ef7e649cff05ec22e672 318 SUPERFAMILY SSF53822 23 303 3.4E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_16795 f2264d1f4097ef7e649cff05ec22e672 318 Gene3D G3DSA:3.40.50.2300 28 280 2.3E-57 T 14-10-2018 BJD94_16795 f2264d1f4097ef7e649cff05ec22e672 318 Pfam PF13407 Periplasmic binding protein domain 24 280 1.9E-43 T 14-10-2018 IPR025997 Periplasmic binding protein BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Gene3D G3DSA:3.30.70.1400 61 144 5.9E-85 T 14-10-2018 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 SUPERFAMILY SSF101790 284 376 1.96E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Gene3D G3DSA:4.10.1250.10 238 286 1.1E-20 T 14-10-2018 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 11 371 1.7E-108 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Gene3D G3DSA:3.30.1360.120 12 236 5.9E-85 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 259 5.5E-88 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 PIRSF PIRSF006487 1 377 2.1E-80 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 367 1.1E-20 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 Gene3D G3DSA:2.40.30.110 289 366 1.4E-26 T 14-10-2018 BJD94_21140 34d730d0a0447019be6a8b0796be89c7 377 SUPERFAMILY SSF103025 11 286 8.63E-91 T 14-10-2018 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 SUPERFAMILY SSF53822 61 331 9.76E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 Gene3D G3DSA:1.10.260.40 1 59 2.3E-22 T 14-10-2018 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 Gene3D G3DSA:3.40.50.2300 160 289 1.2E-73 T 14-10-2018 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 SMART SM00354 1 71 9.8E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 Gene3D G3DSA:3.40.50.2300 62 306 1.2E-73 T 14-10-2018 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 Pfam PF13377 Periplasmic binding protein-like domain 169 328 2.7E-34 T 14-10-2018 BJD94_18555 c8246e84c9b4d8348643deb6fc49398e 336 SUPERFAMILY SSF47413 2 60 2.88E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_06645 d1ddbae9006f373785fe32c9b0690dca 332 PIRSF PIRSF006470 1 332 1.5E-121 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BJD94_06645 d1ddbae9006f373785fe32c9b0690dca 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.4E-104 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BJD94_06645 d1ddbae9006f373785fe32c9b0690dca 332 Gene3D G3DSA:3.40.190.170 27 328 3.4E-91 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BJD94_06645 d1ddbae9006f373785fe32c9b0690dca 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 6.6E-79 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SUPERFAMILY SSF50998 27 317 9.42E-44 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 Pfam PF13360 PQQ-like domain 171 286 4.4E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 Gene3D G3DSA:2.130.10.10 23 116 1.2E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SMART SM00320 25 62 470.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SMART SM00320 233 274 0.37 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SMART SM00320 192 230 0.029 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SMART SM00320 150 189 6.0E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 SMART SM00320 68 106 240.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 BJD94_12565 39348f2672310261ee8bed10f8d41aa8 326 Gene3D G3DSA:2.130.10.10 117 326 9.9E-36 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_17410 9127681847c5aace6cf5f79e57a76e1e 370 Gene3D G3DSA:3.60.60.10 23 369 2.8E-82 T 14-10-2018 BJD94_17410 9127681847c5aace6cf5f79e57a76e1e 370 SUPERFAMILY SSF56235 23 342 4.4E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_17410 9127681847c5aace6cf5f79e57a76e1e 370 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 23 322 1.7E-30 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal BJD94_21150 5aaa4395defdc9af038e4d37320835c7 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_21150 5aaa4395defdc9af038e4d37320835c7 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_21150 5aaa4395defdc9af038e4d37320835c7 241 Gene3D G3DSA:1.10.357.10 1 201 5.6E-24 T 14-10-2018 BJD94_21150 5aaa4395defdc9af038e4d37320835c7 241 SUPERFAMILY SSF46689 9 86 1.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21150 5aaa4395defdc9af038e4d37320835c7 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 3.2E-44 T 14-10-2018 IPR012660 Thioesterase, putative BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 Pfam PF00583 Acetyltransferase (GNAT) family 34 122 8.7E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 Gene3D G3DSA:3.40.630.30 3 145 6.4E-28 T 14-10-2018 BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 SUPERFAMILY SSF55729 2 148 5.23E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.8E-52 T 14-10-2018 IPR012660 Thioesterase, putative BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 Gene3D G3DSA:3.10.129.10 147 298 5.6E-46 T 14-10-2018 BJD94_10510 e2fd9e5ad0366f50cd61ad76e671d2bc 308 SUPERFAMILY SSF54637 154 296 7.07E-40 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SMART SM00387 459 602 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Pfam PF01584 CheW-like domain 608 737 4.4E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SUPERFAMILY SSF47384 356 415 5.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 6.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SMART SM00073 6 103 1.4E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Gene3D G3DSA:1.10.287.560 355 414 3.0E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Gene3D G3DSA:1.20.120.160 2 143 7.0E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Gene3D G3DSA:3.30.565.10 415 601 8.9E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SMART SM00260 594 735 5.1E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Gene3D G3DSA:2.40.50.180 625 690 2.0E-34 T 14-10-2018 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SUPERFAMILY SSF50341 601 735 1.44E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SMART SM01231 354 414 2.2E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Pfam PF01627 Hpt domain 8 99 3.5E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SUPERFAMILY SSF55874 417 600 1.57E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 SUPERFAMILY SSF47226 6 128 1.02E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Gene3D G3DSA:2.30.30.40 602 731 2.0E-34 T 14-10-2018 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 6.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 6.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 6.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 6.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00690 560402cc2bd9e667d05ba298ad944686 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 1.7E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD94_15970 953dfe1d01bb22c47770869c33d6ada6 207 SUPERFAMILY SSF51161 18 204 4.02E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_15970 953dfe1d01bb22c47770869c33d6ada6 207 Gene3D G3DSA:2.160.10.10 1 207 1.2E-75 T 14-10-2018 BJD94_15970 953dfe1d01bb22c47770869c33d6ada6 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.7E-10 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_15970 953dfe1d01bb22c47770869c33d6ada6 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 Pfam PF00664 ABC transporter transmembrane region 28 293 5.2E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 Gene3D G3DSA:1.20.1560.10 2 329 1.8E-81 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 Gene3D G3DSA:3.40.50.300 330 581 4.1E-96 T 14-10-2018 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 SUPERFAMILY SSF52540 334 580 2.19E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 SMART SM00382 368 555 4.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 SUPERFAMILY SSF90123 14 327 1.05E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 3.1E-241 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 BJD94_01150 bcb7e19065b975a6c26bf1dc20d69d44 583 Pfam PF00005 ABC transporter 359 509 1.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 SUPERFAMILY SSF52777 4 180 2.11E-20 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Pfam PF00501 AMP-binding enzyme 906 1297 1.4E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.30.559.30 186 445 3.7E-56 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.30.559.30 633 873 2.8E-34 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.40.50.12780 896 1290 3.6E-99 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 922 1321 5.7E-108 T 14-10-2018 IPR010071 Amino acid adenylation domain BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Pfam PF00668 Condensation domain 483 865 2.9E-15 T 14-10-2018 IPR001242 Condensation domain BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Pfam PF00668 Condensation domain 4 437 1.1E-29 T 14-10-2018 IPR001242 Condensation domain BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.30.300.30 1292 1402 8.0E-24 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1040 1051 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.30.559.10 2 182 7.1E-40 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Gene3D G3DSA:3.30.559.10 450 622 1.6E-23 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 SUPERFAMILY SSF52777 187 440 5.34E-31 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 SUPERFAMILY SSF52777 454 647 9.45E-11 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 SUPERFAMILY SSF56801 895 1392 3.92E-124 T 14-10-2018 BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 Pfam PF13193 AMP-binding enzyme C-terminal domain 1306 1380 2.9E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD94_16620 ce39fbf134270eae939c0415b6c4f2e5 1485 SUPERFAMILY SSF52777 635 869 5.34E-23 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 Gene3D G3DSA:3.30.870.10 33 242 2.0E-32 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 Pfam PF13091 PLD-like domain 296 429 8.2E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 Pfam PF13091 PLD-like domain 60 211 1.7E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 SUPERFAMILY SSF56024 290 435 1.12E-21 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 PIRSF PIRSF000850 30 120 0.51 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 PIRSF PIRSF000850 141 188 15.0 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 PIRSF PIRSF000850 291 438 0.0032 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 Gene3D G3DSA:3.30.870.10 282 460 4.7E-27 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 SUPERFAMILY SSF56024 40 218 1.43E-34 T 14-10-2018 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 SMART SM00155 378 405 9.0E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_16990 c843a49e0e1d6dbecb2564f5019741b0 483 SMART SM00155 152 179 1.0 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 1.2E-27 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.4E-96 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 2.6E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 Gene3D G3DSA:3.90.1170.20 21 293 1.1E-126 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 SUPERFAMILY SSF51690 130 294 6.67E-60 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 PIRSF PIRSF006250 16 295 3.0E-103 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 SUPERFAMILY SSF54675 14 128 1.22E-33 T 14-10-2018 BJD94_13990 9d7b3ec3e40285a8a2c9d86986b231b7 295 Gene3D G3DSA:3.20.20.70 138 284 1.1E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 Gene3D G3DSA:1.20.58.340 252 309 3.6E-9 T 14-10-2018 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 Gene3D G3DSA:1.20.58.340 125 249 2.5E-24 T 14-10-2018 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 SUPERFAMILY SSF143865 22 235 5.49E-30 T 14-10-2018 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 Gene3D G3DSA:3.30.460.20 1 124 7.9E-43 T 14-10-2018 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 Pfam PF01544 CorA-like Mg2+ transporter protein 28 305 1.1E-41 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BJD94_14695 696508f0209238d5ccc01e990d24160c 309 SUPERFAMILY SSF144083 246 306 2.62E-12 T 14-10-2018 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.5E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.5E-40 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 Gene3D G3DSA:1.20.810.10 1 421 1.6E-149 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 6 296 5.97E-92 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 PIRSF PIRSF038885 1 421 1.5E-151 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 BJD94_08980 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81648 297 411 2.62E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.170.230.10 155 231 7.0E-75 T 14-10-2018 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 SUPERFAMILY SSF51306 78 298 3.56E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF00717 Peptidase S24-like 86 166 1.8E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.10.109.10 78 272 7.0E-75 T 14-10-2018 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF10502 Signal peptidase, peptidase S26 209 269 1.8E-8 T 14-10-2018 IPR019533 Peptidase S26 BJD94_13685 d2ce172a74c15c2121baa886d3ca5604 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.0E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Pfam PF11808 Domain of unknown function (DUF3329) 1 82 5.2E-29 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 262 1.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SUPERFAMILY SSF55874 252 418 2.1E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Gene3D G3DSA:1.10.287.130 192 266 1.1E-20 T 14-10-2018 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Gene3D G3DSA:3.30.565.10 272 421 1.0E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SMART SM00387 308 420 1.1E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SUPERFAMILY SSF47384 183 263 1.28E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SMART SM00388 196 263 1.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 85 415 2.9E-138 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SUPERFAMILY SSF55785 77 188 1.03E-11 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 418 4.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Pfam PF00989 PAS fold 90 178 1.9E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 SMART SM00091 89 155 1.7E-5 T 14-10-2018 IPR000014 PAS domain BJD94_08365 65c69ab3dec504d5a586813ba124c933 423 Gene3D G3DSA:3.30.450.20 76 191 1.2E-9 T 14-10-2018 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 SUPERFAMILY SSF81324 22 235 4.19E-53 T 14-10-2018 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 120 146 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 178 200 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 58 81 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 207 233 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 16 44 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 84 104 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 PRINTS PR00169 Potassium channel signature 149 172 1.9E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 Pfam PF00520 Ion transport protein 24 235 2.6E-30 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BJD94_06230 2d3dc566244052d31dc5b0ff484d83ec 286 Gene3D G3DSA:1.10.287.70 23 236 1.3E-58 T 14-10-2018 BJD94_04955 51742da3457f025487d59d229c4ca02f 553 SUPERFAMILY SSF53383 27 527 3.36E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_04955 51742da3457f025487d59d229c4ca02f 553 Gene3D G3DSA:3.40.640.10 122 387 2.3E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_04955 51742da3457f025487d59d229c4ca02f 553 Gene3D G3DSA:3.90.1150.170 56 523 2.3E-110 T 14-10-2018 BJD94_04955 51742da3457f025487d59d229c4ca02f 553 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.5E-294 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD94_04955 51742da3457f025487d59d229c4ca02f 553 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 442 8.3E-56 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BJD94_15755 acce1eb3c1c794007ac3cebfa928970b 203 SUPERFAMILY SSF110111 57 174 4.32E-45 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15755 acce1eb3c1c794007ac3cebfa928970b 203 PIRSF PIRSF005413 1 193 6.5E-68 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15755 acce1eb3c1c794007ac3cebfa928970b 203 Gene3D G3DSA:2.60.370.10 57 188 6.3E-42 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15755 acce1eb3c1c794007ac3cebfa928970b 203 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 7.8E-48 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00448 3 116 1.0E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:3.40.50.2300 1 126 5.6E-39 T 14-10-2018 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.9E-113 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 SUPERFAMILY SSF52172 3 184 1.81E-43 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00862 150 225 2.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00072 Response regulator receiver domain 5 116 7.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08370 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:1.10.10.10 127 228 1.8E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 4.0E-224 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 Gene3D G3DSA:3.40.50.720 180 318 1.2E-152 T 14-10-2018 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 SUPERFAMILY SSF50129 324 375 3.95E-11 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 SMART SM00829 16 373 0.0036 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 SUPERFAMILY SSF50129 2 193 3.5E-72 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 SUPERFAMILY SSF51735 166 339 1.56E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 Pfam PF00107 Zinc-binding dehydrogenase 203 326 7.7E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 3.2E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD94_07940 5b9da38086952fb5c34a1985f8f037a4 376 Gene3D G3DSA:3.90.180.10 12 370 1.2E-152 T 14-10-2018 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 509 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 210 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 SUPERFAMILY SSF58104 337 646 2.09E-70 T 14-10-2018 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 SMART SM00283 384 645 2.1E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 612 1.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 Gene3D G3DSA:1.10.287.950 316 647 2.0E-69 T 14-10-2018 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 SMART SM00304 317 369 7.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_18335 ca5326832b149cf8a46e9ebdafc5100d 647 SMART SM01358 35 288 1.1E-39 T 14-10-2018 IPR032255 Helical bimodular sensor domain BJD94_16090 61fb8aa0665acde274895463b110a4ec 191 PIRSF PIRSF000013 1 191 9.1E-94 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 BJD94_16090 61fb8aa0665acde274895463b110a4ec 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 1.3E-70 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BJD94_16090 61fb8aa0665acde274895463b110a4ec 191 Gene3D G3DSA:1.10.3820.10 11 187 9.9E-34 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BJD94_16090 61fb8aa0665acde274895463b110a4ec 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 5.8E-95 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 BJD94_16090 61fb8aa0665acde274895463b110a4ec 191 SUPERFAMILY SSF48695 16 190 7.03E-56 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_20655 e56df38c24352c4521a6217d98831b05 421 Pfam PF00437 Type II/IV secretion system protein 71 347 4.7E-80 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_20655 e56df38c24352c4521a6217d98831b05 421 Gene3D G3DSA:3.30.450.380 1 166 2.9E-39 T 14-10-2018 BJD94_20655 e56df38c24352c4521a6217d98831b05 421 Gene3D G3DSA:3.40.50.300 168 408 9.2E-72 T 14-10-2018 BJD94_20655 e56df38c24352c4521a6217d98831b05 421 SUPERFAMILY SSF52540 56 358 4.93E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03985 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 158 309 2.26E-24 T 14-10-2018 BJD94_03985 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 4 158 4.19E-26 T 14-10-2018 BJD94_03985 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 4 148 6.0E-15 T 14-10-2018 IPR006016 UspA BJD94_03985 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 178 301 1.3E-15 T 14-10-2018 IPR006016 UspA BJD94_03985 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.12370 1 312 4.0E-114 T 14-10-2018 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Pfam PF08180 B melanoma antigen family 9 36 7.2E-13 T 14-10-2018 IPR012530 B melanoma antigen-like BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 1.6E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 SUPERFAMILY SSF50156 217 337 2.07E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Pfam PF03572 Peptidase family S41 356 525 1.5E-50 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Gene3D G3DSA:3.90.226.10 324 545 1.7E-57 T 14-10-2018 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 4.0E-112 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 7.0E-39 T 14-10-2018 IPR020992 Tail specific protease, C-terminal BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 SUPERFAMILY SSF52096 165 532 4.31E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 Gene3D G3DSA:2.30.42.10 236 320 4.2E-12 T 14-10-2018 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 SMART SM00245 326 527 4.5E-67 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD94_04130 02734ab101e3e6aba0f1fc625f599581 666 SMART SM00228 246 323 3.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 Gene3D G3DSA:1.10.287.950 215 546 9.9E-69 T 14-10-2018 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 SUPERFAMILY SSF58104 237 546 1.83E-70 T 14-10-2018 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 SMART SM01049 38 132 2.7E-44 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 Pfam PF08269 Cache domain 37 200 1.3E-45 T 14-10-2018 IPR004010 Double Cache domain 2 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 Pfam PF00672 HAMP domain 216 264 1.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 SMART SM00283 284 545 2.6E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 509 4.7E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 Gene3D G3DSA:3.30.450.20 37 192 1.5E-63 T 14-10-2018 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 341 8.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 8.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_12035 dcba60a5253cc8c2588ae6636c4bbe8b 546 SMART SM00304 215 269 1.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 SUPERFAMILY SSF64518 1 374 4.71E-78 T 14-10-2018 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Gene3D G3DSA:1.10.8.410 326 375 3.7E-14 T 14-10-2018 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Gene3D G3DSA:1.20.1330.10 43 325 2.6E-60 T 14-10-2018 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Pfam PF00700 Bacterial flagellin C-terminal helical region 290 374 7.6E-21 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.9E-34 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 PRINTS PR00207 Flagellin signature 75 94 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 PRINTS PR00207 Flagellin signature 36 53 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 PRINTS PR00207 Flagellin signature 110 133 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Gene3D G3DSA:3.30.70.2120 172 273 2.6E-60 T 14-10-2018 BJD94_07235 d72ceb3e7a3bfb375c368ebe4c647054 375 Pfam PF07196 Flagellin hook IN motif 194 243 1.6E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_14040 5f79acec867a342785adb37163ceca61 307 Pfam PF00005 ABC transporter 20 164 9.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_14040 5f79acec867a342785adb37163ceca61 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_14040 5f79acec867a342785adb37163ceca61 307 Gene3D G3DSA:3.40.50.300 1 235 1.4E-65 T 14-10-2018 BJD94_14040 5f79acec867a342785adb37163ceca61 307 SUPERFAMILY SSF52540 3 232 2.77E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14040 5f79acec867a342785adb37163ceca61 307 SMART SM00382 29 213 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17680 9697497f2aee5d4ea37f106a6ea0e553 708 Gene3D G3DSA:3.40.50.300 329 688 2.5E-8 T 14-10-2018 BJD94_17680 9697497f2aee5d4ea37f106a6ea0e553 708 Gene3D G3DSA:3.40.50.300 157 322 3.7E-10 T 14-10-2018 BJD94_17680 9697497f2aee5d4ea37f106a6ea0e553 708 Gene3D G3DSA:3.40.50.300 9 153 1.9E-15 T 14-10-2018 BJD94_17680 9697497f2aee5d4ea37f106a6ea0e553 708 Pfam PF00580 UvrD/REP helicase N-terminal domain 28 308 1.2E-15 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD94_17680 9697497f2aee5d4ea37f106a6ea0e553 708 SUPERFAMILY SSF52540 12 680 1.06E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 Pfam PF01266 FAD dependent oxidoreductase 11 359 1.8E-50 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 Gene3D G3DSA:3.30.9.10 86 318 3.1E-79 T 14-10-2018 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 SUPERFAMILY SSF54373 226 317 4.71E-12 T 14-10-2018 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 Gene3D G3DSA:1.10.10.1100 418 489 2.7E-20 T 14-10-2018 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 Gene3D G3DSA:3.50.50.60 11 366 3.1E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 SUPERFAMILY SSF51905 9 226 3.46E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 482 1.7E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_20335 fdec95c21627ccab76fdd912f1786206 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 537 8.6E-267 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BJD94_15955 0688bd69e450d6a034b8cc3db027e936 142 SUPERFAMILY SSF54593 5 130 3.16E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_15955 0688bd69e450d6a034b8cc3db027e936 142 Gene3D G3DSA:3.10.180.10 5 140 5.8E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_09605 650443f63940b4cb46152f35616c5a6a 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 6.9E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BJD94_09605 650443f63940b4cb46152f35616c5a6a 212 Pfam PF02441 Flavoprotein 6 182 1.7E-24 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BJD94_09605 650443f63940b4cb46152f35616c5a6a 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.806 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BJD94_09605 650443f63940b4cb46152f35616c5a6a 212 SUPERFAMILY SSF52507 6 202 7.33E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD94_09605 650443f63940b4cb46152f35616c5a6a 212 Gene3D G3DSA:3.40.50.1950 1 204 8.7E-77 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF03466 LysR substrate binding domain 111 285 4.6E-15 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF53850 96 289 3.26E-23 T 14-10-2018 BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:1.10.10.10 1 87 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF46785 1 85 1.77E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_15260 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:3.40.190.290 92 284 8.4E-35 T 14-10-2018 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 Gene3D G3DSA:3.30.450.20 31 202 4.5E-36 T 14-10-2018 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 SMART SM00304 222 276 6.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 SMART SM01049 44 130 2.3E-19 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 SUPERFAMILY SSF58104 244 553 7.59E-75 T 14-10-2018 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 516 9.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 Gene3D G3DSA:1.10.287.950 221 553 2.4E-70 T 14-10-2018 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 Pfam PF17200 Single Cache domain 2 48 187 1.0E-32 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 SMART SM00283 291 552 1.4E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 7.5E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18055 7cd39e56eea7a14b5a3db8f8b59a81de 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 7.5E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_08895 3c487f91f4248a6696c7abb40e903d86 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 379 4.2E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08895 3c487f91f4248a6696c7abb40e903d86 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08895 3c487f91f4248a6696c7abb40e903d86 397 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 21 389 41.579 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_08895 3c487f91f4248a6696c7abb40e903d86 397 Pfam PF01098 Cell cycle protein 26 380 5.3E-114 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_06600 291513ee541463de54e436d602b8bc25 97 SMART SM00411 8 97 4.3E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 SUPERFAMILY SSF47729 8 97 1.77E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 Gene3D G3DSA:4.10.520.10 8 97 7.1E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_06600 291513ee541463de54e436d602b8bc25 97 Pfam PF00216 Bacterial DNA-binding protein 8 97 3.1E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 Gene3D G3DSA:3.40.50.300 23 213 1.2E-69 T 14-10-2018 BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 41 213 2.7E-68 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 17 38 7.6E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 SUPERFAMILY SSF52540 24 213 2.34E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 PIRSF PIRSF015617 18 213 8.8E-65 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD94_05770 b6c5a763fba2b5ecba021df9a7053ce5 213 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 44 213 7.1E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 Gene3D G3DSA:1.10.1660.10 1 113 2.5E-24 T 14-10-2018 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 SUPERFAMILY SSF53335 134 388 7.6E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 SMART SM00422 2 70 1.2E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 Gene3D G3DSA:3.40.50.150 141 388 3.0E-56 T 14-10-2018 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 SUPERFAMILY SSF46955 2 102 9.16E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_10270 292caa46cdb685b2b739f9335dfdc837 390 Pfam PF13649 Methyltransferase domain 187 281 4.8E-16 T 14-10-2018 BJD94_15450 660113833416e9971af55739e1962f9b 269 SUPERFAMILY SSF52096 5 264 5.15E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_15450 660113833416e9971af55739e1962f9b 269 Gene3D G3DSA:1.10.12.10 206 268 1.4E-22 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BJD94_15450 660113833416e9971af55739e1962f9b 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 2.5E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD94_15450 660113833416e9971af55739e1962f9b 269 Gene3D G3DSA:3.90.226.10 4 205 1.6E-61 T 14-10-2018 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:3.40.50.300 177 456 1.3E-105 T 14-10-2018 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.6E-37 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 Gene3D G3DSA:1.10.860.10 12 176 7.7E-56 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.2E-176 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF48024 18 129 6.02E-39 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 2.0E-112 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BJD94_12855 302fc6bbfab974dd8fb40eabeeabc2b5 464 SUPERFAMILY SSF52540 197 448 1.24E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16310 945e85e096aaac3e1364c524d260b099 478 SUPERFAMILY SSF51735 128 304 5.07E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_16310 945e85e096aaac3e1364c524d260b099 478 Gene3D G3DSA:3.40.50.720 129 462 2.5E-115 T 14-10-2018 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 SMART SM00846 127 288 3.7E-52 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 Gene3D G3DSA:3.30.360.10 287 452 2.5E-115 T 14-10-2018 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 4.9E-47 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 SUPERFAMILY SSF55347 288 451 9.35E-55 T 14-10-2018 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.4E-21 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16310 945e85e096aaac3e1364c524d260b099 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 9.6E-114 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 SUPERFAMILY SSF63380 1 93 6.21E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 SUPERFAMILY SSF63380 93 198 4.85E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 Pfam PF00677 Lumazine binding domain 3 87 3.0E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 Pfam PF00677 Lumazine binding domain 100 185 2.0E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 PIRSF PIRSF000498 1 204 8.7E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 Gene3D G3DSA:2.40.30.20 1 89 1.1E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 2.2E-75 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_03750 cc96c486bcd77dcf16e59bdcafdb047f 206 Gene3D G3DSA:2.40.30.20 94 191 9.3E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 5.5E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 SUPERFAMILY SSF63848 113 218 5.36E-31 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.989 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 3.1E-77 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 Gene3D G3DSA:2.160.20.70 113 220 9.6E-32 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.9E-29 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BJD94_06840 2e8d92ec394e5f794fb130ab9e21dde8 220 Gene3D G3DSA:3.30.750.120 1 112 4.0E-31 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 8.8E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 Gene3D G3DSA:3.20.20.70 1 203 8.7E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 SUPERFAMILY SSF51569 3 201 1.5E-66 T 14-10-2018 BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_11465 8f53284b919eb1bc29a8a3fa8fe590b9 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.3E-72 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_21115 176c777d6f2f1fd5af328d728511db68 584 SUPERFAMILY SSF52540 1 354 2.67E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21115 176c777d6f2f1fd5af328d728511db68 584 Pfam PF13175 AAA ATPase domain 1 351 6.0E-25 T 14-10-2018 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 460 1.1E-134 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 363 385 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 426 446 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08115 c5fe4388ea7ac58340ff190a4100bd18 513 Pfam PF01235 Sodium:alanine symporter family 51 471 1.8E-149 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 556 1.3E-188 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 SUPERFAMILY SSF52540 321 554 7.05E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 Pfam PF00005 ABC transporter 348 493 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 Gene3D G3DSA:3.40.50.300 323 564 9.9E-69 T 14-10-2018 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 Gene3D G3DSA:1.20.1560.10 8 315 3.1E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 SUPERFAMILY SSF90123 14 312 2.75E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_19735 8d987f274a954217f522d117fe49cdf6 570 SMART SM00382 356 551 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08315 445b40aeef36a6caddbcbcf0c0492881 202 Gene3D G3DSA:3.40.30.10 1 197 2.2E-73 T 14-10-2018 BJD94_08315 445b40aeef36a6caddbcbcf0c0492881 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.1E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_08315 445b40aeef36a6caddbcbcf0c0492881 202 Pfam PF00578 AhpC/TSA family 4 139 2.8E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_08315 445b40aeef36a6caddbcbcf0c0492881 202 SUPERFAMILY SSF52833 1 194 6.3E-68 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_08315 445b40aeef36a6caddbcbcf0c0492881 202 PIRSF PIRSF000239 1 201 4.2E-60 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_10375 b7bb6c5e9814c315b743cc6617d3ad69 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BJD94_10375 b7bb6c5e9814c315b743cc6617d3ad69 467 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 6.1E-133 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 BJD94_10375 b7bb6c5e9814c315b743cc6617d3ad69 467 Pfam PF00860 Permease family 24 416 4.5E-98 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BJD94_10375 b7bb6c5e9814c315b743cc6617d3ad69 467 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 446 1.7E-126 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BJD94_15825 d8dc6ce84e3a9cd72d87345e04fe6bb0 325 SUPERFAMILY SSF56935 22 325 5.49E-48 T 14-10-2018 BJD94_15825 d8dc6ce84e3a9cd72d87345e04fe6bb0 325 Pfam PF13609 Gram-negative porin 7 301 4.5E-28 T 14-10-2018 BJD94_15825 d8dc6ce84e3a9cd72d87345e04fe6bb0 325 Gene3D G3DSA:2.40.160.10 22 325 2.6E-53 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_16820 a9976af3149424dd35f992370be813e8 422 SUPERFAMILY SSF55174 324 418 1.05E-13 T 14-10-2018 BJD94_16820 a9976af3149424dd35f992370be813e8 422 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_16820 a9976af3149424dd35f992370be813e8 422 SUPERFAMILY SSF52374 7 326 5.12E-97 T 14-10-2018 BJD94_16820 a9976af3149424dd35f992370be813e8 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 418 1.2E-116 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Gene3D G3DSA:3.40.50.620 1 225 7.9E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_16820 a9976af3149424dd35f992370be813e8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.058 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Gene3D G3DSA:1.10.240.10 226 328 9.1E-36 T 14-10-2018 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Gene3D G3DSA:3.10.290.10 329 422 4.2E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Pfam PF00579 tRNA synthetases class I (W and Y) 32 326 2.2E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_16820 a9976af3149424dd35f992370be813e8 422 Pfam PF01479 S4 domain 360 388 1.6E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 Gene3D G3DSA:1.10.3720.10 281 530 3.7E-27 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 Gene3D G3DSA:1.10.3720.10 6 259 1.4E-41 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 SUPERFAMILY SSF161098 15 257 6.93E-41 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 SUPERFAMILY SSF161098 280 518 1.11E-29 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 516 3.6E-165 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 512 1.4E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_09595 bb0e3dcaa2dab092073bedf40fe86e4a 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 255 3.8E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 Gene3D G3DSA:3.30.70.1560 121 220 7.6E-40 T 14-10-2018 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 SUPERFAMILY SSF55120 54 229 7.36E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 Pfam PF00849 RNA pseudouridylate synthase 57 201 1.5E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 Gene3D G3DSA:3.30.70.580 45 120 6.4E-27 T 14-10-2018 BJD94_01290 f79a268ae84d6d046463273581082bc2 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 229 9.0E-59 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 SMART SM00861 353 524 1.1E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.7E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Gene3D G3DSA:3.40.50.970 325 536 7.4E-86 T 14-10-2018 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 SUPERFAMILY SSF52922 532 663 3.93E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 1.1E-165 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Gene3D G3DSA:3.40.50.970 1 324 7.1E-130 T 14-10-2018 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 3.7E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 SUPERFAMILY SSF52518 332 525 1.03E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 Gene3D G3DSA:3.40.50.920 537 663 2.0E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 SUPERFAMILY SSF52518 5 317 1.23E-118 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_15700 6d5ba6c23951b10b082b9285b8bfaaf0 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 PIRSF PIRSF000103 1 291 3.6E-74 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 Gene3D G3DSA:1.10.1040.10 167 291 1.3E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 SUPERFAMILY SSF48179 167 290 4.87E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 162 2.3E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 SUPERFAMILY SSF51735 4 166 8.76E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_20045 05bbfecbf6acbf6751f87b67caff2cbc 291 Gene3D G3DSA:3.40.50.720 2 166 2.6E-49 T 14-10-2018 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.152 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 SUPERFAMILY SSF53901 3 316 3.1E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 Gene3D G3DSA:3.40.47.10 1 316 6.9E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.2E-144 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.4E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_05725 328c7a28beaf4287d6e40ca811b58c21 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 4.1E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Pfam PF14863 Alkyl sulfatase dimerisation 397 536 2.6E-37 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 SUPERFAMILY SSF56281 30 538 3.63E-109 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Gene3D G3DSA:3.30.1050.10 538 671 5.4E-28 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 SMART SM00849 128 355 2.0E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Gene3D G3DSA:1.25.40.880 396 537 2.3E-35 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Pfam PF14864 Alkyl sulfatase C-terminal 545 667 9.1E-25 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Gene3D G3DSA:3.60.15.30 30 395 5.0E-117 T 14-10-2018 BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 Pfam PF00753 Metallo-beta-lactamase superfamily 124 341 3.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16850 3cc43212460da7e5a792af915b85b69d 674 SUPERFAMILY SSF55718 545 668 6.22E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 SUPERFAMILY SSF56112 6 328 9.77E-92 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.721 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 Gene3D G3DSA:1.10.510.10 60 258 1.9E-124 T 14-10-2018 BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 Gene3D G3DSA:1.20.1270.170 149 307 1.9E-124 T 14-10-2018 BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 Pfam PF01636 Phosphotransferase enzyme family 34 253 9.2E-46 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BJD94_10990 1b69ec15674d6c1eddfda4eec32509df 328 Gene3D G3DSA:3.30.200.70 13 108 1.9E-124 T 14-10-2018 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Pfam PF00196 Bacterial regulatory proteins, luxR family 530 584 3.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 561 573 4.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 545 561 4.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 531 545 4.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Gene3D G3DSA:3.20.20.450 139 384 2.2E-72 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SUPERFAMILY SSF141868 141 383 4.05E-71 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SMART SM00448 1 118 4.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Pfam PF00072 Response regulator receiver domain 3 118 4.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Gene3D G3DSA:3.40.50.2300 394 512 1.7E-5 T 14-10-2018 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Pfam PF00563 EAL domain 140 370 2.6E-64 T 14-10-2018 IPR001633 EAL domain BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SUPERFAMILY SSF52172 397 525 3.13E-6 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20875 54a614cfdcb596aab049220982f129bc 588 ProSitePatterns PS00622 LuxR-type HTH domain signature. 545 572 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SMART SM00421 528 585 4.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Gene3D G3DSA:1.10.10.10 519 587 9.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SUPERFAMILY SSF52172 1 131 1.85E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20875 54a614cfdcb596aab049220982f129bc 588 Gene3D G3DSA:3.40.50.2300 1 131 8.6E-29 T 14-10-2018 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SUPERFAMILY SSF46894 522 585 2.01E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_20875 54a614cfdcb596aab049220982f129bc 588 SMART SM00052 134 375 4.3E-68 T 14-10-2018 IPR001633 EAL domain BJD94_13585 a1c6685466d8336cd66bd00a70b65595 230 Gene3D G3DSA:3.30.70.2970 41 148 8.4E-51 T 14-10-2018 BJD94_13585 a1c6685466d8336cd66bd00a70b65595 230 Pfam PF04402 Protein of unknown function (DUF541) 30 227 1.4E-42 T 14-10-2018 IPR007497 Protein of unknown function DUF541 BJD94_13585 a1c6685466d8336cd66bd00a70b65595 230 Gene3D G3DSA:3.30.110.170 31 227 8.4E-51 T 14-10-2018 BJD94_12380 dcc82952b893f49d4da86190b42d9658 154 SUPERFAMILY SSF52540 27 149 2.79E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12380 dcc82952b893f49d4da86190b42d9658 154 Gene3D G3DSA:3.40.50.300 1 152 9.8E-49 T 14-10-2018 BJD94_12380 dcc82952b893f49d4da86190b42d9658 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.2E-51 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BJD94_12380 dcc82952b893f49d4da86190b42d9658 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.3E-42 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.3E-71 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PIRSF PIRSF002133 1 124 2.2E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 Gene3D G3DSA:2.40.50.140 1 124 8.4E-64 T 14-10-2018 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 SUPERFAMILY SSF50249 3 123 2.4E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.5E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12595 5ffbb7826d3b77841f4d614d00008e61 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.98 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 Pfam PF00232 Glycosyl hydrolase family 1 15 440 1.5E-150 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 1.8E-187 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 SUPERFAMILY SSF51445 16 440 1.47E-157 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18505 4bdc67004ea3238be89042f635ddfc7d 449 Gene3D G3DSA:3.20.20.80 9 446 3.6E-163 T 14-10-2018 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 Pfam PF00072 Response regulator receiver domain 7 117 2.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 9.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 SMART SM00862 158 234 1.6E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 SUPERFAMILY SSF46894 135 235 8.22E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-35 T 14-10-2018 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 SUPERFAMILY SSF52172 5 129 2.42E-40 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 SMART SM00448 5 116 3.9E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06680 559cc125bc5f8c307f0725d4d474fed3 242 Gene3D G3DSA:1.10.10.10 124 238 4.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 Gene3D G3DSA:1.10.10.10 5 97 3.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 Gene3D G3DSA:3.40.190.10 98 283 1.1E-40 T 14-10-2018 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 Pfam PF03466 LysR substrate binding domain 91 294 2.2E-31 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 SUPERFAMILY SSF53850 93 297 1.21E-29 T 14-10-2018 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 Gene3D G3DSA:3.40.190.10 169 271 1.1E-40 T 14-10-2018 BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 SUPERFAMILY SSF46785 6 88 3.75E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18860 7588fabfe081077dc2122e0975082ba3 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.7E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 50.001 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 Pfam PF08468 Methyltransferase small domain N-terminal 49 168 2.5E-5 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 PIRSF PIRSF037565 1 376 1.7E-174 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 SUPERFAMILY SSF53335 193 355 5.78E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 Pfam PF05175 Methyltransferase small domain 200 373 1.4E-52 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 Gene3D G3DSA:3.40.50.150 8 182 1.2E-52 T 14-10-2018 BJD94_00065 b8f550d84c6399767b0355bf2651cc2f 376 Gene3D G3DSA:3.40.50.150 186 376 1.8E-47 T 14-10-2018 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 50.001 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 Pfam PF08468 Methyltransferase small domain N-terminal 49 168 2.5E-5 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 PIRSF PIRSF037565 1 376 1.7E-174 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 SUPERFAMILY SSF53335 193 355 5.78E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 Pfam PF05175 Methyltransferase small domain 200 373 1.4E-52 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 Gene3D G3DSA:3.40.50.150 8 182 1.2E-52 T 14-10-2018 BJD94_14845 b8f550d84c6399767b0355bf2651cc2f 376 Gene3D G3DSA:3.40.50.150 186 376 1.8E-47 T 14-10-2018 BJD94_01025 ab711863bfc4e8bc4dcd7f43ba9cc16c 526 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_01025 ab711863bfc4e8bc4dcd7f43ba9cc16c 526 SMART SM00862 24 100 1.2E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_01025 ab711863bfc4e8bc4dcd7f43ba9cc16c 526 SUPERFAMILY SSF46894 6 103 1.28E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_01025 ab711863bfc4e8bc4dcd7f43ba9cc16c 526 Gene3D G3DSA:1.10.10.10 5 105 9.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_01025 ab711863bfc4e8bc4dcd7f43ba9cc16c 526 Gene3D G3DSA:1.25.40.10 357 518 3.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 Gene3D G3DSA:1.20.1440.100 17 90 7.6E-55 T 14-10-2018 BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 2.4E-25 T 14-10-2018 BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 Gene3D G3DSA:3.40.50.1000 6 216 7.6E-55 T 14-10-2018 IPR023214 HAD superfamily BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 SUPERFAMILY SSF56784 5 209 3.81E-27 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 1.3E-25 T 14-10-2018 BJD94_18835 72a96b430af56134c52e54e3b8cf2a75 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 8.9E-51 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 9.1E-50 T 14-10-2018 IPR000160 GGDEF domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SUPERFAMILY SSF55785 169 261 8.9E-6 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SUPERFAMILY SSF55785 266 392 1.92E-19 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SUPERFAMILY SSF55073 417 576 4.97E-46 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SMART SM00091 279 346 0.0032 T 14-10-2018 IPR000014 PAS domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SMART SM00091 38 101 280.0 T 14-10-2018 IPR000014 PAS domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SMART SM00091 158 223 25.0 T 14-10-2018 IPR000014 PAS domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 Gene3D G3DSA:3.30.70.270 407 579 3.3E-52 T 14-10-2018 BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 Pfam PF08448 PAS fold 285 395 7.4E-18 T 14-10-2018 IPR013656 PAS fold-4 BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 Gene3D G3DSA:3.30.450.20 268 406 7.0E-24 T 14-10-2018 BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 1.6E-13 T 14-10-2018 IPR000014 PAS domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 Gene3D G3DSA:3.30.450.20 160 267 5.4E-7 T 14-10-2018 BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 SMART SM00267 401 577 5.6E-68 T 14-10-2018 IPR000160 GGDEF domain BJD94_08765 d592f38ea4698cd20862526b6e50e8b0 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 5.4E-49 T 14-10-2018 IPR000160 GGDEF domain BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Pfam PF13437 HlyD family secretion protein 163 264 2.5E-13 T 14-10-2018 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Pfam PF13533 Biotin-lipoyl like 68 112 3.6E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Gene3D G3DSA:2.40.50.100 65 197 1.9E-72 T 14-10-2018 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Gene3D G3DSA:2.40.420.20 279 348 1.9E-72 T 14-10-2018 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Gene3D G3DSA:1.10.287.470 99 158 1.9E-72 T 14-10-2018 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 2.3E-70 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 SUPERFAMILY SSF111369 57 275 1.05E-32 T 14-10-2018 BJD94_21155 8a6c55ca1561adaf49b16a1d530c711b 357 Gene3D G3DSA:2.40.30.170 55 278 1.9E-72 T 14-10-2018 BJD94_17710 490e1101031f6bd40cd63cbc3b85c2ec 325 SUPERFAMILY SSF55909 19 313 2.55E-36 T 14-10-2018 BJD94_17710 490e1101031f6bd40cd63cbc3b85c2ec 325 Pfam PF02274 Amidinotransferase 23 318 2.4E-62 T 14-10-2018 BJD94_17710 490e1101031f6bd40cd63cbc3b85c2ec 325 PIRSF PIRSF028188 4 321 5.3E-150 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type BJD94_17710 490e1101031f6bd40cd63cbc3b85c2ec 325 Gene3D G3DSA:3.75.10.10 19 313 1.1E-43 T 14-10-2018 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF52317 1037 1295 1.43E-97 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:3.40.50.880 983 1297 1.2E-138 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF82697 1 151 4.08E-51 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF56042 825 1035 2.39E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:3.90.650.10 420 606 1.8E-58 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SMART SM01211 1041 1296 7.3E-156 T 14-10-2018 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF55326 221 428 1.15E-65 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF109736 155 220 7.98E-22 T 14-10-2018 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:1.10.8.750 153 213 1.7E-27 T 14-10-2018 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF56042 432 615 2.84E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 SUPERFAMILY SSF55326 619 816 6.54E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.335 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:3.90.650.10 809 982 2.0E-30 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 1.8E-27 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 967 1.1E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 5.4E-105 T 14-10-2018 BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:3.30.1330.10 614 808 1.6E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_07920 3f44a73b6c7fffc902336b4e1680bffb 1297 Gene3D G3DSA:3.30.1330.10 214 419 1.9E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.70.1430 569 678 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:1.20.1640.10 20 517 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:1.20.1640.10 518 1040 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.70.1430 47 826 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.2090.10 188 278 1.5E-227 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82714 194 275 4.32E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82693 149 336 6.54E-10 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82866 305 503 9.68E-38 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.70.1320 143 340 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82714 731 815 1.31E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82693 47 138 4.01E-19 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82693 567 681 1.02E-13 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 SUPERFAMILY SSF82866 820 1047 5.1E-42 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.2090.10 728 818 1.5E-227 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Gene3D G3DSA:3.30.70.1440 679 888 1.5E-227 T 14-10-2018 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 6.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_21670 a1a2ad90cb8a6ecd198a5634fcb554b3 1049 Pfam PF00873 AcrB/AcrD/AcrF family 14 1042 3.3E-159 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 9.4E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Gene3D G3DSA:2.40.40.20 649 813 8.4E-47 T 14-10-2018 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 SUPERFAMILY SSF50692 669 817 1.94E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Gene3D G3DSA:3.40.228.10 179 641 1.9E-241 T 14-10-2018 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 SUPERFAMILY SSF53706 42 660 7.2E-169 T 14-10-2018 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Gene3D G3DSA:3.90.55.10 82 615 1.9E-241 T 14-10-2018 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Pfam PF00384 Molybdopterin oxidoreductase 87 561 2.1E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 Gene3D G3DSA:3.40.50.740 87 569 1.9E-241 T 14-10-2018 BJD94_05270 68d031164b51bf17c190f6a93fac28eb 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BJD94_09945 833fa0155f2be824319faa9224355558 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 136 1.1E-27 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Gene3D G3DSA:3.40.120.10 176 256 3.8E-32 T 14-10-2018 BJD94_09945 833fa0155f2be824319faa9224355558 472 Gene3D G3DSA:3.30.310.50 375 472 4.6E-26 T 14-10-2018 BJD94_09945 833fa0155f2be824319faa9224355558 472 SUPERFAMILY SSF55957 406 470 1.16E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 SUPERFAMILY SSF53738 244 365 3.65E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 408 469 6.6E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Gene3D G3DSA:3.40.120.10 5 148 1.8E-42 T 14-10-2018 BJD94_09945 833fa0155f2be824319faa9224355558 472 SUPERFAMILY SSF53738 158 258 3.14E-12 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 SUPERFAMILY SSF53738 12 137 3.41E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 1.6E-8 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 377 7.0E-11 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_09945 833fa0155f2be824319faa9224355558 472 Gene3D G3DSA:3.40.120.10 257 373 7.9E-39 T 14-10-2018 BJD94_14255 36a89d22baaeeb8b3320375c12115015 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal BJD94_14255 36a89d22baaeeb8b3320375c12115015 445 SUPERFAMILY SSF53098 94 390 3.03E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_14255 36a89d22baaeeb8b3320375c12115015 445 Pfam PF01609 Transposase DDE domain 129 356 2.1E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 BJD94_18100 36a89d22baaeeb8b3320375c12115015 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal BJD94_18100 36a89d22baaeeb8b3320375c12115015 445 SUPERFAMILY SSF53098 94 390 3.03E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_18100 36a89d22baaeeb8b3320375c12115015 445 Pfam PF01609 Transposase DDE domain 129 356 2.1E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 BJD94_19420 36a89d22baaeeb8b3320375c12115015 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal BJD94_19420 36a89d22baaeeb8b3320375c12115015 445 SUPERFAMILY SSF53098 94 390 3.03E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_19420 36a89d22baaeeb8b3320375c12115015 445 Pfam PF01609 Transposase DDE domain 129 356 2.1E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.2E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 SUPERFAMILY SSF100950 74 234 2.16E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 Gene3D G3DSA:1.10.10.10 1 53 5.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 SUPERFAMILY SSF46785 4 61 7.76E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 SMART SM00420 6 58 2.9E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 Gene3D G3DSA:3.30.750.70 70 140 1.0E-5 T 14-10-2018 BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 SMART SM01134 73 234 1.0E-66 T 14-10-2018 BJD94_17535 fdc7788fbd561f8628c41fe204b59116 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 9.4E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.2E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Gene3D G3DSA:3.40.120.10 12 218 4.7E-73 T 14-10-2018 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.8E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Gene3D G3DSA:3.40.120.10 319 442 1.7E-35 T 14-10-2018 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 SUPERFAMILY SSF53738 209 317 1.29E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 1.1E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 537 3.9E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Gene3D G3DSA:3.40.120.10 221 318 1.0E-44 T 14-10-2018 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 SUPERFAMILY SSF53738 305 447 5.49E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 SUPERFAMILY SSF53738 26 235 8.24E-52 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 SUPERFAMILY SSF55957 432 543 2.14E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_07025 bee561c61b1a68db98e53d59aa2b361f 548 Gene3D G3DSA:3.30.310.50 443 546 2.2E-34 T 14-10-2018 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Gene3D G3DSA:2.60.40.10 194 305 6.7E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 422 436 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Gene3D G3DSA:2.60.120.260 1 193 1.1E-70 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Gene3D G3DSA:2.70.98.10 719 990 7.3E-81 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 PRINTS PR00132 Glycosyl hydrolase family 2 signature 493 508 6.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 PRINTS PR00132 Glycosyl hydrolase family 2 signature 347 365 6.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 PRINTS PR00132 Glycosyl hydrolase family 2 signature 422 437 6.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 PRINTS PR00132 Glycosyl hydrolase family 2 signature 121 136 6.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 PRINTS PR00132 Glycosyl hydrolase family 2 signature 316 330 6.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SUPERFAMILY SSF49303 599 691 4.32E-20 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SUPERFAMILY SSF51445 307 585 2.25E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 30 193 7.6E-49 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 307 591 2.8E-114 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Gene3D G3DSA:2.60.40.10 588 688 2.0E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SUPERFAMILY SSF74650 701 987 6.91E-86 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Pfam PF16353 Domain of unknown function(DUF4981) 602 686 6.1E-14 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 357 382 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Gene3D G3DSA:3.20.20.80 306 586 1.4E-101 T 14-10-2018 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SUPERFAMILY SSF49303 195 305 3.29E-25 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SMART SM01038 714 985 2.4E-125 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 SUPERFAMILY SSF49785 2 192 1.84E-58 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Pfam PF02929 Beta galactosidase small chain 716 984 1.9E-69 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_14625 944fe71440bad2ab11bf24adfd98e260 1018 Pfam PF00703 Glycosyl hydrolases family 2 195 305 8.6E-18 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_11655 e3d7942535c2d49fb637c5e6f77aaf20 405 Gene3D G3DSA:1.20.1250.20 204 399 3.5E-10 T 14-10-2018 BJD94_11655 e3d7942535c2d49fb637c5e6f77aaf20 405 Pfam PF07690 Major Facilitator Superfamily 19 276 4.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_11655 e3d7942535c2d49fb637c5e6f77aaf20 405 Gene3D G3DSA:1.20.1250.20 7 200 2.0E-13 T 14-10-2018 BJD94_11655 e3d7942535c2d49fb637c5e6f77aaf20 405 SUPERFAMILY SSF103473 9 399 5.36E-34 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_07885 292b2312ead095d73870cedbbe0f860b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.395 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 BJD94_07885 292b2312ead095d73870cedbbe0f860b 154 Gene3D G3DSA:3.40.50.2020 1 152 3.5E-40 T 14-10-2018 BJD94_07885 292b2312ead095d73870cedbbe0f860b 154 Pfam PF00156 Phosphoribosyl transferase domain 32 144 7.1E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_07885 292b2312ead095d73870cedbbe0f860b 154 SUPERFAMILY SSF53271 5 146 1.05E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 2.2E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 1.0E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 SUPERFAMILY SSF161098 194 382 6.8E-22 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 Gene3D G3DSA:1.10.3720.10 79 182 2.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 Gene3D G3DSA:1.10.3720.10 190 397 2.3E-30 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04420 b51845172a22cedb0fbd35727c9e5ca0 401 SUPERFAMILY SSF161098 92 160 1.01E-11 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Pfam PF00005 ABC transporter 499 647 6.9E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Gene3D G3DSA:3.40.50.300 472 727 9.8E-91 T 14-10-2018 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 SMART SM00382 507 693 2.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 45 718 1.8E-242 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 SUPERFAMILY SSF52540 474 717 7.07E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Pfam PF03412 Peptidase C39 family 50 149 1.8E-5 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Gene3D G3DSA:1.20.1560.10 155 469 3.4E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Gene3D G3DSA:3.90.70.10 33 154 4.4E-11 T 14-10-2018 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 SUPERFAMILY SSF90123 156 467 1.7E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_15365 411996ec66e46d346c1619dae0e7d8d9 727 Pfam PF00664 ABC transporter transmembrane region 171 437 3.1E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 SMART SM00267 188 353 7.2E-26 T 14-10-2018 IPR000160 GGDEF domain BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 349 1.3E-27 T 14-10-2018 IPR000160 GGDEF domain BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 SMART SM00052 363 615 2.3E-69 T 14-10-2018 IPR001633 EAL domain BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 SUPERFAMILY SSF55073 204 354 2.35E-32 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 Gene3D G3DSA:3.30.70.270 198 364 4.1E-34 T 14-10-2018 BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 352 6.5E-25 T 14-10-2018 IPR000160 GGDEF domain BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 Pfam PF00563 EAL domain 381 610 3.9E-55 T 14-10-2018 IPR001633 EAL domain BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 SUPERFAMILY SSF141868 382 621 3.14E-69 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15860 426141cf5165fe0148c43c2155d35f3d 629 Gene3D G3DSA:3.20.20.450 365 625 1.6E-70 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BJD94_01315 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 BJD94_17405 dae35f82d45e2c436a4f6e8b61958e2b 333 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 332 4.7E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_17405 dae35f82d45e2c436a4f6e8b61958e2b 333 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 330 3.0E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_17405 dae35f82d45e2c436a4f6e8b61958e2b 333 SUPERFAMILY SSF55073 184 332 1.65E-37 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_17405 dae35f82d45e2c436a4f6e8b61958e2b 333 SMART SM00267 168 333 5.8E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_17405 dae35f82d45e2c436a4f6e8b61958e2b 333 Gene3D G3DSA:3.30.70.270 167 333 5.5E-46 T 14-10-2018 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 Pfam PF09278 MerR, DNA binding 46 107 2.8E-16 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 SUPERFAMILY SSF46955 1 126 1.21E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 SMART SM00422 1 70 6.4E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 3.9E-58 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 Gene3D G3DSA:1.10.1660.10 1 125 1.2E-31 T 14-10-2018 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_20765 b94593a0ff6c3f6f91728affc7bb0e2f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 201 384 1.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 SMART SM00283 156 417 1.1E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 Gene3D G3DSA:1.10.287.950 89 418 1.4E-68 T 14-10-2018 BJD94_09065 631cb01b8e7c2cc7f0f20664f1565dc0 418 SUPERFAMILY SSF58104 109 418 9.42E-76 T 14-10-2018 BJD94_02415 b7ae1f008151d94e49ae84afed3ce60a 153 Pfam PF02566 OsmC-like protein 55 150 3.2E-15 T 14-10-2018 IPR003718 OsmC/Ohr family BJD94_02415 b7ae1f008151d94e49ae84afed3ce60a 153 Gene3D G3DSA:3.30.300.20 1 153 4.5E-51 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_02415 b7ae1f008151d94e49ae84afed3ce60a 153 SUPERFAMILY SSF82784 1 152 1.96E-49 T 14-10-2018 IPR036102 OsmC/Ohr superfamily BJD94_18995 589e75aaa87c227672c10785866edfab 251 Gene3D G3DSA:1.10.10.10 141 248 5.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18995 589e75aaa87c227672c10785866edfab 251 SUPERFAMILY SSF46894 179 246 1.22E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_18995 589e75aaa87c227672c10785866edfab 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 229 2.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18995 589e75aaa87c227672c10785866edfab 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 217 2.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18995 589e75aaa87c227672c10785866edfab 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 201 2.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18995 589e75aaa87c227672c10785866edfab 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 239 2.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18995 589e75aaa87c227672c10785866edfab 251 SMART SM00421 184 241 2.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.645 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 Gene3D G3DSA:3.65.10.10 242 419 5.8E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 SUPERFAMILY SSF55205 1 424 6.41E-146 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 3.6E-144 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 Gene3D G3DSA:3.65.10.10 20 224 5.8E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 1.0E-157 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 PIRSF PIRSF000505 1 427 1.9E-157 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD94_01335 c2d6440a6659be7329e4588d202d1f19 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD94_07170 259abde98c0092337896370d86478d80 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_07170 259abde98c0092337896370d86478d80 275 Pfam PF00106 short chain dehydrogenase 3 185 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_07170 259abde98c0092337896370d86478d80 275 Gene3D G3DSA:3.40.50.720 2 262 4.2E-56 T 14-10-2018 BJD94_07170 259abde98c0092337896370d86478d80 275 SUPERFAMILY SSF51735 2 270 3.15E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 530 594 8.2E-9 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Pfam PF03413 Peptidase propeptide and YPEB domain 115 191 3.1E-10 T 14-10-2018 IPR025711 PepSY domain BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Gene3D G3DSA:2.60.120.380 509 609 3.3E-43 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 52 97 2.6E-10 T 14-10-2018 IPR011096 FTP domain BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 SUPERFAMILY SSF89260 510 605 5.75E-5 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Gene3D G3DSA:3.10.450.490 20 110 8.6E-8 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 SUPERFAMILY SSF55486 200 500 5.49E-87 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 358 3.1E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 425 441 3.1E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 374 3.1E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 308 328 3.1E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 209 351 1.1E-36 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Gene3D G3DSA:3.10.170.10 199 355 6.9E-61 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Gene3D G3DSA:3.10.450.40 111 196 3.2E-28 T 14-10-2018 BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Gene3D G3DSA:1.10.390.10 356 505 6.5E-50 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD94_17280 2daccac4f00a732468c7362d03bda50a 609 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 354 498 1.0E-36 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00072 Response regulator receiver domain 6 115 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.10.60 382 469 2.2E-25 T 14-10-2018 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00448 4 115 5.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00382 163 306 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.8.60 314 381 9.5E-17 T 14-10-2018 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52540 142 386 4.19E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 6.3E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 469 2.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52172 2 188 4.41E-44 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.300 128 313 1.1E-67 T 14-10-2018 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-40 T 14-10-2018 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF46689 383 468 9.68E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 1.8E-239 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 BJD94_10555 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00158 Sigma-54 interaction domain 143 309 2.7E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_03845 fd1ab00a75d35caf9adda57f42d5dc1c 293 SUPERFAMILY SSF82689 198 286 1.57E-7 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD94_03845 fd1ab00a75d35caf9adda57f42d5dc1c 293 Pfam PF00924 Mechanosensitive ion channel 87 284 3.1E-35 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_03845 fd1ab00a75d35caf9adda57f42d5dc1c 293 Gene3D G3DSA:3.30.70.100 196 290 6.9E-7 T 14-10-2018 BJD94_03845 fd1ab00a75d35caf9adda57f42d5dc1c 293 Gene3D G3DSA:2.30.30.60 141 189 3.0E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_03845 fd1ab00a75d35caf9adda57f42d5dc1c 293 SUPERFAMILY SSF50182 126 186 3.27E-14 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 TIGRFAM TIGR00277 HDIG: HDIG domain 149 242 1.5E-7 T 14-10-2018 IPR006675 HDIG domain BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 Pfam PF01966 HD domain 153 273 1.8E-15 T 14-10-2018 IPR006674 HD domain BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 Pfam PF11871 Domain of unknown function (DUF3391) 2 120 1.2E-23 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 SUPERFAMILY SSF109604 142 313 3.37E-26 T 14-10-2018 BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 SMART SM00471 147 283 1.1E-7 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_13325 b9122e23b79c1f483b6a9afa64e0d336 400 Gene3D G3DSA:1.10.3210.10 5 313 6.2E-56 T 14-10-2018 BJD94_17630 6545034e43d78f66d1a6f6aa6b262c65 659 Gene3D G3DSA:1.10.287.950 329 659 4.1E-69 T 14-10-2018 BJD94_17630 6545034e43d78f66d1a6f6aa6b262c65 659 SUPERFAMILY SSF58104 350 659 2.09E-72 T 14-10-2018 BJD94_17630 6545034e43d78f66d1a6f6aa6b262c65 659 SMART SM00283 397 658 6.6E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17630 6545034e43d78f66d1a6f6aa6b262c65 659 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 131 8.7E-13 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD94_17630 6545034e43d78f66d1a6f6aa6b262c65 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 442 625 1.6E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20745 2276ebaa1ba5c98ae1baf2dd6849a84a 123 Gene3D G3DSA:1.10.287.1080 1 121 3.9E-11 T 14-10-2018 BJD94_20745 2276ebaa1ba5c98ae1baf2dd6849a84a 123 SUPERFAMILY SSF101386 3 102 1.14E-12 T 14-10-2018 BJD94_20745 2276ebaa1ba5c98ae1baf2dd6849a84a 123 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 6.6E-17 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 150 271 2.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 6.7E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.4E-68 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF51905 1 322 9.72E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PIRSF PIRSF000350 1 469 5.2E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 3.0E-149 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.8E-41 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.8E-41 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.8E-41 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.8E-41 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.8E-41 T 14-10-2018 BJD94_14015 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 9 332 2.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 SUPERFAMILY SSF116726 390 437 2.75E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Gene3D G3DSA:3.30.70.1450 140 232 1.4E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 SUPERFAMILY SSF116726 136 223 1.57E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.0E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.0E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.0E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.0E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.0E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Gene3D G3DSA:3.40.50.720 2 139 4.0E-51 T 14-10-2018 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Pfam PF02254 TrkA-N domain 3 123 5.0E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Pfam PF02254 TrkA-N domain 235 350 4.6E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Pfam PF02080 TrkA-C domain 390 449 8.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 SUPERFAMILY SSF51735 1 151 1.46E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Gene3D G3DSA:3.40.50.720 233 366 1.7E-37 T 14-10-2018 BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 SUPERFAMILY SSF51735 232 376 3.02E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10960 f52802f189328c3b11aad58b6cf9f483 458 Gene3D G3DSA:3.30.70.1450 367 458 9.7E-29 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 SUPERFAMILY SSF53850 84 290 3.98E-27 T 14-10-2018 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 Gene3D G3DSA:3.40.190.10 162 260 1.9E-40 T 14-10-2018 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 Gene3D G3DSA:3.40.190.10 102 285 1.9E-40 T 14-10-2018 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 Gene3D G3DSA:1.10.10.10 6 95 3.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 Pfam PF03466 LysR substrate binding domain 90 287 6.0E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 SUPERFAMILY SSF46785 3 83 9.62E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20220 019368f29899d7858c9a15e22a0e339f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 431 2.9E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 Gene3D G3DSA:2.60.120.430 32 213 2.7E-6 T 14-10-2018 BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 SUPERFAMILY SSF49785 40 212 1.28E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 SUPERFAMILY SSF55073 280 430 1.33E-39 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 427 6.8E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 SMART SM00267 264 431 5.0E-49 T 14-10-2018 IPR000160 GGDEF domain BJD94_04875 b66b95b01c07edc1bcdd107b16d30c52 442 Gene3D G3DSA:3.30.70.270 261 432 2.4E-48 T 14-10-2018 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 Pfam PF00483 Nucleotidyl transferase 6 273 4.4E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 Gene3D G3DSA:3.90.550.10 2 286 4.1E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 Gene3D G3DSA:2.160.10.10 287 403 3.1E-32 T 14-10-2018 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 SUPERFAMILY SSF51161 293 403 5.89E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.6E-154 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 SUPERFAMILY SSF53448 4 358 8.68E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.631 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_01350 22b859d4d9df5c72626f6a03c0f2756c 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 BJD94_19825 a36c31535d8ccad9f2047eeb48d1b04f 302 SUPERFAMILY SSF103481 41 137 3.4E-12 T 14-10-2018 BJD94_19825 a36c31535d8ccad9f2047eeb48d1b04f 302 SUPERFAMILY SSF103481 197 287 2.62E-12 T 14-10-2018 BJD94_19825 a36c31535d8ccad9f2047eeb48d1b04f 302 Pfam PF00892 EamA-like transporter family 3 135 2.4E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_19825 a36c31535d8ccad9f2047eeb48d1b04f 302 Pfam PF00892 EamA-like transporter family 151 280 2.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_11180 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BJD94_11180 770181c6141896912fcbeb419fab2839 359 SUPERFAMILY SSF52540 1 344 3.9E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11180 770181c6141896912fcbeb419fab2839 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.939 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BJD94_11180 770181c6141896912fcbeb419fab2839 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 4.0E-38 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BJD94_11180 770181c6141896912fcbeb419fab2839 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 1.1E-121 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BJD94_11180 770181c6141896912fcbeb419fab2839 359 Gene3D G3DSA:1.20.1050.90 121 298 3.0E-84 T 14-10-2018 BJD94_11180 770181c6141896912fcbeb419fab2839 359 Gene3D G3DSA:3.40.50.300 8 332 3.0E-84 T 14-10-2018 BJD94_11180 770181c6141896912fcbeb419fab2839 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 917 993 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4296 4372 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3969 4045 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3642 3718 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3315 3391 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1898 1974 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2661 2737 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4950 5026 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5713 5789 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2007 2083 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1244 1320 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5931 6007 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4405 4481 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2879 2955 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1353 1429 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5604 5680 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4078 4154 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2552 2628 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1026 1102 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2334 2410 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1571 1647 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3097 3173 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4623 4699 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5386 5462 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3860 3936 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5822 5898 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2770 2846 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5495 5571 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2443 2519 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5168 5244 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2116 2192 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4841 4917 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1789 1865 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4187 4263 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3424 3500 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1135 1211 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5059 5135 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3533 3609 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4732 4808 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3206 3282 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1680 1756 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 4514 4590 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2225 2301 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 3751 3827 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 2988 3064 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 1462 1538 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SMART SM00089 5277 5353 2.9 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 7528 7545 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 6911 6928 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 7511 7527 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 7493 7509 0.68 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 7516 7534 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 409 492 3.0E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 493 576 1.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 241 324 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 140 240 4.0E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 325 408 7.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 7507 7525 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2418 2517 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5143 5242 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 6009 6125 3.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3181 3280 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4380 4479 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 577 676 7.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1219 1318 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3617 3716 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2854 2953 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 892 991 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2745 2844 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3944 4043 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5579 5678 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4053 4152 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5906 6005 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 681 780 5.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5252 5351 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1546 1645 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5470 5569 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1328 1427 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4816 4915 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1982 2081 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5034 5133 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1764 1863 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3399 3498 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1437 1536 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5361 5460 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2963 3062 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4598 4697 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2200 2299 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1001 1100 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3835 3934 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5688 5787 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1110 1209 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2636 2735 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2527 2626 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4162 4261 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 5797 5896 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 783 882 1.6E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4271 4370 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3290 3389 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2309 2408 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4489 4588 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3072 3171 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 2091 2190 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3726 3825 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1873 1972 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4707 4806 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 1655 1754 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 3508 3607 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Gene3D G3DSA:2.60.40.10 4925 5024 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SUPERFAMILY SSF51120 7281 7587 1.14E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2272 2289 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1291 1308 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5978 5995 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4016 4033 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5215 5232 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2054 2071 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3253 3270 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1509 1526 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3798 3815 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5433 5450 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3035 3052 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3689 3706 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1727 1744 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3580 3597 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4779 4796 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1618 1635 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3471 3488 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4888 4905 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1945 1962 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3362 3379 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4997 5014 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1836 1853 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5106 5123 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4125 4142 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3144 3161 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2381 2398 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1182 1199 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 3907 3924 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5324 5341 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2926 2943 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2163 2180 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1400 1417 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4670 4687 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2708 2725 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5542 5559 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4561 4578 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5651 5668 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2817 2834 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4452 4469 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 1073 1090 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2490 2507 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4343 4360 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5760 5777 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 964 981 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 2599 2616 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 4234 4251 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 Pfam PF12245 Bacterial Ig-like domain (group 3) 5869 5886 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 PRINTS PR00313 NodO calcium binding signature 7520 7528 2.9E-5 T 14-10-2018 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 PRINTS PR00313 NodO calcium binding signature 7529 7537 2.9E-5 T 14-10-2018 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 PRINTS PR00313 NodO calcium binding signature 7508 7519 2.9E-5 T 14-10-2018 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 PRINTS PR00313 NodO calcium binding signature 7538 7547 2.9E-5 T 14-10-2018 BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 7525 7543 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_04465 98c86f08bd8091fc30263a40e0dde214 7648 SUPERFAMILY SSF53300 7156 7323 3.39E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20300 4452761a347362c1fe18763d550a52aa 397 SUPERFAMILY SSF52540 42 273 1.35E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20300 4452761a347362c1fe18763d550a52aa 397 Pfam PF00005 ABC transporter 44 195 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_20300 4452761a347362c1fe18763d550a52aa 397 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 385 1.5E-195 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 BJD94_20300 4452761a347362c1fe18763d550a52aa 397 SMART SM00382 52 253 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20300 4452761a347362c1fe18763d550a52aa 397 Gene3D G3DSA:3.40.50.300 32 323 4.2E-70 T 14-10-2018 BJD94_20300 4452761a347362c1fe18763d550a52aa 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Gene3D G3DSA:3.40.50.300 159 351 2.5E-60 T 14-10-2018 BJD94_15120 fce496400e133e1856531f906f4a590a 854 SUPERFAMILY SSF52540 168 491 4.06E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15120 fce496400e133e1856531f906f4a590a 854 SMART SM00382 207 352 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_15120 fce496400e133e1856531f906f4a590a 854 SMART SM00382 587 747 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_15120 fce496400e133e1856531f906f4a590a 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Gene3D G3DSA:3.40.50.300 353 534 7.5E-42 T 14-10-2018 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Gene3D G3DSA:3.40.50.300 540 756 8.1E-66 T 14-10-2018 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Gene3D G3DSA:1.10.8.60 759 852 5.7E-10 T 14-10-2018 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 325 2.3E-9 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Gene3D G3DSA:1.10.1780.10 1 158 1.7E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_15120 fce496400e133e1856531f906f4a590a 854 SUPERFAMILY SSF81923 11 128 4.81E-15 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_15120 fce496400e133e1856531f906f4a590a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 698 712 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 BJD94_15120 fce496400e133e1856531f906f4a590a 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 754 2.4E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_15120 fce496400e133e1856531f906f4a590a 854 SUPERFAMILY SSF52540 536 844 9.27E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15120 fce496400e133e1856531f906f4a590a 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 759 832 3.1E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_15120 fce496400e133e1856531f906f4a590a 854 SMART SM01086 759 851 1.3E-6 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 Gene3D G3DSA:2.40.50.1020 162 242 2.4E-8 T 14-10-2018 BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 Pfam PF00072 Response regulator receiver domain 5 112 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 SMART SM00448 2 112 2.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 Gene3D G3DSA:3.40.50.2300 1 128 2.3E-30 T 14-10-2018 BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 SUPERFAMILY SSF52172 1 121 2.56E-30 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 SMART SM00850 145 239 1.3E-23 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD94_08530 b17d49702824d155b8cb51228d4c310a 242 Pfam PF04397 LytTr DNA-binding domain 146 238 7.0E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 Gene3D G3DSA:3.40.50.10490 99 292 7.2E-241 T 14-10-2018 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 Gene3D G3DSA:3.40.50.10490 13 507 7.2E-241 T 14-10-2018 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 Pfam PF00342 Phosphoglucose isomerase 53 542 9.7E-254 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 Gene3D G3DSA:1.10.1390.10 508 550 3.3E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.888 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 SUPERFAMILY SSF53697 6 548 8.62E-226 T 14-10-2018 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12875 1e174aff519c0d569792e89451f5645f 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 9.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_16930 cf6d94a0c8f938f53b5ef3490e42fa38 388 Gene3D G3DSA:2.40.160.50 183 387 4.3E-10 T 14-10-2018 BJD94_16930 cf6d94a0c8f938f53b5ef3490e42fa38 388 SUPERFAMILY SSF56935 98 376 3.66E-6 T 14-10-2018 BJD94_16930 cf6d94a0c8f938f53b5ef3490e42fa38 388 Pfam PF01103 Surface antigen 178 271 1.3E-5 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_01450 e7320602a1784dfe6e75dea4a31f393c 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.1E-146 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BJD94_01450 e7320602a1784dfe6e75dea4a31f393c 323 SUPERFAMILY SSF53335 91 323 3.14E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_01450 e7320602a1784dfe6e75dea4a31f393c 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.5E-172 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like BJD94_01450 e7320602a1784dfe6e75dea4a31f393c 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.418 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 BJD94_01450 e7320602a1784dfe6e75dea4a31f393c 323 Gene3D G3DSA:3.40.50.150 64 296 1.8E-21 T 14-10-2018 BJD94_08035 ff87526c9298f92d330930bbe1a4291e 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.694 T 14-10-2018 IPR005346 RnfH protein BJD94_08035 ff87526c9298f92d330930bbe1a4291e 117 Pfam PF03658 RnfH family Ubiquitin 8 90 4.0E-34 T 14-10-2018 IPR005346 RnfH protein BJD94_08035 ff87526c9298f92d330930bbe1a4291e 117 Gene3D G3DSA:3.10.20.280 2 92 1.8E-33 T 14-10-2018 IPR037021 RnfH superfamily BJD94_08035 ff87526c9298f92d330930bbe1a4291e 117 SUPERFAMILY SSF54285 6 82 2.05E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Gene3D G3DSA:3.30.450.20 52 268 8.2E-53 T 14-10-2018 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Pfam PF02743 Cache domain 43 258 8.6E-29 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Pfam PF00672 HAMP domain 300 346 3.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 SMART SM00304 353 403 3.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 SMART SM00304 296 350 6.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 SMART SM00283 365 626 9.9E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Gene3D G3DSA:1.10.287.950 297 627 4.0E-72 T 14-10-2018 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 SUPERFAMILY SSF103190 91 175 2.59E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 593 3.5E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 Gene3D G3DSA:3.30.450.20 64 168 8.2E-53 T 14-10-2018 BJD94_01925 10caddc4a000e9d2aac2051ced4e3499 627 SUPERFAMILY SSF58104 318 627 3.4E-76 T 14-10-2018 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:3.40.50.720 1 180 1.0E-56 T 14-10-2018 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:1.20.5.320 435 482 3.5E-25 T 14-10-2018 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 3.9E-234 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 3.9E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 PIRSF PIRSF000109 1 477 8.7E-242 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 2.9E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 SMART SM01350 179 469 5.2E-215 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:1.10.1040.10 181 434 6.3E-103 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 SUPERFAMILY SSF48179 177 472 9.07E-127 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_04315 6a52fec638c8c6a4185df51dcd91c20d 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 Gene3D G3DSA:3.10.310.10 196 386 1.2E-148 T 14-10-2018 BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 SUPERFAMILY SSF54506 201 406 2.04E-74 T 14-10-2018 BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 Pfam PF04303 PrpF protein 21 403 6.3E-174 T 14-10-2018 IPR007400 PrpF protein BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 Gene3D G3DSA:3.10.310.10 26 400 1.2E-148 T 14-10-2018 BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 SUPERFAMILY SSF54506 18 197 3.92E-70 T 14-10-2018 BJD94_04530 86cae006366ad59e4ec059513a6f6f67 408 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 19 407 1.3E-228 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 SUPERFAMILY SSF48452 185 347 4.67E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 Gene3D G3DSA:1.25.40.10 189 274 3.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 Gene3D G3DSA:1.25.40.10 275 373 7.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 SMART SM00028 319 352 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 SMART SM00028 285 318 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 SMART SM00028 185 218 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_13080 f1a640e73ab00c6a1889718ed35861aa 373 SMART SM00028 219 252 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 SUPERFAMILY SSF48498 82 207 7.11E-41 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 Gene3D G3DSA:1.10.357.10 2 208 6.2E-56 T 14-10-2018 BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD94_04990 38cde8f42de43e8ef083ecc41a32aaa9 208 SUPERFAMILY SSF46689 3 76 5.64E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Pfam PF02938 GAD domain 307 406 1.0E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.343 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 SUPERFAMILY SSF55681 108 582 1.26E-102 T 14-10-2018 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Gene3D G3DSA:2.40.50.140 1 106 2.7E-35 T 14-10-2018 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.5E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Gene3D G3DSA:3.30.930.10 118 578 5.7E-197 T 14-10-2018 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Gene3D G3DSA:3.30.1360.30 271 420 5.7E-197 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 SUPERFAMILY SSF55261 288 419 5.89E-48 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.5E-267 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 SUPERFAMILY SSF50249 1 105 6.29E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_01465 d959f4733c4cd71581d50fbdea999d2a 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 Gene3D G3DSA:3.10.105.10 296 513 4.6E-143 T 14-10-2018 BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 PIRSF PIRSF002741 2 537 2.5E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 Gene3D G3DSA:3.90.76.10 44 216 4.6E-143 T 14-10-2018 BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 2.3E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 Gene3D G3DSA:3.40.190.10 217 525 4.6E-143 T 14-10-2018 BJD94_05200 aa33acb856fdadc140752c0bfe00387d 538 SUPERFAMILY SSF53850 35 534 1.36E-127 T 14-10-2018 BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 Pfam PF00106 short chain dehydrogenase 2 192 1.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 SUPERFAMILY SSF51735 1 230 4.35E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 Gene3D G3DSA:3.40.50.720 1 230 1.2E-66 T 14-10-2018 BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_20930 c62453f2e14b4ce99671d88baf9d8e3b 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09135 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02330 502b3c7bbdbaa1ccc8febec5b15e5637 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 118 235 4.9E-28 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain BJD94_02330 502b3c7bbdbaa1ccc8febec5b15e5637 279 Pfam PF08666 SAF domain 44 110 3.2E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD94_02330 502b3c7bbdbaa1ccc8febec5b15e5637 279 SMART SM00858 43 111 3.9E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD94_02330 502b3c7bbdbaa1ccc8febec5b15e5637 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 277 3.2E-64 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 SUPERFAMILY SSF54909 76 146 1.88E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 140 5.8E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 Gene3D G3DSA:1.10.10.10 1 52 7.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 SMART SM00344 1 111 1.8E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 Gene3D G3DSA:3.30.70.920 54 149 1.1E-13 T 14-10-2018 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 SUPERFAMILY SSF46785 1 58 2.32E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16345 84a22d335acb897ea0c8258438d87c3d 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD94_14775 08c621949fe5d250b85a5a327321931d 355 SMART SM00925 107 240 1.9E-62 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 BJD94_14775 08c621949fe5d250b85a5a327321931d 355 Gene3D G3DSA:2.40.40.10 39 336 3.4E-134 T 14-10-2018 IPR036908 RlpA-like domain superfamily BJD94_14775 08c621949fe5d250b85a5a327321931d 355 SUPERFAMILY SSF50685 8 338 5.23E-100 T 14-10-2018 IPR036908 RlpA-like domain superfamily BJD94_14775 08c621949fe5d250b85a5a327321931d 355 Gene3D G3DSA:2.40.240.50 107 245 3.4E-134 T 14-10-2018 BJD94_14775 08c621949fe5d250b85a5a327321931d 355 Pfam PF06725 3D domain 260 336 1.8E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BJD94_14775 08c621949fe5d250b85a5a327321931d 355 Pfam PF03562 MltA specific insert domain 95 240 5.5E-36 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.7E-126 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 Gene3D G3DSA:3.40.50.720 3 307 2.4E-115 T 14-10-2018 BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.164 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 5.2E-45 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 SUPERFAMILY SSF51735 1 308 1.09E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10045 f2d7635356a1c9608b1d1ad41373df3b 313 Gene3D G3DSA:3.90.25.10 173 295 2.4E-115 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Gene3D G3DSA:3.40.50.300 2 264 1.1E-52 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SUPERFAMILY SSF54211 457 577 3.54E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SUPERFAMILY SSF54980 581 669 1.44E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Pfam PF03764 Elongation factor G, domain IV 457 575 1.1E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Gene3D G3DSA:2.40.30.10 268 383 1.2E-22 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SMART SM00838 578 666 2.3E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Pfam PF14492 Elongation Factor G, domain II 382 455 3.2E-24 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 142 2.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SUPERFAMILY SSF50447 243 371 3.03E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 4.1E-28 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Gene3D G3DSA:3.30.70.240 582 653 9.3E-78 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Pfam PF00679 Elongation factor G C-terminus 579 665 2.0E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SUPERFAMILY SSF54980 380 457 4.68E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Gene3D G3DSA:3.30.70.870 384 461 2.9E-23 T 14-10-2018 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 Gene3D G3DSA:3.30.230.10 463 666 9.3E-78 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SMART SM00889 458 576 1.2E-55 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD94_17140 676e5d6496a81d7fae0fe0823447a6dd 672 SUPERFAMILY SSF52540 2 259 5.18E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 Pfam PF01039 Carboxyl transferase domain 99 240 1.1E-14 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 Gene3D G3DSA:3.90.226.10 25 285 4.2E-83 T 14-10-2018 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 SUPERFAMILY SSF52096 25 282 2.36E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 8.9E-140 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.393 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00870 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_10485 a095b815a7fb764ab98bd1a7c55ff057 288 Gene3D G3DSA:2.30.30.830 91 158 2.3E-28 T 14-10-2018 BJD94_10485 a095b815a7fb764ab98bd1a7c55ff057 288 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 17 288 3.7E-81 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 BJD94_10485 a095b815a7fb764ab98bd1a7c55ff057 288 Pfam PF11356 Type II secretion system protein C 19 157 1.2E-41 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal BJD94_10485 a095b815a7fb764ab98bd1a7c55ff057 288 Gene3D G3DSA:2.30.42.10 185 288 1.4E-27 T 14-10-2018 BJD94_10485 a095b815a7fb764ab98bd1a7c55ff057 288 SUPERFAMILY SSF50156 192 287 2.48E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Pfam PF02817 e3 binding domain 325 359 3.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 SUPERFAMILY SSF51230 1 94 3.53E-22 T 14-10-2018 IPR011053 Single hybrid motif BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 SUPERFAMILY SSF47005 318 363 1.12E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 SUPERFAMILY SSF51230 101 193 1.83E-22 T 14-10-2018 IPR011053 Single hybrid motif BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Gene3D G3DSA:3.30.559.10 385 632 3.3E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 401 631 2.1E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Gene3D G3DSA:2.40.50.100 1 78 2.8E-20 T 14-10-2018 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Gene3D G3DSA:2.40.50.100 101 178 9.0E-21 T 14-10-2018 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Gene3D G3DSA:2.40.50.100 205 282 8.4E-21 T 14-10-2018 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Gene3D G3DSA:4.10.320.10 324 369 1.1E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Pfam PF00364 Biotin-requiring enzyme 4 73 5.1E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Pfam PF00364 Biotin-requiring enzyme 103 172 5.9E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 Pfam PF00364 Biotin-requiring enzyme 206 276 2.8E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 SUPERFAMILY SSF51230 206 297 3.66E-23 T 14-10-2018 IPR011053 Single hybrid motif BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 SUPERFAMILY SSF52777 390 631 3.34E-81 T 14-10-2018 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD94_14010 5ee7e9de1f31d36bf8ff26460d471200 632 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 179 632 8.9E-206 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 BJD94_20490 3c3728f3a226fcb8105e57ab357714a1 201 SMART SM00014 75 175 5.9E-5 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_20490 3c3728f3a226fcb8105e57ab357714a1 201 Gene3D G3DSA:1.20.144.10 104 185 6.6E-17 T 14-10-2018 BJD94_20490 3c3728f3a226fcb8105e57ab357714a1 201 SUPERFAMILY SSF48317 38 178 3.92E-28 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD94_20490 3c3728f3a226fcb8105e57ab357714a1 201 Pfam PF01569 PAP2 superfamily 98 180 5.2E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 SUPERFAMILY SSF56752 1 260 3.01E-68 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 1.5E-107 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 Gene3D G3DSA:3.30.470.10 1 107 8.4E-28 T 14-10-2018 BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 Gene3D G3DSA:3.20.10.10 112 266 3.1E-48 T 14-10-2018 BJD94_05700 48e9a6aa30fd0e471c33c58b3ada4a42 267 Pfam PF01063 Amino-transferase class IV 24 247 2.0E-43 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.9E-20 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.936 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 5.8E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.1E-56 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 SUPERFAMILY SSF55120 9 247 2.62E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Gene3D G3DSA:2.30.130.10 249 311 4.5E-21 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 SUPERFAMILY SSF88697 250 310 9.94E-15 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 6.6E-88 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_14335 e55388ea82f9dea8bd750f5903a161d1 314 Gene3D G3DSA:3.30.2350.10 1 248 9.1E-95 T 14-10-2018 BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 Gene3D G3DSA:3.40.50.300 1 234 5.2E-65 T 14-10-2018 BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 SUPERFAMILY SSF52540 1 231 5.93E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 8.4E-102 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 Pfam PF00005 ABC transporter 18 157 5.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 SMART SM00382 24 207 2.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09590 1afd5859e1f7b16766e3ee43ce20fa77 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_21100 4c4a1ab6023c8e1827d8691de8a83e9d 254 Pfam PF01909 Nucleotidyltransferase domain 39 88 7.3E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BJD94_21100 4c4a1ab6023c8e1827d8691de8a83e9d 254 Gene3D G3DSA:3.30.460.10 18 122 1.9E-9 T 14-10-2018 BJD94_21100 4c4a1ab6023c8e1827d8691de8a83e9d 254 SUPERFAMILY SSF81301 16 128 5.65E-15 T 14-10-2018 BJD94_00900 ff0e5a028f3b3d3d1380d4e3485e2ce1 368 SUPERFAMILY SSF52172 22 138 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00900 ff0e5a028f3b3d3d1380d4e3485e2ce1 368 SMART SM00448 20 132 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00900 ff0e5a028f3b3d3d1380d4e3485e2ce1 368 Gene3D G3DSA:3.40.50.2300 9 150 1.2E-33 T 14-10-2018 BJD94_00900 ff0e5a028f3b3d3d1380d4e3485e2ce1 368 Pfam PF00072 Response regulator receiver domain 23 132 4.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.220.10 1 159 7.3E-60 T 14-10-2018 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.630.10 181 497 2.5E-141 T 14-10-2018 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF53187 179 496 8.48E-126 T 14-10-2018 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.835 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.6E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD94_13260 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF52949 1 184 3.47E-52 T 14-10-2018 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 Gene3D G3DSA:3.30.870.10 39 232 1.6E-36 T 14-10-2018 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 SUPERFAMILY SSF56024 23 227 7.53E-40 T 14-10-2018 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 Pfam PF13091 PLD-like domain 63 210 1.2E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 Pfam PF13091 PLD-like domain 297 431 3.6E-22 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 SMART SM00155 151 178 0.3 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 SMART SM00155 385 412 0.025 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 SUPERFAMILY SSF56024 267 434 1.18E-34 T 14-10-2018 BJD94_06295 034e045bb9d3f1900f5db0aecc4d21e2 491 Gene3D G3DSA:3.30.870.10 273 457 3.3E-37 T 14-10-2018 BJD94_19445 bb05ea4f940de48160371e07e0ffc287 120 Pfam PF04076 Bacterial OB fold (BOF) protein 22 119 5.8E-32 T 14-10-2018 IPR005220 Bacterial OB-fold BJD94_19445 bb05ea4f940de48160371e07e0ffc287 120 SUPERFAMILY SSF101756 18 120 4.58E-33 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BJD94_19445 bb05ea4f940de48160371e07e0ffc287 120 Gene3D G3DSA:2.40.50.200 15 120 1.6E-35 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BJD94_01275 cf01a20f5fb6408bfef337e98d6abb4f 260 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 4.8E-46 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_09730 c04222f5714779e9f07179356985115e 290 SUPERFAMILY SSF103481 41 141 5.75E-14 T 14-10-2018 BJD94_09730 c04222f5714779e9f07179356985115e 290 SUPERFAMILY SSF103481 178 269 6.67E-13 T 14-10-2018 BJD94_09730 c04222f5714779e9f07179356985115e 290 Pfam PF00892 EamA-like transporter family 143 268 1.4E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_09730 c04222f5714779e9f07179356985115e 290 Pfam PF00892 EamA-like transporter family 6 137 2.4E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 Gene3D G3DSA:1.10.10.250 73 141 3.1E-24 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.2E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 SUPERFAMILY SSF54747 3 73 1.07E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.045 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 SMART SM00649 9 141 4.2E-81 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 Gene3D G3DSA:3.30.1550.10 2 72 1.7E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-21 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 8.0E-16 T 14-10-2018 BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 SUPERFAMILY SSF46906 68 141 1.7E-23 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BJD94_11935 c241ae0ca20240888e7402a5b1875218 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:1.10.287.1050 1 83 9.8E-30 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SMART SM00528 88 135 2.9E-25 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PIRSF PIRSF002096 1 135 2.6E-54 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Pfam PF00816 H-NS histone family 32 129 1.6E-19 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 14-10-2018 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 2 58 3.14E-16 T 14-10-2018 BJD94_05400 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:4.10.430.10 92 135 8.3E-25 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.906 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:3.30.190.20 130 243 3.3E-246 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Pfam PF00005 ABC transporter 622 859 3.7E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:3.40.50.300 616 935 1.7E-139 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:3.40.50.300 6 593 3.3E-246 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 SUPERFAMILY SSF52540 619 912 4.82E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 SUPERFAMILY SSF52540 4 568 2.17E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:1.20.1580.10 90 491 3.3E-246 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:1.10.8.280 286 402 3.3E-246 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 Gene3D G3DSA:1.20.1580.10 691 829 1.7E-139 T 14-10-2018 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_13030 6fa04c5d61daa7c595ba736f616d38ee 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 SUPERFAMILY SSF56801 11 540 2.62E-132 T 14-10-2018 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 7 535 3.7E-242 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Gene3D G3DSA:3.40.50.980 188 361 8.4E-54 T 14-10-2018 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Gene3D G3DSA:3.40.50.980 25 180 4.7E-37 T 14-10-2018 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Gene3D G3DSA:3.30.300.310 439 542 1.7E-29 T 14-10-2018 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Pfam PF00501 AMP-binding enzyme 39 443 4.4E-76 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Gene3D G3DSA:2.30.38.10 362 437 1.1E-25 T 14-10-2018 BJD94_16640 bbf97b3a5de38a60dc2037a0ebd6752e 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 3.3E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 Gene3D G3DSA:3.20.20.70 449 661 2.9E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 Pfam PF00535 Glycosyl transferase family 2 24 129 5.0E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 Gene3D G3DSA:3.90.550.10 22 229 6.7E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 Gene3D G3DSA:3.40.50.720 696 781 2.1E-7 T 14-10-2018 BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 SUPERFAMILY SSF53448 23 262 2.65E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 SUPERFAMILY SSF102114 455 631 1.03E-22 T 14-10-2018 BJD94_10130 512ec08ef65869a2a1bd8725b9d06090 793 Pfam PF04055 Radical SAM superfamily 463 603 1.3E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_01245 24ef267f83873dd3c490ac623638ccbb 225 SUPERFAMILY SSF161098 11 203 9.29E-42 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_01245 24ef267f83873dd3c490ac623638ccbb 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.7E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_01245 24ef267f83873dd3c490ac623638ccbb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.6E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_01245 24ef267f83873dd3c490ac623638ccbb 225 Gene3D G3DSA:1.10.3720.10 1 218 2.7E-50 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 Pfam PF00652 Ricin-type beta-trefoil lectin domain 339 429 2.1E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 Gene3D G3DSA:2.80.10.50 335 471 1.5E-43 T 14-10-2018 BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 SMART SM00458 338 465 2.7E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 SUPERFAMILY SSF50370 334 463 3.24E-18 T 14-10-2018 IPR035992 Ricin B-like lectins BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 Pfam PF07968 Leukocidin/Hemolysin toxin family 71 331 7.8E-66 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 SUPERFAMILY SSF56959 127 331 1.32E-7 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 Gene3D G3DSA:2.70.240.10 36 333 8.0E-86 T 14-10-2018 BJD94_15020 5053ba3bfe58f75033681e5c7f1172e4 471 Gene3D G3DSA:3.30.70.2270 153 203 8.0E-86 T 14-10-2018 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.349 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Gene3D G3DSA:3.90.78.10 223 346 1.1E-43 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Gene3D G3DSA:3.30.43.10 1 72 2.0E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Gene3D G3DSA:3.30.465.10 73 222 3.1E-51 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 SUPERFAMILY SSF56176 8 197 1.31E-40 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 1.7E-90 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Pfam PF01565 FAD binding domain 23 144 1.0E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 3.7E-32 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_11880 7c3fe50287877a982fb513452afe1e32 347 SUPERFAMILY SSF56194 207 342 1.18E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_04240 575b919a20093b0acfa6c0763ce6fe0d 397 Pfam PF00534 Glycosyl transferases group 1 186 346 1.2E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_04240 575b919a20093b0acfa6c0763ce6fe0d 397 Gene3D G3DSA:3.40.50.2000 172 353 1.9E-56 T 14-10-2018 BJD94_04240 575b919a20093b0acfa6c0763ce6fe0d 397 Gene3D G3DSA:3.40.50.2000 72 364 1.9E-56 T 14-10-2018 BJD94_04240 575b919a20093b0acfa6c0763ce6fe0d 397 Pfam PF13439 Glycosyltransferase Family 4 18 172 7.6E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_04240 575b919a20093b0acfa6c0763ce6fe0d 397 SUPERFAMILY SSF53756 7 366 3.65E-64 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82693 565 674 1.78E-21 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82714 184 273 1.28E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82693 136 332 5.76E-22 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82866 808 1035 1.7E-43 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82693 39 132 8.89E-26 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82714 725 809 4.97E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 SUPERFAMILY SSF82866 299 500 3.27E-47 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 14-10-2018 BJD94_15600 e47580137bd380d1f7bd2bc7437c88a7 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 14-10-2018 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:2.30.22.10 142 198 2.1E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 Pfam PF01025 GrpE 36 198 2.8E-56 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 177 196 1.1E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 95 110 1.1E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 67 83 1.1E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 PRINTS PR00773 GrpE protein signature 150 165 1.1E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF51064 143 198 4.32E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 SUPERFAMILY SSF58014 44 142 6.28E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.591 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD94_08015 ab031b216163106bc4d02845b18cb827 198 Gene3D G3DSA:3.90.20.20 35 141 7.2E-33 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF46785 4 117 1.15E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:1.10.10.10 2 89 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 98 298 3.1E-57 T 14-10-2018 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF53850 96 300 1.99E-35 T 14-10-2018 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF03466 LysR substrate binding domain 95 299 2.8E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 168 269 3.1E-57 T 14-10-2018 BJD94_08310 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:3.30.70.100 165 236 9.6E-17 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 596 602 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 325 901 4.0E-183 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF55008 164 235 1.57E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 306 902 6.7E-184 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Pfam PF00403 Heavy-metal-associated domain 173 232 3.3E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Pfam PF00403 Heavy-metal-associated domain 5 60 1.5E-5 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 364 869 4.3E-89 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:2.70.150.20 380 496 1.3E-37 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:3.30.70.100 3 62 5.5E-6 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 608 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 728 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 815 827 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 749 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 442 456 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 792 811 5.6E-27 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Pfam PF00702 haloacid dehalogenase-like hydrolase 590 806 5.2E-44 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 310 329 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 183 197 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 382 400 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 577 592 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 769 786 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 PRINTS PR00943 Copper-transporting ATPase signature 515 529 7.8E-10 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF81653 395 492 4.84E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:3.40.1110.10 605 724 4.3E-92 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF55008 67 126 5.24E-6 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF55008 2 62 7.07E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF56784 592 898 9.49E-60 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 SUPERFAMILY SSF81665 353 588 5.62E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Pfam PF00122 E1-E2 ATPase 393 573 3.1E-50 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:3.30.70.100 66 126 8.4E-5 T 14-10-2018 BJD94_07375 a60dbf7d101480209cf8fc28a2ee1e54 910 Gene3D G3DSA:3.40.50.1000 575 844 4.3E-92 T 14-10-2018 IPR023214 HAD superfamily BJD94_00175 133a27298b42e3acc1ede2f8c2ae121c 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.5E-7 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00175 133a27298b42e3acc1ede2f8c2ae121c 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.995 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00175 133a27298b42e3acc1ede2f8c2ae121c 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00175 133a27298b42e3acc1ede2f8c2ae121c 41 SUPERFAMILY SSF57840 5 40 1.28E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00175 133a27298b42e3acc1ede2f8c2ae121c 41 Pfam PF00444 Ribosomal protein L36 1 40 1.2E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Gene3D G3DSA:3.90.190.20 326 484 2.1E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.7E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 417 8.5E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 SUPERFAMILY SSF53623 108 321 5.23E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 3.1E-187 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Gene3D G3DSA:3.40.1190.10 111 325 7.6E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Gene3D G3DSA:3.40.50.720 23 110 8.7E-34 T 14-10-2018 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.248 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 SUPERFAMILY SSF51984 16 109 4.45E-29 T 14-10-2018 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 Pfam PF08245 Mur ligase middle domain 127 307 1.4E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_08885 fe94cad7221eff563b60ab38737065aa 486 SUPERFAMILY SSF53244 326 474 5.68E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Gene3D G3DSA:3.40.50.970 1 184 3.4E-74 T 14-10-2018 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 SUPERFAMILY SSF52467 191 364 5.34E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 6.5E-274 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.0E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Gene3D G3DSA:3.40.50.1220 192 362 2.7E-61 T 14-10-2018 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 1.9E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 SUPERFAMILY SSF52518 2 181 2.27E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 4.4E-60 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 SUPERFAMILY SSF52518 373 567 5.33E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BJD94_09330 aad9b7ec42c2f49f7f6fc2a55982c966 574 Gene3D G3DSA:3.40.50.970 366 574 4.5E-66 T 14-10-2018 BJD94_00355 1d20d4c83ac4fcb2f3b87809a823f48a 255 SUPERFAMILY SSF53335 73 212 9.62E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_00355 1d20d4c83ac4fcb2f3b87809a823f48a 255 Gene3D G3DSA:3.40.50.150 53 188 6.1E-15 T 14-10-2018 BJD94_00355 1d20d4c83ac4fcb2f3b87809a823f48a 255 Pfam PF08241 Methyltransferase domain 74 125 2.9E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD94_12130 84b9cdf592fcbfa96925ed0af64758bd 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 3.5E-180 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_12130 84b9cdf592fcbfa96925ed0af64758bd 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.6E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_12130 84b9cdf592fcbfa96925ed0af64758bd 435 PIRSF PIRSF004539 1 435 1.1E-177 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 SMART SM00471 30 159 15.0 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 SMART SM00471 244 379 4.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 Gene3D G3DSA:1.10.3210.10 218 412 1.6E-49 T 14-10-2018 BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 SUPERFAMILY SSF109604 25 194 9.68E-14 T 14-10-2018 BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.8E-10 T 14-10-2018 IPR006675 HDIG domain BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 Pfam PF01966 HD domain 37 148 1.9E-5 T 14-10-2018 IPR006674 HD domain BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 Pfam PF01966 HD domain 248 369 7.2E-20 T 14-10-2018 IPR006674 HD domain BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 SUPERFAMILY SSF109604 241 404 1.38E-30 T 14-10-2018 BJD94_18410 75be9db731c8ed1711028413fde0aa39 441 Gene3D G3DSA:1.10.3210.10 20 197 1.1E-17 T 14-10-2018 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 259 9.0E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 326 6.1E-60 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 Gene3D G3DSA:2.40.50.100 48 188 3.0E-56 T 14-10-2018 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 Gene3D G3DSA:2.40.420.20 31 324 3.0E-56 T 14-10-2018 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 Gene3D G3DSA:1.10.287.470 86 153 3.0E-56 T 14-10-2018 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 Gene3D G3DSA:2.40.30.170 36 266 3.0E-56 T 14-10-2018 BJD94_21675 90bf46b9ab201bf2ec9e87a7757a14df 334 SUPERFAMILY SSF111369 39 267 9.29E-26 T 14-10-2018 BJD94_14570 71cd352d957b615305551ca1286ef9c3 495 SUPERFAMILY SSF52540 126 460 2.71E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14570 71cd352d957b615305551ca1286ef9c3 495 Pfam PF00437 Type II/IV secretion system protein 144 421 7.6E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_14570 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.30.450.380 23 239 7.3E-43 T 14-10-2018 BJD94_14570 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.40.50.300 240 459 4.5E-70 T 14-10-2018 BJD94_03100 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03100 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03100 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_03550 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03550 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03550 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_03465 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03465 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03465 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_03660 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03660 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03660 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_03445 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03445 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03445 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_07420 009e1d3e6adba19872eb8d816fe6d6bc 336 Gene3D G3DSA:3.30.420.10 125 295 2.3E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_07420 009e1d3e6adba19872eb8d816fe6d6bc 336 Pfam PF00665 Integrase core domain 128 244 3.6E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_07420 009e1d3e6adba19872eb8d816fe6d6bc 336 SUPERFAMILY SSF53098 128 298 7.46E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_21220 9a719d296ce4c52ea90dffd9e6822473 459 SUPERFAMILY SSF103473 18 449 1.96E-63 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_21220 9a719d296ce4c52ea90dffd9e6822473 459 Gene3D G3DSA:1.20.1250.20 242 443 4.2E-34 T 14-10-2018 BJD94_21220 9a719d296ce4c52ea90dffd9e6822473 459 Pfam PF07690 Major Facilitator Superfamily 36 392 9.9E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_21220 9a719d296ce4c52ea90dffd9e6822473 459 PIRSF PIRSF002808 13 454 2.1E-102 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BJD94_21220 9a719d296ce4c52ea90dffd9e6822473 459 Gene3D G3DSA:1.20.1250.20 21 219 9.2E-38 T 14-10-2018 BJD94_21325 cbf561423aae2353390538b7b89473db 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 7.8E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BJD94_21325 cbf561423aae2353390538b7b89473db 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BJD94_21325 cbf561423aae2353390538b7b89473db 483 SUPERFAMILY SSF54631 292 464 1.59E-21 T 14-10-2018 BJD94_21325 cbf561423aae2353390538b7b89473db 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 9.1E-114 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 BJD94_21325 cbf561423aae2353390538b7b89473db 483 Gene3D G3DSA:1.20.1080.10 4 270 1.0E-86 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_21325 cbf561423aae2353390538b7b89473db 483 Pfam PF01226 Formate/nitrite transporter 17 277 2.3E-70 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BJD94_21325 cbf561423aae2353390538b7b89473db 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BJD94_21325 cbf561423aae2353390538b7b89473db 483 Gene3D G3DSA:3.10.580.10 308 467 1.1E-21 T 14-10-2018 BJD94_21325 cbf561423aae2353390538b7b89473db 483 Pfam PF00571 CBS domain 313 364 6.8E-7 T 14-10-2018 IPR000644 CBS domain BJD94_21325 cbf561423aae2353390538b7b89473db 483 Pfam PF00571 CBS domain 382 464 0.0013 T 14-10-2018 IPR000644 CBS domain BJD94_21325 cbf561423aae2353390538b7b89473db 483 SMART SM00116 418 465 11.0 T 14-10-2018 IPR000644 CBS domain BJD94_21325 cbf561423aae2353390538b7b89473db 483 SMART SM00116 320 368 0.017 T 14-10-2018 IPR000644 CBS domain BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 SUPERFAMILY SSF50129 14 149 3.65E-34 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 SUPERFAMILY SSF51735 115 263 9.24E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 4.1E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 Pfam PF13602 Zinc-binding dehydrogenase 198 305 2.4E-6 T 14-10-2018 BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 Gene3D G3DSA:3.90.180.10 7 293 2.5E-117 T 14-10-2018 BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 SMART SM00829 11 310 5.6E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_20955 c213b8c8ba5d6b5fc18b104c254aaea4 313 Gene3D G3DSA:3.40.50.720 123 248 2.5E-117 T 14-10-2018 BJD94_02150 ba9ec14cf2d32c95f91fae38cdb98fe4 127 SUPERFAMILY SSF54593 5 124 8.25E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02150 ba9ec14cf2d32c95f91fae38cdb98fe4 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 4.3E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_02150 ba9ec14cf2d32c95f91fae38cdb98fe4 127 Gene3D G3DSA:3.10.180.10 8 126 1.3E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_10055 c75414b3e1b6ef3e86d9cc27ade91dfb 352 Gene3D G3DSA:3.40.50.2000 166 346 3.8E-59 T 14-10-2018 BJD94_10055 c75414b3e1b6ef3e86d9cc27ade91dfb 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 2.4E-72 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BJD94_10055 c75414b3e1b6ef3e86d9cc27ade91dfb 352 Gene3D G3DSA:3.40.50.2000 2 150 1.2E-55 T 14-10-2018 BJD94_10055 c75414b3e1b6ef3e86d9cc27ade91dfb 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 344 3.3E-149 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 BJD94_10055 c75414b3e1b6ef3e86d9cc27ade91dfb 352 SUPERFAMILY SSF53756 2 344 9.89E-99 T 14-10-2018 BJD94_18685 583b9ca825eaaa40995f41c607027475 457 Pfam PF13347 MFS/sugar transport protein 12 433 5.9E-94 T 14-10-2018 BJD94_18685 583b9ca825eaaa40995f41c607027475 457 SUPERFAMILY SSF103473 20 433 1.31E-29 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_18685 583b9ca825eaaa40995f41c607027475 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 439 2.0E-136 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 BJD94_18685 583b9ca825eaaa40995f41c607027475 457 Gene3D G3DSA:1.20.1250.20 12 429 6.8E-18 T 14-10-2018 BJD94_18685 583b9ca825eaaa40995f41c607027475 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 BJD94_08080 c39062ac33656c8ba55829c3c48ced4a 195 Pfam PF09335 SNARE associated Golgi protein 36 144 2.2E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Gene3D G3DSA:3.40.50.300 210 372 1.8E-47 T 14-10-2018 BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 SUPERFAMILY SSF52540 72 358 2.52E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Gene3D G3DSA:3.30.70.330 385 458 1.6E-17 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Pfam PF00270 DEAD/DEAH box helicase 27 193 1.0E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Pfam PF03880 DbpA RNA binding domain 385 455 1.1E-19 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Gene3D G3DSA:3.40.50.300 2 209 2.3E-72 T 14-10-2018 BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 SMART SM00490 256 337 2.3E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 Pfam PF00271 Helicase conserved C-terminal domain 230 337 2.0E-28 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_20865 cb85c6e6f330a941877de3683dd89866 459 SMART SM00487 22 219 6.0E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_06135 2b352bc1c8c0159a06ed56dfb8e2f984 192 PIRSF PIRSF006102 1 192 6.1E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_06135 2b352bc1c8c0159a06ed56dfb8e2f984 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.9E-89 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 BJD94_06135 2b352bc1c8c0159a06ed56dfb8e2f984 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 6.1E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_06135 2b352bc1c8c0159a06ed56dfb8e2f984 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.213 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 BJD94_19290 a2ed56bb9c787038cdb5c8444bae807a 249 SMART SM00481 5 79 1.3E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD94_19290 a2ed56bb9c787038cdb5c8444bae807a 249 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 53.823 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 BJD94_19290 a2ed56bb9c787038cdb5c8444bae807a 249 SUPERFAMILY SSF89550 4 243 1.28E-59 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BJD94_19290 a2ed56bb9c787038cdb5c8444bae807a 249 Gene3D G3DSA:3.20.20.140 3 247 7.5E-61 T 14-10-2018 BJD94_13780 b27ec7a8154fe5f49d8cd303b8e5d077 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 10 240 8.3E-76 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD94_13780 b27ec7a8154fe5f49d8cd303b8e5d077 255 SUPERFAMILY SSF64167 9 253 3.53E-87 T 14-10-2018 BJD94_13780 b27ec7a8154fe5f49d8cd303b8e5d077 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 9 255 41.222 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD94_13780 b27ec7a8154fe5f49d8cd303b8e5d077 255 Gene3D G3DSA:3.40.1210.10 1 255 8.1E-98 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD94_13780 b27ec7a8154fe5f49d8cd303b8e5d077 255 Pfam PF01975 Survival protein SurE 11 189 8.7E-62 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Gene3D G3DSA:3.30.70.270 73 173 3.7E-38 T 14-10-2018 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Gene3D G3DSA:1.10.150.20 174 232 1.1E-14 T 14-10-2018 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 SUPERFAMILY SSF56672 4 238 4.54E-94 T 14-10-2018 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 SUPERFAMILY SSF100879 245 353 2.94E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 3.0E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.462 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Gene3D G3DSA:2.30.40.20 15 72 4.3E-28 T 14-10-2018 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Pfam PF00817 impB/mucB/samB family 11 158 2.2E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD94_00120 c7ad9562b024b6582e93543aecc48772 354 Gene3D G3DSA:3.30.1490.100 241 354 5.5E-25 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 SMART SM00421 208 265 3.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 253 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 225 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 241 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 Pfam PF00196 Bacterial regulatory proteins, luxR family 210 264 3.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 Gene3D G3DSA:1.10.10.10 207 268 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16815 195e4ec84ca6bff8e088bb7391e4b454 274 SUPERFAMILY SSF46894 204 268 1.02E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 1.4E-116 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 SUPERFAMILY SSF53383 21 388 2.55E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 2.5E-171 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 Gene3D G3DSA:3.40.640.10 3 255 1.6E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 Gene3D G3DSA:3.90.1150.10 256 390 2.5E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05155 76c71c146a399c1ae414d6dfb1077f6d 402 PIRSF PIRSF001434 1 391 2.4E-124 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD94_21080 bd850ce1270bde986204326edcbb2ccd 145 Gene3D G3DSA:1.20.1290.10 1 145 1.0E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD94_21080 bd850ce1270bde986204326edcbb2ccd 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 93 7.8E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD94_21080 bd850ce1270bde986204326edcbb2ccd 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 9.0E-16 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD94_21080 bd850ce1270bde986204326edcbb2ccd 145 SUPERFAMILY SSF69118 5 144 1.54E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD94_19545 2bd4b0e4c1339e63890f22be48bf3885 127 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 3.9E-40 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 BJD94_19545 2bd4b0e4c1339e63890f22be48bf3885 127 PIRSF PIRSF028770 1 127 1.5E-72 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 SUPERFAMILY SSF100920 384 537 4.58E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.4E-266 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Gene3D G3DSA:3.90.640.10 238 311 5.1E-111 T 14-10-2018 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Pfam PF00012 Hsp70 protein 22 601 1.4E-187 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Gene3D G3DSA:2.60.34.10 379 519 7.9E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 SUPERFAMILY SSF53067 20 196 2.59E-50 T 14-10-2018 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Gene3D G3DSA:3.30.420.40 23 374 5.1E-111 T 14-10-2018 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 SUPERFAMILY SSF53067 200 377 4.57E-49 T 14-10-2018 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Gene3D G3DSA:1.20.1270.10 520 616 6.8E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 SUPERFAMILY SSF100934 504 615 6.08E-34 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.307 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BJD94_08215 2c0e8d14871f9fe6f463cd552316058a 617 Gene3D G3DSA:3.30.420.40 194 361 5.1E-111 T 14-10-2018 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Gene3D G3DSA:3.90.1570.50 104 261 1.3E-29 T 14-10-2018 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Gene3D G3DSA:3.40.50.300 487 732 1.7E-47 T 14-10-2018 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Pfam PF11867 Domain of unknown function (DUF3387) 721 1050 2.8E-118 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 212 1.5E-43 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 3 723 2.8E-183 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Pfam PF04851 Type III restriction enzyme, res subunit 277 468 3.8E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 SMART SM00487 264 501 6.7E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 SUPERFAMILY SSF52540 421 704 1.24E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 SUPERFAMILY SSF52540 232 526 6.01E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01660 9ab9232eadc2991cd430fe7d0d9bc7fe 1054 Gene3D G3DSA:3.40.50.300 280 486 7.9E-44 T 14-10-2018 BJD94_21810 772758111cb7100fe3fc1033020b362c 107 SUPERFAMILY SSF50022 2 106 1.19E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_21810 772758111cb7100fe3fc1033020b362c 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 6.8E-36 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD94_21810 772758111cb7100fe3fc1033020b362c 107 Gene3D G3DSA:2.102.10.10 1 107 4.6E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_21810 772758111cb7100fe3fc1033020b362c 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Gene3D G3DSA:3.40.50.300 348 544 6.4E-67 T 14-10-2018 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Gene3D G3DSA:3.40.50.300 550 764 9.1E-90 T 14-10-2018 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.2E-11 T 14-10-2018 IPR004176 Clp, N-terminal BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.5E-13 T 14-10-2018 IPR004176 Clp, N-terminal BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Gene3D G3DSA:1.10.8.60 766 857 6.1E-26 T 14-10-2018 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SUPERFAMILY SSF81923 4 156 4.05E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 3.2E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Gene3D G3DSA:3.40.50.300 158 347 4.5E-75 T 14-10-2018 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SMART SM00382 198 344 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SMART SM00382 597 748 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.0E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SUPERFAMILY SSF52540 546 854 8.7E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Gene3D G3DSA:1.10.1780.10 1 148 4.9E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SMART SM01086 766 855 7.2E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 9.4E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_08425 9fe9c7fc86ad5d8144c94c158f65122d 857 SUPERFAMILY SSF52540 159 545 1.78E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SUPERFAMILY SSF52172 452 568 2.28E-33 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SMART SM00388 207 272 5.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Gene3D G3DSA:3.30.565.10 271 433 9.9E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 429 4.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SMART SM00448 453 564 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SMART SM00387 319 430 9.9E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 3.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Gene3D G3DSA:1.10.287.130 181 270 1.8E-21 T 14-10-2018 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Gene3D G3DSA:3.40.50.2300 436 567 1.4E-35 T 14-10-2018 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SUPERFAMILY SSF55874 261 431 5.63E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 SUPERFAMILY SSF47384 195 272 1.41E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02010 498eff38b42ef7c095f86adb84da059d 572 Pfam PF00072 Response regulator receiver domain 455 560 3.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 Gene3D G3DSA:3.30.420.40 379 433 2.0E-12 T 14-10-2018 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 SUPERFAMILY SSF53067 208 447 3.52E-33 T 14-10-2018 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 Gene3D G3DSA:3.90.640.10 335 378 2.0E-12 T 14-10-2018 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 Pfam PF00012 Hsp70 protein 129 259 1.5E-11 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_20380 80684b2ce7b5e339b22ce06e011985fd 450 SUPERFAMILY SSF53067 1 204 3.89E-26 T 14-10-2018 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 Gene3D G3DSA:3.90.190.20 288 421 1.1E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 SUPERFAMILY SSF53623 15 285 4.32E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 PIRSF PIRSF001563 6 421 2.3E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 1.4E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 414 1.9E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 SUPERFAMILY SSF53244 287 415 3.97E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 Gene3D G3DSA:3.40.1190.10 1 287 2.9E-90 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_00875 7cc180905d384a152a69fef351fd4920 421 Pfam PF08245 Mur ligase middle domain 54 193 2.6E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_02425 1d2788ddace7eeda9ef745719e92351a 280 SUPERFAMILY SSF158855 33 278 3.66E-55 T 14-10-2018 BJD94_02425 1d2788ddace7eeda9ef745719e92351a 280 Pfam PF03280 Proteobacterial lipase chaperone protein 86 267 1.1E-43 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Gene3D G3DSA:1.10.287.950 374 705 7.8E-70 T 14-10-2018 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 513 671 3.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 SMART SM00304 374 428 2.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Gene3D G3DSA:3.30.450.20 64 331 1.9E-27 T 14-10-2018 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Gene3D G3DSA:3.30.450.20 73 233 1.9E-27 T 14-10-2018 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Pfam PF00672 HAMP domain 376 425 3.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 SMART SM00283 443 704 4.8E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 Pfam PF02743 Cache domain 50 324 2.7E-14 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_01260 7d3bbc84afeb3c882071a658efd505e4 705 SUPERFAMILY SSF58104 396 705 7.06E-74 T 14-10-2018 BJD94_00450 13bb6701c9ca5b9f3640dcc261d84c4d 116 SUPERFAMILY SSF52833 2 116 5.13E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_00450 13bb6701c9ca5b9f3640dcc261d84c4d 116 Gene3D G3DSA:3.40.30.10 1 116 6.2E-48 T 14-10-2018 BJD94_00450 13bb6701c9ca5b9f3640dcc261d84c4d 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 5.8E-47 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 BJD94_00450 13bb6701c9ca5b9f3640dcc261d84c4d 116 Pfam PF03960 ArsC family 6 115 1.0E-19 T 14-10-2018 IPR006660 Arsenate reductase-like BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 Gene3D G3DSA:2.40.100.10 18 181 5.7E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 PIRSF PIRSF001467 5 179 2.0E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 4.3E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_00055 d5bc74842a6b586c7fc64990b2eb38ac 181 SUPERFAMILY SSF50891 19 180 5.26E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 Gene3D G3DSA:2.40.100.10 18 181 5.7E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 PIRSF PIRSF001467 5 179 2.0E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 4.3E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_14835 d5bc74842a6b586c7fc64990b2eb38ac 181 SUPERFAMILY SSF50891 19 180 5.26E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 Gene3D G3DSA:3.40.190.10 168 267 1.3E-49 T 14-10-2018 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 Gene3D G3DSA:1.10.10.10 1 86 3.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 SUPERFAMILY SSF46785 2 84 2.8E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 Pfam PF03466 LysR substrate binding domain 91 291 2.3E-20 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 SUPERFAMILY SSF53850 88 292 1.07E-37 T 14-10-2018 BJD94_16340 bb2f5d0736e8c2920f04755419b574ab 313 Gene3D G3DSA:3.40.190.10 90 291 1.3E-49 T 14-10-2018 BJD94_11765 e5854bf53e0f8cc266e45eb7e5b33f77 213 Gene3D G3DSA:1.10.10.60 4 55 2.8E-23 T 14-10-2018 BJD94_11765 e5854bf53e0f8cc266e45eb7e5b33f77 213 SUPERFAMILY SSF46689 5 80 2.13E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_11765 e5854bf53e0f8cc266e45eb7e5b33f77 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_11765 e5854bf53e0f8cc266e45eb7e5b33f77 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD94_11765 e5854bf53e0f8cc266e45eb7e5b33f77 213 Gene3D G3DSA:1.10.357.10 56 210 1.1E-34 T 14-10-2018 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 SMART SM00342 171 253 1.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 SUPERFAMILY SSF46689 154 206 3.11E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 SUPERFAMILY SSF46689 207 252 3.49E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 Gene3D G3DSA:1.10.10.60 156 213 1.4E-10 T 14-10-2018 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 Gene3D G3DSA:1.10.10.60 214 259 3.4E-10 T 14-10-2018 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 Pfam PF12833 Helix-turn-helix domain 177 252 4.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 SUPERFAMILY SSF51182 29 120 2.34E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_17180 5e4d27dff8989f29863267a82680c149 259 Gene3D G3DSA:2.60.120.10 6 87 3.3E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_17180 5e4d27dff8989f29863267a82680c149 259 Pfam PF02311 AraC-like ligand binding domain 19 95 8.0E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BJD94_17180 5e4d27dff8989f29863267a82680c149 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_13535 bc3aab3052b44ab08240ac5e27e7ce49 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 2.9E-27 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 SUPERFAMILY SSF48019 243 362 4.08E-33 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Gene3D G3DSA:1.10.8.60 8 240 8.3E-102 T 14-10-2018 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Gene3D G3DSA:1.20.272.10 242 361 2.5E-40 T 14-10-2018 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Gene3D G3DSA:3.40.50.300 13 177 8.3E-102 T 14-10-2018 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Gene3D G3DSA:3.30.300.150 574 712 5.2E-41 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.2E-132 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 SMART SM00382 37 179 2.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 SUPERFAMILY SSF52540 34 222 1.03E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.2E-44 T 14-10-2018 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 515 587 8.2E-21 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 8.4E-32 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BJD94_00910 d09805c5cd4df79d66ac767a5e79a639 730 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 589 727 1.9E-50 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_03220 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:3.40.1620.10 1 40 2.7E-8 T 14-10-2018 BJD94_03220 8146b3f13c6d78a1ae4c15e337eac11d 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 1.9E-7 T 14-10-2018 BJD94_03220 8146b3f13c6d78a1ae4c15e337eac11d 84 SUPERFAMILY SSF143120 1 81 1.27E-23 T 14-10-2018 IPR036165 YefM-like superfamily BJD94_03220 8146b3f13c6d78a1ae4c15e337eac11d 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-21 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD94_03220 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:1.10.1220.170 41 84 2.5E-13 T 14-10-2018 BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 53.749 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 9.9E-33 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 SUPERFAMILY SSF51735 42 148 6.67E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 4.9E-25 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 320 6.4E-96 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_21460 b5b603ec70e354b9a8e02c74695774c1 400 Gene3D G3DSA:3.40.50.720 1 398 4.9E-163 T 14-10-2018 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 SUPERFAMILY SSF53822 63 308 1.24E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_07710 dde967eac9cecf505e25515e11422a21 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 Gene3D G3DSA:3.40.50.2300 68 303 3.1E-63 T 14-10-2018 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 SMART SM00354 4 74 2.0E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 Gene3D G3DSA:1.10.260.40 2 60 1.3E-19 T 14-10-2018 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 SUPERFAMILY SSF47413 3 60 2.51E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 Gene3D G3DSA:3.40.50.2300 163 279 3.1E-63 T 14-10-2018 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 4.0E-19 T 14-10-2018 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 3.3E-133 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 BJD94_07710 dde967eac9cecf505e25515e11422a21 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Pfam PF07196 Flagellin hook IN motif 193 235 1.7E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Pfam PF00669 Bacterial flagellin N-terminal helical region 2 130 8.8E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 PRINTS PR00207 Flagellin signature 26 43 2.8E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 PRINTS PR00207 Flagellin signature 100 123 2.8E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 PRINTS PR00207 Flagellin signature 65 84 2.8E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Pfam PF00700 Bacterial flagellin C-terminal helical region 282 365 4.6E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Gene3D G3DSA:1.20.1330.10 33 316 2.0E-78 T 14-10-2018 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 SUPERFAMILY SSF64518 2 365 4.58E-92 T 14-10-2018 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Gene3D G3DSA:1.10.8.410 317 365 4.7E-18 T 14-10-2018 BJD94_00535 61bbf12eb0e003b462bc01fa9f961438 366 Gene3D G3DSA:3.30.70.2120 163 264 2.0E-78 T 14-10-2018 BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 Gene3D G3DSA:3.40.190.10 109 201 5.0E-74 T 14-10-2018 BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.6E-80 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.1E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 Gene3D G3DSA:3.40.190.10 26 240 5.0E-74 T 14-10-2018 BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 SMART SM00062 22 243 5.6E-72 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_16550 a92262e399e46a06a96e04fc80b261bf 243 SUPERFAMILY SSF53850 1 242 6.29E-66 T 14-10-2018 BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 Pfam PF00563 EAL domain 74 194 8.2E-12 T 14-10-2018 IPR001633 EAL domain BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 Pfam PF08668 HDOD domain 207 324 1.0E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 SUPERFAMILY SSF109604 185 404 1.1E-41 T 14-10-2018 BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 Gene3D G3DSA:1.10.3210.10 204 389 1.7E-23 T 14-10-2018 BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 PIRSF PIRSF003180 1 407 3.6E-171 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 SMART SM00052 2 199 3.7E-4 T 14-10-2018 IPR001633 EAL domain BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 SUPERFAMILY SSF141868 4 198 3.01E-28 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11635 71cdd132fa07d7ec6a05e7ac16527ff1 407 Gene3D G3DSA:3.20.20.450 45 203 2.5E-18 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SUPERFAMILY SSF55785 470 593 8.38E-19 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SUPERFAMILY SSF141868 786 1034 9.81E-69 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Pfam PF13426 PAS domain 496 594 9.5E-9 T 14-10-2018 IPR000014 PAS domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SMART SM00091 360 426 15.0 T 14-10-2018 IPR000014 PAS domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SMART SM00091 485 555 0.012 T 14-10-2018 IPR000014 PAS domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.40.50.2300 131 252 4.0E-5 T 14-10-2018 BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.30.450.20 486 597 2.1E-18 T 14-10-2018 BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SMART SM00052 780 1027 5.3E-57 T 14-10-2018 IPR001633 EAL domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.30.70.270 598 768 3.4E-46 T 14-10-2018 BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 603 767 2.1E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.30.450.20 346 485 1.8E-9 T 14-10-2018 BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SMART SM00267 596 768 6.0E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.40.50.2300 73 271 4.0E-5 T 14-10-2018 BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 483 603 7.9E-15 T 14-10-2018 IPR000014 PAS domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Pfam PF00990 Diguanylate cyclase, GGDEF domain 607 764 2.1E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Gene3D G3DSA:3.20.20.450 769 1029 4.0E-76 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SUPERFAMILY SSF55785 348 471 3.49E-8 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 Pfam PF00563 EAL domain 788 1022 1.2E-55 T 14-10-2018 IPR001633 EAL domain BJD94_11500 bdcf480be37f006ac3ecf288dd52b0c2 1042 SUPERFAMILY SSF55073 612 768 4.0E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 5.6E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF54292 1 104 1.78E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF46548 105 233 8.72E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 2.8E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 14-10-2018 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:1.10.1060.10 105 236 8.6E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:3.10.20.30 1 104 6.0E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_06970 2d18228f54f593bc4b03cce3d413cd04 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 Gene3D G3DSA:3.90.110.10 171 439 3.8E-98 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 SUPERFAMILY SSF56327 173 436 7.2E-92 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 4.9E-60 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.4E-48 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 Gene3D G3DSA:3.40.50.720 1 170 1.5E-65 T 14-10-2018 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 SUPERFAMILY SSF51735 5 170 3.69E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_13305 a8fab2ef209a0037e965d810fcc98ebe 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 SUPERFAMILY SSF81345 352 665 2.22E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 SUPERFAMILY SSF81345 17 336 6.02E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 Pfam PF01032 FecCD transport family 369 665 7.1E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 Pfam PF01032 FecCD transport family 28 336 4.9E-73 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 Gene3D G3DSA:1.10.3470.10 354 665 1.2E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_17470 c4732874fc48fbfa0041485e6e0d5d1b 665 Gene3D G3DSA:1.10.3470.10 13 341 2.4E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 SUPERFAMILY SSF46767 74 154 3.66E-34 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 154 5.1E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 4.9E-40 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 SUPERFAMILY SSF53155 3 80 8.44E-20 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 43.239 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 71 1.9E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 Gene3D G3DSA:3.30.160.70 1 70 5.3E-19 T 14-10-2018 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD94_18115 992b7cc817fb63dc5ecc227b2bf7403c 161 Gene3D G3DSA:1.10.10.10 74 158 5.3E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PIRSF PIRSF500210 1 336 8.6E-128 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.4E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.0E-77 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.993 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 Gene3D G3DSA:3.30.540.10 4 198 4.6E-76 T 14-10-2018 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 SUPERFAMILY SSF56655 3 331 2.11E-114 T 14-10-2018 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 Gene3D G3DSA:3.40.190.80 200 336 1.2E-59 T 14-10-2018 BJD94_09615 51e3b05a71c64cbe3c3934b515aba7eb 338 PIRSF PIRSF000904 1 337 2.8E-125 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 Gene3D G3DSA:3.30.70.270 162 341 2.1E-39 T 14-10-2018 BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 SUPERFAMILY SSF141868 343 589 1.57E-86 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 SMART SM00052 338 583 1.6E-103 T 14-10-2018 IPR001633 EAL domain BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 323 5.9E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 Pfam PF00563 EAL domain 344 578 1.3E-68 T 14-10-2018 IPR001633 EAL domain BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 SUPERFAMILY SSF55073 172 330 1.88E-34 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 326 2.1E-27 T 14-10-2018 IPR000160 GGDEF domain BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 Gene3D G3DSA:3.20.20.450 342 590 4.4E-94 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15830 637abb8097421c3161a8910c4f0629a1 591 SMART SM00267 154 328 1.3E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_05885 410b3d7671da23869e61d86409b502ae 170 SUPERFAMILY SSF55021 89 167 6.11E-10 T 14-10-2018 BJD94_05885 410b3d7671da23869e61d86409b502ae 170 Gene3D G3DSA:3.30.70.260 84 170 7.1E-13 T 14-10-2018 BJD94_05885 410b3d7671da23869e61d86409b502ae 170 Pfam PF13740 ACT domain 5 66 1.6E-9 T 14-10-2018 BJD94_05885 410b3d7671da23869e61d86409b502ae 170 PIRSF PIRSF028103 1 169 1.5E-41 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.90.480.20 554 639 3.0E-5 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 1.2E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 3.1E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 773 3.2E-13 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.9E-15 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.9E-15 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.9E-15 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.9E-15 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.9E-15 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF51905 3 187 1.71E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF56014 634 809 1.57E-45 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 623 2.9E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.30.413.10 640 745 5.9E-22 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.50.50.60 110 246 1.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF55124 503 629 3.11E-31 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF51905 144 311 2.35E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 7.2E-11 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 7.2E-11 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.2E-11 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 7.2E-11 T 14-10-2018 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.50.50.60 7 283 1.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BJD94_21815 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:1.10.10.1100 424 478 3.1E-12 T 14-10-2018 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 SUPERFAMILY SSF88697 4 73 2.13E-17 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 Gene3D G3DSA:3.30.750.80 73 180 2.1E-36 T 14-10-2018 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 SMART SM00359 3 87 9.1E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 Gene3D G3DSA:2.30.130.10 1 72 2.4E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 SUPERFAMILY SSF53335 78 393 1.59E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.62 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 Gene3D G3DSA:3.40.50.150 181 396 3.5E-69 T 14-10-2018 BJD94_04460 be08bb32bd58e8b581b0b50b05b1f63f 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 1.9E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 SUPERFAMILY SSF51182 10 388 1.27E-96 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 2.4E-61 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 1.3E-89 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 Pfam PF01238 Phosphomannose isomerase type I 12 364 6.6E-77 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 Gene3D G3DSA:2.60.120.10 16 287 2.6E-124 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 Gene3D G3DSA:1.10.441.10 159 312 2.6E-124 T 14-10-2018 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 PIRSF PIRSF001480 8 403 9.8E-105 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_16210 141693a6c1ba2b740b3aa63121d016bd 403 Gene3D G3DSA:2.60.120.10 313 395 2.6E-124 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 Gene3D G3DSA:1.10.10.10 148 211 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 SMART SM00421 152 209 2.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 2.5E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 SUPERFAMILY SSF46894 151 210 6.8E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 Gene3D G3DSA:3.40.50.2300 26 139 2.6E-8 T 14-10-2018 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04590 3f1d486331b6b59aa3754532dd896e02 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_03930 b45869ce35d3d60327e9cdf79330f9e2 406 Pfam PF00909 Ammonium Transporter Family 23 399 2.1E-88 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BJD94_03930 b45869ce35d3d60327e9cdf79330f9e2 406 Gene3D G3DSA:1.10.3430.10 1 406 1.3E-102 T 14-10-2018 IPR029020 Ammonium/urea transporter BJD94_03930 b45869ce35d3d60327e9cdf79330f9e2 406 SUPERFAMILY SSF111352 17 384 6.02E-97 T 14-10-2018 BJD94_03930 b45869ce35d3d60327e9cdf79330f9e2 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BJD94_10805 eb2ff61a23348412a54212a02a4b2633 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD94_10805 eb2ff61a23348412a54212a02a4b2633 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 345 1.8E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD94_10805 eb2ff61a23348412a54212a02a4b2633 386 Pfam PF07690 Major Facilitator Superfamily 5 341 4.4E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_10805 eb2ff61a23348412a54212a02a4b2633 386 Gene3D G3DSA:1.20.1720.10 1 373 1.7E-89 T 14-10-2018 BJD94_10805 eb2ff61a23348412a54212a02a4b2633 386 SUPERFAMILY SSF103473 2 368 2.22E-58 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 SMART SM00387 485 593 3.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Gene3D G3DSA:3.30.450.20 48 265 2.5E-59 T 14-10-2018 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Gene3D G3DSA:3.30.450.20 59 176 2.5E-59 T 14-10-2018 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Gene3D G3DSA:1.10.287.130 349 436 1.0E-14 T 14-10-2018 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 SMART SM00388 373 441 0.002 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Gene3D G3DSA:3.30.565.10 447 592 3.2E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 SUPERFAMILY SSF55874 443 594 1.44E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 591 4.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 PIRSF PIRSF036431 2 600 1.4E-175 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 SUPERFAMILY SSF47384 358 439 2.75E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 SUPERFAMILY SSF103190 54 184 6.87E-21 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_17760 29bad9e47e82da6e8dec344ca637ad1f 603 Pfam PF02743 Cache domain 43 218 8.4E-14 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 SUPERFAMILY SSF53720 19 481 7.98E-112 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 PIRSF PIRSF036492 12 491 3.8E-150 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 Pfam PF00171 Aldehyde dehydrogenase family 15 456 1.3E-85 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 Gene3D G3DSA:3.40.309.10 238 436 8.0E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_01425 910b313fd4d64648e447c54c465ce046 494 Gene3D G3DSA:3.40.605.10 38 456 8.0E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 Gene3D G3DSA:2.30.30.30 2 104 1.4E-39 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 Pfam PF00467 KOW motif 8 37 1.4E-5 T 14-10-2018 IPR005824 KOW BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.866 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 SUPERFAMILY SSF50104 4 101 1.33E-33 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.0E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.9E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09825 269d1f7fa579b0248f6b69f1634b4d7d 105 SMART SM00739 4 31 3.4E-4 T 14-10-2018 IPR005824 KOW BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 PIRSF PIRSF000484 1 399 6.3E-73 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.536 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 2.7E-156 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 SUPERFAMILY SSF51690 129 410 2.55E-86 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 Gene3D G3DSA:3.20.140.10 2 427 1.5E-165 T 14-10-2018 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 SUPERFAMILY SSF54675 8 147 3.73E-35 T 14-10-2018 BJD94_02515 1d9b8cf9b149babfb2576627436dc627 437 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 411 1.1E-77 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 6.7E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Pfam PF01434 Peptidase family M41 383 592 4.2E-81 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 SUPERFAMILY SSF140990 403 598 4.84E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 SUPERFAMILY SSF52540 144 392 1.2E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Pfam PF06480 FtsH Extracellular 5 93 4.5E-12 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 625 37.213 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Gene3D G3DSA:1.20.58.760 403 605 4.3E-72 T 14-10-2018 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 SMART SM00382 185 324 3.6E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 1.0E-241 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Gene3D G3DSA:3.40.50.300 137 323 9.8E-70 T 14-10-2018 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Gene3D G3DSA:1.10.8.60 324 400 2.1E-27 T 14-10-2018 BJD94_14285 e189c25e713d3a7b1293c49dfcd9a1b7 650 Gene3D G3DSA:2.40.50.920 24 100 2.0E-29 T 14-10-2018 BJD94_12895 802fd7f149c74399a4f3525e0fc74a7d 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.2E-25 T 14-10-2018 IPR014318 Phage shock protein, PspG BJD94_12895 802fd7f149c74399a4f3525e0fc74a7d 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 8.4E-25 T 14-10-2018 IPR014318 Phage shock protein, PspG BJD94_14975 9532bf83909ab8658e8a50a4ed91f0d3 302 Pfam PF01738 Dienelactone hydrolase family 91 299 1.8E-47 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BJD94_14975 9532bf83909ab8658e8a50a4ed91f0d3 302 Gene3D G3DSA:3.40.50.1820 63 300 9.0E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_14975 9532bf83909ab8658e8a50a4ed91f0d3 302 SUPERFAMILY SSF53474 78 300 1.03E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_03840 229c864788ae6a2f550cf85819503c87 677 SMART SM00388 445 512 9.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 8.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 8.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 8.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 8.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 SUPERFAMILY SSF55874 502 664 8.12E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_03840 229c864788ae6a2f550cf85819503c87 677 SUPERFAMILY SSF47384 440 509 4.32E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 Pfam PF17202 Single cache domain 3 201 314 4.7E-26 T 14-10-2018 IPR033463 Single cache domain 3 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 2.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 Gene3D G3DSA:1.10.287.130 437 510 4.1E-21 T 14-10-2018 BJD94_03840 229c864788ae6a2f550cf85819503c87 677 Gene3D G3DSA:3.30.565.10 519 673 8.8E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_03840 229c864788ae6a2f550cf85819503c87 677 SMART SM00387 555 666 2.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_03840 229c864788ae6a2f550cf85819503c87 677 SUPERFAMILY SSF103190 145 307 3.77E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_03840 229c864788ae6a2f550cf85819503c87 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_09690 8d4923533c12524cbdd324b9e8bf6831 207 Gene3D G3DSA:3.40.50.300 9 206 3.1E-79 T 14-10-2018 BJD94_09690 8d4923533c12524cbdd324b9e8bf6831 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 3.3E-83 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BJD94_09690 8d4923533c12524cbdd324b9e8bf6831 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.263 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BJD94_09690 8d4923533c12524cbdd324b9e8bf6831 207 Pfam PF01583 Adenylylsulphate kinase 31 182 1.1E-71 T 14-10-2018 BJD94_09690 8d4923533c12524cbdd324b9e8bf6831 207 SUPERFAMILY SSF52540 25 198 5.31E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19210 5cbe3172d6e91377b33f3393c7b56321 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 4.6E-31 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 BJD94_19210 5cbe3172d6e91377b33f3393c7b56321 118 Gene3D G3DSA:3.30.1370.150 59 118 8.3E-30 T 14-10-2018 BJD94_06820 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 4.8E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BJD94_06820 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF07670 Nucleoside recognition 87 182 2.6E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_06820 fe2ef9f65be6ebac093b9c36ddd9f223 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 395 7.1E-137 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BJD94_06820 fe2ef9f65be6ebac093b9c36ddd9f223 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 2.6E-72 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BJD94_01155 378457518a4bf463d88e6fbc0a957b0b 317 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 310 37.981 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD94_01155 378457518a4bf463d88e6fbc0a957b0b 317 SUPERFAMILY SSF52540 32 180 1.52E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01155 378457518a4bf463d88e6fbc0a957b0b 317 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 5 309 7.9E-92 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD94_01155 378457518a4bf463d88e6fbc0a957b0b 317 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 1 305 6.8E-110 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 SUPERFAMILY SSF50249 40 124 1.37E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 Pfam PF00575 S1 RNA binding domain 37 118 1.3E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 Gene3D G3DSA:2.40.50.140 32 125 5.5E-32 T 14-10-2018 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 SMART SM00316 37 119 2.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 Hamap MF_00970 Ribonuclease E [rne]. 1 1027 35.469 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 Gene3D G3DSA:3.40.1260.20 400 508 1.1E-38 T 14-10-2018 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 6.8E-171 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BJD94_05755 5010c77d15f4866b7bfc3a8a1b33855e 1040 Pfam PF10150 Ribonuclease E/G family 121 390 5.3E-95 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BJD94_13230 c46590f484ea1ae1c1debb5abc22854c 164 SUPERFAMILY SSF55729 5 163 9.43E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_13230 c46590f484ea1ae1c1debb5abc22854c 164 Gene3D G3DSA:3.40.630.30 6 164 3.8E-23 T 14-10-2018 BJD94_13230 c46590f484ea1ae1c1debb5abc22854c 164 Pfam PF00583 Acetyltransferase (GNAT) family 43 141 4.9E-13 T 14-10-2018 IPR000182 GNAT domain BJD94_04995 e43333b6fb31598e6459ff826fd3781e 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.567 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_04995 e43333b6fb31598e6459ff826fd3781e 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 4.2E-189 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_04995 e43333b6fb31598e6459ff826fd3781e 389 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.8E-145 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_04995 e43333b6fb31598e6459ff826fd3781e 389 Gene3D G3DSA:1.20.1530.10 3 381 4.0E-148 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily BJD94_21205 8b1530ca256970a6c9e1fc2f3bd451e4 184 SUPERFAMILY SSF55174 18 92 4.56E-17 T 14-10-2018 BJD94_21205 8b1530ca256970a6c9e1fc2f3bd451e4 184 Pfam PF13275 S4 domain 29 91 5.5E-22 T 14-10-2018 BJD94_21205 8b1530ca256970a6c9e1fc2f3bd451e4 184 Gene3D G3DSA:3.10.290.10 20 93 8.0E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 4.6E-199 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 SUPERFAMILY SSF55021 248 343 1.12E-26 T 14-10-2018 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 SUPERFAMILY SSF52540 1 239 1.23E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 Pfam PF00005 ABC transporter 21 169 3.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 Gene3D G3DSA:3.40.50.300 1 232 2.8E-75 T 14-10-2018 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 SMART SM00382 30 235 2.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 Pfam PF09383 NIL domain 268 339 2.0E-21 T 14-10-2018 IPR018449 NIL domain BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 Gene3D G3DSA:3.30.70.260 244 344 3.5E-41 T 14-10-2018 BJD94_07720 3f32781c9130dd91aa92bf35cab9162f 344 SMART SM00930 265 340 1.5E-29 T 14-10-2018 IPR018449 NIL domain BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 7.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 7.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 Gene3D G3DSA:3.40.50.720 1 257 5.2E-41 T 14-10-2018 BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 SUPERFAMILY SSF51735 6 257 1.45E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10075 2bfd0899468ff7f1285bc798fae46786 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 5.6E-30 T 14-10-2018 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 SUPERFAMILY SSF46589 1 114 2.2E-26 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 2.1E-170 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 PIRSF PIRSF001529 1 435 2.5E-185 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 Gene3D G3DSA:3.30.930.10 107 434 4.9E-113 T 14-10-2018 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 SUPERFAMILY SSF55681 118 429 1.49E-97 T 14-10-2018 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 4.7E-28 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 1.5E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.862 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD94_05500 c6e1e7a66da89a40dd6ac0becc0e7b53 435 Gene3D G3DSA:1.10.287.40 1 106 6.0E-20 T 14-10-2018 BJD94_07595 431312bbdd038f698af3d1d7895783d9 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.5E-37 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD94_07595 431312bbdd038f698af3d1d7895783d9 506 Gene3D G3DSA:3.60.110.10 207 481 4.2E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_07595 431312bbdd038f698af3d1d7895783d9 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.965 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BJD94_07595 431312bbdd038f698af3d1d7895783d9 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 1.8E-98 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 BJD94_07595 431312bbdd038f698af3d1d7895783d9 506 SUPERFAMILY SSF56317 215 486 4.45E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 SMART SM00422 3 71 6.9E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 Gene3D G3DSA:1.10.1660.10 2 126 9.1E-31 T 14-10-2018 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 3 142 6.3E-65 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 BJD94_17110 b8bccdb10dd0c78880dd2236ea9ea686 155 SUPERFAMILY SSF46955 4 125 5.86E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 SUPERFAMILY SSF69765 1 157 1.57E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.334 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.1E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 Gene3D G3DSA:3.30.1330.50 1 158 3.6E-70 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_13770 25f3885486bd9359c360a6b2aa148978 158 Pfam PF02542 YgbB family 2 155 5.5E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF47616 82 208 2.42E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 8.9E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF52833 11 110 8.42E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.8E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:3.40.30.10 11 202 5.7E-78 T 14-10-2018 BJD94_08970 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:1.20.1050.10 89 193 5.7E-78 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Gene3D G3DSA:2.40.30.170 223 341 5.8E-36 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Gene3D G3DSA:1.10.287.470 112 179 8.4E-8 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Gene3D G3DSA:1.10.287.470 87 111 5.8E-10 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Pfam PF13437 HlyD family secretion protein 209 327 1.1E-14 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 SUPERFAMILY SSF111369 119 173 8.63E-6 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 SUPERFAMILY SSF111369 52 122 1.02E-7 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 SUPERFAMILY SSF111369 186 265 3.27E-12 T 14-10-2018 BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Pfam PF13533 Biotin-lipoyl like 55 99 1.5E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_21060 fe021e80e6450cb40cecc6e6120b9bdf 341 Gene3D G3DSA:2.40.50.100 54 86 5.8E-10 T 14-10-2018 BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.2E-74 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 SUPERFAMILY SSF51735 421 547 1.05E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 Gene3D G3DSA:3.40.50.720 419 578 2.7E-33 T 14-10-2018 BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 Pfam PF02254 TrkA-N domain 422 535 2.9E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 Gene3D G3DSA:1.20.1530.20 2 399 2.4E-76 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BJD94_00380 bfd6d3ef615ea9321c1b78132a766cfd 649 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.9E-57 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 SUPERFAMILY SSF55186 551 709 2.35E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 4.2E-226 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 SUPERFAMILY SSF55681 3 254 2.49E-108 T 14-10-2018 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Gene3D G3DSA:3.30.54.20 623 676 2.0E-51 T 14-10-2018 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Gene3D G3DSA:3.10.310.40 749 857 1.2E-32 T 14-10-2018 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 199.596 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 SUPERFAMILY SSF101353 255 460 5.62E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Pfam PF02272 DHHA1 domain 722 856 8.5E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Gene3D G3DSA:2.40.30.130 454 551 6.9E-10 T 14-10-2018 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Gene3D G3DSA:3.30.930.10 2 251 4.0E-120 T 14-10-2018 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 SMART SM00863 652 695 1.1E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 SUPERFAMILY SSF50447 454 551 8.83E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_13820 e8c7521a97c2958064217d0eea58c7e2 860 Gene3D G3DSA:3.30.980.10 562 696 2.0E-51 T 14-10-2018 BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Gene3D G3DSA:3.90.10.10 244 319 7.4E-6 T 14-10-2018 BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 201 241 3.7E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 248 283 8.2E-12 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 87 143 9.4E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 157 191 2.0E-6 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 SUPERFAMILY SSF48695 58 307 2.13E-49 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 56 316 7.4E-97 T 14-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Gene3D G3DSA:1.10.1130.10 35 173 6.1E-7 T 14-10-2018 BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 248 283 1.0E-10 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 204 240 9.5E-8 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_20855 a85b343c4d5b751f60fe9fdf8b06ceba 323 Gene3D G3DSA:1.10.1130.10 174 243 1.8E-5 T 14-10-2018 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 SUPERFAMILY SSF46946 2 114 6.62E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.0E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:1.10.8.50 1 71 6.1E-28 T 14-10-2018 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 PIRSF PIRSF002134 1 118 3.3E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.2E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09770 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.048 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_14390 a2df08f09b4c229ababc1d90e3d2e37d 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BJD94_14390 a2df08f09b4c229ababc1d90e3d2e37d 337 Pfam PF01136 Peptidase family U32 75 336 1.2E-69 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 64.722 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 SUPERFAMILY SSF54373 292 474 1.67E-63 T 14-10-2018 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 2.9E-239 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 SUPERFAMILY SSF51905 1 534 6.85E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Gene3D G3DSA:3.30.410.40 151 471 7.5E-179 T 14-10-2018 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Gene3D G3DSA:1.10.1220.110 97 150 7.5E-179 T 14-10-2018 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 PIRSF PIRSF000137 1 536 1.0E-147 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Pfam PF00732 GMC oxidoreductase 5 297 8.1E-92 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Gene3D G3DSA:4.10.450.10 38 198 7.5E-179 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Pfam PF05199 GMC oxidoreductase 388 526 1.3E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BJD94_20285 f73c3f2f47772907581f1007cafb8ab9 560 Gene3D G3DSA:3.50.50.60 4 530 7.5E-179 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_03905 707180a01f33b5de35ebe28a3ef54b24 352 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.3E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD94_03905 707180a01f33b5de35ebe28a3ef54b24 352 SUPERFAMILY SSF81342 119 331 1.96E-45 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD94_03905 707180a01f33b5de35ebe28a3ef54b24 352 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.3E-82 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 BJD94_03905 707180a01f33b5de35ebe28a3ef54b24 352 Gene3D G3DSA:1.20.950.20 118 336 1.6E-64 T 14-10-2018 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.7E-98 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 SUPERFAMILY SSF51366 1 266 5.37E-92 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.032 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 Gene3D G3DSA:3.20.20.70 1 268 2.2E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_06015 ad689338b35b596eb9d5d5b7b79a2756 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.6E-104 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD94_11780 2d73d644a449830a1440a42f5d943039 613 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 613 33.475 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 BJD94_11780 2d73d644a449830a1440a42f5d943039 613 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site BJD94_11780 2d73d644a449830a1440a42f5d943039 613 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 4.2E-29 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_11780 2d73d644a449830a1440a42f5d943039 613 SUPERFAMILY SSF56935 29 613 4.28E-117 T 14-10-2018 BJD94_11780 2d73d644a449830a1440a42f5d943039 613 Gene3D G3DSA:2.40.170.20 156 613 1.2E-107 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_11780 2d73d644a449830a1440a42f5d943039 613 Gene3D G3DSA:2.170.130.10 28 153 6.4E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_11780 2d73d644a449830a1440a42f5d943039 613 Pfam PF00593 TonB dependent receptor 186 612 9.8E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_15210 f94af4d9525ee3f07ca6d9699f8c8e3c 195 SUPERFAMILY SSF46689 2 64 2.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15210 f94af4d9525ee3f07ca6d9699f8c8e3c 195 Gene3D G3DSA:1.10.357.10 72 191 1.7E-15 T 14-10-2018 BJD94_15210 f94af4d9525ee3f07ca6d9699f8c8e3c 195 SUPERFAMILY SSF48498 81 190 8.9E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_15210 f94af4d9525ee3f07ca6d9699f8c8e3c 195 Gene3D G3DSA:1.10.10.60 1 65 9.9E-20 T 14-10-2018 BJD94_15210 f94af4d9525ee3f07ca6d9699f8c8e3c 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 6.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Pfam PF13432 Tetratricopeptide repeat 91 148 3.2E-6 T 14-10-2018 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Pfam PF13432 Tetratricopeptide repeat 180 214 0.015 T 14-10-2018 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Pfam PF07719 Tetratricopeptide repeat 219 249 1.6E-7 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SUPERFAMILY SSF48452 55 325 9.48E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Gene3D G3DSA:1.25.40.10 167 340 5.7E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Pfam PF13181 Tetratricopeptide repeat 281 308 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 Gene3D G3DSA:1.25.40.10 45 156 8.1E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SMART SM00028 182 215 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SMART SM00028 216 249 7.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SMART SM00028 280 313 1.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SMART SM00028 87 120 6.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14585 e126105d3228ff9fcbaee172c845c528 346 SMART SM00028 121 154 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_19055 68871e831771a2817346a696961d71ce 683 SMART SM00642 62 446 9.7E-32 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19055 68871e831771a2817346a696961d71ce 683 SUPERFAMILY SSF51445 51 456 1.63E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_19055 68871e831771a2817346a696961d71ce 683 Pfam PF00128 Alpha amylase, catalytic domain 88 175 4.1E-27 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19055 68871e831771a2817346a696961d71ce 683 Pfam PF00128 Alpha amylase, catalytic domain 205 390 2.4E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19055 68871e831771a2817346a696961d71ce 683 Gene3D G3DSA:3.20.20.80 52 451 4.0E-69 T 14-10-2018 BJD94_19055 68871e831771a2817346a696961d71ce 683 Gene3D G3DSA:2.60.40.1180 452 533 6.9E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_19055 68871e831771a2817346a696961d71ce 683 SUPERFAMILY SSF51011 459 534 2.56E-7 T 14-10-2018 BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 Gene3D G3DSA:3.40.50.410 82 285 9.8E-36 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 Pfam PF13519 von Willebrand factor type A domain 88 194 2.5E-16 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 SUPERFAMILY SSF48452 350 444 2.35E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 Gene3D G3DSA:1.25.40.10 336 458 5.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 SUPERFAMILY SSF53300 86 266 8.22E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 SMART SM00028 397 430 2.1E-9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 SMART SM00327 84 285 3.4E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 SUPERFAMILY SSF81995 445 501 2.48E-5 T 14-10-2018 BJD94_19685 c8f4a6475c50b4f13659f8a2238828c9 614 Pfam PF00515 Tetratricopeptide repeat 397 429 8.6E-11 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 PIRSF PIRSF001237 1 342 1.1E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 Pfam PF01979 Amidohydrolase family 11 317 3.4E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 47.217 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 SUPERFAMILY SSF51556 1 342 6.81E-147 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.1E-139 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 Gene3D G3DSA:3.20.20.140 2 342 1.1E-110 T 14-10-2018 BJD94_19850 854a811f36b81602dd93458c8a156bd9 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 Gene3D G3DSA:3.40.50.2300 74 318 4.7E-77 T 14-10-2018 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 14-10-2018 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 SMART SM00354 12 82 1.0E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 Gene3D G3DSA:3.40.50.2300 168 301 4.7E-77 T 14-10-2018 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 Pfam PF13377 Periplasmic binding protein-like domain 180 339 2.4E-26 T 14-10-2018 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 SUPERFAMILY SSF47413 12 70 1.13E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 Gene3D G3DSA:1.10.260.40 5 70 1.2E-21 T 14-10-2018 BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 SUPERFAMILY SSF53822 70 327 8.14E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_16745 23c7c6886fc9815dcc2ee925304cd739 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.6E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_11120 e76556ba2a6111286a68821446208ba5 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.911 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD94_11120 e76556ba2a6111286a68821446208ba5 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.0E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD94_11120 e76556ba2a6111286a68821446208ba5 211 SUPERFAMILY SSF53335 7 209 6.08E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_11120 e76556ba2a6111286a68821446208ba5 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 3.8E-64 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD94_11120 e76556ba2a6111286a68821446208ba5 211 PIRSF PIRSF003078 1 211 2.1E-59 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD94_11120 e76556ba2a6111286a68821446208ba5 211 Gene3D G3DSA:3.40.50.150 4 210 5.6E-69 T 14-10-2018 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 3.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 Gene3D G3DSA:3.40.190.10 114 275 7.8E-38 T 14-10-2018 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 Gene3D G3DSA:3.40.190.10 180 270 7.8E-38 T 14-10-2018 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 SUPERFAMILY SSF46785 19 103 1.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 SUPERFAMILY SSF53850 109 298 1.81E-19 T 14-10-2018 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 Pfam PF03466 LysR substrate binding domain 109 295 9.3E-20 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 Gene3D G3DSA:1.10.10.10 21 111 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16805 d14dc730b370fa8d7cd6921ed8fea596 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 PIRSF PIRSF004505 1 155 2.2E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 SUPERFAMILY SSF75217 1 154 2.09E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.0E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 Gene3D G3DSA:3.40.1280.10 1 156 8.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.2E-78 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD94_07625 0ec8173a953cb3ea82e5380600f372c5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.66 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 Gene3D G3DSA:1.20.1560.10 142 454 1.0E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 4.7E-291 T 14-10-2018 IPR017750 ATPase, type I secretion system BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 Pfam PF00005 ABC transporter 487 635 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 Gene3D G3DSA:3.90.70.10 1 126 1.3E-37 T 14-10-2018 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 SUPERFAMILY SSF90123 142 452 2.09E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.0E-21 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 SMART SM00382 495 681 5.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 Gene3D G3DSA:3.40.50.300 460 703 1.4E-74 T 14-10-2018 BJD94_17785 d9cc7798aa7dc92269f6c3e40b4c6218 704 SUPERFAMILY SSF52540 459 693 1.04E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00460 db063c92327f87cfec298fba90e15910 80 Gene3D G3DSA:3.30.110.40 1 73 3.0E-9 T 14-10-2018 IPR036868 TusA-like domain superfamily BJD94_00460 db063c92327f87cfec298fba90e15910 80 Pfam PF01206 Sulfurtransferase TusA 4 70 2.5E-12 T 14-10-2018 IPR001455 TusA-like domain BJD94_00460 db063c92327f87cfec298fba90e15910 80 SUPERFAMILY SSF64307 4 74 8.24E-14 T 14-10-2018 IPR036868 TusA-like domain superfamily BJD94_17885 3a4cec62f3608d8c957108f68e1938b5 278 Pfam PF11185 Protein of unknown function (DUF2971) 113 181 2.8E-8 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 Pfam PF02096 60Kd inner membrane protein 350 529 6.3E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 3.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 3.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 3.9E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 2.3E-72 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 Gene3D G3DSA:2.70.98.90 60 329 3.3E-88 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.717 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 1.2E-110 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal BJD94_11140 e1e33c2c4286793a55a0af775f5ae117 539 Pfam PF14849 YidC periplasmic domain 65 339 5.0E-83 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain BJD94_00530 6a31ad81b4c89337ba46fc4f5a5556b6 300 SUPERFAMILY SSF54909 1 296 3.4E-93 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_00530 6a31ad81b4c89337ba46fc4f5a5556b6 300 Pfam PF04261 Dyp-type peroxidase family 5 293 3.5E-89 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BJD94_00530 6a31ad81b4c89337ba46fc4f5a5556b6 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.6E-85 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SUPERFAMILY SSF49299 591 681 5.76E-8 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Pfam PF02010 REJ domain 247 354 4.8E-5 T 14-10-2018 IPR002859 PKD/REJ-like domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SUPERFAMILY SSF49299 122 204 5.89E-6 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SUPERFAMILY SSF49299 403 493 5.1E-10 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 595 685 0.0077 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 313 402 5.3 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 407 495 0.0064 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 34 120 0.48 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 218 308 0.092 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 690 778 1.4 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 500 588 0.1 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SMART SM00089 129 211 5.7 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.130.10.10 1245 1496 7.6E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 592 687 5.8E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 123 215 8.9E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 405 497 6.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 498 591 2.7E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 688 782 7.1E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 30 122 4.2E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 311 400 1.0E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 Gene3D G3DSA:2.60.40.10 225 305 1.3E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19020 4c8d3ee22cce81da8e695cfbbd53e777 1528 SUPERFAMILY SSF49299 214 305 3.27E-8 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00448 4 114 1.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:3.40.50.2300 1 123 4.0E-33 T 14-10-2018 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:1.10.10.10 124 235 4.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF46894 137 233 1.81E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 4.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00862 156 232 1.4E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00072 Response regulator receiver domain 6 113 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08750 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF52172 2 123 1.29E-35 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 SUPERFAMILY SSF46894 145 211 4.42E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 Gene3D G3DSA:3.40.50.2300 11 143 6.4E-21 T 14-10-2018 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 Gene3D G3DSA:1.10.10.10 145 214 3.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 SMART SM00421 152 209 8.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_13040 31ed4b37870646dcc9f083592ec3db9c 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 4.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_13760 07c5ffac5ea1eae1eba405c9ed553d10 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.024 T 14-10-2018 IPR023081 Cell division protein FtsB BJD94_13760 07c5ffac5ea1eae1eba405c9ed553d10 93 Pfam PF04977 Septum formation initiator 11 89 6.1E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BJD94_13760 07c5ffac5ea1eae1eba405c9ed553d10 93 Gene3D G3DSA:1.20.5.400 22 63 3.3E-10 T 14-10-2018 BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Pfam PF12245 Bacterial Ig-like domain (group 3) 507 522 3.1 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Pfam PF12245 Bacterial Ig-like domain (group 3) 2122 2138 1.6 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Pfam PF12245 Bacterial Ig-like domain (group 3) 837 862 0.97 T 14-10-2018 IPR022038 Bacterial Ig-like domain BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 1407 1507 1.3E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 430 528 6.7E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 329 429 5.2E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 231 327 1.5E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 868 968 4.5E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 1508 1608 2.4E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 1946 2047 2.5E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 770 865 1.8E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 969 1070 2.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 2050 2147 5.5E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 Gene3D G3DSA:2.60.40.10 1313 1404 1.4E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2872 2999 6.9E-25 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain BJD94_19450 f9c22341a9d34288528ca6281915c54d 4655 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4563 4653 8.8E-13 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass BJD94_15610 85da8b72f6225686c59121ba3b2587e1 152 PIRSF PIRSF006019 1 147 3.7E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD94_15610 85da8b72f6225686c59121ba3b2587e1 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD94_15610 85da8b72f6225686c59121ba3b2587e1 152 Gene3D G3DSA:3.40.140.10 2 146 2.4E-40 T 14-10-2018 BJD94_15610 85da8b72f6225686c59121ba3b2587e1 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 2.5E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD94_15610 85da8b72f6225686c59121ba3b2587e1 152 SUPERFAMILY SSF53927 8 146 1.04E-31 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 168 2.9E-60 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 SMART SM00387 350 460 9.4E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 SUPERFAMILY SSF47384 230 305 1.96E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 SUPERFAMILY SSF55874 296 458 1.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 SMART SM00388 244 306 6.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Gene3D G3DSA:1.10.287.130 194 307 1.0E-33 T 14-10-2018 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 SMART SM00304 190 243 9.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 3.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Pfam PF00672 HAMP domain 191 238 1.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Gene3D G3DSA:3.30.565.10 310 460 2.8E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Gene3D G3DSA:3.30.450.210 31 157 1.9E-50 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily BJD94_12155 a2e1e1d81e19284741933f0b63d3194e 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 458 6.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 SUPERFAMILY SSF52172 89 159 3.27E-22 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 Pfam PF00072 Response regulator receiver domain 93 161 4.0E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 SMART SM00448 91 170 0.0048 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 Gene3D G3DSA:3.40.50.2300 1 74 2.7E-7 T 14-10-2018 BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 SUPERFAMILY SSF52172 1 65 5.41E-6 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_14880 5761c767243b42e5cf4a0f33c4d7ad32 170 Gene3D G3DSA:3.40.50.2300 75 165 2.6E-23 T 14-10-2018 BJD94_17960 e154c51b9605f21ac4901ce833545d3e 324 Pfam PF02195 ParB-like nuclease domain 77 145 7.1E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin BJD94_17960 e154c51b9605f21ac4901ce833545d3e 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 231 7.5E-23 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BJD94_17960 e154c51b9605f21ac4901ce833545d3e 324 SUPERFAMILY SSF110849 75 150 1.83E-8 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD94_17960 e154c51b9605f21ac4901ce833545d3e 324 SMART SM00470 53 149 4.2E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin BJD94_17960 e154c51b9605f21ac4901ce833545d3e 324 Gene3D G3DSA:1.10.10.2830 153 271 2.2E-16 T 14-10-2018 BJD94_05005 a83fb043755913ee3fc118b1aafeaa98 817 Pfam PF02687 FtsX-like permease family 715 809 3.9E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_05005 a83fb043755913ee3fc118b1aafeaa98 817 Pfam PF02687 FtsX-like permease family 271 368 9.6E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 381 3.2E-94 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 Gene3D G3DSA:1.10.441.10 151 308 4.2E-129 T 14-10-2018 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 3.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 263 288 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 Pfam PF01238 Phosphomannose isomerase type I 5 363 2.6E-88 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 SUPERFAMILY SSF51182 3 384 2.31E-100 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 Gene3D G3DSA:2.60.120.10 309 390 4.2E-129 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 Gene3D G3DSA:2.60.120.10 10 283 4.2E-129 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18730 0bca7eb4a1db2515b63ab2760015d5b4 397 PIRSF PIRSF001480 2 397 1.5E-102 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_01015 807fb65b1aae3f04db6e18ed72479568 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 7.3E-32 T 14-10-2018 IPR022548 Domain of unknown function DUF2846 BJD94_01015 807fb65b1aae3f04db6e18ed72479568 154 PIRSF PIRSF012335 1 154 4.9E-72 T 14-10-2018 IPR016596 Protein of unknown function UCP012335 BJD94_16175 1d79d9c3d93f8cff29514905c4cbe35b 366 Gene3D G3DSA:3.40.50.2300 33 363 3.5E-144 T 14-10-2018 BJD94_16175 1d79d9c3d93f8cff29514905c4cbe35b 366 Pfam PF13407 Periplasmic binding protein domain 69 322 1.1E-13 T 14-10-2018 IPR025997 Periplasmic binding protein BJD94_16175 1d79d9c3d93f8cff29514905c4cbe35b 366 Gene3D G3DSA:3.40.50.2300 180 359 3.5E-144 T 14-10-2018 BJD94_16175 1d79d9c3d93f8cff29514905c4cbe35b 366 SUPERFAMILY SSF53822 27 364 5.07E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 Gene3D G3DSA:1.10.287.950 213 544 5.2E-73 T 14-10-2018 BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 Pfam PF00672 HAMP domain 215 263 5.8E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 SMART SM00304 213 267 3.2E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 507 5.5E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 SUPERFAMILY SSF58104 235 544 4.45E-75 T 14-10-2018 BJD94_06690 ff08eb3e386472f6fdeb2ece99f81ae0 544 SMART SM00283 282 543 3.4E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.562 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 SUPERFAMILY SSF51395 1 336 1.23E-105 T 14-10-2018 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 PIRSF PIRSF000164 10 336 4.3E-107 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.3E-88 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.7E-145 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BJD94_04110 714a6a06178d9f2b17172d9d10ddf668 336 Gene3D G3DSA:3.20.20.70 2 336 2.6E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 5 564 57.428 T 14-10-2018 IPR023017 Transport protein YbjL, putative BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Gene3D G3DSA:3.30.70.1450 308 380 2.5E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Pfam PF02080 TrkA-C domain 314 378 1.2E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Pfam PF02080 TrkA-C domain 236 285 5.7E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 25 175 1.3E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 397 548 4.0E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Gene3D G3DSA:3.30.70.1450 232 292 2.2E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 SUPERFAMILY SSF116726 298 381 1.57E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Pfam PF06826 Predicted Permease Membrane Region 21 189 3.0E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 Pfam PF06826 Predicted Permease Membrane Region 393 561 1.1E-41 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_04975 234267abfd9ee7678a66f1dde97b56d7 564 SUPERFAMILY SSF116726 234 289 5.75E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 SUPERFAMILY SSF51998 121 687 8.24E-194 T 14-10-2018 BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 Pfam PF03477 ATP cone domain 4 89 1.8E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.4E-200 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 Gene3D G3DSA:3.20.70.20 121 687 2.7E-233 T 14-10-2018 BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BJD94_21660 58b8b31e4d688ae53a4ae1c5bc1f616b 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.4E-182 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 BJD94_10935 75faa5db4c754681f1e271bd443b324d 367 Gene3D G3DSA:1.10.10.10 295 362 5.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_10935 75faa5db4c754681f1e271bd443b324d 367 Pfam PF02481 DNA recombination-mediator protein A 75 278 8.2E-75 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BJD94_10935 75faa5db4c754681f1e271bd443b324d 367 Gene3D G3DSA:3.40.50.450 1 291 7.5E-94 T 14-10-2018 BJD94_10935 75faa5db4c754681f1e271bd443b324d 367 SUPERFAMILY SSF102405 81 286 6.26E-40 T 14-10-2018 BJD94_10935 75faa5db4c754681f1e271bd443b324d 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 286 1.2E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BJD94_07135 d30b5e63466b9387ab959d99e70fe8c6 92 Pfam PF10262 Rdx family 5 78 2.2E-33 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type BJD94_07135 d30b5e63466b9387ab959d99e70fe8c6 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 7.3E-24 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type BJD94_07135 d30b5e63466b9387ab959d99e70fe8c6 92 SUPERFAMILY SSF52833 4 87 3.35E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_07135 d30b5e63466b9387ab959d99e70fe8c6 92 Gene3D G3DSA:3.40.30.10 2 92 6.8E-42 T 14-10-2018 BJD94_05405 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 31 417 1.34E-43 T 14-10-2018 IPR029056 Ribokinase-like BJD94_05405 22512e40c126a1021deed6740c35753a 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 7.5E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_18370 181a878a043ddc73110898d0c02c8343 212 Gene3D G3DSA:3.40.630.20 1 212 7.6E-79 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PIRSF PIRSF015592 1 210 8.9E-82 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 3.5E-42 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.5E-42 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.5E-42 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.5E-42 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 3.5E-42 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 Pfam PF01470 Pyroglutamyl peptidase 3 199 1.0E-72 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 1.0E-76 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.377 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BJD94_18370 181a878a043ddc73110898d0c02c8343 212 SUPERFAMILY SSF53182 1 205 2.22E-71 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.229 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.5E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.5E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.5E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 SUPERFAMILY SSF47729 1 91 5.45E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.0E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 SMART SM00411 1 91 1.9E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.1E-48 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 Gene3D G3DSA:4.10.520.10 2 39 1.2E-11 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_05600 3f3c3d9b516369456e312d672910ed81 93 Gene3D G3DSA:4.10.520.10 40 92 7.7E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_05760 c48f3d6aa7b4d111fa8da7070f4e8bcb 519 SUPERFAMILY SSF52091 416 498 2.75E-11 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_05760 c48f3d6aa7b4d111fa8da7070f4e8bcb 519 Pfam PF00916 Sulfate permease family 13 374 3.9E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD94_05760 c48f3d6aa7b4d111fa8da7070f4e8bcb 519 Pfam PF01740 STAS domain 416 503 3.3E-6 T 14-10-2018 IPR002645 STAS domain BJD94_05760 c48f3d6aa7b4d111fa8da7070f4e8bcb 519 Gene3D G3DSA:3.30.750.24 409 499 1.5E-26 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_14405 4d8da69b9e26578aee913c4783336fee 167 Pfam PF13527 Acetyltransferase (GNAT) domain 4 123 3.7E-10 T 14-10-2018 BJD94_14405 4d8da69b9e26578aee913c4783336fee 167 SUPERFAMILY SSF55729 1 130 3.72E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_14405 4d8da69b9e26578aee913c4783336fee 167 Gene3D G3DSA:3.40.630.30 1 167 3.4E-46 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.344 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 SUPERFAMILY SSF54211 3 191 1.14E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 181 198 2.1E-31 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 103 118 2.1E-31 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 10 25 2.1E-31 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 143 156 2.1E-31 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 260 275 2.1E-31 T 14-10-2018 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 Gene3D G3DSA:3.30.230.10 5 173 6.0E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 SUPERFAMILY SSF55060 178 294 1.15E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.2E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 313 9.7E-109 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 Gene3D G3DSA:3.30.70.890 174 283 6.0E-90 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 5.5E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BJD94_08725 1ad918fa7f01bb1a7be23088ef9a7720 318 PIRSF PIRSF000676 1 316 6.1E-79 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BJD94_02335 0553fc8e3dad7df8f72edf5ef02eb3f9 462 Pfam PF00263 Bacterial type II and III secretion system protein 256 415 8.9E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD94_02335 0553fc8e3dad7df8f72edf5ef02eb3f9 462 Pfam PF13629 Pilus formation protein N terminal region 23 92 1.2E-17 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal BJD94_02335 0553fc8e3dad7df8f72edf5ef02eb3f9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 417 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_02335 0553fc8e3dad7df8f72edf5ef02eb3f9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_02335 0553fc8e3dad7df8f72edf5ef02eb3f9 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 380 398 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 Gene3D G3DSA:3.40.50.880 1 287 1.4E-121 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 17 285 41.803 T 14-10-2018 IPR033752 MetA family BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 SUPERFAMILY SSF52317 4 283 1.69E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 22 275 5.0E-139 T 14-10-2018 BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 Pfam PF04204 Homoserine O-succinyltransferase 1 285 1.7E-131 T 14-10-2018 IPR033752 MetA family BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 287 3.2E-155 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 BJD94_04715 9edbbb2fe9c7ad132484e0c4c945f387 299 PIRSF PIRSF000450 1 295 1.5E-141 T 14-10-2018 IPR033752 MetA family BJD94_10855 6aa8a799365e602203a2909fe564db27 461 SUPERFAMILY SSF49503 312 460 2.75E-33 T 14-10-2018 IPR008972 Cupredoxin BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Pfam PF07731 Multicopper oxidase 359 460 4.7E-25 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BJD94_10855 6aa8a799365e602203a2909fe564db27 461 SUPERFAMILY SSF49503 160 281 6.52E-17 T 14-10-2018 IPR008972 Cupredoxin BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Pfam PF00394 Multicopper oxidase 172 284 1.7E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Gene3D G3DSA:2.60.40.420 161 308 1.1E-22 T 14-10-2018 IPR008972 Cupredoxin BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Pfam PF07732 Multicopper oxidase 46 157 2.7E-39 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BJD94_10855 6aa8a799365e602203a2909fe564db27 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Gene3D G3DSA:2.60.40.420 15 154 1.0E-44 T 14-10-2018 IPR008972 Cupredoxin BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 5.4E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD94_10855 6aa8a799365e602203a2909fe564db27 461 Gene3D G3DSA:2.60.40.420 309 461 2.5E-36 T 14-10-2018 IPR008972 Cupredoxin BJD94_10855 6aa8a799365e602203a2909fe564db27 461 SUPERFAMILY SSF49503 31 156 1.6E-39 T 14-10-2018 IPR008972 Cupredoxin BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Gene3D G3DSA:2.160.20.60 1239 1510 5.0E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Pfam PF01493 GXGXG motif 1267 1452 3.9E-84 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Pfam PF00310 Glutamine amidotransferases class-II 21 443 7.0E-186 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Pfam PF04898 Glutamate synthase central domain 472 756 4.3E-116 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 SUPERFAMILY SSF51395 461 1220 1.83E-270 T 14-10-2018 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1187 9.9E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 SUPERFAMILY SSF69336 1235 1498 2.49E-95 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD94_08775 88eb34e1654e76aa2e48d494fdb096f1 1512 SUPERFAMILY SSF56235 21 446 1.61E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 SUPERFAMILY SSF50104 2 115 4.51E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.566 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 Gene3D G3DSA:2.30.30.790 2 117 1.0E-16 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 PIRSF PIRSF002191 1 117 8.7E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13950 ffe83418104faa07c1a3fa28d4508a6d 117 Pfam PF01245 Ribosomal protein L19 3 113 8.6E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.6E-99 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Gene3D G3DSA:1.10.8.60 490 583 3.4E-32 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Gene3D G3DSA:2.30.130.40 1 116 1.5E-35 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 SUPERFAMILY SSF52540 312 586 1.27E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Gene3D G3DSA:3.30.230.10 584 771 5.2E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Gene3D G3DSA:3.40.50.300 312 489 9.7E-61 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 5.7E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 SMART SM00464 10 201 6.4E-75 T 14-10-2018 IPR003111 Lon, substrate-binding domain BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 SMART SM00382 347 491 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 6.0E-56 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 6.0E-56 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 6.0E-56 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 6.0E-56 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 6.0E-56 T 14-10-2018 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.135 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 SUPERFAMILY SSF54211 594 769 1.82E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 SUPERFAMILY SSF88697 10 200 1.91E-48 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_06605 36b54f2ded41e314213fd3d9adb52bb5 783 Gene3D G3DSA:1.20.58.1480 119 244 4.9E-45 T 14-10-2018 BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 SUPERFAMILY SSF50331 238 368 2.21E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 SUPERFAMILY SSF52540 4 245 5.32E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 Gene3D G3DSA:3.40.50.300 3 223 4.6E-71 T 14-10-2018 BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 SMART SM00382 30 214 1.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 Gene3D G3DSA:2.40.50.140 293 352 7.4E-31 T 14-10-2018 BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 Gene3D G3DSA:2.40.50.940 224 361 7.4E-31 T 14-10-2018 BJD94_06655 2ab38400183450fd6afd2b0555a2b5aa 371 Pfam PF00005 ABC transporter 21 163 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 SUPERFAMILY SSF46894 155 222 4.42E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 SMART SM00421 160 217 5.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 4.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 Gene3D G3DSA:3.30.450.20 14 132 3.6E-10 T 14-10-2018 BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 Gene3D G3DSA:1.10.10.10 154 222 5.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 SUPERFAMILY SSF55785 16 127 1.56E-8 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_17750 b27b8f3e5f494bb0a51a61c7a906f956 246 Pfam PF08448 PAS fold 17 128 1.1E-23 T 14-10-2018 IPR013656 PAS fold-4 BJD94_18610 485d00af35f3ff85e0ee276328dbc8c9 565 Gene3D G3DSA:3.40.50.300 138 357 8.3E-18 T 14-10-2018 BJD94_18610 485d00af35f3ff85e0ee276328dbc8c9 565 Gene3D G3DSA:3.40.50.300 358 559 1.5E-38 T 14-10-2018 BJD94_18610 485d00af35f3ff85e0ee276328dbc8c9 565 SUPERFAMILY SSF52540 160 555 1.6E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18610 485d00af35f3ff85e0ee276328dbc8c9 565 Pfam PF01935 Domain of unknown function DUF87 151 318 1.4E-26 T 14-10-2018 IPR002789 Helicase HerA, central domain BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:1.10.150.390 1317 1378 1.2E-28 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 646 5.1E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 397 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 487 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:1.10.40.90 376 418 3.1E-22 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:2.40.50.100 950 1023 5.0E-24 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 12 1378 18.98 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1368 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF04998 RNA polymerase Rpb1, domain 5 768 1316 3.5E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:2.40.50.100 1024 1128 1.2E-29 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 SMART SM00663 237 516 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 SUPERFAMILY SSF64484 18 1364 0.0 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:2.40.50.100 1153 1216 5.2E-64 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF05000 RNA polymerase Rpb1, domain 4 676 765 5.0E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:1.10.132.30 643 792 3.4E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:1.10.1790.20 1137 1315 5.2E-64 T 14-10-2018 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 344 6.0E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_11960 0142a7f78eb456a147478016a243b909 1402 Gene3D G3DSA:1.10.274.100 492 642 3.9E-39 T 14-10-2018 BJD94_06700 890207f9c8d1aec64ed4dcae7adb7198 418 SUPERFAMILY SSF51905 4 380 1.3E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06700 890207f9c8d1aec64ed4dcae7adb7198 418 Gene3D G3DSA:3.50.50.60 2 417 8.1E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06700 890207f9c8d1aec64ed4dcae7adb7198 418 Pfam PF01494 FAD binding domain 6 164 2.2E-17 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD94_06700 890207f9c8d1aec64ed4dcae7adb7198 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.4E-5 T 14-10-2018 BJD94_06700 890207f9c8d1aec64ed4dcae7adb7198 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.4E-5 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82866 294 498 1.01E-42 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82866 799 1037 3.01E-52 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82693 46 127 9.16E-20 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.8E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82714 185 269 7.72E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82714 716 800 2.35E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.2090.10 182 274 1.9E-274 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.2090.10 716 804 1.9E-274 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.70.1320 135 328 1.9E-274 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 1.1E-246 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.70.1430 562 664 1.9E-274 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:1.20.1640.10 15 508 1.9E-274 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:1.20.1640.10 509 1030 1.9E-274 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.70.1430 42 812 1.9E-274 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 SUPERFAMILY SSF82693 138 328 1.86E-23 T 14-10-2018 BJD94_16710 ddb9027ea8827c585c923ac3dd5eb716 1042 Gene3D G3DSA:3.30.70.1440 665 862 1.9E-274 T 14-10-2018 BJD94_11020 6d42fea9643003966f3309a3df30b8a9 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 9.0E-4 T 14-10-2018 BJD94_11020 6d42fea9643003966f3309a3df30b8a9 94 SUPERFAMILY SSF55021 3 76 1.33E-10 T 14-10-2018 BJD94_11020 6d42fea9643003966f3309a3df30b8a9 94 Pfam PF13710 ACT domain 12 73 7.4E-21 T 14-10-2018 BJD94_11020 6d42fea9643003966f3309a3df30b8a9 94 Gene3D G3DSA:3.30.70.260 1 90 2.5E-11 T 14-10-2018 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 228 1.4E-46 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 251 9.7E-97 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 Gene3D G3DSA:1.10.800.10 1 263 1.3E-98 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 BJD94_15245 f23aff25309da8acc6ebb2a2f0591212 263 SUPERFAMILY SSF56534 3 247 1.83E-96 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BJD94_19910 99eb7a31d28a7745aba6530b6f95167f 343 Pfam PF01032 FecCD transport family 19 336 3.5E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_19910 99eb7a31d28a7745aba6530b6f95167f 343 SUPERFAMILY SSF81345 6 337 8.37E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_19910 99eb7a31d28a7745aba6530b6f95167f 343 Gene3D G3DSA:1.10.3470.10 5 342 9.5E-101 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_21485 19ca6eb8ba1364432d4846923a55ee97 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 6 292 3.8E-77 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BJD94_21485 19ca6eb8ba1364432d4846923a55ee97 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 29 291 1.3E-79 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BJD94_21485 19ca6eb8ba1364432d4846923a55ee97 311 SUPERFAMILY SSF50891 189 295 1.52E-8 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_21485 19ca6eb8ba1364432d4846923a55ee97 311 SMART SM00797 27 308 9.6E-129 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BJD94_21485 19ca6eb8ba1364432d4846923a55ee97 311 Gene3D G3DSA:2.40.100.10 182 309 8.7E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:3.30.65.10 749 811 2.6E-30 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:3.30.65.10 701 748 2.7E-6 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SUPERFAMILY SSF56712 3 614 7.85E-198 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.2E-246 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:2.70.20.10 219 478 1.1E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 1.0E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 9.8E-19 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 8.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SUPERFAMILY SSF57783 813 869 2.55E-21 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF01751 Toprim domain 5 148 5.0E-32 T 14-10-2018 IPR006171 TOPRIM domain BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SUPERFAMILY SSF57783 748 811 2.72E-18 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SMART SM00436 139 227 1.3E-47 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SMART SM00437 278 532 4.6E-119 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Pfam PF01131 DNA topoisomerase 163 569 5.3E-128 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:1.10.290.10 286 410 1.1E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:3.40.50.140 1 169 5.4E-66 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:1.10.460.10 171 576 1.1E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SMART SM00493 3 138 9.0E-37 T 14-10-2018 IPR006171 TOPRIM domain BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 53.931 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 Gene3D G3DSA:2.20.25.10 812 869 1.5E-27 T 14-10-2018 BJD94_01345 d4cc915d3645eb6567d6b7ec8bf07ef8 874 SUPERFAMILY SSF57783 704 746 2.21E-5 T 14-10-2018 BJD94_16870 4fa1af7ad359536ecd668a1e87015fb9 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 8.4E-142 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 BJD94_16870 4fa1af7ad359536ecd668a1e87015fb9 354 PIRSF PIRSF005508 3 354 6.7E-139 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 BJD94_16870 4fa1af7ad359536ecd668a1e87015fb9 354 Gene3D G3DSA:1.20.1530.20 9 345 3.2E-26 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BJD94_16870 4fa1af7ad359536ecd668a1e87015fb9 354 Pfam PF01758 Sodium Bile acid symporter family 61 257 1.9E-61 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 9.6E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 SUPERFAMILY SSF55781 74 256 1.83E-50 T 14-10-2018 BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 Gene3D G3DSA:1.10.10.10 4 77 3.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 SUPERFAMILY SSF46785 10 81 5.55E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 Gene3D G3DSA:3.30.450.40 83 260 9.3E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.0E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD94_17020 94911a53eb4d6257d97908e1fb175c46 260 SMART SM00346 10 99 1.6E-28 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD94_17935 2edbd75ab7aa0cb8536378ed6e389a7c 168 Pfam PF01584 CheW-like domain 24 160 1.2E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_17935 2edbd75ab7aa0cb8536378ed6e389a7c 168 Gene3D G3DSA:2.40.50.180 43 154 4.1E-32 T 14-10-2018 BJD94_17935 2edbd75ab7aa0cb8536378ed6e389a7c 168 SMART SM00260 20 159 2.2E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_17935 2edbd75ab7aa0cb8536378ed6e389a7c 168 Gene3D G3DSA:2.30.30.40 27 153 4.1E-32 T 14-10-2018 BJD94_17935 2edbd75ab7aa0cb8536378ed6e389a7c 168 SUPERFAMILY SSF50341 18 161 3.53E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 2.7E-118 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 5.1E-109 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.786 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 PIRSF PIRSF001365 1 291 4.3E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 SMART SM01130 1 290 3.6E-142 T 14-10-2018 IPR002220 DapA-like GO:0016829 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 Gene3D G3DSA:3.20.20.70 1 292 5.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_00480 6b334b15f9c35a604d585e8633b659f8 292 SUPERFAMILY SSF51569 2 290 5.65E-101 T 14-10-2018 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 Gene3D G3DSA:3.30.565.10 382 528 2.0E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 Gene3D G3DSA:1.10.287.130 256 371 1.9E-22 T 14-10-2018 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 SMART SM00387 417 527 4.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 SMART SM00388 305 371 8.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 SUPERFAMILY SSF55874 363 529 3.54E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 SMART SM00304 252 304 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 SUPERFAMILY SSF47384 288 369 5.49E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 367 6.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_00935 ea2a6b1ab812a6c52fc38c66809dcf91 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 524 4.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 Gene3D G3DSA:3.30.470.10 10 127 1.2E-106 T 14-10-2018 BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.8E-143 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 Pfam PF01063 Amino-transferase class IV 36 268 6.7E-47 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 Gene3D G3DSA:3.20.10.10 138 289 1.2E-106 T 14-10-2018 BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 SUPERFAMILY SSF56752 7 307 1.1E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BJD94_11025 45814cf2139da4f2978c951a5d79738d 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 Gene3D G3DSA:1.10.1740.10 12 95 1.0E-18 T 14-10-2018 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 Pfam PF04542 Sigma-70 region 2 33 99 1.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 SUPERFAMILY SSF88946 27 109 2.62E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 1.9E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 SUPERFAMILY SSF88659 120 180 3.18E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 Pfam PF08281 Sigma-70, region 4 123 175 5.8E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 Gene3D G3DSA:1.10.10.10 117 181 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_00785 66976cf8c1051901d32991dd583ebc6c 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_08505 648e0682018c5d9f436377c0173a231d 387 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 22 386 42.597 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BJD94_08505 648e0682018c5d9f436377c0173a231d 387 Gene3D G3DSA:3.30.420.40 163 346 7.0E-137 T 14-10-2018 BJD94_08505 648e0682018c5d9f436377c0173a231d 387 Gene3D G3DSA:3.30.420.40 29 381 7.0E-137 T 14-10-2018 BJD94_08505 648e0682018c5d9f436377c0173a231d 387 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 23 386 1.4E-168 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BJD94_08505 648e0682018c5d9f436377c0173a231d 387 SUPERFAMILY SSF53067 23 361 1.07E-27 T 14-10-2018 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 451 550 2.95E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF50249 608 695 9.42E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 234 550 1.3E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 14-10-2018 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54791 555 623 1.14E-15 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.4E-17 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 7.9E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 146 236 3.23E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00322 553 618 1.7E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.16 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 5 145 1.27E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.7E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.7E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 2 229 1.4E-77 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00316 621 691 1.8E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00013 KH domain 557 615 1.0E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.1370.10 551 622 1.1E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 PIRSF PIRSF005499 2 708 1.2E-295 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD94_14365 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 293 489 2.53E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_13875 d7976cbdc4192f113bf64efcff5f9072 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.6E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 BJD94_13875 d7976cbdc4192f113bf64efcff5f9072 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 36.017 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 BJD94_13875 d7976cbdc4192f113bf64efcff5f9072 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.1E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 BJD94_16750 a5c67049f2e95b138fa826057fcb393a 147 SUPERFAMILY SSF55804 1 146 8.24E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_16750 a5c67049f2e95b138fa826057fcb393a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 6.3E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_16750 a5c67049f2e95b138fa826057fcb393a 147 Gene3D G3DSA:3.40.930.10 1 147 2.2E-56 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_16750 a5c67049f2e95b138fa826057fcb393a 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 Gene3D G3DSA:1.10.10.60 163 272 7.4E-25 T 14-10-2018 BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 Pfam PF12833 Helix-turn-helix domain 190 266 2.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 SUPERFAMILY SSF51215 31 150 2.09E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 SUPERFAMILY SSF46689 220 265 4.35E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 Pfam PF12852 Cupin 2 153 4.7E-21 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 SMART SM00342 184 266 3.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_01720 ebb5e99de3da99bb54dd4cc2d7145ac0 279 SUPERFAMILY SSF46689 167 218 1.75E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 Gene3D G3DSA:3.30.870.10 12 441 1.1E-166 T 14-10-2018 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 Pfam PF13091 PLD-like domain 252 402 1.2E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 Pfam PF13091 PLD-like domain 34 146 2.4E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 SUPERFAMILY SSF56024 8 179 2.51E-27 T 14-10-2018 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 SUPERFAMILY SSF56024 247 392 9.68E-26 T 14-10-2018 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 SMART SM00155 126 152 5.3E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 SMART SM00155 347 374 0.0047 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 PIRSF PIRSF000850 2 446 8.6E-213 T 14-10-2018 BJD94_11870 35f1e3182d2f7cf0676f89fe7acf6e47 446 Gene3D G3DSA:3.30.870.10 18 225 1.1E-166 T 14-10-2018 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Gene3D G3DSA:3.30.420.110 118 252 4.3E-35 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SUPERFAMILY SSF55271 1 106 7.85E-40 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SMART SM00533 274 581 6.2E-105 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 PIRSF PIRSF037677 178 823 1.8E-130 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 PIRSF PIRSF037677 1 172 7.8E-25 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Pfam PF05190 MutS family domain IV 418 508 7.7E-29 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Pfam PF05188 MutS domain II 119 244 2.6E-30 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SUPERFAMILY SSF53150 105 257 9.16E-41 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Pfam PF01624 MutS domain I 1 110 7.6E-40 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 836 24.834 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Gene3D G3DSA:1.10.1420.10 257 549 1.9E-105 T 14-10-2018 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Pfam PF05192 MutS domain III 260 549 2.8E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SUPERFAMILY SSF48334 258 555 1.44E-89 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Pfam PF00488 MutS domain V 600 787 5.7E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SMART SM00534 597 784 7.8E-119 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 842 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Gene3D G3DSA:1.10.1420.10 377 493 1.9E-105 T 14-10-2018 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Gene3D G3DSA:3.40.1170.10 1 112 1.7E-49 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 Gene3D G3DSA:3.40.50.300 558 842 1.3E-100 T 14-10-2018 BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 SUPERFAMILY SSF52540 557 787 3.6E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13800 c858e4ccea10c42cf63161d7a7bf63cd 844 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 678 694 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD94_11770 e9afed7dbe6227893dca60136735a4d7 126 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 12 117 9.0E-56 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 BJD94_11770 e9afed7dbe6227893dca60136735a4d7 126 Pfam PF07226 Protein of unknown function (DUF1422) 11 121 4.5E-48 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 SMART SM00267 352 518 2.1E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 Gene3D G3DSA:3.30.70.270 350 518 3.9E-48 T 14-10-2018 BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 359 517 6.9E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 Gene3D G3DSA:3.30.450.350 89 311 1.5E-10 T 14-10-2018 BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 SUPERFAMILY SSF55073 368 517 1.73E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 SMART SM01079 84 280 1.0E-31 T 14-10-2018 IPR006189 CHASE domain BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 513 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_02285 1ed7c320295d2aebfc9a9525a316016a 519 Pfam PF03924 CHASE domain 89 278 5.0E-27 T 14-10-2018 IPR006189 CHASE domain BJD94_18185 14b4617260383b8b45686014a880c847 448 Gene3D G3DSA:2.40.170.10 37 448 1.0E-34 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 BJD94_18185 14b4617260383b8b45686014a880c847 448 Pfam PF02264 LamB porin 73 448 1.1E-37 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_18185 14b4617260383b8b45686014a880c847 448 SUPERFAMILY SSF56935 36 448 1.47E-81 T 14-10-2018 BJD94_18185 14b4617260383b8b45686014a880c847 448 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 98 442 3.0E-164 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_13460 a7b2638e474a76df270b86d02a46a33d 200 SUPERFAMILY SSF52972 1 196 1.26E-73 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_13460 a7b2638e474a76df270b86d02a46a33d 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.902 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BJD94_13460 a7b2638e474a76df270b86d02a46a33d 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.2E-64 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BJD94_13460 a7b2638e474a76df270b86d02a46a33d 200 Gene3D G3DSA:3.90.950.10 1 199 1.5E-82 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_13460 a7b2638e474a76df270b86d02a46a33d 200 Pfam PF01725 Ham1 family 4 191 1.7E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 Gene3D G3DSA:1.25.40.10 152 393 1.3E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 SMART SM00028 327 360 0.0056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.8E-113 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 SUPERFAMILY SSF48452 85 294 1.66E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 Pfam PF07719 Tetratricopeptide repeat 327 355 5.1E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 Pfam PF07219 HemY protein N-terminus 26 132 3.1E-26 T 14-10-2018 IPR010817 HemY, N-terminal BJD94_11540 14b92169f33e26628c24dabd42cf0dbf 393 SUPERFAMILY SSF48452 252 389 3.21E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05545 27e7f8cc6903da3988283b3adcf9b160 257 Gene3D G3DSA:1.20.1260.10 96 257 8.1E-55 T 14-10-2018 IPR012347 Ferritin-like BJD94_05545 27e7f8cc6903da3988283b3adcf9b160 257 Gene3D G3DSA:1.20.1260.10 7 76 2.0E-16 T 14-10-2018 IPR012347 Ferritin-like BJD94_05545 27e7f8cc6903da3988283b3adcf9b160 257 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 11 252 6.8E-117 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 BJD94_05545 27e7f8cc6903da3988283b3adcf9b160 257 PIRSF PIRSF020736 2 257 2.6E-91 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 BJD94_05545 27e7f8cc6903da3988283b3adcf9b160 257 SUPERFAMILY SSF47240 11 255 1.07E-73 T 14-10-2018 IPR009078 Ferritin-like superfamily BJD94_08430 8e6dac49754183f1623973a511b39b15 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 18 237 6.6E-73 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BJD94_08430 8e6dac49754183f1623973a511b39b15 239 SUPERFAMILY SSF64438 2 239 7.14E-84 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BJD94_08430 8e6dac49754183f1623973a511b39b15 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 238 3.7E-59 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BJD94_08430 8e6dac49754183f1623973a511b39b15 239 Gene3D G3DSA:3.60.140.10 1 238 7.6E-87 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 SUPERFAMILY SSF51735 401 529 2.1E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 Pfam PF02254 TrkA-N domain 402 511 9.8E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 Gene3D G3DSA:3.40.50.720 399 560 5.1E-36 T 14-10-2018 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.918 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 Pfam PF00999 Sodium/hydrogen exchanger family 12 372 4.8E-66 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 Gene3D G3DSA:1.20.1530.20 4 386 3.0E-84 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BJD94_12540 0f21c211304c0dfcbbb9bdad765fb8cf 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 2.5E-82 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 255 9.6E-14 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 9.6E-14 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 9.6E-14 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 9.6E-14 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 9.6E-14 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 SUPERFAMILY SSF53807 32 294 1.06E-58 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 Pfam PF01497 Periplasmic binding protein 37 273 2.8E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 Gene3D G3DSA:3.40.50.1980 123 296 1.2E-56 T 14-10-2018 BJD94_17465 df3158e0ebe17cbaf5b1f4a7311a3d4e 298 Gene3D G3DSA:3.40.50.1980 31 120 1.4E-24 T 14-10-2018 BJD94_06045 e11db1810ef39b94caf1d61459bf8360 130 PIRSF PIRSF007010 1 130 6.0E-56 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein BJD94_06045 e11db1810ef39b94caf1d61459bf8360 130 Gene3D G3DSA:3.30.300.250 19 129 3.2E-40 T 14-10-2018 BJD94_06045 e11db1810ef39b94caf1d61459bf8360 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 128 4.4E-49 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00267 480 650 7.7E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SUPERFAMILY SSF48452 179 351 7.6E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 Pfam PF13424 Tetratricopeptide repeat 183 250 4.3E-8 T 14-10-2018 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SUPERFAMILY SSF55073 496 648 1.8E-31 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 Pfam PF00990 Diguanylate cyclase, GGDEF domain 492 646 5.7E-32 T 14-10-2018 IPR000160 GGDEF domain BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 Gene3D G3DSA:3.30.70.270 480 650 2.2E-37 T 14-10-2018 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 Gene3D G3DSA:1.25.40.10 144 420 9.8E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 648 2.3E-32 T 14-10-2018 IPR000160 GGDEF domain BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00028 301 334 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00028 381 414 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00028 179 212 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00028 261 294 5.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14930 a06809fcd61c08fdcb4d52d65750d8cd 654 SMART SM00028 219 252 0.0095 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.6E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 Gene3D G3DSA:3.30.1340.10 1 85 2.6E-32 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.5E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_07220 d81f0ba3296863963e37c68e6253d0f6 85 SUPERFAMILY SSF55594 1 82 1.57E-26 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 151 4.8E-61 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 Gene3D G3DSA:3.20.20.70 2 154 2.9E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 SUPERFAMILY SSF102114 23 117 9.55E-8 T 14-10-2018 BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.4E-52 T 14-10-2018 BJD94_21655 e3aa2995de0f53b9bf671ed11065ed7b 155 PIRSF PIRSF000368 1 155 4.2E-59 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 BJD94_18425 1c9f3b80948b1aed61191cb1088e8b2e 161 Gene3D G3DSA:3.10.180.10 1 159 7.3E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_18425 1c9f3b80948b1aed61191cb1088e8b2e 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 1.4E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_18425 1c9f3b80948b1aed61191cb1088e8b2e 161 SUPERFAMILY SSF54593 1 150 2.55E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_18425 1c9f3b80948b1aed61191cb1088e8b2e 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 Gene3D G3DSA:3.40.1260.20 403 488 3.2E-6 T 14-10-2018 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 14-10-2018 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 SMART SM00316 37 122 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.4E-103 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BJD94_13155 321aae9e2b096ec2c4d3693ae23c4786 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 5.2E-173 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BJD94_14115 71ada7ad54a20fb281c8c7f7b682323d 380 Gene3D G3DSA:1.10.10.2840 255 380 8.0E-18 T 14-10-2018 BJD94_14115 71ada7ad54a20fb281c8c7f7b682323d 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 379 4.0E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BJD94_14115 71ada7ad54a20fb281c8c7f7b682323d 380 Pfam PF05651 Putative sugar diacid recognition 3 136 1.8E-51 T 14-10-2018 IPR008599 Putative sugar diacid recognition BJD94_04155 90d873e00346746db0fa012d7b09d455 885 Pfam PF02470 MlaD protein 47 138 7.7E-14 T 14-10-2018 IPR003399 Mce/MlaD BJD94_04155 90d873e00346746db0fa012d7b09d455 885 Pfam PF02470 MlaD protein 757 832 2.8E-6 T 14-10-2018 IPR003399 Mce/MlaD BJD94_04155 90d873e00346746db0fa012d7b09d455 885 Pfam PF02470 MlaD protein 283 374 1.1E-6 T 14-10-2018 IPR003399 Mce/MlaD BJD94_04155 90d873e00346746db0fa012d7b09d455 885 Pfam PF02470 MlaD protein 399 470 3.1E-6 T 14-10-2018 IPR003399 Mce/MlaD BJD94_04155 90d873e00346746db0fa012d7b09d455 885 Pfam PF02470 MlaD protein 163 223 1.1E-6 T 14-10-2018 IPR003399 Mce/MlaD BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 SUPERFAMILY SSF55781 28 158 5.67E-27 T 14-10-2018 BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 Gene3D G3DSA:3.30.450.40 13 165 5.0E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 SMART SM00267 151 318 1.6E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 Gene3D G3DSA:3.30.70.270 166 322 1.6E-44 T 14-10-2018 BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 SUPERFAMILY SSF55073 169 318 1.1E-39 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 Pfam PF01590 GAF domain 28 154 1.7E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 1.7E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 SMART SM00065 26 168 1.8E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_18630 aa367d1dfe4c1545198fbefafaefd404 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 318 3.6E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_05865 f61b7540f7fd028eac6d89e44641eb12 377 SUPERFAMILY SSF47240 3 341 2.08E-112 T 14-10-2018 IPR009078 Ferritin-like superfamily BJD94_05865 f61b7540f7fd028eac6d89e44641eb12 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 2.2E-48 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05865 f61b7540f7fd028eac6d89e44641eb12 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05865 f61b7540f7fd028eac6d89e44641eb12 377 Gene3D G3DSA:1.10.620.20 2 341 1.3E-144 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 205 404 2.5E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BJD94_12125 0057f6968e978af723c6711d9dd77975 598 ProSitePatterns PS00194 Thioredoxin family active site. 505 523 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_12125 0057f6968e978af723c6711d9dd77975 598 SUPERFAMILY SSF74863 34 147 8.37E-41 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Gene3D G3DSA:2.60.40.1250 30 163 8.9E-41 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Pfam PF11412 Disulphide bond corrector protein DsbC 36 146 4.5E-30 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Pfam PF13899 Thioredoxin-like 490 567 1.5E-12 T 14-10-2018 BJD94_12125 0057f6968e978af723c6711d9dd77975 598 SUPERFAMILY SSF52833 481 595 1.59E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Gene3D G3DSA:3.40.30.10 470 597 2.0E-32 T 14-10-2018 BJD94_12125 0057f6968e978af723c6711d9dd77975 598 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 597 38.413 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 Gene3D G3DSA:3.20.20.80 5 458 7.0E-201 T 14-10-2018 BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 Gene3D G3DSA:3.90.400.10 105 175 7.0E-201 T 14-10-2018 BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 Gene3D G3DSA:2.60.40.1180 467 544 2.5E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 SUPERFAMILY SSF51011 466 543 5.4E-20 T 14-10-2018 BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 539 1.4E-12 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 SMART SM00642 13 405 1.8E-155 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 SUPERFAMILY SSF51445 4 463 8.32E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_21415 15f2223e59aae888db4a4220e90db8fc 544 Pfam PF00128 Alpha amylase, catalytic domain 28 363 2.8E-123 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 Pfam PF07238 PilZ domain 134 234 1.8E-15 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 Pfam PF12945 Flagellar protein YcgR 38 127 6.3E-15 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 Gene3D G3DSA:2.30.110.10 23 136 1.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 SUPERFAMILY SSF141371 138 247 4.45E-33 T 14-10-2018 BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 Gene3D G3DSA:2.40.10.220 137 248 4.3E-38 T 14-10-2018 BJD94_19500 69aab8cb4332cd2d565d5ecde9d331fe 248 SUPERFAMILY SSF141371 24 137 5.49E-35 T 14-10-2018 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Gene3D G3DSA:2.40.50.140 66 129 3.2E-28 T 14-10-2018 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 SUPERFAMILY SSF50104 2 64 3.51E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 3.7E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Gene3D G3DSA:2.30.30.30 1 64 3.7E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.4E-23 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 PIRSF PIRSF005901 2 188 1.1E-62 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.0E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 SUPERFAMILY SSF50249 130 187 4.45E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.2E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 SMART SM01185 69 123 4.5E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Gene3D G3DSA:2.40.50.140 130 188 3.4E-27 T 14-10-2018 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.643 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 SMART SM00841 131 186 2.2E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD94_12210 30b59659ad2dc8235d5b68b11af37c17 188 SUPERFAMILY SSF50249 70 128 4.71E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 SUPERFAMILY SSF52540 35 381 2.4E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 Gene3D G3DSA:3.40.50.300 13 203 7.4E-10 T 14-10-2018 BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 SMART SM00487 20 214 0.0019 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 Gene3D G3DSA:3.40.50.300 233 406 3.7E-11 T 14-10-2018 BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 Pfam PF00271 Helicase conserved C-terminal domain 330 375 1.6E-5 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_09260 e08f5f12dd530d0955b6429fb714e677 676 Pfam PF04851 Type III restriction enzyme, res subunit 26 189 2.9E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_11990 cd045136eb3adf46456cda74e843848a 197 SUPERFAMILY SSF52141 3 190 7.52E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_11990 cd045136eb3adf46456cda74e843848a 197 Gene3D G3DSA:3.40.470.10 1 193 5.5E-72 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_11990 cd045136eb3adf46456cda74e843848a 197 SMART SM00986 27 183 8.3E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_11990 cd045136eb3adf46456cda74e843848a 197 SMART SM00987 27 183 8.3E-31 T 14-10-2018 BJD94_11990 cd045136eb3adf46456cda74e843848a 197 Pfam PF03167 Uracil DNA glycosylase superfamily 32 179 1.2E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 SUPERFAMILY SSF52540 5 235 2.97E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 Pfam PF00005 ABC transporter 19 174 3.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 2.7E-125 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 Gene3D G3DSA:3.40.50.300 4 246 8.7E-62 T 14-10-2018 BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 SMART SM00382 28 220 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19670 47e9409ba34186cc4872351d01b7ab2e 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 2.3E-24 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 SUPERFAMILY SSF51735 4 161 4.05E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 4.1E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 Gene3D G3DSA:1.10.3730.10 165 272 6.7E-35 T 14-10-2018 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 SUPERFAMILY SSF48179 162 270 1.07E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.6E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 PIRSF PIRSF000193 3 270 2.6E-75 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.389 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD94_13480 e5ba3d4b8e511dfdcefd6182b68a9bc9 272 Gene3D G3DSA:3.40.50.720 2 164 4.3E-50 T 14-10-2018 BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 Pfam PF17200 Single Cache domain 2 45 192 6.6E-45 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 SMART SM01049 42 133 4.8E-33 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 Gene3D G3DSA:3.30.450.20 28 203 1.1E-48 T 14-10-2018 BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 Gene3D G3DSA:3.30.565.10 313 447 5.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 Pfam PF07730 Histidine kinase 250 315 3.7E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 2.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 SUPERFAMILY SSF55874 322 443 3.01E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 SMART SM00387 353 447 3.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_01905 59b0fd35e9248d39fb704e467b2d9bb3 451 PIRSF PIRSF037314 1 451 7.4E-184 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 PIRSF PIRSF006809 3 423 1.4E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF54980 365 428 3.88E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.11060 18 138 1.0E-36 T 14-10-2018 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.581 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.300 197 369 2.2E-42 T 14-10-2018 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.5E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF52540 197 371 1.46E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-155 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_12405 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_00185 ba1fdff7942c1b5e20f8a248efa91304 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.035 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 BJD94_00185 ba1fdff7942c1b5e20f8a248efa91304 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.0E-47 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12840 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13075 44c423dd7e3c97d12c50161d0a2313ec 282 Gene3D G3DSA:3.40.50.300 28 183 1.8E-10 T 14-10-2018 BJD94_13075 44c423dd7e3c97d12c50161d0a2313ec 282 SUPERFAMILY SSF52540 5 261 2.51E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13075 44c423dd7e3c97d12c50161d0a2313ec 282 Pfam PF13401 AAA domain 42 168 2.2E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 5.6E-111 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 3.8E-74 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 SUPERFAMILY SSF53613 1 302 6.24E-85 T 14-10-2018 IPR029056 Ribokinase-like BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.134 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 Gene3D G3DSA:3.40.1190.20 1 301 6.5E-105 T 14-10-2018 IPR029056 Ribokinase-like BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 PRINTS PR00990 Ribokinase signature 217 228 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 PRINTS PR00990 Ribokinase signature 6 27 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 PRINTS PR00990 Ribokinase signature 33 52 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 PRINTS PR00990 Ribokinase signature 173 188 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 PRINTS PR00990 Ribokinase signature 105 118 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD94_20565 1e31dd48de783f26d382d1d1ccebc731 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 6.1E-14 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 2.8E-57 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 Gene3D G3DSA:3.30.110.10 34 129 1.2E-37 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 SUPERFAMILY SSF54364 1 36 2.48E-13 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 SUPERFAMILY SSF55200 41 129 3.4E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 1.6E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BJD94_02640 5ceb72fd48d447a34a301fb7a68f4ac3 129 Gene3D G3DSA:3.10.20.80 1 33 2.6E-14 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 2.1E-290 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Gene3D G3DSA:3.40.1770.10 22 544 1.9E-256 T 14-10-2018 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 1.6E-83 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 SUPERFAMILY SSF111326 11 557 1.31E-257 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Pfam PF17391 Urocanase N-terminal domain 17 143 2.1E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Pfam PF17392 Urocanase C-terminal domain 354 547 1.1E-91 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.074 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 PIRSF PIRSF001423 1 563 6.5E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 Gene3D G3DSA:3.40.50.10730 147 351 1.9E-256 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02605 646c0e5f300d147a997f30601df09a6e 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.6E-218 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 Pfam PF08439 Oligopeptidase F 106 174 5.3E-10 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 Gene3D G3DSA:1.20.140.70 12 159 4.6E-10 T 14-10-2018 BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 Pfam PF01432 Peptidase family M3 252 580 6.9E-22 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 SUPERFAMILY SSF55486 5 580 6.32E-91 T 14-10-2018 BJD94_04780 144742ff253884c87b5d585dedd4c1c8 599 Gene3D G3DSA:1.10.1370.20 219 597 1.3E-106 T 14-10-2018 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SMART SM00636 321 781 9.6E-121 T 14-10-2018 IPR011583 Chitinase II GO:0008061 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SUPERFAMILY SSF51055 22 87 1.44E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 ProSitePatterns PS01095 Chitinases family 18 active site. 470 478 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SUPERFAMILY SSF51445 315 785 2.9E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:3.20.20.80 300 651 3.2E-81 T 14-10-2018 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Pfam PF00704 Glycosyl hydrolases family 18 322 781 1.9E-85 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:2.60.40.10 192 283 7.5E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:3.10.50.10 726 752 1.1E-10 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:2.60.40.10 97 189 3.9E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Pfam PF06483 Chitinase C 809 974 3.3E-71 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SUPERFAMILY SSF54556 628 751 5.49E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:2.10.10.20 16 88 6.7E-15 T 14-10-2018 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 Gene3D G3DSA:3.20.20.80 753 782 1.1E-10 T 14-10-2018 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SMART SM00495 37 83 2.8E-15 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_21250 880d8660a32df39529bb2c0bd0830b87 1060 SMART SM00495 1012 1057 0.014 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_09905 ffa6609e4a864d93795baeb4b857df50 1517 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1177 1468 8.9E-41 T 14-10-2018 IPR031161 Peptidase family M60 domain BJD94_09905 ffa6609e4a864d93795baeb4b857df50 1517 Pfam PF13322 Domain of unknown function (DUF4092) 383 556 1.6E-92 T 14-10-2018 IPR025385 Domain of unknown function DUF4092 BJD94_09905 ffa6609e4a864d93795baeb4b857df50 1517 SMART SM01276 1083 1386 4.9E-88 T 14-10-2018 IPR031161 Peptidase family M60 domain BJD94_09905 ffa6609e4a864d93795baeb4b857df50 1517 Pfam PF17291 N-terminal domain of M60-like peptidases 1080 1162 4.5E-8 T 14-10-2018 IPR035423 M60-like domain, N-terminal BJD94_09905 ffa6609e4a864d93795baeb4b857df50 1517 Gene3D G3DSA:1.10.390.30 1316 1474 8.1E-12 T 14-10-2018 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.5E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 623 45.627 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Gene3D G3DSA:1.10.601.10 113 459 2.4E-139 T 14-10-2018 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF04545 Sigma-70, region 4 558 611 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Gene3D G3DSA:1.10.10.10 463 539 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 SUPERFAMILY SSF88659 463 536 2.25E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Gene3D G3DSA:1.10.220.120 1 64 5.3E-29 T 14-10-2018 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF04539 Sigma-70 region 3 469 544 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 SUPERFAMILY SSF88659 520 622 1.37E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 3.4E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Pfam PF04546 Sigma-70, non-essential region 139 359 2.3E-67 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 SUPERFAMILY SSF88946 115 457 2.22E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_09150 e4d59eea9e9e61a4f9de8ff02805f712 624 Gene3D G3DSA:1.10.10.10 540 624 4.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Pfam PF13437 HlyD family secretion protein 195 274 1.7E-6 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:1.10.287.470 98 161 7.9E-12 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:1.10.287.470 67 87 1.1E-7 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:2.40.50.100 196 230 1.8E-9 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:2.40.50.100 32 66 1.1E-7 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:1.10.287.470 168 195 1.8E-9 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 SUPERFAMILY SSF111369 100 157 1.44E-6 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Pfam PF13533 Biotin-lipoyl like 44 77 4.8E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_15905 d827babf890915b78b4eee538c34c94c 316 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 243 266 8.1E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 44 64 8.1E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 Gene3D G3DSA:2.40.30.170 231 310 1.8E-9 T 14-10-2018 BJD94_15905 d827babf890915b78b4eee538c34c94c 316 SUPERFAMILY SSF111369 32 87 1.18E-5 T 14-10-2018 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Pfam PF13241 Putative NAD(P)-binding 6 116 5.8E-30 T 14-10-2018 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 SUPERFAMILY SSF51735 1 113 5.91E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Gene3D G3DSA:1.10.8.210 150 206 8.1E-9 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Gene3D G3DSA:3.30.160.110 114 149 2.9E-13 T 14-10-2018 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Gene3D G3DSA:3.40.50.720 1 113 8.4E-34 T 14-10-2018 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 1.6E-13 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 1.0E-61 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.4E-6 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 SUPERFAMILY SSF53790 224 301 5.09E-5 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 Gene3D G3DSA:3.40.1010.10 210 306 1.7E-5 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD94_04410 5275494f443f1004187d945b5163c3fb 306 SUPERFAMILY SSF75615 115 201 8.5E-23 T 14-10-2018 BJD94_20260 2769224ac191da37993d626cb78d6eec 828 Gene3D G3DSA:2.60.40.10 47 124 2.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_20260 2769224ac191da37993d626cb78d6eec 828 SUPERFAMILY SSF52058 352 626 3.91E-22 T 14-10-2018 BJD94_20260 2769224ac191da37993d626cb78d6eec 828 Gene3D G3DSA:3.80.10.10 330 609 3.6E-37 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily BJD94_20260 2769224ac191da37993d626cb78d6eec 828 Gene3D G3DSA:3.80.10.10 610 823 4.9E-29 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily BJD94_20260 2769224ac191da37993d626cb78d6eec 828 Gene3D G3DSA:2.60.40.3010 147 223 1.8E-12 T 14-10-2018 BJD94_20260 2769224ac191da37993d626cb78d6eec 828 SUPERFAMILY SSF52058 612 793 9.86E-16 T 14-10-2018 BJD94_20260 2769224ac191da37993d626cb78d6eec 828 Gene3D G3DSA:2.60.40.10 229 329 4.7E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_07990 67f767b7343b8a3191c182f1b95f22ae 261 Pfam PF00950 ABC 3 transport family 161 241 4.0E-5 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BJD94_10580 2e382a549579f8299c03858c2cab938b 212 Gene3D G3DSA:3.40.50.150 42 203 2.9E-11 T 14-10-2018 BJD94_10580 2e382a549579f8299c03858c2cab938b 212 SUPERFAMILY SSF53335 47 198 2.67E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_10580 2e382a549579f8299c03858c2cab938b 212 Pfam PF13489 Methyltransferase domain 61 192 6.2E-17 T 14-10-2018 BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 SUPERFAMILY SSF52972 2 186 3.14E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 PIRSF PIRSF006305 1 193 1.5E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 Pfam PF02545 Maf-like protein 5 187 2.9E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.848 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 Gene3D G3DSA:3.90.950.10 5 193 4.8E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_05745 a978169549afca1243aec0b07dd3bc34 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 8.8E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 SUPERFAMILY SSF52540 269 475 4.92E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 SUPERFAMILY SSF52540 5 228 1.96E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 Pfam PF00005 ABC transporter 270 423 3.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 Gene3D G3DSA:3.40.50.300 266 496 4.2E-47 T 14-10-2018 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 Gene3D G3DSA:3.40.50.300 1 240 6.1E-57 T 14-10-2018 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 Pfam PF00005 ABC transporter 21 170 5.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 SMART SM00382 30 225 8.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20550 22353ee4a76c2d3a1ccedebe3ac99d3c 501 SMART SM00382 278 472 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 SUPERFAMILY SSF90123 29 344 8.24E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 Gene3D G3DSA:3.40.50.300 351 604 9.0E-93 T 14-10-2018 BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 Gene3D G3DSA:1.20.1560.10 11 340 1.3E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 SMART SM00382 386 577 1.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 SUPERFAMILY SSF52540 351 601 8.04E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 Pfam PF00664 ABC transporter transmembrane region 41 308 3.2E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_17715 268a55babfa03b5ee63fc724bca686cd 619 Pfam PF00005 ABC transporter 378 531 7.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 Pfam PF01694 Rhomboid family 133 271 2.4E-30 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 3.1E-115 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 Gene3D G3DSA:3.30.70.2350 1 70 2.1E-26 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.3E-34 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 SUPERFAMILY SSF144091 96 275 8.76E-42 T 14-10-2018 BJD94_11725 a7785d9b52a323fd80ae9a4df6624d80 280 Gene3D G3DSA:1.20.1540.10 94 273 3.2E-52 T 14-10-2018 IPR035952 Rhomboid-like superfamily BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 Gene3D G3DSA:3.40.50.10490 94 273 9.0E-37 T 14-10-2018 BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 Pfam PF01380 SIS domain 124 250 1.1E-14 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 SUPERFAMILY SSF53697 95 264 3.52E-35 T 14-10-2018 BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 SUPERFAMILY SSF46689 5 79 5.29E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 Gene3D G3DSA:1.10.10.10 3 82 9.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15900 e8e5000e352e471626f01096f2a50cf3 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 1.3E-15 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BJD94_03610 b3dd2f2080652a8ba460dd826f5585f6 105 Gene3D G3DSA:3.30.110.70 1 105 1.3E-32 T 14-10-2018 BJD94_03610 b3dd2f2080652a8ba460dd826f5585f6 105 Pfam PF01906 Putative heavy-metal-binding 1 103 9.7E-38 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_03610 b3dd2f2080652a8ba460dd826f5585f6 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.14 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_03610 b3dd2f2080652a8ba460dd826f5585f6 105 SUPERFAMILY SSF117782 1 104 7.72E-37 T 14-10-2018 IPR035439 UPF0145 domain superfamily BJD94_03520 b3dd2f2080652a8ba460dd826f5585f6 105 Gene3D G3DSA:3.30.110.70 1 105 1.3E-32 T 14-10-2018 BJD94_03520 b3dd2f2080652a8ba460dd826f5585f6 105 Pfam PF01906 Putative heavy-metal-binding 1 103 9.7E-38 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_03520 b3dd2f2080652a8ba460dd826f5585f6 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.14 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_03520 b3dd2f2080652a8ba460dd826f5585f6 105 SUPERFAMILY SSF117782 1 104 7.72E-37 T 14-10-2018 IPR035439 UPF0145 domain superfamily BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 Gene3D G3DSA:2.60.120.10 9 102 5.3E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 Gene3D G3DSA:1.10.10.60 166 270 1.4E-20 T 14-10-2018 BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 Pfam PF12833 Helix-turn-helix domain 191 265 1.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 SUPERFAMILY SSF46689 224 266 2.55E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 SUPERFAMILY SSF51182 30 191 6.94E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_17665 ac6b3ff8fa2fc797c54d9d42a16ef5ad 272 SMART SM00342 183 265 1.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Gene3D G3DSA:3.40.1390.10 3 107 1.7E-28 T 14-10-2018 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Gene3D G3DSA:3.40.1190.10 108 340 2.2E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Pfam PF01225 Mur ligase family, catalytic domain 25 103 3.3E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 SUPERFAMILY SSF53244 338 489 1.42E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 SUPERFAMILY SSF63418 5 107 2.22E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 SUPERFAMILY SSF53623 109 336 7.06E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 421 3.4E-24 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Pfam PF08245 Mur ligase middle domain 115 316 2.9E-53 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 489 3.7E-174 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 34.778 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BJD94_08915 cca19f41b57e4fcaee5d51c7e77ec934 493 Gene3D G3DSA:3.90.190.20 345 492 3.4E-56 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_19115 eabd8ac725dd566a38cebb2927a53282 200 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_19115 eabd8ac725dd566a38cebb2927a53282 200 PIRSF PIRSF001488 2 200 1.0E-62 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BJD94_19115 eabd8ac725dd566a38cebb2927a53282 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.7E-22 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BJD94_19115 eabd8ac725dd566a38cebb2927a53282 200 Gene3D G3DSA:3.40.30.10 18 200 2.3E-51 T 14-10-2018 BJD94_19115 eabd8ac725dd566a38cebb2927a53282 200 SUPERFAMILY SSF52833 23 198 4.95E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.3E-24 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 SUPERFAMILY SSF82808 62 176 3.53E-49 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 PIRSF PIRSF019401 63 177 8.5E-35 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 PIRSF PIRSF019401 1 69 1.3E-18 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 Gene3D G3DSA:1.20.1380.10 62 177 4.1E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 4.5E-46 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.524 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 SUPERFAMILY SSF47598 1 34 5.78E-14 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD94_07030 3bc8ab9d254813490baa64598741fa8c 177 Gene3D G3DSA:1.10.1220.10 1 40 1.6E-24 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD94_03760 d3cca1bc0e6c5debdcdb2e6e43023962 288 Gene3D G3DSA:3.90.1200.10 98 288 3.2E-62 T 14-10-2018 BJD94_03760 d3cca1bc0e6c5debdcdb2e6e43023962 288 Pfam PF03881 Fructosamine kinase 1 287 1.8E-122 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BJD94_03760 d3cca1bc0e6c5debdcdb2e6e43023962 288 Gene3D G3DSA:3.30.200.20 1 93 1.7E-21 T 14-10-2018 BJD94_03760 d3cca1bc0e6c5debdcdb2e6e43023962 288 SUPERFAMILY SSF56112 4 278 8.41E-40 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_03760 d3cca1bc0e6c5debdcdb2e6e43023962 288 PIRSF PIRSF006221 1 288 7.5E-108 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 BJD94_08735 641cd935b4854df06009fc7d778174cc 154 PIRSF PIRSF028680 1 154 4.8E-77 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 BJD94_01065 57a91150b972b1330dfc7a2c4bcb5d29 670 SMART SM00283 408 669 7.3E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01065 57a91150b972b1330dfc7a2c4bcb5d29 670 Gene3D G3DSA:1.10.287.950 341 670 9.2E-70 T 14-10-2018 BJD94_01065 57a91150b972b1330dfc7a2c4bcb5d29 670 SMART SM00304 341 393 2.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01065 57a91150b972b1330dfc7a2c4bcb5d29 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 636 4.7E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01065 57a91150b972b1330dfc7a2c4bcb5d29 670 SUPERFAMILY SSF58104 361 670 8.37E-72 T 14-10-2018 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.3E-54 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 Gene3D G3DSA:3.10.420.10 4 155 3.0E-57 T 14-10-2018 IPR035958 SecB-like superfamily BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.672 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 147 2.6E-58 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD94_12275 02e9025bcbcda04d8fac48d21256ca1d 155 SUPERFAMILY SSF54611 4 143 2.18E-51 T 14-10-2018 IPR035958 SecB-like superfamily BJD94_20090 4611bd79fb451168fab2b4577661323b 664 SMART SM00304 334 387 0.0057 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_20090 4611bd79fb451168fab2b4577661323b 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 629 4.7E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20090 4611bd79fb451168fab2b4577661323b 664 SUPERFAMILY SSF58104 355 664 2.49E-63 T 14-10-2018 BJD94_20090 4611bd79fb451168fab2b4577661323b 664 SMART SM00283 402 663 2.4E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20090 4611bd79fb451168fab2b4577661323b 664 Gene3D G3DSA:1.10.287.950 334 664 5.5E-62 T 14-10-2018 BJD94_20090 4611bd79fb451168fab2b4577661323b 664 Pfam PF08376 Nitrate and nitrite sensing 59 296 1.0E-34 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein BJD94_14190 dd78b6da8a08fb932a61dbd1e633386c 328 Gene3D G3DSA:1.10.3720.10 88 327 2.2E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14190 dd78b6da8a08fb932a61dbd1e633386c 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 7.0E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14190 dd78b6da8a08fb932a61dbd1e633386c 328 SUPERFAMILY SSF161098 93 324 2.88E-14 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 Gene3D G3DSA:3.40.50.2300 168 297 2.1E-77 T 14-10-2018 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 SMART SM00354 10 80 3.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 Gene3D G3DSA:3.40.50.2300 70 314 2.1E-77 T 14-10-2018 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 SUPERFAMILY SSF53822 70 336 1.35E-78 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 5.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 Pfam PF13377 Periplasmic binding protein-like domain 178 335 1.6E-37 T 14-10-2018 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 Gene3D G3DSA:1.10.260.40 2 66 1.1E-16 T 14-10-2018 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 BJD94_18515 1c7d00091fe4e1a7f0b3464949160b30 340 SUPERFAMILY SSF47413 10 60 1.85E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_02740 d259f3da967b464c9d07e7f5856b6d02 193 Gene3D G3DSA:3.40.50.880 1 192 4.0E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_02740 d259f3da967b464c9d07e7f5856b6d02 193 SUPERFAMILY SSF52317 3 173 1.15E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_02740 d259f3da967b464c9d07e7f5856b6d02 193 Pfam PF01965 DJ-1/PfpI family 3 171 1.8E-23 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD94_14905 e9aec79a190235270ed6a313e3789bf8 294 Gene3D G3DSA:3.40.800.10 55 230 8.1E-10 T 14-10-2018 BJD94_14905 e9aec79a190235270ed6a313e3789bf8 294 SUPERFAMILY SSF52768 60 263 3.78E-20 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily BJD94_14905 e9aec79a190235270ed6a313e3789bf8 294 Pfam PF00491 Arginase family 73 226 3.1E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_21870 e9aec79a190235270ed6a313e3789bf8 294 Gene3D G3DSA:3.40.800.10 55 230 8.1E-10 T 14-10-2018 BJD94_21870 e9aec79a190235270ed6a313e3789bf8 294 SUPERFAMILY SSF52768 60 263 3.78E-20 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily BJD94_21870 e9aec79a190235270ed6a313e3789bf8 294 Pfam PF00491 Arginase family 73 226 3.1E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD94_10505 3914049c7be33c1e64f6484f7af023c5 646 Pfam PF05170 AsmA family 1 571 1.4E-177 T 14-10-2018 IPR007844 AsmA BJD94_10710 d4274d978f0baa515ef11db8331ac73a 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD94_10710 d4274d978f0baa515ef11db8331ac73a 90 Gene3D G3DSA:3.10.20.30 2 90 7.7E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_10710 d4274d978f0baa515ef11db8331ac73a 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 77 1.3E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_10710 d4274d978f0baa515ef11db8331ac73a 90 SUPERFAMILY SSF54292 1 87 5.77E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 SUPERFAMILY SSF55021 88 176 1.28E-20 T 14-10-2018 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 PIRSF PIRSF028103 1 178 2.2E-63 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 SUPERFAMILY SSF55021 1 82 4.08E-17 T 14-10-2018 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 Gene3D G3DSA:3.30.70.260 87 180 1.7E-37 T 14-10-2018 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 Pfam PF13740 ACT domain 3 78 1.5E-24 T 14-10-2018 BJD94_00475 02153eb28f807289c3adf5e4a10acca8 180 Gene3D G3DSA:3.30.70.260 1 85 1.4E-24 T 14-10-2018 BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.4E-11 T 14-10-2018 BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 1.4E-24 T 14-10-2018 BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 Gene3D G3DSA:3.30.70.2020 8 322 1.2E-167 T 14-10-2018 BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 Gene3D G3DSA:1.10.150.210 115 177 1.2E-167 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 Gene3D G3DSA:3.40.50.1000 3 310 1.2E-167 T 14-10-2018 IPR023214 HAD superfamily BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 SUPERFAMILY SSF56784 104 311 2.03E-47 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_14470 8ae185e58fed4245e12c6c1b128f7f1b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 101 310 1.9E-82 T 14-10-2018 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.0E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 79 162 6.47E-27 T 14-10-2018 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.9E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.260 1 78 8.1E-33 T 14-10-2018 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.1150 80 157 4.6E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 Pfam PF01842 ACT domain 3 68 1.8E-16 T 14-10-2018 IPR002912 ACT domain BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 2 75 9.41E-23 T 14-10-2018 BJD94_09325 72f69bb411a8c2f428c4932f93542669 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 8.0E-38 T 14-10-2018 BJD94_21285 1ac8e4694dc439979184760f58a5fe56 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 188 1.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_21285 1ac8e4694dc439979184760f58a5fe56 222 Gene3D G3DSA:3.40.50.1000 9 207 2.2E-43 T 14-10-2018 IPR023214 HAD superfamily BJD94_21285 1ac8e4694dc439979184760f58a5fe56 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 3.5E-26 T 14-10-2018 BJD94_21285 1ac8e4694dc439979184760f58a5fe56 222 Gene3D G3DSA:1.10.150.240 21 88 2.2E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_21285 1ac8e4694dc439979184760f58a5fe56 222 SUPERFAMILY SSF56784 5 217 6.27E-45 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_10170 d74b9124e8e137a806df64744445dea9 235 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 1.7E-77 T 14-10-2018 BJD94_10170 d74b9124e8e137a806df64744445dea9 235 SUPERFAMILY SSF56112 44 192 2.43E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_10170 d74b9124e8e137a806df64744445dea9 235 Gene3D G3DSA:1.10.510.10 136 235 1.2E-13 T 14-10-2018 BJD94_10170 d74b9124e8e137a806df64744445dea9 235 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.708 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 Gene3D G3DSA:1.10.10.10 3 101 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 SMART SM00418 5 83 8.8E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 4.1E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_11640 5cd1df596fd6b7f94344c73953d50bba 111 SUPERFAMILY SSF46785 5 88 2.73E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16875 039b5901ee82954fe750619bba9e4687 115 SUPERFAMILY SSF46785 7 84 1.28E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16875 039b5901ee82954fe750619bba9e4687 115 Gene3D G3DSA:1.10.10.10 6 97 8.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16875 039b5901ee82954fe750619bba9e4687 115 Pfam PF01022 Bacterial regulatory protein, arsR family 14 58 4.0E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 SMART SM00418 5 84 1.9E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_16875 039b5901ee82954fe750619bba9e4687 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 SUPERFAMILY SSF58104 385 684 1.14E-64 T 14-10-2018 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 Gene3D G3DSA:1.10.287.950 355 685 9.1E-68 T 14-10-2018 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 580 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 549 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 SUPERFAMILY SSF103190 122 218 1.57E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 Pfam PF17201 Cache 3/Cache 2 fusion domain 47 330 9.6E-65 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 SMART SM00283 424 685 1.6E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 Gene3D G3DSA:3.30.450.20 190 335 5.4E-12 T 14-10-2018 BJD94_06365 0bc558225fd735cf6c87f7f938465e11 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 651 3.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 Pfam PF00691 OmpA family 78 169 2.0E-14 T 14-10-2018 IPR006665 OmpA-like domain BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 SUPERFAMILY SSF103088 48 152 1.01E-15 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 PRINTS PR01021 OMPA domain signature 124 140 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 PRINTS PR01021 OMPA domain signature 79 101 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 PRINTS PR01021 OMPA domain signature 109 124 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_19470 ef9e825244e4f49374f2606ff402206a 204 Gene3D G3DSA:3.30.1330.60 56 174 1.1E-16 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_08810 1dd32e4b67fd19cd961179cd9ab24145 273 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 270 50.349 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 BJD94_08810 1dd32e4b67fd19cd961179cd9ab24145 273 Gene3D G3DSA:3.40.50.1980 141 268 1.8E-25 T 14-10-2018 BJD94_08810 1dd32e4b67fd19cd961179cd9ab24145 273 Pfam PF01497 Periplasmic binding protein 24 245 4.8E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BJD94_08810 1dd32e4b67fd19cd961179cd9ab24145 273 SUPERFAMILY SSF53807 20 266 5.49E-57 T 14-10-2018 BJD94_08810 1dd32e4b67fd19cd961179cd9ab24145 273 Gene3D G3DSA:3.40.50.1980 21 135 4.1E-33 T 14-10-2018 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Pfam PF01743 Poly A polymerase head domain 52 181 1.8E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 269 2.3E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Gene3D G3DSA:3.30.460.10 18 177 6.4E-64 T 14-10-2018 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 SUPERFAMILY SSF81301 23 178 2.4E-42 T 14-10-2018 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Gene3D G3DSA:1.10.3090.10 179 429 4.0E-93 T 14-10-2018 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 453 37.748 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 SUPERFAMILY SSF81891 179 391 4.97E-49 T 14-10-2018 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 447 1.0E-162 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BJD94_14065 33f95033e731e1ceb13c99e9271d7789 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 327 442 1.4E-37 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain BJD94_04265 267e7b7812abe3bd08f5f4d13cecd7f2 386 Gene3D G3DSA:3.40.50.11010 112 215 1.2E-6 T 14-10-2018 BJD94_04265 267e7b7812abe3bd08f5f4d13cecd7f2 386 SUPERFAMILY SSF53756 11 385 1.88E-18 T 14-10-2018 BJD94_04265 267e7b7812abe3bd08f5f4d13cecd7f2 386 Gene3D G3DSA:3.40.50.2000 216 362 5.0E-34 T 14-10-2018 BJD94_09990 af00470fb8212e5aa5a557af3815db40 528 SUPERFAMILY SSF56112 131 435 4.76E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_09990 af00470fb8212e5aa5a557af3815db40 528 Gene3D G3DSA:3.90.1200.10 290 452 3.5E-5 T 14-10-2018 BJD94_09990 af00470fb8212e5aa5a557af3815db40 528 Gene3D G3DSA:3.90.550.10 13 219 3.6E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_09990 af00470fb8212e5aa5a557af3815db40 528 SUPERFAMILY SSF53448 21 230 2.97E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 Gene3D G3DSA:2.40.50.180 31 146 6.5E-24 T 14-10-2018 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 SMART SM00448 173 290 1.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 Pfam PF01584 CheW-like domain 14 149 6.6E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 Gene3D G3DSA:3.40.50.2300 163 302 1.5E-21 T 14-10-2018 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 SUPERFAMILY SSF50341 11 152 1.44E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 Gene3D G3DSA:2.30.30.40 17 141 6.5E-24 T 14-10-2018 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 SMART SM00260 11 147 1.3E-17 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 SUPERFAMILY SSF52172 171 293 5.55E-21 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 Pfam PF00072 Response regulator receiver domain 175 289 7.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_19955 4fab1b773f6b3d3709726cd926185357 307 PIRSF PIRSF002867 1 298 3.1E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 SUPERFAMILY SSF53671 4 333 3.8E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 7.3E-134 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.3E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 Gene3D G3DSA:3.40.50.1370 151 319 2.0E-146 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 4.0E-58 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.82 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 Gene3D G3DSA:3.40.50.1370 5 329 2.0E-146 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_13210 5e3c270a5197ce8a9738cfb489699415 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BJD94_04835 f9d5300a0d86f55bdea07d5febc1a6b5 130 SUPERFAMILY SSF52540 21 99 1.49E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04835 f9d5300a0d86f55bdea07d5febc1a6b5 130 Gene3D G3DSA:3.40.50.300 16 123 2.5E-10 T 14-10-2018 BJD94_04835 f9d5300a0d86f55bdea07d5febc1a6b5 130 Pfam PF03846 Cell division inhibitor SulA 26 96 3.3E-5 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 SUPERFAMILY SSF52833 3 81 3.94E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 Pfam PF00462 Glutaredoxin 3 69 3.6E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.3E-47 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 BJD94_04970 4bcc7ccefffcc162671a7ebd234332b7 87 Gene3D G3DSA:3.40.30.10 1 84 1.3E-25 T 14-10-2018 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 397 548 1.2E-25 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 SUPERFAMILY SSF116726 309 379 8.11E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 SUPERFAMILY SSF116726 222 286 1.7E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Pfam PF02080 TrkA-C domain 310 379 1.9E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Pfam PF02080 TrkA-C domain 223 286 1.1E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 564 3.4E-202 T 14-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Gene3D G3DSA:3.30.70.1450 214 292 1.0E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Pfam PF06826 Predicted Permease Membrane Region 393 562 2.7E-32 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Pfam PF06826 Predicted Permease Membrane Region 15 180 4.4E-30 T 14-10-2018 IPR006512 YidE/YbjL duplication BJD94_16960 1c18e9b4abd6e84d2c8d2225dec69469 571 Gene3D G3DSA:3.30.70.1450 307 384 3.6E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_05180 8c6c362d2f78746ab3f674e97290cd86 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 5.1E-47 T 14-10-2018 IPR014320 Phage shock protein, PspC BJD94_05180 8c6c362d2f78746ab3f674e97290cd86 139 Pfam PF04024 PspC domain 14 72 1.5E-14 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BJD94_15760 8407453b8a74d83453dade68b41ff916 543 Gene3D G3DSA:1.20.210.10 25 543 1.6E-219 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 542 4.2E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 SUPERFAMILY SSF81442 36 542 7.59E-194 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 2.1E-151 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15760 8407453b8a74d83453dade68b41ff916 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 7.8E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 7.2E-64 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.1E-163 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 SUPERFAMILY SSF52096 5 318 3.83E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.427 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD94_00315 8d437094930fbca336600d3432fa0ca5 319 Gene3D G3DSA:3.90.226.10 2 318 1.5E-119 T 14-10-2018 BJD94_14970 029728443a08b02f41f2d92bae192fb7 192 Gene3D G3DSA:1.10.10.10 133 192 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14970 029728443a08b02f41f2d92bae192fb7 192 SMART SM01012 131 186 2.4E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 BJD94_14970 029728443a08b02f41f2d92bae192fb7 192 Pfam PF03861 ANTAR domain 135 186 1.0E-15 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 BJD94_14970 029728443a08b02f41f2d92bae192fb7 192 SUPERFAMILY SSF52172 5 186 2.29E-21 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 Gene3D G3DSA:3.40.190.10 135 385 1.9E-134 T 14-10-2018 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 1.6E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 Gene3D G3DSA:3.40.190.10 45 354 1.9E-134 T 14-10-2018 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 SUPERFAMILY SSF53850 25 392 1.33E-89 T 14-10-2018 BJD94_19800 54e48b502443a4f83d42fc80e9f95e7e 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BJD94_19655 c70b6a1a332dfe8759ac605af157bc01 273 Pfam PF12849 PBP superfamily domain 19 258 1.2E-40 T 14-10-2018 IPR024370 PBP domain BJD94_19655 c70b6a1a332dfe8759ac605af157bc01 273 SUPERFAMILY SSF53850 16 273 9.92E-72 T 14-10-2018 BJD94_19655 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 99 233 2.1E-83 T 14-10-2018 BJD94_19655 c70b6a1a332dfe8759ac605af157bc01 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 271 3.9E-77 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 BJD94_19655 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 30 270 2.1E-83 T 14-10-2018 BJD94_16220 5c320044c927d52248efb420a32abf79 504 Pfam PF13552 Protein of unknown function (DUF4127) 4 496 3.0E-161 T 14-10-2018 IPR025394 Protein of unknown function DUF4127 BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 SUPERFAMILY SSF54826 1 101 1.33E-24 T 14-10-2018 BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 Gene3D G3DSA:3.30.390.10 3 306 3.5E-116 T 14-10-2018 IPR029017 Enolase-like, N-terminal BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 Gene3D G3DSA:3.20.20.120 100 301 3.5E-116 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 SMART SM00922 117 214 7.4E-7 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 Pfam PF13378 Enolase C-terminal domain-like 126 278 2.6E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 SUPERFAMILY SSF51604 103 314 2.1E-49 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 5.0E-108 T 14-10-2018 BJD94_06540 d28fbfbb59d9f02fd1f133e2df840d00 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 327 21.668 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 494 7.2E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 SUPERFAMILY SSF51905 11 330 7.4E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 355 367 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 Pfam PF01266 FAD dependent oxidoreductase 13 331 2.5E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 Gene3D G3DSA:3.50.50.60 13 374 1.6E-143 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 360 370 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 SUPERFAMILY SSF54373 234 327 3.14E-7 T 14-10-2018 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 Gene3D G3DSA:3.30.9.10 90 328 1.6E-143 T 14-10-2018 BJD94_14700 f2c19b80dc56ad8968248ed771875bdf 513 Gene3D G3DSA:1.10.8.870 400 469 3.6E-20 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD94_10520 40a82876dc05bffe464f29657fd3b1a1 313 Pfam PF03631 Virulence factor BrkB 33 280 1.1E-57 T 14-10-2018 IPR017039 Virulence factor BrkB BJD94_10520 40a82876dc05bffe464f29657fd3b1a1 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 3.8E-82 T 14-10-2018 IPR017039 Virulence factor BrkB BJD94_10520 40a82876dc05bffe464f29657fd3b1a1 313 PIRSF PIRSF035875 8 299 4.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB BJD94_10520 40a82876dc05bffe464f29657fd3b1a1 313 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.88 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 Gene3D G3DSA:3.40.50.300 4 192 6.8E-43 T 14-10-2018 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 Pfam PF07670 Nucleoside recognition 509 691 9.2E-37 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 8.3E-178 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 BJD94_06920 a97b18ac6adcc9febedb090017429aaf 758 SUPERFAMILY SSF52540 4 191 4.33E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02755 76d43a6fa54ff070724ddc17db829c4d 228 SUPERFAMILY SSF55729 103 219 1.32E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02755 76d43a6fa54ff070724ddc17db829c4d 228 Pfam PF13673 Acetyltransferase (GNAT) domain 110 223 1.2E-8 T 14-10-2018 IPR000182 GNAT domain BJD94_02755 76d43a6fa54ff070724ddc17db829c4d 228 Gene3D G3DSA:3.40.630.30 92 216 1.6E-15 T 14-10-2018 BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 9.3E-38 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 Gene3D G3DSA:3.10.129.10 2 137 1.6E-41 T 14-10-2018 BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 Pfam PF03061 Thioesterase superfamily 22 107 5.9E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 SUPERFAMILY SSF54637 6 134 1.83E-40 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 132 1.8E-49 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 BJD94_01505 3b269f458c629d3ca685a0ad9579ed5c 139 PIRSF PIRSF003230 2 138 1.0E-46 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BJD94_03720 1e4d4ad8c984fcdeab8fbe93bf5ffa13 144 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 29 141 9.1E-16 T 14-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 BJD94_03720 1e4d4ad8c984fcdeab8fbe93bf5ffa13 144 Gene3D G3DSA:3.90.1720.70 1 144 1.0E-13 T 14-10-2018 BJD94_20640 28448d0345457579fa26a6fc46c3a32c 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 188 198 6.1E-6 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_20640 28448d0345457579fa26a6fc46c3a32c 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 361 379 6.1E-6 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_20640 28448d0345457579fa26a6fc46c3a32c 441 Pfam PF13629 Pilus formation protein N terminal region 26 93 1.3E-19 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal BJD94_20640 28448d0345457579fa26a6fc46c3a32c 441 Pfam PF00263 Bacterial type II and III secretion system protein 242 396 5.4E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF54211 1 181 8.6E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF55666 153 236 1.14E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 Gene3D G3DSA:3.30.230.70 13 238 2.1E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 7.0E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.006 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 9.6E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD94_10255 658e75b1198924c353e4bff213d5d76c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.8E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Gene3D G3DSA:3.30.450.20 9 108 1.9E-5 T 14-10-2018 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Gene3D G3DSA:3.30.565.10 190 343 1.8E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 SUPERFAMILY SSF55874 177 338 9.69E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Gene3D G3DSA:1.10.287.130 109 185 1.2E-9 T 14-10-2018 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 2.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 SUPERFAMILY SSF47384 117 188 3.34E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 Pfam PF13188 PAS domain 18 59 1.9E-6 T 14-10-2018 IPR000014 PAS domain BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 SMART SM00388 122 188 6.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 SMART SM00387 231 337 2.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00575 d2c873efef4bca477a2188f11281a65c 344 SUPERFAMILY SSF55785 18 85 2.3E-7 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_04455 9932d73f39c010927c0f9bd3cf91da71 467 Gene3D G3DSA:1.10.287.950 139 466 7.1E-63 T 14-10-2018 BJD94_04455 9932d73f39c010927c0f9bd3cf91da71 467 SMART SM00283 205 466 3.8E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04455 9932d73f39c010927c0f9bd3cf91da71 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.8E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04455 9932d73f39c010927c0f9bd3cf91da71 467 SUPERFAMILY SSF58104 157 466 1.83E-65 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 Gene3D G3DSA:3.50.50.60 147 248 6.4E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 Gene3D G3DSA:1.10.1060.10 11 146 3.3E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 SUPERFAMILY SSF51971 145 399 1.35E-69 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.1E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 469 3.0E-253 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 SUPERFAMILY SSF46548 6 157 1.46E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 Gene3D G3DSA:3.50.50.60 249 398 4.9E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.4E-36 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.4E-36 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.4E-36 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.4E-36 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.4E-36 T 14-10-2018 BJD94_08790 75c966519538c96bb12ee7aa4bcdbde6 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Gene3D G3DSA:3.30.70.890 203 358 7.7E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 6.8E-22 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 SUPERFAMILY SSF54211 2 204 5.54E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Pfam PF08544 GHMP kinases C terminal 280 361 1.8E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PIRSF PIRSF000530 1 385 8.8E-129 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 14-10-2018 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 14-10-2018 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 14-10-2018 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 14-10-2018 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 SUPERFAMILY SSF55060 206 382 2.24E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Gene3D G3DSA:3.30.230.10 23 202 7.7E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.071 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_14650 bde091f1c59dd335d8433e014a593c35 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.9E-149 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BJD94_01840 ae74a61532370679f08938e9cbef84ea 215 Gene3D G3DSA:3.40.50.10990 21 191 8.9E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_01840 ae74a61532370679f08938e9cbef84ea 215 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 40 212 5.6E-62 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_01840 ae74a61532370679f08938e9cbef84ea 215 SUPERFAMILY SSF142695 36 189 3.79E-54 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_01840 ae74a61532370679f08938e9cbef84ea 215 Pfam PF00925 GTP cyclohydrolase II 36 188 2.6E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_01840 ae74a61532370679f08938e9cbef84ea 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 20 215 38.597 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_17425 f67d243e9045b7d4f15eeb3d7e7b2adc 240 SMART SM00382 45 232 6.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17425 f67d243e9045b7d4f15eeb3d7e7b2adc 240 Gene3D G3DSA:3.40.50.300 14 240 1.7E-72 T 14-10-2018 BJD94_17425 f67d243e9045b7d4f15eeb3d7e7b2adc 240 Pfam PF00005 ABC transporter 36 184 7.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_17425 f67d243e9045b7d4f15eeb3d7e7b2adc 240 SUPERFAMILY SSF52540 16 237 2.46E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17425 f67d243e9045b7d4f15eeb3d7e7b2adc 240 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 Gene3D G3DSA:2.30.30.40 36 154 2.4E-29 T 14-10-2018 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 SUPERFAMILY SSF52172 193 318 4.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 SUPERFAMILY SSF50341 7 165 5.36E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 PIRSF PIRSF002867 1 325 1.3E-100 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 SMART SM00260 14 160 1.2E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 Pfam PF01584 CheW-like domain 37 162 2.1E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 Gene3D G3DSA:2.40.50.180 44 160 2.4E-29 T 14-10-2018 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 Gene3D G3DSA:3.40.50.2300 179 321 1.5E-28 T 14-10-2018 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 SMART SM00448 193 318 4.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20580 0b9124478b8b034c23bdb8c1e30a7128 327 Pfam PF00072 Response regulator receiver domain 195 313 7.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 Gene3D G3DSA:2.40.50.100 56 216 2.1E-52 T 14-10-2018 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 7.6E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 Gene3D G3DSA:1.10.287.470 90 176 2.1E-52 T 14-10-2018 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 Gene3D G3DSA:2.40.420.20 40 367 2.1E-52 T 14-10-2018 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 SUPERFAMILY SSF111369 49 253 2.88E-15 T 14-10-2018 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 Gene3D G3DSA:2.40.30.170 45 307 2.1E-52 T 14-10-2018 BJD94_17445 2cba74aa74cc7d7a5eb4da89b58d8c2a 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 367 1.2E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_00085 08cdfd1567764b6cdaf28df3ab699489 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 252 35.565 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_00085 08cdfd1567764b6cdaf28df3ab699489 255 Pfam PF04205 FMN-binding domain 142 237 1.4E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_00085 08cdfd1567764b6cdaf28df3ab699489 255 SMART SM00900 142 240 1.0E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_00085 08cdfd1567764b6cdaf28df3ab699489 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 248 6.2E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_00085 08cdfd1567764b6cdaf28df3ab699489 255 PIRSF PIRSF009437 1 255 1.3E-104 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_14865 08cdfd1567764b6cdaf28df3ab699489 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 252 35.565 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_14865 08cdfd1567764b6cdaf28df3ab699489 255 Pfam PF04205 FMN-binding domain 142 237 1.4E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_14865 08cdfd1567764b6cdaf28df3ab699489 255 SMART SM00900 142 240 1.0E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 BJD94_14865 08cdfd1567764b6cdaf28df3ab699489 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 248 6.2E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_14865 08cdfd1567764b6cdaf28df3ab699489 255 PIRSF PIRSF009437 1 255 1.3E-104 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 Pfam PF01389 OmpA-like transmembrane domain 27 182 5.8E-21 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 Gene3D G3DSA:3.30.1330.60 227 351 5.1E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 ProSitePatterns PS01068 OmpA-like domain. 276 320 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 Pfam PF00691 OmpA family 243 338 7.8E-25 T 14-10-2018 IPR006665 OmpA-like domain BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 SUPERFAMILY SSF103088 234 344 1.44E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 Gene3D G3DSA:2.40.160.20 13 208 2.8E-40 T 14-10-2018 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 SUPERFAMILY SSF56925 24 183 6.02E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 PRINTS PR01021 OMPA domain signature 274 289 1.2E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 PRINTS PR01021 OMPA domain signature 244 266 1.2E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_15725 8b27da193e99a1958b11e853dbe91873 357 PRINTS PR01021 OMPA domain signature 289 305 1.2E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.038 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 SUPERFAMILY SSF52540 70 294 2.84E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.5E-94 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 SMART SM00382 93 247 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.6E-226 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 7.8E-9 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 Pfam PF13481 AAA domain 82 224 5.9E-13 T 14-10-2018 BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 SUPERFAMILY SSF54211 257 455 1.74E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 Gene3D G3DSA:3.30.230.10 328 458 5.2E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_14480 85b4d9e6c3534d9e27da25dac6627f13 459 Gene3D G3DSA:3.40.50.300 68 281 4.7E-40 T 14-10-2018 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 3.3E-134 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 PIRSF PIRSF006621 1 321 2.7E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:1.10.1200.80 252 322 3.7E-8 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:3.20.20.70 6 248 1.2E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 SUPERFAMILY SSF51395 10 319 1.03E-90 T 14-10-2018 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.219 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_12045 756b8622d49308e8771e6e5d8c3f9908 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 4.3E-112 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 6.0E-92 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 Pfam PF03379 CcmB protein 5 219 4.4E-90 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.8E-69 T 14-10-2018 BJD94_00725 ae13cdb976667f42406119f2f772fbcc 222 PIRSF PIRSF002764 1 222 1.9E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BJD94_09105 e64deb84188c91ea4b6037c064f99b4b 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 4.0E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BJD94_09105 e64deb84188c91ea4b6037c064f99b4b 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 9.6E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BJD94_09105 e64deb84188c91ea4b6037c064f99b4b 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.608 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BJD94_17290 b9e7d12c08c2dc355f8190a5008bd754 82 SUPERFAMILY SSF101744 1 81 2.35E-23 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 BJD94_17290 b9e7d12c08c2dc355f8190a5008bd754 82 Gene3D G3DSA:2.30.30.400 2 80 2.8E-15 T 14-10-2018 IPR038626 Rof-like superfamily BJD94_17290 b9e7d12c08c2dc355f8190a5008bd754 82 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.3E-29 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 4.0E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.230.10 75 167 5.2E-36 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.160.20 2 74 4.0E-32 T 14-10-2018 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 2.7E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54768 8 76 4.08E-24 T 14-10-2018 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.696 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_09795 c616a9c7dd2fbae50df050b059a3a974 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 SUPERFAMILY SSF56349 105 386 2.06E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Gene3D G3DSA:1.10.443.10 215 388 7.4E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Pfam PF13356 Arm DNA-binding domain 8 94 2.5E-18 T 14-10-2018 IPR025166 Integrase, DNA-binding domain BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Gene3D G3DSA:3.30.160.390 6 107 4.6E-31 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 155 1.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Gene3D G3DSA:1.10.150.130 108 214 8.3E-29 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD94_09160 ea8077ed87a3280a5aa42c1188f9819d 413 Pfam PF00589 Phage integrase family 214 376 1.3E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD94_12835 68ae077995d760c467513abcba461bb3 100 Gene3D G3DSA:2.40.50.140 1 100 9.7E-31 T 14-10-2018 BJD94_12835 68ae077995d760c467513abcba461bb3 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.333 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BJD94_12835 68ae077995d760c467513abcba461bb3 100 SUPERFAMILY SSF50249 1 98 3.02E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12835 68ae077995d760c467513abcba461bb3 100 Pfam PF00436 Single-strand binding protein family 3 87 4.6E-8 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD94_12835 68ae077995d760c467513abcba461bb3 100 PIRSF PIRSF003135 1 100 7.9E-45 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BJD94_12835 68ae077995d760c467513abcba461bb3 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 97 1.0E-32 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 Gene3D G3DSA:3.20.20.10 1 236 3.1E-86 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 Pfam PF01168 Alanine racemase, N-terminal domain 24 230 4.4E-32 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.7E-87 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 PIRSF PIRSF004848 1 236 1.9E-75 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 SUPERFAMILY SSF51419 1 228 3.14E-81 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_13485 0b2ec4374600908f1d3a97fd13abb169 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.142 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 SUPERFAMILY SSF56821 1 551 6.54E-194 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.199 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Gene3D G3DSA:1.20.1270.20 1 143 3.8E-37 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Gene3D G3DSA:3.40.50.2030 383 551 3.3E-60 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 PIRSF PIRSF000076 1 553 2.2E-241 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 2.1E-162 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Gene3D G3DSA:3.40.50.2030 237 382 6.3E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 Gene3D G3DSA:1.20.1270.20 153 235 2.6E-28 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_05120 b354d0bf7818d3fc3fe9a2661d81725c 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 2.0E-225 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 BJD94_01320 ddeb3272d212d40933efc6d69a19f816 232 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 231 35.332 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BJD94_01320 ddeb3272d212d40933efc6d69a19f816 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 7.4E-32 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BJD94_01320 ddeb3272d212d40933efc6d69a19f816 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 7.9E-19 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BJD94_01320 ddeb3272d212d40933efc6d69a19f816 232 PIRSF PIRSF037208 1 232 5.4E-83 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BJD94_01320 ddeb3272d212d40933efc6d69a19f816 232 SUPERFAMILY SSF55729 80 231 4.03E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_12085 b303b45724b63bbfd8a7be4b6510d474 396 SUPERFAMILY SSF103473 8 373 2.62E-35 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_12085 b303b45724b63bbfd8a7be4b6510d474 396 Gene3D G3DSA:1.20.1250.20 2 183 2.9E-16 T 14-10-2018 BJD94_12085 b303b45724b63bbfd8a7be4b6510d474 396 Pfam PF12832 MFS_1 like family 13 361 9.0E-41 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain BJD94_12085 b303b45724b63bbfd8a7be4b6510d474 396 Gene3D G3DSA:1.20.1250.20 195 386 6.8E-31 T 14-10-2018 BJD94_12085 b303b45724b63bbfd8a7be4b6510d474 396 PIRSF PIRSF004925 2 389 6.9E-104 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter BJD94_13505 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 1 187 5.3E-70 T 14-10-2018 BJD94_13505 4eab0581aaebeda26ba67fc75b57a53b 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 5.5E-52 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 BJD94_13505 4eab0581aaebeda26ba67fc75b57a53b 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.241 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 BJD94_13505 4eab0581aaebeda26ba67fc75b57a53b 187 SUPERFAMILY SSF143456 1 187 3.01E-67 T 14-10-2018 BJD94_14280 0732f18b9450034e563fe892628b5ae4 209 PIRSF PIRSF005461 1 209 1.1E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BJD94_14280 0732f18b9450034e563fe892628b5ae4 209 Gene3D G3DSA:3.40.50.150 30 209 2.7E-60 T 14-10-2018 BJD94_14280 0732f18b9450034e563fe892628b5ae4 209 SUPERFAMILY SSF53335 30 209 1.1E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_14280 0732f18b9450034e563fe892628b5ae4 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.8E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BJD94_14280 0732f18b9450034e563fe892628b5ae4 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.651 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 452 553 5.3E-46 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.1E-7 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 SUPERFAMILY SSF54373 212 310 1.65E-32 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 SUPERFAMILY SSF51905 3 454 2.06E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 Gene3D G3DSA:3.30.70.20 457 550 3.3E-33 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.6E-6 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 2.6E-6 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 Gene3D G3DSA:3.50.50.60 7 388 2.6E-175 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 SUPERFAMILY SSF54862 456 555 5.28E-26 T 14-10-2018 BJD94_15335 ec6edcc6b93adac55cb5443044d90277 555 Gene3D G3DSA:3.30.9.90 79 456 2.6E-175 T 14-10-2018 BJD94_21805 c1ddad44feba590bfc68c2da985b3137 285 Pfam PF01226 Formate/nitrite transporter 8 257 4.1E-61 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BJD94_21805 c1ddad44feba590bfc68c2da985b3137 285 Gene3D G3DSA:1.20.1080.10 1 250 5.8E-66 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 Gene3D G3DSA:3.30.70.360 177 292 9.6E-80 T 14-10-2018 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.0E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 3.9E-127 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 Gene3D G3DSA:3.40.630.10 28 360 9.6E-80 T 14-10-2018 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 63.971 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 SUPERFAMILY SSF53187 3 377 6.0E-55 T 14-10-2018 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 SUPERFAMILY SSF55031 177 291 1.64E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD94_12740 24f329a816a05fafd509558f0e18d60c 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 2.2E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD94_10435 5fb24210a4c1216834cea909974887c0 163 PIRSF PIRSF006291 2 162 8.1E-41 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 BJD94_10435 5fb24210a4c1216834cea909974887c0 163 Pfam PF04612 Type II secretion system (T2SS), protein M 7 162 8.8E-55 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 BJD94_10435 5fb24210a4c1216834cea909974887c0 163 SUPERFAMILY SSF103054 85 162 4.97E-24 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily BJD94_10435 5fb24210a4c1216834cea909974887c0 163 Gene3D G3DSA:3.30.1360.100 85 163 6.2E-31 T 14-10-2018 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:3.30.70.920 53 147 2.1E-24 T 14-10-2018 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 3.0E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.5E-20 T 14-10-2018 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 SMART SM00344 1 110 2.3E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF54909 63 149 1.32E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:1.10.10.10 1 52 2.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF46785 1 60 4.21E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_16155 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 Gene3D G3DSA:1.10.3860.10 3 420 6.5E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 2.9E-118 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 SUPERFAMILY SSF118215 15 403 1.44E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.8E-53 T 14-10-2018 BJD94_06020 506fa5408df4adbc0f47430b898397de 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.8E-53 T 14-10-2018 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 Pfam PF00089 Trypsin 32 311 4.7E-29 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 Gene3D G3DSA:2.40.10.10 160 314 9.3E-24 T 14-10-2018 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 374 394 3.6E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 SUPERFAMILY SSF50494 32 315 4.09E-41 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 SMART SM00020 20 311 2.3E-29 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 58 63 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 260 271 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 Gene3D G3DSA:2.40.10.10 32 154 2.2E-19 T 14-10-2018 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 48 63 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_08290 1b82035a9710aceeebbfcbd51b6ade1b 396 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 259 271 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_05220 fce25ffd3adab3c13191a7fd75a29757 261 SMART SM00382 38 227 7.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_05220 fce25ffd3adab3c13191a7fd75a29757 261 Pfam PF00005 ABC transporter 30 178 3.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_05220 fce25ffd3adab3c13191a7fd75a29757 261 SUPERFAMILY SSF52540 3 252 8.68E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05220 fce25ffd3adab3c13191a7fd75a29757 261 Gene3D G3DSA:3.40.50.300 1 259 1.7E-69 T 14-10-2018 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 SUPERFAMILY SSF64518 1 384 9.81E-97 T 14-10-2018 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.10.8.410 334 384 1.2E-21 T 14-10-2018 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00700 Bacterial flagellin C-terminal helical region 298 383 1.6E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:3.30.70.2120 174 282 6.3E-75 T 14-10-2018 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.20.1330.10 44 333 6.3E-75 T 14-10-2018 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 76 95 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 37 54 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 111 134 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_07250 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF07196 Flagellin hook IN motif 209 252 2.0E-8 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_09800 daaa3ab88a31c0ee04775d685cefcddc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.4E-44 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09800 daaa3ab88a31c0ee04775d685cefcddc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.9E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09800 daaa3ab88a31c0ee04775d685cefcddc 117 SUPERFAMILY SSF53137 3 115 1.66E-51 T 14-10-2018 BJD94_09800 daaa3ab88a31c0ee04775d685cefcddc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.753 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09800 daaa3ab88a31c0ee04775d685cefcddc 117 Gene3D G3DSA:3.30.420.100 1 117 1.6E-43 T 14-10-2018 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PIRSF PIRSF004862 18 570 6.8E-172 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 Pfam PF01514 Secretory protein of YscJ/FliF family 53 239 1.0E-54 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 44 568 2.1E-75 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 Pfam PF08345 Flagellar M-ring protein C-terminal 272 442 8.5E-41 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PRINTS PR01009 Flagellar M-ring protein signature 365 389 1.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PRINTS PR01009 Flagellar M-ring protein signature 140 158 1.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PRINTS PR01009 Flagellar M-ring protein signature 215 233 1.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PRINTS PR01009 Flagellar M-ring protein signature 172 186 1.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 PRINTS PR01009 Flagellar M-ring protein signature 285 303 1.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD94_00590 f19888f00bc9127990f272b6010a37f7 570 Gene3D G3DSA:3.30.300.30 142 237 3.0E-9 T 14-10-2018 BJD94_21705 6c0ada4cb1a075e3acaae078f8bcc041 521 Pfam PF08811 Protein of unknown function (DUF1800) 48 518 3.1E-92 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.5E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 Gene3D G3DSA:2.30.170.50 1 84 1.3E-25 T 14-10-2018 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.093 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 SUPERFAMILY SSF143800 1 81 2.59E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 Pfam PF01197 Ribosomal protein L31 1 79 1.9E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00170 008ece2645d5238365b8e2db5173828a 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 PIRSF PIRSF002825 2 329 5.9E-79 T 14-10-2018 IPR026045 Ferric binding protein BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 Gene3D G3DSA:3.40.190.10 133 311 1.6E-78 T 14-10-2018 BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 Gene3D G3DSA:3.40.190.10 30 297 1.6E-78 T 14-10-2018 BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 4.5E-159 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 SUPERFAMILY SSF53850 27 326 4.53E-63 T 14-10-2018 BJD94_20190 dae6d5899cabeb17e0fe5db246c96b88 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 291 2.2E-26 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.40.10 62 166 4.4E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF103647 1421 1487 6.93E-5 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 597 734 1.5E-15 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 916 1050 1.8E-14 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1591 1676 1.1E-12 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1847 1986 5.8E-18 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 283 420 8.1E-20 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1234 1369 6.7E-17 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 2177 2289 7.0E-14 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 576 764 8.71E-25 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 1532 1708 1.3E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 1539 1723 2.6E-20 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 584 772 2.1E-28 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 1230 1416 3.0E-20 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 1847 2025 1.3E-24 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 280 457 1.3E-24 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 2161 2330 1.6E-19 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 Gene3D G3DSA:2.60.120.200 908 1097 2.0E-21 T 14-10-2018 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 905 1072 3.7E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 ProSitePatterns PS00018 EF-hand calcium-binding domain. 2085 2097 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF103647 469 538 5.89E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 1842 2016 5.9E-21 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 1063 1372 3.45E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 2164 2319 5.78E-23 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF49899 271 450 8.63E-24 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1731 1743 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD94_06450 46733ad7d01199bbd63a90b0b8a6c34f 2343 SUPERFAMILY SSF103647 784 851 7.32E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_15060 e3744dc438738372ded469cba238a28b 617 Pfam PF01435 Peptidase family M48 104 329 1.0E-26 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD94_15060 e3744dc438738372ded469cba238a28b 617 Gene3D G3DSA:3.30.2010.10 94 188 9.8E-32 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF55424 344 463 1.89E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 158 276 1.4E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF51905 5 319 2.35E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PIRSF PIRSF000350 1 463 5.4E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.3E-52 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.4E-28 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.4E-28 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.4E-28 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-28 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.4E-28 T 14-10-2018 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.1E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.5E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.336 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 BJD94_11760 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 7 333 1.4E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_17335 1b965d0923f786a95e64f93081c6808a 336 Pfam PF16868 NMT1-like family 32 326 1.2E-109 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family BJD94_17335 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 32 326 1.3E-89 T 14-10-2018 BJD94_17335 1b965d0923f786a95e64f93081c6808a 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 326 3.4E-102 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family BJD94_17335 1b965d0923f786a95e64f93081c6808a 336 SUPERFAMILY SSF53850 29 327 5.26E-63 T 14-10-2018 BJD94_17335 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 120 263 1.3E-89 T 14-10-2018 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 SMART SM01382 124 252 1.7E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 5.3E-130 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 SUPERFAMILY SSF50249 2 125 2.64E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.889 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 PIRSF PIRSF002158 13 274 1.0E-100 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 SMART SM01383 42 118 1.0E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.1E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:4.10.950.10 196 274 5.8E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:2.40.50.140 1 114 5.1E-50 T 14-10-2018 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 Gene3D G3DSA:2.30.30.30 115 195 1.1E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09865 bd3ad6b1483c2618e66f682baeac1342 274 SUPERFAMILY SSF50104 127 272 4.03E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 SUPERFAMILY SSF160467 7 95 1.31E-10 T 14-10-2018 BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 Gene3D G3DSA:2.40.100.10 91 226 5.8E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 202 7.4E-56 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 SMART SM00796 6 204 4.3E-60 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 Gene3D G3DSA:3.30.1360.40 6 83 1.5E-8 T 14-10-2018 BJD94_21490 301da7f7483e9e875feb9b0e2b6a782e 227 SUPERFAMILY SSF50891 92 220 2.35E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_16650 488281d77a98edb01b1df83477074e21 295 SUPERFAMILY SSF47336 213 290 1.03E-8 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_16650 488281d77a98edb01b1df83477074e21 295 SUPERFAMILY SSF52499 1 209 7.85E-60 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 184 201 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 63 80 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 110 132 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 166 184 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 80 99 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 PRINTS PR01398 Isochorismatase signature 2 14 1.9E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 Gene3D G3DSA:1.10.1200.10 212 286 4.9E-19 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_16650 488281d77a98edb01b1df83477074e21 295 PIRSF PIRSF001111 1 290 1.1E-125 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 BJD94_16650 488281d77a98edb01b1df83477074e21 295 Pfam PF00857 Isochorismatase family 32 193 2.2E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 BJD94_16650 488281d77a98edb01b1df83477074e21 295 Gene3D G3DSA:3.40.50.850 1 209 1.0E-72 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_16650 488281d77a98edb01b1df83477074e21 295 Pfam PF00550 Phosphopantetheine attachment site 217 277 2.1E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_18500 980515872ab19c807a3da0b78cca80c0 293 SUPERFAMILY SSF161098 25 293 1.06E-61 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18500 980515872ab19c807a3da0b78cca80c0 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 276 3.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_18500 980515872ab19c807a3da0b78cca80c0 293 Gene3D G3DSA:1.10.3720.10 21 284 1.0E-56 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 SUPERFAMILY SSF51735 1 180 8.29E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PIRSF PIRSF000149 1 333 3.5E-113 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 3.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.8E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 Gene3D G3DSA:3.30.360.10 151 315 1.2E-124 T 14-10-2018 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 SUPERFAMILY SSF55347 152 314 8.04E-63 T 14-10-2018 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.4E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 Gene3D G3DSA:3.40.50.720 4 327 1.2E-124 T 14-10-2018 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 5.8E-119 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.4E-58 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_11645 9b4b3af7101a8be97c370ead580c4acd 333 SMART SM00846 3 152 1.4E-67 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_18695 b60d1c00a034eef99514c2feefc4d2b0 244 SUPERFAMILY SSF75217 97 243 1.05E-33 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_18695 b60d1c00a034eef99514c2feefc4d2b0 244 SUPERFAMILY SSF55315 4 92 5.41E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BJD94_18695 b60d1c00a034eef99514c2feefc4d2b0 244 Gene3D G3DSA:3.40.1280.10 96 244 3.7E-40 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_18695 b60d1c00a034eef99514c2feefc4d2b0 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 4.6E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD94_18695 b60d1c00a034eef99514c2feefc4d2b0 244 Gene3D G3DSA:3.30.1330.30 1 93 1.7E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 438 1.7E-45 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Pfam PF00571 CBS domain 222 274 1.1E-9 T 14-10-2018 IPR000644 CBS domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Pfam PF00571 CBS domain 153 210 1.6E-7 T 14-10-2018 IPR000644 CBS domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 1.2E-46 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Gene3D G3DSA:3.10.580.10 143 278 8.9E-32 T 14-10-2018 BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 SMART SM00116 159 212 0.17 T 14-10-2018 IPR000644 CBS domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 SMART SM00116 229 276 7.6E-8 T 14-10-2018 IPR000644 CBS domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Gene3D G3DSA:2.60.120.10 1 136 2.0E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 SUPERFAMILY SSF54631 146 275 4.55E-27 T 14-10-2018 BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.7E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 SMART SM00100 17 134 7.8E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_01935 29f97d0e0184a0ed5c3cb0c24cccf66d 625 SUPERFAMILY SSF51206 5 135 7.07E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Gene3D G3DSA:1.10.287.90 25 119 1.3E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 SUPERFAMILY SSF81464 25 117 3.11E-27 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 1.5E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 SUPERFAMILY SSF46626 265 371 1.22E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 1.9E-60 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Gene3D G3DSA:1.10.760.10 263 384 1.9E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 108 7.0E-15 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 2.6E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 Gene3D G3DSA:2.60.40.420 120 259 1.6E-53 T 14-10-2018 IPR008972 Cupredoxin BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 5.9E-40 T 14-10-2018 BJD94_15765 5d4dbbfa6f393b965df8eae8081afe2f 386 SUPERFAMILY SSF49503 115 315 1.49E-52 T 14-10-2018 IPR008972 Cupredoxin BJD94_13925 cc666c60f9d932bd816b6eb2013c9b0d 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.8E-45 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD94_12560 1c0636c55914d38e89601a52d017efba 75 Gene3D G3DSA:1.20.5.300 3 53 3.1E-7 T 14-10-2018 BJD94_12560 1c0636c55914d38e89601a52d017efba 75 Pfam PF04102 SlyX 9 75 9.9E-25 T 14-10-2018 IPR007236 SlyX BJD94_12560 1c0636c55914d38e89601a52d017efba 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.621 T 14-10-2018 IPR007236 SlyX BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 Gene3D G3DSA:2.40.10.10 22 284 1.2E-47 T 14-10-2018 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 SUPERFAMILY SSF50494 14 287 3.28E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 6.5E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 6.5E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 227 239 6.5E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 Pfam PF00089 Trypsin 57 280 1.6E-32 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 228 239 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BJD94_21145 210502763e15e88c35c8ee8c01481c0b 364 SMART SM00020 29 280 1.8E-31 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 PIRSF PIRSF000089 4 321 1.4E-113 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 SUPERFAMILY SSF52402 7 176 9.07E-46 T 14-10-2018 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 2.6E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 SUPERFAMILY SSF52467 199 320 1.54E-50 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 Gene3D G3DSA:3.40.50.1220 196 321 8.2E-59 T 14-10-2018 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 Pfam PF01012 Electron transfer flavoprotein domain 8 181 9.9E-44 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 Gene3D G3DSA:3.40.50.620 7 194 9.2E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_15325 5db459156d5fd9a9e0149ba9d3c6fda1 321 SMART SM00893 8 186 2.4E-34 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD94_13265 8506dfee58d85bbc13565c2f8f429eea 360 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 1 340 1.5E-113 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 BJD94_13265 8506dfee58d85bbc13565c2f8f429eea 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 338 1.4E-65 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BJD94_09390 63cf1dc75b038c69338144512db4fee2 776 Gene3D G3DSA:2.60.450.10 45 97 6.3E-7 T 14-10-2018 BJD94_09390 63cf1dc75b038c69338144512db4fee2 776 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 748 19.762 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 BJD94_09390 63cf1dc75b038c69338144512db4fee2 776 Pfam PF03968 OstA-like protein 56 187 6.3E-21 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BJD94_09390 63cf1dc75b038c69338144512db4fee2 776 Pfam PF04453 Organic solvent tolerance protein 295 677 1.7E-110 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 SUPERFAMILY SSF51556 39 397 9.18E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 Gene3D G3DSA:2.30.40.10 3 410 8.8E-167 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 Pfam PF07969 Amidohydrolase family 28 438 1.4E-42 T 14-10-2018 IPR013108 Amidohydrolase 3 BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 Gene3D G3DSA:3.30.1490.130 266 322 8.8E-167 T 14-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 SUPERFAMILY SSF51338 4 451 7.53E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_15890 ba27737cd8abcd74ac93f328c2c3f5a4 460 Gene3D G3DSA:3.20.20.140 38 397 8.8E-167 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.40.50.261 132 291 8.3E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.30.470.20 491 700 7.4E-55 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SUPERFAMILY SSF55729 732 876 6.69E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SUPERFAMILY SSF52210 131 290 6.28E-35 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Pfam PF13380 CoA binding domain 12 136 3.9E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SUPERFAMILY SSF56059 491 698 2.36E-30 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.40.50.261 293 463 1.7E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Pfam PF00583 Acetyltransferase (GNAT) family 771 873 3.8E-10 T 14-10-2018 IPR000182 GNAT domain BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.40.50.720 1 131 2.4E-32 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Pfam PF13549 ATP-grasp domain 485 704 9.4E-66 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SUPERFAMILY SSF51735 3 141 1.18E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.30.1490.20 509 586 7.4E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 288 2.5E-44 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SUPERFAMILY SSF52210 295 455 1.44E-39 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 Gene3D G3DSA:3.40.630.30 727 892 8.1E-41 T 14-10-2018 BJD94_21520 b9a3487635e97749bd5ae354303c273f 892 SMART SM00881 7 102 2.3E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 Gene3D G3DSA:1.10.287.470 90 149 2.5E-77 T 14-10-2018 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 Gene3D G3DSA:2.40.30.170 41 267 2.5E-77 T 14-10-2018 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 3.4E-87 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 SUPERFAMILY SSF111369 47 263 2.35E-31 T 14-10-2018 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 Gene3D G3DSA:2.40.50.100 56 188 2.5E-77 T 14-10-2018 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 Gene3D G3DSA:2.40.420.20 35 334 2.5E-77 T 14-10-2018 BJD94_05175 bac62ab8f218598d2555fb7e7ecb8a3a 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 245 9.4E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_07640 1bb1d109141c386faaee9506de149908 264 Pfam PF03330 Lytic transglycolase 81 170 5.3E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BJD94_07640 1bb1d109141c386faaee9506de149908 264 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 251 1.7E-46 T 14-10-2018 IPR012997 Rare lipoprotein A BJD94_07640 1bb1d109141c386faaee9506de149908 264 SUPERFAMILY SSF110997 186 258 9.81E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_07640 1bb1d109141c386faaee9506de149908 264 Gene3D G3DSA:2.40.40.10 80 174 6.0E-39 T 14-10-2018 IPR036908 RlpA-like domain superfamily BJD94_07640 1bb1d109141c386faaee9506de149908 264 Pfam PF05036 Sporulation related domain 187 258 3.6E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_07640 1bb1d109141c386faaee9506de149908 264 SUPERFAMILY SSF50685 82 171 1.01E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily BJD94_07640 1bb1d109141c386faaee9506de149908 264 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 21 173 25.138 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.30.70.580 70 228 9.9E-49 T 14-10-2018 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.10.290.10 1 60 1.1E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.30.70.1560 130 220 9.9E-49 T 14-10-2018 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 SUPERFAMILY SSF55120 68 235 2.26E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 Pfam PF00849 RNA pseudouridylate synthase 68 200 4.1E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 2.7E-54 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 SMART SM00363 3 73 5.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 SUPERFAMILY SSF55174 4 96 8.92E-12 T 14-10-2018 BJD94_05965 67c4b37fe7c28d68bc66405d103abaff 320 Pfam PF01479 S4 domain 4 44 1.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_10405 62cc723facbe1b5a4497907911215e6b 255 Pfam PF00561 alpha/beta hydrolase fold 16 242 5.5E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_10405 62cc723facbe1b5a4497907911215e6b 255 Gene3D G3DSA:3.40.50.1820 1 253 2.1E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_10405 62cc723facbe1b5a4497907911215e6b 255 SUPERFAMILY SSF53474 4 252 1.49E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_10405 62cc723facbe1b5a4497907911215e6b 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 47.138 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BJD94_10405 62cc723facbe1b5a4497907911215e6b 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 7.0E-109 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 Gene3D G3DSA:3.40.570.10 11 242 1.1E-73 T 14-10-2018 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 98 106 - T 14-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 Pfam PF01223 DNA/RNA non-specific endonuclease 22 229 4.5E-57 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 SUPERFAMILY SSF54060 21 239 5.18E-70 T 14-10-2018 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 SMART SM00892 38 230 2.8E-64 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD94_07770 9e71cc4d66969d218a5af0b1fd8fc3d8 247 SMART SM00477 39 230 3.5E-64 T 14-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 BJD94_06550 07bc1a2259f120cbc7f42dc7e76ca198 263 Pfam PF12697 Alpha/beta hydrolase family 20 251 1.2E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_06550 07bc1a2259f120cbc7f42dc7e76ca198 263 SUPERFAMILY SSF53474 3 259 9.59E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_06550 07bc1a2259f120cbc7f42dc7e76ca198 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 8 258 34.775 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BJD94_06550 07bc1a2259f120cbc7f42dc7e76ca198 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 17 258 4.6E-86 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BJD94_06550 07bc1a2259f120cbc7f42dc7e76ca198 263 Gene3D G3DSA:3.40.50.1820 4 261 1.5E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 Gene3D G3DSA:3.40.190.290 95 294 8.7E-64 T 14-10-2018 BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 Pfam PF03466 LysR substrate binding domain 92 292 1.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 Gene3D G3DSA:1.10.10.10 5 92 2.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 SUPERFAMILY SSF53850 93 298 2.99E-41 T 14-10-2018 BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 SUPERFAMILY SSF46785 6 85 2.54E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19095 edeed2df60a023bdf9b375ee486ac844 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Pfam PF00005 ABC transporter 304 455 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Gene3D G3DSA:3.40.50.300 4 281 8.2E-82 T 14-10-2018 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 SUPERFAMILY SSF52540 294 526 1.04E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 SMART SM00382 312 504 4.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 SMART SM00382 35 235 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Gene3D G3DSA:3.40.50.300 282 535 1.3E-68 T 14-10-2018 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Pfam PF00005 ABC transporter 26 185 9.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 SUPERFAMILY SSF52540 6 256 2.27E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 536 0.0034 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_16430 51f19a8f5f587c3396f5ea67dd27aa7b 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 267 1.4E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Pfam PF08453 Peptidase family M9 N-terminal 34 214 6.9E-54 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 100 118 2.7E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 436 454 2.7E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 376 390 2.7E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 394 410 2.7E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 460 475 2.7E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Pfam PF01752 Collagenase 276 560 1.3E-111 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 604 675 3.3E-9 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Gene3D G3DSA:1.10.1740.190 305 452 4.4E-32 T 14-10-2018 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Gene3D G3DSA:2.60.120.380 708 809 3.1E-6 T 14-10-2018 BJD94_17860 ebbd99a7966750f49fa6a621f9160120 810 Gene3D G3DSA:2.60.120.380 586 688 2.1E-12 T 14-10-2018 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.729 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 SUPERFAMILY SSF52540 1 640 1.62E-162 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Gene3D G3DSA:1.10.486.10 377 546 1.1E-124 T 14-10-2018 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 5.7E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Gene3D G3DSA:1.10.10.160 108 181 6.0E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Gene3D G3DSA:3.40.50.300 274 634 1.1E-124 T 14-10-2018 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BJD94_11345 be7f41b65198777c1a04d7989ad737d2 672 Gene3D G3DSA:3.40.50.300 4 266 6.0E-99 T 14-10-2018 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 Gene3D G3DSA:1.10.3880.10 1 90 2.1E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 SUPERFAMILY SSF111148 1 89 7.98E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.501 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD94_13435 0fc62c55139b9efeae00918bf75a3b08 90 PIRSF PIRSF029827 1 90 1.9E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD94_17155 dfd6acd58ceed1a1adac5b33689505e0 116 Hamap MF_00674 UPF0251 protein . 18 114 25.571 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 BJD94_17155 dfd6acd58ceed1a1adac5b33689505e0 116 Pfam PF02001 Protein of unknown function DUF134 19 104 6.5E-20 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 BJD94_17155 dfd6acd58ceed1a1adac5b33689505e0 116 Gene3D G3DSA:1.10.10.10 48 99 2.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 SUPERFAMILY SSF46955 2 103 3.0E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 SMART SM00422 2 71 1.7E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.6E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03180 bfa13f632709c67e3d384a0e559e05af 169 Gene3D G3DSA:1.10.1660.10 1 138 2.9E-25 T 14-10-2018 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 SUPERFAMILY SSF46955 2 103 3.0E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 SMART SM00422 2 71 1.7E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.6E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_03450 bfa13f632709c67e3d384a0e559e05af 169 Gene3D G3DSA:1.10.1660.10 1 138 2.9E-25 T 14-10-2018 BJD94_06425 aa8abe897384cbf76cde90a42e3032b9 141 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 134 4.1E-40 T 14-10-2018 IPR039366 YscW/ExsB BJD94_18170 3f3e453e093e230fbace1546b0ccce96 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 361 6.5E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_18170 3f3e453e093e230fbace1546b0ccce96 398 SMART SM00267 180 362 5.8E-48 T 14-10-2018 IPR000160 GGDEF domain BJD94_18170 3f3e453e093e230fbace1546b0ccce96 398 Gene3D G3DSA:3.30.70.270 186 373 6.7E-48 T 14-10-2018 BJD94_18170 3f3e453e093e230fbace1546b0ccce96 398 SUPERFAMILY SSF55073 196 363 7.46E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_18170 3f3e453e093e230fbace1546b0ccce96 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 3.4E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_01560 e8f983a3c0df4469d041dca22d49a2d9 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 6.3E-157 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BJD94_01560 e8f983a3c0df4469d041dca22d49a2d9 387 SUPERFAMILY SSF52440 174 280 2.53E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_01560 e8f983a3c0df4469d041dca22d49a2d9 387 SUPERFAMILY SSF56059 2 385 1.08E-86 T 14-10-2018 BJD94_01560 e8f983a3c0df4469d041dca22d49a2d9 387 Gene3D G3DSA:3.30.1490.330 264 345 5.4E-23 T 14-10-2018 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 Pfam PF13432 Tetratricopeptide repeat 34 75 0.0045 T 14-10-2018 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 Gene3D G3DSA:1.25.40.10 96 246 2.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 Gene3D G3DSA:1.25.40.10 18 95 3.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 SUPERFAMILY SSF48452 27 193 1.31E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 Pfam PF13181 Tetratricopeptide repeat 97 130 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 SMART SM00028 131 164 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 SMART SM00028 28 61 0.42 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_02365 eeef275446bed0016cd0caf50d42748d 246 SMART SM00028 97 130 3.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_15195 2ad76c7a787ea72e284c7ac031cb83be 374 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 1 369 1.2E-117 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein BJD94_15195 2ad76c7a787ea72e284c7ac031cb83be 374 SMART SM00240 1 51 1.4E-6 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD94_15195 2ad76c7a787ea72e284c7ac031cb83be 374 SUPERFAMILY SSF49879 2 79 4.4E-19 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BJD94_15195 2ad76c7a787ea72e284c7ac031cb83be 374 Pfam PF00498 FHA domain 2 70 1.9E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD94_15195 2ad76c7a787ea72e284c7ac031cb83be 374 Gene3D G3DSA:2.60.200.20 1 94 2.3E-18 T 14-10-2018 BJD94_11530 c12df03a7dc41c5e38940fe5b1698632 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.3E-49 T 14-10-2018 IPR019598 Universal stress protein B BJD94_11530 c12df03a7dc41c5e38940fe5b1698632 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.994 T 14-10-2018 IPR019598 Universal stress protein B BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 Gene3D G3DSA:3.40.1160.10 23 307 8.2E-101 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 Gene3D G3DSA:3.30.70.260 321 462 1.2E-46 T 14-10-2018 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 Pfam PF00696 Amino acid kinase family 22 295 6.6E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 PIRSF PIRSF000726 19 466 1.6E-129 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 21 465 1.3E-123 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 Gene3D G3DSA:3.30.70.260 327 400 1.2E-46 T 14-10-2018 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 ProSitePatterns PS00324 Aspartokinase signature. 23 31 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 SUPERFAMILY SSF55021 394 465 8.59E-13 T 14-10-2018 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 SUPERFAMILY SSF53633 22 310 1.44E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 Gene3D G3DSA:1.20.120.1320 59 152 8.2E-101 T 14-10-2018 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 21 465 5.1E-124 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13015 c7d4c26e976be1c95dbf93a4d1e4a5c7 466 SUPERFAMILY SSF55021 314 411 3.88E-19 T 14-10-2018 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Gene3D G3DSA:2.40.50.140 631 725 4.7E-29 T 14-10-2018 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SUPERFAMILY SSF47781 470 557 1.33E-27 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Pfam PF00575 S1 RNA binding domain 648 720 2.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Gene3D G3DSA:1.10.3500.10 112 498 3.2E-159 T 14-10-2018 IPR023323 Tex-like domain superfamily BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Gene3D G3DSA:1.10.150.310 499 630 7.3E-50 T 14-10-2018 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Gene3D G3DSA:1.10.10.650 2 109 2.8E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SUPERFAMILY SSF53098 322 469 1.14E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-28 T 14-10-2018 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SMART SM00732 326 424 1.3E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SUPERFAMILY SSF158832 3 321 1.18E-120 T 14-10-2018 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Pfam PF09371 Tex-like protein N-terminal domain 9 193 2.3E-71 T 14-10-2018 IPR018974 Tex-like protein, N-terminal BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Gene3D G3DSA:3.30.420.140 325 451 3.2E-159 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SUPERFAMILY SSF47781 560 632 1.16E-18 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SMART SM00316 649 720 3.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 Pfam PF16921 Tex protein YqgF-like domain 327 451 1.4E-55 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain BJD94_10395 99416c029a889fbed4e01e99d2238c75 774 SUPERFAMILY SSF50249 638 723 1.19E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 37.285 T 14-10-2018 IPR007376 dsDNA mimic, putative BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 3.0E-44 T 14-10-2018 IPR007376 dsDNA mimic, putative BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 Gene3D G3DSA:3.10.450.140 5 105 2.7E-40 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 4.8E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 SUPERFAMILY SSF102816 3 105 7.06E-48 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily BJD94_05960 0f3193ce2f8aa794f2624d5b459d46db 106 PIRSF PIRSF004916 1 105 5.4E-51 T 14-10-2018 IPR007376 dsDNA mimic, putative BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 353 366 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 134 146 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 206 233 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 40 56 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 263 278 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 280 295 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 74 92 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 169 180 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 PRINTS PR00992 Alanine racemase signature 301 318 3.0E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 Gene3D G3DSA:3.20.20.10 24 231 6.7E-133 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 Hamap MF_01201 Alanine racemase. 15 371 35.433 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 SUPERFAMILY SSF50621 241 370 9.42E-48 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 TIGRFAM TIGR00492 alr: alanine racemase 17 370 5.7E-129 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 Gene3D G3DSA:2.40.37.10 22 366 6.7E-133 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 45 55 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 Pfam PF01168 Alanine racemase, N-terminal domain 22 233 1.4E-69 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 Pfam PF00842 Alanine racemase, C-terminal domain 247 370 3.8E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 SUPERFAMILY SSF51419 22 248 2.49E-70 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_12860 81b6fab57a87b0b19eb3c5814223301f 372 SMART SM01005 247 371 6.9E-70 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 PIRSF PIRSF001461 1 222 1.7E-106 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 SUPERFAMILY SSF51366 4 218 3.03E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.1E-100 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 Gene3D G3DSA:3.20.20.70 5 222 6.6E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.9E-92 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD94_12825 a41e25feb69070d9654c6353db19d5c0 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 Pfam PF01022 Bacterial regulatory protein, arsR family 28 73 6.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 SUPERFAMILY SSF46785 13 102 2.21E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 Gene3D G3DSA:1.10.10.10 8 103 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 4.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 4.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 4.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_21690 bde614b9477a2a45f2ad3af1a90c9170 103 SMART SM00418 21 99 9.6E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:1.20.1060.10 545 660 1.7E-42 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SMART SM00475 7 267 6.1E-121 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SMART SM00474 332 519 9.8E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:3.30.420.10 329 544 1.4E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SUPERFAMILY SSF88723 7 170 1.3E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:3.30.70.370 666 927 8.4E-113 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 9.6E-55 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Pfam PF01612 3'-5' exonuclease 332 516 2.5E-38 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SUPERFAMILY SSF47807 171 291 4.04E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 7.5E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:1.10.150.20 711 854 8.4E-113 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.2E-287 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SUPERFAMILY SSF56672 526 931 4.56E-158 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SMART SM00482 688 895 4.9E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:3.40.50.1010 9 284 2.5E-94 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Pfam PF00476 DNA polymerase family A 553 928 2.3E-156 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 Gene3D G3DSA:1.10.150.20 174 253 2.5E-94 T 14-10-2018 BJD94_10595 1c63b97975d2436fa899ebaf95768c0e 931 SUPERFAMILY SSF53098 335 520 5.24E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_19930 654e7649d0c7e09723be13bea4308787 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 163 239 1.6E-21 T 14-10-2018 IPR006260 TonB/TolA, C-terminal BJD94_19930 654e7649d0c7e09723be13bea4308787 240 Gene3D G3DSA:3.30.1150.10 138 240 2.4E-23 T 14-10-2018 BJD94_19930 654e7649d0c7e09723be13bea4308787 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 239 1.3E-23 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD94_19930 654e7649d0c7e09723be13bea4308787 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 178 6.3E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_19930 654e7649d0c7e09723be13bea4308787 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 196 6.3E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_19930 654e7649d0c7e09723be13bea4308787 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 72 82 6.3E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_19930 654e7649d0c7e09723be13bea4308787 240 SUPERFAMILY SSF74653 160 237 5.49E-23 T 14-10-2018 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 SUPERFAMILY SSF47446 329 430 1.08E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Gene3D G3DSA:3.40.50.300 90 285 5.8E-122 T 14-10-2018 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 SMART SM00962 100 296 9.5E-114 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.221 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 SMART SM00382 99 247 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 9.5E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 SMART SM00963 1 86 1.1E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Gene3D G3DSA:1.20.120.140 4 305 5.8E-122 T 14-10-2018 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Gene3D G3DSA:1.10.260.30 328 452 3.5E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.9E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 SUPERFAMILY SSF52540 42 353 2.92E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.9E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_13930 9c6a3357346eeaced98ed5093967f213 458 Pfam PF02978 Signal peptide binding domain 329 427 3.5E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD94_05870 c071ddbeafc1074693c91c668c0ac11d 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 1.2E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_05870 c071ddbeafc1074693c91c668c0ac11d 92 Gene3D G3DSA:3.10.20.30 2 90 5.0E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_05870 c071ddbeafc1074693c91c668c0ac11d 92 SUPERFAMILY SSF54292 4 85 7.6E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_05870 c071ddbeafc1074693c91c668c0ac11d 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.6E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.837 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 Pfam PF00406 Adenylate kinase 5 185 1.7E-59 T 14-10-2018 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 Gene3D G3DSA:3.40.50.300 1 214 6.0E-78 T 14-10-2018 BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 SUPERFAMILY SSF52540 1 202 5.33E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07110 65f2b618f20d9668bdd1ef293b1dcae9 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 9.0E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 157 9.0E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 9.0E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 SUPERFAMILY SSF54523 8 149 4.16E-15 T 14-10-2018 BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 7.8E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_20050 b4fc89f4bcf5ea865d6646abfe51b93d 157 Gene3D G3DSA:3.30.700.10 8 152 1.4E-11 T 14-10-2018 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF50447 579 661 3.12E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.40.50.10050 701 807 5.5E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 331 381 4.0E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF50447 808 904 2.55E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 410 565 8.8E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:2.40.30.10 808 905 5.5E-34 T 14-10-2018 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.30.56.50 2 50 4.1E-24 T 14-10-2018 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 324 906 1.1E-285 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Pfam PF00009 Elongation factor Tu GTP binding domain 410 567 7.5E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Pfam PF11987 Translation-initiation factor 2 691 796 9.7E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:3.40.50.300 403 577 9.3E-71 T 14-10-2018 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF52156 684 813 1.83E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 904 17.696 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF52540 400 573 4.29E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-15 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 SUPERFAMILY SSF46955 3 50 1.43E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_14325 78475a5b222d5da41b37779ff21c5090 907 Gene3D G3DSA:2.40.30.10 578 696 1.5E-40 T 14-10-2018 BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 SUPERFAMILY SSF46785 4 112 4.49E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 Gene3D G3DSA:3.40.190.10 164 260 3.4E-57 T 14-10-2018 BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 Gene3D G3DSA:3.40.190.10 92 287 3.4E-57 T 14-10-2018 BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 Gene3D G3DSA:1.10.10.10 3 89 2.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 Pfam PF03466 LysR substrate binding domain 90 290 7.7E-36 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_20940 6b0f0dda04e0d10d80456fc4e73e70a1 293 SUPERFAMILY SSF53850 91 291 5.58E-35 T 14-10-2018 BJD94_07125 8371438f270bdf08aa98957f31b57d5d 172 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 172 3.0E-85 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 BJD94_07125 8371438f270bdf08aa98957f31b57d5d 172 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 170 1.4E-70 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 SUPERFAMILY SSF51182 3 389 1.88E-101 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 Pfam PF01238 Phosphomannose isomerase type I 4 365 1.7E-81 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 Gene3D G3DSA:2.60.120.10 313 394 2.5E-126 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PIRSF PIRSF001480 1 401 8.2E-101 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 Gene3D G3DSA:2.60.120.10 8 287 2.5E-126 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 Gene3D G3DSA:1.10.441.10 151 312 2.5E-126 T 14-10-2018 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 6.6E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 393 1.3E-85 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_09940 712b3a40c0f9331a0f26b1e6fd063f60 401 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 267 292 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 2.4E-13 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 Gene3D G3DSA:1.10.357.10 63 204 4.9E-27 T 14-10-2018 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 SUPERFAMILY SSF46689 4 73 3.24E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15925 e06dff0071e3f3da6759cd1732dafee1 209 Gene3D G3DSA:1.10.10.60 4 61 3.6E-21 T 14-10-2018 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.3380 368 478 6.5E-39 T 14-10-2018 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 SMART SM00838 398 486 0.0072 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF54980 399 493 1.97E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.8E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF54980 292 370 2.09E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF52540 2 205 1.86E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.2570 479 553 5.3E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.2E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 6.0E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:2.40.30.10 186 285 3.7E-34 T 14-10-2018 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.867 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF50447 165 288 3.31E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF00679 Elongation factor G C-terminus 399 483 6.9E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.3E-299 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.40.50.300 1 185 7.5E-71 T 14-10-2018 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.7E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_13680 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.870 286 367 2.3E-35 T 14-10-2018 BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 5.2E-11 T 14-10-2018 BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 SUPERFAMILY SSF52833 38 130 4.19E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 SUPERFAMILY SSF47616 132 278 1.27E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 Gene3D G3DSA:1.20.1050.10 132 248 1.5E-112 T 14-10-2018 BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 1.3E-6 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_18405 1360b173d478c188bd60ef558ece1ee0 285 Gene3D G3DSA:3.40.30.10 17 254 1.5E-112 T 14-10-2018 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 Gene3D G3DSA:1.10.1130.10 33 462 5.8E-186 T 14-10-2018 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 29 466 8.2E-247 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 PIRSF PIRSF000243 3 468 5.9E-127 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 468 58.082 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 SUPERFAMILY SSF48695 30 463 3.18E-161 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 Pfam PF02335 Cytochrome c552 34 463 1.3E-178 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 BJD94_05830 bce7c4c9e39ddd609104ac2c8d2e33e4 468 Gene3D G3DSA:1.20.140.10 302 444 5.8E-186 T 14-10-2018 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 Gene3D G3DSA:3.40.50.620 3 279 2.2E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 266 1.6E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 285 41.012 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 SUPERFAMILY SSF52374 3 280 1.45E-85 T 14-10-2018 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 Gene3D G3DSA:3.40.50.620 78 213 2.2E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 232 1.4E-41 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 165 175 8.4E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.4E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 189 8.4E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.4E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_14070 ec17a1c2a6337cea9b7d60d3740b89e2 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.4E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_10180 93555d330b4537d0ede36640928524c0 353 SUPERFAMILY SSF53756 10 343 4.71E-84 T 14-10-2018 BJD94_10180 93555d330b4537d0ede36640928524c0 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 303 1.2E-59 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BJD94_10180 93555d330b4537d0ede36640928524c0 353 Gene3D G3DSA:3.40.50.2000 4 156 1.1E-24 T 14-10-2018 BJD94_10180 93555d330b4537d0ede36640928524c0 353 Gene3D G3DSA:3.40.50.2000 161 347 9.0E-42 T 14-10-2018 BJD94_02720 74b5554d3fa8a783e7677da56089a5b5 73 Gene3D G3DSA:1.10.720.30 14 72 2.8E-30 T 14-10-2018 IPR036361 SAP domain superfamily BJD94_02720 74b5554d3fa8a783e7677da56089a5b5 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 BJD94_03830 9f94609740ec42c6336cf612587b3466 272 SUPERFAMILY SSF53850 29 257 2.42E-29 T 14-10-2018 BJD94_03830 9f94609740ec42c6336cf612587b3466 272 Gene3D G3DSA:3.40.190.10 31 255 3.5E-97 T 14-10-2018 BJD94_03830 9f94609740ec42c6336cf612587b3466 272 Gene3D G3DSA:3.40.190.10 106 218 3.5E-97 T 14-10-2018 BJD94_03830 9f94609740ec42c6336cf612587b3466 272 Pfam PF12849 PBP superfamily domain 31 247 2.0E-28 T 14-10-2018 IPR024370 PBP domain BJD94_07455 762d141acd44bb502cf95090687b824e 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_07455 762d141acd44bb502cf95090687b824e 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 44.804 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BJD94_07455 762d141acd44bb502cf95090687b824e 291 SUPERFAMILY SSF53335 9 279 5.43E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_07455 762d141acd44bb502cf95090687b824e 291 Gene3D G3DSA:1.10.8.10 5 90 1.5E-26 T 14-10-2018 BJD94_07455 762d141acd44bb502cf95090687b824e 291 Pfam PF13847 Methyltransferase domain 116 247 2.3E-16 T 14-10-2018 IPR025714 Methyltransferase domain BJD94_07455 762d141acd44bb502cf95090687b824e 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 3.5E-93 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BJD94_07455 762d141acd44bb502cf95090687b824e 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 281 3.8E-81 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BJD94_07455 762d141acd44bb502cf95090687b824e 291 Gene3D G3DSA:3.40.50.150 91 282 2.3E-59 T 14-10-2018 BJD94_01525 5264587921ae8920b911850729271bf2 443 Pfam PF07676 WD40-like Beta Propeller Repeat 293 329 2.7E-13 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_01525 5264587921ae8920b911850729271bf2 443 Pfam PF07676 WD40-like Beta Propeller Repeat 215 241 4.6E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_01525 5264587921ae8920b911850729271bf2 443 Pfam PF07676 WD40-like Beta Propeller Repeat 250 285 1.7E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller BJD94_01525 5264587921ae8920b911850729271bf2 443 SUPERFAMILY SSF52964 23 174 2.22E-41 T 14-10-2018 BJD94_01525 5264587921ae8920b911850729271bf2 443 Gene3D G3DSA:3.40.50.10070 17 176 5.9E-49 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 BJD94_01525 5264587921ae8920b911850729271bf2 443 Gene3D G3DSA:2.120.10.30 178 443 2.0E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD94_01525 5264587921ae8920b911850729271bf2 443 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 439 51.678 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BJD94_01525 5264587921ae8920b911850729271bf2 443 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 10 440 8.9E-168 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BJD94_01525 5264587921ae8920b911850729271bf2 443 SUPERFAMILY SSF69304 169 441 1.83E-57 T 14-10-2018 BJD94_01525 5264587921ae8920b911850729271bf2 443 Pfam PF04052 TolB amino-terminal domain 19 120 5.7E-35 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 SMART SM00954 250 360 4.7E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 SUPERFAMILY SSF109604 37 205 1.35E-41 T 14-10-2018 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Gene3D G3DSA:1.10.3210.10 42 205 2.2E-34 T 14-10-2018 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Gene3D G3DSA:3.30.460.10 208 340 6.5E-50 T 14-10-2018 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 4.4E-185 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Pfam PF13291 ACT domain 663 739 5.4E-15 T 14-10-2018 IPR002912 ACT domain BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 SUPERFAMILY SSF55021 664 739 4.16E-10 T 14-10-2018 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.3E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 SUPERFAMILY SSF81271 396 462 1.07E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Pfam PF13328 HD domain 52 190 4.3E-35 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 SUPERFAMILY SSF81301 195 407 8.66E-63 T 14-10-2018 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Gene3D G3DSA:3.10.20.30 397 470 6.4E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Pfam PF02824 TGS domain 403 462 1.7E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD94_13740 fcb61656a724627bd42cd0cb7e418da3 741 Gene3D G3DSA:3.30.70.260 662 741 5.9E-16 T 14-10-2018 BJD94_18285 a29ec70af15c60ce5c16ec1bca4d7e52 149 Pfam PF04314 Copper chaperone PCu(A)C 26 132 2.7E-37 T 14-10-2018 IPR007410 Copper chaperone PCuAC BJD94_18285 a29ec70af15c60ce5c16ec1bca4d7e52 149 Gene3D G3DSA:2.60.40.1890 29 144 3.6E-39 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily BJD94_18285 a29ec70af15c60ce5c16ec1bca4d7e52 149 SUPERFAMILY SSF110087 3 141 6.54E-46 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 SUPERFAMILY SSF47384 207 289 8.63E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 SUPERFAMILY SSF55874 279 441 1.51E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 Gene3D G3DSA:1.10.287.130 174 291 3.7E-21 T 14-10-2018 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 442 6.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 Gene3D G3DSA:3.30.565.10 293 442 1.7E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 SMART SM00388 224 290 3.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 1.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 441 8.6E-116 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 SMART SM00387 333 445 2.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17375 54c9a803a004df946dcb25c82cdd7ade 450 SMART SM00304 170 223 3.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21015 dd460e25702724078f9955c06fe1aa53 566 Gene3D G3DSA:3.40.720.10 26 556 5.0E-182 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_21015 dd460e25702724078f9955c06fe1aa53 566 SUPERFAMILY SSF53649 14 545 1.11E-62 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_21015 dd460e25702724078f9955c06fe1aa53 566 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 30 505 1.4E-81 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 BJD94_21015 dd460e25702724078f9955c06fe1aa53 566 PIRSF PIRSF031924 1 566 3.9E-221 T 14-10-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_21015 dd460e25702724078f9955c06fe1aa53 566 Gene3D G3DSA:3.30.1360.150 374 496 5.0E-182 T 14-10-2018 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.9E-4 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 2.8E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 Gene3D G3DSA:3.40.50.970 55 471 8.1E-133 T 14-10-2018 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 Gene3D G3DSA:3.40.50.970 472 705 4.1E-111 T 14-10-2018 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 SUPERFAMILY SSF52518 56 469 6.11E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 Gene3D G3DSA:3.40.50.920 706 886 1.4E-69 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 SUPERFAMILY SSF52922 701 885 1.04E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_14005 f6b42f147ac235aef2531fba94dc06ea 886 PIRSF PIRSF000156 1 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 SUPERFAMILY SSF52374 1 281 2.36E-105 T 14-10-2018 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.8E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 Gene3D G3DSA:3.30.1300.10 181 283 3.7E-27 T 14-10-2018 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.656 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 63 5.2E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.8E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD94_14050 6b7508335cf47ed818ea8ce238eb1b52 301 Gene3D G3DSA:3.40.50.620 1 179 3.5E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_08020 20d724900591747d916d10887e64459b 294 SUPERFAMILY SSF111331 8 290 1.16E-91 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BJD94_08020 20d724900591747d916d10887e64459b 294 Pfam PF01513 ATP-NAD kinase 8 273 5.9E-69 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD94_08020 20d724900591747d916d10887e64459b 294 Gene3D G3DSA:3.40.50.10330 23 289 7.6E-92 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BJD94_08020 20d724900591747d916d10887e64459b 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.885 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD94_08020 20d724900591747d916d10887e64459b 294 Gene3D G3DSA:2.60.200.30 129 266 7.6E-92 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD94_06560 610ba9834051915dbe86553997840b02 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 8 432 31.785 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BJD94_06560 610ba9834051915dbe86553997840b02 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 429 1.2E-100 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BJD94_06560 610ba9834051915dbe86553997840b02 440 SUPERFAMILY SSF56322 29 430 7.98E-103 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_06560 610ba9834051915dbe86553997840b02 440 Pfam PF00425 chorismate binding enzyme 169 422 2.9E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD94_06560 610ba9834051915dbe86553997840b02 440 Gene3D G3DSA:3.60.120.10 4 434 2.4E-127 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_05815 1fff55bcf3a0c3d4d89beb307a1623b8 318 Gene3D G3DSA:1.20.1630.10 7 227 1.1E-14 T 14-10-2018 BJD94_05815 1fff55bcf3a0c3d4d89beb307a1623b8 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 318 2.4E-149 T 14-10-2018 IPR017566 NrfD BJD94_05815 1fff55bcf3a0c3d4d89beb307a1623b8 318 Pfam PF03916 Polysulphide reductase, NrfD 6 317 3.9E-75 T 14-10-2018 IPR005614 NrfD family BJD94_01810 159d1774b491e87c148b87493c8780c1 513 Gene3D G3DSA:3.30.70.270 339 507 6.7E-45 T 14-10-2018 BJD94_01810 159d1774b491e87c148b87493c8780c1 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 501 8.6E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_01810 159d1774b491e87c148b87493c8780c1 513 SMART SM00267 340 506 1.0E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_01810 159d1774b491e87c148b87493c8780c1 513 SUPERFAMILY SSF55073 356 505 2.51E-36 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01810 159d1774b491e87c148b87493c8780c1 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 505 1.5E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_19810 38eed66ed6288d6b2ab36718034151b6 296 Gene3D G3DSA:1.10.3720.10 1 283 8.9E-74 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19810 38eed66ed6288d6b2ab36718034151b6 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 2.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_19810 38eed66ed6288d6b2ab36718034151b6 296 SUPERFAMILY SSF161098 10 296 3.14E-68 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18045 cc278ca0c36ca993ba6d144c1e0d67ea 367 Pfam PF06580 Histidine kinase 170 248 1.9E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BJD94_18045 cc278ca0c36ca993ba6d144c1e0d67ea 367 SMART SM00387 263 360 3.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_18045 cc278ca0c36ca993ba6d144c1e0d67ea 367 Gene3D G3DSA:3.30.565.10 225 358 4.8E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_18045 cc278ca0c36ca993ba6d144c1e0d67ea 367 SUPERFAMILY SSF55874 229 357 2.49E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 Gene3D G3DSA:3.40.1410.10 89 224 4.4E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 SUPERFAMILY SSF64288 95 231 4.71E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 SUPERFAMILY SSF46785 3 72 2.84E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 Gene3D G3DSA:1.10.10.10 2 69 9.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 4.8E-91 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 SMART SM00866 91 228 5.3E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 SMART SM00345 9 68 2.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 Pfam PF07702 UTRA domain 92 228 4.7E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_02620 7fcaa3279b1e543f510883b80ba592f3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14380 f56317cb7701f7485be30f4603e953ae 443 PIRSF PIRSF006603 1 441 4.1E-67 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_14380 f56317cb7701f7485be30f4603e953ae 443 Pfam PF01554 MatE 15 176 3.6E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_14380 f56317cb7701f7485be30f4603e953ae 443 Pfam PF01554 MatE 240 398 2.5E-8 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_14380 f56317cb7701f7485be30f4603e953ae 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.8E-48 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 3.1E-75 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 SUPERFAMILY SSF55194 1 172 2.49E-68 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 Pfam PF01765 Ribosome recycling factor 8 171 3.4E-63 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 Gene3D G3DSA:1.10.132.20 1 170 6.1E-67 T 14-10-2018 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 24.955 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BJD94_00250 78713deda07ffea3bc681d2c4b17998e 173 Gene3D G3DSA:3.30.1360.40 19 93 6.1E-67 T 14-10-2018 BJD94_04710 283c13f217720018693aad711dbb027c 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 2.0E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_04710 283c13f217720018693aad711dbb027c 634 SUPERFAMILY SSF56300 19 327 2.31E-75 T 14-10-2018 BJD94_04710 283c13f217720018693aad711dbb027c 634 Gene3D G3DSA:3.60.21.10 21 325 2.3E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_04710 283c13f217720018693aad711dbb027c 634 SUPERFAMILY SSF55816 339 547 6.8E-25 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 Gene3D G3DSA:3.90.780.10 330 542 1.9E-31 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 8.1E-22 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 PRINTS PR01607 Apyrase family signature 230 253 9.0E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 PRINTS PR01607 Apyrase family signature 257 277 9.0E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 PRINTS PR01607 Apyrase family signature 26 44 9.0E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_04710 283c13f217720018693aad711dbb027c 634 PRINTS PR01607 Apyrase family signature 203 220 9.0E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Pfam PF00072 Response regulator receiver domain 9 118 3.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 SUPERFAMILY SSF52540 148 370 1.6E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 SUPERFAMILY SSF46689 388 443 1.03E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 SMART SM00382 168 308 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 SMART SM00448 7 118 2.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 7.4E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Pfam PF00158 Sigma-54 interaction domain 148 311 2.7E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Gene3D G3DSA:3.40.50.300 138 315 1.2E-55 T 14-10-2018 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Gene3D G3DSA:1.10.8.60 316 377 1.8E-13 T 14-10-2018 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Gene3D G3DSA:1.10.10.60 395 445 1.5E-7 T 14-10-2018 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 SUPERFAMILY SSF52172 7 191 2.42E-41 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 Gene3D G3DSA:3.40.50.2300 5 137 4.7E-34 T 14-10-2018 BJD94_17345 f7bd66e6c013456b7728cf42912e73d8 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_01200 cc3046027109f8b311c07d38279db41b 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 3.4E-20 T 14-10-2018 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 Gene3D G3DSA:3.20.20.70 2 246 2.7E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 44 244 1.6E-44 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 2 47 1.0E-10 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 SUPERFAMILY SSF102114 23 220 2.35E-29 T 14-10-2018 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.6E-107 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 Pfam PF04055 Radical SAM superfamily 24 178 7.4E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_01200 cc3046027109f8b311c07d38279db41b 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 197 9.3E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.40.50.300 5 202 2.2E-68 T 14-10-2018 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.870 310 594 1.4E-129 T 14-10-2018 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF52540 5 211 1.06E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF50447 155 303 1.04E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 402 516 1.39E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.30.10 203 303 4.9E-35 T 14-10-2018 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.240 393 486 1.4E-129 T 14-10-2018 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.1E-295 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.1E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.50.250 487 603 1.4E-129 T 14-10-2018 BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00679 Elongation factor G C-terminus 399 480 7.0E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 306 391 3.35E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like BJD94_10535 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.4E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 Gene3D G3DSA:3.30.450.20 15 117 7.2E-26 T 14-10-2018 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 SUPERFAMILY SSF58104 234 518 2.62E-69 T 14-10-2018 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 3.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 299 3.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 Pfam PF08447 PAS fold 31 115 3.7E-21 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 SMART SM00086 80 121 0.0051 T 14-10-2018 IPR001610 PAC motif BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 SUPERFAMILY SSF55785 22 115 2.51E-26 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 483 6.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 Gene3D G3DSA:1.10.287.950 226 518 1.0E-63 T 14-10-2018 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 SMART SM00283 256 517 3.2E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20600 212dd43ca96d0bdfc582d4c502368bfe 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 2.2E-12 T 14-10-2018 IPR000014 PAS domain BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 SUPERFAMILY SSF56047 2 129 4.97E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.189 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1490.10 73 130 1.2E-24 T 14-10-2018 BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1370.30 2 72 8.9E-27 T 14-10-2018 BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 Pfam PF00410 Ribosomal protein S8 5 129 7.4E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09810 a7e1c65688b12c11eba96fb883cdc2dc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 3.8E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 Gene3D G3DSA:3.30.499.20 4 286 1.9E-98 T 14-10-2018 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 3.7E-265 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 SUPERFAMILY SSF53732 1 465 3.66E-163 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 Gene3D G3DSA:3.30.499.10 328 466 1.1E-48 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD94_09370 f51ff0a22ecc3cb3ebb4a7400537f3f0 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.737 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 SUPERFAMILY SSF52172 5 144 6.69E-42 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 295 7.7E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 Gene3D G3DSA:3.40.50.2300 6 142 1.1E-38 T 14-10-2018 BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 SMART SM00267 134 296 9.5E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 292 2.3E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 SMART SM00448 8 121 5.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 Gene3D G3DSA:3.30.70.270 143 300 4.7E-46 T 14-10-2018 BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 Pfam PF00072 Response regulator receiver domain 10 121 3.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06300 39c81c0587dab9420b58f2c493c6e3db 304 SUPERFAMILY SSF55073 150 294 9.42E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_18985 03c61273be4232626e6a21958fa7938c 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 339 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BJD94_18985 03c61273be4232626e6a21958fa7938c 376 Gene3D G3DSA:3.40.50.150 14 369 5.8E-76 T 14-10-2018 BJD94_18985 03c61273be4232626e6a21958fa7938c 376 SUPERFAMILY SSF53335 2 375 1.92E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_18985 03c61273be4232626e6a21958fa7938c 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 3 375 6.6E-175 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 BJD94_18985 03c61273be4232626e6a21958fa7938c 376 Gene3D G3DSA:3.40.1350.30 56 212 5.8E-76 T 14-10-2018 BJD94_18985 03c61273be4232626e6a21958fa7938c 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 209 375 6.2E-22 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BJD94_18985 03c61273be4232626e6a21958fa7938c 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 376 80.267 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 BJD94_15840 92de6295f836adfda36411bf19a3a886 201 SUPERFAMILY SSF52833 109 189 5.06E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15840 92de6295f836adfda36411bf19a3a886 201 PRINTS PR00160 Glutaredoxin signature 157 170 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_15840 92de6295f836adfda36411bf19a3a886 201 PRINTS PR00160 Glutaredoxin signature 171 184 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_15840 92de6295f836adfda36411bf19a3a886 201 PRINTS PR00160 Glutaredoxin signature 108 126 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_15840 92de6295f836adfda36411bf19a3a886 201 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BJD94_15840 92de6295f836adfda36411bf19a3a886 201 Gene3D G3DSA:3.40.30.10 109 185 4.4E-19 T 14-10-2018 BJD94_15840 92de6295f836adfda36411bf19a3a886 201 Pfam PF00462 Glutaredoxin 109 174 5.1E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 SUPERFAMILY SSF111369 56 112 4.97E-8 T 14-10-2018 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 SUPERFAMILY SSF111369 199 284 4.58E-5 T 14-10-2018 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 Gene3D G3DSA:1.10.287.470 90 212 3.5E-42 T 14-10-2018 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 4.4E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 Gene3D G3DSA:2.40.30.170 248 324 3.5E-42 T 14-10-2018 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 28 316 5.3E-7 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 Gene3D G3DSA:2.40.50.100 57 247 3.5E-42 T 14-10-2018 BJD94_18595 b46fcc2b26c2cf5bf263096f15a6fa04 368 SUPERFAMILY SSF111369 122 178 7.98E-5 T 14-10-2018 BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 Gene3D G3DSA:3.40.50.720 1 265 1.2E-54 T 14-10-2018 BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 SUPERFAMILY SSF51735 1 264 2.71E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 Pfam PF00106 short chain dehydrogenase 7 195 1.5E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_18455 3a80284f9a1d4bf40246896c3e650053 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0017 T 14-10-2018 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09775 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SUPERFAMILY SSF49303 219 329 4.6E-23 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SUPERFAMILY SSF51445 330 618 8.99E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Pfam PF00703 Glycosyl hydrolases family 2 219 329 1.1E-15 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Gene3D G3DSA:2.60.40.10 627 729 2.6E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 443 457 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1029 16.982 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 331 623 7.5E-111 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Pfam PF16353 Domain of unknown function(DUF4981) 638 723 1.1E-19 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SUPERFAMILY SSF49785 9 215 9.5E-65 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Gene3D G3DSA:3.20.20.80 330 620 2.1E-123 T 14-10-2018 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SMART SM01038 753 1027 3.7E-101 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 1.5E-54 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Gene3D G3DSA:2.60.40.10 218 329 3.6E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SUPERFAMILY SSF49303 633 727 2.3E-25 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Pfam PF02929 Beta galactosidase small chain 757 1025 1.2E-64 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 340 354 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 527 542 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 371 389 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 443 458 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 SUPERFAMILY SSF74650 737 1028 1.88E-90 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Gene3D G3DSA:2.60.120.260 7 216 1.8E-81 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18670 0b601f75cfe51a9b804ea9ced8ee1d40 1031 Gene3D G3DSA:2.70.98.10 735 1028 1.2E-92 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 SUPERFAMILY SSF55811 62 248 3.14E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 2.3E-10 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 PRINTS PR00502 NUDIX hydrolase family signature 159 173 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 PRINTS PR00502 NUDIX hydrolase family signature 173 188 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 Pfam PF00293 NUDIX domain 137 236 8.5E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.888 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 Gene3D G3DSA:3.90.79.10 131 260 1.7E-40 T 14-10-2018 BJD94_11970 8c9779c96cbd656ebe81d3d1c782f204 261 Gene3D G3DSA:3.90.79.20 3 130 4.6E-33 T 14-10-2018 BJD94_13965 caac0131ff2ca221feab25a160aadc51 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.899 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD94_13965 caac0131ff2ca221feab25a160aadc51 202 SUPERFAMILY SSF52540 1 193 6.08E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13965 caac0131ff2ca221feab25a160aadc51 202 Gene3D G3DSA:3.40.50.300 1 202 1.1E-67 T 14-10-2018 BJD94_13965 caac0131ff2ca221feab25a160aadc51 202 Pfam PF01121 Dephospho-CoA kinase 3 181 1.6E-76 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD94_13965 caac0131ff2ca221feab25a160aadc51 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.1E-68 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 712 729 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 25 285 8.3E-42 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 503 796 1.5E-59 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 SMART SM01217 329 405 2.2E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Gene3D G3DSA:3.40.50.1700 10 287 1.1E-76 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Gene3D G3DSA:2.60.40.10 301 419 2.9E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 SUPERFAMILY SSF51445 496 815 3.68E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 SUPERFAMILY SSF52279 25 288 1.15E-35 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 PRINTS PR00133 Glycosyl hydrolase family 3 signature 539 555 6.6E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 PRINTS PR00133 Glycosyl hydrolase family 3 signature 611 627 6.6E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 PRINTS PR00133 Glycosyl hydrolase family 3 signature 642 658 6.6E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 PRINTS PR00133 Glycosyl hydrolase family 3 signature 712 730 6.6E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 PRINTS PR00133 Glycosyl hydrolase family 3 signature 565 584 6.6E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Pfam PF14310 Fibronectin type III-like domain 329 404 2.3E-17 T 14-10-2018 IPR026891 Fibronectin type III-like domain BJD94_18580 fcb03c6740e331d48a4f5533f0143507 938 Gene3D G3DSA:3.20.20.300 494 806 2.1E-85 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD94_20080 ea6184b78409ec3681c12dd385d1303c 203 Gene3D G3DSA:2.60.120.590 14 201 2.2E-69 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BJD94_20080 ea6184b78409ec3681c12dd385d1303c 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 196 1.4E-31 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BJD94_20080 ea6184b78409ec3681c12dd385d1303c 203 SUPERFAMILY SSF51197 13 198 6.32E-68 T 14-10-2018 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 SUPERFAMILY SSF53649 11 504 4.88E-112 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 Gene3D G3DSA:3.30.40.70 439 462 5.8E-20 T 14-10-2018 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 Gene3D G3DSA:1.10.1200.140 388 438 6.7E-22 T 14-10-2018 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 Pfam PF00245 Alkaline phosphatase 26 503 4.3E-83 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 SMART SM00098 27 415 6.8E-55 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 Gene3D G3DSA:3.40.720.10 24 371 3.6E-135 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 Gene3D G3DSA:3.40.720.10 463 525 1.5E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_00975 f6a06eade1caa6b3bbf9381d5f52953e 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 SUPERFAMILY SSF89000 299 464 4.71E-50 T 14-10-2018 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 Pfam PF00682 HMGL-like 8 272 1.2E-59 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 Gene3D G3DSA:2.40.50.100 520 596 5.4E-24 T 14-10-2018 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 SUPERFAMILY SSF51569 1 302 1.37E-90 T 14-10-2018 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 590 2.7E-267 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 Pfam PF00364 Biotin-requiring enzyme 530 594 9.6E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 Pfam PF02436 Conserved carboxylase domain 294 494 1.5E-57 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 Gene3D G3DSA:3.20.20.70 1 466 1.8E-173 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_13880 1d64e1ff347b32ae3f45ef1cf503dc30 596 SUPERFAMILY SSF51230 521 595 2.49E-21 T 14-10-2018 IPR011053 Single hybrid motif BJD94_06625 c92778850dc148698fff783120a19164 595 Pfam PF02743 Cache domain 34 271 2.1E-14 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_06625 c92778850dc148698fff783120a19164 595 Gene3D G3DSA:3.30.450.20 41 279 5.6E-84 T 14-10-2018 BJD94_06625 c92778850dc148698fff783120a19164 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 440 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_06625 c92778850dc148698fff783120a19164 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 589 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06625 c92778850dc148698fff783120a19164 595 PIRSF PIRSF036431 1 595 4.9E-205 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) BJD94_06625 c92778850dc148698fff783120a19164 595 Gene3D G3DSA:3.30.565.10 444 594 3.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06625 c92778850dc148698fff783120a19164 595 SUPERFAMILY SSF103190 48 187 2.35E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_06625 c92778850dc148698fff783120a19164 595 Gene3D G3DSA:1.10.287.130 348 435 6.2E-20 T 14-10-2018 BJD94_06625 c92778850dc148698fff783120a19164 595 SUPERFAMILY SSF55874 440 590 1.96E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06625 c92778850dc148698fff783120a19164 595 SUPERFAMILY SSF47384 367 440 2.75E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_06625 c92778850dc148698fff783120a19164 595 Gene3D G3DSA:3.30.450.20 54 175 5.6E-84 T 14-10-2018 BJD94_06625 c92778850dc148698fff783120a19164 595 SMART SM00387 483 592 6.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06625 c92778850dc148698fff783120a19164 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06625 c92778850dc148698fff783120a19164 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06625 c92778850dc148698fff783120a19164 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06625 c92778850dc148698fff783120a19164 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06625 c92778850dc148698fff783120a19164 595 SMART SM00388 372 440 2.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_10220 4576903cd7f4107f8bdee5f1cc5fa10a 78 Pfam PF00830 Ribosomal L28 family 3 62 1.1E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10220 4576903cd7f4107f8bdee5f1cc5fa10a 78 SUPERFAMILY SSF143800 2 76 1.35E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10220 4576903cd7f4107f8bdee5f1cc5fa10a 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.6E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_10220 4576903cd7f4107f8bdee5f1cc5fa10a 78 Gene3D G3DSA:2.30.170.40 2 78 2.0E-32 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10220 4576903cd7f4107f8bdee5f1cc5fa10a 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.065 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 108 128 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 212 231 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 88 105 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 173 196 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 238 257 4.1E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 SUPERFAMILY SSF51735 8 260 4.72E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 Gene3D G3DSA:3.40.50.720 2 261 4.4E-71 T 14-10-2018 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 261 3.1E-110 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BJD94_16630 a73401d0b435828e8c6680988bbe839f 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 3.0E-54 T 14-10-2018 BJD94_13220 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Gene3D G3DSA:3.30.70.970 1 132 2.4E-58 T 14-10-2018 IPR036701 RraB-like superfamily BJD94_13220 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 SUPERFAMILY SSF89946 8 126 4.97E-39 T 14-10-2018 IPR036701 RraB-like superfamily BJD94_13220 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.2E-34 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain BJD94_13220 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.753 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B BJD94_13220 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 PIRSF PIRSF018193 8 140 4.2E-59 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B BJD94_00005 b1b9cf1c3a4f33916456be95a80b5830 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 1.3E-47 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BJD94_00005 b1b9cf1c3a4f33916456be95a80b5830 142 SUPERFAMILY SSF82649 4 141 3.77E-50 T 14-10-2018 BJD94_00005 b1b9cf1c3a4f33916456be95a80b5830 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 3.7E-47 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BJD94_00005 b1b9cf1c3a4f33916456be95a80b5830 142 Gene3D G3DSA:3.90.1010.10 1 142 8.3E-52 T 14-10-2018 BJD94_14785 b1b9cf1c3a4f33916456be95a80b5830 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 1.3E-47 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE BJD94_14785 b1b9cf1c3a4f33916456be95a80b5830 142 SUPERFAMILY SSF82649 4 141 3.77E-50 T 14-10-2018 BJD94_14785 b1b9cf1c3a4f33916456be95a80b5830 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 3.7E-47 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BJD94_14785 b1b9cf1c3a4f33916456be95a80b5830 142 Gene3D G3DSA:3.90.1010.10 1 142 8.3E-52 T 14-10-2018 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 156 587 1.9E-162 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 533 566 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Gene3D G3DSA:3.55.50.30 138 252 3.2E-38 T 14-10-2018 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Pfam PF03958 Bacterial type II/III secretion system short domain 255 320 1.6E-11 T 14-10-2018 IPR005644 NolW-like BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Gene3D G3DSA:2.60.40.3470 22 137 3.1E-14 T 14-10-2018 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 589 9.1E-21 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 449 9.1E-21 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 320 330 9.1E-21 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 552 570 9.1E-21 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 9.1E-21 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Gene3D G3DSA:3.30.1370.120 253 316 2.9E-11 T 14-10-2018 IPR038591 NolW-like superfamily BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Pfam PF07660 Secretin and TonB N terminus short domain 181 229 8.6E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 SMART SM00965 181 229 7.2E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD94_12800 aeb372339bebf9c771d0d4c32e1bd115 589 Pfam PF00263 Bacterial type II and III secretion system protein 429 587 1.8E-45 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD94_03050 67c4410043520dc6340d78f14c972673 93 Gene3D G3DSA:3.40.1620.40 12 74 6.7E-11 T 14-10-2018 BJD94_03050 67c4410043520dc6340d78f14c972673 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 4.7E-17 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD94_03050 67c4410043520dc6340d78f14c972673 93 SUPERFAMILY SSF143120 10 81 2.49E-17 T 14-10-2018 IPR036165 YefM-like superfamily BJD94_03050 67c4410043520dc6340d78f14c972673 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 2.3E-13 T 14-10-2018 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 SUPERFAMILY SSF51395 1 312 6.96E-72 T 14-10-2018 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.571 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 294 2.8E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 PIRSF PIRSF006621 1 318 2.4E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 Gene3D G3DSA:3.20.20.70 1 242 1.3E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_01815 6b11322649ef5d2496a401ffe7359f21 318 Gene3D G3DSA:1.20.225.30 243 313 4.6E-25 T 14-10-2018 BJD94_16035 8de8618e09ef0676152307b331527f64 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.459 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BJD94_16035 8de8618e09ef0676152307b331527f64 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 3.8E-181 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BJD94_16035 8de8618e09ef0676152307b331527f64 348 Gene3D G3DSA:3.20.20.70 1 345 5.0E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_16035 8de8618e09ef0676152307b331527f64 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 336 1.1E-81 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BJD94_16035 8de8618e09ef0676152307b331527f64 348 SMART SM01240 7 344 1.1E-137 T 14-10-2018 BJD94_16035 8de8618e09ef0676152307b331527f64 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BJD94_16035 8de8618e09ef0676152307b331527f64 348 SUPERFAMILY SSF51412 6 334 3.14E-100 T 14-10-2018 BJD94_16035 8de8618e09ef0676152307b331527f64 348 PIRSF PIRSF000235 1 348 7.1E-192 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Pfam PF08329 Chitinase A, N-terminal domain 21 156 9.9E-56 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Pfam PF00704 Glycosyl hydrolases family 18 161 575 1.7E-88 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SUPERFAMILY SSF51055 784 841 1.57E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SMART SM00636 159 575 3.9E-162 T 14-10-2018 IPR011583 Chitinase II GO:0008061 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:3.20.20.80 162 577 1.1E-173 T 14-10-2018 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SUPERFAMILY SSF51445 135 588 1.05E-89 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SUPERFAMILY SSF49299 596 688 3.33E-8 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SMART SM00089 51 134 5.7 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SMART SM00089 700 786 0.19 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SMART SM00089 600 690 1.1E-6 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:2.60.40.10 696 784 2.8E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SUPERFAMILY SSF81296 21 133 2.8E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SMART SM00495 794 839 4.4E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:2.60.40.10 596 695 1.9E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:2.60.40.10 22 132 3.2E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 SUPERFAMILY SSF54556 461 546 3.33E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Pfam PF02010 REJ domain 604 738 4.9E-6 T 14-10-2018 IPR002859 PKD/REJ-like domain BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:2.10.10.20 794 837 7.4E-17 T 14-10-2018 BJD94_18150 8e41fd68fe5e3bb750b5a8cff9431230 845 Gene3D G3DSA:3.10.50.10 466 551 1.1E-173 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily BJD94_19775 4ada92f5e2aa247d56f274e3bb455479 177 Pfam PF10531 SLBB domain 105 152 9.2E-16 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_19775 4ada92f5e2aa247d56f274e3bb455479 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 99 1.2E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BJD94_19775 4ada92f5e2aa247d56f274e3bb455479 177 Gene3D G3DSA:3.30.1950.10 31 103 3.5E-26 T 14-10-2018 BJD94_19775 4ada92f5e2aa247d56f274e3bb455479 177 Gene3D G3DSA:3.10.560.10 19 172 3.5E-26 T 14-10-2018 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 219.874 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 SUPERFAMILY SSF52402 174 372 1.01E-40 T 14-10-2018 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Gene3D G3DSA:3.30.2130.30 1 174 2.8E-32 T 14-10-2018 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 SUPERFAMILY SSF52821 401 481 1.83E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.6E-110 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Gene3D G3DSA:3.40.250.10 384 482 1.6E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Gene3D G3DSA:3.40.50.620 175 383 6.5E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 SUPERFAMILY SSF143437 1 173 1.57E-46 T 14-10-2018 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.6E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 SMART SM00981 75 165 4.6E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.1E-70 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 BJD94_07795 85f4bafbd640e43027069c9b822bb23f 482 Pfam PF02926 THUMP domain 59 158 8.8E-22 T 14-10-2018 IPR004114 THUMP domain GO:0003723 BJD94_04765 ea1ca4c27d443d52baee656268368059 254 Gene3D G3DSA:3.40.50.300 9 254 9.4E-53 T 14-10-2018 BJD94_04765 ea1ca4c27d443d52baee656268368059 254 SUPERFAMILY SSF52540 15 228 2.44E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04765 ea1ca4c27d443d52baee656268368059 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 42.445 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 BJD94_04765 ea1ca4c27d443d52baee656268368059 254 SMART SM00382 21 216 2.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04765 ea1ca4c27d443d52baee656268368059 254 Pfam PF00005 ABC transporter 14 167 7.7E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 SUPERFAMILY SSF52141 5 222 1.42E-95 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 Pfam PF03167 Uracil DNA glycosylase superfamily 53 207 2.2E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.175 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 SMART SM00986 49 210 5.0E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 Gene3D G3DSA:3.40.470.10 1 225 3.2E-104 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 SMART SM00987 49 210 5.0E-41 T 14-10-2018 BJD94_08705 cdc90b1bf05881847db663a064a49dbd 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 3.6E-88 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD94_09765 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_19975 76411f6e6b0ab834a43174c0940a0f13 141 PIRSF PIRSF006276 1 141 5.6E-43 T 14-10-2018 IPR006015 Universal stress protein A BJD94_19975 76411f6e6b0ab834a43174c0940a0f13 141 Pfam PF00582 Universal stress protein family 3 138 7.7E-13 T 14-10-2018 IPR006016 UspA BJD94_19975 76411f6e6b0ab834a43174c0940a0f13 141 Gene3D G3DSA:3.40.50.620 2 141 1.2E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_19975 76411f6e6b0ab834a43174c0940a0f13 141 SUPERFAMILY SSF52402 3 138 1.76E-24 T 14-10-2018 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 Gene3D G3DSA:1.20.272.10 208 317 1.3E-6 T 14-10-2018 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 SUPERFAMILY SSF52540 3 192 1.43E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 205 312 7.4E-20 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 SUPERFAMILY SSF48019 205 317 1.0E-23 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 Gene3D G3DSA:3.40.50.300 1 166 3.2E-49 T 14-10-2018 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 11 194 2.8E-60 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05685 c1858014ab360f4201f2079bc4ff61bd 318 Pfam PF13177 DNA polymerase III, delta subunit 10 165 2.8E-43 T 14-10-2018 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 SUPERFAMILY SSF56784 10 195 4.88E-42 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 3.5E-26 T 14-10-2018 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 Gene3D G3DSA:1.10.150.240 22 92 1.6E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 9.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 9.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 9.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 189 1.6E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 1.7E-61 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase BJD94_15590 59be2d3378a8b94f7f4f1bba3594bc24 200 Gene3D G3DSA:3.40.50.1000 12 192 1.6E-42 T 14-10-2018 IPR023214 HAD superfamily BJD94_18250 2c3273442e7d9b55393c2edcfa25d39f 694 Gene3D G3DSA:2.170.130.10 37 158 2.8E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_18250 2c3273442e7d9b55393c2edcfa25d39f 694 Pfam PF00593 TonB dependent receptor 209 693 1.2E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_18250 2c3273442e7d9b55393c2edcfa25d39f 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 153 5.6E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_18250 2c3273442e7d9b55393c2edcfa25d39f 694 Gene3D G3DSA:2.40.170.20 175 694 1.3E-54 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_18250 2c3273442e7d9b55393c2edcfa25d39f 694 SUPERFAMILY SSF56935 40 694 2.42E-76 T 14-10-2018 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 Pfam PF01584 CheW-like domain 21 155 8.5E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 SMART SM00260 17 153 6.3E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 Pfam PF00072 Response regulator receiver domain 184 302 8.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 SUPERFAMILY SSF50341 16 157 1.26E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 PIRSF PIRSF002867 1 308 3.6E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 Gene3D G3DSA:2.30.30.40 23 147 1.5E-28 T 14-10-2018 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 Gene3D G3DSA:2.40.50.180 39 153 1.5E-28 T 14-10-2018 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 SUPERFAMILY SSF52172 183 306 5.55E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 Gene3D G3DSA:3.40.50.2300 170 308 1.4E-25 T 14-10-2018 BJD94_07315 6ac1c9d836bd38dcb56dacdbee1ab33c 308 SMART SM00448 182 302 2.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_15435 f8226f05922612b6e64c64fb7ca3f2bf 129 SUPERFAMILY SSF46955 4 117 3.19E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_15435 f8226f05922612b6e64c64fb7ca3f2bf 129 SMART SM00422 4 71 1.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_15435 f8226f05922612b6e64c64fb7ca3f2bf 129 Gene3D G3DSA:1.10.1660.10 1 128 3.6E-26 T 14-10-2018 BJD94_15435 f8226f05922612b6e64c64fb7ca3f2bf 129 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.0E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Pfam PF00072 Response regulator receiver domain 668 778 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF55874 344 517 9.82E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Gene3D G3DSA:1.20.120.160 816 928 1.1E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Pfam PF01627 Hpt domain 836 917 1.5E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SMART SM00304 198 250 3.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF47384 275 356 1.04E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SMART SM00448 666 779 6.1E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF158472 200 247 4.84E-6 T 14-10-2018 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF52172 533 644 1.57E-5 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SMART SM00387 402 518 5.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SMART SM00073 826 924 3.9E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 2.4E-50 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF47226 762 916 1.3E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Gene3D G3DSA:3.40.50.2300 653 787 3.5E-39 T 14-10-2018 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Gene3D G3DSA:1.10.287.130 277 356 7.5E-27 T 14-10-2018 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Gene3D G3DSA:3.30.565.10 357 521 6.2E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 2.8E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SUPERFAMILY SSF52172 664 782 2.13E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 SMART SM00388 290 355 3.4E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_13730 f08b73038e21f450f8e3f7fe08a5abee 928 Gene3D G3DSA:1.20.1480.50 164 270 1.8E-7 T 14-10-2018 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 SUPERFAMILY SSF53623 97 308 3.27E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 7.8E-260 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Gene3D G3DSA:3.40.1190.10 91 313 3.8E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 388 4.0E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Gene3D G3DSA:3.90.190.20 314 450 2.4E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Gene3D G3DSA:3.40.50.720 1 90 3.4E-35 T 14-10-2018 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.5E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.001 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 Pfam PF08245 Mur ligase middle domain 108 291 1.3E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 SUPERFAMILY SSF51984 1 89 4.45E-23 T 14-10-2018 BJD94_09610 c6dc87b94f3bbf8580ec32c69121d11d 453 SUPERFAMILY SSF53244 311 448 1.11E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 SUPERFAMILY SSF50677 205 408 8.06E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 2.0E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 SUPERFAMILY SSF52374 4 652 2.21E-138 T 14-10-2018 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.8E-219 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Gene3D G3DSA:3.40.50.620 25 634 1.0E-242 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 1.4E-294 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 850 6.0E-25 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Gene3D G3DSA:3.90.740.10 195 413 1.0E-242 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 SUPERFAMILY SSF47323 657 939 1.05E-72 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.47 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD94_08550 b239aa6231e3fe3c375e0e64cac70e3d 948 Gene3D G3DSA:1.10.730.20 645 940 6.5E-85 T 14-10-2018 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 SMART SM00304 224 278 2.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 521 8.6E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 SMART SM00283 282 554 7.8E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 Gene3D G3DSA:1.10.287.950 224 555 1.6E-69 T 14-10-2018 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 Gene3D G3DSA:3.30.450.20 36 181 1.4E-53 T 14-10-2018 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 Pfam PF00672 HAMP domain 225 274 3.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 SMART SM01049 42 131 1.2E-32 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 Pfam PF17200 Single Cache domain 2 45 188 1.7E-38 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_10230 a192d6f2da5e3aeff3d9459db7e0899b 555 SUPERFAMILY SSF58104 246 555 1.57E-72 T 14-10-2018 BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Gene3D G3DSA:3.30.450.20 129 239 3.2E-8 T 14-10-2018 BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SMART SM00052 420 666 3.1E-104 T 14-10-2018 IPR001633 EAL domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 119 3.0E-8 T 14-10-2018 IPR000014 PAS domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Gene3D G3DSA:3.30.70.270 250 422 1.9E-49 T 14-10-2018 BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Pfam PF13188 PAS domain 132 183 9.7E-7 T 14-10-2018 IPR000014 PAS domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Pfam PF00563 EAL domain 427 661 3.6E-72 T 14-10-2018 IPR001633 EAL domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SUPERFAMILY SSF55785 118 201 2.27E-7 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Gene3D G3DSA:3.30.450.20 3 128 3.1E-12 T 14-10-2018 BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Gene3D G3DSA:3.20.20.450 423 676 4.7E-94 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SUPERFAMILY SSF55785 13 118 1.64E-9 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SMART SM00267 238 410 1.3E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 8.8E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SMART SM00091 8 74 1.2E-4 T 14-10-2018 IPR000014 PAS domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SMART SM00091 131 197 0.012 T 14-10-2018 IPR000014 PAS domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SUPERFAMILY SSF141868 427 674 1.57E-84 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Pfam PF08448 PAS fold 15 120 5.3E-8 T 14-10-2018 IPR013656 PAS fold-4 BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 5.0E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_14395 724c2427ce0142b4e257d7c8354564ab 679 SUPERFAMILY SSF55073 258 412 1.49E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_10630 485671c6c9170cc29d29964455eb0f9c 201 Gene3D G3DSA:3.30.1050.10 7 119 3.8E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_10630 485671c6c9170cc29d29964455eb0f9c 201 SUPERFAMILY SSF55718 13 117 2.18E-9 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_10630 485671c6c9170cc29d29964455eb0f9c 201 Pfam PF02036 SCP-2 sterol transfer family 18 111 1.8E-21 T 14-10-2018 IPR003033 SCP2 sterol-binding domain BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 1.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 SMART SM00847 387 476 7.9E-8 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 SUPERFAMILY SSF52540 10 467 1.58E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 SMART SM00490 226 327 9.2E-20 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 PIRSF PIRSF005496 1 819 0.0 T 14-10-2018 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 SMART SM00487 2 186 6.6E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Pfam PF00270 DEAD/DEAH box helicase 12 163 1.2E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Gene3D G3DSA:3.40.50.300 180 346 1.3E-53 T 14-10-2018 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Pfam PF04408 Helicase associated domain (HA2) 388 460 6.2E-7 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 9.1E-54 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BJD94_14085 5bf8a2489d0e3ca994412e046973e0cb 820 Gene3D G3DSA:3.40.50.300 1 179 7.0E-54 T 14-10-2018 BJD94_08745 1936d3c48abb730cd61443dcb6e9bd0b 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 3.3E-19 T 14-10-2018 IPR021710 Protein of unknown function DUF3293 BJD94_20115 7477eb3b834f0685c85b87e8f454febb 132 Gene3D G3DSA:3.30.300.20 35 132 2.9E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_20115 7477eb3b834f0685c85b87e8f454febb 132 Pfam PF02566 OsmC-like protein 29 127 1.0E-15 T 14-10-2018 IPR003718 OsmC/Ohr family BJD94_20115 7477eb3b834f0685c85b87e8f454febb 132 SUPERFAMILY SSF82784 1 131 1.44E-38 T 14-10-2018 IPR036102 OsmC/Ohr superfamily BJD94_20115 7477eb3b834f0685c85b87e8f454febb 132 Gene3D G3DSA:2.20.25.10 1 34 7.1E-20 T 14-10-2018 BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 Gene3D G3DSA:3.40.50.300 282 529 5.4E-51 T 14-10-2018 BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 Gene3D G3DSA:3.40.50.300 2 281 3.1E-57 T 14-10-2018 BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 Pfam PF00005 ABC transporter 337 466 1.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 SUPERFAMILY SSF52540 334 515 7.62E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 SUPERFAMILY SSF52540 7 237 2.87E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 Pfam PF00005 ABC transporter 18 184 2.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 SMART SM00382 343 511 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_03855 3a95781d5e4150c6a2758308a732d7fd 530 SMART SM00382 26 238 3.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 Gene3D G3DSA:2.70.98.10 87 462 4.1E-198 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 4.4E-123 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 Gene3D G3DSA:1.20.1610.10 579 785 4.1E-198 T 14-10-2018 BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 7.4E-97 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 Gene3D G3DSA:3.30.2080.10 383 913 4.1E-198 T 14-10-2018 BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 Gene3D G3DSA:1.20.1050.60 463 578 4.1E-198 T 14-10-2018 BJD94_18820 a6221d5ccec8a3c97dbdce43f3c148ce 943 SUPERFAMILY SSF48208 353 904 2.55E-8 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_02795 86d1ae13dc5cbfd284891542f7462504 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 7.0E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_02795 86d1ae13dc5cbfd284891542f7462504 137 Gene3D G3DSA:3.10.180.10 5 135 1.2E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02795 86d1ae13dc5cbfd284891542f7462504 137 SUPERFAMILY SSF54593 9 133 8.86E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 SUPERFAMILY SSF55604 399 472 8.37E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 Gene3D G3DSA:3.30.1360.60 394 475 7.7E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.4E-74 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.6E-197 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_05675 b5c5ecda42212e5ec7c84a6fe3319447 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 2.6E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 Gene3D G3DSA:2.40.420.20 268 335 3.1E-68 T 14-10-2018 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 SUPERFAMILY SSF111369 47 262 1.7E-37 T 14-10-2018 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 Gene3D G3DSA:2.40.50.100 57 185 3.1E-68 T 14-10-2018 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 Gene3D G3DSA:1.10.287.470 92 151 3.1E-68 T 14-10-2018 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 Gene3D G3DSA:2.40.30.170 45 267 3.1E-68 T 14-10-2018 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 9.8E-86 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_06480 d1da0366091e687d71ce48f36433fc1a 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 257 1.5E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 PIRSF PIRSF005246 1 1487 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Gene3D G3DSA:1.20.58.850 621 831 1.4E-132 T 14-10-2018 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 11.104 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Pfam PF04310 MukB N-terminal 2 227 2.1E-121 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Gene3D G3DSA:3.40.1140.10 1 227 1.9E-98 T 14-10-2018 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Gene3D G3DSA:3.40.1140.10 1383 1469 1.5E-38 T 14-10-2018 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 SUPERFAMILY SSF52540 26 224 2.73E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Gene3D G3DSA:1.20.58.850 583 852 1.4E-132 T 14-10-2018 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 SUPERFAMILY SSF52540 21 1434 5.31E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.3E-14 T 14-10-2018 BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Pfam PF16330 MukB hinge domain 646 811 1.3E-70 T 14-10-2018 IPR032520 MukB, hinge domain BJD94_01415 8eaa4e5c40ea037daa6dd5138ae317bc 1487 Gene3D G3DSA:1.20.1060.30 668 779 1.4E-132 T 14-10-2018 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 SUPERFAMILY SSF51055 19 78 8.89E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:2.60.40.10 335 427 4.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:2.60.40.10 84 173 4.9E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:2.60.40.10 178 271 3.8E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 1.7E-25 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 SMART SM00636 523 825 2.9E-4 T 14-10-2018 IPR011583 Chitinase II GO:0008061 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:2.60.40.10 429 521 1.8E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 SMART SM00495 277 326 0.0034 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 SMART SM00495 28 74 1.4E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 SUPERFAMILY SSF51445 522 833 4.22E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:3.20.20.80 522 842 1.2E-75 T 14-10-2018 BJD94_00135 29e32fe1ddae31ae58b960e2bf6c9e98 846 Gene3D G3DSA:2.10.10.20 8 79 4.7E-10 T 14-10-2018 BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 SUPERFAMILY SSF47240 4 157 4.06E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00819 Dps protein family signature 2. 65 79 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 Pfam PF00210 Ferritin-like domain 19 157 4.4E-25 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 Gene3D G3DSA:1.20.1260.10 1 157 1.5E-54 T 14-10-2018 IPR012347 Ferritin-like BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BJD94_02160 2eb5f09127002aa6b25a3b0c2096e5d3 157 PIRSF PIRSF005900 1 157 1.6E-44 T 14-10-2018 IPR002177 DNA-binding protein Dps BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 10 698 1.6E-261 T 14-10-2018 IPR017750 ATPase, type I secretion system BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 Pfam PF00664 ABC transporter transmembrane region 161 419 7.8E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 Gene3D G3DSA:1.20.1560.10 144 456 1.3E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 Gene3D G3DSA:3.90.70.10 6 127 4.6E-15 T 14-10-2018 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 SMART SM00382 497 682 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 SUPERFAMILY SSF90123 142 455 7.32E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 Gene3D G3DSA:3.40.50.300 457 705 1.2E-73 T 14-10-2018 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 Pfam PF00005 ABC transporter 488 637 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19455 6c3dce736ff64ae810666ad66f69e814 717 SUPERFAMILY SSF52540 464 698 7.94E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 SMART SM00471 14 139 3.2E-8 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 182 41.908 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 68 164 8.0E-42 T 14-10-2018 BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 Gene3D G3DSA:1.10.3210.10 1 182 1.4E-79 T 14-10-2018 BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 Pfam PF13023 HD domain 2 146 3.3E-17 T 14-10-2018 IPR006674 HD domain BJD94_06570 f89a8bd7b953ad016d5691a2b8dc74d4 182 SUPERFAMILY SSF109604 1 181 4.71E-40 T 14-10-2018 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 1 1106 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Gene3D G3DSA:1.10.10.160 64 172 1.3E-118 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Gene3D G3DSA:1.10.10.990 868 946 1.1E-18 T 14-10-2018 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 PIRSF PIRSF000980 1 1145 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Gene3D G3DSA:1.10.486.10 442 654 5.1E-192 T 14-10-2018 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 SUPERFAMILY SSF52540 349 806 2.76E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1106 20.259 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 SUPERFAMILY SSF52980 828 1125 5.25E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 799 6.0E-292 T 14-10-2018 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 SUPERFAMILY SSF52540 1 336 5.84E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Gene3D G3DSA:3.40.50.300 324 800 5.1E-192 T 14-10-2018 BJD94_14745 369e1a20a3038a638ac8a759a8efecdd 1147 Gene3D G3DSA:3.40.50.10930 1 306 1.3E-118 T 14-10-2018 BJD94_14275 020f2845adc61860237ae40c41cd0320 98 Gene3D G3DSA:3.30.110.60 1 98 1.4E-35 T 14-10-2018 IPR035920 YhbY-like superfamily BJD94_14275 020f2845adc61860237ae40c41cd0320 98 SMART SM01103 3 86 4.2E-39 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD94_14275 020f2845adc61860237ae40c41cd0320 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.3E-36 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BJD94_14275 020f2845adc61860237ae40c41cd0320 98 SUPERFAMILY SSF75471 1 94 1.7E-28 T 14-10-2018 IPR035920 YhbY-like superfamily BJD94_14275 020f2845adc61860237ae40c41cd0320 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 9.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD94_14275 020f2845adc61860237ae40c41cd0320 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.5E-19 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD94_21395 85f6dc40ab9c9a6569d41ddb4865040f 144 SUPERFAMILY SSF54637 1 138 3.32E-29 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_21395 85f6dc40ab9c9a6569d41ddb4865040f 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 2.6E-37 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BJD94_21395 85f6dc40ab9c9a6569d41ddb4865040f 144 Gene3D G3DSA:3.10.129.10 1 142 3.2E-56 T 14-10-2018 BJD94_21395 85f6dc40ab9c9a6569d41ddb4865040f 144 Pfam PF03061 Thioesterase superfamily 52 128 1.7E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 SMART SM00471 403 540 1.3E-4 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 Pfam PF13487 HD domain 458 520 2.3E-13 T 14-10-2018 BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 Gene3D G3DSA:1.10.3210.10 384 584 2.7E-67 T 14-10-2018 BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 SUPERFAMILY SSF109604 399 570 1.38E-34 T 14-10-2018 BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 Gene3D G3DSA:3.40.50.2300 79 305 2.5E-5 T 14-10-2018 BJD94_21280 94b8067f047e86ec8f52033d7d46286a 591 Gene3D G3DSA:3.40.50.2300 150 272 2.5E-5 T 14-10-2018 BJD94_04025 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 SUPERFAMILY SSF46626 21 202 2.81E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04025 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.1E-80 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BJD94_04025 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Gene3D G3DSA:1.10.760.10 46 206 4.8E-72 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04025 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 2.4E-81 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO BJD94_14945 4e523a1673c80bbd6c4fe26bc93a4fde 107 Gene3D G3DSA:2.102.10.10 1 106 5.1E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_14945 4e523a1673c80bbd6c4fe26bc93a4fde 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 1.0E-32 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD94_14945 4e523a1673c80bbd6c4fe26bc93a4fde 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 2.1E-40 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD94_14945 4e523a1673c80bbd6c4fe26bc93a4fde 107 SUPERFAMILY SSF50022 1 105 3.93E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_19755 83c851d7f911d6d77a62985e98252edb 343 Pfam PF13439 Glycosyltransferase Family 4 13 158 1.0E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_19755 83c851d7f911d6d77a62985e98252edb 343 Gene3D G3DSA:3.40.50.2000 3 175 1.5E-9 T 14-10-2018 BJD94_19755 83c851d7f911d6d77a62985e98252edb 343 SUPERFAMILY SSF53756 3 313 7.53E-33 T 14-10-2018 BJD94_19755 83c851d7f911d6d77a62985e98252edb 343 Pfam PF13692 Glycosyl transferases group 1 182 311 1.8E-15 T 14-10-2018 BJD94_19755 83c851d7f911d6d77a62985e98252edb 343 Gene3D G3DSA:3.40.50.2000 176 315 3.3E-17 T 14-10-2018 BJD94_19090 4805fa671db28af8e658c975f0b53855 239 Pfam PF00106 short chain dehydrogenase 3 189 1.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 SUPERFAMILY SSF51735 3 224 1.94E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_19090 4805fa671db28af8e658c975f0b53855 239 Gene3D G3DSA:3.40.50.720 1 239 6.8E-79 T 14-10-2018 BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_19090 4805fa671db28af8e658c975f0b53855 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.1E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 SUPERFAMILY SSF56059 104 322 2.47E-69 T 14-10-2018 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Gene3D G3DSA:3.30.470.20 191 329 3.1E-62 T 14-10-2018 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 SMART SM01210 330 423 5.0E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 SMART SM01209 103 296 9.9E-143 T 14-10-2018 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 6.7E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 SUPERFAMILY SSF52440 1 103 4.6E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 SUPERFAMILY SSF51246 329 424 5.02E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 9.9E-187 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.6E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Gene3D G3DSA:3.90.600.10 330 429 9.5E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Gene3D G3DSA:3.40.50.20 2 95 1.8E-37 T 14-10-2018 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.163 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD94_12020 7fb5bdfef59dc58145add101858daa7f 429 Gene3D G3DSA:3.30.1490.20 121 190 2.3E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_02685 766ff85f348dc2880e58ea797ea6633b 138 SUPERFAMILY SSF160631 7 130 2.09E-11 T 14-10-2018 BJD94_02685 766ff85f348dc2880e58ea797ea6633b 138 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 5 122 1.3E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain BJD94_02685 766ff85f348dc2880e58ea797ea6633b 138 Gene3D G3DSA:3.40.1580.10 2 136 4.7E-10 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BJD94_03285 766ff85f348dc2880e58ea797ea6633b 138 SUPERFAMILY SSF160631 7 130 2.09E-11 T 14-10-2018 BJD94_03285 766ff85f348dc2880e58ea797ea6633b 138 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 5 122 1.3E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain BJD94_03285 766ff85f348dc2880e58ea797ea6633b 138 Gene3D G3DSA:3.40.1580.10 2 136 4.7E-10 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BJD94_19700 5bc9cd65c87d987fa868f907ba7e5da9 305 Pfam PF01882 Protein of unknown function DUF58 53 137 1.5E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 BJD94_17705 204a154f7627101a0129a92e07379e91 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_17705 204a154f7627101a0129a92e07379e91 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 1.5E-25 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_17705 204a154f7627101a0129a92e07379e91 412 SMART SM00487 19 212 3.6E-48 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_17705 204a154f7627101a0129a92e07379e91 412 Gene3D G3DSA:3.40.50.300 1 202 1.8E-66 T 14-10-2018 BJD94_17705 204a154f7627101a0129a92e07379e91 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 2.4E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_17705 204a154f7627101a0129a92e07379e91 412 SUPERFAMILY SSF52540 68 351 8.38E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17705 204a154f7627101a0129a92e07379e91 412 SMART SM00490 250 331 4.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_17705 204a154f7627101a0129a92e07379e91 412 Gene3D G3DSA:3.40.50.300 205 397 3.0E-44 T 14-10-2018 BJD94_06385 e75eb1ef0e44e8c27eb1545a1dfe2f29 447 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 27 441 20.953 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_06385 e75eb1ef0e44e8c27eb1545a1dfe2f29 447 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 30 435 1.6E-104 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_06385 e75eb1ef0e44e8c27eb1545a1dfe2f29 447 Pfam PF06965 Na+/H+ antiporter 1 29 435 3.7E-127 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 BJD94_06385 e75eb1ef0e44e8c27eb1545a1dfe2f29 447 Gene3D G3DSA:1.20.1530.10 293 442 6.8E-48 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily BJD94_06385 e75eb1ef0e44e8c27eb1545a1dfe2f29 447 Gene3D G3DSA:1.20.1530.10 24 282 3.9E-75 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Gene3D G3DSA:3.90.580.10 1 102 1.0E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Gene3D G3DSA:3.90.980.10 121 246 1.4E-44 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Gene3D G3DSA:1.10.860.10 447 589 2.6E-54 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SUPERFAMILY SSF57783 4 101 4.76E-38 T 14-10-2018 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SMART SM00493 265 336 4.4E-18 T 14-10-2018 IPR006171 TOPRIM domain BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 1.4E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SUPERFAMILY SSF56731 121 429 7.72E-103 T 14-10-2018 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Gene3D G3DSA:3.40.1360.10 247 373 1.1E-38 T 14-10-2018 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Hamap MF_00974 DNA primase [dnaG]. 4 585 28.863 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Pfam PF08278 DNA primase DnaG DnaB-binding 460 583 7.9E-36 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SMART SM00766 459 584 1.1E-53 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 Pfam PF13155 Toprim-like 269 355 2.4E-14 T 14-10-2018 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SMART SM00400 36 90 2.1E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 SUPERFAMILY SSF117023 456 587 8.37E-44 T 14-10-2018 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 1.9E-144 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BJD94_09145 e057a4d294cad991ec5b7600fee4fb72 589 PIRSF PIRSF002811 2 588 1.9E-143 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BJD94_18175 e98b69ce220b4f25e793333016db553c 602 Pfam PF17201 Cache 3/Cache 2 fusion domain 174 269 5.9E-7 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain BJD94_18175 e98b69ce220b4f25e793333016db553c 602 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 435 589 5.9E-27 T 14-10-2018 IPR000160 GGDEF domain BJD94_18175 e98b69ce220b4f25e793333016db553c 602 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 587 1.7E-26 T 14-10-2018 IPR000160 GGDEF domain BJD94_18175 e98b69ce220b4f25e793333016db553c 602 Gene3D G3DSA:3.30.70.270 432 596 2.3E-36 T 14-10-2018 BJD94_18175 e98b69ce220b4f25e793333016db553c 602 Gene3D G3DSA:3.30.450.20 144 270 2.3E-9 T 14-10-2018 BJD94_18175 e98b69ce220b4f25e793333016db553c 602 SUPERFAMILY SSF55073 441 590 1.02E-30 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_18175 e98b69ce220b4f25e793333016db553c 602 SMART SM00267 423 591 2.4E-28 T 14-10-2018 IPR000160 GGDEF domain BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Gene3D G3DSA:1.25.40.880 385 525 6.7E-59 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 SUPERFAMILY SSF55718 534 655 6.36E-37 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Pfam PF00753 Metallo-beta-lactamase superfamily 126 349 5.7E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Pfam PF14864 Alkyl sulfatase C-terminal 532 655 5.3E-41 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 SUPERFAMILY SSF56281 26 526 5.32E-156 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Gene3D G3DSA:3.60.15.30 25 384 2.8E-166 T 14-10-2018 BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Gene3D G3DSA:3.30.1050.10 528 655 4.8E-46 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 SMART SM00849 127 349 2.8E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_17360 2f5df2968534c9ec4cbb0f98abf555ea 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 524 1.4E-56 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 BJD94_16095 cbd89deab0560ffcf9ab5c7658d0530d 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.3E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 BJD94_16095 cbd89deab0560ffcf9ab5c7658d0530d 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.6E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 BJD94_19075 029bcb11395e202ff682bc0fef857474 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_19075 029bcb11395e202ff682bc0fef857474 118 Gene3D G3DSA:1.10.3830.10 3 118 8.6E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_19075 029bcb11395e202ff682bc0fef857474 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 2.9E-34 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 4.3E-36 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Gene3D G3DSA:3.40.50.11540 145 292 5.1E-13 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.5E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 769 247.335 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.1E-189 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Pfam PF12838 4Fe-4S dicluster domain 378 430 2.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Gene3D G3DSA:1.10.1060.10 364 445 5.5E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 SUPERFAMILY SSF142019 96 302 9.81E-60 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 Pfam PF10531 SLBB domain 296 345 4.1E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_06145 9982156a29a01fc526f58c9a4fbbb520 880 SUPERFAMILY SSF46548 336 446 6.28E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 SUPERFAMILY SSF160544 250 355 2.49E-39 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 Gene3D G3DSA:3.40.1690.10 218 358 5.9E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.3E-121 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-134 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_00655 2f94242aaef27afe3872d89f6677dd33 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD94_10980 8a63630586dd0172eb175718816646d8 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.7E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 BJD94_10980 8a63630586dd0172eb175718816646d8 88 Gene3D G3DSA:1.10.1580.20 1 88 8.0E-44 T 14-10-2018 IPR038134 YihD-like superfamily BJD94_10980 8a63630586dd0172eb175718816646d8 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 5.0E-40 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:1.10.10.10 165 247 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00100 30 151 2.4E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:2.60.120.10 43 164 8.3E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF46785 165 244 2.93E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF51206 23 162 2.36E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.4E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_03990 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00419 187 235 4.3E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 Gene3D G3DSA:3.40.50.10860 8 258 7.9E-85 T 14-10-2018 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 Gene3D G3DSA:3.40.50.720 119 239 7.9E-85 T 14-10-2018 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.9E-87 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.654 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 SUPERFAMILY SSF53223 6 105 1.15E-31 T 14-10-2018 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 SUPERFAMILY SSF51735 106 273 1.48E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 4.4E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD94_10900 3e45bcc7a2c513b89bb83f61abd8e681 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 6.7E-14 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BJD94_02490 acdf288a83c58bb85e530192ee532fdb 272 Pfam PF17131 Outer membrane lipoprotein-sorting protein 87 270 7.2E-66 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein BJD94_02490 acdf288a83c58bb85e530192ee532fdb 272 Gene3D G3DSA:2.50.20.10 34 270 1.6E-93 T 14-10-2018 BJD94_02490 acdf288a83c58bb85e530192ee532fdb 272 SUPERFAMILY SSF89392 111 213 4.32E-6 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 3.0E-94 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 4.9E-162 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 PIRSF PIRSF006621 1 323 1.3E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.441 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 SUPERFAMILY SSF51395 6 319 1.42E-74 T 14-10-2018 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 Gene3D G3DSA:3.20.20.70 4 245 1.0E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_12890 a8456aa67ced26a97cc49689ba49999a 326 Gene3D G3DSA:1.20.120.1460 249 325 2.2E-22 T 14-10-2018 BJD94_05130 2560402a35d8c97295c552e5df1f6d2e 310 Gene3D G3DSA:3.40.50.150 87 292 2.4E-43 T 14-10-2018 BJD94_05130 2560402a35d8c97295c552e5df1f6d2e 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 309 7.3E-169 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BJD94_05130 2560402a35d8c97295c552e5df1f6d2e 310 SUPERFAMILY SSF53335 4 287 2.41E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_06420 f57c152067c320f9480155fa762a2006 100 Gene3D G3DSA:1.10.10.10 1 100 7.5E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_06420 f57c152067c320f9480155fa762a2006 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 83 1.5E-26 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD94_06420 f57c152067c320f9480155fa762a2006 100 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 4 81 1.3E-14 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD94_06420 f57c152067c320f9480155fa762a2006 100 SUPERFAMILY SSF46767 2 84 4.97E-27 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 88 174 6.86E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 6 98 5.9E-17 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 189 260 2.7E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 362 434 1.8E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 104 171 1.2E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 255 364 2.65E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.0E-96 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 PIRSF PIRSF002111 1 534 6.4E-218 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 275 347 8.1E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 190 260 7.7E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 103 171 1.8E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 362 434 2.3E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 19 87 4.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SMART SM00316 449 520 1.1E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 189 277 1.42E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 444 528 2.5E-20 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 99 178 2.9E-5 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 347 438 5.97E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.6E-230 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 SUPERFAMILY SSF50249 429 539 8.21E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 358 443 1.5E-23 T 14-10-2018 BJD94_05605 1292af24d37cc3be6f87c53bfbd85f5a 556 Gene3D G3DSA:2.40.50.140 269 357 2.2E-31 T 14-10-2018 BJD94_16595 a2223ce34a6d6933151b9fc8bff8fd39 242 SMART SM00062 19 241 1.5E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_16595 a2223ce34a6d6933151b9fc8bff8fd39 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 240 3.5E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_16595 a2223ce34a6d6933151b9fc8bff8fd39 242 Gene3D G3DSA:3.40.190.10 28 239 9.4E-37 T 14-10-2018 BJD94_16595 a2223ce34a6d6933151b9fc8bff8fd39 242 SUPERFAMILY SSF53850 27 240 8.89E-39 T 14-10-2018 BJD94_16595 a2223ce34a6d6933151b9fc8bff8fd39 242 Gene3D G3DSA:3.40.190.10 103 201 9.4E-37 T 14-10-2018 BJD94_12770 dbf29496aff29810a760450638c34250 299 Gene3D G3DSA:1.10.10.10 1 84 7.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12770 dbf29496aff29810a760450638c34250 299 SUPERFAMILY SSF46785 1 86 5.15E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_12770 dbf29496aff29810a760450638c34250 299 Gene3D G3DSA:3.40.190.10 164 267 9.1E-65 T 14-10-2018 BJD94_12770 dbf29496aff29810a760450638c34250 299 Gene3D G3DSA:3.40.190.10 91 281 9.1E-65 T 14-10-2018 BJD94_12770 dbf29496aff29810a760450638c34250 299 SUPERFAMILY SSF53850 89 293 2.96E-38 T 14-10-2018 BJD94_12770 dbf29496aff29810a760450638c34250 299 Pfam PF03466 LysR substrate binding domain 89 292 3.6E-43 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_12770 dbf29496aff29810a760450638c34250 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_12770 dbf29496aff29810a760450638c34250 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_12770 dbf29496aff29810a760450638c34250 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_12770 dbf29496aff29810a760450638c34250 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 129 735 3.3E-246 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 SUPERFAMILY SSF81296 152 206 1.12E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 641 738 4.8E-16 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 SUPERFAMILY SSF81296 35 118 1.1E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Gene3D G3DSA:2.60.40.10 19 233 8.9E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 SMART SM00642 263 630 2.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 739 41.098 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Gene3D G3DSA:2.60.40.1180 636 738 7.3E-29 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 SUPERFAMILY SSF51011 636 738 6.24E-26 T 14-10-2018 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 146 220 6.5E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Pfam PF00128 Alpha amylase, catalytic domain 288 362 2.5E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 SUPERFAMILY SSF51445 196 629 3.49E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 Gene3D G3DSA:3.20.20.80 237 635 6.0E-162 T 14-10-2018 BJD94_18330 05b777bb14ab722057ea9d6dddaa6a46 739 PIRSF PIRSF000463 22 739 2.7E-279 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF54862 566 706 1.1E-21 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF54292 1 98 2.83E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.50.50.60 296 431 7.1E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 686 697 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF01568 Molydopterin dinucleotide binding domain 1282 1386 4.0E-30 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 2.0E-11 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 720 1390 1.8E-245 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF51971 190 430 4.12E-63 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.30.70.20 614 703 7.3E-19 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 720 737 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF50692 1250 1392 1.58E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF12838 4Fe-4S dicluster domain 634 700 3.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF53706 715 1249 6.94E-203 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.40.50.740 778 1240 5.7E-179 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 716 769 1.6E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:2.20.25.90 715 770 5.2E-20 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:2.40.40.20 1272 1393 2.8E-42 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SMART SM00926 715 770 3.3E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 488 4.3E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.2E-16 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 PRINTS PR00419 Adrenodoxin reductase family signature 257 267 1.2E-16 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.2E-16 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.2E-16 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1145 1162 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 175 8.4E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 SUPERFAMILY SSF46548 88 200 8.89E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Pfam PF00384 Molybdopterin oxidoreductase 773 1199 2.4E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.40.228.10 851 1052 5.7E-179 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.10.20.740 1 123 1.1E-25 T 14-10-2018 BJD94_18845 45603826ea93ea111c73ad933995ef57 1399 Gene3D G3DSA:3.50.50.60 179 295 3.5E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_04010 89495494f67e8ea4b641c996511ec0cc 158 Pfam PF05751 FixH 7 147 4.9E-44 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 2.2E-155 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 Pfam PF01368 DHH family 71 204 2.1E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 Pfam PF02272 DHHA1 domain 319 451 2.7E-26 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 Gene3D G3DSA:3.90.1640.30 45 323 9.2E-88 T 14-10-2018 BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 SUPERFAMILY SSF64182 45 462 3.14E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily BJD94_08650 013c6abc863c1f18ede379c8674fbc3b 579 Gene3D G3DSA:3.10.310.30 325 456 4.1E-30 T 14-10-2018 BJD94_17625 8dcbfb18a3dd35c725f29021a08ce2af 450 SUPERFAMILY SSF53850 21 405 8.03E-60 T 14-10-2018 BJD94_17625 8dcbfb18a3dd35c725f29021a08ce2af 450 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 4.0E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_17625 8dcbfb18a3dd35c725f29021a08ce2af 450 Gene3D G3DSA:3.40.190.10 39 340 9.3E-56 T 14-10-2018 BJD94_17625 8dcbfb18a3dd35c725f29021a08ce2af 450 Gene3D G3DSA:3.40.190.10 129 395 9.3E-56 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 SUPERFAMILY SSF55008 73 138 4.97E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 739 1.3E-81 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Gene3D G3DSA:3.30.70.100 70 135 5.7E-12 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Pfam PF00403 Heavy-metal-associated domain 76 125 1.0E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 673 1.2E-38 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 3.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00941 Cadmium-transporting ATPase signature 250 270 3.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00941 Cadmium-transporting ATPase signature 350 364 3.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 SUPERFAMILY SSF81665 218 748 7.59E-19 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 215 524 1.8E-94 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 215 762 1.1E-171 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Gene3D G3DSA:3.40.50.1000 447 712 2.8E-80 T 14-10-2018 IPR023214 HAD superfamily BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Gene3D G3DSA:3.40.1110.10 477 594 2.8E-80 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Pfam PF00122 E1-E2 ATPase 267 446 9.3E-48 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 695 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 619 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 679 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 598 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 9.7E-28 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 ProSitePatterns PS01229 Hypothetical cof family signature 2. 660 682 - T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 Gene3D G3DSA:2.70.150.20 265 370 1.5E-29 T 14-10-2018 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 SUPERFAMILY SSF81653 271 365 1.7E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD94_01050 94ac18be149634be54426d4dbdc89ed1 770 SUPERFAMILY SSF56784 465 760 2.34E-50 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 102 131 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 192 213 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 64 84 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 161 179 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 14 34 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 235 249 3.1E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 Pfam PF00487 Fatty acid desaturase 47 266 1.8E-19 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BJD94_20585 691e6c330595f16381d14c3c598bdb91 378 PIRSF PIRSF000345 5 337 5.8E-97 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 BJD94_13995 9b9a1cd1c5d7a2ee5768bc1346772841 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 169 5.8E-29 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD94_13995 9b9a1cd1c5d7a2ee5768bc1346772841 190 SMART SM00644 18 169 1.4E-55 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD94_13995 9b9a1cd1c5d7a2ee5768bc1346772841 190 SUPERFAMILY SSF55846 5 181 4.06E-66 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD94_13995 9b9a1cd1c5d7a2ee5768bc1346772841 190 Gene3D G3DSA:3.40.80.10 3 187 1.0E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 SUPERFAMILY SSF53613 10 297 2.65E-70 T 14-10-2018 IPR029056 Ribokinase-like BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 Pfam PF00294 pfkB family carbohydrate kinase 29 298 9.4E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 PIRSF PIRSF000535 6 315 2.3E-94 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 Gene3D G3DSA:3.40.1190.20 6 315 4.7E-94 T 14-10-2018 IPR029056 Ribokinase-like BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 313 2.9E-100 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 313 7.3E-101 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BJD94_21180 58be4e3c4bdd2c8815c824401b06a265 325 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 Gene3D G3DSA:1.20.1740.10 1 435 1.5E-59 T 14-10-2018 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.663 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 PIRSF PIRSF006060 1 432 3.8E-50 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 Pfam PF13520 Amino acid permease 9 414 7.5E-45 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 6.4E-204 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 BJD94_18235 97a38fbc8096233abf8f09831833668d 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 2.6E-125 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 BJD94_06160 dff030101bbaf8e50ffd0ae92dd5c123 230 PIRSF PIRSF006102 1 219 5.9E-79 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_06160 dff030101bbaf8e50ffd0ae92dd5c123 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.8E-88 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 BJD94_06160 dff030101bbaf8e50ffd0ae92dd5c123 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.186 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 BJD94_06160 dff030101bbaf8e50ffd0ae92dd5c123 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 3.6E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.3E-24 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.7E-92 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 SUPERFAMILY SSF46946 130 221 9.27E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 SMART SM01232 129 221 2.8E-42 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.7E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 41.454 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 9.0E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 SUPERFAMILY SSF81624 2 134 1.24E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 SUPERFAMILY SSF57716 217 268 6.27E-16 T 14-10-2018 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Gene3D G3DSA:3.20.190.10 2 128 1.3E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 SMART SM00898 2 115 1.1E-50 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD94_10205 f2d58dfc856788869bd8d4521aca6999 269 Gene3D G3DSA:1.10.8.50 131 269 2.0E-44 T 14-10-2018 BJD94_17515 d0ead41116c11e783f69b1d670aef806 391 Pfam PF01380 SIS domain 53 190 2.2E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_17515 d0ead41116c11e783f69b1d670aef806 391 SUPERFAMILY SSF53697 20 370 3.95E-48 T 14-10-2018 BJD94_17515 d0ead41116c11e783f69b1d670aef806 391 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 379 3.2E-186 T 14-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 BJD94_17515 d0ead41116c11e783f69b1d670aef806 391 Gene3D G3DSA:3.40.50.10490 201 373 1.0E-57 T 14-10-2018 BJD94_17515 d0ead41116c11e783f69b1d670aef806 391 Gene3D G3DSA:3.40.50.10490 4 198 3.1E-55 T 14-10-2018 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 Gene3D G3DSA:2.10.10.20 433 475 2.9E-16 T 14-10-2018 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 SUPERFAMILY SSF53955 88 349 2.53E-52 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_08125 72e917b2203319b161ac48a16865c05c 567 SUPERFAMILY SSF51055 434 475 1.03E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 Pfam PF00182 Chitinase class I 105 325 4.0E-31 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 Gene3D G3DSA:3.30.20.10 177 247 1.1E-76 T 14-10-2018 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 Pfam PF02839 Carbohydrate binding domain 450 472 4.9E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 Gene3D G3DSA:1.10.530.10 104 345 1.1E-76 T 14-10-2018 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 SMART SM00495 433 475 4.9E-16 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_08125 72e917b2203319b161ac48a16865c05c 567 SMART SM00495 519 564 1.4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 Gene3D G3DSA:1.10.1710.10 1 121 5.9E-24 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 Pfam PF17516 ProQ C-terminal domain 158 206 2.6E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 SUPERFAMILY SSF48657 4 117 2.22E-39 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 SMART SM00945 3 117 3.2E-63 T 14-10-2018 IPR016103 ProQ/FinO domain BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 207 30.433 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 BJD94_04135 d0af4621caf9cb2db210d87f5db2d08f 207 Pfam PF04352 ProQ/FINO family 6 113 7.1E-43 T 14-10-2018 IPR016103 ProQ/FinO domain BJD94_21755 70453974830fcd3b06b1ffbca3cce319 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.9E-147 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_21755 70453974830fcd3b06b1ffbca3cce319 442 PIRSF PIRSF004539 1 441 7.6E-182 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_21755 70453974830fcd3b06b1ffbca3cce319 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 4.9E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 Pfam PF02378 Phosphotransferase system, EIIC 1 339 6.7E-64 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 437 454 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 484 3.3E-23 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 Gene3D G3DSA:3.30.1360.60 420 499 7.7E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 SUPERFAMILY SSF55604 424 496 5.49E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 495 2.1E-202 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 BJD94_07065 dc5626fb41ad08a1c11a682f2ab9f522 509 Pfam PF00367 phosphotransferase system, EIIB 426 459 3.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_08685 b93f1d35aa4cbb4683148c88b002ad0b 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.2E-94 T 14-10-2018 IPR005583 Peroxide stress protein YaaA BJD94_08685 b93f1d35aa4cbb4683148c88b002ad0b 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.872 T 14-10-2018 IPR005583 Peroxide stress protein YaaA BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 Pfam PF04002 RadC-like JAB domain 104 222 1.9E-45 T 14-10-2018 IPR025657 RadC-like JAB domain BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 SUPERFAMILY SSF102712 130 192 5.89E-5 T 14-10-2018 BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 Gene3D G3DSA:3.40.140.10 102 224 3.8E-44 T 14-10-2018 BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 SUPERFAMILY SSF47781 17 91 3.37E-10 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_10225 e92d73aaf3a6349fa1e7248231ba6308 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 6.3E-78 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 BJD94_20070 5bee5e9075f1576ff919134e102219a8 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.1E-25 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BJD94_20070 5bee5e9075f1576ff919134e102219a8 402 Pfam PF07670 Nucleoside recognition 90 185 2.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_20070 5bee5e9075f1576ff919134e102219a8 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.7E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BJD94_20070 5bee5e9075f1576ff919134e102219a8 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 4.8E-139 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BJD94_04285 6eaef7b15c68bd3a3ef2a668da32ea18 213 Pfam PF02397 Bacterial sugar transferase 15 208 3.6E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase BJD94_13625 87abff35110c1b8c571240eeccb12314 411 Gene3D G3DSA:3.50.50.60 6 339 3.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13625 87abff35110c1b8c571240eeccb12314 411 Gene3D G3DSA:3.30.9.50 80 270 3.2E-118 T 14-10-2018 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 Pfam PF01494 FAD binding domain 5 347 6.8E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.7E-134 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 SUPERFAMILY SSF51905 5 386 2.69E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13625 87abff35110c1b8c571240eeccb12314 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.4E-20 T 14-10-2018 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.4E-20 T 14-10-2018 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.4E-20 T 14-10-2018 BJD94_13625 87abff35110c1b8c571240eeccb12314 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.4E-20 T 14-10-2018 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 Pfam PF00158 Sigma-54 interaction domain 5 168 2.4E-58 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 Gene3D G3DSA:3.40.50.300 1 176 1.7E-58 T 14-10-2018 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 339 1.3E-167 T 14-10-2018 IPR014317 Transcription activator PspF BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 SUPERFAMILY SSF46689 285 341 3.58E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 Pfam PF02954 Bacterial regulatory protein, Fis family 305 333 1.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 SUPERFAMILY SSF52540 4 237 6.59E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 Gene3D G3DSA:1.10.10.60 266 342 1.1E-5 T 14-10-2018 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 SMART SM00382 25 172 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 322 342 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 322 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_05195 047d64fbd978095d03dbdd5a456e09cd 345 Gene3D G3DSA:1.10.8.60 177 263 7.7E-25 T 14-10-2018 BJD94_08625 a191db493d3a3ea6b4a7c76700eec4bc 344 Gene3D G3DSA:3.20.20.100 1 344 6.9E-134 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD94_08625 a191db493d3a3ea6b4a7c76700eec4bc 344 SUPERFAMILY SSF51430 1 344 1.09E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD94_08625 a191db493d3a3ea6b4a7c76700eec4bc 344 Pfam PF00248 Aldo/keto reductase family 15 335 6.3E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 SUPERFAMILY SSF55874 367 479 4.58E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 SUPERFAMILY SSF47384 269 342 2.55E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 476 6.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 Pfam PF11884 Domain of unknown function (DUF3404) 18 274 8.9E-109 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 SMART SM00387 380 478 1.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 SMART SM00388 275 342 5.9E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 Gene3D G3DSA:3.30.565.10 340 475 3.8E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21560 9acc91993ca849cd636c837a17c4e1f8 483 Gene3D G3DSA:1.10.287.130 282 339 3.8E-17 T 14-10-2018 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 Gene3D G3DSA:3.30.70.1680 1 59 9.0E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 SUPERFAMILY SSF117130 1 54 4.32E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.8E-29 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 61 17.001 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD94_13830 984597e5e15a9a19dbde2d45e7c34b49 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Gene3D G3DSA:3.30.70.270 209 387 2.2E-32 T 14-10-2018 BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SMART SM00065 26 173 8.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Gene3D G3DSA:3.20.20.450 388 640 3.9E-97 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SUPERFAMILY SSF141868 389 638 7.32E-87 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SMART SM00267 204 374 6.5E-22 T 14-10-2018 IPR000160 GGDEF domain BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Pfam PF00563 EAL domain 391 625 1.2E-74 T 14-10-2018 IPR001633 EAL domain BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Gene3D G3DSA:3.30.450.40 24 178 1.1E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SMART SM00052 384 631 7.5E-117 T 14-10-2018 IPR001633 EAL domain BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SUPERFAMILY SSF55781 31 176 2.71E-20 T 14-10-2018 BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 370 4.9E-17 T 14-10-2018 IPR000160 GGDEF domain BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 SUPERFAMILY SSF55073 220 368 1.49E-26 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 368 1.2E-26 T 14-10-2018 IPR000160 GGDEF domain BJD94_20890 cb4d7a42be57ba0e5763134d57bd5c87 642 Pfam PF01590 GAF domain 32 156 5.6E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_02465 05acd3dcb055e39be658b54fc4821290 269 Gene3D G3DSA:1.10.260.40 3 73 7.1E-6 T 14-10-2018 BJD94_02465 05acd3dcb055e39be658b54fc4821290 269 SUPERFAMILY SSF47413 5 68 9.96E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_02465 05acd3dcb055e39be658b54fc4821290 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_02465 05acd3dcb055e39be658b54fc4821290 269 SMART SM00530 12 66 0.003 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-124 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 SUPERFAMILY SSF51735 3 240 1.64E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.3E-57 T 14-10-2018 BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_06790 278611f15c3eaa41853f68d1d74f6844 241 Gene3D G3DSA:3.40.50.720 3 240 7.3E-73 T 14-10-2018 BJD94_19550 a8e5608610223acf80e67645c00416bb 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 6.0E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_19550 a8e5608610223acf80e67645c00416bb 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.6E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_19550 a8e5608610223acf80e67645c00416bb 527 SMART SM00267 358 526 2.1E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_19550 a8e5608610223acf80e67645c00416bb 527 SUPERFAMILY SSF55073 374 525 3.69E-36 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19550 a8e5608610223acf80e67645c00416bb 527 SUPERFAMILY SSF48452 38 245 3.95E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19550 a8e5608610223acf80e67645c00416bb 527 Gene3D G3DSA:1.25.40.10 33 357 7.1E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19550 a8e5608610223acf80e67645c00416bb 527 Gene3D G3DSA:3.30.70.270 358 526 1.7E-42 T 14-10-2018 BJD94_18775 16c92e52a0071c5efdcd0746e129c3cb 374 SMART SM00421 310 367 4.6E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18775 16c92e52a0071c5efdcd0746e129c3cb 374 Gene3D G3DSA:1.10.10.10 291 371 3.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18775 16c92e52a0071c5efdcd0746e129c3cb 374 SUPERFAMILY SSF46894 295 369 8.16E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_02630 ff3c77efec7a0fadf7b6f826107cc5c3 327 SUPERFAMILY SSF56935 153 322 4.4E-6 T 14-10-2018 BJD94_02630 ff3c77efec7a0fadf7b6f826107cc5c3 327 Pfam PF11383 Protein of unknown function (DUF3187) 22 322 7.9E-116 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 BJD94_14810 c126435a8c9212fa2853fb8320d86b38 247 SUPERFAMILY SSF111364 25 247 1.31E-40 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 BJD94_14810 c126435a8c9212fa2853fb8320d86b38 247 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 33 247 1.0E-27 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BJD94_00030 c126435a8c9212fa2853fb8320d86b38 247 SUPERFAMILY SSF111364 25 247 1.31E-40 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 BJD94_00030 c126435a8c9212fa2853fb8320d86b38 247 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 33 247 1.0E-27 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 BJD94_17120 761038352ce46eaf1c44a5d8650ecb2a 199 Gene3D G3DSA:3.30.1360.60 120 198 1.4E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_17120 761038352ce46eaf1c44a5d8650ecb2a 199 SUPERFAMILY SSF55604 123 195 4.45E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_17120 761038352ce46eaf1c44a5d8650ecb2a 199 Pfam PF00367 phosphotransferase system, EIIB 126 158 2.8E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_17120 761038352ce46eaf1c44a5d8650ecb2a 199 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 136 153 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_17120 761038352ce46eaf1c44a5d8650ecb2a 199 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 99 182 3.9E-18 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BJD94_01575 7b481db3df72a23d14516c65b02c7b90 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-68 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BJD94_01575 7b481db3df72a23d14516c65b02c7b90 149 Pfam PF06610 L-alanine exporter 8 142 8.8E-68 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BJD94_01575 7b481db3df72a23d14516c65b02c7b90 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.389 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 380 1.1E-54 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 SUPERFAMILY SSF52777 165 379 6.23E-56 T 14-10-2018 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 SUPERFAMILY SSF47005 122 164 4.32E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 SUPERFAMILY SSF51230 2 90 8.25E-26 T 14-10-2018 IPR011053 Single hybrid motif BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Gene3D G3DSA:3.30.559.10 165 381 7.2E-51 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Pfam PF00364 Biotin-requiring enzyme 3 75 7.8E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Pfam PF02817 e3 binding domain 129 161 5.6E-8 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Gene3D G3DSA:4.10.320.10 118 164 2.3E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD94_15320 676c124b90bba389c6665f714684ed2b 381 Gene3D G3DSA:2.40.50.100 1 89 1.1E-23 T 14-10-2018 BJD94_15865 462631bc0ebcb48a1c40e1ecff8448c2 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 2.3E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD94_15865 462631bc0ebcb48a1c40e1ecff8448c2 120 SUPERFAMILY SSF55298 1 116 1.49E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_15865 462631bc0ebcb48a1c40e1ecff8448c2 120 Gene3D G3DSA:3.30.1330.40 1 119 3.7E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.081 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 92 132 5.8E-6 T 14-10-2018 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 136 185 3.5E-9 T 14-10-2018 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 SUPERFAMILY SSF54862 37 173 4.45E-31 T 14-10-2018 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 PIRSF PIRSF005784 3 188 1.4E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.7E-86 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.3E-18 T 14-10-2018 BJD94_06140 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:1.10.15.40 38 87 9.2E-8 T 14-10-2018 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 14-10-2018 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 7.9E-75 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF00355 Rieske [2Fe-2S] domain 54 174 1.3E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 SUPERFAMILY SSF50022 30 191 1.14E-43 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_08985 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:2.102.10.10 43 190 1.9E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 Gene3D G3DSA:1.10.10.10 124 237 9.4E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 SUPERFAMILY SSF46894 132 231 2.41E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 Gene3D G3DSA:3.40.50.2300 2 123 1.5E-32 T 14-10-2018 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 SMART SM00862 154 230 7.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 Pfam PF00072 Response regulator receiver domain 9 117 5.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 SUPERFAMILY SSF52172 4 127 1.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.9E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_00940 8c66bf9ed353b286e487806348cd2d2e 239 SMART SM00448 7 117 1.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10245 aa481023ea75bcb0da1aad6abdad729a 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 9.2E-75 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD94_10245 aa481023ea75bcb0da1aad6abdad729a 312 PIRSF PIRSF026649 4 307 5.5E-77 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD94_10245 aa481023ea75bcb0da1aad6abdad729a 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 305 5.7E-129 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BJD94_10245 aa481023ea75bcb0da1aad6abdad729a 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 309 46.524 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 Pfam PF00072 Response regulator receiver domain 186 303 1.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 SMART SM00260 17 158 4.0E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 SMART SM00448 184 305 3.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 Gene3D G3DSA:2.30.30.40 24 152 3.0E-28 T 14-10-2018 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 Gene3D G3DSA:3.40.50.2300 182 311 1.7E-21 T 14-10-2018 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 Pfam PF01584 CheW-like domain 21 160 1.1E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 Gene3D G3DSA:2.40.50.180 39 158 3.0E-28 T 14-10-2018 BJD94_05640 229a2897f3df71bdd88e676793a04003 313 PIRSF PIRSF002867 1 312 1.9E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV BJD94_05640 229a2897f3df71bdd88e676793a04003 313 SUPERFAMILY SSF52172 183 309 7.97E-22 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_05640 229a2897f3df71bdd88e676793a04003 313 SUPERFAMILY SSF50341 16 161 2.62E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_09515 ed48143c9a87bf3ecd03a8452c70a2ab 267 SUPERFAMILY SSF52540 6 242 2.21E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09515 ed48143c9a87bf3ecd03a8452c70a2ab 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_09515 ed48143c9a87bf3ecd03a8452c70a2ab 267 SMART SM00382 31 228 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09515 ed48143c9a87bf3ecd03a8452c70a2ab 267 Gene3D G3DSA:3.40.50.300 4 259 9.3E-65 T 14-10-2018 BJD94_09515 ed48143c9a87bf3ecd03a8452c70a2ab 267 Pfam PF00005 ABC transporter 23 170 1.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_12315 51724e9bb286be95aca670549060c131 181 Pfam PF00929 Exonuclease 9 170 3.0E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_12315 51724e9bb286be95aca670549060c131 181 Gene3D G3DSA:3.30.420.10 1 181 1.5E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_12315 51724e9bb286be95aca670549060c131 181 SUPERFAMILY SSF53098 1 180 1.46E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_12315 51724e9bb286be95aca670549060c131 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.422 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 BJD94_12315 51724e9bb286be95aca670549060c131 181 SMART SM00479 7 180 1.2E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.1150.10 425 594 8.0E-70 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.100.10 595 711 4.6E-45 T 14-10-2018 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF55904 568 708 1.44E-42 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.50.2300 1 129 4.2E-53 T 14-10-2018 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.6E-44 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.1E-29 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.640.10 130 424 1.7E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 PIRSF PIRSF009393 1 711 1.2E-287 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF53383 130 562 7.24E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_01035 26cb5e756dfb885468defd4049d0c820 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-186 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.5E-136 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 3.9E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 SUPERFAMILY SSF53686 3 313 2.36E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 12 306 1.1E-126 T 14-10-2018 BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 Gene3D G3DSA:3.40.50.1100 43 145 1.1E-126 T 14-10-2018 BJD94_07215 1270934fb842d2a3fdfddd6c1b9d292b 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.7E-143 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BJD94_10985 9fe2861db99604035a07f834311e2fda 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.2E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_10985 9fe2861db99604035a07f834311e2fda 473 SUPERFAMILY SSF54862 107 348 1.09E-32 T 14-10-2018 BJD94_10985 9fe2861db99604035a07f834311e2fda 473 Pfam PF12801 4Fe-4S binding domain 97 136 9.6E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_10985 9fe2861db99604035a07f834311e2fda 473 Gene3D G3DSA:2.60.40.10 357 473 5.9E-47 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_10985 9fe2861db99604035a07f834311e2fda 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_10985 9fe2861db99604035a07f834311e2fda 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.5E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain BJD94_10985 9fe2861db99604035a07f834311e2fda 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.2E-172 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 PIRSF PIRSF005917 1 287 7.2E-108 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 SUPERFAMILY SSF53790 13 232 2.88E-85 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 Gene3D G3DSA:3.30.950.10 121 241 5.9E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 Gene3D G3DSA:3.40.1010.10 2 120 3.2E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.359 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 211 5.5E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 3.4E-102 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD94_08940 05507fd27160402f6a2ed5b97c88ddbb 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BJD94_13060 639c4e1617eb23e77f5bf4e03ea624de 216 Pfam PF04612 Type II secretion system (T2SS), protein M 9 75 2.2E-8 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 BJD94_15790 346b0b12ca571c1bf28119ac7b90e5b1 241 Pfam PF03591 AzlC protein 29 167 2.3E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF48008 79 270 2.01E-57 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.636 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF07840 FadR C-terminal domain 72 274 6.6E-68 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF46785 12 74 9.23E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.20.120.530 80 149 1.5E-6 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.20.120.530 153 278 1.7E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 5.6E-115 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 SMART SM00345 12 71 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_01835 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_15295 215677177480f94b9858f1d17784b918 106 Gene3D G3DSA:3.30.70.1240 1 104 1.1E-28 T 14-10-2018 IPR023389 DOPA-like superfamily BJD94_15295 215677177480f94b9858f1d17784b918 106 SUPERFAMILY SSF143410 1 103 3.53E-34 T 14-10-2018 IPR023389 DOPA-like superfamily BJD94_15295 215677177480f94b9858f1d17784b918 106 PIRSF PIRSF028139 1 106 4.6E-43 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase BJD94_15295 215677177480f94b9858f1d17784b918 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 1.0E-27 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase BJD94_01480 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF52540 25 256 1.98E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01480 7e6084bf93312687699a164634854e67 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.417 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD94_01480 7e6084bf93312687699a164634854e67 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.8E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BJD94_01480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_01480 7e6084bf93312687699a164634854e67 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.3E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BJD94_01480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:1.10.8.60 187 260 2.1E-30 T 14-10-2018 BJD94_01480 7e6084bf93312687699a164634854e67 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.3E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD94_01480 7e6084bf93312687699a164634854e67 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 4.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BJD94_01480 7e6084bf93312687699a164634854e67 334 Gene3D G3DSA:3.40.50.300 25 186 3.9E-41 T 14-10-2018 BJD94_01480 7e6084bf93312687699a164634854e67 334 SMART SM00382 56 189 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01480 7e6084bf93312687699a164634854e67 334 SUPERFAMILY SSF46785 262 332 2.39E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 Gene3D G3DSA:1.10.10.10 1 160 6.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 Pfam PF01047 MarR family 50 110 4.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 SMART SM00347 42 145 1.8E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 SUPERFAMILY SSF46785 9 158 2.21E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_21605 50fa8bacd5d6d5f467e284bd6fb0c98c 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_12260 a465c6f9004e9a2b192e26c311e024da 387 Gene3D G3DSA:2.70.70.10 248 386 2.2E-34 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_12260 a465c6f9004e9a2b192e26c311e024da 387 SUPERFAMILY SSF51261 162 385 5.23E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_12260 a465c6f9004e9a2b192e26c311e024da 387 Pfam PF01551 Peptidase family M23 288 381 3.2E-24 T 14-10-2018 IPR016047 Peptidase M23 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 3.5E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 SUPERFAMILY SSF55424 337 451 2.06E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.7E-214 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.0E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 8.4E-65 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 Gene3D G3DSA:3.30.390.30 339 451 7.8E-48 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 Gene3D G3DSA:3.50.50.60 5 315 6.4E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 Gene3D G3DSA:3.50.50.60 144 261 6.4E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PIRSF PIRSF000350 1 445 4.4E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 SUPERFAMILY SSF51905 1 360 3.24E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.1E-28 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-28 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.1E-28 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.1E-28 T 14-10-2018 BJD94_11480 3874f142bda60c0c8617aee5d5e62c83 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.1E-28 T 14-10-2018 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 SUPERFAMILY SSF46689 359 456 9.32E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 SUPERFAMILY SSF52540 146 389 3.73E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Pfam PF00072 Response regulator receiver domain 13 121 4.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Pfam PF02954 Bacterial regulatory protein, Fis family 417 457 8.9E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 SMART SM00382 166 309 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Gene3D G3DSA:1.10.8.60 318 398 6.2E-24 T 14-10-2018 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Gene3D G3DSA:3.40.50.300 137 317 2.0E-65 T 14-10-2018 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 SUPERFAMILY SSF52172 11 190 5.41E-41 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 SMART SM00448 10 121 1.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Gene3D G3DSA:1.10.10.60 412 455 5.4E-8 T 14-10-2018 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Gene3D G3DSA:3.40.50.2300 1 136 1.1E-32 T 14-10-2018 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 Pfam PF00158 Sigma-54 interaction domain 147 312 3.8E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_06115 06f0503626a5f0914d7b32bbe263cc43 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 SUPERFAMILY SSF51905 100 529 3.73E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 Gene3D G3DSA:3.30.70.2700 1 80 2.2E-29 T 14-10-2018 BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 267 3.1E-4 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 PIRSF PIRSF038984 1 535 1.0E-240 T 14-10-2018 IPR028348 FAD dependent protein BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 Gene3D G3DSA:3.50.50.60 85 304 8.4E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_18705 f863c24f287a73d341d1b58bbaeffa67 538 Gene3D G3DSA:3.50.50.60 470 533 8.9E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:2.60.40.1110 28 161 6.9E-27 T 14-10-2018 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:2.60.40.1130 290 407 7.6E-14 T 14-10-2018 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF51445 515 1093 4.23E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF51011 1095 1203 1.08E-25 T 14-10-2018 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Pfam PF11852 Domain of unknown function (DUF3372) 1030 1201 5.7E-49 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF81296 418 521 9.27E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 291 1203 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:3.20.20.80 518 1126 2.6E-200 T 14-10-2018 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:2.60.40.1180 1127 1203 7.9E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF81296 284 408 7.56E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF49452 168 278 1.8E-31 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 418 503 1.6E-13 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 SUPERFAMILY SSF49452 14 161 5.23E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:2.60.40.10 409 517 5.6E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Gene3D G3DSA:2.60.40.1110 166 279 3.1E-27 T 14-10-2018 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Pfam PF03714 Bacterial pullanase-associated domain 48 161 1.2E-12 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 BJD94_18215 6933197ad93f8684f88541a08fbbe5ba 1203 Pfam PF03714 Bacterial pullanase-associated domain 174 278 5.6E-12 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 593 2.0E-15 T 14-10-2018 IPR000014 PAS domain BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:1.20.120.160 1146 1282 2.4E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00387 718 834 1.6E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00073 1155 1252 8.9E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:3.40.50.12740 991 1145 2.7E-40 T 14-10-2018 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF00072 Response regulator receiver domain 855 965 4.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF00072 Response regulator receiver domain 994 1104 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF55874 660 830 1.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:3.30.565.10 670 838 1.5E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:3.30.450.20 467 585 2.4E-17 T 14-10-2018 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF01627 Hpt domain 1166 1250 2.1E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 830 1.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF55781 287 450 5.4E-7 T 14-10-2018 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00086 544 586 0.0068 T 14-10-2018 IPR001610 PAC motif BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF47384 591 672 1.39E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF52172 989 1110 3.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF55785 476 589 2.27E-16 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00091 471 538 9.3E-6 T 14-10-2018 IPR000014 PAS domain BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:3.40.50.2300 850 969 1.4E-25 T 14-10-2018 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF00989 PAS fold 474 582 2.8E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00448 852 965 4.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00448 991 1104 4.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 2.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 Gene3D G3DSA:1.10.287.130 586 669 2.8E-29 T 14-10-2018 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF52172 851 970 6.55E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SUPERFAMILY SSF47226 1087 1228 3.53E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_17310 a01b802af9a608910fb5dcdd55c2c818 1328 SMART SM00388 606 671 9.2E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88946 9 117 2.94E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04542 Sigma-70 region 2 36 102 4.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.10.10 130 197 9.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.1740.10 16 99 6.5E-25 T 14-10-2018 BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88659 130 192 5.05E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 190 1.0E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_14820 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04545 Sigma-70, region 4 142 190 2.9E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88946 9 117 2.94E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04542 Sigma-70 region 2 36 102 4.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.10.10 130 197 9.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.1740.10 16 99 6.5E-25 T 14-10-2018 BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88659 130 192 5.05E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 190 1.0E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_00040 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04545 Sigma-70, region 4 142 190 2.9E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:1.10.10.370 39 109 2.4E-31 T 14-10-2018 BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:3.30.1420.10 2 38 1.6E-13 T 14-10-2018 BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PIRSF PIRSF006223 2 109 1.2E-40 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.9E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Pfam PF04358 DsrC like protein 4 109 2.4E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE BJD94_04445 c95f5f5eb218c0ce3d178e2e406ca5b0 109 SUPERFAMILY SSF69721 2 109 2.75E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 SMART SM00382 47 240 3.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 9.7E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 Gene3D G3DSA:3.40.50.300 7 331 4.2E-98 T 14-10-2018 BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 Pfam PF00005 ABC transporter 39 190 9.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 SUPERFAMILY SSF52540 10 262 4.46E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 2.6E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_06055 4b4a79e001561c41c8de0cfb419469d3 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.633 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 4.5E-146 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.7E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 Gene3D G3DSA:3.90.226.10 3 225 9.5E-85 T 14-10-2018 BJD94_06545 073e60a065e3c4337b5906849ee536f9 288 SUPERFAMILY SSF52096 19 284 1.32E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 SUPERFAMILY SSF51735 3 153 5.18E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 SUPERFAMILY SSF55347 127 296 1.8E-24 T 14-10-2018 BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 Gene3D G3DSA:3.30.360.10 120 319 8.5E-32 T 14-10-2018 BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 130 204 7.9E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 Gene3D G3DSA:3.40.50.720 2 119 4.3E-19 T 14-10-2018 BJD94_10085 abac7fe364829d4bf6e8c4cb33180ae6 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 2.7E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:2.40.50.100 43 76 8.4E-11 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:2.40.30.170 32 42 8.4E-11 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:2.40.50.100 192 236 1.4E-18 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Pfam PF13533 Biotin-lipoyl like 45 89 5.0E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:1.10.287.470 109 191 1.4E-18 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 SUPERFAMILY SSF111369 38 106 3.79E-7 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:2.40.30.170 237 319 1.4E-18 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Pfam PF13437 HlyD family secretion protein 207 282 2.4E-6 T 14-10-2018 BJD94_04350 0efa18c32b501deaf7ba86ab43b95c08 324 Gene3D G3DSA:1.10.287.470 77 108 8.4E-11 T 14-10-2018 BJD94_17595 f1da66d828ef5b928812937dcb984a97 141 SUPERFAMILY SSF55729 14 131 9.05E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_17595 f1da66d828ef5b928812937dcb984a97 141 Pfam PF13673 Acetyltransferase (GNAT) domain 28 130 1.1E-14 T 14-10-2018 IPR000182 GNAT domain BJD94_17595 f1da66d828ef5b928812937dcb984a97 141 Gene3D G3DSA:3.40.630.30 2 132 7.3E-42 T 14-10-2018 BJD94_00685 3c0e441507c605553ba5910991cca358 246 SUPERFAMILY SSF75708 27 245 1.7E-65 T 14-10-2018 BJD94_00685 3c0e441507c605553ba5910991cca358 246 Gene3D G3DSA:1.10.287.500 55 189 6.8E-46 T 14-10-2018 BJD94_00685 3c0e441507c605553ba5910991cca358 246 PIRSF PIRSF002884 13 246 2.4E-95 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD94_00685 3c0e441507c605553ba5910991cca358 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 3.7E-75 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 Gene3D G3DSA:3.30.700.10 9 157 1.9E-7 T 14-10-2018 BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 2.4E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 2.4E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.8E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13110 80a6f55610922d5598dd06fabdae37ed 161 SUPERFAMILY SSF54523 9 126 2.12E-10 T 14-10-2018 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 Gene3D G3DSA:3.40.50.300 1 285 8.1E-88 T 14-10-2018 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 SMART SM00382 348 518 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 SMART SM00382 31 236 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 4.2E-292 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 SUPERFAMILY SSF52540 9 243 4.46E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 Gene3D G3DSA:3.40.50.300 286 555 4.2E-76 T 14-10-2018 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF00005 ABC transporter 22 191 8.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 SUPERFAMILY SSF52540 303 525 2.52E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_08475 73a260c46bb3f59cc3b41d0e7fb899b3 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Gene3D G3DSA:3.40.50.970 317 490 4.1E-66 T 14-10-2018 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.1E-28 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.3E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 4.9E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_07820 89a070517e3eca0f51a062573808a05c 621 SMART SM00861 319 483 5.5E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.163 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 SUPERFAMILY SSF52518 317 504 4.79E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_07820 89a070517e3eca0f51a062573808a05c 621 SUPERFAMILY SSF52922 492 619 1.02E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_07820 89a070517e3eca0f51a062573808a05c 621 SUPERFAMILY SSF52518 9 381 3.69E-76 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_07820 89a070517e3eca0f51a062573808a05c 621 Gene3D G3DSA:3.40.50.920 495 621 4.9E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.8E-62 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 Gene3D G3DSA:2.40.50.100 76 154 2.5E-32 T 14-10-2018 BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 Pfam PF00364 Biotin-requiring enzyme 79 153 5.6E-25 T 14-10-2018 IPR000089 Biotin/lipoyl attachment BJD94_12060 aadfcf8ccf0ce8da2026c180f3ffb324 154 SUPERFAMILY SSF51230 79 154 4.97E-26 T 14-10-2018 IPR011053 Single hybrid motif BJD94_05360 47413d58a4b722dc3db283395c8c50c7 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 7.9E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BJD94_05360 47413d58a4b722dc3db283395c8c50c7 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.946 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BJD94_05360 47413d58a4b722dc3db283395c8c50c7 257 SUPERFAMILY SSF51366 1 256 1.41E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_05360 47413d58a4b722dc3db283395c8c50c7 257 Gene3D G3DSA:3.20.20.70 1 257 1.8E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_05360 47413d58a4b722dc3db283395c8c50c7 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.4E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BJD94_08545 615f287f1959769276a6b639852bdb35 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.934 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 TIGRFAM TIGR00077 lspA: signal peptidase II 6 167 5.2E-50 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 2.9E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_08545 615f287f1959769276a6b639852bdb35 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.9E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 PIRSF PIRSF002599 1 73 3.1E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-40 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 Gene3D G3DSA:2.40.50.140 1 65 1.7E-25 T 14-10-2018 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 SMART SM00357 3 67 1.3E-24 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 40 58 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 PRINTS PR00050 Cold shock protein signature 25 34 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_01300 74516f44e3fec93b3e347ebe97d83173 73 SUPERFAMILY SSF50249 1 67 7.28E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_07450 dcde0322db23149a46c40ce855c60df6 127 PIRSF PIRSF005610 1 121 3.1E-16 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BJD94_07450 dcde0322db23149a46c40ce855c60df6 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 9.6E-38 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Gene3D G3DSA:3.20.20.220 144 525 4.5E-132 T 14-10-2018 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Pfam PF01619 Proline dehydrogenase 197 490 1.3E-93 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Gene3D G3DSA:3.40.309.10 813 1005 3.1E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 SUPERFAMILY SSF51730 190 532 4.71E-115 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 SUPERFAMILY SSF81935 17 188 1.15E-63 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1036 1.6E-250 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 PIRSF PIRSF000197 3 1042 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 SUPERFAMILY SSF53720 557 1037 9.56E-129 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Pfam PF00171 Aldehyde dehydrogenase family 582 1036 1.7E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Gene3D G3DSA:3.40.605.10 554 1036 3.1E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_17740 4d3420fe50e6e55c27b5d513dd4b9b27 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 1.1E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD94_11755 54fe605e2a57bae199d51ece24884004 270 SUPERFAMILY SSF53335 17 252 3.07E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_11755 54fe605e2a57bae199d51ece24884004 270 PIRSF PIRSF028177 3 270 5.4E-66 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 BJD94_11755 54fe605e2a57bae199d51ece24884004 270 Gene3D G3DSA:3.40.50.150 11 256 2.2E-18 T 14-10-2018 BJD94_11755 54fe605e2a57bae199d51ece24884004 270 Pfam PF04072 Leucine carboxyl methyltransferase 72 226 2.8E-7 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 BJD94_01165 b27c66c901200cedbc5016917a9dd226 251 Gene3D G3DSA:3.90.550.10 1 250 8.2E-95 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_01165 b27c66c901200cedbc5016917a9dd226 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 1.9E-115 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BJD94_01165 b27c66c901200cedbc5016917a9dd226 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.472 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BJD94_01165 b27c66c901200cedbc5016917a9dd226 251 Pfam PF02348 Cytidylyltransferase 5 221 1.7E-68 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BJD94_01165 b27c66c901200cedbc5016917a9dd226 251 SUPERFAMILY SSF53448 3 246 2.82E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 SUPERFAMILY SSF63411 1 213 6.78E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 29 52 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Gene3D G3DSA:3.30.830.10 605 864 6.0E-108 T 14-10-2018 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 SUPERFAMILY SSF63411 690 896 6.29E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Gene3D G3DSA:3.30.830.10 1 215 3.4E-83 T 14-10-2018 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Pfam PF00675 Insulinase (Peptidase family M16) 8 145 9.7E-37 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Pfam PF16187 Middle or third domain of peptidase_M16 353 630 4.4E-80 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Gene3D G3DSA:3.30.830.10 226 455 1.6E-72 T 14-10-2018 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 SUPERFAMILY SSF63411 220 455 7.86E-78 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Pfam PF05193 Peptidase M16 inactive domain 635 810 1.6E-9 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Pfam PF05193 Peptidase M16 inactive domain 169 345 9.5E-26 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 SUPERFAMILY SSF63411 457 680 1.61E-59 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_00800 96d8af2d6eb8b1e252bc249012762dda 912 Gene3D G3DSA:3.30.830.10 457 839 6.0E-108 T 14-10-2018 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 4.5E-63 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Gene3D G3DSA:2.40.240.10 348 466 1.0E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Gene3D G3DSA:2.40.240.10 340 547 1.0E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.252 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 6.2E-128 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 SUPERFAMILY SSF50715 340 548 9.94E-79 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Gene3D G3DSA:1.10.1160.10 261 339 6.6E-37 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Gene3D G3DSA:3.40.50.620 30 247 4.6E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.8E-295 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 Gene3D G3DSA:3.90.800.10 101 209 4.6E-106 T 14-10-2018 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 SUPERFAMILY SSF52374 11 337 1.86E-103 T 14-10-2018 BJD94_07060 d936cec8decf4f30e608ce8ab88f18a5 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_13055 20973ab78bd98da1f45062505367ea92 486 SUPERFAMILY SSF53067 55 159 9.58E-10 T 14-10-2018 BJD94_13055 20973ab78bd98da1f45062505367ea92 486 PIRSF PIRSF028153 1 486 1.5E-233 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI BJD94_09495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 SUPERFAMILY SSF52091 2 96 1.41E-15 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_09495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 Pfam PF13466 STAS domain 14 92 6.0E-18 T 14-10-2018 IPR002645 STAS domain BJD94_09495 d2d507b3d1f4fc5edc5f29da536ae3ff 105 Gene3D G3DSA:3.30.750.24 10 102 1.0E-11 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_00090 d229d5d565b7955a5cf41e480b17f761 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.946 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BJD94_00090 d229d5d565b7955a5cf41e480b17f761 210 PIRSF PIRSF006102 3 210 4.0E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_00090 d229d5d565b7955a5cf41e480b17f761 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.7E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_00090 d229d5d565b7955a5cf41e480b17f761 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 4.0E-110 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 BJD94_07120 411f88da1fa04825d7800e7d7afc2687 290 Gene3D G3DSA:1.10.10.10 5 107 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07120 411f88da1fa04825d7800e7d7afc2687 290 SMART SM00862 30 107 7.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_07120 411f88da1fa04825d7800e7d7afc2687 290 SUPERFAMILY SSF46894 7 109 1.67E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_07120 411f88da1fa04825d7800e7d7afc2687 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82693 40 134 6.28E-25 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82714 704 788 5.62E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.6E-276 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82866 794 1011 2.49E-49 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82714 183 266 4.45E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82693 554 657 9.42E-17 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82866 290 489 4.97E-46 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 SUPERFAMILY SSF82693 139 324 3.92E-19 T 14-10-2018 BJD94_06475 6964ad4a5af8ab6e28dca965ee7bd62e 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 BJD94_00305 d290e77536bf7e2d92b62ded417706ea 207 Pfam PF01351 Ribonuclease HII 22 198 7.2E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain BJD94_00305 d290e77536bf7e2d92b62ded417706ea 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.964 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 BJD94_00305 d290e77536bf7e2d92b62ded417706ea 207 Gene3D G3DSA:3.30.420.10 4 207 5.1E-80 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_00305 d290e77536bf7e2d92b62ded417706ea 207 SUPERFAMILY SSF53098 14 204 1.82E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_07410 986a0cae24992ddd1709b721fe15a203 193 SMART SM00463 92 175 1.0E-12 T 14-10-2018 IPR002625 Smr domain BJD94_07410 986a0cae24992ddd1709b721fe15a203 193 SUPERFAMILY SSF160443 93 174 3.92E-13 T 14-10-2018 IPR036063 Smr domain superfamily BJD94_07410 986a0cae24992ddd1709b721fe15a203 193 Pfam PF01713 Smr domain 95 174 5.9E-18 T 14-10-2018 IPR002625 Smr domain BJD94_07410 986a0cae24992ddd1709b721fe15a203 193 Gene3D G3DSA:3.30.1370.110 47 181 1.8E-40 T 14-10-2018 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 SUPERFAMILY SSF48452 311 455 4.09E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 Gene3D G3DSA:3.30.2010.10 76 148 1.0E-6 T 14-10-2018 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 Pfam PF01435 Peptidase family M48 70 252 5.1E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 Pfam PF14559 Tetratricopeptide repeat 352 416 2.2E-10 T 14-10-2018 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 SMART SM00028 426 459 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 SMART SM00028 307 340 56.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 SMART SM00028 341 374 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 Gene3D G3DSA:1.25.40.10 264 469 4.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_00455 a8758ed81a242c294ea5a61ee075cd87 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 483 42.049 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 BJD94_06270 0b9af86cf29a9c917a84bf791eb6dc05 606 SUPERFAMILY SSF53649 256 586 3.63E-51 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_06270 0b9af86cf29a9c917a84bf791eb6dc05 606 Gene3D G3DSA:3.40.720.10 248 529 2.7E-37 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_06270 0b9af86cf29a9c917a84bf791eb6dc05 606 Pfam PF00884 Sulfatase 273 519 8.2E-23 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_06270 0b9af86cf29a9c917a84bf791eb6dc05 606 PIRSF PIRSF004950 6 604 4.7E-250 T 14-10-2018 IPR012159 Inner membrane protein YejM BJD94_06270 0b9af86cf29a9c917a84bf791eb6dc05 606 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.9E-99 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 SMART SM00387 474 567 4.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 129 7.3E-23 T 14-10-2018 IPR029095 NarX-like, N-terminal BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 SUPERFAMILY SSF55874 445 561 1.83E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Pfam PF00672 HAMP domain 176 223 2.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Gene3D G3DSA:3.30.565.10 434 567 1.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 PIRSF PIRSF003167 2 311 2.3E-76 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 PIRSF PIRSF003167 298 570 5.4E-102 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Gene3D G3DSA:1.20.120.960 40 148 1.9E-12 T 14-10-2018 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Gene3D G3DSA:1.10.287.130 173 287 1.9E-7 T 14-10-2018 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 562 8.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 SUPERFAMILY SSF158472 176 225 8.63E-8 T 14-10-2018 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 SMART SM00304 176 228 1.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_16070 6be72243f31ee6a33f100f4ea0fd8248 571 Pfam PF07730 Histidine kinase 365 433 6.1E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD94_12005 2e0668fddc2a0d27aad85433d76a4076 362 Pfam PF01595 Domain of unknown function DUF21 9 177 1.6E-28 T 14-10-2018 IPR002550 CNNM, transmembrane domain BJD94_12005 2e0668fddc2a0d27aad85433d76a4076 362 SUPERFAMILY SSF54631 181 315 5.18E-25 T 14-10-2018 BJD94_12005 2e0668fddc2a0d27aad85433d76a4076 362 Gene3D G3DSA:3.10.580.10 186 315 1.4E-39 T 14-10-2018 BJD94_12005 2e0668fddc2a0d27aad85433d76a4076 362 Pfam PF00571 CBS domain 262 313 4.3E-6 T 14-10-2018 IPR000644 CBS domain BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Gene3D G3DSA:3.30.559.10 19 192 1.4E-9 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 SUPERFAMILY SSF52777 739 997 1.56E-29 T 14-10-2018 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Gene3D G3DSA:3.30.559.30 735 986 4.2E-64 T 14-10-2018 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Gene3D G3DSA:3.30.559.10 554 934 4.2E-64 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Gene3D G3DSA:1.10.1200.10 441 526 4.9E-15 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 SUPERFAMILY SSF52777 552 751 1.04E-33 T 14-10-2018 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 SUPERFAMILY SSF52777 29 176 3.78E-13 T 14-10-2018 BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Pfam PF00550 Phosphopantetheine attachment site 469 520 1.1E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 Pfam PF00668 Condensation domain 551 999 2.0E-43 T 14-10-2018 IPR001242 Condensation domain BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 ProSitePatterns PS00012 Phosphopantetheine attachment site. 481 496 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site BJD94_16615 4d5f0be005323926c8b6fbfc71230f90 1017 SUPERFAMILY SSF47336 452 520 1.96E-11 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 2.2E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 SUPERFAMILY SSF53927 1 147 2.51E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 SUPERFAMILY SSF53927 152 290 8.17E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 Gene3D G3DSA:3.40.140.10 29 179 7.3E-44 T 14-10-2018 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 Gene3D G3DSA:3.40.140.10 180 295 1.4E-29 T 14-10-2018 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 2.6E-101 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 51.227 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 2.0E-44 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 BJD94_02550 a93d3b3d1325b9d62cace29910646940 295 PIRSF PIRSF006334 14 295 3.4E-113 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.8E-7 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.8E-7 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 9.8E-7 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.7E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.8E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 14-10-2018 BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 SUPERFAMILY SSF52317 1 191 9.7E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_12480 90981a9633fc20ce312b6da7fb8a4768 192 Gene3D G3DSA:3.40.50.880 1 192 5.3E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 7.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 7.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 Pfam PF12833 Helix-turn-helix domain 207 286 1.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 SUPERFAMILY SSF51215 28 171 1.57E-14 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 SUPERFAMILY SSF46689 239 287 4.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 Gene3D G3DSA:2.60.120.10 4 91 9.8E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 SMART SM00342 201 285 1.5E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 Pfam PF07883 Cupin domain 28 75 7.5E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BJD94_18575 edac7099c3235b15810376501d8fc3ca 289 Gene3D G3DSA:1.10.10.60 167 289 1.8E-27 T 14-10-2018 BJD94_09625 8987a48f157589253cf91806c2286f36 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 1.2E-20 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 BJD94_05875 82af8bb23e101487116f61dba239d92f 407 SMART SM00852 1 167 1.3E-25 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_05875 82af8bb23e101487116f61dba239d92f 407 Gene3D G3DSA:3.40.980.10 1 167 4.4E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_05875 82af8bb23e101487116f61dba239d92f 407 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 349 5.7E-79 T 14-10-2018 IPR008135 Competence-induced protein CinA BJD94_05875 82af8bb23e101487116f61dba239d92f 407 SUPERFAMILY SSF53218 1 200 9.95E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_05875 82af8bb23e101487116f61dba239d92f 407 Pfam PF00994 Probable molybdopterin binding domain 1 166 4.5E-30 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_05875 82af8bb23e101487116f61dba239d92f 407 PIRSF PIRSF006728 1 387 6.3E-106 T 14-10-2018 IPR008135 Competence-induced protein CinA BJD94_05875 82af8bb23e101487116f61dba239d92f 407 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 407 100.105 T 14-10-2018 IPR008135 Competence-induced protein CinA BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.956 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 SUPERFAMILY SSF50447 1 208 1.94E-83 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.8E-94 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 14-10-2018 BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 Pfam PF00297 Ribosomal protein L3 49 182 2.8E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09880 2b8b652a41761918775f80b37af0b5bf 209 Gene3D G3DSA:2.40.50.620 32 96 6.0E-15 T 14-10-2018 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SMART SM00959 5 47 1.3E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Gene3D G3DSA:3.40.50.300 130 417 3.6E-134 T 14-10-2018 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Gene3D G3DSA:1.10.720.10 1 47 5.6E-23 T 14-10-2018 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SMART SM00382 170 355 9.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.873 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SUPERFAMILY SSF52540 90 371 1.6E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.0E-220 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 14-10-2018 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SUPERFAMILY SSF68912 1 46 2.24E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SUPERFAMILY SSF50249 48 125 7.42E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 7.7E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BJD94_10725 2f600624919bce6d2c4be27cfbe26250 419 SMART SM00357 52 118 1.7E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 SUPERFAMILY SSF53597 149 361 1.34E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 Pfam PF01872 RibD C-terminal domain 152 357 1.5E-46 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 SUPERFAMILY SSF53927 8 150 1.32E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 Gene3D G3DSA:3.40.430.10 142 367 2.0E-64 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 7.2E-128 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 8.0E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 9.2E-56 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 PIRSF PIRSF006769 3 366 1.7E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BJD94_07855 f6f810d9ad46a12862a79d60192058a4 368 Gene3D G3DSA:3.40.140.10 4 140 8.8E-46 T 14-10-2018 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 Gene3D G3DSA:3.40.50.620 5 333 3.2E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 1.4E-76 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 SUPERFAMILY SSF52374 5 334 4.42E-91 T 14-10-2018 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.9E-107 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.536 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BJD94_12465 b6f461aaf2ce83d165aa909a76afe83b 338 Gene3D G3DSA:1.10.240.10 191 304 3.2E-139 T 14-10-2018 BJD94_08665 88d1f4eab0fcfead11cd352f37c4e128 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 169 2.7E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BJD94_08665 88d1f4eab0fcfead11cd352f37c4e128 172 PIRSF PIRSF038996 1 172 3.2E-57 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BJD94_08665 88d1f4eab0fcfead11cd352f37c4e128 172 Gene3D G3DSA:3.40.50.360 1 172 2.4E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_08665 88d1f4eab0fcfead11cd352f37c4e128 172 Pfam PF00258 Flavodoxin 5 160 1.3E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD94_08665 88d1f4eab0fcfead11cd352f37c4e128 172 SUPERFAMILY SSF52218 1 169 1.01E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 4.7E-101 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 SUPERFAMILY SSF51735 9 247 8.2E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 Gene3D G3DSA:3.40.50.720 1 248 1.6E-91 T 14-10-2018 BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 6.2E-6 T 14-10-2018 BJD94_05715 1c63044d74d46ac9635bcc83a4858e5c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 3.3E-68 T 14-10-2018 BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 Gene3D G3DSA:1.25.40.650 149 254 2.2E-15 T 14-10-2018 BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 Pfam PF04348 LppC putative lipoprotein 40 601 5.8E-156 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 Gene3D G3DSA:3.40.50.2300 369 597 4.1E-61 T 14-10-2018 BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 Gene3D G3DSA:1.25.40.10 24 146 1.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 Gene3D G3DSA:3.40.50.2300 261 596 4.1E-61 T 14-10-2018 BJD94_08945 8fdeab7823ac1266836dd4589fba0d7f 603 SUPERFAMILY SSF53822 258 600 7.06E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 Gene3D G3DSA:2.40.30.170 61 307 3.2E-50 T 14-10-2018 BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 Gene3D G3DSA:2.40.50.100 70 215 3.2E-50 T 14-10-2018 BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 373 8.3E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 Gene3D G3DSA:1.10.287.470 107 181 3.2E-50 T 14-10-2018 BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 281 1.6E-9 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 Gene3D G3DSA:2.40.420.20 308 372 3.2E-50 T 14-10-2018 BJD94_17070 f0c91434e4be5c2da173ee6ff2b5b9db 386 SUPERFAMILY SSF111369 62 283 1.7E-22 T 14-10-2018 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 SUPERFAMILY SSF57829 3 54 7.94E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.6E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 Pfam PF00471 Ribosomal protein L33 8 54 3.4E-17 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_10215 e92989b1f1b25736b8b56be82d15c652 56 Gene3D G3DSA:2.20.28.120 1 56 4.9E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 SUPERFAMILY SSF48498 80 192 4.08E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 Gene3D G3DSA:1.10.357.10 1 193 3.7E-61 T 14-10-2018 BJD94_15485 5559b1213eeccffdc65d9a4a6850390a 194 SUPERFAMILY SSF46689 2 75 1.64E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19960 00d6f03d979d620efa17285f569ac484 92 Gene3D G3DSA:3.10.50.40 2 91 1.7E-31 T 14-10-2018 BJD94_19960 00d6f03d979d620efa17285f569ac484 92 SUPERFAMILY SSF54534 7 90 4.25E-24 T 14-10-2018 BJD94_19960 00d6f03d979d620efa17285f569ac484 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 5.7E-19 T 14-10-2018 BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 SUPERFAMILY SSF46785 6 114 4.38E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 8.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 Gene3D G3DSA:3.40.190.290 93 290 9.2E-68 T 14-10-2018 BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 SUPERFAMILY SSF53850 92 291 8.69E-47 T 14-10-2018 BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 Gene3D G3DSA:1.10.10.10 5 91 4.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07935 f5345c68ad21d63c20c7dc4adb63f882 294 Pfam PF03466 LysR substrate binding domain 92 290 3.8E-45 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_10160 0a299d0bc98be810d3339f35087a2cc1 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 5.9E-99 T 14-10-2018 IPR016040 NAD(P)-binding domain BJD94_10160 0a299d0bc98be810d3339f35087a2cc1 354 SUPERFAMILY SSF51735 1 337 1.02E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10160 0a299d0bc98be810d3339f35087a2cc1 354 Gene3D G3DSA:3.90.25.10 201 334 3.6E-137 T 14-10-2018 BJD94_10160 0a299d0bc98be810d3339f35087a2cc1 354 Gene3D G3DSA:3.40.50.720 2 325 3.6E-137 T 14-10-2018 BJD94_10160 0a299d0bc98be810d3339f35087a2cc1 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 2.0E-158 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BJD94_18930 2fa5447db6eee7fda73b9d70de2f707a 404 Pfam PF00764 Arginosuccinate synthase 24 371 5.1E-55 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_18930 2fa5447db6eee7fda73b9d70de2f707a 404 Gene3D G3DSA:3.90.1260.10 76 361 6.3E-91 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD94_18930 2fa5447db6eee7fda73b9d70de2f707a 404 Gene3D G3DSA:3.40.50.620 20 182 6.3E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_18930 2fa5447db6eee7fda73b9d70de2f707a 404 SUPERFAMILY SSF52402 18 172 7.5E-25 T 14-10-2018 BJD94_18930 2fa5447db6eee7fda73b9d70de2f707a 404 SUPERFAMILY SSF69864 185 379 1.14E-45 T 14-10-2018 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 Pfam PF00850 Histone deacetylase domain 44 289 2.1E-45 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 Gene3D G3DSA:3.40.800.20 2 304 2.3E-61 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD94_06310 4a3da5ee72d275d976073dc77c13e55a 312 SUPERFAMILY SSF52768 2 296 2.93E-79 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily BJD94_10185 dc378ccd400ce4bc2eb61fd667229d8f 266 SUPERFAMILY SSF53448 8 150 6.62E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10185 dc378ccd400ce4bc2eb61fd667229d8f 266 Pfam PF00535 Glycosyl transferase family 2 15 116 2.8E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD94_10185 dc378ccd400ce4bc2eb61fd667229d8f 266 Gene3D G3DSA:3.90.550.10 1 217 6.7E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 Pfam PF08220 DeoR-like helix-turn-helix domain 24 77 5.8E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 SUPERFAMILY SSF46785 23 93 7.76E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 SUPERFAMILY SSF100950 92 252 4.54E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 Gene3D G3DSA:1.10.10.10 7 86 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 SMART SM01134 90 252 4.0E-71 T 14-10-2018 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 SMART SM00420 24 76 4.1E-27 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 Gene3D G3DSA:3.30.750.70 87 153 5.4E-8 T 14-10-2018 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 Pfam PF00455 DeoR C terminal sensor domain 92 250 8.9E-54 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 56 4.3E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 56 74 4.3E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_14705 6fb492eceb091f2e9a47413a2ca0cd5c 273 ProSitePatterns PS00894 DeoR-type HTH domain signature. 24 58 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 Gene3D G3DSA:1.10.1020.10 57 156 1.5E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 3.6E-69 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 Gene3D G3DSA:3.40.50.150 7 239 1.5E-83 T 14-10-2018 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 SUPERFAMILY SSF53335 5 268 1.66E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 PIRSF PIRSF000398 1 275 1.3E-71 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 5.7E-94 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_12820 c40bd09e2c6f091f37801f77127b3455 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD94_08145 4f7503e26d9ca96995f68816cba547e2 76 Gene3D G3DSA:2.10.290.10 2 71 2.6E-27 T 14-10-2018 IPR029037 YfgJ-like BJD94_08145 4f7503e26d9ca96995f68816cba547e2 76 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 4.0E-31 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 BJD94_08145 4f7503e26d9ca96995f68816cba547e2 76 Pfam PF07191 zinc-ribbons 5 68 1.1E-27 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 BJD94_08145 4f7503e26d9ca96995f68816cba547e2 76 SUPERFAMILY SSF161187 3 70 5.49E-27 T 14-10-2018 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 Gene3D G3DSA:1.10.1060.10 107 244 2.9E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 SUPERFAMILY SSF54292 5 106 1.7E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.2E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 SUPERFAMILY SSF46548 107 226 1.66E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 7.6E-94 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.5E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD94_12230 3453d41e7c26977406a3304668e87bc5 246 Gene3D G3DSA:3.10.20.30 4 106 6.8E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01380 SIS domain 124 252 2.0E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 14-10-2018 BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:3.40.50.10490 94 277 5.1E-40 T 14-10-2018 BJD94_04960 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 Pfam PF05175 Methyltransferase small domain 135 217 2.4E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.635 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.3E-136 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 3.6E-95 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 SUPERFAMILY SSF53335 16 293 1.64E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 Gene3D G3DSA:3.40.50.150 106 279 2.1E-45 T 14-10-2018 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 Gene3D G3DSA:1.10.8.10 17 105 2.0E-5 T 14-10-2018 BJD94_00815 a0425fa3f215ec25016d4392dc36801b 310 PIRSF PIRSF037167 2 307 4.3E-148 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 0.0011 T 14-10-2018 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 Gene3D G3DSA:3.40.50.720 1 245 1.6E-76 T 14-10-2018 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 6.9E-117 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 6.4E-59 T 14-10-2018 BJD94_16120 afb15242eb4674d732531d1e7f945315 246 SUPERFAMILY SSF51735 2 245 1.36E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_16120 afb15242eb4674d732531d1e7f945315 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 314 1.2E-41 T 14-10-2018 IPR000160 GGDEF domain BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 Gene3D G3DSA:3.30.70.270 151 320 8.2E-54 T 14-10-2018 BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 SUPERFAMILY SSF55073 162 318 4.0E-48 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 SMART SM00267 146 318 2.0E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 Gene3D G3DSA:3.30.450.20 12 143 7.6E-30 T 14-10-2018 BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 SUPERFAMILY SSF55785 14 95 6.98E-9 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_03770 edc6b0e5ea77ae9cf57f45771d70aa3f 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 4.4E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_16880 1e4b3b413274e108d8394be775a4cb1a 120 Gene3D G3DSA:3.40.190.10 6 75 2.5E-6 T 14-10-2018 BJD94_16880 1e4b3b413274e108d8394be775a4cb1a 120 Gene3D G3DSA:3.40.190.10 76 115 2.5E-6 T 14-10-2018 BJD94_16880 1e4b3b413274e108d8394be775a4cb1a 120 SUPERFAMILY SSF53850 4 116 5.67E-11 T 14-10-2018 BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 SMART SM00382 32 238 0.0016 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.5E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 SUPERFAMILY SSF52540 4 269 3.92E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 Gene3D G3DSA:3.40.50.300 2 330 2.5E-72 T 14-10-2018 BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 Pfam PF00005 ABC transporter 24 187 6.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_05215 81f9f1fffed69dcaf6d4309eb61df2d5 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.7E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.1E-113 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.2E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.058 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 PIRSF PIRSF000388 1 264 2.5E-100 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 Gene3D G3DSA:3.20.20.60 1 263 1.5E-104 T 14-10-2018 BJD94_14055 c5ba7ea63f83d27aa50d7c8507693898 264 SUPERFAMILY SSF51621 3 262 1.02E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 Gene3D G3DSA:1.10.287.950 251 581 1.2E-64 T 14-10-2018 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 SUPERFAMILY SSF58104 272 580 1.44E-67 T 14-10-2018 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 SMART SM00283 319 580 1.2E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 SMART SM00304 251 304 0.0037 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 SMART SM00304 307 357 65.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 444 1.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 1.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 1.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17305 52230ea567c9d37fbf80525a254d3b82 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 387 547 1.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_13530 d10721b25eafc8eef73f1d5649d96d10 168 Pfam PF17283 SprT-like zinc ribbon domain 123 163 7.9E-10 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain BJD94_13530 d10721b25eafc8eef73f1d5649d96d10 168 Hamap MF_00746 Protein SprT [sprT]. 10 163 43.266 T 14-10-2018 IPR023483 Uncharacterised protein family SprT BJD94_13530 d10721b25eafc8eef73f1d5649d96d10 168 SMART SM00731 14 163 2.8E-56 T 14-10-2018 IPR006640 SprT-like BJD94_13530 d10721b25eafc8eef73f1d5649d96d10 168 Pfam PF10263 SprT-like family 17 117 4.0E-18 T 14-10-2018 IPR006640 SprT-like BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Gene3D G3DSA:2.40.340.10 332 401 1.9E-145 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.6E-33 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Pfam PF00994 Probable molybdopterin binding domain 187 320 2.2E-25 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 3.4E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Gene3D G3DSA:2.170.190.11 53 145 1.9E-145 T 14-10-2018 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 SUPERFAMILY SSF53218 181 326 1.15E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Gene3D G3DSA:3.40.980.10 179 331 1.9E-145 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 SUPERFAMILY SSF63867 332 410 1.03E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 SMART SM00852 184 321 2.9E-41 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 SUPERFAMILY SSF63882 7 180 2.35E-57 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.5E-47 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_15665 884e98e5ffa08fc48db1ccc6f8b620f9 411 Gene3D G3DSA:3.90.105.10 31 178 1.9E-145 T 14-10-2018 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 SMART SM00448 5 118 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 Gene3D G3DSA:3.40.50.180 149 344 5.6E-69 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 Gene3D G3DSA:3.40.50.2300 2 134 1.1E-30 T 14-10-2018 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 Pfam PF01339 CheB methylesterase 160 338 1.9E-57 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 Pfam PF00072 Response regulator receiver domain 7 110 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 PIRSF PIRSF000876 2 344 3.0E-131 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 39.264 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 SUPERFAMILY SSF52172 3 110 1.57E-27 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17910 934a2c8760af5eaa8c2ce14568bdbbef 344 SUPERFAMILY SSF52738 155 343 4.84E-67 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_04050 c65a33ca6076cd125b18c852cb061a74 405 Gene3D G3DSA:1.10.3210.10 119 300 1.3E-9 T 14-10-2018 BJD94_04050 c65a33ca6076cd125b18c852cb061a74 405 Pfam PF08668 HDOD domain 137 280 4.4E-7 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_04050 c65a33ca6076cd125b18c852cb061a74 405 SUPERFAMILY SSF109604 132 278 4.39E-9 T 14-10-2018 BJD94_21865 718b71e2a428586d67c18efb1707c653 244 Gene3D G3DSA:3.30.450.40 80 240 1.4E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_21865 718b71e2a428586d67c18efb1707c653 244 Pfam PF09339 IclR helix-turn-helix domain 13 60 1.1E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD94_21865 718b71e2a428586d67c18efb1707c653 244 Gene3D G3DSA:1.10.10.10 9 79 4.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21865 718b71e2a428586d67c18efb1707c653 244 SUPERFAMILY SSF46785 6 65 7.7E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21865 718b71e2a428586d67c18efb1707c653 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 1.6E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BJD94_21865 718b71e2a428586d67c18efb1707c653 244 SUPERFAMILY SSF55781 80 239 4.51E-32 T 14-10-2018 BJD94_14900 718b71e2a428586d67c18efb1707c653 244 Gene3D G3DSA:3.30.450.40 80 240 1.4E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_14900 718b71e2a428586d67c18efb1707c653 244 Pfam PF09339 IclR helix-turn-helix domain 13 60 1.1E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD94_14900 718b71e2a428586d67c18efb1707c653 244 Gene3D G3DSA:1.10.10.10 9 79 4.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14900 718b71e2a428586d67c18efb1707c653 244 SUPERFAMILY SSF46785 6 65 7.7E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_14900 718b71e2a428586d67c18efb1707c653 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 1.6E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal BJD94_14900 718b71e2a428586d67c18efb1707c653 244 SUPERFAMILY SSF55781 80 239 4.51E-32 T 14-10-2018 BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 4.0E-67 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.988 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 Gene3D G3DSA:1.10.1220.10 98 149 3.4E-24 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 4.2E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 Gene3D G3DSA:1.20.1270.380 1 89 1.3E-47 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily BJD94_04065 76c1f3ecc4b15cabc3f25107f910ce8d 149 Pfam PF06303 MatP N-terminal domain 2 85 6.5E-42 T 14-10-2018 IPR035087 MatP, N-terminal BJD94_10895 6aaaa8a2495e38bd195611c9dc1a6108 87 Gene3D G3DSA:3.30.160.140 1 87 1.8E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily BJD94_10895 6aaaa8a2495e38bd195611c9dc1a6108 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 3.3E-25 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 BJD94_10895 6aaaa8a2495e38bd195611c9dc1a6108 87 SUPERFAMILY SSF160272 1 86 1.31E-28 T 14-10-2018 IPR036692 Shew3726-like superfamily BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 199 1.9E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 Gene3D G3DSA:3.40.30.10 1 77 7.5E-23 T 14-10-2018 BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 SUPERFAMILY SSF47616 72 204 5.01E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 SUPERFAMILY SSF52833 1 88 3.47E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 7.1E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_15205 a0f9ea1a89aa4bbfbdb61f19dd037459 205 Gene3D G3DSA:1.20.1050.10 83 199 3.3E-31 T 14-10-2018 BJD94_12165 fd46f74a26ab0b02f85ade699a2dfc8b 177 PIRSF PIRSF034445 2 166 5.5E-21 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 BJD94_12165 fd46f74a26ab0b02f85ade699a2dfc8b 177 Pfam PF07813 LTXXQ motif family protein 46 156 2.1E-24 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 BJD94_12165 fd46f74a26ab0b02f85ade699a2dfc8b 177 Gene3D G3DSA:1.20.120.1490 44 161 1.3E-27 T 14-10-2018 BJD94_19765 610f48bfab588c06e0ed3d58854ffcb0 346 Pfam PF00534 Glycosyl transferases group 1 173 319 1.0E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_19765 610f48bfab588c06e0ed3d58854ffcb0 346 Pfam PF13439 Glycosyltransferase Family 4 21 158 1.5E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_19765 610f48bfab588c06e0ed3d58854ffcb0 346 Gene3D G3DSA:3.40.50.2000 155 326 5.1E-59 T 14-10-2018 BJD94_19765 610f48bfab588c06e0ed3d58854ffcb0 346 Gene3D G3DSA:3.40.50.2000 14 335 5.1E-59 T 14-10-2018 BJD94_19765 610f48bfab588c06e0ed3d58854ffcb0 346 SUPERFAMILY SSF53756 7 344 9.42E-69 T 14-10-2018 BJD94_00565 c478bbe12d54992067064800c734d6f8 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 7.7E-24 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD94_00565 c478bbe12d54992067064800c734d6f8 136 Gene3D G3DSA:1.20.120.340 2 126 8.0E-39 T 14-10-2018 BJD94_00565 c478bbe12d54992067064800c734d6f8 136 PIRSF PIRSF039090 1 132 2.0E-42 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD94_00565 c478bbe12d54992067064800c734d6f8 136 SUPERFAMILY SSF101116 6 127 2.62E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BJD94_00565 c478bbe12d54992067064800c734d6f8 136 Pfam PF02561 Flagellar protein FliS 6 122 8.5E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 31 310 1.3E-108 T 14-10-2018 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 131 315 1.3E-108 T 14-10-2018 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 5.0E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 SUPERFAMILY SSF53850 26 330 5.65E-86 T 14-10-2018 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PIRSF PIRSF019574 1 343 3.8E-109 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03945 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Pfam PF01588 Putative tRNA binding domain 595 687 4.4E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:3.40.50.620 14 389 1.2E-159 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF50249 588 689 1.13E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:2.20.28.20 147 181 1.2E-159 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 689 4.1E-48 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 9.7E-199 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:1.10.730.10 394 531 2.2E-34 T 14-10-2018 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF52374 10 392 1.34E-98 T 14-10-2018 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF57770 147 181 6.02E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Pfam PF09334 tRNA synthetases class I (M) 14 401 5.7E-164 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 SUPERFAMILY SSF47323 391 603 6.35E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Gene3D G3DSA:2.40.50.140 579 690 1.9E-36 T 14-10-2018 BJD94_05790 e8b6aa5238759fa4032f9b35f5bd0aec 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.289 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_14925 d1402ea50b123be4bc98a2626cf48ecf 225 PIRSF PIRSF028234 1 225 4.6E-118 T 14-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 BJD94_14925 d1402ea50b123be4bc98a2626cf48ecf 225 Pfam PF12847 Methyltransferase domain 3 159 3.7E-28 T 14-10-2018 BJD94_14925 d1402ea50b123be4bc98a2626cf48ecf 225 Gene3D G3DSA:3.40.50.150 2 165 2.4E-47 T 14-10-2018 BJD94_14925 d1402ea50b123be4bc98a2626cf48ecf 225 SUPERFAMILY SSF53335 9 100 6.58E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 225 564 4.5E-140 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 121 204 1.4E-35 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 122 204 3.6E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 4.5E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 Gene3D G3DSA:3.40.50.2300 1 103 9.3E-26 T 14-10-2018 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 SUPERFAMILY SSF52794 119 220 7.85E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 Pfam PF02378 Phosphotransferase system, EIIC 245 508 2.0E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 Gene3D G3DSA:3.40.50.2300 109 220 7.3E-40 T 14-10-2018 BJD94_21175 e643e17a6201f77abb6685586a6b7b79 575 SUPERFAMILY SSF52794 2 102 6.63E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_13240 9a877edfcd11b3d7e00c07561c9f3ad8 390 Pfam PF05987 Bacterial protein of unknown function (DUF898) 8 382 2.1E-95 T 14-10-2018 IPR010295 Protein of unknown function DUF898 BJD94_02450 98fc904c41f8d39644a4a14f1d03bdcc 276 Gene3D G3DSA:1.10.3210.10 2 274 3.5E-69 T 14-10-2018 BJD94_02450 98fc904c41f8d39644a4a14f1d03bdcc 276 SUPERFAMILY SSF109604 6 229 1.88E-56 T 14-10-2018 BJD94_02450 98fc904c41f8d39644a4a14f1d03bdcc 276 Pfam PF08668 HDOD domain 13 204 2.7E-55 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Gene3D G3DSA:3.40.50.220 21 116 1.3E-12 T 14-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 PIRSF PIRSF009393 1 726 9.6E-287 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Gene3D G3DSA:3.90.100.10 608 726 6.6E-41 T 14-10-2018 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 14-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 4.5E-13 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Gene3D G3DSA:3.90.1150.10 429 607 8.1E-68 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 2.6E-187 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 SUPERFAMILY SSF53383 117 574 1.19E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_18230 f111c3862ca83539149cddc99f07f981 726 Gene3D G3DSA:3.40.640.10 117 427 9.5E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_18230 f111c3862ca83539149cddc99f07f981 726 SUPERFAMILY SSF52172 1 116 2.68E-24 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 231 1.1E-80 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 SUPERFAMILY SSF53448 8 231 8.35E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 Gene3D G3DSA:3.90.550.10 3 235 4.8E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 43.889 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD94_13765 a7f56e87e66f1125bd5821412feb039e 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 4.0E-77 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 5.8E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 5.8E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 235 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 SMART SM00342 155 239 2.4E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 Gene3D G3DSA:1.10.10.60 188 241 5.2E-20 T 14-10-2018 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 SUPERFAMILY SSF46689 140 188 8.33E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 SUPERFAMILY SSF46689 192 239 1.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 Gene3D G3DSA:1.10.10.60 135 187 6.1E-10 T 14-10-2018 BJD94_14510 8070c97e4d5e35d7417926c78ad782c5 242 Pfam PF12833 Helix-turn-helix domain 165 239 8.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 6.4E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.40.50.720 155 288 1.2E-116 T 14-10-2018 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF50129 3 175 1.13E-51 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 3.3E-180 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF51735 143 307 8.02E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.90.180.10 22 330 1.2E-116 T 14-10-2018 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.335 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 SMART SM00829 14 340 6.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_19365 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.0E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 2.0E-142 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 SUPERFAMILY SSF110738 1 374 7.59E-125 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 Gene3D G3DSA:3.90.1510.10 42 276 2.0E-131 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 Pfam PF02595 Glycerate kinase family 3 372 3.8E-136 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 PIRSF PIRSF006078 1 375 2.7E-131 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_18725 d4b0a5bdac1e0d8fe5b3ff987a48736d 386 Gene3D G3DSA:3.40.50.10350 1 361 2.0E-131 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 Pfam PF00199 Catalase 25 390 5.7E-166 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 SUPERFAMILY SSF56634 21 508 3.27E-188 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 101 119 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 38 61 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 122 139 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 336 362 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 141 159 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PRINTS PR00067 Catalase signature 304 331 3.8E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 Pfam PF06628 Catalase-related immune-responsive 442 500 7.2E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 SMART SM01060 25 417 5.8E-240 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 Gene3D G3DSA:2.40.180.10 21 514 1.8E-203 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 PIRSF PIRSF038928 15 507 5.6E-186 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_19310 a1014ff51cbc50bed6c40bf610b53aa3 514 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD94_08495 8dfc4b931ca03bc4d112e2cde5243e26 356 Gene3D G3DSA:3.20.20.70 3 349 2.7E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08495 8dfc4b931ca03bc4d112e2cde5243e26 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 5.6E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_08495 8dfc4b931ca03bc4d112e2cde5243e26 356 Pfam PF00793 DAHP synthetase I family 42 340 2.1E-104 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_08495 8dfc4b931ca03bc4d112e2cde5243e26 356 PIRSF PIRSF001361 1 354 3.3E-164 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_08495 8dfc4b931ca03bc4d112e2cde5243e26 356 SUPERFAMILY SSF51569 8 345 1.19E-138 T 14-10-2018 BJD94_01590 6d01447000c38b96c0b83664ea736473 530 Pfam PF06054 Competence protein CoiA-like family 31 74 2.4E-7 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF47917 352 466 1.73E-50 T 14-10-2018 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:1.10.1140.10 352 467 5.6E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 8.1E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF50615 1 75 1.91E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:3.40.50.300 76 351 1.8E-111 T 14-10-2018 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 SMART SM00382 142 334 5.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.205 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.3E-249 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF52540 77 355 8.49E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11070 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:2.40.10.170 2 75 4.2E-30 T 14-10-2018 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 SUPERFAMILY SSF54631 94 203 1.89E-26 T 14-10-2018 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 PIRSF PIRSF000130 1 487 3.6E-202 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 SMART SM01240 7 473 0.0 T 14-10-2018 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.435 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 SMART SM00116 96 144 1.0E-12 T 14-10-2018 IPR000644 CBS domain BJD94_08135 0e79bee5795cc74194486f42c0051515 487 SMART SM00116 158 206 2.3E-5 T 14-10-2018 IPR000644 CBS domain BJD94_08135 0e79bee5795cc74194486f42c0051515 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.5E-196 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 Gene3D G3DSA:3.20.20.70 1 486 1.9E-212 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.6E-163 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 SUPERFAMILY SSF51412 1 477 2.49E-125 T 14-10-2018 BJD94_08135 0e79bee5795cc74194486f42c0051515 487 Pfam PF00571 CBS domain 95 140 7.2E-10 T 14-10-2018 IPR000644 CBS domain BJD94_08135 0e79bee5795cc74194486f42c0051515 487 Pfam PF00571 CBS domain 149 201 4.7E-4 T 14-10-2018 IPR000644 CBS domain BJD94_03565 09862f122142ecaf6015fb5df93a7ac2 106 Gene3D G3DSA:2.40.10.320 1 61 5.7E-5 T 14-10-2018 BJD94_03565 09862f122142ecaf6015fb5df93a7ac2 106 Pfam PF13642 protein structure with unknown function 4 101 2.9E-28 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 Gene3D G3DSA:3.40.366.10 7 286 1.0E-106 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 Gene3D G3DSA:3.30.70.250 125 197 1.0E-106 T 14-10-2018 BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 SUPERFAMILY SSF55048 128 197 9.42E-19 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 9.5E-128 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 Pfam PF00698 Acyl transferase domain 7 297 1.3E-36 T 14-10-2018 IPR014043 Acyl transferase BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 PIRSF PIRSF000446 1 307 8.7E-138 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 5.4E-41 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BJD94_05720 268b8771f2b725ecd66d1090034cb7aa 307 SUPERFAMILY SSF52151 4 305 1.86E-81 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Gene3D G3DSA:2.30.30.100 272 322 8.3E-15 T 14-10-2018 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 5.5E-21 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.433 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 SUPERFAMILY SSF55681 79 269 9.64E-60 T 14-10-2018 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Pfam PF02237 Biotin protein ligase C terminal domain 274 318 4.2E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Gene3D G3DSA:3.30.930.10 67 271 5.3E-67 T 14-10-2018 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Gene3D G3DSA:1.10.10.10 2 65 5.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 SUPERFAMILY SSF46785 9 61 8.37E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 SUPERFAMILY SSF50037 273 318 5.95E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 1.5E-66 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD94_11885 62fa7f3be73b9a1489f333ce9cf25344 322 Pfam PF08279 HTH domain 9 60 9.0E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 BJD94_13610 70f2c9b4234f9a71dadce365907178d0 103 Gene3D G3DSA:1.20.5.50 53 102 2.7E-5 T 14-10-2018 BJD94_13610 70f2c9b4234f9a71dadce365907178d0 103 Pfam PF05164 Cell division protein ZapA 6 89 1.7E-18 T 14-10-2018 IPR007838 Cell division protein ZapA-like BJD94_13610 70f2c9b4234f9a71dadce365907178d0 103 SUPERFAMILY SSF102829 6 94 9.15E-23 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily BJD94_13610 70f2c9b4234f9a71dadce365907178d0 103 Gene3D G3DSA:1.10.20.30 1 47 2.8E-19 T 14-10-2018 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 SUPERFAMILY SSF53850 26 534 1.32E-115 T 14-10-2018 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 Gene3D G3DSA:3.90.76.10 60 167 4.3E-167 T 14-10-2018 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 PIRSF PIRSF002741 2 525 5.0E-89 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 Gene3D G3DSA:3.10.105.10 268 506 4.3E-167 T 14-10-2018 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 Gene3D G3DSA:3.40.190.10 44 529 4.3E-167 T 14-10-2018 BJD94_18525 bc11f6fd4e317393a4d457dd2980c00b 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 447 1.2E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 SUPERFAMILY SSF51726 1 354 1.38E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.539 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 6.9E-140 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 Gene3D G3DSA:3.20.20.210 1 355 3.5E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_11985 2e1501f420d07fd9941fa08e7a817f78 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.9E-141 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SUPERFAMILY SSF54106 473 519 5.62E-9 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Gene3D G3DSA:3.10.350.10 401 460 2.0E-14 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Gene3D G3DSA:3.10.350.10 522 573 3.9E-16 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Gene3D G3DSA:3.40.630.40 157 399 7.2E-68 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SMART SM00646 231 389 4.7E-61 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Pfam PF11741 AMIN domain 33 135 8.7E-16 T 14-10-2018 IPR021731 AMIN domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Gene3D G3DSA:3.10.350.10 471 521 5.1E-13 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Gene3D G3DSA:2.60.40.3500 24 137 5.2E-24 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SUPERFAMILY SSF54106 409 453 9.02E-10 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 171 389 1.1E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SUPERFAMILY SSF53187 169 392 9.42E-52 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SUPERFAMILY SSF54106 528 571 1.96E-10 T 14-10-2018 BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Pfam PF01476 LysM domain 529 571 4.9E-14 T 14-10-2018 IPR018392 LysM domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Pfam PF01476 LysM domain 411 452 7.7E-13 T 14-10-2018 IPR018392 LysM domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 Pfam PF01476 LysM domain 476 517 2.7E-10 T 14-10-2018 IPR018392 LysM domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SMART SM00257 528 571 5.6E-15 T 14-10-2018 IPR018392 LysM domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SMART SM00257 475 518 4.7E-12 T 14-10-2018 IPR018392 LysM domain BJD94_12385 36886e85cec5e6a7066e6fbf15478575 573 SMART SM00257 410 453 3.1E-13 T 14-10-2018 IPR018392 LysM domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 Gene3D G3DSA:3.30.70.270 13 193 2.4E-51 T 14-10-2018 BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 SMART SM00267 7 179 4.9E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 Pfam PF00563 EAL domain 196 434 2.2E-64 T 14-10-2018 IPR001633 EAL domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 20 173 7.5E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 SUPERFAMILY SSF55073 23 182 1.49E-43 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 Gene3D G3DSA:3.20.20.450 194 447 2.0E-88 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 SMART SM00052 190 439 9.8E-86 T 14-10-2018 IPR001633 EAL domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 14 179 2.4E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_15235 4b2fed2a560fd73b31463507dab9d017 453 SUPERFAMILY SSF141868 195 445 2.09E-79 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:3.40.50.620 1 187 3.9E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF06574 FAD synthetase 12 167 3.0E-57 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 PIRSF PIRSF004491 1 311 3.0E-106 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:2.40.30.30 188 311 4.9E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.3E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF52374 15 175 3.75E-33 T 14-10-2018 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 SMART SM00904 183 307 5.5E-63 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF82114 174 309 1.92E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BJD94_08555 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF01687 Riboflavin kinase 184 306 4.0E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BJD94_19330 4423dd438c5891b78008231778e48a46 127 Gene3D G3DSA:3.10.180.10 7 126 2.0E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_19330 4423dd438c5891b78008231778e48a46 127 SUPERFAMILY SSF54593 1 126 1.22E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_19330 4423dd438c5891b78008231778e48a46 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.2E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 4.5E-154 T 14-10-2018 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 Gene3D G3DSA:3.20.20.70 31 427 4.2E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 427 2.0E-10 T 14-10-2018 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 SUPERFAMILY SSF102114 43 386 6.93E-39 T 14-10-2018 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 Pfam PF13353 4Fe-4S single cluster domain 43 160 1.0E-4 T 14-10-2018 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 1.0E-16 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 Pfam PF04055 Radical SAM superfamily 43 211 1.4E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_20975 d506f60ad41c632cd4288e9de6a05953 434 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 5.8E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00448 2 115 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00072 Response regulator receiver domain 4 116 5.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00421 146 203 9.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF52172 2 132 1.34E-33 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 Gene3D G3DSA:3.40.50.12740 2 209 2.7E-59 T 14-10-2018 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_05935 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF46894 136 210 2.41E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 Pfam PF00271 Helicase conserved C-terminal domain 240 345 8.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 Gene3D G3DSA:3.40.50.300 218 430 4.2E-51 T 14-10-2018 BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 SMART SM00487 24 227 1.5E-50 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 SMART SM00490 264 345 7.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 Gene3D G3DSA:3.40.50.300 1 216 4.3E-72 T 14-10-2018 BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 SUPERFAMILY SSF52540 77 363 1.84E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19615 e3a757b082afeb7e5b16369c082990b4 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 1.6E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_16290 3b0737ee2ef8c600e2067dc726c29adb 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 400 1.9E-46 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_16290 3b0737ee2ef8c600e2067dc726c29adb 442 PIRSF PIRSF006603 2 441 3.6E-81 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_16290 3b0737ee2ef8c600e2067dc726c29adb 442 Pfam PF01554 MatE 18 178 3.5E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_16290 3b0737ee2ef8c600e2067dc726c29adb 442 Pfam PF01554 MatE 237 388 2.2E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 Gene3D G3DSA:1.10.287.990 20 83 3.6E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PIRSF PIRSF000349 1 202 1.8E-81 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 Gene3D G3DSA:2.40.500.20 84 201 3.3E-47 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 2.1E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 SUPERFAMILY SSF46609 1 86 3.54E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 7.4E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 SUPERFAMILY SSF54719 87 201 3.4E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.2E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.2E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.2E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.2E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_12150 9ee6f7a933edefb5e62d03e7fb9c4074 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.2E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.303 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 SUPERFAMILY SSF74982 9 139 9.42E-48 T 14-10-2018 IPR023620 Small protein B BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.9E-52 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 Pfam PF01668 SmpB protein 15 157 9.3E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 Gene3D G3DSA:2.40.280.10 8 136 1.9E-43 T 14-10-2018 IPR023620 Small protein B BJD94_08045 bcd2e8ab4a9a3c456f3ca21a2a734dae 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 1.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD94_20545 b40316fcbf20a3555b967f2de6283f0f 139 Gene3D G3DSA:3.40.1650.10 8 136 7.0E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BJD94_20545 b40316fcbf20a3555b967f2de6283f0f 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 5.5E-48 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BJD94_20545 b40316fcbf20a3555b967f2de6283f0f 139 SUPERFAMILY SSF102546 1 139 2.22E-43 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BJD94_20545 b40316fcbf20a3555b967f2de6283f0f 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.824 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 BJD94_01495 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 BJD94_01495 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 Pfam PF02384 N-6 DNA Methylase 207 539 2.8E-116 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 Gene3D G3DSA:3.40.50.150 208 522 2.9E-128 T 14-10-2018 BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 SUPERFAMILY SSF53335 13 578 2.44E-132 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 Gene3D G3DSA:1.20.1260.30 1 191 3.3E-65 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 Pfam PF12161 HsdM N-terminal domain 15 188 4.9E-18 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 254 268 5.1E-19 T 14-10-2018 BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 336 348 5.1E-19 T 14-10-2018 BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 247 5.1E-19 T 14-10-2018 BJD94_01640 563ccfaa58e0511a788777e9d6a9d534 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 370 394 5.1E-19 T 14-10-2018 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 PIRSF PIRSF005096 3 352 2.2E-116 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 Pfam PF01263 Aldose 1-epimerase 22 349 1.5E-86 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 1.5E-154 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 Gene3D G3DSA:2.70.98.10 11 351 6.9E-113 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_14655 14a847ea7f21ff9ebcce79744042e2d1 352 SUPERFAMILY SSF74650 8 350 1.51E-105 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 9.7E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.129 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.4E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.10.20.30 34 125 8.7E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.8E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.3E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.40.50.80 275 393 4.2E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF52343 258 402 2.62E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF54292 36 124 6.56E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF63380 105 272 1.7E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:2.40.30.10 126 264 2.7E-50 T 14-10-2018 BJD94_00100 8338632259edc8db2aa6e332d7bc94ea 407 PIRSF PIRSF000044 1 407 2.5E-217 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Gene3D G3DSA:3.30.450.20 49 266 2.4E-65 T 14-10-2018 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 SMART SM00283 361 622 1.3E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 SMART SM00304 292 346 1.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 SUPERFAMILY SSF103190 98 184 4.45E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 SUPERFAMILY SSF58104 314 621 1.83E-73 T 14-10-2018 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.8E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Gene3D G3DSA:3.30.450.20 62 173 2.4E-65 T 14-10-2018 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Pfam PF00672 HAMP domain 293 343 6.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Pfam PF02743 Cache domain 38 254 2.1E-29 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_01020 9ebc85c705e78add1632ceafc64dbb52 623 Gene3D G3DSA:1.10.287.950 291 623 2.8E-68 T 14-10-2018 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 SMART SM00830 9 89 1.3E-28 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 PIRSF PIRSF001499 1 374 1.3E-181 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 Gene3D G3DSA:1.10.3660.10 248 373 1.8E-48 T 14-10-2018 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 SUPERFAMILY SSF51735 91 237 3.94E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 SUPERFAMILY SSF48179 242 366 1.7E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 Pfam PF01817 Chorismate mutase type II 9 87 4.6E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 Gene3D G3DSA:1.20.59.10 1 80 6.8E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 SUPERFAMILY SSF48600 4 88 1.21E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 Gene3D G3DSA:3.40.50.720 81 247 5.9E-43 T 14-10-2018 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 Pfam PF02153 Prephenate dehydrogenase 138 344 3.7E-32 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BJD94_08490 60acdf65ede7447431c2364535d4bb12 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.5E-42 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 SMART SM00421 158 215 9.4E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 215 1.5E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 6.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 SUPERFAMILY SSF46894 155 217 2.72E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 Gene3D G3DSA:3.40.50.2300 13 147 2.5E-28 T 14-10-2018 BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 Gene3D G3DSA:1.10.10.10 150 219 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19725 22ac32d2db2e12a8e7b23a70d16dfa0c 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Gene3D G3DSA:3.40.50.11040 3 132 1.8E-20 T 14-10-2018 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Pfam PF05127 Helicase 181 348 1.4E-58 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Gene3D G3DSA:3.40.50.12320 178 338 1.7E-47 T 14-10-2018 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 SUPERFAMILY SSF52540 155 292 4.81E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 675 44.115 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Gene3D G3DSA:3.40.630.30 341 545 6.7E-71 T 14-10-2018 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Pfam PF13718 GNAT acetyltransferase 2 383 496 4.7E-19 T 14-10-2018 IPR000182 GNAT domain BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 Pfam PF08351 Domain of unknown function (DUF1726) 69 117 4.9E-6 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 BJD94_17955 e5ed6d7f04f4014c7395145662b13fe7 675 SUPERFAMILY SSF55729 374 547 2.7E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 SUPERFAMILY SSF53328 2 194 2.75E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.827 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 Pfam PF00551 Formyl transferase 2 182 4.9E-66 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 7.3E-78 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BJD94_00415 b464ed74e21cab4ec1dac6b061cc573a 212 Gene3D G3DSA:3.40.50.170 2 212 3.3E-85 T 14-10-2018 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 SUPERFAMILY SSF53901 4 270 3.51E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 7.1E-148 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 Gene3D G3DSA:3.40.47.10 126 398 5.9E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 SUPERFAMILY SSF53901 271 399 1.04E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 PIRSF PIRSF000429 1 402 6.3E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 Gene3D G3DSA:3.40.47.10 6 276 5.9E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.6E-98 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD94_16115 db736d5e4d7fc5f7e607ca367a72c71c 402 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.9E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD94_12585 c09d9bce702a5aa0c7613e80379fa1c8 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.2E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein BJD94_12585 c09d9bce702a5aa0c7613e80379fa1c8 118 SUPERFAMILY SSF75169 3 118 1.57E-37 T 14-10-2018 IPR027396 DsrEFH-like BJD94_12585 c09d9bce702a5aa0c7613e80379fa1c8 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 2.2E-47 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF BJD94_12585 c09d9bce702a5aa0c7613e80379fa1c8 118 Gene3D G3DSA:3.40.1260.10 2 118 6.9E-40 T 14-10-2018 IPR027396 DsrEFH-like BJD94_04650 d69b48ce54578466d06a069eed1f1654 389 SUPERFAMILY SSF55073 233 385 3.69E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_04650 d69b48ce54578466d06a069eed1f1654 389 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 383 1.3E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_04650 d69b48ce54578466d06a069eed1f1654 389 Gene3D G3DSA:3.30.70.270 218 387 1.3E-52 T 14-10-2018 BJD94_04650 d69b48ce54578466d06a069eed1f1654 389 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 387 9.9E-48 T 14-10-2018 IPR000160 GGDEF domain BJD94_04650 d69b48ce54578466d06a069eed1f1654 389 SMART SM00267 217 387 8.3E-54 T 14-10-2018 IPR000160 GGDEF domain BJD94_10060 a0a07486b4f27822ffd906b2cce9731e 420 SUPERFAMILY SSF53756 60 365 1.88E-15 T 14-10-2018 BJD94_10060 a0a07486b4f27822ffd906b2cce9731e 420 Pfam PF00534 Glycosyl transferases group 1 247 375 7.6E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_10060 a0a07486b4f27822ffd906b2cce9731e 420 Gene3D G3DSA:3.40.50.11720 33 210 4.0E-46 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BJD94_10060 a0a07486b4f27822ffd906b2cce9731e 420 Gene3D G3DSA:3.40.50.2000 217 406 1.5E-61 T 14-10-2018 BJD94_10060 a0a07486b4f27822ffd906b2cce9731e 420 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 1.4E-59 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BJD94_06585 076066ba621be2f29a5c0eb69f04ba8c 194 Gene3D G3DSA:1.20.1540.10 5 184 7.4E-22 T 14-10-2018 IPR035952 Rhomboid-like superfamily BJD94_06585 076066ba621be2f29a5c0eb69f04ba8c 194 SUPERFAMILY SSF144091 4 181 8.63E-30 T 14-10-2018 BJD94_06585 076066ba621be2f29a5c0eb69f04ba8c 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 32 179 2.1E-50 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria BJD94_06585 076066ba621be2f29a5c0eb69f04ba8c 194 Pfam PF01694 Rhomboid family 42 180 1.9E-13 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD94_11455 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 Pfam PF01202 Shikimate kinase 13 129 9.8E-13 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD94_11455 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 165 7.1E-64 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BJD94_11455 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 SUPERFAMILY SSF52540 4 166 2.84E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11455 ed8e0e40a400f9cd2b7ff0aad1be3dac 173 Gene3D G3DSA:3.40.50.300 2 167 8.0E-65 T 14-10-2018 BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 Gene3D G3DSA:3.40.50.300 246 457 9.1E-66 T 14-10-2018 BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 Gene3D G3DSA:3.40.50.1010 3 155 5.3E-28 T 14-10-2018 BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 SUPERFAMILY SSF88723 7 161 2.84E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 SMART SM00670 7 141 7.8E-10 T 14-10-2018 IPR002716 PIN domain BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 Pfam PF02562 PhoH-like protein 249 453 3.4E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 Pfam PF13638 PIN domain 9 150 3.4E-35 T 14-10-2018 IPR002716 PIN domain BJD94_13175 a0a06e651046891cde25191c6f93fa1c 459 SUPERFAMILY SSF52540 170 438 7.34E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 180 1.6E-9 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 Gene3D G3DSA:1.10.287.950 227 546 5.8E-62 T 14-10-2018 BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 SUPERFAMILY SSF58104 247 546 1.83E-63 T 14-10-2018 BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 SMART SM00283 284 545 1.1E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01695 b748de7364a30ee05cd35815f5fe6306 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 510 6.5E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01940 712c190ab20fd2019fe1dad87bde2697 210 Pfam PF13505 Outer membrane protein beta-barrel domain 29 177 2.5E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_01940 712c190ab20fd2019fe1dad87bde2697 210 SUPERFAMILY SSF56925 55 181 1.49E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_01940 712c190ab20fd2019fe1dad87bde2697 210 Gene3D G3DSA:2.40.160.20 34 192 2.2E-8 T 14-10-2018 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09885 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 2.7E-13 T 14-10-2018 BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 SUPERFAMILY SSF47616 164 312 8.63E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 SUPERFAMILY SSF52833 31 150 2.8E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 7.2E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 Gene3D G3DSA:3.40.30.130 1 166 4.3E-67 T 14-10-2018 BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 PIRSF PIRSF015753 5 312 9.4E-136 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 BJD94_06050 fd9a8dc04ec482540cd712f05ec59f68 316 Gene3D G3DSA:1.20.1050.10 167 316 3.8E-70 T 14-10-2018 BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 Gene3D G3DSA:3.30.70.270 352 526 8.8E-52 T 14-10-2018 BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 SMART SM00267 355 525 2.9E-53 T 14-10-2018 IPR000160 GGDEF domain BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 367 520 7.4E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 Gene3D G3DSA:3.30.450.20 145 267 7.9E-15 T 14-10-2018 BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 523 9.2E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_05070 7b61f1486a468fd5851742a8a2e925c9 532 SUPERFAMILY SSF55073 373 524 2.16E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 SUPERFAMILY SSF52402 5 247 2.65E-56 T 14-10-2018 BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 Gene3D G3DSA:2.40.30.10 287 372 2.6E-32 T 14-10-2018 BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.919 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 Pfam PF03054 tRNA methyl transferase 7 365 2.9E-142 T 14-10-2018 BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 2.7E-151 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 Gene3D G3DSA:3.40.50.620 1 215 9.0E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_05415 028471fc06ed6dcedef2d62d658165b1 374 Gene3D G3DSA:2.30.30.280 216 286 1.2E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 Gene3D G3DSA:3.20.20.450 396 637 2.6E-36 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 SUPERFAMILY SSF55073 233 386 1.18E-17 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 133 5.3E-28 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 SMART SM00052 397 639 9.7E-18 T 14-10-2018 IPR001633 EAL domain BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 Pfam PF00563 EAL domain 430 636 4.9E-45 T 14-10-2018 IPR001633 EAL domain BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 Gene3D G3DSA:3.30.70.270 212 387 8.8E-22 T 14-10-2018 BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 SMART SM00267 216 386 1.3E-7 T 14-10-2018 IPR000160 GGDEF domain BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 SUPERFAMILY SSF141868 428 636 2.88E-36 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_13050 3f09b133324fe7ce701f674188c9a1fd 665 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.5E-19 T 14-10-2018 IPR000160 GGDEF domain BJD94_12440 26a105f466bac67c7677d92bf1519ed5 141 SUPERFAMILY SSF46785 2 131 5.29E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_12440 26a105f466bac67c7677d92bf1519ed5 141 Gene3D G3DSA:1.10.10.10 1 136 5.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12440 26a105f466bac67c7677d92bf1519ed5 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 5.5E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BJD94_12440 26a105f466bac67c7677d92bf1519ed5 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.24 T 14-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 BJD94_12440 26a105f466bac67c7677d92bf1519ed5 141 Pfam PF02082 Transcriptional regulator 1 82 4.9E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type BJD94_11610 a0d3b865666df7b078064ef746f18bcb 516 PIRSF PIRSF028175 1 516 0.0 T 14-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 40 48.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 5.3E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.021 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.0056 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 2.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Gene3D G3DSA:2.150.10.10 29 86 9.4E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 SUPERFAMILY SSF51120 11 203 7.24E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.3E-12 T 14-10-2018 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.3E-12 T 14-10-2018 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.3E-12 T 14-10-2018 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 PRINTS PR00313 NodO calcium binding signature 67 78 2.3E-12 T 14-10-2018 BJD94_05970 678478eaf9fc8d7d8784b1255398ccb4 236 Gene3D G3DSA:2.150.10.10 87 224 8.0E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_04150 0f8d984c03e38dfc27518abb7676eba2 420 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 404 1.6E-103 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type BJD94_04150 0f8d984c03e38dfc27518abb7676eba2 420 Pfam PF04403 Paraquat-inducible protein A 250 406 1.1E-47 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BJD94_04150 0f8d984c03e38dfc27518abb7676eba2 420 Pfam PF04403 Paraquat-inducible protein A 56 207 3.7E-35 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like BJD94_04150 0f8d984c03e38dfc27518abb7676eba2 420 SUPERFAMILY SSF48695 203 249 6.56E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_03365 0e2321fad90e11af26a273521dd59ea0 182 Gene3D G3DSA:3.40.630.30 6 182 2.4E-19 T 14-10-2018 BJD94_03365 0e2321fad90e11af26a273521dd59ea0 182 Pfam PF00583 Acetyltransferase (GNAT) family 40 155 7.5E-9 T 14-10-2018 IPR000182 GNAT domain BJD94_03365 0e2321fad90e11af26a273521dd59ea0 182 SUPERFAMILY SSF55729 13 177 5.15E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 Pfam PF04055 Radical SAM superfamily 81 222 8.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 Gene3D G3DSA:3.20.20.70 18 364 2.9E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 7.6E-176 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.9E-27 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 SUPERFAMILY SSF102114 34 362 1.15E-53 T 14-10-2018 BJD94_10820 7c99a36b315dc5a45d3941606eb6e3a2 374 SMART SM00876 256 359 4.0E-38 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 Gene3D G3DSA:3.30.2350.10 85 316 2.8E-71 T 14-10-2018 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 Pfam PF01479 S4 domain 18 65 1.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 Gene3D G3DSA:3.10.290.10 2 76 6.1E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 SUPERFAMILY SSF55174 17 67 1.06E-10 T 14-10-2018 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.8E-105 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 3.6E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 SUPERFAMILY SSF55120 78 315 8.22E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_08435 c13257b108d27481eb47ed251d2d17ee 325 SMART SM00363 18 83 1.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 SMART SM00304 157 209 1.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 274 7.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 SUPERFAMILY SSF47384 194 275 5.69E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 SUPERFAMILY SSF55874 265 424 1.11E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 Gene3D G3DSA:1.10.287.130 161 276 3.7E-21 T 14-10-2018 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 SMART SM00387 318 426 3.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 SMART SM00388 210 275 9.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 424 1.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 Gene3D G3DSA:3.30.565.10 282 426 2.8E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 Pfam PF00672 HAMP domain 159 204 4.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_19080 b7b63f71783c7f376436281c8c37d9dc 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 SMART SM00079 26 251 1.6E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 30 249 3.9E-72 T 14-10-2018 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 SMART SM00062 26 252 1.0E-69 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_01235 bfd5084dc4b547844514224b1175d092 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BJD94_01235 bfd5084dc4b547844514224b1175d092 256 Gene3D G3DSA:3.40.190.10 112 208 3.9E-72 T 14-10-2018 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 3.9E-82 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 SUPERFAMILY SSF53850 1 253 3.45E-71 T 14-10-2018 BJD94_01235 bfd5084dc4b547844514224b1175d092 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 4.0E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 Pfam PF01371 Trp repressor protein 9 94 5.2E-34 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 84 4.1E-27 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 2.0E-39 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.735 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 PIRSF PIRSF003196 1 100 4.7E-41 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 Gene3D G3DSA:1.10.1270.10 1 98 5.2E-34 T 14-10-2018 IPR038116 TrpR-like superfamily BJD94_08465 2bd2ec621959bdccc47ff03ff29b2ec1 102 SUPERFAMILY SSF48295 2 95 1.78E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 SUPERFAMILY SSF52343 256 393 1.26E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Gene3D G3DSA:3.40.50.80 257 394 1.7E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Gene3D G3DSA:2.40.30.10 149 254 5.1E-33 T 14-10-2018 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Pfam PF00042 Globin 8 102 2.4E-14 T 14-10-2018 IPR000971 Globin GO:0020037 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Gene3D G3DSA:1.10.490.10 1 142 1.3E-49 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 SUPERFAMILY SSF46458 1 142 3.33E-37 T 14-10-2018 IPR009050 Globin-like superfamily BJD94_12435 77cf918947e450b47f92ec335c38211d 394 SUPERFAMILY SSF63380 149 254 7.43E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.8E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 56.659 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 BJD94_12435 77cf918947e450b47f92ec335c38211d 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.3E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 Pfam PF00691 OmpA family 187 282 7.8E-19 T 14-10-2018 IPR006665 OmpA-like domain BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 Gene3D G3DSA:3.30.1330.60 176 293 1.2E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 SUPERFAMILY SSF103088 157 287 6.28E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 3.1E-154 T 14-10-2018 BJD94_06180 a329c1ace31f0726a4f3defeee823800 293 Gene3D G3DSA:2.60.40.2540 22 175 1.6E-57 T 14-10-2018 BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 Gene3D G3DSA:3.40.190.290 91 291 2.1E-57 T 14-10-2018 BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 SUPERFAMILY SSF53850 90 294 4.34E-43 T 14-10-2018 BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 Gene3D G3DSA:1.10.10.10 3 89 1.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 SUPERFAMILY SSF46785 4 86 1.46E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18970 2b4f2611a699e0832283b885bdcba8d3 300 Pfam PF03466 LysR substrate binding domain 89 290 2.8E-39 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 19 306 8.5E-108 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 Gene3D G3DSA:1.10.150.130 14 108 9.8E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 55.442 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 SUPERFAMILY SSF47823 16 107 1.0E-12 T 14-10-2018 BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 4.3E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 Gene3D G3DSA:1.10.443.10 121 298 4.3E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 Pfam PF00589 Phage integrase family 122 290 2.2E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD94_11590 8bd121fe8d88e3f7838819287c5d5245 316 SUPERFAMILY SSF56349 116 302 1.88E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD94_17325 6b1fc24e4d6d915a886bafee7e815e5d 400 Pfam PF01266 FAD dependent oxidoreductase 3 393 6.9E-66 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_17325 6b1fc24e4d6d915a886bafee7e815e5d 400 SUPERFAMILY SSF51905 2 302 7.34E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_17325 6b1fc24e4d6d915a886bafee7e815e5d 400 Gene3D G3DSA:3.50.50.60 3 390 5.3E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_17325 6b1fc24e4d6d915a886bafee7e815e5d 400 Gene3D G3DSA:3.30.9.10 86 356 5.3E-77 T 14-10-2018 BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 322 31.563 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 Gene3D G3DSA:1.10.40.50 261 331 3.8E-21 T 14-10-2018 BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 314 2.5E-47 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 SUPERFAMILY SSF52540 103 319 3.25E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 Gene3D G3DSA:3.40.50.300 87 258 5.1E-43 T 14-10-2018 BJD94_18280 9f961519cfefffa0c4d6e415723ee803 353 Pfam PF03193 RsgA GTPase 85 258 1.8E-48 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PIRSF PIRSF003161 18 351 2.7E-113 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14841 FliG middle domain 134 206 2.7E-25 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14842 FliG N-terminal domain 24 124 2.8E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 107 212 5.0E-29 T 14-10-2018 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 214 351 8.6E-44 T 14-10-2018 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 133 344 8.63E-67 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 25 136 4.58E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF01706 FliG C-terminal domain 236 343 1.8E-41 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 20 104 1.5E-17 T 14-10-2018 BJD94_00595 75f594f89c55c2e6c82ca1df568fdd32 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 2.9E-96 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Pfam PF00204 DNA gyrase B 218 384 2.0E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Gene3D G3DSA:3.40.50.670 390 621 3.3E-92 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 SMART SM00387 27 173 7.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Gene3D G3DSA:3.30.230.10 216 389 1.2E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 14-10-2018 IPR006171 TOPRIM domain BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Gene3D G3DSA:3.30.565.10 2 215 5.5E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 SUPERFAMILY SSF55874 5 215 8.75E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 SUPERFAMILY SSF54211 217 382 1.65E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.7E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.924 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 SMART SM00433 34 622 7.8E-212 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-57 T 14-10-2018 BJD94_09025 0b81c4742baa04e15efae20aea3b9ba1 626 SUPERFAMILY SSF56719 388 619 3.14E-79 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:3.40.190.10 164 261 2.3E-38 T 14-10-2018 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:3.40.190.10 92 287 2.3E-38 T 14-10-2018 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 SUPERFAMILY SSF46785 9 88 5.99E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 Gene3D G3DSA:1.10.10.10 4 89 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 SUPERFAMILY SSF53850 89 292 1.25E-27 T 14-10-2018 BJD94_15855 5e72fbea33ecbc99a49e07c017772a6c 295 Pfam PF03466 LysR substrate binding domain 88 289 4.0E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_06740 ab92ffb628cf8df31ce03f82d62e0241 455 Gene3D G3DSA:3.40.50.12780 15 331 2.9E-22 T 14-10-2018 BJD94_06740 ab92ffb628cf8df31ce03f82d62e0241 455 Gene3D G3DSA:3.30.300.30 346 452 2.2E-13 T 14-10-2018 BJD94_06740 ab92ffb628cf8df31ce03f82d62e0241 455 SUPERFAMILY SSF56801 33 454 5.49E-51 T 14-10-2018 BJD94_06740 ab92ffb628cf8df31ce03f82d62e0241 455 Pfam PF00501 AMP-binding enzyme 23 307 2.5E-14 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_07425 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_07425 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_07425 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03545 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03545 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03545 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03470 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03470 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03470 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03105 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03105 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03105 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03440 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03440 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03440 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03665 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 5 55 7.7E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03665 eef8e4013a23b776068e4733e63ddab9 166 Pfam PF01527 Transposase 61 135 2.2E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03665 eef8e4013a23b776068e4733e63ddab9 166 SUPERFAMILY SSF46689 5 54 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_05580 d8aed1e525ff0e47c677f0806fbc24ed 332 Gene3D G3DSA:1.10.3720.10 94 322 1.4E-17 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05580 d8aed1e525ff0e47c677f0806fbc24ed 332 SUPERFAMILY SSF161098 100 312 5.49E-14 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05580 d8aed1e525ff0e47c677f0806fbc24ed 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 329 6.2E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14740 bede40d15b878e01acf9b0bcbd0faa09 607 Gene3D G3DSA:3.40.720.10 241 534 6.1E-50 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_14740 bede40d15b878e01acf9b0bcbd0faa09 607 SUPERFAMILY SSF53649 246 571 5.83E-55 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_14740 bede40d15b878e01acf9b0bcbd0faa09 607 PIRSF PIRSF004950 1 606 1.3E-233 T 14-10-2018 IPR012159 Inner membrane protein YejM BJD94_14740 bede40d15b878e01acf9b0bcbd0faa09 607 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 1.1E-59 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal BJD94_14740 bede40d15b878e01acf9b0bcbd0faa09 607 Pfam PF00884 Sulfatase 250 521 2.3E-31 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_06285 29f1bfcaec66efcd2c88e723db88ca5d 456 Pfam PF02386 Cation transport protein 50 438 1.2E-55 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BJD94_06285 29f1bfcaec66efcd2c88e723db88ca5d 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 428 7.6E-125 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BJD94_16825 86ab808b82c603b0b32e275546e78f45 346 Gene3D G3DSA:3.30.360.10 124 337 1.4E-118 T 14-10-2018 BJD94_16825 86ab808b82c603b0b32e275546e78f45 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 2.4E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD94_16825 86ab808b82c603b0b32e275546e78f45 346 Gene3D G3DSA:3.40.50.720 7 314 1.4E-118 T 14-10-2018 BJD94_16825 86ab808b82c603b0b32e275546e78f45 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 204 9.5E-13 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BJD94_16825 86ab808b82c603b0b32e275546e78f45 346 SUPERFAMILY SSF51735 5 203 4.11E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF51717 15 208 3.92E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 Pfam PF04551 GcpE protein 14 354 1.3E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF56014 265 354 2.28E-11 T 14-10-2018 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.8E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 PIRSF PIRSF004640 1 364 1.2E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.20.20.20 1 261 1.9E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_08180 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.30.413.10 262 362 2.8E-25 T 14-10-2018 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 SMART SM00347 39 137 2.7E-27 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 Pfam PF01047 MarR family 46 102 5.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 SUPERFAMILY SSF46785 16 151 2.48E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 8.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_15805 01c69a58b3f977a6daf1bc584ec11294 152 Gene3D G3DSA:1.10.10.10 11 152 5.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 SUPERFAMILY SSF52172 16 197 3.84E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 SUPERFAMILY SSF52540 154 384 6.53E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Pfam PF00072 Response regulator receiver domain 18 128 2.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Pfam PF02954 Bacterial regulatory protein, Fis family 434 475 9.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Pfam PF00158 Sigma-54 interaction domain 155 321 9.0E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Gene3D G3DSA:1.10.8.60 325 389 2.0E-17 T 14-10-2018 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 SMART SM00448 16 127 4.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 SUPERFAMILY SSF46689 427 476 4.66E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Gene3D G3DSA:1.10.10.60 429 476 8.0E-12 T 14-10-2018 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 SMART SM00382 175 318 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Gene3D G3DSA:3.40.50.2300 17 134 1.7E-29 T 14-10-2018 BJD94_03835 5be7baf2e7232f0163a679da74aebe80 484 Gene3D G3DSA:3.40.50.300 140 324 4.9E-64 T 14-10-2018 BJD94_12870 6b7f1b7163ccebc2c4b18b2c4f13aa4e 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 7.0E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 BJD94_12870 6b7f1b7163ccebc2c4b18b2c4f13aa4e 139 SUPERFAMILY SSF111038 1 139 4.19E-51 T 14-10-2018 IPR035917 YjbQ-like superfamily BJD94_12870 6b7f1b7163ccebc2c4b18b2c4f13aa4e 139 Gene3D G3DSA:2.60.120.460 2 139 2.6E-44 T 14-10-2018 IPR035917 YjbQ-like superfamily BJD94_12870 6b7f1b7163ccebc2c4b18b2c4f13aa4e 139 PIRSF PIRSF004681 1 139 1.0E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 BJD94_12870 6b7f1b7163ccebc2c4b18b2c4f13aa4e 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.2E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SUPERFAMILY SSF47384 445 527 3.73E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SMART SM00387 573 684 1.9E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Pfam PF00989 PAS fold 877 926 6.1E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SUPERFAMILY SSF52172 719 841 2.13E-41 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SMART SM00304 377 430 2.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SUPERFAMILY SSF55874 516 688 4.98E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SUPERFAMILY SSF158472 378 428 6.8E-11 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Pfam PF00672 HAMP domain 379 427 8.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Pfam PF00072 Response regulator receiver domain 726 837 2.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:3.30.565.10 526 688 1.8E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 4.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:3.40.50.2300 723 863 2.2E-41 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SMART SM00091 874 939 2.4E-5 T 14-10-2018 IPR000014 PAS domain BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SMART SM00448 723 836 3.1E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:1.10.8.500 376 427 2.0E-16 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:3.30.450.20 258 358 5.2E-7 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SMART SM00388 459 527 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:3.30.450.20 864 956 2.9E-8 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 Gene3D G3DSA:1.10.287.130 428 525 1.3E-22 T 14-10-2018 BJD94_14200 0003b8ae57fb1886c02cc195a729479f 1129 SUPERFAMILY SSF55785 861 930 8.03E-9 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_08385 cfca6b7d9c5f18374d5869f0702089a8 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_08385 cfca6b7d9c5f18374d5869f0702089a8 84 SUPERFAMILY SSF54862 4 72 3.35E-17 T 14-10-2018 BJD94_08385 cfca6b7d9c5f18374d5869f0702089a8 84 Gene3D G3DSA:3.30.70.20 2 83 1.7E-34 T 14-10-2018 BJD94_08385 cfca6b7d9c5f18374d5869f0702089a8 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_10250 b2515a586062db1c3a935e9c17c20cd1 213 SUPERFAMILY SSF53271 2 211 1.11E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_10250 b2515a586062db1c3a935e9c17c20cd1 213 Gene3D G3DSA:3.40.50.2020 1 213 3.1E-79 T 14-10-2018 BJD94_10250 b2515a586062db1c3a935e9c17c20cd1 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.5E-70 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_10250 b2515a586062db1c3a935e9c17c20cd1 213 Pfam PF00156 Phosphoribosyl transferase domain 43 163 2.4E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_10250 b2515a586062db1c3a935e9c17c20cd1 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.153 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.40.190.80 143 267 1.1E-38 T 14-10-2018 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.30.540.10 1 140 1.3E-50 T 14-10-2018 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 Pfam PF00459 Inositol monophosphatase family 2 258 8.8E-71 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 SUPERFAMILY SSF56655 1 259 2.49E-85 T 14-10-2018 BJD94_08250 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 514 1.3E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SMART SM00267 351 519 1.3E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Gene3D G3DSA:1.20.1480.50 270 359 1.6E-14 T 14-10-2018 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 519 1.4E-29 T 14-10-2018 IPR000160 GGDEF domain BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SUPERFAMILY SSF141868 535 786 1.44E-83 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SMART SM00052 529 774 6.2E-96 T 14-10-2018 IPR001633 EAL domain BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Gene3D G3DSA:3.30.70.270 360 531 1.1E-44 T 14-10-2018 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Pfam PF14827 Double sensory domain of two-component sensor kinase 47 202 8.4E-11 T 14-10-2018 IPR029150 Double Cache domain 3 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SUPERFAMILY SSF158472 304 353 3.66E-11 T 14-10-2018 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Pfam PF00672 HAMP domain 303 352 3.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Gene3D G3DSA:3.20.20.450 532 787 1.3E-87 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SUPERFAMILY SSF55073 367 519 4.32E-34 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 Pfam PF00563 EAL domain 535 769 4.2E-71 T 14-10-2018 IPR001633 EAL domain BJD94_15710 1d39664f31e5927b82244bc3ad0b0873 797 SMART SM00304 303 356 5.0E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_03600 b32829835f53f81d8070347891899e3a 89 Gene3D G3DSA:1.20.5.780 1 86 7.2E-17 T 14-10-2018 BJD94_03600 b32829835f53f81d8070347891899e3a 89 Pfam PF08681 Protein of unknown function (DUF1778) 5 81 1.6E-21 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 BJD94_03600 b32829835f53f81d8070347891899e3a 89 SUPERFAMILY SSF47598 2 80 1.49E-16 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD94_11390 ee4b7bfa87db9c7cd3abd3aefe2ce657 325 SUPERFAMILY SSF161098 89 302 2.22E-16 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11390 ee4b7bfa87db9c7cd3abd3aefe2ce657 325 Gene3D G3DSA:1.10.3720.10 84 314 9.0E-19 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11390 ee4b7bfa87db9c7cd3abd3aefe2ce657 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.1E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 Gene3D G3DSA:3.40.190.10 138 337 7.6E-119 T 14-10-2018 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 Pfam PF13343 Bacterial extracellular solute-binding protein 88 304 1.6E-21 T 14-10-2018 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 Gene3D G3DSA:3.40.190.10 38 312 7.6E-119 T 14-10-2018 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 33 336 3.5E-143 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 SUPERFAMILY SSF53850 36 337 4.76E-67 T 14-10-2018 BJD94_09600 c570cbbcc2c78f02f0ad345014303773 342 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 26 341 5.3E-149 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 BJD94_02140 aac6acc57b40e65142be40ddfa792ccf 304 SUPERFAMILY SSF111331 2 302 3.92E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BJD94_02140 aac6acc57b40e65142be40ddfa792ccf 304 Gene3D G3DSA:3.40.50.10330 2 133 5.0E-30 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BJD94_02140 aac6acc57b40e65142be40ddfa792ccf 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 3.2E-23 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BJD94_02140 aac6acc57b40e65142be40ddfa792ccf 304 SMART SM00046 2 135 2.0E-5 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BJD94_02140 aac6acc57b40e65142be40ddfa792ccf 304 Gene3D G3DSA:2.60.200.40 136 293 1.0E-23 T 14-10-2018 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 Gene3D G3DSA:1.10.10.10 5 90 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 Gene3D G3DSA:3.40.190.10 96 281 5.7E-8 T 14-10-2018 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 Pfam PF03466 LysR substrate binding domain 94 297 4.2E-19 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 SUPERFAMILY SSF53850 96 297 1.99E-19 T 14-10-2018 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 Gene3D G3DSA:3.40.190.10 177 274 5.7E-8 T 14-10-2018 BJD94_17805 9c35b4f213f8aecda017193d2c62fd66 300 SUPERFAMILY SSF46785 6 86 2.1E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 221 1.3E-73 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 88.944 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 Gene3D G3DSA:2.30.210.20 4 63 4.0E-27 T 14-10-2018 BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 3.1E-66 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 SUPERFAMILY SSF55729 4 232 5.51E-86 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_01325 58be4c7d9ee3175ff5a6aa80e7aea3ce 237 Gene3D G3DSA:3.40.630.70 64 236 5.3E-59 T 14-10-2018 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 Gene3D G3DSA:1.10.10.60 236 344 1.0E-24 T 14-10-2018 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 8.6E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 SUPERFAMILY SSF46689 290 341 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 Pfam PF12833 Helix-turn-helix domain 261 339 5.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 9.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 9.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_01420 507bf4f408c300071cf3fb825ef081de 349 SMART SM00342 255 337 9.9E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17440 2f5141e5e4f2cd94700f7c05b3d1f6c3 423 Pfam PF02321 Outer membrane efflux protein 230 407 6.0E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_17440 2f5141e5e4f2cd94700f7c05b3d1f6c3 423 Pfam PF02321 Outer membrane efflux protein 28 204 3.4E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_17440 2f5141e5e4f2cd94700f7c05b3d1f6c3 423 Gene3D G3DSA:1.20.1600.10 26 422 3.7E-76 T 14-10-2018 BJD94_17440 2f5141e5e4f2cd94700f7c05b3d1f6c3 423 SUPERFAMILY SSF56954 4 411 6.54E-76 T 14-10-2018 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 SUPERFAMILY SSF53850 37 541 2.48E-106 T 14-10-2018 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 Gene3D G3DSA:3.40.190.10 44 540 4.9E-195 T 14-10-2018 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 Gene3D G3DSA:3.90.76.10 63 169 4.9E-195 T 14-10-2018 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 PIRSF PIRSF002741 2 539 1.3E-69 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 Gene3D G3DSA:3.10.105.10 269 516 4.9E-195 T 14-10-2018 BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BJD94_14195 bd51aafe03b2d8b1e54ba70dfc98ed2f 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 452 2.1E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_05945 407dbcd88e2937873f6ff3fe49c6520e 700 Pfam PF02378 Phosphotransferase system, EIIC 31 333 3.7E-17 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_05945 407dbcd88e2937873f6ff3fe49c6520e 700 SUPERFAMILY SSF141868 450 690 4.71E-64 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_05945 407dbcd88e2937873f6ff3fe49c6520e 700 SMART SM00052 436 680 1.2E-57 T 14-10-2018 IPR001633 EAL domain BJD94_05945 407dbcd88e2937873f6ff3fe49c6520e 700 Gene3D G3DSA:3.20.20.450 443 692 3.3E-68 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_05945 407dbcd88e2937873f6ff3fe49c6520e 700 Pfam PF00563 EAL domain 449 674 8.2E-60 T 14-10-2018 IPR001633 EAL domain BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.7E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 SUPERFAMILY SSF50249 978 1066 5.31E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.5E-32 T 14-10-2018 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Pfam PF02811 PHP domain 8 171 3.1E-42 T 14-10-2018 IPR004013 PHP domain GO:0003824 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 3.0E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 SUPERFAMILY SSF89550 5 263 1.1E-13 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Gene3D G3DSA:2.40.50.140 984 1072 1.8E-8 T 14-10-2018 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Gene3D G3DSA:3.20.20.140 1 270 2.3E-91 T 14-10-2018 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 2.3E-175 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00310 44b0779af6f6a83e55b4116fcb7b2711 1159 SMART SM00481 7 74 2.1E-26 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD94_13695 6f83b778f4debc145b7a4941276db046 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.3E-109 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 1.8E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF52540 29 224 7.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13695 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.40.50.300 20 202 1.1E-52 T 14-10-2018 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.30.300.20 204 318 2.8E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_13695 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF54814 200 316 3.6E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD94_13695 6f83b778f4debc145b7a4941276db046 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.717 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 SUPERFAMILY SSF46894 150 213 1.19E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 Gene3D G3DSA:1.10.10.10 146 220 1.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 2.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 Gene3D G3DSA:3.40.50.2300 5 145 7.9E-37 T 14-10-2018 BJD94_19720 4aace8a70faf6d18b0e8ddc37e1375cd 221 SMART SM00421 153 210 4.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Gene3D G3DSA:3.40.228.10 195 394 7.7E-132 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Gene3D G3DSA:2.40.40.20 767 951 8.6E-49 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 9.4E-55 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 PIRSF PIRSF036643 446 593 3.9E-11 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 PIRSF PIRSF036643 641 677 420.0 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 PIRSF PIRSF036643 12 440 2.1E-100 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 PIRSF PIRSF036643 791 951 1.1E-16 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Gene3D G3DSA:3.40.50.740 126 617 7.7E-132 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 SMART SM00926 61 115 7.1E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 SUPERFAMILY SSF50692 752 951 1.62E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 8.7E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 SUPERFAMILY SSF53706 60 646 7.85E-201 T 14-10-2018 BJD94_03895 dc25965dc1e07097c4366ffc832d3c24 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.4E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 472 1.2E-8 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 Gene3D G3DSA:3.20.20.60 3 339 2.3E-141 T 14-10-2018 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 Gene3D G3DSA:2.40.33.10 70 170 2.3E-141 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 1.7E-125 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 SUPERFAMILY SSF52935 350 477 5.31E-21 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 Gene3D G3DSA:3.40.1380.20 340 473 2.3E-141 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 SUPERFAMILY SSF51621 3 345 7.07E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 221 247 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 248 272 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 298 316 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 188 202 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 273 297 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 PRINTS PR01050 Pyruvate kinase family signature 317 333 4.4E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 SUPERFAMILY SSF50800 71 168 2.09E-23 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD94_21215 e7dd6d9925a06606c60d2c3ed5ec494e 489 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 5.2E-148 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 SMART SM00962 284 477 1.8E-65 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 90 372 3.7E-70 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 Gene3D G3DSA:1.20.120.1380 259 468 1.4E-58 T 14-10-2018 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 SMART SM00382 283 450 2.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 Gene3D G3DSA:3.40.50.300 279 465 1.4E-58 T 14-10-2018 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 Pfam PF00448 SRP54-type protein, GTPase domain 286 474 5.5E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_00665 8a3aeb3f8b594266a8afcdb4a3c67c9e 497 SUPERFAMILY SSF52540 280 472 1.02E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 SUPERFAMILY SSF53383 6 471 7.91E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 Pfam PF01212 Beta-eliminating lyase 49 437 2.9E-87 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 PIRSF PIRSF001386 3 472 5.0E-205 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 Gene3D G3DSA:3.40.640.10 61 334 1.6E-196 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 3.7E-298 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 95.983 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 BJD94_16720 d17689a7bb79c2fe4aca70d8360ca8ff 473 Gene3D G3DSA:3.90.1150.10 10 468 1.6E-196 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 Pfam PF03466 LysR substrate binding domain 96 296 9.1E-25 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 SUPERFAMILY SSF53850 88 294 3.98E-37 T 14-10-2018 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 Gene3D G3DSA:3.40.190.10 88 291 8.6E-47 T 14-10-2018 BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 Gene3D G3DSA:1.10.10.10 1 86 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 SUPERFAMILY SSF46785 2 82 3.63E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21010 8f92bfdae30ae05ae58252d59f3f695d 301 Gene3D G3DSA:3.40.190.10 169 267 8.6E-47 T 14-10-2018 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 SUPERFAMILY SSF49493 262 347 6.28E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 SUPERFAMILY SSF57938 137 213 3.53E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Pfam PF01556 DnaJ C terminal domain 124 336 4.9E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Gene3D G3DSA:2.60.260.20 258 366 6.5E-29 T 14-10-2018 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.95 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Gene3D G3DSA:1.10.287.110 1 114 7.3E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Pfam PF00226 DnaJ domain 5 67 2.5E-27 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 SUPERFAMILY SSF46565 1 111 4.06E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 3.9E-141 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 SMART SM00271 4 62 1.7E-31 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Gene3D G3DSA:2.10.230.10 142 212 2.4E-25 T 14-10-2018 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 Pfam PF00684 DnaJ central domain 150 210 5.4E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site BJD94_07980 44848336a74c7b5e3ec4de96f395d307 382 SUPERFAMILY SSF49493 116 264 1.14E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Gene3D G3DSA:3.90.470.20 1 126 2.8E-40 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.7E-42 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.143 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 SUPERFAMILY SSF56214 3 125 7.06E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 3.8E-22 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 3.3E-33 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BJD94_13710 ecb8c4deb8bd6220cf2c0c9068cdc0b9 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 2.0E-40 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 103 372 7.5E-180 T 14-10-2018 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 7.6E-199 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.375 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 PIRSF PIRSF000497 1 381 4.3E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.6E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 233 382 1.53E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 11 270 7.5E-180 T 14-10-2018 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 5 233 7.5E-180 T 14-10-2018 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 111 232 1.26E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_13540 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 Gene3D G3DSA:3.30.450.20 392 524 2.6E-7 T 14-10-2018 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 SMART SM00304 346 398 0.0015 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 SUPERFAMILY SSF55874 634 785 1.22E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 765 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 784 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 6.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 PIRSF PIRSF037119 1 787 0.0 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 SUPERFAMILY SSF47384 561 633 1.57E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 682 785 2.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 SMART SM00388 565 633 4.8E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 Gene3D G3DSA:1.10.287.130 541 628 1.6E-17 T 14-10-2018 BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 Gene3D G3DSA:3.30.565.10 635 787 6.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 SMART SM00387 676 787 2.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_21230 cc49a66f03137c1710dd6b168b20a26c 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 631 8.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_09455 45f781eccdee883797fb1cef047712df 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.8E-130 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 BJD94_09455 45f781eccdee883797fb1cef047712df 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 1.1E-47 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BJD94_09455 45f781eccdee883797fb1cef047712df 310 SUPERFAMILY SSF56327 146 309 2.16E-41 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_09455 45f781eccdee883797fb1cef047712df 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.735 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BJD94_09455 45f781eccdee883797fb1cef047712df 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.5E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_09455 45f781eccdee883797fb1cef047712df 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 BJD94_09455 45f781eccdee883797fb1cef047712df 310 SUPERFAMILY SSF51735 1 145 1.4E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_09455 45f781eccdee883797fb1cef047712df 310 PIRSF PIRSF000102 1 305 2.5E-62 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_09455 45f781eccdee883797fb1cef047712df 310 Gene3D G3DSA:3.40.50.720 1 146 3.7E-66 T 14-10-2018 BJD94_09455 45f781eccdee883797fb1cef047712df 310 Gene3D G3DSA:3.90.110.10 147 310 8.8E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 103 288 4.1E-60 T 14-10-2018 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 Pfam PF03466 LysR substrate binding domain 91 289 7.1E-37 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 163 261 4.1E-60 T 14-10-2018 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF53850 92 294 6.7E-38 T 14-10-2018 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF46785 3 85 4.54E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:1.10.10.10 7 95 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_07790 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 SUPERFAMILY SSF46785 13 123 1.22E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 56.367 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Pfam PF17192 MukF middle domain 126 286 2.1E-78 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 SUPERFAMILY SSF140570 124 286 2.35E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Gene3D G3DSA:1.20.58.590 124 316 9.1E-81 T 14-10-2018 IPR036141 MukF, middle domain superfamily BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Pfam PF17193 MukF C-terminal domain 288 445 3.0E-77 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Gene3D G3DSA:1.10.225.40 358 445 1.4E-38 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Pfam PF03882 MukF winged-helix domain 10 122 1.5E-54 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 PIRSF PIRSF018282 1 445 4.4E-255 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 BJD94_01405 87a117f0f2c6205df844821b9df8d65d 445 Gene3D G3DSA:1.10.10.10 29 123 3.4E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18865 923f95aff1f314d28001a0becec38825 715 Pfam PF08453 Peptidase family M9 N-terminal 61 245 2.6E-47 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain BJD94_18865 923f95aff1f314d28001a0becec38825 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 424 440 2.3E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_18865 923f95aff1f314d28001a0becec38825 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 466 484 2.3E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_18865 923f95aff1f314d28001a0becec38825 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 406 420 2.3E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_18865 923f95aff1f314d28001a0becec38825 715 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 490 505 2.3E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_18865 923f95aff1f314d28001a0becec38825 715 Pfam PF01752 Collagenase 306 590 4.7E-109 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 BJD94_18865 923f95aff1f314d28001a0becec38825 715 Gene3D G3DSA:2.60.120.380 614 713 4.7E-11 T 14-10-2018 BJD94_18865 923f95aff1f314d28001a0becec38825 715 Gene3D G3DSA:1.10.1740.190 336 481 9.0E-31 T 14-10-2018 BJD94_18865 923f95aff1f314d28001a0becec38825 715 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 630 702 3.8E-8 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 263 9.4E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SMART SM00387 802 913 7.6E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF52172 994 1122 1.2E-31 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF47226 1092 1193 4.45E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF00072 Response regulator receiver domain 995 1108 8.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.30.565.10 757 914 5.3E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 803 911 6.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF00512 His Kinase A (phospho-acceptor) domain 690 754 2.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SMART SM00062 295 510 0.0018 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SMART SM00062 60 280 6.6E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.40.190.10 146 236 1.2E-32 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.40.190.10 380 469 5.0E-24 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SMART SM00448 993 1109 3.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 910 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 891 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 866 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 852 1.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF47384 676 756 8.04E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF53850 61 273 1.02E-23 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.30.450.20 552 679 1.5E-6 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.40.50.2300 989 1119 1.1E-29 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SMART SM00388 690 755 8.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 298 506 1.9E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF53850 294 510 4.67E-19 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 SUPERFAMILY SSF55874 744 911 2.49E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.40.190.10 293 504 5.0E-24 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:1.10.287.130 680 756 5.6E-19 T 14-10-2018 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Pfam PF01627 Hpt domain 1127 1216 5.8E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:1.20.120.160 1120 1221 8.8E-6 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_20870 b2d0bf626599739ee5e17a5c771f85dc 1223 Gene3D G3DSA:3.40.190.10 52 260 1.2E-32 T 14-10-2018 BJD94_00705 f24ecf48e4ae5bc9e05d2a743d5600c5 357 SMART SM00260 207 341 4.0E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_00705 f24ecf48e4ae5bc9e05d2a743d5600c5 357 PIRSF PIRSF020479 7 356 7.7E-153 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like BJD94_00705 f24ecf48e4ae5bc9e05d2a743d5600c5 357 SUPERFAMILY SSF50341 210 344 1.7E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_00705 f24ecf48e4ae5bc9e05d2a743d5600c5 357 Pfam PF01584 CheW-like domain 211 343 5.0E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 Gene3D G3DSA:3.40.50.80 103 237 3.9E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 1.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 Gene3D G3DSA:2.40.30.10 1 102 5.2E-22 T 14-10-2018 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 SUPERFAMILY SSF63380 2 101 7.95E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 214 3.4E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_10705 3ee7d4891e7ccdddde8721e4e8ee552a 237 SUPERFAMILY SSF52343 104 235 1.83E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_02350 3b7bb905882703b18692f58a87c88d81 430 Gene3D G3DSA:3.40.50.300 181 416 1.8E-71 T 14-10-2018 BJD94_02350 3b7bb905882703b18692f58a87c88d81 430 Pfam PF00437 Type II/IV secretion system protein 84 360 3.6E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_02350 3b7bb905882703b18692f58a87c88d81 430 SUPERFAMILY SSF52540 61 366 3.98E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02350 3b7bb905882703b18692f58a87c88d81 430 Gene3D G3DSA:3.30.450.380 18 177 4.3E-39 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Gene3D G3DSA:1.20.1330.10 45 177 5.8E-74 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Gene3D G3DSA:1.20.58.1830 5 33 5.8E-74 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Gene3D G3DSA:2.170.280.10 178 191 5.8E-74 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Gene3D G3DSA:1.20.1330.10 203 315 2.6E-11 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 SUPERFAMILY SSF64518 1 376 3.66E-97 T 14-10-2018 BJD94_00540 a4465cc85fc644f7f7015723633adc69 377 Gene3D G3DSA:1.10.8.410 325 376 2.1E-20 T 14-10-2018 BJD94_01990 eb35dc28adf61306947813c2402f31df 453 Gene3D G3DSA:3.30.1330.90 10 159 1.8E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD94_01990 eb35dc28adf61306947813c2402f31df 453 Pfam PF03313 Serine dehydratase alpha chain 183 448 7.2E-98 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BJD94_01990 eb35dc28adf61306947813c2402f31df 453 SUPERFAMILY SSF143548 16 157 1.96E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD94_01990 eb35dc28adf61306947813c2402f31df 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.5E-227 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD94_01990 eb35dc28adf61306947813c2402f31df 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD94_04965 5508f07b9cc0e351926be976884179b0 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 3.5E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BJD94_04965 5508f07b9cc0e351926be976884179b0 415 Gene3D G3DSA:3.40.50.1970 1 180 1.5E-47 T 14-10-2018 BJD94_04965 5508f07b9cc0e351926be976884179b0 415 SUPERFAMILY SSF56796 1 380 3.53E-89 T 14-10-2018 BJD94_04965 5508f07b9cc0e351926be976884179b0 415 Gene3D G3DSA:1.20.1090.10 187 383 3.5E-41 T 14-10-2018 BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 436 5.9E-47 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Gene3D G3DSA:2.60.120.10 5 141 8.3E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 SUPERFAMILY SSF54631 154 274 9.22E-25 T 14-10-2018 BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 SMART SM00116 230 277 2.0E-7 T 14-10-2018 IPR000644 CBS domain BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 SMART SM00116 165 213 2.8 T 14-10-2018 IPR000644 CBS domain BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 476 618 1.3E-43 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Pfam PF00571 CBS domain 225 273 5.2E-7 T 14-10-2018 IPR000644 CBS domain BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Pfam PF00571 CBS domain 158 208 1.7E-5 T 14-10-2018 IPR000644 CBS domain BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 Gene3D G3DSA:3.10.580.10 149 309 2.1E-26 T 14-10-2018 BJD94_17025 caed12314e9a76eb8f294a9b384b2c0f 621 SUPERFAMILY SSF51206 11 143 1.44E-13 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_00970 acb9c0a9bfe9ccbd5c173b7d6a9c063e 102 Gene3D G3DSA:1.10.3990.20 8 102 8.7E-32 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily BJD94_00970 acb9c0a9bfe9ccbd5c173b7d6a9c063e 102 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.6E-23 T 14-10-2018 IPR027373 Ribbon-helix-helix domain BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF46785 5 70 1.18E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM00420 6 58 5.8E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF100950 74 234 9.21E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM01134 73 233 2.0E-68 T 14-10-2018 BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.3E-51 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BJD94_17525 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 8.4E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Pfam PF13533 Biotin-lipoyl like 79 108 1.9E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 8.9E-132 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 SUPERFAMILY SSF56954 171 266 3.27E-5 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 8.7E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Gene3D G3DSA:1.20.1600.10 141 273 1.4E-5 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Gene3D G3DSA:2.40.30.170 325 446 1.1E-10 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 SUPERFAMILY SSF111369 66 138 4.05E-6 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Gene3D G3DSA:1.10.287.470 105 124 2.7E-7 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Pfam PF13437 HlyD family secretion protein 316 426 3.4E-18 T 14-10-2018 BJD94_17770 0247f569333bfcfdb6ca114ef794b1e5 463 Gene3D G3DSA:2.40.50.100 69 104 2.7E-7 T 14-10-2018 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 SUPERFAMILY SSF50104 116 165 2.21E-5 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 SMART SM00738 1 101 3.3E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 Gene3D G3DSA:3.30.70.940 1 166 6.3E-52 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 SUPERFAMILY SSF82679 1 104 7.06E-30 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 165 3.9E-62 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 167 46.019 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 BJD94_07090 2ded1b789f02cfd8e97e5f351ece66cd 168 Pfam PF02357 Transcription termination factor nusG 2 94 1.1E-21 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_12015 20a036f2aab2a4a34ab26639c2a0d8a8 230 Pfam PF07356 Protein of unknown function (DUF1481) 32 225 3.6E-59 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 BJD94_12015 20a036f2aab2a4a34ab26639c2a0d8a8 230 PIRSF PIRSF028160 1 230 1.9E-122 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 SUPERFAMILY SSF52418 70 329 9.94E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 Gene3D G3DSA:3.40.1030.10 67 321 3.8E-123 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 2.1E-128 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 Gene3D G3DSA:1.20.970.10 10 183 3.8E-123 T 14-10-2018 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 3.1E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.647 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.4E-103 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_06000 4b4968febb21473a3769bbdb72e21d7b 332 SUPERFAMILY SSF47648 2 67 2.09E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_19660 b51c8803153d4aec69c3c4c656ae38e2 310 Gene3D G3DSA:1.10.3720.10 87 309 2.8E-32 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19660 b51c8803153d4aec69c3c4c656ae38e2 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 1.2E-91 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BJD94_19660 b51c8803153d4aec69c3c4c656ae38e2 310 SUPERFAMILY SSF161098 35 304 5.36E-35 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19660 b51c8803153d4aec69c3c4c656ae38e2 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 7.3E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_15910 d698a8f158470b95d422c475ea53c87c 308 Pfam PF00005 ABC transporter 22 165 9.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_15910 d698a8f158470b95d422c475ea53c87c 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_15910 d698a8f158470b95d422c475ea53c87c 308 Gene3D G3DSA:3.40.50.300 2 241 2.3E-71 T 14-10-2018 BJD94_15910 d698a8f158470b95d422c475ea53c87c 308 SUPERFAMILY SSF52540 4 227 3.22E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15910 d698a8f158470b95d422c475ea53c87c 308 SMART SM00382 30 212 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19780 f9587afa0e9f77ec7d9fb3409db1fa7f 404 Pfam PF10082 Putative beta-barrel porin 2 33 402 2.2E-31 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 BJD94_19780 f9587afa0e9f77ec7d9fb3409db1fa7f 404 SUPERFAMILY SSF56935 164 393 5.49E-5 T 14-10-2018 BJD94_07970 251edaade982140b15590e7ea265760a 170 Pfam PF12019 Type II transport protein GspH 41 148 2.2E-7 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD94_07970 251edaade982140b15590e7ea265760a 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 3.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07970 251edaade982140b15590e7ea265760a 170 Gene3D G3DSA:3.30.700.10 5 143 9.8E-10 T 14-10-2018 BJD94_07970 251edaade982140b15590e7ea265760a 170 PIRSF PIRSF024622 1 170 2.1E-59 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT BJD94_07970 251edaade982140b15590e7ea265760a 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07970 251edaade982140b15590e7ea265760a 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 7.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07970 251edaade982140b15590e7ea265760a 170 SUPERFAMILY SSF54523 5 141 5.65E-13 T 14-10-2018 BJD94_18900 146ad90561781a3ca4f8ef278213d93a 198 Gene3D G3DSA:2.40.50.140 1 71 2.0E-16 T 14-10-2018 BJD94_18900 146ad90561781a3ca4f8ef278213d93a 198 SMART SM00357 4 68 7.1E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_18900 146ad90561781a3ca4f8ef278213d93a 198 SUPERFAMILY SSF50249 3 68 3.67E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_18900 146ad90561781a3ca4f8ef278213d93a 198 Pfam PF06961 Protein of unknown function (DUF1294) 108 162 8.5E-23 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 BJD94_18900 146ad90561781a3ca4f8ef278213d93a 198 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 2.0E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 SUPERFAMILY SSF69055 301 399 5.75E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 9.2E-47 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.793 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 SUPERFAMILY SSF51735 2 150 1.97E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Gene3D G3DSA:1.10.1740.10 312 401 1.2E-27 T 14-10-2018 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.8E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.6E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 Gene3D G3DSA:3.40.50.720 1 150 2.3E-52 T 14-10-2018 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 PIRSF PIRSF006205 1 402 9.1E-153 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 3.8E-163 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD94_00265 ca647e64acc3c1496d26a67bd3dbab2d 402 SUPERFAMILY SSF55347 126 274 9.16E-63 T 14-10-2018 BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 SUPERFAMILY SSF52540 77 363 7.51E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 SMART SM00487 22 225 2.2E-67 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 Pfam PF00271 Helicase conserved C-terminal domain 237 342 7.2E-27 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 Gene3D G3DSA:3.40.50.300 216 417 1.0E-47 T 14-10-2018 BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 Gene3D G3DSA:3.40.50.300 1 214 1.1E-83 T 14-10-2018 BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 SMART SM00490 261 342 4.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_21300 7df3bf49049ecd0f9538c78f2e8c3792 418 Pfam PF00270 DEAD/DEAH box helicase 27 198 9.2E-58 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_19070 1ae68fdf173a148da2e44ea33bd62ccb 550 Pfam PF08019 Domain of unknown function (DUF1705) 60 210 7.3E-49 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BJD94_19070 1ae68fdf173a148da2e44ea33bd62ccb 550 Gene3D G3DSA:3.40.720.10 218 550 1.3E-81 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_19070 1ae68fdf173a148da2e44ea33bd62ccb 550 SUPERFAMILY SSF53649 356 504 7.71E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_19070 1ae68fdf173a148da2e44ea33bd62ccb 550 Pfam PF00884 Sulfatase 242 532 1.4E-41 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_01715 e8bfefb132f6d2837e62e23869d73e8b 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 121 3.0E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD94_01715 e8bfefb132f6d2837e62e23869d73e8b 177 Gene3D G3DSA:1.20.1290.10 11 174 1.4E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD94_01715 e8bfefb132f6d2837e62e23869d73e8b 177 SUPERFAMILY SSF69118 18 173 3.0E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD94_01715 e8bfefb132f6d2837e62e23869d73e8b 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 55 103 8.4E-14 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD94_07875 8918bf6ffc6958dfdd8ad09dec131637 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.846 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 BJD94_07875 8918bf6ffc6958dfdd8ad09dec131637 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.5E-47 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 BJD94_07875 8918bf6ffc6958dfdd8ad09dec131637 129 Gene3D G3DSA:3.30.310.230 2 128 6.8E-43 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.037 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PIRSF PIRSF000722 1 397 7.4E-149 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 Pfam PF00871 Acetokinase family 5 390 1.3E-168 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 7.0E-174 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 Gene3D G3DSA:3.30.420.40 195 397 9.7E-83 T 14-10-2018 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 Gene3D G3DSA:3.30.420.40 2 194 9.5E-76 T 14-10-2018 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 SUPERFAMILY SSF53067 155 395 7.87E-86 T 14-10-2018 BJD94_01780 9d83149a9c0036110362166702ffe4b9 398 SUPERFAMILY SSF53067 3 195 4.01E-66 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82693 46 137 2.14E-18 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82693 146 325 7.32E-9 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82714 719 793 2.75E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.70.1430 46 803 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82714 185 266 6.15E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:1.20.1640.10 502 1013 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.70.1320 139 327 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.2090.10 180 270 4.0E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:1.20.1640.10 16 501 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82866 791 1019 1.96E-50 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.70.1440 659 856 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 SUPERFAMILY SSF82866 293 488 4.05E-36 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 1.0E-161 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.2090.10 708 795 4.0E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 Gene3D G3DSA:3.30.70.1430 559 658 4.0E-257 T 14-10-2018 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_17065 10ff96a28cccd482d2ecffb462ee7e15 1045 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_19575 8bdfd0e8b41619bab9eae3e6b3abc74d 268 Pfam PF13411 MerR HTH family regulatory protein 13 79 9.7E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_19575 8bdfd0e8b41619bab9eae3e6b3abc74d 268 SUPERFAMILY SSF46955 13 105 4.21E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_19575 8bdfd0e8b41619bab9eae3e6b3abc74d 268 SMART SM00422 13 82 1.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_19575 8bdfd0e8b41619bab9eae3e6b3abc74d 268 Gene3D G3DSA:1.10.1660.10 8 80 1.7E-24 T 14-10-2018 BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 4.1E-196 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 Gene3D G3DSA:3.40.50.150 13 363 7.7E-142 T 14-10-2018 BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 368 3.2E-192 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 SUPERFAMILY SSF53335 10 367 2.79E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 Gene3D G3DSA:3.40.1350.30 45 189 7.7E-142 T 14-10-2018 BJD94_11775 7f4bb1a62b55ba109fbecea29e04c79d 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.932 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 Pfam PF00106 short chain dehydrogenase 3 182 8.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 Gene3D G3DSA:3.40.50.720 3 215 1.5E-44 T 14-10-2018 BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05460 97cb14f7afa7623c3f104dc1d9adab3d 241 SUPERFAMILY SSF51735 4 235 1.81E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06390 a9aace98221a65031cdde7c6c52237c1 329 Pfam PF01145 SPFH domain / Band 7 family 26 224 5.4E-23 T 14-10-2018 IPR001107 Band 7 domain BJD94_06390 a9aace98221a65031cdde7c6c52237c1 329 SMART SM00244 22 214 1.2E-17 T 14-10-2018 IPR001107 Band 7 domain BJD94_06390 a9aace98221a65031cdde7c6c52237c1 329 SUPERFAMILY SSF117892 55 219 3.66E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD94_06390 a9aace98221a65031cdde7c6c52237c1 329 TIGRFAM TIGR01932 hflC: HflC protein 8 316 8.9E-72 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BJD94_06390 a9aace98221a65031cdde7c6c52237c1 329 PIRSF PIRSF005651 1 323 7.3E-92 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.717 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.30.63.10 37 96 6.6E-74 T 14-10-2018 BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.2E-76 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 Pfam PF00625 Guanylate kinase 5 185 7.0E-61 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 SUPERFAMILY SSF52540 3 189 2.65E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 SMART SM00072 3 187 2.2E-73 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 8 183 6.6E-74 T 14-10-2018 BJD94_10350 48d5baf2e630c0eb8f97f6577c7a5733 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 SUPERFAMILY SSF53671 4 306 1.57E-101 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.5E-115 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.5E-32 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 8 304 5.1E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 135 292 5.1E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.569 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD94_13205 035c0f4abb63dfff2c2ec8e6dfc3715d 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 SUPERFAMILY SSF101386 3 105 3.93E-24 T 14-10-2018 BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 4.8E-103 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 Gene3D G3DSA:1.10.287.1080 2 126 7.3E-45 T 14-10-2018 BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 SUPERFAMILY SSF101386 138 240 6.54E-24 T 14-10-2018 BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 Gene3D G3DSA:1.10.287.1080 132 264 4.2E-47 T 14-10-2018 BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 7.5E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BJD94_13745 23875b419330019176ddc3ce5d7d7eaa 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 1.8E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 SMART SM00861 354 525 1.1E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Gene3D G3DSA:3.40.50.970 326 537 7.4E-86 T 14-10-2018 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.8E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 SUPERFAMILY SSF52518 333 526 1.06E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 SUPERFAMILY SSF52922 533 664 3.93E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Gene3D G3DSA:3.40.50.970 2 325 1.2E-130 T 14-10-2018 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Gene3D G3DSA:3.40.50.920 538 664 2.0E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 3.5E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 SUPERFAMILY SSF52518 6 319 6.66E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 3.7E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BJD94_13545 65bcb88ca49244376ebb29417193bb32 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD94_00155 708da184beae0313ec2d814fa413d398 222 Pfam PF04391 Protein of unknown function (DUF533) 43 220 1.2E-60 T 14-10-2018 IPR007486 Inner membrane protein YebE BJD94_00155 708da184beae0313ec2d814fa413d398 222 Gene3D G3DSA:1.10.3680.10 95 222 2.0E-10 T 14-10-2018 IPR029024 TerB-like BJD94_00155 708da184beae0313ec2d814fa413d398 222 SUPERFAMILY SSF158682 81 221 7.72E-27 T 14-10-2018 IPR029024 TerB-like BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 SUPERFAMILY SSF46785 2 79 1.7E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 55 1.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 Gene3D G3DSA:1.10.10.10 1 82 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 Pfam PF03466 LysR substrate binding domain 80 281 2.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 Gene3D G3DSA:3.40.190.290 85 270 4.6E-12 T 14-10-2018 BJD94_11040 04a2b1e74e1992b7f4ea850f968d1391 292 SUPERFAMILY SSF53850 81 282 4.71E-26 T 14-10-2018 BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 SUPERFAMILY SSF53850 92 286 2.71E-29 T 14-10-2018 BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 Gene3D G3DSA:3.40.190.290 92 284 3.6E-37 T 14-10-2018 BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 Gene3D G3DSA:1.10.10.10 3 91 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 SUPERFAMILY SSF46785 2 83 1.12E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17380 0326f37bc0fdf470fc661ec02668eed8 286 Pfam PF03466 LysR substrate binding domain 89 285 5.2E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.420.20 102 112 1.0E-9 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Pfam PF11604 Copper binding periplasmic protein CusF 418 484 2.1E-23 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Pfam PF11604 Copper binding periplasmic protein CusF 498 563 3.6E-17 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:1.10.287.470 162 176 1.0E-9 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 391 1.4E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 5.6E-77 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.420.20 325 414 2.0E-23 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 SUPERFAMILY SSF111369 131 323 2.48E-15 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.30.170 246 319 1.8E-25 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.50.100 196 245 1.8E-25 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.50.100 127 161 1.0E-9 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.30.170 113 126 1.0E-9 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.50.320 494 565 5.0E-15 T 14-10-2018 BJD94_16705 38eef1177b69badce397176ac26a7f0a 569 Gene3D G3DSA:2.40.50.320 415 486 2.0E-20 T 14-10-2018 BJD94_08950 aa583823e015ec18967d27eab4bcdf40 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 1.7E-35 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD94_08950 aa583823e015ec18967d27eab4bcdf40 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 1.4E-26 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD94_08950 aa583823e015ec18967d27eab4bcdf40 122 Gene3D G3DSA:3.40.1350.10 13 122 1.3E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BJD94_08950 aa583823e015ec18967d27eab4bcdf40 122 SUPERFAMILY SSF52980 8 112 1.18E-20 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_08950 aa583823e015ec18967d27eab4bcdf40 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.86 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Pfam PF00072 Response regulator receiver domain 760 873 9.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SUPERFAMILY SSF47384 358 439 1.61E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SMART SM00388 373 438 3.2E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SMART SM00448 758 875 3.1E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Gene3D G3DSA:1.10.287.130 336 436 1.3E-26 T 14-10-2018 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Gene3D G3DSA:3.40.50.12330 752 815 4.8E-20 T 14-10-2018 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Gene3D G3DSA:3.40.50.2300 816 880 6.7E-19 T 14-10-2018 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SUPERFAMILY SSF55874 427 604 1.83E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SMART SM00387 485 602 4.2E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Gene3D G3DSA:3.30.565.10 437 606 5.3E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 601 3.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 1.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16295 fc2ca8e0b69c711d012426edea6ea804 881 SUPERFAMILY SSF52172 756 876 1.35E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 1.8E-35 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Pfam PF16331 TolA binding protein trimerisation 50 121 4.5E-25 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Gene3D G3DSA:1.25.40.10 143 260 4.8E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Pfam PF07719 Tetratricopeptide repeat 217 249 1.2E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Pfam PF13432 Tetratricopeptide repeat 155 206 1.0E-8 T 14-10-2018 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Gene3D G3DSA:1.20.5.110 46 120 4.5E-22 T 14-10-2018 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 260 16.966 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 SUPERFAMILY SSF48452 143 256 7.27E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 SMART SM00028 181 214 50.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_01535 a80fbe03f19f50469798944213cbbcd4 260 SMART SM00028 217 250 0.0034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 SUPERFAMILY SSF100950 78 236 6.28E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 SMART SM00420 10 63 6.6E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 SMART SM01134 77 238 3.0E-58 T 14-10-2018 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 65 6.6E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 Gene3D G3DSA:1.10.10.10 2 60 6.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 SUPERFAMILY SSF46785 7 80 2.91E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_04625 cade7752d6b1235a7ed10489e0e843b8 257 Pfam PF00455 DeoR C terminal sensor domain 79 237 3.4E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 SUPERFAMILY SSF50891 1 162 1.15E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 Gene3D G3DSA:2.40.100.10 1 164 5.5E-67 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.0E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BJD94_05335 8c496792a329e70e8ea69ed57ab0c5ab 164 PIRSF PIRSF001467 1 163 2.0E-29 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BJD94_08360 8d7bcb4aeb9bb8e2e23442b216022d18 317 Gene3D G3DSA:3.40.190.10 119 261 4.1E-97 T 14-10-2018 BJD94_08360 8d7bcb4aeb9bb8e2e23442b216022d18 317 SUPERFAMILY SSF53850 33 314 8.31E-65 T 14-10-2018 BJD94_08360 8d7bcb4aeb9bb8e2e23442b216022d18 317 Pfam PF12849 PBP superfamily domain 33 289 4.3E-30 T 14-10-2018 IPR024370 PBP domain BJD94_08360 8d7bcb4aeb9bb8e2e23442b216022d18 317 Gene3D G3DSA:3.40.190.10 34 304 4.1E-97 T 14-10-2018 BJD94_08360 8d7bcb4aeb9bb8e2e23442b216022d18 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 302 7.7E-75 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 BJD94_06755 0cad0ff66f67d0dceed7f491ea622e46 514 Gene3D G3DSA:1.10.275.10 9 203 4.4E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD94_06755 0cad0ff66f67d0dceed7f491ea622e46 514 Gene3D G3DSA:1.20.200.10 204 511 1.4E-103 T 14-10-2018 BJD94_06755 0cad0ff66f67d0dceed7f491ea622e46 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BJD94_06755 0cad0ff66f67d0dceed7f491ea622e46 514 SUPERFAMILY SSF48557 4 511 7.85E-173 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD94_06755 0cad0ff66f67d0dceed7f491ea622e46 514 Pfam PF00221 Aromatic amino acid lyase 16 466 6.6E-163 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BJD94_17495 7d95292b6a8c4aa061543b806c6dbbbd 151 Pfam PF03610 PTS system fructose IIA component 4 116 1.1E-30 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BJD94_17495 7d95292b6a8c4aa061543b806c6dbbbd 151 Gene3D G3DSA:3.40.50.510 1 141 1.0E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BJD94_17495 7d95292b6a8c4aa061543b806c6dbbbd 151 SUPERFAMILY SSF53062 1 126 4.84E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BJD94_18570 21d6657bf017b72e39427cb59c224762 427 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 408 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_18570 21d6657bf017b72e39427cb59c224762 427 Pfam PF02264 LamB porin 33 427 3.5E-84 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_18570 21d6657bf017b72e39427cb59c224762 427 Gene3D G3DSA:2.40.170.10 31 427 2.1E-67 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 BJD94_18570 21d6657bf017b72e39427cb59c224762 427 SUPERFAMILY SSF56935 31 427 3.94E-87 T 14-10-2018 BJD94_01600 8862496a17bbf25b0536fe16813f3e1e 195 Gene3D G3DSA:3.40.50.150 1 194 9.3E-49 T 14-10-2018 BJD94_01600 8862496a17bbf25b0536fe16813f3e1e 195 SUPERFAMILY SSF53335 5 158 2.19E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_01600 8862496a17bbf25b0536fe16813f3e1e 195 Pfam PF13489 Methyltransferase domain 21 135 2.0E-15 T 14-10-2018 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 Gene3D G3DSA:3.40.640.10 58 296 1.6E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 Gene3D G3DSA:3.90.1150.10 40 387 1.6E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.398 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 SUPERFAMILY SSF53383 4 395 3.9E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 6.0E-209 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BJD94_19360 ae0f791ec7720f202d6164c0d4138d13 397 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-76 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 Pfam PF00557 Metallopeptidase family M24 12 271 5.4E-46 T 14-10-2018 IPR000994 Peptidase M24 BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 SUPERFAMILY SSF55920 3 280 2.36E-81 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 Gene3D G3DSA:3.90.230.10 1 290 2.0E-103 T 14-10-2018 BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 4.3E-82 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD94_00230 d20d5dc8a7aa150ca582a1a1e0dc3bad 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.583 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.4E-74 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 242 15.807 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BJD94_10610 931559e1595cce672d605f0f9b178b67 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.9E-66 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 3.1E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 3.1E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 3.1E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_10610 931559e1595cce672d605f0f9b178b67 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 3.1E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 SUPERFAMILY SSF55031 181 291 5.08E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 Gene3D G3DSA:3.40.630.10 9 364 5.6E-127 T 14-10-2018 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.102 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.0E-45 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 SUPERFAMILY SSF53187 6 376 3.01E-66 T 14-10-2018 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 Gene3D G3DSA:3.30.70.360 181 294 5.6E-127 T 14-10-2018 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 2.4E-179 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BJD94_00500 425d67f35e2a3ef565d5f289b70027a0 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.3E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 SUPERFAMILY SSF47336 2 76 1.27E-23 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.0E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 Gene3D G3DSA:1.10.1200.10 1 75 1.8E-29 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.7E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD94_05710 43621eecd528fb806cc89fdcfb97de2a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.776 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Pfam PF02142 MGS-like domain 19 132 8.2E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Gene3D G3DSA:3.40.140.20 394 530 1.5E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Gene3D G3DSA:3.40.140.20 220 375 2.9E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 SMART SM00798 137 462 7.0E-218 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 6.1E-119 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 SUPERFAMILY SSF53927 222 530 6.32E-131 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 SMART SM00851 19 132 2.1E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 SUPERFAMILY SSF52335 7 197 4.06E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 PIRSF PIRSF000414 1 530 1.4E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.927 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 Gene3D G3DSA:3.40.50.1380 1 200 7.3E-88 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_12025 560c3afb0238415e3fc406a345e5b0e3 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 3.1E-261 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.2E-84 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 PIRSF PIRSF015601 2 242 4.1E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 SUPERFAMILY SSF75217 75 242 4.36E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 Gene3D G3DSA:3.40.1280.10 74 243 6.4E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 SUPERFAMILY SSF88697 2 70 2.98E-16 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 Pfam PF04452 RNA methyltransferase 20 236 8.4E-75 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD94_13515 140d885a4c481d8e7301aab7b649a0ad 243 Gene3D G3DSA:2.40.240.20 1 70 4.7E-21 T 14-10-2018 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.1E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 5 256 3.99E-92 T 14-10-2018 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.8E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 9.1E-227 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 255 497 6.29E-85 T 14-10-2018 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 PIRSF PIRSF000538 4 502 6.0E-175 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 255 500 6.6E-93 T 14-10-2018 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 2 254 3.8E-111 T 14-10-2018 BJD94_14710 9c0b01d35eddd095aaa003f6766b3ffc 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.985 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 SUPERFAMILY SSF53167 3 234 3.53E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.793 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-120 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 Pfam PF01048 Phosphorylase superfamily 15 220 9.4E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_14460 79ae2d9e7a33254e32c8c3c080e945a5 239 Gene3D G3DSA:3.40.50.1580 1 237 1.7E-76 T 14-10-2018 BJD94_10615 5dd99eefb1c4fbcffc12faeea924b862 122 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 32 50 1.1E-12 T 14-10-2018 BJD94_10615 5dd99eefb1c4fbcffc12faeea924b862 122 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 13 32 1.1E-12 T 14-10-2018 BJD94_10615 5dd99eefb1c4fbcffc12faeea924b862 122 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 1 72 7.3E-27 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 PIRSF PIRSF000485 1 480 3.1E-169 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.40.50.2020 276 440 1.6E-159 T 14-10-2018 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 3.5E-17 T 14-10-2018 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF53271 249 482 3.15E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 Pfam PF00156 Phosphoribosyl transferase domain 280 391 2.5E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.854 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF56235 2 256 7.98E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 2.2E-165 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD94_00890 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.60.20.10 2 411 1.6E-159 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF03462 PCRF domain 13 205 8.6E-76 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 SMART SM00937 67 180 3.4E-67 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.9E-170 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:1.20.58.410 3 104 1.3E-8 T 14-10-2018 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.70.1660 115 343 2.2E-95 T 14-10-2018 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.160.20 212 293 2.2E-95 T 14-10-2018 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF00472 RF-1 domain 218 323 5.2E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.924 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BJD94_07460 10730ca2cb1a85e0814ea4b0fc3a007a 362 SUPERFAMILY SSF75620 12 355 4.84E-137 T 14-10-2018 BJD94_17500 e642582527fab172d603f57763cba770 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 5.2E-90 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.865 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.4E-41 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 8.9E-44 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 SUPERFAMILY SSF55347 127 236 1.72E-37 T 14-10-2018 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 PIRSF PIRSF000161 1 268 9.8E-91 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 SUPERFAMILY SSF51735 1 268 2.6E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 Gene3D G3DSA:3.40.50.720 3 264 1.0E-102 T 14-10-2018 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.7E-99 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_08845 981d3dbd4057a34639855fe9fca6e293 269 Gene3D G3DSA:3.30.360.10 127 234 1.0E-102 T 14-10-2018 BJD94_05785 c4d27b17c72f739e0b8501491579c53b 359 Gene3D G3DSA:3.40.50.300 79 336 2.4E-82 T 14-10-2018 BJD94_05785 c4d27b17c72f739e0b8501491579c53b 359 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 334 35.668 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BJD94_05785 c4d27b17c72f739e0b8501491579c53b 359 SUPERFAMILY SSF52540 89 321 1.62E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05785 c4d27b17c72f739e0b8501491579c53b 359 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 4.5E-97 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BJD94_05785 c4d27b17c72f739e0b8501491579c53b 359 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 BJD94_01685 0d0017bc0c07d72fcc8bfc220fbe35c2 129 Gene3D G3DSA:3.10.450.50 1 129 3.8E-33 T 14-10-2018 BJD94_01685 0d0017bc0c07d72fcc8bfc220fbe35c2 129 SUPERFAMILY SSF54427 1 123 4.15E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily BJD94_01685 0d0017bc0c07d72fcc8bfc220fbe35c2 129 Pfam PF12680 SnoaL-like domain 7 102 9.8E-9 T 14-10-2018 IPR037401 SnoaL-like domain BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 SUPERFAMILY SSF53732 20 600 1.83E-185 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Gene3D G3DSA:3.30.499.10 367 570 1.6E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Pfam PF00694 Aconitase C-terminal domain 665 796 1.7E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 864 3.1E-286 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Pfam PF00330 Aconitase family (aconitate hydratase) 79 542 5.1E-145 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Gene3D G3DSA:3.30.499.20 16 366 2.6E-129 T 14-10-2018 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 11 866 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 276 289 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 369 383 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 473 486 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 147 160 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 214 229 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 411 422 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 200 213 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 171 179 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 PRINTS PR00415 Aconitase family signature 290 303 1.1E-25 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Gene3D G3DSA:1.10.1440.20 571 627 4.4E-10 T 14-10-2018 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 Gene3D G3DSA:3.20.19.10 628 866 1.7E-83 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD94_04535 518d0415e4fb9751cf867c3a469ca8d3 871 SUPERFAMILY SSF52016 607 865 6.67E-68 T 14-10-2018 BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 SUPERFAMILY SSF54523 17 138 3.19E-17 T 14-10-2018 BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 35 7.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 Gene3D G3DSA:3.30.700.10 18 144 2.3E-19 T 14-10-2018 BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 122 2.4E-17 T 14-10-2018 IPR031982 Type IV minor pilin ComP BJD94_07975 9c1640e83cd0d604be03a4cd642cc8ee 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 37 2.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Gene3D G3DSA:3.10.450.350 174 409 3.7E-80 T 14-10-2018 BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 SUPERFAMILY SSF51261 146 391 4.66E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Gene3D G3DSA:3.10.450.350 70 161 1.9E-12 T 14-10-2018 BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Gene3D G3DSA:2.70.70.10 267 396 3.7E-80 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 153 7.0E-5 T 14-10-2018 IPR007340 Opacity-associated protein A BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Pfam PF01551 Peptidase family M23 296 390 8.9E-31 T 14-10-2018 IPR016047 Peptidase M23 BJD94_14235 890ac9181c23ad5675da67d54ccd3858 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 8.4E-6 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal BJD94_09250 aeae7e909ee56d74863e059457c27b08 330 PIRSF PIRSF031853 1 330 5.6E-96 T 14-10-2018 IPR016984 Uncharacterised conserved protein UCP031853 BJD94_09250 aeae7e909ee56d74863e059457c27b08 330 Pfam PF04471 Restriction endonuclease 193 305 2.9E-24 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 BJD94_09250 aeae7e909ee56d74863e059457c27b08 330 SUPERFAMILY SSF52980 196 310 6.43E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_09250 aeae7e909ee56d74863e059457c27b08 330 Gene3D G3DSA:3.40.91.100 158 325 8.8E-6 T 14-10-2018 BJD94_15455 fcfb658e7fa5c685336bedfebf90a1f3 305 Gene3D G3DSA:3.20.20.70 8 304 8.9E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_15455 fcfb658e7fa5c685336bedfebf90a1f3 305 SUPERFAMILY SSF51569 10 298 2.01E-69 T 14-10-2018 BJD94_15455 fcfb658e7fa5c685336bedfebf90a1f3 305 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 240 249 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 BJD94_15455 fcfb658e7fa5c685336bedfebf90a1f3 305 Pfam PF00682 HMGL-like 15 283 7.2E-50 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF03466 LysR substrate binding domain 90 285 4.2E-44 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF53850 90 286 2.17E-39 T 14-10-2018 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 92 277 1.5E-37 T 14-10-2018 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 165 268 1.5E-37 T 14-10-2018 BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:1.10.10.10 3 89 9.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF46785 3 111 4.61E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21330 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 Gene3D G3DSA:3.30.70.1450 206 279 2.7E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 Gene3D G3DSA:3.30.70.1450 289 360 4.5E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 SUPERFAMILY SSF116726 206 283 1.31E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 SUPERFAMILY SSF116726 290 349 1.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 Pfam PF03600 Citrate transporter 32 518 1.7E-25 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_09695 919dbba6a6f8fc50ffa1396d1644fcf1 574 Pfam PF02080 TrkA-C domain 209 276 8.6E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_11055 60fdd465755e7cc3c35022f486ae0c45 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 232 3.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_11055 60fdd465755e7cc3c35022f486ae0c45 238 Gene3D G3DSA:1.10.3720.10 25 234 2.8E-55 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11055 60fdd465755e7cc3c35022f486ae0c45 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 30 128 1.5E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_11055 60fdd465755e7cc3c35022f486ae0c45 238 SUPERFAMILY SSF161098 33 219 3.27E-46 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20495 cf39906d5b9e3b3c508e9c8bb738b9d4 332 Gene3D G3DSA:3.40.630.10 14 330 1.1E-69 T 14-10-2018 BJD94_20495 cf39906d5b9e3b3c508e9c8bb738b9d4 332 SUPERFAMILY SSF53187 38 330 3.11E-51 T 14-10-2018 BJD94_20495 cf39906d5b9e3b3c508e9c8bb738b9d4 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 328 6.6E-74 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_20495 cf39906d5b9e3b3c508e9c8bb738b9d4 332 PIRSF PIRSF039012 6 332 3.3E-100 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 SMART SM00448 2 112 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 SUPERFAMILY SSF52172 1 125 5.83E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 Gene3D G3DSA:3.40.50.12740 2 202 4.0E-53 T 14-10-2018 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 SUPERFAMILY SSF46894 125 198 4.08E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_15520 1167604881490a3c70c119d68c8ccf4e 202 SMART SM00421 140 197 2.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 Pfam PF02501 Type II secretion system (T2SS), protein I 43 118 5.7E-23 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 Gene3D G3DSA:3.30.1300.30 33 120 9.1E-39 T 14-10-2018 BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 SUPERFAMILY SSF54523 40 118 6.67E-24 T 14-10-2018 BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 4.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10455 76489e179467e7983a1ba36fd0037b6c 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 106 2.3E-36 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 BJD94_14960 a792124336e260ef21bfc5303034ed43 322 SUPERFAMILY SSF161098 106 298 1.44E-23 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14960 a792124336e260ef21bfc5303034ed43 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 302 1.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14960 a792124336e260ef21bfc5303034ed43 322 Gene3D G3DSA:1.10.3720.10 105 306 9.3E-20 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.7E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.7E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.7E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.7E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.4E-167 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 Gene3D G3DSA:3.20.20.10 35 277 5.4E-152 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 Gene3D G3DSA:2.40.37.10 17 404 5.4E-152 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 SUPERFAMILY SSF51419 27 284 2.75E-82 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.028 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 SUPERFAMILY SSF50621 261 414 1.61E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 6.9E-73 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 5.0E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BJD94_11575 7d9aefdb9b961c8fcde7400fd026113f 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BJD94_00695 facc95e6baec74889acbb896f28871d5 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.608 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_00695 facc95e6baec74889acbb896f28871d5 376 Gene3D G3DSA:3.40.50.180 183 372 1.3E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_00695 facc95e6baec74889acbb896f28871d5 376 Gene3D G3DSA:3.40.50.2300 2 130 6.7E-31 T 14-10-2018 BJD94_00695 facc95e6baec74889acbb896f28871d5 376 SUPERFAMILY SSF52172 2 109 1.42E-26 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00695 facc95e6baec74889acbb896f28871d5 376 SMART SM00448 3 126 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00695 facc95e6baec74889acbb896f28871d5 376 SUPERFAMILY SSF52738 185 370 1.7E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_00695 facc95e6baec74889acbb896f28871d5 376 Pfam PF00072 Response regulator receiver domain 5 109 6.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00695 facc95e6baec74889acbb896f28871d5 376 Pfam PF01339 CheB methylesterase 191 368 4.8E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_00695 facc95e6baec74889acbb896f28871d5 376 PIRSF PIRSF000876 1 374 2.2E-126 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 SUPERFAMILY SSF52540 189 392 3.02E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 Pfam PF00448 SRP54-type protein, GTPase domain 192 391 4.5E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 119 392 65.184 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 119 391 3.2E-116 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 SMART SM00382 190 370 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 SUPERFAMILY SSF47364 91 170 1.07E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 Gene3D G3DSA:3.40.50.300 187 380 8.8E-118 T 14-10-2018 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 Gene3D G3DSA:1.20.120.140 93 390 8.8E-118 T 14-10-2018 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 SMART SM00962 191 392 1.1E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 SMART SM00963 96 176 2.0E-26 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 365 378 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_11700 87e0ac612c42f324cd82f7c93adffbdd 395 Pfam PF02881 SRP54-type protein, helical bundle domain 111 172 7.6E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Pfam PF01103 Surface antigen 448 804 2.2E-89 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:3.10.20.310 264 346 3.9E-14 T 14-10-2018 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:3.10.20.310 18 91 3.9E-20 T 14-10-2018 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.4E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Pfam PF07244 Surface antigen variable number repeat 176 263 2.5E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Pfam PF07244 Surface antigen variable number repeat 92 172 3.5E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.2E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 8.2E-279 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:3.10.20.310 175 263 2.3E-22 T 14-10-2018 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:2.40.160.50 425 804 2.0E-121 T 14-10-2018 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.76 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:3.10.20.310 347 424 6.6E-26 T 14-10-2018 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 PIRSF PIRSF006076 1 804 2.8E-245 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD94_00275 884fa2984e2177890e9dc5d3ee9ce063 804 Gene3D G3DSA:3.10.20.310 92 174 1.4E-17 T 14-10-2018 BJD94_15815 065e2d04beb537d7f326642e91d4ce0b 339 SUPERFAMILY SSF56935 22 338 6.02E-45 T 14-10-2018 BJD94_15815 065e2d04beb537d7f326642e91d4ce0b 339 Gene3D G3DSA:2.40.160.10 22 339 9.4E-45 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 Gene3D G3DSA:1.25.40.10 273 384 1.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SUPERFAMILY SSF48452 262 390 4.17E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SUPERFAMILY SSF55073 481 637 1.96E-38 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 472 638 3.9E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 Gene3D G3DSA:3.30.70.270 461 639 1.2E-46 T 14-10-2018 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 Gene3D G3DSA:1.25.40.10 91 265 2.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 355 388 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 153 186 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 113 146 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 315 348 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 275 308 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00028 193 226 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SUPERFAMILY SSF48452 112 236 5.06E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04190 3f220d24f8b501bd64b541153cffbbdd 639 SMART SM00267 465 639 1.2E-48 T 14-10-2018 IPR000160 GGDEF domain BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 Gene3D G3DSA:3.30.450.20 34 182 3.8E-30 T 14-10-2018 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 8.3E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 8.3E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 8.3E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 503 7.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 SMART SM00283 277 538 3.5E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 Gene3D G3DSA:1.10.287.950 218 540 3.1E-65 T 14-10-2018 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 SMART SM01049 30 124 2.4E-17 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 Pfam PF17200 Single Cache domain 2 36 185 5.0E-33 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_13410 b08eeda2cd1f148a91e35d518022f3f2 541 SUPERFAMILY SSF58104 243 539 1.02E-69 T 14-10-2018 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 SUPERFAMILY SSF47807 164 254 4.34E-17 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 159 8.1E-32 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 SUPERFAMILY SSF88723 4 164 1.03E-38 T 14-10-2018 IPR029060 PIN-like domain superfamily BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 46.257 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 Gene3D G3DSA:3.40.50.1010 1 166 1.7E-51 T 14-10-2018 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 SMART SM00475 3 254 1.8E-64 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 SMART SM00279 167 202 5.6E-8 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 1.0E-18 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BJD94_07765 b170e5ac490cc92f45b6ac600db87461 259 Gene3D G3DSA:1.10.150.20 167 255 1.5E-17 T 14-10-2018 BJD94_08880 6296f3af3967adfbbff7def26143758c 255 Gene3D G3DSA:3.10.20.310 55 123 6.5E-25 T 14-10-2018 BJD94_08880 6296f3af3967adfbbff7def26143758c 255 Gene3D G3DSA:3.40.50.11690 125 252 5.3E-37 T 14-10-2018 BJD94_08880 6296f3af3967adfbbff7def26143758c 255 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.339 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 BJD94_08880 6296f3af3967adfbbff7def26143758c 255 Pfam PF03799 Cell division protein FtsQ 127 239 2.2E-24 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB BJD94_08880 6296f3af3967adfbbff7def26143758c 255 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.3E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Gene3D G3DSA:1.10.287.730 143 169 6.2E-13 T 14-10-2018 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Gene3D G3DSA:3.30.70.1170 170 227 4.2E-26 T 14-10-2018 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Gene3D G3DSA:1.10.940.10 1 142 1.3E-43 T 14-10-2018 IPR035926 NusB-like superfamily BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Pfam PF01029 NusB family 1 123 4.2E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 6.2E-153 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 7.7E-69 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 SUPERFAMILY SSF53335 139 424 6.54E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.9E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.9E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.9E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.9E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.9E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 SUPERFAMILY SSF48013 1 146 2.13E-36 T 14-10-2018 IPR035926 NusB-like superfamily BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 Gene3D G3DSA:3.40.50.150 228 425 1.1E-69 T 14-10-2018 BJD94_10955 4fffb2b9ec34e5b559299122d6c60acb 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BJD94_07390 56f4f0b3686fb881193d6a0a8451d403 286 Pfam PF01963 TraB family 23 275 1.0E-60 T 14-10-2018 IPR002816 Pheromone shutdown, TraB BJD94_14495 b65f60ec1bb49a515e989f77c594e22d 307 Gene3D G3DSA:3.40.50.1000 109 270 5.1E-21 T 14-10-2018 IPR023214 HAD superfamily BJD94_14495 b65f60ec1bb49a515e989f77c594e22d 307 SUPERFAMILY SSF56784 35 249 4.49E-14 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_14495 b65f60ec1bb49a515e989f77c594e22d 307 Pfam PF12710 haloacid dehalogenase-like hydrolase 40 232 1.3E-12 T 14-10-2018 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 Pfam PF01235 Sodium:alanine symporter family 96 500 2.5E-133 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 492 3.0E-122 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 265 284 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 355 373 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 132 154 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 237 255 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 400 422 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_02185 b478a47f38d3f2977cf77a901674e056 515 PRINTS PR00175 Sodium/alanine symporter signature 461 481 5.3E-47 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_12445 81f69660334f07b7821b1730bada8d5d 468 SUPERFAMILY SSF51556 85 383 7.21E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_12445 81f69660334f07b7821b1730bada8d5d 468 Pfam PF01979 Amidohydrolase family 82 430 1.9E-68 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_12445 81f69660334f07b7821b1730bada8d5d 468 Gene3D G3DSA:3.20.20.140 86 375 4.4E-145 T 14-10-2018 BJD94_12445 81f69660334f07b7821b1730bada8d5d 468 Gene3D G3DSA:2.30.40.10 36 449 4.4E-145 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_12445 81f69660334f07b7821b1730bada8d5d 468 SUPERFAMILY SSF51338 28 454 3.46E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Gene3D G3DSA:3.30.830.10 28 251 9.3E-58 T 14-10-2018 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Gene3D G3DSA:3.30.830.10 507 716 1.9E-12 T 14-10-2018 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 SUPERFAMILY SSF63411 26 237 4.71E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Pfam PF00675 Insulinase (Peptidase family M16) 49 160 8.4E-25 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Gene3D G3DSA:3.30.830.10 254 461 6.5E-8 T 14-10-2018 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Pfam PF05193 Peptidase M16 inactive domain 669 847 3.4E-6 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Pfam PF05193 Peptidase M16 inactive domain 198 374 5.1E-14 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 Gene3D G3DSA:3.30.830.10 740 914 5.1E-13 T 14-10-2018 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 SUPERFAMILY SSF63411 496 718 1.16E-24 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_18420 0836745ec687b6e82464ce2953bdc497 915 SUPERFAMILY SSF63411 758 904 1.2E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 SUPERFAMILY SSF46785 1 60 5.41E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 5.2E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.0E-18 T 14-10-2018 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 Gene3D G3DSA:3.30.70.920 55 137 9.8E-21 T 14-10-2018 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 SUPERFAMILY SSF54909 63 145 8.18E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.0E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.0E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.0E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 Gene3D G3DSA:1.10.10.10 1 54 3.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 SMART SM00344 1 110 2.6E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_18350 1d16f43c14f9f343c6627266c62cf9c1 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD94_19845 e390fb8f8911b1533b43649c61613910 387 SUPERFAMILY SSF55073 230 383 1.8E-48 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19845 e390fb8f8911b1533b43649c61613910 387 SMART SM00267 214 384 2.5E-57 T 14-10-2018 IPR000160 GGDEF domain BJD94_19845 e390fb8f8911b1533b43649c61613910 387 Gene3D G3DSA:3.30.70.270 216 384 2.5E-54 T 14-10-2018 BJD94_19845 e390fb8f8911b1533b43649c61613910 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 381 3.8E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_19845 e390fb8f8911b1533b43649c61613910 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 4.5E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_11550 80827e59f393989a2f8bd40359058fa9 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 227 1.6E-36 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11550 80827e59f393989a2f8bd40359058fa9 243 Gene3D G3DSA:3.40.50.10090 4 240 1.8E-71 T 14-10-2018 BJD94_11550 80827e59f393989a2f8bd40359058fa9 243 SUPERFAMILY SSF69618 1 241 4.05E-55 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD94_11550 80827e59f393989a2f8bd40359058fa9 243 Gene3D G3DSA:3.40.50.10090 32 161 1.8E-71 T 14-10-2018 BJD94_05775 fffabf0512421a4498d8d444263fd4dd 702 Pfam PF05170 AsmA family 1 593 7.0E-121 T 14-10-2018 IPR007844 AsmA BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 SUPERFAMILY SSF52402 6 209 2.0E-74 T 14-10-2018 BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 PIRSF PIRSF002936 1 302 1.2E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 Gene3D G3DSA:3.40.50.620 7 212 3.5E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.02 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD94_09705 3c299c74ea82d68fe276df747e0ca3d3 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 8.6E-65 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BJD94_00105 40f053e68f4825e842bdacd7eb54ca74 324 PIRSF PIRSF006268 2 322 8.7E-95 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BJD94_00105 40f053e68f4825e842bdacd7eb54ca74 324 Pfam PF02424 ApbE family 20 299 1.6E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BJD94_00105 40f053e68f4825e842bdacd7eb54ca74 324 SUPERFAMILY SSF143631 12 321 1.73E-100 T 14-10-2018 IPR003374 ApbE-like superfamily BJD94_00105 40f053e68f4825e842bdacd7eb54ca74 324 Gene3D G3DSA:3.10.520.20 5 324 2.2E-113 T 14-10-2018 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.1140.32 108 208 3.1E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 6.5E-42 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.991 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54821 108 206 7.72E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-98 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 Pfam PF07650 KH domain 38 111 4.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.300.20 17 107 5.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_09850 5bebf174d373222397797f0f6845fcb8 233 SMART SM00322 60 125 7.4E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 SUPERFAMILY SSF52210 239 385 9.42E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Pfam PF00549 CoA-ligase 262 382 1.2E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Gene3D G3DSA:3.30.470.20 1 234 8.5E-92 T 14-10-2018 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.397 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Gene3D G3DSA:3.30.1490.20 21 104 8.5E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 PIRSF PIRSF001554 1 388 5.2E-155 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Gene3D G3DSA:3.40.50.261 240 388 8.0E-58 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 Pfam PF08442 ATP-grasp domain 2 203 3.4E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 SUPERFAMILY SSF56059 1 238 3.01E-79 T 14-10-2018 BJD94_06955 c1def99d0cdf71d3acc0df522b5a3d8e 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 7.7E-174 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 73 126 1.3E-11 T 14-10-2018 IPR000644 CBS domain BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 6 61 5.2E-6 T 14-10-2018 IPR000644 CBS domain BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 SUPERFAMILY SSF54631 2 126 3.79E-30 T 14-10-2018 BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 Gene3D G3DSA:3.10.580.10 1 135 1.5E-28 T 14-10-2018 BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 80 127 5.2E-7 T 14-10-2018 IPR000644 CBS domain BJD94_01045 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 13 61 1.4 T 14-10-2018 IPR000644 CBS domain BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 243 274 0.022 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 192 223 130.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 63 94 8.4E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 280 312 27.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 146 178 5.2E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 322 353 1.2 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 SMART SM00564 107 138 0.028 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD94_08165 711274655d913709c9d93327e1feb611 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 3.8E-141 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB BJD94_08165 711274655d913709c9d93327e1feb611 386 SUPERFAMILY SSF50998 31 376 8.63E-83 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD94_08165 711274655d913709c9d93327e1feb611 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.981 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB BJD94_08165 711274655d913709c9d93327e1feb611 386 Gene3D G3DSA:2.130.10.10 18 385 1.3E-99 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_08165 711274655d913709c9d93327e1feb611 386 Pfam PF13360 PQQ-like domain 76 311 2.4E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD94_04220 88d5f25f29a34ebe18b2e1c650916a93 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 2.2E-53 T 14-10-2018 BJD94_04220 88d5f25f29a34ebe18b2e1c650916a93 266 SUPERFAMILY SSF53850 19 225 8.76E-21 T 14-10-2018 BJD94_04220 88d5f25f29a34ebe18b2e1c650916a93 266 Gene3D G3DSA:3.40.190.10 23 232 6.0E-37 T 14-10-2018 BJD94_04220 88d5f25f29a34ebe18b2e1c650916a93 266 Gene3D G3DSA:3.40.190.10 102 202 6.0E-37 T 14-10-2018 BJD94_20730 76a3e3c2f0f9eb5f5d30f6fabebad361 224 SMART SM00448 2 115 1.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20730 76a3e3c2f0f9eb5f5d30f6fabebad361 224 SUPERFAMILY SSF52172 1 132 5.41E-28 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20730 76a3e3c2f0f9eb5f5d30f6fabebad361 224 Gene3D G3DSA:3.40.50.12740 2 203 6.8E-25 T 14-10-2018 BJD94_20730 76a3e3c2f0f9eb5f5d30f6fabebad361 224 PIRSF PIRSF006171 1 222 2.7E-65 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BJD94_20730 76a3e3c2f0f9eb5f5d30f6fabebad361 224 Pfam PF00072 Response regulator receiver domain 4 114 2.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 3 206 31.658 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Gene3D G3DSA:1.10.150.20 69 145 9.8E-26 T 14-10-2018 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 SUPERFAMILY SSF50249 4 65 9.14E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 205 4.1E-65 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Pfam PF07499 RuvA, C-terminal domain 162 205 1.3E-15 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Pfam PF14520 Helix-hairpin-helix domain 74 132 5.1E-15 T 14-10-2018 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Pfam PF01330 RuvA N terminal domain 4 64 1.3E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Gene3D G3DSA:2.40.50.140 3 67 1.8E-27 T 14-10-2018 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 SUPERFAMILY SSF47781 68 139 7.23E-20 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 Gene3D G3DSA:1.10.8.10 159 206 1.0E-22 T 14-10-2018 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 SMART SM00278 75 94 180.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 SMART SM00278 110 129 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD94_01475 56e87ceb2ec8a08cc52524ba60b91af2 206 SUPERFAMILY SSF46929 160 205 5.89E-12 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily BJD94_14590 19f70ba1cd908e2443fb54d0c0a3b8c1 383 Pfam PF02417 Chromate transporter 5 171 2.0E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BJD94_14590 19f70ba1cd908e2443fb54d0c0a3b8c1 383 Pfam PF02417 Chromate transporter 214 375 1.1E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BJD94_14590 19f70ba1cd908e2443fb54d0c0a3b8c1 383 PIRSF PIRSF004810 1 383 3.8E-122 T 14-10-2018 IPR014047 Chromate transporter, long chain BJD94_14590 19f70ba1cd908e2443fb54d0c0a3b8c1 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 11 377 3.9E-94 T 14-10-2018 IPR014047 Chromate transporter, long chain BJD94_00290 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Pfam PF07977 FabA-like domain 17 141 1.7E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_00290 2fdb0eb0b60f7bd55d38061cbdf4e589 150 SUPERFAMILY SSF54637 7 146 5.89E-49 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_00290 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Gene3D G3DSA:3.10.129.10 2 150 2.8E-61 T 14-10-2018 BJD94_00290 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.549 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_00290 2fdb0eb0b60f7bd55d38061cbdf4e589 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.9E-60 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_16920 9402973e46557e3e18c6135525d1e953 309 Gene3D G3DSA:3.40.1190.20 3 308 3.1E-77 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16920 9402973e46557e3e18c6135525d1e953 309 SUPERFAMILY SSF53613 6 301 8.42E-71 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16920 9402973e46557e3e18c6135525d1e953 309 Pfam PF00294 pfkB family carbohydrate kinase 6 304 1.2E-56 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_16920 9402973e46557e3e18c6135525d1e953 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 SUPERFAMILY SSF55653 60 149 1.31E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.6E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 SUPERFAMILY SSF55658 1 57 1.52E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 5.3E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 Gene3D G3DSA:3.40.5.10 1 50 5.0E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.269 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.5E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12845 2e4695867b752e06eb7142a7866b9179 149 Gene3D G3DSA:3.10.430.100 61 149 7.0E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 SUPERFAMILY SSF64383 178 310 3.14E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 306 2.3E-86 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 Gene3D G3DSA:3.30.1400.10 176 314 5.0E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 SMART SM00771 176 306 6.6E-70 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 178 305 1.9E-46 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 179 314 2.0E-76 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD94_07205 acf8c77a4a844f67736c2e80b3aab74e 314 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 308 22.284 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 582 28.099 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Gene3D G3DSA:3.30.1360.70 4 111 1.7E-33 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 12 92 2.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Pfam PF00750 tRNA synthetases class I (R) 103 452 2.3E-162 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Gene3D G3DSA:3.40.50.620 113 459 4.2E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 SUPERFAMILY SSF52374 115 459 1.79E-93 T 14-10-2018 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 582 1.2E-199 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 3.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 3.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 309 330 3.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 3.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 SUPERFAMILY SSF47323 460 582 1.83E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Gene3D G3DSA:1.10.730.10 460 582 1.0E-35 T 14-10-2018 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 SUPERFAMILY SSF55190 5 101 5.1E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 Pfam PF05746 DALR anticodon binding domain 466 582 3.8E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 SMART SM01016 10 92 3.2E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_06905 d829387c0f62db3af2b0d2f22951204a 582 SMART SM00836 466 582 2.1E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 SUPERFAMILY SSF51215 35 174 4.71E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 SUPERFAMILY SSF46689 243 292 1.25E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 Gene3D G3DSA:2.60.120.280 41 149 3.5E-9 T 14-10-2018 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 Gene3D G3DSA:1.10.10.60 188 294 4.4E-26 T 14-10-2018 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 Pfam PF12833 Helix-turn-helix domain 214 291 1.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_21730 993e741beb397cbd9ad413ce6096d595 294 SMART SM00342 207 290 4.4E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_01985 60200102d4c1fe66af891a7aa12bb35c 571 SMART SM00052 343 571 3.1E-15 T 14-10-2018 IPR001633 EAL domain BJD94_01985 60200102d4c1fe66af891a7aa12bb35c 571 SUPERFAMILY SSF141868 351 567 2.09E-46 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01985 60200102d4c1fe66af891a7aa12bb35c 571 Gene3D G3DSA:3.20.20.450 352 570 2.2E-46 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01985 60200102d4c1fe66af891a7aa12bb35c 571 Pfam PF00563 EAL domain 357 567 6.4E-40 T 14-10-2018 IPR001633 EAL domain BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 SUPERFAMILY SSF46785 4 113 1.4E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 Gene3D G3DSA:3.40.190.290 89 296 3.5E-65 T 14-10-2018 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.6E-106 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 Gene3D G3DSA:1.10.10.10 2 85 3.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 SUPERFAMILY SSF53850 95 295 4.52E-21 T 14-10-2018 BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 Pfam PF03466 LysR substrate binding domain 95 278 3.0E-12 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_13580 99e6249f23f08efe7e6175a07c42f089 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.73 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 Gene3D G3DSA:1.20.1250.20 6 416 4.2E-24 T 14-10-2018 BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 Pfam PF01553 Acyltransferase 436 564 4.4E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 SUPERFAMILY SSF103473 40 423 1.57E-23 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 SUPERFAMILY SSF69593 372 617 3.01E-33 T 14-10-2018 BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 SMART SM00563 451 567 6.0E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_16480 51c0952d5b1e34fdd18c39e1d91b1324 623 Pfam PF07690 Major Facilitator Superfamily 47 380 4.0E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_18205 99f3b8d8d4b98bf11685b5bd93a1d4f3 606 Gene3D G3DSA:3.20.20.80 3 166 1.5E-22 T 14-10-2018 BJD94_18205 99f3b8d8d4b98bf11685b5bd93a1d4f3 606 Gene3D G3DSA:3.20.20.80 241 465 1.4E-41 T 14-10-2018 BJD94_18205 99f3b8d8d4b98bf11685b5bd93a1d4f3 606 SMART SM00642 20 491 1.7E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18205 99f3b8d8d4b98bf11685b5bd93a1d4f3 606 Pfam PF00128 Alpha amylase, catalytic domain 58 437 5.1E-22 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_18205 99f3b8d8d4b98bf11685b5bd93a1d4f3 606 SUPERFAMILY SSF51445 13 497 1.7E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_01040 a7508bea8127634278d592618d09ebee 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 321 2.3E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_01040 a7508bea8127634278d592618d09ebee 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 324 2.0E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_01040 a7508bea8127634278d592618d09ebee 328 SMART SM00267 149 326 1.9E-46 T 14-10-2018 IPR000160 GGDEF domain BJD94_01040 a7508bea8127634278d592618d09ebee 328 SUPERFAMILY SSF55073 165 326 4.32E-39 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01040 a7508bea8127634278d592618d09ebee 328 Gene3D G3DSA:3.30.450.20 20 150 2.3E-7 T 14-10-2018 BJD94_01040 a7508bea8127634278d592618d09ebee 328 Pfam PF08448 PAS fold 28 141 2.1E-5 T 14-10-2018 IPR013656 PAS fold-4 BJD94_01040 a7508bea8127634278d592618d09ebee 328 SUPERFAMILY SSF55785 25 103 2.86E-6 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_01040 a7508bea8127634278d592618d09ebee 328 Gene3D G3DSA:3.30.70.270 151 327 2.0E-45 T 14-10-2018 BJD94_20315 b3652d76adf48a136babb18704b65179 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 68.285 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein BJD94_20315 b3652d76adf48a136babb18704b65179 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.3E-71 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BJD94_10605 e55e629f8c871596b34a9dab73ccd830 256 Gene3D G3DSA:3.20.20.140 1 254 9.6E-82 T 14-10-2018 BJD94_10605 e55e629f8c871596b34a9dab73ccd830 256 Pfam PF01026 TatD related DNase 2 252 1.8E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_10605 e55e629f8c871596b34a9dab73ccd830 256 SUPERFAMILY SSF51556 1 253 1.29E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_10605 e55e629f8c871596b34a9dab73ccd830 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 253 1.2E-73 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BJD94_10605 e55e629f8c871596b34a9dab73ccd830 256 PIRSF PIRSF005902 1 256 5.0E-73 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_01160 7b6a346ccea0ff071df3b0ea4637e27b 59 SUPERFAMILY SSF158997 1 53 3.27E-20 T 14-10-2018 BJD94_01160 7b6a346ccea0ff071df3b0ea4637e27b 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.232 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 BJD94_01160 7b6a346ccea0ff071df3b0ea4637e27b 59 Pfam PF03966 Trm112p-like protein 2 41 3.1E-11 T 14-10-2018 IPR005651 Trm112-like BJD94_01160 7b6a346ccea0ff071df3b0ea4637e27b 59 Gene3D G3DSA:2.20.25.10 8 59 3.1E-23 T 14-10-2018 BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Gene3D G3DSA:3.40.50.300 193 336 5.8E-27 T 14-10-2018 BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 498 1.4E-37 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 SUPERFAMILY SSF52540 198 681 1.8E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 6.5E-52 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Gene3D G3DSA:3.40.50.300 507 682 6.7E-27 T 14-10-2018 BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Pfam PF13361 UvrD-like helicase C-terminal domain 595 667 5.0E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD94_20800 4f26255082c659ecaa1bdb1d9df7e9b3 690 Gene3D G3DSA:3.40.50.300 361 506 4.4E-18 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00397 Sirohaem Fe-binding site signature 670 688 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00397 Sirohaem Fe-binding site signature 627 645 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 4.8E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PIRSF PIRSF037149 1 826 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 791 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 SUPERFAMILY SSF56014 624 798 8.9E-51 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Gene3D G3DSA:3.50.50.60 5 280 1.1E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 748 7.8E-19 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 414 462 1.9E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 670 686 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 SUPERFAMILY SSF51905 3 190 1.84E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Gene3D G3DSA:1.10.10.1100 414 468 1.0E-12 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Gene3D G3DSA:3.30.413.10 622 782 2.3E-35 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 SUPERFAMILY SSF55124 493 632 1.1E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 551 612 5.9E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.3E-16 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 8.3E-16 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 8.3E-16 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 8.3E-16 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.3E-16 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 Gene3D G3DSA:3.50.50.60 108 243 1.1E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 SUPERFAMILY SSF51905 147 305 1.99E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.6E-10 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 1.6E-10 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.6E-10 T 14-10-2018 BJD94_14950 1d3c6f604913041fe0bd403057d790e4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 1.6E-10 T 14-10-2018 BJD94_05985 64f487f340d580025ee710a4739128bc 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 4.0E-7 T 14-10-2018 IPR012639 Tryptophan operon leader peptide BJD94_05985 64f487f340d580025ee710a4739128bc 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 1.0E-29 T 14-10-2018 IPR012639 Tryptophan operon leader peptide BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 SMART SM00382 32 223 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 PIRSF PIRSF039085 4 247 7.3E-88 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 Pfam PF00005 ABC transporter 23 175 4.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 Gene3D G3DSA:3.40.50.300 3 247 2.6E-71 T 14-10-2018 BJD94_16545 ff885d7e1cfec56696f3f0d2cb7522e9 247 SUPERFAMILY SSF52540 8 242 2.23E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 Hamap MF_01694 Biotin synthase [bioB]. 1 298 40.97 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 Gene3D G3DSA:3.20.20.70 1 300 2.5E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 TIGRFAM TIGR00433 bioB: biotin synthase 2 295 1.7E-125 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 PIRSF PIRSF001619 1 304 1.6E-135 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 SUPERFAMILY SSF102114 2 295 2.62E-85 T 14-10-2018 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 SMART SM00876 205 297 3.1E-45 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 Pfam PF04055 Radical SAM superfamily 35 184 2.5E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 SMART SM00729 28 240 3.3E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_05490 0cfc5e6fc6540fc300b08fe2cfe5f9c7 335 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 205 295 7.7E-21 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 Pfam PF01479 S4 domain 1 44 2.7E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 SUPERFAMILY SSF55120 60 228 1.33E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 Gene3D G3DSA:3.30.70.1560 127 210 4.2E-57 T 14-10-2018 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 SUPERFAMILY SSF55174 1 55 1.19E-11 T 14-10-2018 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 4.4E-49 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 3.7E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 Gene3D G3DSA:3.10.290.10 1 61 1.8E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 Gene3D G3DSA:3.30.70.580 62 228 4.2E-57 T 14-10-2018 BJD94_05030 7d36175551cff2932c1207b8400e9563 233 SMART SM00363 1 59 6.5E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 Pfam PF00230 Major intrinsic protein 5 251 2.7E-63 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 251 1.1E-68 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 Gene3D G3DSA:1.20.1080.10 2 259 7.6E-98 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 185 207 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 10 29 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 152 170 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_14715 1955e8d086b63ee0d096c3f92892f78c 283 SUPERFAMILY SSF81338 8 253 2.09E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_06785 4fb2f03cef9d246f8682f2030ce4a62d 154 SUPERFAMILY SSF54637 4 143 2.39E-29 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_06785 4fb2f03cef9d246f8682f2030ce4a62d 154 PIRSF PIRSF020565 1 154 1.9E-68 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted BJD94_06785 4fb2f03cef9d246f8682f2030ce4a62d 154 Gene3D G3DSA:3.10.129.10 3 144 5.8E-24 T 14-10-2018 BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 SUPERFAMILY SSF100950 1 262 3.35E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.032 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 Gene3D G3DSA:3.40.50.1360 1 266 9.7E-120 T 14-10-2018 BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 5.4E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BJD94_18080 6024e0d0db686cb0487fc7586314e0ab 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.7E-139 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 Pfam PF13365 Trypsin-like peptidase domain 82 216 1.2E-32 T 14-10-2018 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 8.0E-168 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 SUPERFAMILY SSF50494 43 266 1.8E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 SMART SM00228 257 339 6.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.30.42.10 257 354 2.1E-24 T 14-10-2018 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 SUPERFAMILY SSF50156 240 347 6.97E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.40.10.10 31 142 1.6E-32 T 14-10-2018 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 Pfam PF13180 PDZ domain 258 347 3.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_09015 f11a440bfd8c53dd36299f30471238cd 355 Gene3D G3DSA:2.40.10.10 143 256 1.3E-36 T 14-10-2018 BJD94_12105 076c40d1376e610075f201cd6a135973 567 Gene3D G3DSA:1.20.1730.10 5 328 1.6E-34 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD94_12105 076c40d1376e610075f201cd6a135973 567 Gene3D G3DSA:1.20.1730.10 348 555 8.7E-27 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD94_12105 076c40d1376e610075f201cd6a135973 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 2.6E-262 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily BJD94_12105 076c40d1376e610075f201cd6a135973 567 Pfam PF00474 Sodium:solute symporter family 368 489 3.0E-19 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD94_12105 076c40d1376e610075f201cd6a135973 567 Pfam PF00474 Sodium:solute symporter family 33 302 2.8E-33 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD94_00635 6c0f0483505f07100b7b3883f9e599e2 140 Pfam PF04347 Flagellar biosynthesis protein, FliO 58 136 5.8E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BJD94_00635 6c0f0483505f07100b7b3883f9e599e2 140 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 46 113 1.4E-21 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 SUPERFAMILY SSF46689 6 81 6.98E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 Gene3D G3DSA:1.10.357.10 1 193 2.9E-69 T 14-10-2018 BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_11340 9f9753db9d10d442f56be527e4341c4a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.0E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF53850 91 321 5.07E-41 T 14-10-2018 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 167 267 7.8E-98 T 14-10-2018 BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:1.10.10.10 1 86 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF46785 1 113 7.07E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_05535 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 93 303 7.8E-98 T 14-10-2018 BJD94_00410 56257216d1be5a8253df2b371ad0083d 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 2.8E-112 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 BJD94_00410 56257216d1be5a8253df2b371ad0083d 281 Gene3D G3DSA:3.60.20.10 1 258 4.8E-99 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_00410 56257216d1be5a8253df2b371ad0083d 281 SUPERFAMILY SSF56235 2 253 7.03E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 Pfam PF00072 Response regulator receiver domain 4 113 7.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 3.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 Gene3D G3DSA:1.10.10.10 124 228 1.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 SMART SM00862 147 222 3.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-39 T 14-10-2018 BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 222 2.6E-102 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 SUPERFAMILY SSF52172 1 178 1.46E-39 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17370 f10019bc5ba2244d8c92013062b4f1f4 231 SMART SM00448 1 112 2.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_13020 37202173ead1d58332272a4b85073ac6 373 Gene3D G3DSA:3.90.1150.10 9 369 1.6E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_13020 37202173ead1d58332272a4b85073ac6 373 SUPERFAMILY SSF53383 9 371 1.95E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_13020 37202173ead1d58332272a4b85073ac6 373 Pfam PF00266 Aminotransferase class-V 13 356 1.4E-37 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_13020 37202173ead1d58332272a4b85073ac6 373 Gene3D G3DSA:3.40.640.10 22 270 1.6E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_13020 37202173ead1d58332272a4b85073ac6 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BJD94_13020 37202173ead1d58332272a4b85073ac6 373 PIRSF PIRSF000524 5 373 2.0E-112 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BJD94_05025 815fbd140e1a3cbaa93d80728638ab46 400 SUPERFAMILY SSF103473 13 398 9.55E-65 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_05025 815fbd140e1a3cbaa93d80728638ab46 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 394 2.5E-118 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD94_05025 815fbd140e1a3cbaa93d80728638ab46 400 Gene3D G3DSA:1.20.1720.10 17 395 3.6E-101 T 14-10-2018 BJD94_05025 815fbd140e1a3cbaa93d80728638ab46 400 Pfam PF07690 Major Facilitator Superfamily 24 363 1.0E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_19840 79492cbe6e264e07deed3350223d10f3 304 PIRSF PIRSF016660 1 302 7.1E-122 T 14-10-2018 IPR008526 Inner membrane protein YedI BJD94_19840 79492cbe6e264e07deed3350223d10f3 304 Pfam PF05661 Protein of unknown function (DUF808) 4 290 3.7E-117 T 14-10-2018 IPR008526 Inner membrane protein YedI BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PIRSF PIRSF000166 2 305 6.2E-128 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 SUPERFAMILY SSF102886 5 305 1.7E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 6.1E-132 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 Gene3D G3DSA:3.40.1500.10 1 305 1.2E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.7E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_10905 a8310ab7c81f79c9c2e2893c924cf163 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.208 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD94_18825 5608fd3b33f6282bbb0f27dbbeaeab38 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 375 458 1.4E-32 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_18825 5608fd3b33f6282bbb0f27dbbeaeab38 467 SUPERFAMILY SSF52794 373 466 3.31E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_18825 5608fd3b33f6282bbb0f27dbbeaeab38 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 466 6.4E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_18825 5608fd3b33f6282bbb0f27dbbeaeab38 467 Gene3D G3DSA:3.40.50.2300 368 467 6.2E-35 T 14-10-2018 BJD94_18825 5608fd3b33f6282bbb0f27dbbeaeab38 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 342 6.2E-76 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 Pfam PF02397 Bacterial sugar transferase 281 463 2.6E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 471 1.7E-140 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 Gene3D G3DSA:3.40.50.720 144 266 6.0E-14 T 14-10-2018 BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 SUPERFAMILY SSF51735 145 273 1.1E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 471 6.2E-157 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 BJD94_02190 4d525f339ea8e08f5c11b5f5b8cf2d49 471 Pfam PF13727 CoA-binding domain 62 245 1.4E-29 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 SUPERFAMILY SSF111369 50 291 1.01E-63 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 Gene3D G3DSA:2.40.30.170 52 276 5.0E-75 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 Gene3D G3DSA:2.40.420.20 277 368 7.7E-20 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 Gene3D G3DSA:1.10.287.470 93 166 5.0E-75 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 Gene3D G3DSA:2.40.50.100 58 201 5.0E-75 T 14-10-2018 BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 283 1.6E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_15605 e47e06b5e0a875d1a7fe884f0a9e2eeb 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 368 2.0E-80 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-8 T 14-10-2018 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-8 T 14-10-2018 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 PIRSF PIRSF000171 332 530 4.0E-14 T 14-10-2018 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 PIRSF PIRSF000171 1 273 5.8E-26 T 14-10-2018 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:3.90.700.10 248 358 1.0E-154 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF56425 238 353 5.83E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.9E-212 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF46977 426 525 3.4E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:3.50.50.60 10 404 1.0E-154 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 6.4E-15 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 SUPERFAMILY SSF51905 5 447 2.76E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 Gene3D G3DSA:1.20.58.100 425 535 1.9E-44 T 14-10-2018 BJD94_13655 cd0401abade11ec55bf87ec04594ce1d 535 Pfam PF00890 FAD binding domain 10 392 1.6E-102 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_19510 b6704c91a7799dfc23f028959d92a4cf 166 Gene3D G3DSA:3.40.630.30 1 163 2.9E-42 T 14-10-2018 BJD94_19510 b6704c91a7799dfc23f028959d92a4cf 166 SUPERFAMILY SSF55729 3 161 1.89E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_19510 b6704c91a7799dfc23f028959d92a4cf 166 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 6.9E-16 T 14-10-2018 IPR000182 GNAT domain BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 Pfam PF03466 LysR substrate binding domain 93 291 1.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 Gene3D G3DSA:1.10.10.10 5 91 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 Gene3D G3DSA:3.40.190.10 102 289 2.3E-33 T 14-10-2018 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 Gene3D G3DSA:3.40.190.10 163 262 2.3E-33 T 14-10-2018 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 SUPERFAMILY SSF53850 93 292 9.59E-27 T 14-10-2018 BJD94_19270 4c14be34bf37167d53ac3688590efd76 296 SUPERFAMILY SSF46785 6 113 5.17E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_01490 3c4da2650474ef0e07dbba3b1c46168e 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.8E-105 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD94_01490 3c4da2650474ef0e07dbba3b1c46168e 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.7E-168 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD94_01490 3c4da2650474ef0e07dbba3b1c46168e 378 PIRSF PIRSF000267 2 376 2.6E-121 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD94_20235 2943517569c5f9d862f69ce82a763d55 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 2.5E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BJD94_20235 2943517569c5f9d862f69ce82a763d55 456 Gene3D G3DSA:3.30.1330.90 10 157 1.7E-51 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD94_20235 2943517569c5f9d862f69ce82a763d55 456 SUPERFAMILY SSF143548 16 155 2.62E-45 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD94_20235 2943517569c5f9d862f69ce82a763d55 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 8.9E-201 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD94_20235 2943517569c5f9d862f69ce82a763d55 456 Pfam PF03315 Serine dehydratase beta chain 3 153 7.2E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD94_15410 5d523549196e38fdd0045e9143bfa402 376 SUPERFAMILY SSF52096 16 345 7.85E-56 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_15410 5d523549196e38fdd0045e9143bfa402 376 Gene3D G3DSA:3.90.226.10 4 376 1.1E-115 T 14-10-2018 BJD94_15410 5d523549196e38fdd0045e9143bfa402 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 20 359 2.0E-108 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 BJD94_16865 db847c2b471f8f8f31d2e120a26683aa 546 Pfam PF08019 Domain of unknown function (DUF1705) 58 209 3.3E-51 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BJD94_16865 db847c2b471f8f8f31d2e120a26683aa 546 Pfam PF00884 Sulfatase 240 529 2.1E-47 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_16865 db847c2b471f8f8f31d2e120a26683aa 546 Gene3D G3DSA:3.40.720.10 215 546 3.1E-83 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_16865 db847c2b471f8f8f31d2e120a26683aa 546 SUPERFAMILY SSF53649 240 531 2.62E-17 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_17605 c6efa941cdc8f8c0f7e82123a764eacd 151 SUPERFAMILY SSF51316 22 148 6.28E-52 T 14-10-2018 IPR011057 Mss4-like superfamily BJD94_17605 c6efa941cdc8f8c0f7e82123a764eacd 151 Pfam PF01641 SelR domain 28 144 5.1E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_17605 c6efa941cdc8f8c0f7e82123a764eacd 151 Gene3D G3DSA:2.170.150.20 6 150 1.2E-52 T 14-10-2018 BJD94_17605 c6efa941cdc8f8c0f7e82123a764eacd 151 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 149 9.2E-49 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_11680 2cacd286ccc08752b8d94ed8e9fe10f2 73 Pfam PF10678 Protein of unknown function (DUF2492) 2 72 6.8E-24 T 14-10-2018 IPR019620 Putative metal-binding protein BJD94_11680 2cacd286ccc08752b8d94ed8e9fe10f2 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.0E-24 T 14-10-2018 IPR019620 Putative metal-binding protein BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 1.5E-28 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.30.70.260 296 383 3.8E-25 T 14-10-2018 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:1.20.59.10 3 112 1.9E-31 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 SMART SM00830 12 93 1.4E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF55021 284 381 1.37E-25 T 14-10-2018 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 113 287 4.1E-53 T 14-10-2018 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 193 278 4.1E-53 T 14-10-2018 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 PIRSF PIRSF001500 1 384 5.0E-141 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF00800 Prephenate dehydratase 110 291 8.4E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF53850 109 294 1.52E-54 T 14-10-2018 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF48600 7 95 4.4E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_08455 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF01817 Chorismate mutase type II 12 91 8.5E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_21725 dac280fb57c2b04d8ca998062525b86e 384 SUPERFAMILY SSF103473 11 377 3.01E-38 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_21725 dac280fb57c2b04d8ca998062525b86e 384 Gene3D G3DSA:1.20.1250.20 202 379 1.1E-11 T 14-10-2018 BJD94_21725 dac280fb57c2b04d8ca998062525b86e 384 Pfam PF07690 Major Facilitator Superfamily 16 341 2.6E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_21725 dac280fb57c2b04d8ca998062525b86e 384 Gene3D G3DSA:1.20.1250.20 7 192 8.7E-17 T 14-10-2018 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 Gene3D G3DSA:3.40.50.2300 160 289 3.3E-84 T 14-10-2018 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 Gene3D G3DSA:3.40.50.2300 62 308 3.3E-84 T 14-10-2018 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 SUPERFAMILY SSF53822 61 329 9.24E-87 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 SMART SM00354 1 71 1.1E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 SUPERFAMILY SSF47413 2 59 3.07E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 Gene3D G3DSA:1.10.260.40 1 59 6.1E-21 T 14-10-2018 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 3.9E-37 T 14-10-2018 BJD94_18485 d4b4b28d6539c308c284d2013055d45a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_21600 c2422fbb5814c6f27de7fddfc3301efb 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 6.9E-51 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 BJD94_21600 c2422fbb5814c6f27de7fddfc3301efb 145 SUPERFAMILY SSF158675 1 145 1.01E-53 T 14-10-2018 IPR023132 Sama2622-like superfamily BJD94_21600 c2422fbb5814c6f27de7fddfc3301efb 145 Gene3D G3DSA:1.10.3440.10 14 144 8.4E-6 T 14-10-2018 IPR023132 Sama2622-like superfamily BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Gene3D G3DSA:3.20.20.140 2 247 1.3E-42 T 14-10-2018 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 SMART SM00481 4 73 5.3E-4 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Pfam PF14579 Helix-hairpin-helix motif 768 854 1.9E-11 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1003 1.3E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 2.3E-145 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.474 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 3.5E-156 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05635 9784b2d87e70d240291c8fdaedacb100 1024 Pfam PF02811 PHP domain 8 100 4.9E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 BJD94_10490 654adec41240ab0bc6e479261b5684f0 128 PIRSF PIRSF016821 5 128 1.5E-43 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 BJD94_10490 654adec41240ab0bc6e479261b5684f0 128 Pfam PF01479 S4 domain 8 53 1.7E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_10490 654adec41240ab0bc6e479261b5684f0 128 SUPERFAMILY SSF55174 8 105 2.22E-32 T 14-10-2018 BJD94_10490 654adec41240ab0bc6e479261b5684f0 128 Gene3D G3DSA:3.10.290.10 2 107 1.0E-38 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_10490 654adec41240ab0bc6e479261b5684f0 128 SMART SM00363 8 71 1.4E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 8.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 SMART SM00418 15 93 3.4E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 Gene3D G3DSA:1.10.10.10 1 98 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08570 6d9e403619ad65700271f2e31beabc4a 98 SUPERFAMILY SSF46785 9 96 6.02E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Gene3D G3DSA:3.30.870.10 320 499 4.3E-73 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 SUPERFAMILY SSF56024 500 683 1.6E-67 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.444 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 SUPERFAMILY SSF56024 315 495 3.45E-56 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Gene3D G3DSA:1.20.58.310 9 109 6.3E-36 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.1E-30 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.3E-264 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Gene3D G3DSA:3.30.870.10 500 686 1.5E-72 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.7E-46 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Gene3D G3DSA:3.30.1840.10 110 307 7.3E-75 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 SUPERFAMILY SSF140356 4 105 3.53E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 SUPERFAMILY SSF143724 107 313 2.55E-63 T 14-10-2018 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 PIRSF PIRSF015589 1 695 8.8E-254 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD94_08350 b6061fbe8d8e0e6ba4e9e397e192394b 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.1E-146 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 6.1E-40 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 SMART SM00518 12 288 1.1E-120 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 SUPERFAMILY SSF51658 12 287 4.06E-98 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 1.9E-106 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 Gene3D G3DSA:3.20.20.150 10 292 1.8E-110 T 14-10-2018 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BJD94_08710 1f228bf26c89037d53a230bb65d8f1ed 293 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.108 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BJD94_07775 45f06407685a0efa42951a263d524520 359 Gene3D G3DSA:3.30.70.2810 1 74 6.0E-30 T 14-10-2018 BJD94_07775 45f06407685a0efa42951a263d524520 359 Pfam PF01728 FtsJ-like methyltransferase 184 247 6.6E-6 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BJD94_07775 45f06407685a0efa42951a263d524520 359 SUPERFAMILY SSF53335 182 277 2.13E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_07775 45f06407685a0efa42951a263d524520 359 PIRSF PIRSF028774 1 358 1.7E-191 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BJD94_07775 45f06407685a0efa42951a263d524520 359 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 353 83.396 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BJD94_07775 45f06407685a0efa42951a263d524520 359 Gene3D G3DSA:3.30.2300.20 76 173 7.7E-37 T 14-10-2018 BJD94_07775 45f06407685a0efa42951a263d524520 359 Gene3D G3DSA:3.40.50.150 174 354 1.2E-52 T 14-10-2018 BJD94_21440 8577704e45e194a788694f9700ba9023 204 SMART SM00271 152 204 3.5E-8 T 14-10-2018 IPR001623 DnaJ domain BJD94_21440 8577704e45e194a788694f9700ba9023 204 Pfam PF12339 DNA-J related protein 16 137 9.7E-42 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal BJD94_21440 8577704e45e194a788694f9700ba9023 204 Gene3D G3DSA:1.10.287.110 147 204 2.4E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_21440 8577704e45e194a788694f9700ba9023 204 Pfam PF00226 DnaJ domain 158 203 6.9E-10 T 14-10-2018 IPR001623 DnaJ domain BJD94_21440 8577704e45e194a788694f9700ba9023 204 SUPERFAMILY SSF46565 154 203 7.07E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_20850 2f398ddcc2475550b444c5c882578454 728 Gene3D G3DSA:3.40.970.50 316 362 2.2E-5 T 14-10-2018 BJD94_20850 2f398ddcc2475550b444c5c882578454 728 Pfam PF14522 Cytochrome c7 and related cytochrome c 621 710 8.3E-6 T 14-10-2018 IPR029467 C-type polyheme cytochrome OmcB BJD94_20850 2f398ddcc2475550b444c5c882578454 728 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 47 722 1.8E-162 T 14-10-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC BJD94_20850 2f398ddcc2475550b444c5c882578454 728 SUPERFAMILY SSF48695 278 713 4.02E-24 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_10620 30e02882ec9e48d249dc50ee78053411 78 Pfam PF02416 mttA/Hcf106 family 4 61 1.0E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BJD94_10620 30e02882ec9e48d249dc50ee78053411 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 9.4E-23 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BJD94_10620 30e02882ec9e48d249dc50ee78053411 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 26.069 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BJD94_21550 289a54b059c8e2326b4dbf0e0726736f 293 Pfam PF11060 Protein of unknown function (DUF2861) 23 289 4.8E-91 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 BJD94_16950 3bcf4866874db9a32822547b1f71757d 285 SUPERFAMILY SSF53613 1 274 1.87E-69 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16950 3bcf4866874db9a32822547b1f71757d 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 5.1E-100 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD94_16950 3bcf4866874db9a32822547b1f71757d 285 Gene3D G3DSA:3.40.1190.20 1 285 1.2E-86 T 14-10-2018 IPR029056 Ribokinase-like BJD94_16950 3bcf4866874db9a32822547b1f71757d 285 Pfam PF08543 Phosphomethylpyrimidine kinase 87 254 3.0E-21 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD94_19935 e49111f6273d57fccc00b9690dbc8db2 457 SUPERFAMILY SSF102114 59 439 7.53E-82 T 14-10-2018 BJD94_19935 e49111f6273d57fccc00b9690dbc8db2 457 Pfam PF04055 Radical SAM superfamily 67 233 1.1E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_19935 e49111f6273d57fccc00b9690dbc8db2 457 Gene3D G3DSA:3.80.30.20 28 364 7.4E-73 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_19935 e49111f6273d57fccc00b9690dbc8db2 457 SMART SM00729 62 285 1.4E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_19935 e49111f6273d57fccc00b9690dbc8db2 457 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 3.7E-180 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW BJD94_20250 eebe5954811162b4b31315aa7baab910 172 SUPERFAMILY SSF55811 9 142 2.03E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_20250 eebe5954811162b4b31315aa7baab910 172 Pfam PF00293 NUDIX domain 23 143 5.8E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_20250 eebe5954811162b4b31315aa7baab910 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_20250 eebe5954811162b4b31315aa7baab910 172 Gene3D G3DSA:3.90.79.10 13 150 7.6E-25 T 14-10-2018 BJD94_21480 ae4fc8c72311905e6f2b375b7b740525 481 Pfam PF01266 FAD dependent oxidoreductase 12 340 1.2E-10 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_21480 ae4fc8c72311905e6f2b375b7b740525 481 Gene3D G3DSA:3.50.50.60 8 132 1.9E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_21480 ae4fc8c72311905e6f2b375b7b740525 481 SUPERFAMILY SSF51905 11 308 1.94E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 4.2E-131 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.1E-53 T 14-10-2018 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 SUPERFAMILY SSF118215 9 407 4.97E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_18940 dae3b454dc4b22be741e832d27005a2f 434 Gene3D G3DSA:1.10.3860.10 1 425 9.5E-140 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_14800 3fcf686a70ab4acd41c2147a44fdfa1c 199 SUPERFAMILY SSF52317 3 192 1.02E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_14800 3fcf686a70ab4acd41c2147a44fdfa1c 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 184 2.5E-62 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 BJD94_14800 3fcf686a70ab4acd41c2147a44fdfa1c 199 Gene3D G3DSA:3.40.50.880 1 194 5.9E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_14800 3fcf686a70ab4acd41c2147a44fdfa1c 199 Pfam PF01965 DJ-1/PfpI family 3 169 8.8E-38 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD94_15730 41b58ad692e1bf722d3f61ff4ee55bb8 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 8.5E-98 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BJD94_15730 41b58ad692e1bf722d3f61ff4ee55bb8 299 Pfam PF01040 UbiA prenyltransferase family 32 277 6.7E-63 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD94_15730 41b58ad692e1bf722d3f61ff4ee55bb8 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site BJD94_15730 41b58ad692e1bf722d3f61ff4ee55bb8 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.47 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BJD94_15730 41b58ad692e1bf722d3f61ff4ee55bb8 299 Gene3D G3DSA:1.10.357.140 23 184 3.0E-23 T 14-10-2018 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 SMART SM00530 17 79 1.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 6.3E-103 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 Pfam PF01381 Helix-turn-helix 18 79 2.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 SUPERFAMILY SSF47413 12 84 7.04E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 Gene3D G3DSA:1.10.260.40 11 93 8.2E-14 T 14-10-2018 BJD94_20095 2ddaa8c496bc4d02a8deab2b19c28689 507 Pfam PF06114 IrrE N-terminal-like domain 206 326 2.9E-5 T 14-10-2018 IPR010359 IrrE N-terminal-like domain BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.384 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Gene3D G3DSA:3.10.20.590 796 856 8.8E-24 T 14-10-2018 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.4E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 5.8E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 14-10-2018 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 SUPERFAMILY SSF52374 4 666 1.28E-146 T 14-10-2018 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.8E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 2.0E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.6E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 14-10-2018 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 SUPERFAMILY SSF50677 226 414 6.28E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 SUPERFAMILY SSF47323 660 856 6.54E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD94_07605 80b8856cc8f719e797f9572d633d7dcd 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 Gene3D G3DSA:3.60.21.10 30 365 2.1E-125 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 SUPERFAMILY SSF55816 366 543 2.49E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 487 506 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 36 54 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 211 228 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 242 265 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 287 307 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 PRINTS PR01607 Apyrase family signature 420 443 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.1E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.4E-22 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 SUPERFAMILY SSF56300 31 364 9.79E-97 T 14-10-2018 BJD94_07435 db10effd738e37a2ec9324d4dcd366fa 553 Gene3D G3DSA:3.90.780.10 366 552 2.4E-58 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_20120 5ff22a74366ae19f69a9e0078dc9c2e9 182 Pfam PF12464 Maltose acetyltransferase 6 55 4.3E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD94_20120 5ff22a74366ae19f69a9e0078dc9c2e9 182 SMART SM01266 4 56 6.3E-15 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD94_20120 5ff22a74366ae19f69a9e0078dc9c2e9 182 SUPERFAMILY SSF51161 2 181 7.07E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_20120 5ff22a74366ae19f69a9e0078dc9c2e9 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 3.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_20120 5ff22a74366ae19f69a9e0078dc9c2e9 182 Gene3D G3DSA:2.160.10.10 1 182 1.5E-63 T 14-10-2018 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Pfam PF00005 ABC transporter 330 483 1.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Pfam PF00005 ABC transporter 24 181 9.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 565 0.0013 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.0E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 SMART SM00382 338 534 5.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 SMART SM00382 32 231 8.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Gene3D G3DSA:3.40.50.300 1 287 3.2E-87 T 14-10-2018 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 Gene3D G3DSA:3.40.50.300 301 571 1.8E-86 T 14-10-2018 BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 SUPERFAMILY SSF52540 3 253 3.51E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11380 16d3accbc90d7f3686014cd488e2b680 571 SUPERFAMILY SSF52540 304 553 2.24E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07750 044b76d659aa3e42734decccf8446d98 754 Pfam PF13424 Tetratricopeptide repeat 248 311 2.0E-7 T 14-10-2018 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 Gene3D G3DSA:1.25.40.10 235 487 1.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 Gene3D G3DSA:1.25.40.10 58 232 7.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SMART SM00028 168 201 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SMART SM00028 248 281 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SMART SM00028 328 361 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SMART SM00028 82 115 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SMART SM00028 288 321 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07750 044b76d659aa3e42734decccf8446d98 754 SUPERFAMILY SSF48452 170 354 1.26E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 Gene3D G3DSA:2.60.120.260 48 235 2.0E-45 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 SUPERFAMILY SSF49303 239 330 3.17E-16 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 Pfam PF00703 Glycosyl hydrolases family 2 236 331 2.4E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 Gene3D G3DSA:3.20.20.80 330 674 3.8E-123 T 14-10-2018 BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 SUPERFAMILY SSF49303 789 845 1.73E-7 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 SUPERFAMILY SSF51445 328 676 7.73E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 SUPERFAMILY SSF49785 49 236 1.5E-45 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18850 6e2460a9206b86349c8026f85a74f5a8 859 Gene3D G3DSA:2.60.40.10 236 329 2.7E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.2E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.7E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 SUPERFAMILY SSF55604 9 81 2.22E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 3.7E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 Gene3D G3DSA:3.30.1360.60 3 78 2.2E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BJD94_07705 a97244ea74ee8ac9f23a41d66f119e3f 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 461 2.6E-204 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 4.8E-155 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 SMART SM01003 4 137 7.5E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 Gene3D G3DSA:3.40.50.720 3 353 1.1E-135 T 14-10-2018 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 SUPERFAMILY SSF52283 1 360 9.35E-67 T 14-10-2018 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 Gene3D G3DSA:3.40.50.720 130 305 1.1E-135 T 14-10-2018 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.9E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 SMART SM01002 149 297 9.6E-89 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.7E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 PIRSF PIRSF000183 1 371 9.9E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BJD94_05525 2c091cb6edcb74883a0297b8d8c8e4a2 374 SUPERFAMILY SSF51735 137 303 1.27E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13755 6119f294e6335fc5cade0488614bd118 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.2E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 Hamap MF_00318 Enolase [eno]. 2 417 44.32 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 Gene3D G3DSA:3.20.20.120 128 433 1.1E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD94_13755 6119f294e6335fc5cade0488614bd118 433 SUPERFAMILY SSF51604 143 428 1.84E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD94_13755 6119f294e6335fc5cade0488614bd118 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.4E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 SMART SM01193 4 134 1.7E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 SUPERFAMILY SSF54826 3 138 4.12E-56 T 14-10-2018 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 Gene3D G3DSA:3.30.390.10 1 127 6.7E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal BJD94_13755 6119f294e6335fc5cade0488614bd118 433 SMART SM01192 143 431 1.8E-212 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.6E-206 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_13755 6119f294e6335fc5cade0488614bd118 433 PIRSF PIRSF001400 1 430 2.0E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD94_02905 72642e3b2b20aeb38314c1566f67e976 137 Gene3D G3DSA:3.10.180.10 6 135 1.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02905 72642e3b2b20aeb38314c1566f67e976 137 SUPERFAMILY SSF54593 9 133 1.61E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02905 72642e3b2b20aeb38314c1566f67e976 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 1.4E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_02420 f2166d912e5931ac3127515b02a8e128 314 SUPERFAMILY SSF53474 32 310 4.9E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_02420 f2166d912e5931ac3127515b02a8e128 314 Pfam PF00561 alpha/beta hydrolase fold 37 138 2.8E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_02420 f2166d912e5931ac3127515b02a8e128 314 Gene3D G3DSA:3.40.50.1820 32 313 1.5E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_12570 0ca61d871697f05e1cfca82ff54498fa 260 SUPERFAMILY SSF54534 48 253 1.1E-64 T 14-10-2018 BJD94_12570 0ca61d871697f05e1cfca82ff54498fa 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 4.7E-30 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_12570 0ca61d871697f05e1cfca82ff54498fa 260 Gene3D G3DSA:3.10.50.40 149 260 5.6E-43 T 14-10-2018 BJD94_12570 0ca61d871697f05e1cfca82ff54498fa 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.2E-32 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD94_12570 0ca61d871697f05e1cfca82ff54498fa 260 Gene3D G3DSA:1.10.287.460 31 148 2.1E-32 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 Gene3D G3DSA:3.40.50.720 3 371 6.6E-157 T 14-10-2018 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 2.5E-73 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 1.3E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 SUPERFAMILY SSF52283 1 174 1.02E-52 T 14-10-2018 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 9.2E-272 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 Gene3D G3DSA:3.40.50.720 143 324 6.6E-157 T 14-10-2018 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 SMART SM01003 4 143 6.0E-69 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 PIRSF PIRSF000203 1 516 4.7E-269 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 SMART SM01002 152 317 1.8E-80 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 SUPERFAMILY SSF51735 143 320 3.4E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 BJD94_21570 b43f5c879c8fd3823aa2fac2d3acaa3f 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 1.4E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD94_09200 807f80193ddbd9eb894d8c180229aaf3 62 SUPERFAMILY SSF46955 2 56 5.68E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_09200 807f80193ddbd9eb894d8c180229aaf3 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 1.2E-23 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA BJD94_09200 807f80193ddbd9eb894d8c180229aaf3 62 Gene3D G3DSA:1.10.238.160 2 59 1.4E-9 T 14-10-2018 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 SUPERFAMILY SSF55347 181 489 4.58E-113 T 14-10-2018 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PIRSF PIRSF000110 3 489 6.0E-178 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 84.265 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 Gene3D G3DSA:3.30.360.10 180 488 3.0E-124 T 14-10-2018 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 Gene3D G3DSA:3.40.50.720 4 179 1.3E-58 T 14-10-2018 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 3.5E-202 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 1.4E-114 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 3.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 3.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 3.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 3.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 3.3E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 SUPERFAMILY SSF51735 4 194 3.02E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 4.3E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_04325 784af59e2077412020f5feb471ea4ac7 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Gene3D G3DSA:1.20.272.10 222 326 1.3E-43 T 14-10-2018 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 SUPERFAMILY SSF48019 233 415 1.53E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Gene3D G3DSA:1.10.8.60 146 221 2.1E-23 T 14-10-2018 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 SMART SM00382 30 146 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Gene3D G3DSA:3.40.50.300 1 145 1.4E-46 T 14-10-2018 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Pfam PF16193 AAA C-terminal domain 170 248 1.5E-21 T 14-10-2018 IPR032423 AAA C-terminal domain BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Pfam PF12002 MgsA AAA+ ATPase C terminal 249 415 7.7E-68 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 SUPERFAMILY SSF52540 1 215 4.06E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 139 7.3E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_05505 53bf8bd3894aea3d2dbf27324720df6b 429 Gene3D G3DSA:1.10.3710.10 327 428 2.8E-38 T 14-10-2018 BJD94_07145 a716dc47b8081d6d7a110f11f980134f 135 SUPERFAMILY SSF54631 7 126 2.27E-24 T 14-10-2018 BJD94_07145 a716dc47b8081d6d7a110f11f980134f 135 Pfam PF00571 CBS domain 78 125 3.8E-10 T 14-10-2018 IPR000644 CBS domain BJD94_07145 a716dc47b8081d6d7a110f11f980134f 135 Gene3D G3DSA:3.10.580.10 2 135 1.7E-27 T 14-10-2018 BJD94_07145 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 16 65 6.5 T 14-10-2018 IPR000644 CBS domain BJD94_07145 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 83 130 3.5E-7 T 14-10-2018 IPR000644 CBS domain BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 Gene3D G3DSA:1.10.260.40 1 67 8.6E-18 T 14-10-2018 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 SUPERFAMILY SSF53822 67 322 2.78E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 SMART SM00354 9 79 3.8E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 14-10-2018 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 SUPERFAMILY SSF47413 9 67 8.04E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 Gene3D G3DSA:3.40.50.2300 70 311 1.3E-66 T 14-10-2018 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 4.2E-29 T 14-10-2018 BJD94_11445 882818b84ffd3dfc9ca0d71a59b647c8 335 Gene3D G3DSA:3.40.50.2300 167 295 1.3E-66 T 14-10-2018 BJD94_08380 529b979fee862324a283a3612d926add 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 4.5E-20 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal BJD94_08380 529b979fee862324a283a3612d926add 466 Pfam PF01136 Peptidase family U32 80 355 9.3E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BJD94_08380 529b979fee862324a283a3612d926add 466 Gene3D G3DSA:2.40.30.10 367 453 2.8E-8 T 14-10-2018 BJD94_08380 529b979fee862324a283a3612d926add 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 Pfam PF01476 LysM domain 39 81 9.2E-10 T 14-10-2018 IPR018392 LysM domain BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 SUPERFAMILY SSF51261 38 297 2.82E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 Pfam PF01551 Peptidase family M23 199 293 2.1E-31 T 14-10-2018 IPR016047 Peptidase M23 BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 Gene3D G3DSA:3.10.350.10 36 81 1.3E-11 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 Gene3D G3DSA:2.70.70.10 164 297 5.5E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_13790 4ec25586fe1871f0e84da491de1d957b 298 SMART SM00257 38 82 2.1E-9 T 14-10-2018 IPR018392 LysM domain BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 Gene3D G3DSA:3.10.310.10 117 263 1.1E-106 T 14-10-2018 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.825 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 Gene3D G3DSA:3.10.310.10 5 272 1.1E-106 T 14-10-2018 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.6E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.0E-32 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 9.5E-102 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD94_11580 2ccf62c4f9d995e19a6188a1fe53e968 276 SUPERFAMILY SSF54506 2 274 3.14E-53 T 14-10-2018 BJD94_04555 edc5a3a8ffdebf7c5031d4fc67a7dd8c 323 PIRSF PIRSF017082 2 323 3.8E-84 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BJD94_04555 edc5a3a8ffdebf7c5031d4fc67a7dd8c 323 Gene3D G3DSA:3.40.190.10 123 249 1.5E-59 T 14-10-2018 BJD94_04555 edc5a3a8ffdebf7c5031d4fc67a7dd8c 323 SUPERFAMILY SSF53850 111 289 2.08E-8 T 14-10-2018 BJD94_04555 edc5a3a8ffdebf7c5031d4fc67a7dd8c 323 Gene3D G3DSA:3.40.190.150 29 314 1.5E-59 T 14-10-2018 BJD94_04555 edc5a3a8ffdebf7c5031d4fc67a7dd8c 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 1.4E-25 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 178 241 2.1E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Pfam PF01743 Poly A polymerase head domain 32 151 4.0E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 PIRSF PIRSF000813 30 436 9.1E-199 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Gene3D G3DSA:1.10.3090.10 151 433 1.6E-43 T 14-10-2018 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Gene3D G3DSA:3.30.460.10 17 150 3.1E-30 T 14-10-2018 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Hamap MF_01262 CCA-adding enzyme [cca]. 30 430 42.233 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 SUPERFAMILY SSF81301 23 148 4.25E-33 T 14-10-2018 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Hamap MF_01261 Multifunctional CCA protein [cca]. 30 436 53.597 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 Pfam PF01966 HD domain 258 354 2.6E-6 T 14-10-2018 IPR006674 HD domain BJD94_09100 1c613e7b41150b57511d53222e45f10f 436 SUPERFAMILY SSF81891 149 430 1.14E-52 T 14-10-2018 BJD94_17695 340c3d7c47722e311c2a334c8f8e5ed1 491 Pfam PF03553 Na+/H+ antiporter family 160 464 9.8E-51 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BJD94_17695 340c3d7c47722e311c2a334c8f8e5ed1 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 470 2.1E-161 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 179 4.2E-50 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 Gene3D G3DSA:3.40.50.1240 1 210 8.0E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 PIRSF PIRSF000709 28 167 0.0075 T 14-10-2018 BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 SMART SM00855 2 151 7.3E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 183 2.6E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_04785 9c4639f9e60627fbf480b14d90135bf3 212 SUPERFAMILY SSF53254 1 184 1.35E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_06470 0d69f50a58c012c4bf8b50a434ae64eb 193 Pfam PF13505 Outer membrane protein beta-barrel domain 7 193 5.1E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_06470 0d69f50a58c012c4bf8b50a434ae64eb 193 SUPERFAMILY SSF56925 29 191 2.56E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_06470 0d69f50a58c012c4bf8b50a434ae64eb 193 Gene3D G3DSA:2.40.160.20 26 193 1.0E-6 T 14-10-2018 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 Pfam PF00202 Aminotransferase class-III 57 449 7.5E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 SUPERFAMILY SSF53383 57 449 4.4E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 Gene3D G3DSA:3.40.640.10 89 348 2.0E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 Gene3D G3DSA:3.90.1150.10 61 444 2.0E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 PIRSF PIRSF000521 5 158 8.1E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_20180 a8c07f81c1eae3bbe965055e0de4033a 459 PIRSF PIRSF000521 150 452 1.4E-19 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_15745 7205f226088a50531732012cea2c0801 298 Pfam PF02104 SURF1 family 62 270 5.0E-22 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_10105 fa05f65978e1e1389693990126635b55 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 5.1E-145 T 14-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_10105 fa05f65978e1e1389693990126635b55 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 1.5E-92 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_10105 fa05f65978e1e1389693990126635b55 392 SUPERFAMILY SSF53756 6 376 5.59E-95 T 14-10-2018 BJD94_10105 fa05f65978e1e1389693990126635b55 392 Gene3D G3DSA:3.40.50.2000 193 359 2.4E-89 T 14-10-2018 BJD94_10105 fa05f65978e1e1389693990126635b55 392 Gene3D G3DSA:3.40.50.2000 7 369 2.4E-89 T 14-10-2018 BJD94_01930 713f907c5bc70cdf13d7020c0beee669 238 SMART SM00479 47 228 2.5E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_01930 713f907c5bc70cdf13d7020c0beee669 238 Pfam PF00929 Exonuclease 49 219 1.3E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_01930 713f907c5bc70cdf13d7020c0beee669 238 Gene3D G3DSA:3.30.420.10 44 231 2.2E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_01930 713f907c5bc70cdf13d7020c0beee669 238 SUPERFAMILY SSF53098 47 228 1.69E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 Gene3D G3DSA:3.90.180.10 10 310 2.2E-92 T 14-10-2018 BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 93 1.4E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 SUPERFAMILY SSF51735 122 246 1.88E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 Gene3D G3DSA:3.40.50.720 133 263 2.2E-92 T 14-10-2018 BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 SMART SM00829 12 312 5.4E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 SUPERFAMILY SSF50129 4 154 1.83E-34 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_13890 4ac156b348a053ae75d3ba6930d7e2cf 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 5.3E-20 T 14-10-2018 BJD94_07340 de69bb3e83ffbe228f1e3a3338fd66ad 211 PIRSF PIRSF028688 1 211 2.3E-123 T 14-10-2018 IPR014549 Flagellar protein FlgO BJD94_19945 adc40409fa79d35235eb05ec3feff529 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 3.4E-89 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain BJD94_19945 adc40409fa79d35235eb05ec3feff529 176 SUPERFAMILY SSF50475 12 162 6.55E-34 T 14-10-2018 BJD94_19945 adc40409fa79d35235eb05ec3feff529 176 Gene3D G3DSA:2.30.110.10 11 175 1.8E-55 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_19945 adc40409fa79d35235eb05ec3feff529 176 PIRSF PIRSF004633 1 176 6.6E-80 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain BJD94_19945 adc40409fa79d35235eb05ec3feff529 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 5.5E-19 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:3.10.50.40 171 270 1.5E-69 T 14-10-2018 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:1.10.4030.30 25 272 1.5E-69 T 14-10-2018 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF00639 PPIC-type PPIASE domain 284 375 1.7E-21 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Hamap MF_01183 Chaperone SurA [surA]. 8 423 32.341 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.0E-20 T 14-10-2018 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF54534 172 270 1.05E-24 T 14-10-2018 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF109998 24 197 9.03E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF09312 SurA N-terminal domain 24 141 5.1E-44 T 14-10-2018 IPR015391 SurA N-terminal BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:3.10.50.40 275 415 5.5E-38 T 14-10-2018 BJD94_09395 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF54534 278 380 5.89E-29 T 14-10-2018 BJD94_20670 f3961ae6f39609f1b3adc73786b321b9 376 Pfam PF13432 Tetratricopeptide repeat 90 149 2.1E-5 T 14-10-2018 BJD94_20670 f3961ae6f39609f1b3adc73786b321b9 376 SUPERFAMILY SSF48452 57 212 5.96E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_20670 f3961ae6f39609f1b3adc73786b321b9 376 Gene3D G3DSA:1.25.40.10 23 253 1.3E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 Pfam PF01478 Type IV leader peptidase family 136 244 8.3E-28 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 Gene3D G3DSA:1.20.120.1220 124 284 2.1E-5 T 14-10-2018 BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 6.0E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 6.0E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 6.0E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 6.0E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD94_13970 4492e96c55e7944132a83ee858d6f4e6 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 2.5E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 Gene3D G3DSA:3.40.50.620 194 514 1.4E-110 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 PIRSF PIRSF001589 362 507 3.7E-27 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 PIRSF PIRSF001589 1 376 2.3E-104 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 Gene3D G3DSA:3.60.20.10 2 193 2.5E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 SUPERFAMILY SSF56235 1 196 2.06E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.3E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.4E-115 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 Pfam PF00733 Asparagine synthase 212 511 2.8E-96 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BJD94_07085 72a4887a7a0d194d359bd8d1c94432c0 554 SUPERFAMILY SSF52402 209 479 1.36E-73 T 14-10-2018 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 SMART SM00342 190 272 1.8E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 Gene3D G3DSA:1.10.10.60 233 276 2.3E-16 T 14-10-2018 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 Pfam PF02311 AraC-like ligand binding domain 18 150 6.2E-26 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 SUPERFAMILY SSF46689 174 224 3.23E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 SUPERFAMILY SSF51215 31 156 1.7E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 SUPERFAMILY SSF46689 227 274 3.72E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 Gene3D G3DSA:1.10.10.60 173 232 5.1E-14 T 14-10-2018 BJD94_15785 f3a70f70a03eeb249dc3dc61ba9ef361 276 Pfam PF12833 Helix-turn-helix domain 196 273 2.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_06915 db6a89a3908ce1672889369e4a571516 76 SUPERFAMILY SSF46785 1 55 1.15E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_06915 db6a89a3908ce1672889369e4a571516 76 Gene3D G3DSA:1.10.10.10 1 72 9.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_06915 db6a89a3908ce1672889369e4a571516 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 3.3E-13 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 SMART SM00471 583 892 1.7E-5 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 SUPERFAMILY SSF109604 809 918 4.4E-9 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 SUPERFAMILY SSF109604 578 687 7.22E-7 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Gene3D G3DSA:3.30.450.40 400 559 2.6E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Gene3D G3DSA:1.10.3210.10 562 663 4.2E-19 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Gene3D G3DSA:1.10.3210.10 802 933 3.0E-29 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Pfam PF13487 HD domain 809 874 2.9E-24 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Pfam PF02743 Cache domain 40 278 3.6E-13 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Gene3D G3DSA:3.30.450.20 136 222 1.0E-13 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 Gene3D G3DSA:3.30.450.20 223 303 1.0E-13 T 14-10-2018 BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 SUPERFAMILY SSF103190 157 232 6.83E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_19280 9a76861c78b2386d9efe495c0f2cfc96 959 SUPERFAMILY SSF55781 406 569 1.77E-5 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.2090.10 173 265 4.3E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.2090.10 715 802 4.3E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:1.20.1640.10 8 499 4.3E-251 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82693 136 317 6.02E-8 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82714 725 797 1.15E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:1.20.1640.10 500 1019 4.3E-251 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.70.1440 668 859 4.3E-251 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82866 797 1022 2.49E-47 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82866 286 480 4.71E-34 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.70.1430 557 667 4.3E-251 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 9.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 9.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 9.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82693 38 131 7.32E-18 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 4.6E-157 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.70.1430 38 810 4.3E-251 T 14-10-2018 BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 SUPERFAMILY SSF82714 177 259 3.14E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_18635 cdeaa50570ad7ab54bfe84b4eb1221b5 1033 Gene3D G3DSA:3.30.70.1320 131 318 4.3E-251 T 14-10-2018 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.4E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 SUPERFAMILY SSF50129 1 95 1.17E-31 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 SMART SM00883 2 95 8.8E-51 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.088 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BJD94_12185 f4e65b0978431a86bc740c098f333da6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BJD94_20370 7bf94f312dca38e6f6b39a1b2e9c1b89 200 Pfam PF06961 Protein of unknown function (DUF1294) 103 157 5.0E-14 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 BJD94_20370 7bf94f312dca38e6f6b39a1b2e9c1b89 200 Gene3D G3DSA:2.40.50.140 1 66 1.5E-8 T 14-10-2018 BJD94_20370 7bf94f312dca38e6f6b39a1b2e9c1b89 200 SUPERFAMILY SSF50249 2 64 2.18E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_01725 da46b7726efe3f423b73986901b36826 587 SUPERFAMILY SSF52091 445 536 3.34E-13 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_01725 da46b7726efe3f423b73986901b36826 587 Pfam PF01740 STAS domain 447 539 1.6E-15 T 14-10-2018 IPR002645 STAS domain BJD94_01725 da46b7726efe3f423b73986901b36826 587 Pfam PF00916 Sulfate permease family 24 383 2.4E-81 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD94_01725 da46b7726efe3f423b73986901b36826 587 Gene3D G3DSA:3.30.750.24 435 554 4.4E-20 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_15275 921e60a6149f87ae042eea7c16f1a9e4 216 SUPERFAMILY SSF52317 1 215 6.01E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_15275 921e60a6149f87ae042eea7c16f1a9e4 216 Gene3D G3DSA:3.40.50.880 1 216 1.1E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_15275 921e60a6149f87ae042eea7c16f1a9e4 216 PIRSF PIRSF006320 1 216 4.2E-105 T 14-10-2018 IPR026041 Glyoxalase ElbB BJD94_06835 becabf95160719e8b10b46dcf0bf4837 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.24 T 14-10-2018 IPR027354 YcgL domain BJD94_06835 becabf95160719e8b10b46dcf0bf4837 93 SUPERFAMILY SSF160191 1 91 1.44E-37 T 14-10-2018 IPR038068 YcgL-like superfamily BJD94_06835 becabf95160719e8b10b46dcf0bf4837 93 Gene3D G3DSA:3.10.510.20 1 73 9.7E-30 T 14-10-2018 IPR038068 YcgL-like superfamily BJD94_06835 becabf95160719e8b10b46dcf0bf4837 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 5.0E-35 T 14-10-2018 IPR027354 YcgL domain BJD94_06835 becabf95160719e8b10b46dcf0bf4837 93 Pfam PF05166 YcgL domain 3 74 1.8E-31 T 14-10-2018 IPR027354 YcgL domain BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 2 20 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 102 114 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 120 142 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 Gene3D G3DSA:3.40.50.620 1 142 1.5E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 Pfam PF00582 Universal stress protein family 1 142 1.1E-32 T 14-10-2018 IPR006016 UspA BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 SUPERFAMILY SSF52402 2 144 2.85E-36 T 14-10-2018 BJD94_09475 c458952e90dc4cd0483e38fa427438a0 145 PIRSF PIRSF006276 1 145 6.0E-20 T 14-10-2018 IPR006015 Universal stress protein A BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Gene3D G3DSA:3.30.450.20 197 306 8.3E-9 T 14-10-2018 BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 SUPERFAMILY SSF103190 36 160 1.37E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 SMART SM00387 412 519 3.8E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Pfam PF17203 Single cache domain 3 33 157 3.2E-18 T 14-10-2018 IPR033463 Single cache domain 3 BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 SUPERFAMILY SSF55785 204 295 6.28E-5 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Gene3D G3DSA:3.30.565.10 365 517 5.5E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 SUPERFAMILY SSF55890 317 386 1.57E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 SUPERFAMILY SSF55874 382 518 2.88E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Gene3D G3DSA:3.30.450.20 29 161 3.5E-35 T 14-10-2018 BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Pfam PF14501 GHKL domain 413 516 5.1E-15 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain BJD94_20725 d866e2d62e715023b115b435e9227fc9 519 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 314 357 7.6E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain BJD94_06660 8b8366ce044cadcf9dd7945dda960ca2 285 SUPERFAMILY SSF161098 8 285 3.64E-65 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_06660 8b8366ce044cadcf9dd7945dda960ca2 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 2.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_06660 8b8366ce044cadcf9dd7945dda960ca2 285 Gene3D G3DSA:1.10.3720.10 1 276 9.3E-54 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04450 9572ee9e843b13c47f1d3abbe0fbf6a9 90 SUPERFAMILY SSF54975 5 89 1.13E-26 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD94_04450 9572ee9e843b13c47f1d3abbe0fbf6a9 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD94_04450 9572ee9e843b13c47f1d3abbe0fbf6a9 90 Pfam PF00708 Acylphosphatase 7 89 8.0E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD94_04450 9572ee9e843b13c47f1d3abbe0fbf6a9 90 Gene3D G3DSA:3.30.70.100 1 90 2.4E-29 T 14-10-2018 BJD94_04450 9572ee9e843b13c47f1d3abbe0fbf6a9 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD94_20365 d303b2285a550418a7ffe459f445d532 360 SUPERFAMILY SSF50952 25 354 4.05E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BJD94_20365 d303b2285a550418a7ffe459f445d532 360 Pfam PF07995 Glucose / Sorbosone dehydrogenase 35 355 5.5E-110 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BJD94_20365 d303b2285a550418a7ffe459f445d532 360 Gene3D G3DSA:2.120.10.30 20 360 4.9E-97 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD94_20525 5cd6147707412394e6d6c6f8673e2ee2 481 SMART SM00327 320 479 5.1E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_20525 5cd6147707412394e6d6c6f8673e2ee2 481 Gene3D G3DSA:3.40.50.410 322 465 2.6E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20525 5cd6147707412394e6d6c6f8673e2ee2 481 SUPERFAMILY SSF53300 317 471 1.44E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20525 5cd6147707412394e6d6c6f8673e2ee2 481 Pfam PF05762 VWA domain containing CoxE-like protein 316 448 4.8E-10 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 14-10-2018 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02650 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 14-10-2018 BJD94_13000 370008eca33a13a9afd0e006876fc806 475 Gene3D G3DSA:3.30.450.20 176 301 1.3E-16 T 14-10-2018 BJD94_13000 370008eca33a13a9afd0e006876fc806 475 SMART SM00267 300 474 9.9E-56 T 14-10-2018 IPR000160 GGDEF domain BJD94_13000 370008eca33a13a9afd0e006876fc806 475 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 473 2.6E-50 T 14-10-2018 IPR000160 GGDEF domain BJD94_13000 370008eca33a13a9afd0e006876fc806 475 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 469 3.0E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_13000 370008eca33a13a9afd0e006876fc806 475 SUPERFAMILY SSF55073 316 472 1.8E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_13000 370008eca33a13a9afd0e006876fc806 475 SMART SM00091 185 251 6.1E-9 T 14-10-2018 IPR000014 PAS domain BJD94_13000 370008eca33a13a9afd0e006876fc806 475 SUPERFAMILY SSF55785 177 298 4.01E-16 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_13000 370008eca33a13a9afd0e006876fc806 475 Gene3D G3DSA:3.30.70.270 302 473 2.2E-55 T 14-10-2018 BJD94_13000 370008eca33a13a9afd0e006876fc806 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 307 2.6E-13 T 14-10-2018 IPR000014 PAS domain BJD94_13000 370008eca33a13a9afd0e006876fc806 475 Pfam PF00989 PAS fold 186 297 4.2E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_17735 db3486c540fa0157cc37eab6ec6ff406 235 SUPERFAMILY SSF53720 10 182 2.62E-8 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_17735 db3486c540fa0157cc37eab6ec6ff406 235 Gene3D G3DSA:3.40.605.10 7 233 5.4E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_03135 e161afd13781f0fc661597f6581a6c97 198 Gene3D G3DSA:3.40.50.880 2 195 1.5E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_03135 e161afd13781f0fc661597f6581a6c97 198 Pfam PF01965 DJ-1/PfpI family 3 155 2.8E-8 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD94_03135 e161afd13781f0fc661597f6581a6c97 198 SUPERFAMILY SSF52317 1 173 5.73E-20 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_21430 6bb427d0ad9cfc3bd01ca6eb680babca 204 PIRSF PIRSF020606 4 204 5.3E-84 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 BJD94_21430 6bb427d0ad9cfc3bd01ca6eb680babca 204 Pfam PF09997 Predicted membrane protein (DUF2238) 45 182 5.9E-53 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 SUPERFAMILY SSF49384 26 198 1.38E-63 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Gene3D G3DSA:3.30.379.10 204 329 1.1E-21 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 1.1E-60 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 SUPERFAMILY SSF55545 208 331 3.89E-21 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Gene3D G3DSA:2.60.40.290 25 167 3.3E-54 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 SUPERFAMILY SSF81296 781 882 4.62E-37 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 SUPERFAMILY SSF51445 332 772 9.27E-144 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 1.1E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 SMART SM01081 34 195 2.0E-90 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 4.3E-27 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 3.4E-11 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Gene3D G3DSA:3.20.20.80 330 817 2.7E-165 T 14-10-2018 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.0E-108 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_07385 dbdf592c40e5c09ee68c6953b75a6666 883 Gene3D G3DSA:2.60.40.10 818 882 1.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 536 9.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SUPERFAMILY SSF55874 412 534 2.36E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SUPERFAMILY SSF55890 322 405 6.15E-10 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 369 7.2E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Pfam PF17203 Single cache domain 3 37 167 1.5E-19 T 14-10-2018 IPR033463 Single cache domain 3 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Gene3D G3DSA:3.30.565.10 382 539 8.5E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Gene3D G3DSA:3.30.450.20 34 164 1.6E-39 T 14-10-2018 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Pfam PF00989 PAS fold 215 276 2.5E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SMART SM00091 213 279 1.6E-4 T 14-10-2018 IPR000014 PAS domain BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SUPERFAMILY SSF103190 40 168 4.71E-34 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 Gene3D G3DSA:3.30.450.20 199 310 2.2E-22 T 14-10-2018 BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SMART SM00387 418 537 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04335 a3631097fcb83ed82d0057d6cc7c96c4 539 SUPERFAMILY SSF55785 215 306 1.3E-12 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 SUPERFAMILY SSF55174 297 393 1.06E-14 T 14-10-2018 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.6E-78 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 Gene3D G3DSA:3.10.290.10 327 394 2.2E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 Gene3D G3DSA:1.10.240.10 218 326 2.2E-33 T 14-10-2018 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 8.6E-127 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 Gene3D G3DSA:3.40.50.620 5 217 5.5E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.305 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 BJD94_14240 b9a67bdd19bb9786fe1e61410ff09640 395 SUPERFAMILY SSF52374 6 316 6.76E-98 T 14-10-2018 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 4.5E-132 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 Gene3D G3DSA:1.20.1740.10 1 403 9.1E-6 T 14-10-2018 BJD94_16725 afc3f514ac3631c40a8eb2a016b9cd2f 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 2.9E-129 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Gene3D G3DSA:3.50.30.10 364 482 4.3E-41 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 PIRSF PIRSF000854 5 796 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Gene3D G3DSA:3.20.20.60 483 793 1.9E-106 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 SUPERFAMILY SSF52009 354 472 1.83E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 790 3.4E-64 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Gene3D G3DSA:3.30.1490.20 7 198 8.0E-73 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 793 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 6.4E-118 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 SUPERFAMILY SSF51621 466 795 2.88E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Gene3D G3DSA:3.30.470.20 199 362 1.8E-57 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 SUPERFAMILY SSF56059 6 389 1.53E-109 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 1.3E-5 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 1.3E-5 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 1.3E-5 T 14-10-2018 BJD94_20310 212eb4884eddf7965f99ce3fbeb47dfb 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 390 460 1.8E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.8E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 6.8E-194 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 6.2E-174 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 SMART SM00382 158 342 5.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 Gene3D G3DSA:3.40.50.12240 19 439 1.8E-156 T 14-10-2018 BJD94_00605 bb09505b8b0df50fbb584c5c5edbe5fb 440 SUPERFAMILY SSF52540 94 362 1.97E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 Gene3D G3DSA:3.40.640.10 58 327 2.6E-170 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 Gene3D G3DSA:3.90.1150.10 7 412 2.6E-170 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 PIRSF PIRSF000521 22 421 1.6E-38 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 Pfam PF00202 Aminotransferase class-III 24 418 6.3E-131 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 4.8E-179 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 SUPERFAMILY SSF53383 4 420 1.97E-136 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.992 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BJD94_05495 c322a1c5c08c1202cd3c04e48c831d6b 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 SUPERFAMILY SSF51055 383 426 2.94E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 SUPERFAMILY SSF88713 24 338 1.13E-26 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 Pfam PF01522 Polysaccharide deacetylase 23 129 1.3E-13 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 Gene3D G3DSA:3.20.20.370 27 332 2.9E-103 T 14-10-2018 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 Gene3D G3DSA:2.10.10.90 333 427 4.9E-34 T 14-10-2018 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 SMART SM00495 381 427 5.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_13285 a3e07caccd7137d942ff0168d9f068fd 427 SMART SM00495 332 378 7.7E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Gene3D G3DSA:1.10.8.500 370 422 9.8E-7 T 14-10-2018 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SUPERFAMILY SSF55073 434 575 2.59E-29 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SMART SM00267 418 582 1.6E-26 T 14-10-2018 IPR000160 GGDEF domain BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 575 9.3E-22 T 14-10-2018 IPR000160 GGDEF domain BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SUPERFAMILY SSF141868 600 841 1.57E-81 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Gene3D G3DSA:3.30.450.20 222 338 1.2E-18 T 14-10-2018 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Gene3D G3DSA:3.30.450.20 162 221 1.2E-18 T 14-10-2018 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Gene3D G3DSA:3.20.20.450 595 843 5.6E-90 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Pfam PF00563 EAL domain 599 834 2.7E-72 T 14-10-2018 IPR001633 EAL domain BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Gene3D G3DSA:3.30.70.270 424 594 3.3E-33 T 14-10-2018 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 575 2.2E-27 T 14-10-2018 IPR000160 GGDEF domain BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SUPERFAMILY SSF158472 371 420 4.32E-8 T 14-10-2018 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SMART SM00052 592 839 1.4E-99 T 14-10-2018 IPR001633 EAL domain BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 SMART SM00304 370 423 4.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_10560 7040cad56f75a7f6dc78407cf553e3a3 843 Pfam PF02743 Cache domain 43 313 7.7E-19 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_18520 32e36b31c25c0d412b8a14274782768b 257 SUPERFAMILY SSF53850 104 225 2.39E-11 T 14-10-2018 BJD94_18520 32e36b31c25c0d412b8a14274782768b 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 89 223 2.0E-6 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_18520 32e36b31c25c0d412b8a14274782768b 257 Gene3D G3DSA:3.40.190.10 123 182 4.1E-5 T 14-10-2018 BJD94_18520 32e36b31c25c0d412b8a14274782768b 257 Gene3D G3DSA:3.40.190.10 183 222 4.1E-5 T 14-10-2018 BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 30 133 6.5E-20 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 Pfam PF00437 Type II/IV secretion system protein 181 448 4.6E-88 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 Gene3D G3DSA:3.30.450.90 144 281 1.2E-47 T 14-10-2018 BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 1 552 5.8E-254 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 SUPERFAMILY SSF160246 1 132 1.7E-30 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 SUPERFAMILY SSF52540 161 551 4.66E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 Gene3D G3DSA:3.30.300.160 54 132 3.6E-10 T 14-10-2018 BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 Gene3D G3DSA:3.40.50.300 283 553 6.5E-106 T 14-10-2018 BJD94_13980 e46ba9c0750e2a8915deea55e6b53e3b 554 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 376 390 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_15570 d9d1e995288f6a24115aca4915ca283a 119 Gene3D G3DSA:3.40.30.10 21 118 3.7E-13 T 14-10-2018 BJD94_15570 d9d1e995288f6a24115aca4915ca283a 119 SUPERFAMILY SSF52833 42 119 3.03E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15570 d9d1e995288f6a24115aca4915ca283a 119 Pfam PF00462 Glutaredoxin 43 96 3.3E-10 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_04205 a0f91a667006912282ff5abf937ab073 280 PRINTS PR01021 OMPA domain signature 209 225 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04205 a0f91a667006912282ff5abf937ab073 280 PRINTS PR01021 OMPA domain signature 194 209 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04205 a0f91a667006912282ff5abf937ab073 280 PRINTS PR01021 OMPA domain signature 164 186 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04205 a0f91a667006912282ff5abf937ab073 280 Pfam PF00691 OmpA family 164 258 8.0E-22 T 14-10-2018 IPR006665 OmpA-like domain BJD94_04205 a0f91a667006912282ff5abf937ab073 280 Gene3D G3DSA:3.30.1330.60 143 271 4.9E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_04205 a0f91a667006912282ff5abf937ab073 280 SUPERFAMILY SSF103088 153 264 6.93E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_16680 fda1c08da2b8803f9d5f77f6b63e2f53 423 Gene3D G3DSA:3.30.559.30 211 420 2.2E-19 T 14-10-2018 BJD94_16680 fda1c08da2b8803f9d5f77f6b63e2f53 423 Pfam PF00668 Condensation domain 3 417 4.7E-43 T 14-10-2018 IPR001242 Condensation domain BJD94_16680 fda1c08da2b8803f9d5f77f6b63e2f53 423 Gene3D G3DSA:3.30.559.10 5 195 1.3E-40 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD94_16680 fda1c08da2b8803f9d5f77f6b63e2f53 423 SUPERFAMILY SSF52777 185 414 2.17E-15 T 14-10-2018 BJD94_16680 fda1c08da2b8803f9d5f77f6b63e2f53 423 SUPERFAMILY SSF52777 5 179 3.71E-31 T 14-10-2018 BJD94_07130 38165279f6f5a5d3e70f141b3318ddd0 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 7.3E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_20425 622a343b14083d6faeef19232806be21 586 SUPERFAMILY SSF55486 172 481 4.21E-75 T 14-10-2018 BJD94_20425 622a343b14083d6faeef19232806be21 586 Gene3D G3DSA:3.10.170.10 172 325 3.3E-36 T 14-10-2018 BJD94_20425 622a343b14083d6faeef19232806be21 586 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 325 481 3.2E-40 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 BJD94_20425 622a343b14083d6faeef19232806be21 586 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 173 322 1.0E-35 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 BJD94_20425 622a343b14083d6faeef19232806be21 586 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 277 297 5.6E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_20425 622a343b14083d6faeef19232806be21 586 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 313 329 5.6E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_20425 622a343b14083d6faeef19232806be21 586 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 398 414 5.6E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_20425 622a343b14083d6faeef19232806be21 586 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 334 345 5.6E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD94_20425 622a343b14083d6faeef19232806be21 586 Gene3D G3DSA:1.10.390.10 327 481 4.1E-48 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD94_12700 5ad0549498c33c85f1556063589da452 73 Pfam PF01197 Ribosomal protein L31 1 66 4.3E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 Gene3D G3DSA:2.30.170.50 1 71 6.8E-33 T 14-10-2018 BJD94_12700 5ad0549498c33c85f1556063589da452 73 SUPERFAMILY SSF143800 1 68 2.24E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12700 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.955 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_12700 5ad0549498c33c85f1556063589da452 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 6.9E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_11130 1157a06d1a716e859cb39c4e2dda464e 144 Gene3D G3DSA:3.40.50.360 1 144 6.8E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_11130 1157a06d1a716e859cb39c4e2dda464e 144 Pfam PF00258 Flavodoxin 4 136 4.4E-21 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD94_11130 1157a06d1a716e859cb39c4e2dda464e 144 SUPERFAMILY SSF52218 2 143 8.78E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_16415 c731bd9d9d3a7076467fd4d180a8c9a1 425 Pfam PF07969 Amidohydrolase family 42 403 1.7E-53 T 14-10-2018 IPR013108 Amidohydrolase 3 BJD94_16415 c731bd9d9d3a7076467fd4d180a8c9a1 425 Gene3D G3DSA:3.20.20.140 55 362 1.4E-177 T 14-10-2018 BJD94_16415 c731bd9d9d3a7076467fd4d180a8c9a1 425 SUPERFAMILY SSF51556 54 372 1.93E-105 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_16415 c731bd9d9d3a7076467fd4d180a8c9a1 425 Gene3D G3DSA:2.30.40.10 8 409 1.4E-177 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_16415 c731bd9d9d3a7076467fd4d180a8c9a1 425 SUPERFAMILY SSF51338 1 76 3.02E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_17030 555fcd37c63f272c45694d0320928a9d 238 SMART SM00479 51 225 1.4E-18 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_17030 555fcd37c63f272c45694d0320928a9d 238 Pfam PF00929 Exonuclease 54 216 3.5E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_17030 555fcd37c63f272c45694d0320928a9d 238 Gene3D G3DSA:3.30.420.10 47 227 4.0E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_17030 555fcd37c63f272c45694d0320928a9d 238 SUPERFAMILY SSF53098 46 222 8.02E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_06725 39a5cdcc5eedbde6a4286f32448cbfc3 76 SUPERFAMILY SSF47336 9 75 1.96E-12 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_06725 39a5cdcc5eedbde6a4286f32448cbfc3 76 Pfam PF00550 Phosphopantetheine attachment site 10 70 7.7E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_06725 39a5cdcc5eedbde6a4286f32448cbfc3 76 Gene3D G3DSA:1.10.1200.10 1 75 4.1E-19 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_02830 7f77729b5c75ba52254d700013c39325 122 Gene3D G3DSA:3.10.180.10 1 122 6.4E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02830 7f77729b5c75ba52254d700013c39325 122 SUPERFAMILY SSF54593 3 121 4.26E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02830 7f77729b5c75ba52254d700013c39325 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 6.9E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_06845 6f941cf8ecd23e71c31a095abc75e1bf 270 PIRSF PIRSF003092 1 270 4.2E-94 T 14-10-2018 IPR025501 ATP binding protein MinD BJD94_06845 6f941cf8ecd23e71c31a095abc75e1bf 270 SUPERFAMILY SSF52540 1 268 1.01E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06845 6f941cf8ecd23e71c31a095abc75e1bf 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-109 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BJD94_06845 6f941cf8ecd23e71c31a095abc75e1bf 270 Pfam PF13614 AAA domain 3 159 8.4E-20 T 14-10-2018 IPR025669 AAA domain BJD94_06845 6f941cf8ecd23e71c31a095abc75e1bf 270 Gene3D G3DSA:3.40.50.300 1 260 2.1E-72 T 14-10-2018 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 665 1.4E-234 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 SMART SM00487 265 459 2.5E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 SUPERFAMILY SSF52540 292 653 9.89E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 SMART SM00490 505 589 4.5E-22 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Pfam PF17191 RecG wedge domain 14 171 6.6E-21 T 14-10-2018 IPR033454 RecG, wedge domain BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Gene3D G3DSA:2.40.50.140 47 139 9.8E-13 T 14-10-2018 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 SUPERFAMILY SSF50249 9 174 8.39E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Gene3D G3DSA:3.40.50.300 209 450 9.2E-82 T 14-10-2018 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Gene3D G3DSA:3.40.50.300 457 630 5.5E-54 T 14-10-2018 BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 SUPERFAMILY SSF52540 214 453 1.38E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10370 a26292bdbe2a6a222a9454504c015aa5 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.1E-17 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Gene3D G3DSA:3.10.580.10 694 819 5.8E-11 T 14-10-2018 BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Pfam PF00563 EAL domain 424 657 3.4E-55 T 14-10-2018 IPR001633 EAL domain BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SUPERFAMILY SSF54631 698 817 7.07E-11 T 14-10-2018 BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SMART SM00091 127 193 7.1E-6 T 14-10-2018 IPR000014 PAS domain BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SUPERFAMILY SSF141868 422 665 2.35E-63 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SMART SM00052 415 662 4.9E-51 T 14-10-2018 IPR001633 EAL domain BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Gene3D G3DSA:3.20.20.450 414 671 4.7E-66 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 239 2.3E-7 T 14-10-2018 IPR000014 PAS domain BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SUPERFAMILY SSF55073 254 406 3.37E-5 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Pfam PF13188 PAS domain 128 176 4.6E-5 T 14-10-2018 IPR000014 PAS domain BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 SUPERFAMILY SSF55785 126 235 1.37E-14 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Gene3D G3DSA:3.30.70.270 251 410 3.3E-6 T 14-10-2018 BJD94_01750 fb9462d9ca0ccfad605d73a6ef457fd2 820 Gene3D G3DSA:3.30.450.20 118 237 9.1E-17 T 14-10-2018 BJD94_19165 5ea4c72455c609c12d5e9034a6418b97 172 Pfam PF11286 Protein of unknown function (DUF3087) 2 169 6.6E-57 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 BJD94_07725 972c997f0e1776995f082c1576a53746 225 SUPERFAMILY SSF161098 15 210 1.03E-47 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_07725 972c997f0e1776995f082c1576a53746 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_07725 972c997f0e1776995f082c1576a53746 225 Gene3D G3DSA:1.10.3720.10 12 225 4.7E-52 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_13600 49e0c3a75bb008f1d73abcc1fbdda905 199 Gene3D G3DSA:3.40.50.10420 2 197 1.8E-56 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BJD94_13600 49e0c3a75bb008f1d73abcc1fbdda905 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 7.5E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD94_13600 49e0c3a75bb008f1d73abcc1fbdda905 199 PIRSF PIRSF006806 3 192 1.4E-34 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD94_13600 49e0c3a75bb008f1d73abcc1fbdda905 199 SUPERFAMILY SSF100950 5 197 7.53E-59 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_13600 49e0c3a75bb008f1d73abcc1fbdda905 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 8.0E-53 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD94_07675 283d242dc7a7c81ab639e3b0d1d272b6 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 3.4E-35 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 SMART SM00354 1 72 4.3E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 Gene3D G3DSA:3.40.50.2300 162 291 8.2E-89 T 14-10-2018 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 Gene3D G3DSA:1.10.260.40 3 60 5.8E-21 T 14-10-2018 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 SUPERFAMILY SSF47413 1 61 5.35E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 Gene3D G3DSA:3.40.50.2300 70 323 8.2E-89 T 14-10-2018 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.4E-43 T 14-10-2018 BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 SUPERFAMILY SSF53822 62 332 6.67E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_20570 ee9f079142c073a3041915a8bb0b65ad 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 45 2.9E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_15255 25479f2266b314eca61abc1e4c36f585 197 Gene3D G3DSA:3.40.50.150 17 194 1.8E-27 T 14-10-2018 BJD94_15255 25479f2266b314eca61abc1e4c36f585 197 SUPERFAMILY SSF53335 9 184 1.03E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_15255 25479f2266b314eca61abc1e4c36f585 197 Pfam PF08242 Methyltransferase domain 45 139 6.7E-13 T 14-10-2018 IPR013217 Methyltransferase type 12 BJD94_05210 9d0d3f183fc86e60882623918b0b950a 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.8E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BJD94_05210 9d0d3f183fc86e60882623918b0b950a 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 2.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_05210 9d0d3f183fc86e60882623918b0b950a 295 SUPERFAMILY SSF161098 92 276 2.49E-22 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05210 9d0d3f183fc86e60882623918b0b950a 295 Gene3D G3DSA:1.10.3720.10 84 292 5.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 Gene3D G3DSA:3.60.21.10 37 403 6.8E-88 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 SUPERFAMILY SSF56300 42 354 5.2E-74 T 14-10-2018 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 SUPERFAMILY SSF55816 404 601 6.02E-40 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 Gene3D G3DSA:3.90.780.10 404 610 1.6E-33 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 Pfam PF00149 Calcineurin-like phosphoesterase 47 286 1.5E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 Pfam PF02872 5'-nucleotidase, C-terminal domain 406 573 5.8E-23 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 PRINTS PR01607 Apyrase family signature 548 567 5.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 PRINTS PR01607 Apyrase family signature 45 63 5.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 PRINTS PR01607 Apyrase family signature 269 292 5.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 PRINTS PR01607 Apyrase family signature 309 329 5.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_21345 19e13c18dc3c21d4bde74786fda43932 611 PRINTS PR01607 Apyrase family signature 250 267 5.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_13785 956fef84664b266598b91c97aa805088 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 206 2.3E-76 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD94_13785 956fef84664b266598b91c97aa805088 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.7 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD94_13785 956fef84664b266598b91c97aa805088 208 Gene3D G3DSA:3.40.50.150 1 206 1.3E-74 T 14-10-2018 BJD94_13785 956fef84664b266598b91c97aa805088 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 203 2.8E-67 T 14-10-2018 BJD94_13785 956fef84664b266598b91c97aa805088 208 SUPERFAMILY SSF53335 13 204 6.69E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_13785 956fef84664b266598b91c97aa805088 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.40.50.300 289 565 3.7E-99 T 14-10-2018 BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF52540 170 559 4.14E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.450.90 147 286 4.1E-43 T 14-10-2018 BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF160246 3 145 3.92E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 3.0E-23 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.300.160 63 145 5.5E-6 T 14-10-2018 BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 SMART SM00382 314 435 2.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_13085 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF00437 Type II/IV secretion system protein 189 453 8.8E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SMART SM00271 220 285 5.1E-20 T 14-10-2018 IPR001623 DnaJ domain BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF00226 DnaJ domain 221 283 5.1E-13 T 14-10-2018 IPR001623 DnaJ domain BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 265 285 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 223 241 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 241 256 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF46565 138 283 4.81E-32 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.3680.10 40 192 1.5E-26 T 14-10-2018 IPR029024 TerB-like BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.287.110 195 285 8.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF158682 48 181 1.75E-23 T 14-10-2018 IPR029024 TerB-like BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF05099 Tellurite resistance protein TerB 46 177 3.5E-18 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal BJD94_09385 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 286 40.25 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 BJD94_15030 ea94d027d4bfa65ae45e3a7dbf0db1cd 352 Gene3D G3DSA:3.20.20.190 20 349 3.8E-123 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD94_15030 ea94d027d4bfa65ae45e3a7dbf0db1cd 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 27 343 3.1E-64 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BJD94_15030 ea94d027d4bfa65ae45e3a7dbf0db1cd 352 SUPERFAMILY SSF51695 22 348 1.6E-90 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD94_11395 7eb78196fb94005ecfe76523aa695a07 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 4.0E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_11395 7eb78196fb94005ecfe76523aa695a07 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 1.9E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BJD94_11395 7eb78196fb94005ecfe76523aa695a07 312 Gene3D G3DSA:1.10.3720.10 86 306 7.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11395 7eb78196fb94005ecfe76523aa695a07 312 SUPERFAMILY SSF161098 93 294 4.19E-25 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 SUPERFAMILY SSF64397 4 231 3.79E-74 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 Gene3D G3DSA:3.90.1280.10 225 284 4.2E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 Pfam PF01430 Hsp33 protein 6 272 2.9E-78 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 Gene3D G3DSA:3.55.30.10 1 175 8.2E-61 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 Gene3D G3DSA:1.10.287.480 178 224 1.7E-23 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.93 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 SUPERFAMILY SSF118352 224 282 9.29E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BJD94_10495 9510b37c0d946b5ae78b2e8518f105e8 291 PIRSF PIRSF005261 1 284 5.0E-70 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BJD94_07255 195b1f2b1aba9c39fd7c76d41bd84627 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.3E-92 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BJD94_07255 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 42 241 5.5E-31 T 14-10-2018 BJD94_07255 195b1f2b1aba9c39fd7c76d41bd84627 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 1.9E-11 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD94_07255 195b1f2b1aba9c39fd7c76d41bd84627 397 SUPERFAMILY SSF64518 1 397 2.62E-63 T 14-10-2018 BJD94_07255 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 270 372 2.9E-9 T 14-10-2018 BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 243 7.5E-98 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 Pfam PF00929 Exonuclease 13 180 5.3E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 226 3.3E-80 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 SUPERFAMILY SSF53098 10 190 2.05E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 Gene3D G3DSA:3.30.420.10 4 195 1.8E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_00365 ec33fa06fcce6ce819614adb15833519 243 SMART SM00479 11 189 6.1E-52 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_10760 cc1e475b5320673958dd10f657fa59aa 304 Pfam PF00892 EamA-like transporter family 155 287 5.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_10760 cc1e475b5320673958dd10f657fa59aa 304 Pfam PF00892 EamA-like transporter family 12 145 5.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_10760 cc1e475b5320673958dd10f657fa59aa 304 SUPERFAMILY SSF103481 190 290 1.03E-8 T 14-10-2018 BJD94_10760 cc1e475b5320673958dd10f657fa59aa 304 SUPERFAMILY SSF103481 50 145 2.75E-13 T 14-10-2018 BJD94_10760 cc1e475b5320673958dd10f657fa59aa 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.4E-88 T 14-10-2018 IPR004626 RarD protein GO:0005887 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 Gene3D G3DSA:3.40.50.620 3 202 2.8E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 341 360 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 SUPERFAMILY SSF48173 191 467 4.32E-107 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 PRINTS PR00147 DNA photolyase signature 321 337 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 PRINTS PR00147 DNA photolyase signature 341 359 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 PRINTS PR00147 DNA photolyase signature 142 158 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 PRINTS PR00147 DNA photolyase signature 380 394 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 Gene3D G3DSA:1.10.579.10 289 468 1.2E-80 T 14-10-2018 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 SUPERFAMILY SSF52425 2 187 2.09E-46 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 Pfam PF03441 FAD binding domain of DNA photolyase 271 463 1.1E-81 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 Gene3D G3DSA:1.25.40.80 133 282 2.8E-71 T 14-10-2018 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 Pfam PF00875 DNA photolyase 3 162 7.6E-44 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 BJD94_19580 686d4f9b400c44bd86f81a8bb11b960a 469 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 321 333 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 3.4E-25 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 Gene3D G3DSA:1.10.4030.30 42 176 1.1E-13 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 SUPERFAMILY SSF54534 224 361 1.9E-30 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 Gene3D G3DSA:1.10.4030.30 242 370 6.2E-34 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 SUPERFAMILY SSF109998 39 242 1.55E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 Gene3D G3DSA:3.10.50.40 269 363 6.2E-34 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 Pfam PF13624 SurA N-terminal domain 1 166 1.4E-49 T 14-10-2018 BJD94_06595 79561255622cd0954ed7cc361d41dabf 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 SUPERFAMILY SSF54995 1 103 1.09E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.8E-39 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 Gene3D G3DSA:3.30.70.60 1 92 4.5E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 Pfam PF01250 Ribosomal protein S6 3 91 1.1E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_12830 0b1b4134655f24e543ef93502f8e2470 123 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.04 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 Gene3D G3DSA:3.30.590.10 105 457 2.6E-150 T 14-10-2018 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 Gene3D G3DSA:3.10.20.70 2 104 3.4E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.7E-213 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 SUPERFAMILY SSF55931 102 468 5.79E-140 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 SMART SM01230 102 379 8.2E-154 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 8.8E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_10540 c5443104d22c4835f064a26b4fa415ba 469 SUPERFAMILY SSF54368 3 100 1.26E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 28 102 1.6E-28 T 14-10-2018 BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 SUPERFAMILY SSF158710 28 170 1.57E-53 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 104 175 8.0E-25 T 14-10-2018 BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 PIRSF PIRSF016183 1 175 4.5E-74 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 24.003 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BJD94_09585 62b4bcc7f103e957c5cedf321374a801 185 Pfam PF04751 Protein of unknown function (DUF615) 19 168 5.0E-58 T 14-10-2018 IPR006839 Ribosome-associated, YjgA BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 Gene3D G3DSA:3.40.190.90 109 276 4.3E-126 T 14-10-2018 BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 PIRSF PIRSF004532 1 332 7.5E-136 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 2.4E-168 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.8E-129 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 Gene3D G3DSA:3.30.540.10 7 319 4.3E-126 T 14-10-2018 BJD94_12655 7bba9409ea8f1af1a61c608fd7fd4abe 335 SUPERFAMILY SSF56655 1 324 6.04E-108 T 14-10-2018 BJD94_15310 09240b21dae88d52c9e7ec6f2807f065 364 Gene3D G3DSA:3.40.50.970 1 351 4.0E-105 T 14-10-2018 BJD94_15310 09240b21dae88d52c9e7ec6f2807f065 364 SUPERFAMILY SSF52518 12 352 6.45E-95 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_15310 09240b21dae88d52c9e7ec6f2807f065 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 1.5E-137 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD94_15310 09240b21dae88d52c9e7ec6f2807f065 364 Pfam PF00676 Dehydrogenase E1 component 36 320 2.0E-78 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 SUPERFAMILY SSF141571 2 51 2.16E-9 T 14-10-2018 BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 Pfam PF13599 Pentapeptide repeats (9 copies) 97 166 1.3E-11 T 14-10-2018 IPR001646 Pentapeptide repeat BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 Pfam PF00805 Pentapeptide repeats (8 copies) 13 48 6.7E-6 T 14-10-2018 IPR001646 Pentapeptide repeat BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 Pfam PF00805 Pentapeptide repeats (8 copies) 55 83 0.0089 T 14-10-2018 IPR001646 Pentapeptide repeat BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 Gene3D G3DSA:2.160.20.80 3 217 6.5E-63 T 14-10-2018 BJD94_17295 79b8a07344989c147e9abf4f71b60937 218 SUPERFAMILY SSF141571 53 216 1.77E-38 T 14-10-2018 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Gene3D G3DSA:1.20.1090.10 643 864 9.8E-60 T 14-10-2018 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Gene3D G3DSA:3.40.309.10 218 405 6.2E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 1.7E-112 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Gene3D G3DSA:3.40.50.1970 451 642 2.4E-58 T 14-10-2018 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Pfam PF00171 Aldehyde dehydrogenase family 5 400 7.5E-24 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 Gene3D G3DSA:3.40.605.10 12 446 6.2E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 SUPERFAMILY SSF56796 452 863 2.49E-114 T 14-10-2018 BJD94_06220 b8e112fcd2af91ae105400f82337d11c 891 SUPERFAMILY SSF53720 6 454 6.54E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_07295 150eded8e54afda423ab501251076559 235 Pfam PF13861 FlgD Tudor-like domain 93 229 3.9E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain BJD94_07295 150eded8e54afda423ab501251076559 235 Gene3D G3DSA:2.30.30.910 98 222 1.4E-35 T 14-10-2018 BJD94_07295 150eded8e54afda423ab501251076559 235 Gene3D G3DSA:2.60.40.4070 110 196 1.4E-35 T 14-10-2018 BJD94_07295 150eded8e54afda423ab501251076559 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.7E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein BJD94_07295 150eded8e54afda423ab501251076559 235 Pfam PF13860 FlgD Ig-like domain 117 184 5.1E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain BJD94_17005 bd0ad11f9447113f3c3556e292531776 106 Gene3D G3DSA:2.60.120.10 1 106 4.6E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_17005 bd0ad11f9447113f3c3556e292531776 106 SUPERFAMILY SSF51182 12 104 1.65E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_17005 bd0ad11f9447113f3c3556e292531776 106 PIRSF PIRSF029883 1 106 5.8E-37 T 14-10-2018 IPR025499 Pectin degradation protein KdgF BJD94_17005 bd0ad11f9447113f3c3556e292531776 106 Pfam PF07883 Cupin domain 32 87 2.8E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BJD94_16755 6c045d2cfe2193613175e2c0411a104a 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 1.7E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_16755 6c045d2cfe2193613175e2c0411a104a 95 SUPERFAMILY SSF52794 1 91 7.59E-22 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_16755 6c045d2cfe2193613175e2c0411a104a 95 Gene3D G3DSA:3.40.50.2300 1 90 1.2E-20 T 14-10-2018 BJD94_14610 960dedd05c44c46346d915708cf1eff0 478 Gene3D G3DSA:1.20.1740.10 14 471 2.7E-7 T 14-10-2018 BJD94_14610 960dedd05c44c46346d915708cf1eff0 478 Pfam PF13520 Amino acid permease 11 442 3.8E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_14610 960dedd05c44c46346d915708cf1eff0 478 PIRSF PIRSF006060 1 476 1.9E-40 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_21335 85b204ea0c1135436342da4cdff0f3d2 157 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 4.5E-39 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.6E-53 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.3E-63 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 Gene3D G3DSA:1.10.520.20 2 106 2.2E-37 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 SUPERFAMILY SSF47928 4 105 2.62E-28 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11085 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11215 a75f079244acf72c364e278cd6971633 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 2.9E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.3E-170 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 SUPERFAMILY SSF55681 8 293 1.18E-132 T 14-10-2018 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11215 a75f079244acf72c364e278cd6971633 305 Gene3D G3DSA:1.20.58.180 216 298 1.4E-34 T 14-10-2018 BJD94_11215 a75f079244acf72c364e278cd6971633 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 14-10-2018 BJD94_11215 a75f079244acf72c364e278cd6971633 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.746 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 233 1.7E-40 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 Hamap MF_00201 DNA repair protein RecO [recO]. 4 233 22.96 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 SUPERFAMILY SSF50249 8 78 1.18E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 Pfam PF02565 Recombination protein O C terminal 88 228 3.4E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 Pfam PF11967 Recombination protein O N terminal 8 79 4.4E-23 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 Gene3D G3DSA:2.40.50.140 5 81 1.0E-32 T 14-10-2018 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 Gene3D G3DSA:1.20.1440.120 82 242 2.3E-53 T 14-10-2018 BJD94_13700 86746cf147416237f2ec59a613c40f4a 243 SUPERFAMILY SSF57863 88 168 1.67E-12 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 SUPERFAMILY SSF142754 29 341 5.23E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 Gene3D G3DSA:3.40.50.10800 115 340 5.2E-94 T 14-10-2018 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 Gene3D G3DSA:3.40.50.10800 200 295 5.2E-94 T 14-10-2018 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 Gene3D G3DSA:3.40.50.10800 32 322 5.2E-94 T 14-10-2018 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 6.9E-102 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 2.2E-114 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BJD94_01540 6d79dcb940b7764a06e4b7f0d81f4223 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.784 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BJD94_18160 b6c91362fb217a63bb6a3fb10586d693 93 SUPERFAMILY SSF51182 1 93 1.01E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_18160 b6c91362fb217a63bb6a3fb10586d693 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.2E-33 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 BJD94_18160 b6c91362fb217a63bb6a3fb10586d693 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 25.216 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 BJD94_18160 b6c91362fb217a63bb6a3fb10586d693 93 Gene3D G3DSA:2.60.120.10 1 93 6.6E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 Pfam PF02401 LytB protein 7 288 7.2E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.791 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 1.3E-96 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 Gene3D G3DSA:3.40.1010.20 10 286 8.1E-108 T 14-10-2018 BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 Gene3D G3DSA:3.40.50.11270 16 100 8.1E-108 T 14-10-2018 BJD94_08535 bcb8014996a7fbc5532aa05261f53cff 320 Gene3D G3DSA:3.40.1010.20 101 202 8.1E-108 T 14-10-2018 BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.0E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 Gene3D G3DSA:3.30.70.890 162 280 1.8E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 Gene3D G3DSA:3.30.230.10 1 160 1.7E-55 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 SUPERFAMILY SSF54211 6 159 1.21E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 Pfam PF08544 GHMP kinases C terminal 206 259 3.8E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 PIRSF PIRSF010376 4 280 1.2E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 31.41 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 279 7.5E-96 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD94_07475 b977d1e20de8cf31d2f0493947e518de 290 SUPERFAMILY SSF55060 162 277 1.29E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD94_01185 9a71eeaa3140ba2449da8cbe76f74674 644 SMART SM00763 19 380 1.5E-215 T 14-10-2018 IPR013153 PrkA AAA domain BJD94_01185 9a71eeaa3140ba2449da8cbe76f74674 644 SUPERFAMILY SSF52540 73 368 6.89E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01185 9a71eeaa3140ba2449da8cbe76f74674 644 Pfam PF08298 PrkA AAA domain 19 380 2.6E-174 T 14-10-2018 IPR013153 PrkA AAA domain BJD94_01185 9a71eeaa3140ba2449da8cbe76f74674 644 PIRSF PIRSF000549 1 644 1.3E-287 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 BJD94_01185 9a71eeaa3140ba2449da8cbe76f74674 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.5E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 3.0E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 SMART SM00382 43 238 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 SUPERFAMILY SSF52540 10 259 2.72E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 Pfam PF00005 ABC transporter 35 188 2.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_18545 75f7aa2a76cc58982b136afc92565aa9 328 Gene3D G3DSA:3.40.50.300 8 328 1.1E-84 T 14-10-2018 BJD94_18380 c87a542ef625785c826f7da35d04ca8e 203 Pfam PF02661 Fic/DOC family 57 152 4.1E-16 T 14-10-2018 IPR003812 Fido domain BJD94_18380 c87a542ef625785c826f7da35d04ca8e 203 Gene3D G3DSA:1.10.3290.10 2 202 1.1E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily BJD94_18380 c87a542ef625785c826f7da35d04ca8e 203 SUPERFAMILY SSF140931 55 194 4.97E-31 T 14-10-2018 IPR036597 Fido-like domain superfamily BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 Pfam PF02080 TrkA-C domain 154 214 1.0E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 Gene3D G3DSA:3.40.50.720 2 140 1.7E-34 T 14-10-2018 BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 Pfam PF02254 TrkA-N domain 8 123 2.4E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 SUPERFAMILY SSF116726 134 215 3.79E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 SUPERFAMILY SSF51735 6 136 1.85E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06280 6a4d9336e5c73e97092a944a4aca5e9f 220 Gene3D G3DSA:3.30.70.1450 141 216 7.7E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 Gene3D G3DSA:2.160.20.80 31 144 2.1E-14 T 14-10-2018 BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 5.1E-8 T 14-10-2018 IPR001646 Pentapeptide repeat BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 SUPERFAMILY SSF81324 229 324 3.14E-16 T 14-10-2018 BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 Gene3D G3DSA:1.10.287.70 225 325 3.4E-15 T 14-10-2018 BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 Pfam PF07885 Ion channel 237 324 1.6E-15 T 14-10-2018 IPR013099 Potassium channel domain BJD94_08100 470e81a9046bc2204dba1fb96f88b7d4 325 SUPERFAMILY SSF141571 55 140 5.23E-14 T 14-10-2018 BJD94_09910 33c489511f489bcd781ca4898aff3424 446 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 392 443 1.2E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BJD94_09910 33c489511f489bcd781ca4898aff3424 446 Gene3D G3DSA:3.40.50.10890 216 404 4.0E-130 T 14-10-2018 BJD94_09910 33c489511f489bcd781ca4898aff3424 446 Pfam PF00753 Metallo-beta-lactamase superfamily 22 98 5.2E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_09910 33c489511f489bcd781ca4898aff3424 446 Pfam PF10996 Beta-Casp domain 248 378 7.8E-26 T 14-10-2018 IPR022712 Beta-Casp domain BJD94_09910 33c489511f489bcd781ca4898aff3424 446 SMART SM01027 248 378 1.9E-51 T 14-10-2018 IPR022712 Beta-Casp domain BJD94_09910 33c489511f489bcd781ca4898aff3424 446 Gene3D G3DSA:3.60.15.10 6 439 4.0E-130 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_09910 33c489511f489bcd781ca4898aff3424 446 SUPERFAMILY SSF56281 1 443 3.25E-122 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_09910 33c489511f489bcd781ca4898aff3424 446 SMART SM00849 13 232 1.6E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 SMART SM00479 18 204 3.0E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 8.1E-100 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 Pfam PF00929 Exonuclease 20 195 4.4E-45 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 SUPERFAMILY SSF53098 10 208 1.17E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 Gene3D G3DSA:3.30.420.10 9 216 2.0E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_06185 568a6abad0681678c68ccef730e32c3d 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 115.696 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 Pfam PF12800 4Fe-4S binding domain 52 63 0.28 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 Gene3D G3DSA:3.30.70.20 44 219 7.4E-59 T 14-10-2018 BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 SUPERFAMILY SSF54862 42 224 7.12E-63 T 14-10-2018 BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 1.0E-133 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 Gene3D G3DSA:3.30.70.20 105 158 7.4E-59 T 14-10-2018 BJD94_05820 7212ef0804103c8e5f2cf980eef8878b 228 Pfam PF13247 4Fe-4S dicluster domain 91 188 4.2E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_16485 6987253ef06da80ce7ae477b62984c62 215 Pfam PF07819 PGAP1-like protein 60 166 3.3E-6 T 14-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 BJD94_16485 6987253ef06da80ce7ae477b62984c62 215 SUPERFAMILY SSF53474 8 194 2.23E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_18830 f91ab37d18c17d17dba5952a7052ed39 146 Gene3D G3DSA:3.40.930.10 1 146 2.5E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18830 f91ab37d18c17d17dba5952a7052ed39 146 SUPERFAMILY SSF55804 1 144 9.42E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18830 f91ab37d18c17d17dba5952a7052ed39 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 5.2E-30 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_15415 adcec3006f00313925fa21914e80e0f2 265 SUPERFAMILY SSF52096 8 264 1.59E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_15415 adcec3006f00313925fa21914e80e0f2 265 Gene3D G3DSA:3.90.226.10 9 265 2.9E-79 T 14-10-2018 BJD94_15415 adcec3006f00313925fa21914e80e0f2 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BJD94_15415 adcec3006f00313925fa21914e80e0f2 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 6.1E-58 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 4.5E-113 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Gene3D G3DSA:3.40.50.720 222 388 1.4E-68 T 14-10-2018 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 SUPERFAMILY SSF48179 191 287 2.21E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 PIRSF PIRSF500134 1 343 6.1E-117 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 PIRSF PIRSF500134 338 388 0.0064 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Gene3D G3DSA:3.40.50.720 1 193 4.6E-55 T 14-10-2018 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 9.9E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.2E-28 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 SUPERFAMILY SSF51735 1 194 1.01E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 PIRSF PIRSF000124 1 388 2.7E-135 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Gene3D G3DSA:1.20.5.100 194 220 9.5E-20 T 14-10-2018 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 SUPERFAMILY SSF52413 283 387 1.96E-28 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 SMART SM00984 300 387 2.1E-14 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD94_09930 e10366332d9a8cc05c0a475f00df79c9 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.0E-8 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD94_16855 f240071a985e6b8d050c3d8ca44e3f34 163 Gene3D G3DSA:1.25.40.10 49 154 1.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_16855 f240071a985e6b8d050c3d8ca44e3f34 163 Pfam PF12688 Tetratrico peptide repeat 41 156 2.9E-12 T 14-10-2018 BJD94_16855 f240071a985e6b8d050c3d8ca44e3f34 163 SUPERFAMILY SSF48452 5 152 3.45E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_09380 5af688625bf04c0b05abe8fb4d17803d 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 3.7E-23 T 14-10-2018 IPR006869 Domain of unknown function DUF547 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 SUPERFAMILY SSF56796 4 357 2.62E-119 T 14-10-2018 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 PIRSF PIRSF001455 4 362 3.8E-108 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 Gene3D G3DSA:1.20.1090.10 173 362 1.8E-71 T 14-10-2018 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 Pfam PF01761 3-dehydroquinate synthase 68 325 1.9E-111 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 Gene3D G3DSA:3.40.50.1970 1 172 2.9E-66 T 14-10-2018 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 3.6E-122 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD94_12810 40db65d6c87232b9b23afb08fc8975c1 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 74.178 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD94_14575 031d776056ef87f9cafedd462761a1d4 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 9.9E-19 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_14575 031d776056ef87f9cafedd462761a1d4 321 Gene3D G3DSA:1.20.81.30 145 257 1.3E-6 T 14-10-2018 BJD94_00150 ece1a3cc8cdfcbb97e6581bac6fe4e24 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 3.0E-27 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BJD94_00150 ece1a3cc8cdfcbb97e6581bac6fe4e24 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 2.8E-36 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BJD94_00150 ece1a3cc8cdfcbb97e6581bac6fe4e24 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 28.339 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 BJD94_08285 06bd2955f806434063846619a6d7152f 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 5.3E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD94_08285 06bd2955f806434063846619a6d7152f 350 Gene3D G3DSA:2.40.10.240 64 163 1.4E-117 T 14-10-2018 BJD94_08285 06bd2955f806434063846619a6d7152f 350 Gene3D G3DSA:3.40.1780.10 14 345 1.4E-117 T 14-10-2018 BJD94_08285 06bd2955f806434063846619a6d7152f 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 46.999 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD94_08285 06bd2955f806434063846619a6d7152f 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.0E-157 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD94_08285 06bd2955f806434063846619a6d7152f 350 SUPERFAMILY SSF111337 1 345 2.88E-137 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.0E-10 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF46604 89 138 2.28E-13 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 3.4E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:1.20.5.440 92 135 6.4E-18 T 14-10-2018 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:2.60.15.10 4 91 8.5E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.6E-43 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11065 f50477ca2a47fd6b4f70fa3c99c223dd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.511 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_17660 78a233d3fefa879376ec5ab14a3a16d7 231 PIRSF PIRSF028137 1 231 2.9E-108 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 Gene3D G3DSA:3.40.50.450 4 287 5.7E-117 T 14-10-2018 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.536 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 Pfam PF00365 Phosphofructokinase 4 276 6.8E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PIRSF PIRSF000532 1 320 1.5E-127 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 Gene3D G3DSA:3.40.50.460 143 252 5.7E-117 T 14-10-2018 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 3.1E-130 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BJD94_12175 5412b824dce7310c7c06ac3e3c5296f7 320 SUPERFAMILY SSF53784 3 310 3.79E-113 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD94_11160 68c0b2a0557a598f68be0f5120f076f8 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_11160 68c0b2a0557a598f68be0f5120f076f8 223 Gene3D G3DSA:1.10.3720.10 1 222 2.7E-53 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_11160 68c0b2a0557a598f68be0f5120f076f8 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 7.2E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_11160 68c0b2a0557a598f68be0f5120f076f8 223 SUPERFAMILY SSF161098 13 203 2.22E-43 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.2E-176 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.6E-43 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF143856 118 234 3.66E-47 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.30.70.1250 116 237 6.3E-150 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.676 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.40.720.10 3 406 6.3E-150 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 PIRSF PIRSF001491 1 406 2.3E-160 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BJD94_14455 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 1 406 1.05E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_16040 ee44ae8bda596fd68374c3c2f13736c8 183 SUPERFAMILY SSF56925 29 183 1.14E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_16040 ee44ae8bda596fd68374c3c2f13736c8 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 2.4E-8 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_16040 ee44ae8bda596fd68374c3c2f13736c8 183 Gene3D G3DSA:2.40.160.20 19 183 3.0E-15 T 14-10-2018 BJD94_16925 38f92fc174e4ceb9dd5bb3f11f75d491 292 Pfam PF00892 EamA-like transporter family 145 270 1.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_16925 38f92fc174e4ceb9dd5bb3f11f75d491 292 Pfam PF00892 EamA-like transporter family 9 139 1.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_16925 38f92fc174e4ceb9dd5bb3f11f75d491 292 SUPERFAMILY SSF103481 43 143 2.35E-14 T 14-10-2018 BJD94_16925 38f92fc174e4ceb9dd5bb3f11f75d491 292 SUPERFAMILY SSF103481 180 280 4.18E-13 T 14-10-2018 BJD94_12710 4bc42f11129d3d17d58130117abfe0a2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.2E-59 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BJD94_12710 4bc42f11129d3d17d58130117abfe0a2 105 SUPERFAMILY SSF47598 3 103 4.0E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD94_12710 4bc42f11129d3d17d58130117abfe0a2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.305 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BJD94_12710 4bc42f11129d3d17d58130117abfe0a2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-49 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 BJD94_12710 4bc42f11129d3d17d58130117abfe0a2 105 Gene3D G3DSA:1.10.140.10 2 105 2.1E-56 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily BJD94_21545 a6e57c7d89feb992c1122eaae196e136 370 Pfam PF13729 F plasmid transfer operon, TraF, protein 46 287 2.2E-64 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.7E-42 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 9.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 9.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 Gene3D G3DSA:1.10.357.10 1 208 1.3E-65 T 14-10-2018 BJD94_12250 a68ce82ce0910ac51f43298133480ca9 211 SUPERFAMILY SSF46689 2 72 1.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 SUPERFAMILY SSF100950 63 294 6.7E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 Pfam PF11870 Domain of unknown function (DUF3390) 384 471 1.8E-27 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 454 5.0E-149 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 Pfam PF13183 4Fe-4S dicluster domain 310 376 2.6E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 SUPERFAMILY SSF46548 285 388 5.58E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 Gene3D G3DSA:3.40.50.10420 134 289 3.9E-13 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 Gene3D G3DSA:1.10.1060.10 290 394 4.5E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_16455 2f30bd87db8bb752f915dd5434c61a95 476 Pfam PF02589 LUD domain 68 293 2.2E-52 T 14-10-2018 IPR003741 LUD domain BJD94_04790 205875efc904d3ac33ed981b9f9e33da 186 PIRSF PIRSF006135 6 183 5.8E-55 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 BJD94_04790 205875efc904d3ac33ed981b9f9e33da 186 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 179 8.4E-61 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 BJD94_04790 205875efc904d3ac33ed981b9f9e33da 186 Gene3D G3DSA:3.40.50.300 7 181 2.8E-57 T 14-10-2018 BJD94_04790 205875efc904d3ac33ed981b9f9e33da 186 SUPERFAMILY SSF52540 8 181 1.23E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 2.8E-98 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 Gene3D G3DSA:2.60.98.20 154 315 4.2E-23 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 1.3E-23 T 14-10-2018 IPR011491 Flagellar hook protein FlgE BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 PRINTS PR01005 Flagellar hook-associated protein signature 8 31 6.4E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 PRINTS PR01005 Flagellar hook-associated protein signature 239 261 6.4E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 SUPERFAMILY SSF117143 78 395 1.31E-72 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD94_07290 eb134eaf73f69c83b24e9ba60c006e3d 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 8.4E-16 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 1.7E-39 T 14-10-2018 IPR000160 GGDEF domain BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 694 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 Gene3D G3DSA:3.30.450.40 171 344 5.3E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 Gene3D G3DSA:3.30.70.270 517 700 1.7E-46 T 14-10-2018 BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 SUPERFAMILY SSF55073 537 699 7.22E-38 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 SUPERFAMILY SSF55781 341 511 5.45E-7 T 14-10-2018 BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 SUPERFAMILY SSF55781 178 332 3.49E-7 T 14-10-2018 BJD94_19675 ef9ddf24ec22dfb037c2571d9e4a7b6d 706 SMART SM00267 521 698 2.3E-47 T 14-10-2018 IPR000160 GGDEF domain BJD94_21315 e053e65a06c918a44527b797866fedd8 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 4.3E-31 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD94_21315 e053e65a06c918a44527b797866fedd8 179 SUPERFAMILY SSF81342 3 176 3.3E-37 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 SUPERFAMILY SSF51161 1 262 4.72E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 PIRSF PIRSF000456 4 262 5.6E-110 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.003 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.2E-30 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Gene3D G3DSA:2.160.10.10 1 196 1.1E-54 T 14-10-2018 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Gene3D G3DSA:1.20.1180.10 197 262 9.8E-26 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.3E-111 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 32 4.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_00295 211b0a4aebbc29f8a27043fbacdcf6f2 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_14400 f06bce020ba2ae3e19fffb8e3384f1dc 159 Pfam PF02036 SCP-2 sterol transfer family 26 118 3.3E-19 T 14-10-2018 IPR003033 SCP2 sterol-binding domain BJD94_14400 f06bce020ba2ae3e19fffb8e3384f1dc 159 Gene3D G3DSA:3.30.1050.10 12 123 2.5E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_14400 f06bce020ba2ae3e19fffb8e3384f1dc 159 SUPERFAMILY SSF55718 28 123 6.36E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_14400 f06bce020ba2ae3e19fffb8e3384f1dc 159 PIRSF PIRSF025550 1 158 1.1E-76 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT BJD94_19610 d02c77fe2fc81e5bee4aa1ff99803241 92 SUPERFAMILY SSF58042 20 91 1.73E-13 T 14-10-2018 BJD94_19610 d02c77fe2fc81e5bee4aa1ff99803241 92 Gene3D G3DSA:1.20.5.190 25 91 5.5E-7 T 14-10-2018 BJD94_19610 d02c77fe2fc81e5bee4aa1ff99803241 92 Pfam PF04728 Lipoprotein leucine-zipper 33 92 9.7E-16 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 BJD94_19610 d02c77fe2fc81e5bee4aa1ff99803241 92 PIRSF PIRSF002855 1 92 7.0E-29 T 14-10-2018 IPR016367 Murein-lipoprotein BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.0E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:1.10.10.10 1 56 6.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:3.40.50.1360 73 223 3.8E-5 T 14-10-2018 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF100950 76 233 1.74E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM00420 9 61 2.4E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM01134 73 234 1.4E-55 T 14-10-2018 BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.3E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain BJD94_09305 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF46785 9 68 6.92E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.715 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 1.1E-18 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:2.30.30.20 101 153 1.6E-23 T 14-10-2018 BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF54893 2 100 1.44E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF57825 101 151 5.1E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.9E-59 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:3.30.70.140 1 100 1.2E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily BJD94_13200 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.6E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:3.90.1600.10 350 456 2.0E-29 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Pfam PF00136 DNA polymerase family B 378 746 4.2E-43 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:3.30.420.10 158 349 1.4E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:3.90.1600.30 518 639 4.2E-8 T 14-10-2018 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 82 298 2.3E-16 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 SUPERFAMILY SSF56672 387 783 3.78E-114 T 14-10-2018 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 SUPERFAMILY SSF53098 5 391 1.11E-85 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:1.10.132.60 645 789 2.2E-59 T 14-10-2018 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 SMART SM00486 155 560 7.9E-61 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:3.30.70.2250 41 110 1.8E-39 T 14-10-2018 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:2.40.50.590 6 155 1.8E-39 T 14-10-2018 BJD94_05940 b721208cc2416dd158ea8888fd1d9220 789 Gene3D G3DSA:1.10.287.690 470 516 1.3E-25 T 14-10-2018 BJD94_20040 1d2b5ccf3e7a2a5fffde77655b7d93b2 211 Gene3D G3DSA:1.20.1250.20 7 201 3.3E-5 T 14-10-2018 BJD94_20040 1d2b5ccf3e7a2a5fffde77655b7d93b2 211 SUPERFAMILY SSF103473 10 197 3.53E-8 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.791 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.1E-31 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 4.2E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 Gene3D G3DSA:3.40.50.720 1 399 1.3E-180 T 14-10-2018 BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.5E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04980 caf29967cdf265ba680ab6182012d1c3 400 SUPERFAMILY SSF51735 40 142 6.17E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 SUPERFAMILY SSF58104 234 542 3.01E-72 T 14-10-2018 BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 SMART SM00283 280 541 8.3E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 2.7E-19 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 Gene3D G3DSA:1.10.287.950 211 543 1.8E-74 T 14-10-2018 BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 505 2.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15340 cf76d6c57ba92fc83937bb7e47ccc3f1 543 SMART SM00304 211 265 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_12685 a7d11d648823ba524f1fcf0e4ed005fe 185 SUPERFAMILY SSF110997 110 181 1.29E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_12685 a7d11d648823ba524f1fcf0e4ed005fe 185 Pfam PF05036 Sporulation related domain 111 180 2.3E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_12685 a7d11d648823ba524f1fcf0e4ed005fe 185 Gene3D G3DSA:3.30.70.1070 104 183 4.3E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_20900 6abe9c46b3bbc83a42adec3c5134c7c9 275 SUPERFAMILY SSF53850 24 271 2.81E-62 T 14-10-2018 BJD94_20900 6abe9c46b3bbc83a42adec3c5134c7c9 275 Gene3D G3DSA:3.40.190.10 26 267 3.7E-77 T 14-10-2018 BJD94_20900 6abe9c46b3bbc83a42adec3c5134c7c9 275 Gene3D G3DSA:3.40.190.10 97 231 3.7E-77 T 14-10-2018 BJD94_20900 6abe9c46b3bbc83a42adec3c5134c7c9 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 21 268 6.1E-64 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 BJD94_20900 6abe9c46b3bbc83a42adec3c5134c7c9 275 Pfam PF12849 PBP superfamily domain 22 253 9.8E-35 T 14-10-2018 IPR024370 PBP domain BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Pfam PF04055 Radical SAM superfamily 151 325 4.6E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.834 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.6E-152 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Gene3D G3DSA:3.80.30.20 145 377 2.4E-83 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 5.9E-198 T 14-10-2018 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Pfam PF01938 TRAM domain 379 440 4.8E-18 T 14-10-2018 IPR002792 TRAM domain BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 Gene3D G3DSA:3.40.50.12160 3 138 3.1E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 SUPERFAMILY SSF102114 123 374 3.4E-62 T 14-10-2018 BJD94_07575 16e145c3c3d6de6ff31f6a35704c5c83 474 SMART SM00729 147 367 3.2E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_09450 98c41317f0b5a717ad16941d0dfd976c 323 Gene3D G3DSA:1.10.600.10 1 323 2.7E-121 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD94_09450 98c41317f0b5a717ad16941d0dfd976c 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD94_09450 98c41317f0b5a717ad16941d0dfd976c 323 Pfam PF00348 Polyprenyl synthetase 32 268 6.8E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BJD94_09450 98c41317f0b5a717ad16941d0dfd976c 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD94_09450 98c41317f0b5a717ad16941d0dfd976c 323 SUPERFAMILY SSF48576 4 322 1.26E-100 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD94_19535 67c15cda9772fe324cd2e25e0b954fad 182 Gene3D G3DSA:1.10.1760.20 1 177 1.1E-19 T 14-10-2018 BJD94_19535 67c15cda9772fe324cd2e25e0b954fad 182 Hamap MF_01572 UPF0397 protein . 1 182 21.039 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 BJD94_19535 67c15cda9772fe324cd2e25e0b954fad 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 5.1E-44 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.6E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Gene3D G3DSA:3.40.50.300 59 317 3.6E-108 T 14-10-2018 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Gene3D G3DSA:3.30.50.30 2 53 1.9E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 SMART SM01086 319 414 7.7E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 SUPERFAMILY SSF52540 63 404 7.34E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.477 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.2E-210 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BJD94_06610 3b757396cff6ec6b3b5f7c8365009644 426 Gene3D G3DSA:1.10.8.60 318 426 2.3E-41 T 14-10-2018 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 Pfam PF01979 Amidohydrolase family 52 364 5.7E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 PIRSF PIRSF001238 1 378 2.7E-145 T 14-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 SUPERFAMILY SSF51338 1 376 1.56E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 SUPERFAMILY SSF51556 56 334 6.01E-71 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 Gene3D G3DSA:2.30.40.10 4 378 5.4E-139 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 Gene3D G3DSA:3.20.20.140 57 333 5.4E-139 T 14-10-2018 BJD94_17800 c9e78eaf843fb673221557d204a0805a 378 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 378 2.7E-115 T 14-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 PIRSF PIRSF015761 20 402 1.6E-31 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 401 4.8E-98 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 Gene3D G3DSA:3.30.1360.100 317 403 6.7E-29 T 14-10-2018 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 Pfam PF12693 GspL periplasmic domain 245 402 6.1E-54 T 14-10-2018 IPR025691 GspL periplasmic domain BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 SUPERFAMILY SSF53067 6 148 9.06E-44 T 14-10-2018 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 Gene3D G3DSA:3.30.420.370 146 215 4.2E-88 T 14-10-2018 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 SUPERFAMILY SSF53067 150 238 5.83E-22 T 14-10-2018 BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 Pfam PF05134 Type II secretion system (T2SS), protein L 9 240 1.2E-76 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BJD94_10440 8a0a1a3ee5488ebf634f166303b5eadf 403 Gene3D G3DSA:3.30.420.380 8 237 4.2E-88 T 14-10-2018 BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 Gene3D G3DSA:3.50.50.60 93 405 2.6E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 Gene3D G3DSA:3.30.9.10 134 362 2.6E-54 T 14-10-2018 BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 SUPERFAMILY SSF51905 1 414 1.2E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.913 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 Gene3D G3DSA:3.50.50.60 1 78 1.9E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 SUPERFAMILY SSF54373 270 360 1.96E-17 T 14-10-2018 BJD94_08110 bcd97c7a4009a9f6a71f728c438945f8 417 Pfam PF01266 FAD dependent oxidoreductase 3 397 2.5E-71 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_00280 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Gene3D G3DSA:3.30.910.20 22 166 2.1E-34 T 14-10-2018 IPR024930 Skp domain superfamily BJD94_00280 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SMART SM00935 12 166 1.1E-39 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BJD94_00280 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 PIRSF PIRSF002094 1 166 1.9E-38 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BJD94_00280 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SUPERFAMILY SSF111384 23 165 1.44E-29 T 14-10-2018 BJD94_00280 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 3.1E-25 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 BJD94_14620 8b1f8d390079603716fc4f7a1276545d 150 SUPERFAMILY SSF51197 1 143 1.07E-24 T 14-10-2018 BJD94_14620 8b1f8d390079603716fc4f7a1276545d 150 Gene3D G3DSA:2.60.120.370 1 143 8.6E-15 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily BJD94_14620 8b1f8d390079603716fc4f7a1276545d 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 3.4E-25 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 Gene3D G3DSA:1.10.3210.10 307 499 2.3E-59 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 302 5.0E-99 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 SUPERFAMILY SSF109604 309 498 1.48E-48 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 Gene3D G3DSA:3.30.420.150 113 291 2.0E-88 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 SUPERFAMILY SSF53067 135 304 4.26E-45 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 SUPERFAMILY SSF53067 9 128 1.6E-35 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 Gene3D G3DSA:3.30.420.40 10 299 2.0E-88 T 14-10-2018 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 Pfam PF02541 Ppx/GppA phosphatase family 22 302 1.9E-82 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BJD94_08355 e1c36ce139a15557220063e9502f3bdd 499 PIRSF PIRSF001267 1 499 4.5E-196 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BJD94_09860 e42ef59624df434beee326673e58f593 92 Pfam PF00203 Ribosomal protein S19 3 83 3.5E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 Gene3D G3DSA:3.30.860.10 1 92 1.4E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.647 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 SUPERFAMILY SSF54570 3 84 2.62E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09860 e42ef59624df434beee326673e58f593 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.2E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD94_09860 e42ef59624df434beee326673e58f593 92 PIRSF PIRSF002144 1 92 3.0E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 Gene3D G3DSA:3.20.20.140 60 358 1.9E-158 T 14-10-2018 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 SUPERFAMILY SSF51338 1 397 6.92E-26 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 Gene3D G3DSA:2.30.40.10 7 395 1.9E-158 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 SUPERFAMILY SSF51556 59 358 3.26E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.851 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 396 5.6E-152 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02615 6cd91fbb244fdaa16b65f721fda03cc6 406 Pfam PF01979 Amidohydrolase family 56 373 4.3E-13 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_17565 ee1eadf2c28edbf87a945d154fa63203 150 SUPERFAMILY SSF47175 27 147 2.06E-24 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 BJD94_17565 ee1eadf2c28edbf87a945d154fa63203 150 Pfam PF01322 Cytochrome C' 32 147 7.0E-21 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 BJD94_17565 ee1eadf2c28edbf87a945d154fa63203 150 Gene3D G3DSA:1.20.120.10 26 149 1.9E-21 T 14-10-2018 BJD94_15650 dfee43f6d754f0bdc00604a4e1f3f148 323 Pfam PF03595 Voltage-dependent anion channel 16 308 7.5E-26 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 BJD94_15650 dfee43f6d754f0bdc00604a4e1f3f148 323 Gene3D G3DSA:1.50.10.150 10 314 2.0E-32 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 Gene3D G3DSA:1.10.287.950 204 533 1.2E-72 T 14-10-2018 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 SMART SM01049 36 123 2.2E-21 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 SUPERFAMILY SSF58104 224 533 5.75E-72 T 14-10-2018 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 Pfam PF17200 Single Cache domain 2 40 180 4.9E-29 T 14-10-2018 IPR033480 Single Cache domain 2 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 Gene3D G3DSA:3.30.450.20 37 180 1.1E-31 T 14-10-2018 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 SMART SM00283 271 532 7.2E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 Pfam PF00672 HAMP domain 205 249 2.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 498 5.8E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 SMART SM00304 257 309 57.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_14660 f23c5be3df91a1bb331e0eafb06bdf55 533 SMART SM00304 204 256 9.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_09965 8ee098b663f52124b6dbe2aab7f73c51 373 SUPERFAMILY SSF53756 1 356 2.76E-21 T 14-10-2018 BJD94_09965 8ee098b663f52124b6dbe2aab7f73c51 373 Gene3D G3DSA:3.40.50.2000 194 350 1.0E-10 T 14-10-2018 BJD94_09965 8ee098b663f52124b6dbe2aab7f73c51 373 Pfam PF13692 Glycosyl transferases group 1 211 336 1.7E-6 T 14-10-2018 BJD94_05275 3fe144f3546c66134c706e1eb4f56778 394 Gene3D G3DSA:1.10.3820.10 15 192 8.4E-39 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BJD94_05275 3fe144f3546c66134c706e1eb4f56778 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 2.3E-72 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BJD94_05275 3fe144f3546c66134c706e1eb4f56778 394 PIRSF PIRSF000014 1 394 1.2E-161 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BJD94_05275 3fe144f3546c66134c706e1eb4f56778 394 SUPERFAMILY SSF48695 13 187 6.55E-61 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_05275 3fe144f3546c66134c706e1eb4f56778 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.4E-188 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:2.120.10.90 497 734 1.5E-14 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 2.1E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 637 0.0075 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.90.199.10 34 483 1.7E-178 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF56719 33 485 5.75E-154 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF101904 499 743 4.45E-51 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 1.0E-135 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.30.1360.40 240 333 1.7E-178 T 14-10-2018 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:1.10.268.10 371 456 1.7E-178 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.661 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 SMART SM00434 13 463 1.1E-227 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_09020 f94f54cc5e05434df5dd4f65d6c62330 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 439 1.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 SMART SM00388 222 286 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 285 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 SUPERFAMILY SSF47384 207 284 2.75E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 Gene3D G3DSA:3.30.565.10 321 447 5.5E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 SMART SM00387 331 441 1.9E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 SUPERFAMILY SSF55874 329 441 5.76E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_16370 24516677cbf33dce23a5c7661268bf5e 466 Gene3D G3DSA:1.10.287.130 173 286 4.0E-17 T 14-10-2018 BJD94_16830 e8fd3a78b14a73e5a11f65e85779694a 418 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 205 415 4.4E-33 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_16830 e8fd3a78b14a73e5a11f65e85779694a 418 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 45 197 4.5E-18 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_16830 e8fd3a78b14a73e5a11f65e85779694a 418 SUPERFAMILY SSF56935 45 417 1.56E-65 T 14-10-2018 BJD94_16830 e8fd3a78b14a73e5a11f65e85779694a 418 Gene3D G3DSA:2.40.160.60 45 418 3.2E-71 T 14-10-2018 BJD94_15190 5583762db21df5abccbe9caffad92fdd 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 2.7E-37 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN BJD94_15190 5583762db21df5abccbe9caffad92fdd 151 Gene3D G3DSA:2.60.40.4150 22 151 2.4E-37 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily BJD94_15190 5583762db21df5abccbe9caffad92fdd 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 146 3.2E-45 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 SMART SM00642 126 522 3.4E-93 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 Pfam PF00128 Alpha amylase, catalytic domain 178 495 1.3E-81 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 PIRSF PIRSF036918 1 612 1.3E-269 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 Gene3D G3DSA:3.20.20.80 114 524 1.8E-142 T 14-10-2018 BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 SUPERFAMILY SSF81296 1 109 1.59E-24 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 Gene3D G3DSA:2.60.40.10 4 110 5.3E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 Gene3D G3DSA:2.60.40.1180 526 611 2.0E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 SUPERFAMILY SSF51445 114 531 1.02E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 6 109 1.9E-8 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 BJD94_01805 5f6c89133c150b8005d9f1b5532fb26d 612 SUPERFAMILY SSF51011 531 611 2.01E-10 T 14-10-2018 BJD94_03675 c7a5c148da2f3f18b05027c3fd9b8ff0 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 6.4E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD94_03675 c7a5c148da2f3f18b05027c3fd9b8ff0 95 Gene3D G3DSA:3.30.2310.20 1 92 9.8E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_03055 c7a5c148da2f3f18b05027c3fd9b8ff0 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 6.4E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD94_03055 c7a5c148da2f3f18b05027c3fd9b8ff0 95 Gene3D G3DSA:3.30.2310.20 1 92 9.8E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 653 3.4E-28 T 14-10-2018 IPR000160 GGDEF domain BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 185 4.3E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Gene3D G3DSA:3.30.70.270 502 655 5.0E-33 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 SMART SM00062 26 219 5.9E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Gene3D G3DSA:3.40.190.10 254 457 5.0E-22 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 436 4.9E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 SUPERFAMILY SSF53850 41 209 2.17E-23 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Gene3D G3DSA:3.40.190.10 41 194 5.9E-18 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Gene3D G3DSA:3.40.190.10 99 184 5.9E-18 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Gene3D G3DSA:3.40.190.10 333 432 5.0E-22 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 SMART SM00267 497 656 1.6E-24 T 14-10-2018 IPR000160 GGDEF domain BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 509 653 1.2E-27 T 14-10-2018 IPR000160 GGDEF domain BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 SUPERFAMILY SSF53850 251 466 1.98E-25 T 14-10-2018 BJD94_06410 eea040bf5e05ee9f8a64b10b1c3bbe00 657 SUPERFAMILY SSF55073 513 652 2.12E-28 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 Gene3D G3DSA:3.40.190.10 182 280 1.4E-59 T 14-10-2018 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 SUPERFAMILY SSF46785 7 86 1.69E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 Gene3D G3DSA:1.10.10.10 2 88 3.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 Pfam PF03466 LysR substrate binding domain 97 307 1.2E-30 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 Gene3D G3DSA:3.40.190.10 94 304 1.4E-59 T 14-10-2018 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_10810 ea1c2a4e09ddfc6e51a1786cba89dd69 313 SUPERFAMILY SSF53850 92 307 4.13E-50 T 14-10-2018 BJD94_20270 5c5ab9d103400e9e3518c415eedfffd7 282 Gene3D G3DSA:1.25.40.10 97 265 3.2E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_20270 5c5ab9d103400e9e3518c415eedfffd7 282 SMART SM00028 220 253 0.0027 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_20270 5c5ab9d103400e9e3518c415eedfffd7 282 SMART SM00028 186 219 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_20270 5c5ab9d103400e9e3518c415eedfffd7 282 Pfam PF13181 Tetratricopeptide repeat 220 252 1.3E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_20270 5c5ab9d103400e9e3518c415eedfffd7 282 SUPERFAMILY SSF48452 172 255 1.22E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 Pfam PF03466 LysR substrate binding domain 98 300 2.4E-13 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 SUPERFAMILY SSF53850 92 301 5.84E-30 T 14-10-2018 BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 Gene3D G3DSA:3.40.190.10 92 298 6.6E-33 T 14-10-2018 BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 SUPERFAMILY SSF46785 6 87 2.92E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 Gene3D G3DSA:3.40.190.10 176 274 6.6E-33 T 14-10-2018 BJD94_02110 706200ee8a76225aa3137ca55b01946c 305 Gene3D G3DSA:1.10.10.10 3 89 8.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15515 ab9754784d19f581aff1285aa4308181 465 Pfam PF07690 Major Facilitator Superfamily 35 396 3.4E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_15515 ab9754784d19f581aff1285aa4308181 465 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 9.6E-140 T 14-10-2018 BJD94_15515 ab9754784d19f581aff1285aa4308181 465 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BJD94_15515 ab9754784d19f581aff1285aa4308181 465 PIRSF PIRSF002808 9 460 4.9E-109 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BJD94_15515 ab9754784d19f581aff1285aa4308181 465 Gene3D G3DSA:1.20.1250.20 28 230 9.5E-34 T 14-10-2018 BJD94_15515 ab9754784d19f581aff1285aa4308181 465 SUPERFAMILY SSF103473 17 450 1.96E-59 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_15515 ab9754784d19f581aff1285aa4308181 465 Gene3D G3DSA:1.20.1250.20 246 459 3.4E-38 T 14-10-2018 BJD94_04690 1519ce13232793d28e2650ba73a59c72 339 SUPERFAMILY SSF56529 77 333 2.49E-56 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD94_04690 1519ce13232793d28e2650ba73a59c72 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 2.5E-40 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BJD94_04690 1519ce13232793d28e2650ba73a59c72 339 Gene3D G3DSA:3.90.850.10 1 339 9.5E-138 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 Gene3D G3DSA:3.40.50.300 1 206 6.0E-57 T 14-10-2018 BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 Pfam PF00005 ABC transporter 1 148 7.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 197 4.9E-84 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 SMART SM00382 10 197 6.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11705 fab39cfe8043dc4b427b28bca62da369 208 SUPERFAMILY SSF52540 1 203 2.3E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15620 f96c01685bdbab33a87aa0f8a2dd463a 295 PIRSF PIRSF028200 14 294 3.6E-110 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 Gene3D G3DSA:2.10.70.40 195 246 7.5E-46 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 1.8E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 Gene3D G3DSA:1.10.530.10 161 299 7.5E-46 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 Pfam PF10135 Rod binding protein 53 102 8.3E-14 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 221 242 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 156 179 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 243 264 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 286 304 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 PRINTS PR01002 Flagellar protein FlgJ signature 180 198 2.7E-28 T 14-10-2018 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 303 3.9E-111 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 BJD94_07265 a20af01c4de1243ed99ee6d75c96a304 306 SMART SM00047 146 305 1.0E-50 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 SUPERFAMILY SSF52540 25 230 4.2E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 Gene3D G3DSA:3.40.50.300 11 166 1.8E-6 T 14-10-2018 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 SUPERFAMILY SSF48452 442 805 2.25E-155 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 1.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 Gene3D G3DSA:1.25.40.10 443 811 1.0E-82 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 SMART SM00421 836 893 7.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 40.66 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 SUPERFAMILY SSF46894 831 894 9.18E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_18315 d72c7b6ad7de42d0afc0cdd1b959adc8 902 Gene3D G3DSA:1.10.10.10 829 900 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 Gene3D G3DSA:2.30.30.60 135 184 2.4E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 Pfam PF05552 Conserved TM helix 21 69 1.0E-12 T 14-10-2018 IPR008910 Conserved TM helix BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 SUPERFAMILY SSF50182 120 185 1.21E-17 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 Gene3D G3DSA:3.30.70.100 185 279 1.2E-29 T 14-10-2018 BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 SUPERFAMILY SSF82861 33 118 6.67E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 Pfam PF00924 Mechanosensitive ion channel 77 274 3.9E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BJD94_13570 b53815d2d0ff451c0dd8593b3f13eb1a 287 SUPERFAMILY SSF82689 187 284 2.62E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD94_16565 76657ef8f87d190cbe474073fc8145bd 186 SUPERFAMILY SSF50475 8 113 2.8E-10 T 14-10-2018 BJD94_16565 76657ef8f87d190cbe474073fc8145bd 186 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 8 98 3.7E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_16565 76657ef8f87d190cbe474073fc8145bd 186 Gene3D G3DSA:2.30.110.10 3 127 1.4E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 SUPERFAMILY SSF46689 1081 1128 1.21E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 SUPERFAMILY SSF50969 128 436 5.41E-8 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 Gene3D G3DSA:2.130.10.10 459 619 1.1E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1082 1123 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 Gene3D G3DSA:2.130.10.10 328 458 3.1E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 Gene3D G3DSA:2.130.10.10 42 315 4.9E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 SUPERFAMILY SSF63829 377 559 3.27E-14 T 14-10-2018 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 SMART SM00342 1045 1127 1.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 Gene3D G3DSA:1.10.10.60 1026 1132 1.2E-22 T 14-10-2018 BJD94_06930 0600f4045f5b4e5fe2f377efb43351f1 1134 Pfam PF12833 Helix-turn-helix domain 1052 1127 1.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_00210 f64ac99d8bf692598baac0f83b199fef 104 Pfam PF04287 tRNA pseudouridine synthase C 8 101 1.2E-31 T 14-10-2018 IPR023376 YqcC-like domain BJD94_00210 f64ac99d8bf692598baac0f83b199fef 104 Gene3D G3DSA:1.20.1440.40 1 103 1.2E-31 T 14-10-2018 IPR036814 YqcC-like superfamily BJD94_00210 f64ac99d8bf692598baac0f83b199fef 104 SUPERFAMILY SSF158452 1 102 1.96E-33 T 14-10-2018 IPR036814 YqcC-like superfamily BJD94_00210 f64ac99d8bf692598baac0f83b199fef 104 PIRSF PIRSF006257 1 104 3.0E-41 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 BJD94_01970 f0b703a0c74b586b92c505f4e50ddef2 541 SMART SM00304 203 256 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_01970 f0b703a0c74b586b92c505f4e50ddef2 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 497 5.8E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01970 f0b703a0c74b586b92c505f4e50ddef2 541 Gene3D G3DSA:1.10.287.950 203 534 7.9E-63 T 14-10-2018 BJD94_01970 f0b703a0c74b586b92c505f4e50ddef2 541 SMART SM00283 271 532 6.1E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_01970 f0b703a0c74b586b92c505f4e50ddef2 541 SUPERFAMILY SSF58104 224 536 2.75E-60 T 14-10-2018 BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 Gene3D G3DSA:3.40.30.10 1 89 5.5E-26 T 14-10-2018 BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 Pfam PF00462 Glutaredoxin 4 63 1.1E-21 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 6.2E-33 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 60 73 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 46 59 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 4 22 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup BJD94_17645 8ccc18790635281466e77fe412dfa17c 89 SUPERFAMILY SSF52833 3 84 3.31E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 Gene3D G3DSA:2.60.120.10 143 249 5.0E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 Gene3D G3DSA:2.60.120.10 18 275 5.0E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 Pfam PF02678 Pirin 31 121 7.0E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 Pfam PF05726 Pirin C-terminal cupin domain 182 278 7.3E-25 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 SUPERFAMILY SSF51182 8 278 1.11E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_18165 d497b84258f4cb0916e93d8c48af48d3 281 PIRSF PIRSF006232 3 281 3.1E-80 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BJD94_18475 5856f7e61ccd3a67dc0338e9b27cecf6 153 Pfam PF00174 Oxidoreductase molybdopterin binding domain 39 126 7.2E-5 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BJD94_18475 5856f7e61ccd3a67dc0338e9b27cecf6 153 SUPERFAMILY SSF56524 18 151 6.54E-15 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 2.2E-162 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 130 143 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 256 276 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 333 347 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 181 196 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 313 329 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PRINTS PR00143 Citrate synthase signature 203 231 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 Gene3D G3DSA:1.10.580.10 36 360 3.2E-118 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 3.7E-113 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 Gene3D G3DSA:1.10.230.10 229 327 3.2E-118 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 SUPERFAMILY SSF48256 14 380 1.7E-124 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BJD94_04540 e525fa87fe0bcb48945421bdc75cbb99 380 PIRSF PIRSF001369 10 380 5.0E-116 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type BJD94_03690 df4dfb0337d68ff1838970d921394ae9 103 Pfam PF01527 Transposase 4 78 3.2E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD94_03690 df4dfb0337d68ff1838970d921394ae9 103 Gene3D G3DSA:1.10.10.60 10 93 1.2E-8 T 14-10-2018 BJD94_03690 df4dfb0337d68ff1838970d921394ae9 103 SUPERFAMILY SSF46689 5 96 4.66E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 SUPERFAMILY SSF51161 90 323 4.57E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 5.2E-179 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Gene3D G3DSA:2.160.10.10 172 343 5.0E-70 T 14-10-2018 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.7E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Gene3D G3DSA:3.30.60.70 131 171 1.9E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.133 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 BJD94_14720 f9619f3d6fd80e73c6fefb66c1fc6df8 343 Gene3D G3DSA:3.30.70.2010 1 130 3.2E-38 T 14-10-2018 BJD94_09650 499200c27f4205ee506394dc1192c0d0 69 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-32 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BJD94_09650 499200c27f4205ee506394dc1192c0d0 69 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 8.8E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 BJD94_09650 499200c27f4205ee506394dc1192c0d0 69 Gene3D G3DSA:3.30.1910.10 2 65 1.2E-19 T 14-10-2018 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 7.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 7.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 Gene3D G3DSA:1.10.10.60 157 269 2.2E-30 T 14-10-2018 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 212 257 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 SUPERFAMILY SSF46689 215 265 1.22E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 Pfam PF12833 Helix-turn-helix domain 185 262 1.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_20910 a86df25bfc55c2794b496fb7885071b5 270 SMART SM00342 179 261 1.7E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_14540 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_14540 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_14540 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_14540 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family BJD94_14540 a44293c316947c8f72f08d68aea26327 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.0E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD94_14540 a44293c316947c8f72f08d68aea26327 488 Pfam PF13629 Pilus formation protein N terminal region 26 95 7.9E-19 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal BJD94_01510 8897104c3eef937e19337f9e6ed112f9 218 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 1 216 41.845 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BJD94_01510 8897104c3eef937e19337f9e6ed112f9 218 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 198 3.1E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_01510 8897104c3eef937e19337f9e6ed112f9 218 TIGRFAM TIGR02796 tolQ: protein TolQ 1 211 1.4E-91 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BJD94_07680 10a1bc6c4f900f81095bdcb519a71824 509 SUPERFAMILY SSF46894 16 113 2.01E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_07680 10a1bc6c4f900f81095bdcb519a71824 509 Gene3D G3DSA:1.10.10.10 14 117 1.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07680 10a1bc6c4f900f81095bdcb519a71824 509 SMART SM00862 34 112 1.3E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_07680 10a1bc6c4f900f81095bdcb519a71824 509 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 112 6.8E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 SUPERFAMILY SSF51905 1 312 2.02E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.6E-22 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.6E-22 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 6.6E-22 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.6E-22 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 SUPERFAMILY SSF55424 319 438 1.37E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 Gene3D G3DSA:3.50.50.60 2 336 1.7E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 7.5E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-16 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.1E-16 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.1E-16 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 4.1E-16 T 14-10-2018 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 1.0E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_07005 91b6687d36cccdac5729eb8f73ca2569 440 Gene3D G3DSA:3.50.50.60 111 436 1.7E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_07230 b03d4a597312b87d6ed8743043d67614 169 SUPERFAMILY SSF51261 18 166 1.5E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_07230 b03d4a597312b87d6ed8743043d67614 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BJD94_07230 b03d4a597312b87d6ed8743043d67614 169 Gene3D G3DSA:2.70.70.10 9 169 1.0E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_07230 b03d4a597312b87d6ed8743043d67614 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.4E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BJD94_07230 b03d4a597312b87d6ed8743043d67614 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.8E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BJD94_09630 65b59f1344cb69332b5cc1e1ce82045c 115 SUPERFAMILY SSF110857 3 114 2.49E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BJD94_09630 65b59f1344cb69332b5cc1e1ce82045c 115 Gene3D G3DSA:3.10.490.10 4 115 4.7E-40 T 14-10-2018 BJD94_09630 65b59f1344cb69332b5cc1e1ce82045c 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 5.1E-26 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF50104 126 181 1.05E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.4E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:3.30.70.940 1 122 9.1E-48 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:2.30.30.30 123 181 8.6E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.01 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF00467 KOW motif 130 162 2.3E-7 T 14-10-2018 IPR005824 KOW BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00738 6 115 3.2E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00739 127 154 7.0E-5 T 14-10-2018 IPR005824 KOW BJD94_11930 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF82679 6 116 1.44E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD94_05185 c3eb2d8d9a57b0227e8724ce7a4b058d 77 Pfam PF06667 Phage shock protein B 4 74 9.6E-32 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BJD94_05185 c3eb2d8d9a57b0227e8724ce7a4b058d 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 BJD94_16585 3bdf37c8c57eae9d91848661e12528d0 255 Gene3D G3DSA:3.40.190.10 108 211 1.0E-27 T 14-10-2018 BJD94_16585 3bdf37c8c57eae9d91848661e12528d0 255 SUPERFAMILY SSF53850 25 249 3.93E-37 T 14-10-2018 BJD94_16585 3bdf37c8c57eae9d91848661e12528d0 255 SMART SM00062 24 252 1.9E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_16585 3bdf37c8c57eae9d91848661e12528d0 255 Gene3D G3DSA:3.40.190.10 30 248 1.0E-27 T 14-10-2018 BJD94_16585 3bdf37c8c57eae9d91848661e12528d0 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 249 4.0E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_11150 7e86773070c4488000347add6c4bad2f 46 Pfam PF00468 Ribosomal protein L34 3 45 5.3E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11150 7e86773070c4488000347add6c4bad2f 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_11150 7e86773070c4488000347add6c4bad2f 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 41 4.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11150 7e86773070c4488000347add6c4bad2f 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.38 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11150 7e86773070c4488000347add6c4bad2f 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 5.6E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 3.4E-108 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 Gene3D G3DSA:1.10.1580.10 177 268 2.6E-30 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 4.0E-15 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 SUPERFAMILY SSF52540 12 186 2.49E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 PIRSF PIRSF006230 2 280 4.0E-105 T 14-10-2018 IPR016478 GTPase, MTG1 BJD94_20595 8f1321e738d30874d1c10237fbaef9cc 314 Gene3D G3DSA:3.40.50.300 6 174 3.3E-44 T 14-10-2018 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 Gene3D G3DSA:3.40.50.2300 1 120 2.6E-29 T 14-10-2018 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 SMART SM00862 147 218 1.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 2.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 SUPERFAMILY SSF52172 4 118 2.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 Pfam PF00072 Response regulator receiver domain 6 112 3.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 Gene3D G3DSA:1.10.10.10 126 220 2.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 SUPERFAMILY SSF46894 124 218 3.68E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_21555 17ce6a507c915b65f38cb3a2894610db 220 SMART SM00448 3 111 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 SUPERFAMILY SSF63562 1 78 8.89E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 Gene3D G3DSA:3.90.940.10 1 90 1.3E-29 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD94_10355 7c756b61a82b3b7b380f7fa87c23e65b 90 SMART SM01409 8 61 1.3E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD94_17585 5bf34c84b330353183b7ced5f62233c2 178 Pfam PF13508 Acetyltransferase (GNAT) domain 52 131 1.8E-9 T 14-10-2018 IPR000182 GNAT domain BJD94_17585 5bf34c84b330353183b7ced5f62233c2 178 Gene3D G3DSA:3.40.630.30 2 176 1.9E-29 T 14-10-2018 BJD94_17585 5bf34c84b330353183b7ced5f62233c2 178 SUPERFAMILY SSF55729 1 137 3.21E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SUPERFAMILY SSF81901 33 108 2.41E-5 T 14-10-2018 BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 152 186 1.5E-7 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 188 222 0.0023 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 244 262 0.74 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 267 301 1.2E-6 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 99 114 170.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Pfam PF08238 Sel1 repeat 116 150 6.5E-6 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SUPERFAMILY SSF81901 89 305 2.04E-46 T 14-10-2018 BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Gene3D G3DSA:1.25.40.10 26 154 3.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 151 186 2.3E-7 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 115 150 3.6E-8 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 266 301 3.4E-6 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 83 114 17.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 224 265 9.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 47 82 300.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 SMART SM00671 187 222 1.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_17600 e2ac430c4286eaaae4bd307b60ef0029 335 Gene3D G3DSA:1.25.40.10 170 333 1.5E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 SUPERFAMILY SSF48168 10 221 1.44E-74 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 Gene3D G3DSA:3.20.70.20 78 742 3.7E-155 T 14-10-2018 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 SUPERFAMILY SSF51998 222 739 1.8E-164 T 14-10-2018 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.2E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 Pfam PF03477 ATP cone domain 6 92 1.8E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 5.4E-114 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_05860 89e9ad850597481082f2072093ae7c08 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.1E-172 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_08800 5568af25287fd7788ddb0a72251c0efb 231 Gene3D G3DSA:3.40.50.1580 1 231 5.4E-72 T 14-10-2018 BJD94_08800 5568af25287fd7788ddb0a72251c0efb 231 Pfam PF01048 Phosphorylase superfamily 2 227 5.8E-50 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_08800 5568af25287fd7788ddb0a72251c0efb 231 SUPERFAMILY SSF53167 1 230 2.88E-75 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_08800 5568af25287fd7788ddb0a72251c0efb 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.186 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_08800 5568af25287fd7788ddb0a72251c0efb 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.7E-101 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_19390 a35c7c0478b0c93e8974e2cda1696a9b 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 3.8E-18 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD94_19390 a35c7c0478b0c93e8974e2cda1696a9b 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.4E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD94_19390 a35c7c0478b0c93e8974e2cda1696a9b 92 Gene3D G3DSA:3.30.2310.20 1 90 1.4E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_21390 029d5bdeacdf3662600aac968fc68f9c 267 Gene3D G3DSA:3.30.2010.10 55 143 2.2E-7 T 14-10-2018 BJD94_21390 029d5bdeacdf3662600aac968fc68f9c 267 Pfam PF01435 Peptidase family M48 66 250 1.5E-46 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD94_19355 7faaec877036396ff6f9098e8bdf6f41 417 SUPERFAMILY SSF52266 145 406 1.2E-20 T 14-10-2018 BJD94_19355 7faaec877036396ff6f9098e8bdf6f41 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 146 157 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 BJD94_19355 7faaec877036396ff6f9098e8bdf6f41 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 404 6.8E-18 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 BJD94_19355 7faaec877036396ff6f9098e8bdf6f41 417 Gene3D G3DSA:3.40.50.1110 132 410 7.5E-40 T 14-10-2018 IPR036514 SGNH hydrolase superfamily BJD94_05160 4a4225b8f9d77ffcce029084e53af68e 189 Gene3D G3DSA:1.10.340.30 5 189 2.0E-77 T 14-10-2018 BJD94_05160 4a4225b8f9d77ffcce029084e53af68e 189 SUPERFAMILY SSF48150 6 187 5.96E-76 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD94_05160 4a4225b8f9d77ffcce029084e53af68e 189 Pfam PF03352 Methyladenine glycosylase 10 185 8.5E-74 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BJD94_01500 3bf3b39ac9c0a6eddcb9f5a1704f1fa9 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 93 1.9E-28 T 14-10-2018 IPR011846 Cyd operon protein YbgE BJD94_01500 3bf3b39ac9c0a6eddcb9f5a1704f1fa9 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 96 8.9E-36 T 14-10-2018 IPR011846 Cyd operon protein YbgE BJD94_17570 78debda97328248d930d922d5a78edae 213 Pfam PF01292 Prokaryotic cytochrome b561 6 173 1.0E-20 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD94_17570 78debda97328248d930d922d5a78edae 213 SUPERFAMILY SSF81342 1 176 3.4E-35 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD94_17570 78debda97328248d930d922d5a78edae 213 Gene3D G3DSA:1.20.950.20 1 164 6.1E-17 T 14-10-2018 BJD94_00990 898c43aa4a4d09ae36bedd41d91cbd79 274 Pfam PF13847 Methyltransferase domain 88 224 4.5E-14 T 14-10-2018 IPR025714 Methyltransferase domain BJD94_00990 898c43aa4a4d09ae36bedd41d91cbd79 274 PIRSF PIRSF018249 1 273 9.8E-85 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 BJD94_00990 898c43aa4a4d09ae36bedd41d91cbd79 274 Gene3D G3DSA:3.40.50.150 1 273 2.1E-79 T 14-10-2018 BJD94_00990 898c43aa4a4d09ae36bedd41d91cbd79 274 SUPERFAMILY SSF53335 4 258 1.63E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF07883 Cupin domain 146 204 1.6E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:1.10.260.40 22 96 1.0E-15 T 14-10-2018 BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF51182 97 204 1.06E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF01381 Helix-turn-helix 32 84 5.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF47413 26 90 2.95E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 SMART SM00530 31 86 4.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_21135 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:2.60.120.10 97 205 6.2E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 SMART SM00840 341 402 1.7E-26 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 Gene3D G3DSA:3.40.50.620 1 305 9.0E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.257 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 SUPERFAMILY SSF47323 316 459 1.14E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 Pfam PF09190 DALR domain 341 402 7.3E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 SUPERFAMILY SSF52374 1 313 2.0E-104 T 14-10-2018 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.9E-142 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.9E-192 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BJD94_05330 c0e2e325f9fbf076b1a39f8c66d11d32 460 Gene3D G3DSA:1.20.120.640 306 460 1.8E-51 T 14-10-2018 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 SMART SM00283 365 626 4.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 SMART SM00304 296 350 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:3.30.450.20 53 266 1.1E-23 T 14-10-2018 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF02743 Cache domain 41 258 2.5E-21 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:3.30.450.20 66 171 1.1E-23 T 14-10-2018 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 SUPERFAMILY SSF58104 318 627 3.27E-76 T 14-10-2018 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF00672 HAMP domain 299 347 5.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 593 5.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 Gene3D G3DSA:1.10.287.950 296 628 3.4E-73 T 14-10-2018 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_15010 65a7b1124d66eea6b23bb480b1d41a21 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_17185 fb605e05efdcfedc5b5965fcb93c04d7 385 SUPERFAMILY SSF103473 4 375 7.46E-47 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_17185 fb605e05efdcfedc5b5965fcb93c04d7 385 Pfam PF07690 Major Facilitator Superfamily 18 343 2.5E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_17185 fb605e05efdcfedc5b5965fcb93c04d7 385 Gene3D G3DSA:1.20.1720.10 7 371 7.8E-73 T 14-10-2018 BJD94_17185 fb605e05efdcfedc5b5965fcb93c04d7 385 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 369 3.7E-62 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 Pfam PF00588 SpoU rRNA Methylase family 5 153 7.7E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 Gene3D G3DSA:1.10.8.590 173 242 1.9E-28 T 14-10-2018 BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 PIRSF PIRSF004808 1 242 5.5E-74 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 SUPERFAMILY SSF75217 5 176 2.09E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 Gene3D G3DSA:3.40.1280.10 1 166 2.5E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_08245 deeffa317f0833bcbcac7d2a776d6d53 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 9.3E-83 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BJD94_20225 e6976410345c79957dddf97bdbf5ed31 261 Pfam PF01636 Phosphotransferase enzyme family 106 162 1.7E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BJD94_20225 e6976410345c79957dddf97bdbf5ed31 261 SUPERFAMILY SSF56112 19 207 8.13E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_20225 e6976410345c79957dddf97bdbf5ed31 261 Gene3D G3DSA:3.90.1200.10 72 245 3.5E-13 T 14-10-2018 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 SMART SM00862 154 230 2.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 Gene3D G3DSA:3.40.50.2300 2 123 7.6E-30 T 14-10-2018 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.6E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 Pfam PF00072 Response regulator receiver domain 6 114 3.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 SUPERFAMILY SSF52172 4 123 2.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 SMART SM00448 4 114 9.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 Gene3D G3DSA:1.10.10.10 137 234 4.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16375 742986e614ced77518f4cd69eb4430e9 234 SUPERFAMILY SSF46894 140 231 9.74E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 Pfam PF04055 Radical SAM superfamily 109 280 7.9E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 PIRSF PIRSF006004 3 366 3.5E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 SUPERFAMILY SSF102114 105 332 1.7E-12 T 14-10-2018 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 4.8E-161 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 Gene3D G3DSA:1.10.150.530 1 67 2.1E-26 T 14-10-2018 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 Gene3D G3DSA:3.20.20.70 68 338 7.0E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08190 70fa81fded61e8e7eb98eadae26130c5 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.315 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-168 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:1.10.150.300 120 200 2.0E-151 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF52540 3 301 1.14E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.40.50.300 4 278 2.0E-151 T 14-10-2018 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 PIRSF PIRSF006641 1 363 1.2E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 SUPERFAMILY SSF81271 279 360 1.24E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Gene3D G3DSA:3.10.20.30 48 362 2.0E-151 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.169 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BJD94_07490 6e72595684e0a7cc7c62c67566fab663 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.0E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 4.0E-6 T 14-10-2018 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 Pfam PF04055 Radical SAM superfamily 25 196 2.0E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 SUPERFAMILY SSF102114 24 372 1.31E-36 T 14-10-2018 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.5E-17 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 408 1.5E-146 T 14-10-2018 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 Gene3D G3DSA:3.20.20.70 15 411 7.4E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_21025 5596a6e3dbfbf1c4c8a7c7a5d9e0fad4 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.4E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD94_09110 2b9660142a134cfc1df44473030e53a6 160 Gene3D G3DSA:3.30.70.560 1 153 6.1E-34 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_09110 2b9660142a134cfc1df44473030e53a6 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 1.2E-29 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_09110 2b9660142a134cfc1df44473030e53a6 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 4.8E-25 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_09110 2b9660142a134cfc1df44473030e53a6 160 SUPERFAMILY SSF55083 1 149 1.83E-38 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_02135 e33d37c661b704d6c3b7590315fc2701 235 SUPERFAMILY SSF53850 16 230 2.61E-29 T 14-10-2018 BJD94_02135 e33d37c661b704d6c3b7590315fc2701 235 Gene3D G3DSA:3.40.190.10 33 227 1.3E-16 T 14-10-2018 BJD94_02135 e33d37c661b704d6c3b7590315fc2701 235 Gene3D G3DSA:3.40.190.10 96 193 1.3E-16 T 14-10-2018 BJD94_02135 e33d37c661b704d6c3b7590315fc2701 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 229 1.4E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_09430 14503fa0e8f7ac38782ff75854f86f5b 255 Pfam PF06738 Putative threonine/serine exporter 10 247 1.2E-67 T 14-10-2018 IPR010619 Putative threonine/serine exporter BJD94_12305 9af8e5282b6afec09a3ca09f466e8c53 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 6.8E-88 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BJD94_12305 9af8e5282b6afec09a3ca09f466e8c53 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 2.4E-61 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BJD94_12305 9af8e5282b6afec09a3ca09f466e8c53 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.986 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BJD94_16225 e50e4918fd4366de4ae9eee52d369415 446 Gene3D G3DSA:3.50.50.60 7 179 7.9E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_16225 e50e4918fd4366de4ae9eee52d369415 446 SUPERFAMILY SSF51905 2 190 3.84E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_16225 e50e4918fd4366de4ae9eee52d369415 446 Pfam PF12831 FAD dependent oxidoreductase 11 442 1.1E-79 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 Pfam PF13353 4Fe-4S single cluster domain 8 110 3.0E-9 T 14-10-2018 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 314 9.8E-101 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 Pfam PF04055 Radical SAM superfamily 4 166 2.5E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 SMART SM00729 1 204 5.8E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 Pfam PF06463 Molybdenum Cofactor Synthesis C 171 297 3.4E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 SUPERFAMILY SSF102114 1 266 1.7E-66 T 14-10-2018 BJD94_06100 dd9095086cc4de70321ea016f9b684dc 314 Gene3D G3DSA:3.20.20.70 1 314 5.3E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 Gene3D G3DSA:1.20.120.530 156 297 2.2E-10 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 SUPERFAMILY SSF46785 8 70 1.06E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 Pfam PF07729 FCD domain 179 285 4.0E-6 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 SUPERFAMILY SSF48008 160 292 3.92E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 Gene3D G3DSA:1.10.10.10 1 71 4.6E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 1.4E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_17475 7c6f6410b0f643fc626a57ba0a5a3094 317 SMART SM00895 162 286 5.6E-8 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_19150 d8228791429e50cfa595f77a1d62fc33 249 Pfam PF01569 PAP2 superfamily 84 227 3.2E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_19150 d8228791429e50cfa595f77a1d62fc33 249 SUPERFAMILY SSF48317 17 233 3.27E-21 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD94_19150 d8228791429e50cfa595f77a1d62fc33 249 SMART SM00014 80 230 7.4E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD94_19150 d8228791429e50cfa595f77a1d62fc33 249 Gene3D G3DSA:1.20.144.10 9 242 1.2E-46 T 14-10-2018 BJD94_01080 431312cce890d4d87f83b823b31e4252 129 Gene3D G3DSA:2.60.40.3230 18 128 6.8E-27 T 14-10-2018 IPR038483 YcfL-like superfamily BJD94_01080 431312cce890d4d87f83b823b31e4252 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.6E-28 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 BJD94_09680 fa662d20229f6e236076c4df3988ccea 165 Pfam PF11736 Protein of unknown function (DUF3299) 31 161 7.0E-44 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 BJD94_09680 fa662d20229f6e236076c4df3988ccea 165 Gene3D G3DSA:2.40.50.870 24 165 2.9E-46 T 14-10-2018 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 Gene3D G3DSA:3.40.190.290 132 278 2.3E-5 T 14-10-2018 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 Pfam PF03466 LysR substrate binding domain 92 276 2.4E-8 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 SUPERFAMILY SSF46785 1 82 5.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 SUPERFAMILY SSF53850 90 277 5.25E-14 T 14-10-2018 BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 Gene3D G3DSA:1.10.10.10 1 84 9.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18095 c7f0004ad5c53012d8d843ac5da9208f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 443 816 3.7E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1189 22.823 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Gene3D G3DSA:3.40.50.300 10 437 1.3E-160 T 14-10-2018 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Gene3D G3DSA:3.90.320.10 897 1194 2.4E-99 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 SUPERFAMILY SSF52540 16 848 3.87E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 437 6.8E-60 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 964 1162 2.6E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 SUPERFAMILY SSF52980 909 1190 6.97E-84 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Gene3D G3DSA:3.40.50.300 446 852 3.8E-158 T 14-10-2018 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Gene3D G3DSA:1.10.3170.10 158 350 1.3E-160 T 14-10-2018 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1188 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BJD94_14750 4ec15facf44f61b5865e91314215aed2 1206 Gene3D G3DSA:1.10.486.10 587 735 3.8E-158 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 SUPERFAMILY SSF69349 450 601 1.49E-38 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 Gene3D G3DSA:3.30.1920.30 230 293 7.2E-64 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 Gene3D G3DSA:3.55.50.10 109 199 7.2E-64 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 333 9.1E-72 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 SUPERFAMILY SSF69255 372 460 3.14E-33 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 SUPERFAMILY SSF69279 209 367 2.38E-10 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 513 5.7E-105 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 531 7.1E-178 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 Gene3D G3DSA:2.30.110.50 15 331 7.2E-64 T 14-10-2018 BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 Gene3D G3DSA:2.40.50.230 363 465 1.5E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BJD94_15110 60618b8dcab0ebdda7885385ce3ddb88 611 SUPERFAMILY SSF69279 13 195 7.94E-41 T 14-10-2018 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 SUPERFAMILY SSF46689 191 242 8.97E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 Gene3D G3DSA:1.10.10.60 190 241 3.2E-10 T 14-10-2018 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 SUPERFAMILY SSF46689 244 294 1.21E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 SMART SM00342 208 291 4.4E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 Gene3D G3DSA:1.10.10.60 242 294 3.3E-16 T 14-10-2018 BJD94_19215 b2eb69beb7b29871237a773bc3880443 295 Pfam PF12833 Helix-turn-helix domain 215 291 6.6E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 1.4E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 SUPERFAMILY SSF53850 24 341 6.27E-90 T 14-10-2018 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PIRSF PIRSF019574 2 344 9.4E-111 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.0E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 Gene3D G3DSA:3.40.190.10 27 308 2.2E-108 T 14-10-2018 BJD94_19240 7849e9b9df73729a6dda2726ed6528a6 344 Gene3D G3DSA:3.40.190.10 130 338 2.2E-108 T 14-10-2018 BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 Pfam PF00931 NB-ARC domain 197 339 4.0E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 Gene3D G3DSA:2.40.50.140 832 905 9.2E-7 T 14-10-2018 BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 SUPERFAMILY SSF48452 560 735 9.62E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 SUPERFAMILY SSF52540 181 445 1.13E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 Gene3D G3DSA:1.25.40.10 470 767 6.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17415 ae2d294c40d111b1ba945bda66356e73 905 Gene3D G3DSA:3.40.50.300 174 344 2.6E-19 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Gene3D G3DSA:3.30.230.10 541 767 7.9E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 SUPERFAMILY SSF52540 30 538 2.13E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Pfam PF13654 AAA domain 25 539 1.0E-184 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Gene3D G3DSA:1.10.8.60 450 536 1.3E-12 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 SUPERFAMILY SSF54211 564 756 2.24E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 751 1.2E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Gene3D G3DSA:3.40.50.300 5 193 1.4E-28 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 Gene3D G3DSA:3.40.50.300 237 449 1.4E-55 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 14-10-2018 BJD94_16420 4014e09f47ebfb443ba3a21e43755b60 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 14-10-2018 BJD94_14130 7041e1d0481d298b9a5df5f3d5dbf5ca 409 SUPERFAMILY SSF111352 12 383 4.58E-105 T 14-10-2018 BJD94_14130 7041e1d0481d298b9a5df5f3d5dbf5ca 409 Gene3D G3DSA:1.10.3430.10 2 408 2.9E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter BJD94_14130 7041e1d0481d298b9a5df5f3d5dbf5ca 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BJD94_14130 7041e1d0481d298b9a5df5f3d5dbf5ca 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 1.2E-204 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype BJD94_14130 7041e1d0481d298b9a5df5f3d5dbf5ca 409 Pfam PF00909 Ammonium Transporter Family 18 402 3.7E-101 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BJD94_06745 962330e641ced652519d57b1c1a63a8d 123 SUPERFAMILY SSF54637 15 110 1.12E-16 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_06745 962330e641ced652519d57b1c1a63a8d 123 Gene3D G3DSA:3.10.129.10 3 122 7.0E-34 T 14-10-2018 BJD94_06745 962330e641ced652519d57b1c1a63a8d 123 PIRSF PIRSF030962 1 123 4.6E-64 T 14-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_02680 3885629ba9a91dd46f946fac355aa4da 147 SUPERFAMILY SSF55811 13 139 3.93E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_02680 3885629ba9a91dd46f946fac355aa4da 147 Gene3D G3DSA:3.90.79.10 4 129 1.8E-11 T 14-10-2018 BJD94_02680 3885629ba9a91dd46f946fac355aa4da 147 Pfam PF00293 NUDIX domain 19 87 5.3E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_11460 c4247f865572a82b29201b301a395295 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 4.7E-106 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BJD94_11460 c4247f865572a82b29201b301a395295 458 PIRSF PIRSF002746 9 458 4.7E-145 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BJD94_11460 c4247f865572a82b29201b301a395295 458 Pfam PF02447 GntP family permease 13 457 6.0E-118 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BJD94_10845 d7ee7ac029f83e3fa6f6295ff7edf455 647 Gene3D G3DSA:3.20.20.540 214 527 1.0E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD94_10845 d7ee7ac029f83e3fa6f6295ff7edf455 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 100.178 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD94_10845 d7ee7ac029f83e3fa6f6295ff7edf455 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 4.0E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD94_10845 d7ee7ac029f83e3fa6f6295ff7edf455 647 Pfam PF13667 ThiC-associated domain 22 104 3.1E-33 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD94_10845 d7ee7ac029f83e3fa6f6295ff7edf455 647 Pfam PF01964 Radical SAM ThiC family 144 592 9.3E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD94_09740 f982166ecb1d816ae490a286a8e6680e 206 SUPERFAMILY SSF54534 7 205 5.89E-54 T 14-10-2018 BJD94_09740 f982166ecb1d816ae490a286a8e6680e 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.7E-22 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD94_09740 f982166ecb1d816ae490a286a8e6680e 206 Gene3D G3DSA:1.10.287.460 4 67 1.4E-17 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BJD94_09740 f982166ecb1d816ae490a286a8e6680e 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 4.5E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_09740 f982166ecb1d816ae490a286a8e6680e 206 Gene3D G3DSA:3.10.50.40 68 206 4.9E-49 T 14-10-2018 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 2 142 4.5E-31 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PIRSF PIRSF000102 1 318 6.8E-89 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 311 6.2E-21 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 SUPERFAMILY SSF56327 144 309 1.59E-40 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 SUPERFAMILY SSF51735 3 145 8.79E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 Gene3D G3DSA:3.90.110.10 146 315 6.0E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 Gene3D G3DSA:3.40.50.720 1 145 3.7E-39 T 14-10-2018 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 1.2E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 1.2E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.2E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.2E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_19235 9f483636c55c1f086a8e4c8427466eea 318 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.2E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD94_18665 ce1c89f0a1b117e0563400efc1e32e37 324 Pfam PF13407 Periplasmic binding protein domain 27 296 8.6E-57 T 14-10-2018 IPR025997 Periplasmic binding protein BJD94_18665 ce1c89f0a1b117e0563400efc1e32e37 324 SUPERFAMILY SSF53822 23 323 1.56E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_18665 ce1c89f0a1b117e0563400efc1e32e37 324 Gene3D G3DSA:3.40.50.2300 27 299 3.7E-111 T 14-10-2018 BJD94_18665 ce1c89f0a1b117e0563400efc1e32e37 324 Gene3D G3DSA:3.40.50.2300 132 276 3.7E-111 T 14-10-2018 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Gene3D G3DSA:1.10.520.10 28 432 2.3E-218 T 14-10-2018 BJD94_04635 8c4772a0a505c9137551586003467ace 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Gene3D G3DSA:1.10.520.10 433 723 6.3E-148 T 14-10-2018 BJD94_04635 8c4772a0a505c9137551586003467ace 723 SUPERFAMILY SSF48113 19 431 1.12E-152 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.4E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.4E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.4E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.4E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.4E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Pfam PF00141 Peroxidase 405 698 9.6E-38 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Pfam PF00141 Peroxidase 71 398 1.3E-52 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 40.025 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD94_04635 8c4772a0a505c9137551586003467ace 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Gene3D G3DSA:1.10.420.20 191 397 2.3E-218 T 14-10-2018 BJD94_04635 8c4772a0a505c9137551586003467ace 723 Gene3D G3DSA:1.10.420.10 578 699 6.3E-148 T 14-10-2018 BJD94_04635 8c4772a0a505c9137551586003467ace 723 SUPERFAMILY SSF48113 432 722 1.16E-112 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD94_20740 174e6254ea4ecf772df39a73e488cbfb 151 Pfam PF00293 NUDIX domain 10 126 9.5E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_20740 174e6254ea4ecf772df39a73e488cbfb 151 Gene3D G3DSA:3.90.79.10 5 137 7.7E-24 T 14-10-2018 BJD94_20740 174e6254ea4ecf772df39a73e488cbfb 151 SUPERFAMILY SSF55811 7 136 1.49E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 SUPERFAMILY SSF52540 336 582 1.38E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 SMART SM00382 371 557 2.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 Gene3D G3DSA:1.20.1560.10 11 333 1.7E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 SUPERFAMILY SSF90123 15 326 7.06E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 1.5E-287 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 Gene3D G3DSA:3.40.50.300 336 585 6.0E-94 T 14-10-2018 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 Pfam PF00005 ABC transporter 363 511 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_21105 ee3dfc69afe1deec8ca5ef65c3593ac0 586 Pfam PF00664 ABC transporter transmembrane region 29 291 3.8E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 SUPERFAMILY SSF69189 282 374 5.49E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 SUPERFAMILY SSF56601 11 282 3.59E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 Gene3D G3DSA:2.60.410.10 282 372 8.0E-28 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 262 1.4E-83 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 Gene3D G3DSA:3.40.710.10 17 280 3.5E-88 T 14-10-2018 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 SMART SM00936 282 372 5.0E-30 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_20255 381d205a6c259fe9cec24d46f89c9db1 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 4.3E-23 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 Gene3D G3DSA:1.20.1560.10 1 323 2.0E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 SMART SM00382 361 546 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 SUPERFAMILY SSF90123 2 321 7.98E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 Pfam PF00005 ABC transporter 352 500 3.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 Pfam PF00664 ABC transporter transmembrane region 21 287 5.5E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 Gene3D G3DSA:3.40.50.300 327 587 8.4E-82 T 14-10-2018 BJD94_02175 5edb5f4e0536e23b6fb55c9ab7b9727d 589 SUPERFAMILY SSF52540 330 570 7.07E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_16185 3b41466e03dd5b74711f07cc412977ac 98 SUPERFAMILY SSF82771 10 79 1.09E-11 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD94_16185 3b41466e03dd5b74711f07cc412977ac 98 Pfam PF01541 GIY-YIG catalytic domain 10 79 6.5E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease BJD94_16185 3b41466e03dd5b74711f07cc412977ac 98 Gene3D G3DSA:3.40.1440.10 6 96 4.0E-25 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD94_09570 ce348b04b91c61f7f27312027bdd7287 77 Gene3D G3DSA:3.30.1340.10 1 71 4.3E-23 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_09570 ce348b04b91c61f7f27312027bdd7287 77 Pfam PF00381 PTS HPr component phosphorylation site 1 70 3.7E-20 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_09570 ce348b04b91c61f7f27312027bdd7287 77 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 70 1.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_09570 ce348b04b91c61f7f27312027bdd7287 77 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 27 42 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BJD94_09570 ce348b04b91c61f7f27312027bdd7287 77 SUPERFAMILY SSF55594 1 76 1.18E-21 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 238 3.9E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Pfam PF04539 Sigma-70 region 3 102 172 1.2E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 SUPERFAMILY SSF88659 93 159 7.41E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 239 8.8E-85 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 241 63.865 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Pfam PF04542 Sigma-70 region 2 20 92 4.8E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 SUPERFAMILY SSF88659 162 240 7.48E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Gene3D G3DSA:1.10.1740.10 5 89 2.2E-28 T 14-10-2018 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Gene3D G3DSA:1.20.140.160 91 240 1.3E-43 T 14-10-2018 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 PIRSF PIRSF000770 2 244 3.9E-38 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 SUPERFAMILY SSF88946 7 92 2.75E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 PRINTS PR00046 Major sigma-70 factor signature 191 203 2.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 PRINTS PR00046 Major sigma-70 factor signature 223 234 2.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 PRINTS PR00046 Major sigma-70 factor signature 208 223 2.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 PRINTS PR00046 Major sigma-70 factor signature 47 60 2.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD94_00675 5fc0c24c7764030446e526bba7ff4078 245 Pfam PF04545 Sigma-70, region 4 188 235 2.5E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD94_13690 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:1.10.1520.10 3 149 5.7E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BJD94_13690 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF54768 108 222 4.24E-28 T 14-10-2018 BJD94_13690 b888679212586fdca086b174896e19fc 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.378 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BJD94_13690 b888679212586fdca086b174896e19fc 225 SMART SM00358 155 223 8.9E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain BJD94_13690 b888679212586fdca086b174896e19fc 225 Pfam PF14622 Ribonuclease-III-like 18 142 2.4E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD94_13690 b888679212586fdca086b174896e19fc 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 3.0E-75 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BJD94_13690 b888679212586fdca086b174896e19fc 225 SMART SM00535 20 148 4.4E-57 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD94_13690 b888679212586fdca086b174896e19fc 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 4.0E-15 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain BJD94_13690 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:3.30.160.20 153 224 1.9E-19 T 14-10-2018 BJD94_13690 b888679212586fdca086b174896e19fc 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD94_13690 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF69065 4 158 1.1E-50 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BJD94_10310 a63d6360863c602d169a7ea99e7dafc3 341 Gene3D G3DSA:1.10.3720.10 103 332 3.4E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10310 a63d6360863c602d169a7ea99e7dafc3 341 SUPERFAMILY SSF161098 108 321 1.83E-15 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10310 a63d6360863c602d169a7ea99e7dafc3 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 8.1E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 SUPERFAMILY SSF90123 7 323 1.14E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 Pfam PF00005 ABC transporter 356 502 5.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 533 2.5E-137 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 Gene3D G3DSA:1.20.1560.10 2 321 2.3E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 Pfam PF00664 ABC transporter transmembrane region 24 286 9.1E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 SUPERFAMILY SSF52540 335 571 2.11E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 Gene3D G3DSA:3.40.50.300 327 572 1.1E-75 T 14-10-2018 BJD94_04905 5ec1d85ba540893416f4a6f6d077243c 573 SMART SM00382 365 549 8.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_13100 a19e67979d1667eaf0057ffc88f058e5 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 9.9E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13100 a19e67979d1667eaf0057ffc88f058e5 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13100 a19e67979d1667eaf0057ffc88f058e5 192 Gene3D G3DSA:3.30.700.10 8 192 4.3E-9 T 14-10-2018 BJD94_13100 a19e67979d1667eaf0057ffc88f058e5 192 SUPERFAMILY SSF54523 8 104 1.65E-12 T 14-10-2018 BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 SUPERFAMILY SSF53901 7 235 1.18E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 89 236 6.5E-21 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 SMART SM00825 Beta-ketoacyl synthase 9 338 3.4E-7 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 344 1.0E-26 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 Gene3D G3DSA:3.40.47.10 2 242 6.0E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 SUPERFAMILY SSF53901 210 391 2.74E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD94_06780 15a2f37ad77faf4e5251e30a6343a715 395 Gene3D G3DSA:3.40.47.10 246 389 5.4E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 SUPERFAMILY SSF53738 203 309 2.51E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Gene3D G3DSA:3.30.310.50 449 551 2.9E-8 T 14-10-2018 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 3.1E-17 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Gene3D G3DSA:3.40.120.10 323 443 8.1E-31 T 14-10-2018 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Gene3D G3DSA:3.40.120.10 204 322 8.6E-21 T 14-10-2018 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 537 3.0E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 SUPERFAMILY SSF55957 434 541 2.75E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 SUPERFAMILY SSF53738 301 445 2.51E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 9.9E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 312 3.8E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 SUPERFAMILY SSF53738 30 222 4.71E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_15770 31bf56cc05d15061bd6c416d2e43c83b 569 Gene3D G3DSA:3.40.120.10 32 184 8.2E-48 T 14-10-2018 BJD94_01295 562017d87cbdb1b45e20511b22b7b881 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 BJD94_01295 562017d87cbdb1b45e20511b22b7b881 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD94_01295 562017d87cbdb1b45e20511b22b7b881 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD94_01295 562017d87cbdb1b45e20511b22b7b881 741 Gene3D G3DSA:3.40.718.10 408 651 7.0E-11 T 14-10-2018 BJD94_01295 562017d87cbdb1b45e20511b22b7b881 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD94_03210 38e9112b053e7a65b41c77b1049346f5 91 Pfam PF03992 Antibiotic biosynthesis monooxygenase 27 70 1.7E-6 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BJD94_03210 38e9112b053e7a65b41c77b1049346f5 91 SUPERFAMILY SSF54909 4 82 6.56E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_03210 38e9112b053e7a65b41c77b1049346f5 91 Gene3D G3DSA:3.30.70.100 1 87 1.1E-10 T 14-10-2018 BJD94_19880 c75fe0b769accc1439632835cf119826 367 Pfam PF01553 Acyltransferase 92 240 8.1E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_19880 c75fe0b769accc1439632835cf119826 367 SUPERFAMILY SSF69593 61 245 2.35E-8 T 14-10-2018 BJD94_04890 e08397bf707e141b24a002aa8b87c399 218 Gene3D G3DSA:2.60.120.620 1 215 1.4E-52 T 14-10-2018 BJD94_04890 e08397bf707e141b24a002aa8b87c399 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 1.3E-53 T 14-10-2018 IPR018724 2OG-Fe dioxygenase BJD94_17115 200478c276f21959cd10e16c09da3d8e 407 Pfam PF07690 Major Facilitator Superfamily 20 246 6.7E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_17115 200478c276f21959cd10e16c09da3d8e 407 Pfam PF07690 Major Facilitator Superfamily 252 401 8.4E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_17115 200478c276f21959cd10e16c09da3d8e 407 SUPERFAMILY SSF103473 16 403 1.18E-35 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_17115 200478c276f21959cd10e16c09da3d8e 407 Gene3D G3DSA:1.20.1250.20 5 399 5.7E-26 T 14-10-2018 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 9.6E-49 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 179.785 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 SUPERFAMILY SSF52440 2 122 3.45E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Gene3D G3DSA:3.30.470.20 197 300 2.5E-40 T 14-10-2018 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Gene3D G3DSA:3.30.1490.20 137 196 2.2E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 9.6E-141 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 5.0E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 SUPERFAMILY SSF56059 123 313 1.55E-58 T 14-10-2018 BJD94_13510 4979eaa7b70742786e5828f4918098b4 317 Gene3D G3DSA:3.40.50.20 1 129 1.5E-52 T 14-10-2018 BJD94_05925 835b53f2188c6fea6e31e5c37a980339 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 3.8E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BJD94_05925 835b53f2188c6fea6e31e5c37a980339 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD94_05925 835b53f2188c6fea6e31e5c37a980339 185 PIRSF PIRSF000847 1 184 6.2E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BJD94_05925 835b53f2188c6fea6e31e5c37a980339 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.0E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD94_05925 835b53f2188c6fea6e31e5c37a980339 185 Gene3D G3DSA:1.20.120.1760 2 181 4.7E-17 T 14-10-2018 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.095 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 Gene3D G3DSA:3.40.50.150 7 234 2.2E-57 T 14-10-2018 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 SUPERFAMILY SSF53335 34 195 1.06E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 6.6E-6 T 14-10-2018 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 6.6E-6 T 14-10-2018 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 6.6E-6 T 14-10-2018 BJD94_08675 2bc7ed793b8203236e4b5ad55bbb931f 239 Pfam PF05175 Methyltransferase small domain 42 135 1.1E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD94_05845 677ce62799e40030db9588596274b451 903 SUPERFAMILY SSF101904 532 875 5.49E-106 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 8.3E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.36 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.3E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 1.6E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 7.4E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Gene3D G3DSA:2.120.10.90 534 865 6.0E-124 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD94_05845 677ce62799e40030db9588596274b451 903 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.6E-158 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_05845 677ce62799e40030db9588596274b451 903 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 709 0.0 T 14-10-2018 BJD94_05845 677ce62799e40030db9588596274b451 903 SMART SM00434 11 498 5.0E-302 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD94_05845 677ce62799e40030db9588596274b451 903 Gene3D G3DSA:1.10.268.10 369 492 3.8E-236 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_05845 677ce62799e40030db9588596274b451 903 SUPERFAMILY SSF56719 30 520 6.15E-188 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD94_05845 677ce62799e40030db9588596274b451 903 Gene3D G3DSA:3.30.1360.40 236 332 3.8E-236 T 14-10-2018 BJD94_05845 677ce62799e40030db9588596274b451 903 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.68 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD94_05845 677ce62799e40030db9588596274b451 903 Gene3D G3DSA:3.90.199.10 33 520 3.8E-236 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.996 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 SUPERFAMILY SSF53067 134 305 3.7E-43 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 Gene3D G3DSA:3.30.420.150 114 291 5.3E-84 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.1E-87 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 Gene3D G3DSA:3.30.420.40 11 298 5.3E-84 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 SUPERFAMILY SSF53067 9 129 5.83E-37 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 Gene3D G3DSA:1.10.3210.10 306 498 2.3E-47 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 SUPERFAMILY SSF109604 309 496 1.48E-40 T 14-10-2018 BJD94_10740 9eb11c64dceb9fed8c2b632e35967faf 498 PIRSF PIRSF001267 1 497 1.2E-179 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BJD94_02155 74f727ddf1569be28bb8a7d5dc6e9ed0 379 Gene3D G3DSA:1.10.3210.10 159 373 7.5E-49 T 14-10-2018 BJD94_02155 74f727ddf1569be28bb8a7d5dc6e9ed0 379 SUPERFAMILY SSF109604 185 358 2.14E-23 T 14-10-2018 BJD94_02155 74f727ddf1569be28bb8a7d5dc6e9ed0 379 Pfam PF13487 HD domain 240 309 7.3E-13 T 14-10-2018 BJD94_02155 74f727ddf1569be28bb8a7d5dc6e9ed0 379 SUPERFAMILY SSF55781 35 151 4.36E-10 T 14-10-2018 BJD94_02155 74f727ddf1569be28bb8a7d5dc6e9ed0 379 Gene3D G3DSA:3.30.450.40 9 157 2.7E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_17520 efbedcd9036d947f86062915986df95e 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 5.9E-193 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BJD94_17520 efbedcd9036d947f86062915986df95e 435 PIRSF PIRSF009264 1 430 1.1E-204 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BJD94_17520 efbedcd9036d947f86062915986df95e 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 9.3E-211 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 BJD94_17520 efbedcd9036d947f86062915986df95e 435 Gene3D G3DSA:3.20.20.70 8 416 1.7E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_17520 efbedcd9036d947f86062915986df95e 435 SUPERFAMILY SSF51569 4 424 2.56E-163 T 14-10-2018 BJD94_17520 efbedcd9036d947f86062915986df95e 435 Gene3D G3DSA:1.10.400.20 288 411 1.7E-169 T 14-10-2018 BJD94_15130 59ec2f417fa791cdffd6e5e23a9438c4 608 Pfam PF05947 Type VI secretion system, TssF 6 607 1.7E-177 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like BJD94_15130 59ec2f417fa791cdffd6e5e23a9438c4 608 PIRSF PIRSF028304 1 607 9.6E-149 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like BJD94_15130 59ec2f417fa791cdffd6e5e23a9438c4 608 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 608 3.6E-197 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like BJD94_20165 24bba797b0d5eceb088585b1a99b6b71 384 SUPERFAMILY SSF53383 3 379 5.06E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20165 24bba797b0d5eceb088585b1a99b6b71 384 Gene3D G3DSA:3.40.640.10 60 273 5.8E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20165 24bba797b0d5eceb088585b1a99b6b71 384 Pfam PF00155 Aminotransferase class I and II 31 375 9.3E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_20165 24bba797b0d5eceb088585b1a99b6b71 384 Gene3D G3DSA:3.90.1150.10 15 377 5.8E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_01010 0068201911d970d0f7b93878f9676b00 354 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 195 347 1.3E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_01010 0068201911d970d0f7b93878f9676b00 354 SUPERFAMILY SSF55073 204 347 3.92E-34 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01010 0068201911d970d0f7b93878f9676b00 354 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 343 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain BJD94_01010 0068201911d970d0f7b93878f9676b00 354 SMART SM00267 188 348 2.7E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_01010 0068201911d970d0f7b93878f9676b00 354 Gene3D G3DSA:3.30.70.270 186 349 4.8E-41 T 14-10-2018 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.153 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Pfam PF01225 Mur ligase family, catalytic domain 27 81 7.1E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Pfam PF08245 Mur ligase middle domain 105 293 6.0E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 SUPERFAMILY SSF63418 1 95 6.93E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Gene3D G3DSA:3.40.1390.10 1 80 2.0E-25 T 14-10-2018 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Gene3D G3DSA:3.40.1190.10 81 311 3.3E-75 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 395 1.4E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 Gene3D G3DSA:3.90.190.20 313 453 3.5E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 7.2E-143 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 SUPERFAMILY SSF53623 100 311 5.23E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD94_08910 8f9249274e8b9d58ebe462773eb4dd40 453 SUPERFAMILY SSF53244 314 448 9.77E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 SUPERFAMILY SSF53223 4 267 1.01E-109 T 14-10-2018 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 SUPERFAMILY SSF51735 268 559 6.94E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 7.7E-103 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 144 173 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 180 202 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 295 311 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 239 257 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 84 108 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 264 280 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PRINTS PR00072 Malic enzyme signature 405 421 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.395 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 SMART SM00919 268 528 3.1E-131 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 SMART SM01274 78 258 1.3E-107 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 PIRSF PIRSF000106 2 560 8.5E-225 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 Gene3D G3DSA:3.40.50.10380 13 265 1.9E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD94_04860 633d4e14affa0247559c7801fa1f0ed8 562 Gene3D G3DSA:3.40.50.720 266 562 3.9E-109 T 14-10-2018 BJD94_10825 eb50d2322908ea333f129aa7a469589b 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 6.5E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BJD94_10825 eb50d2322908ea333f129aa7a469589b 257 SUPERFAMILY SSF110399 1 236 5.75E-86 T 14-10-2018 BJD94_10825 eb50d2322908ea333f129aa7a469589b 257 Gene3D G3DSA:3.20.20.70 1 253 5.5E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10825 eb50d2322908ea333f129aa7a469589b 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.001 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BJD94_12765 8a072ca9b274d64c43acaf4a3fdb22bd 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 2.6E-34 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 BJD94_08030 470fb7c7df13c62c0525c3bccaf5e6f8 119 Pfam PF04355 SmpA / OmlA family 35 102 5.1E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BJD94_08030 470fb7c7df13c62c0525c3bccaf5e6f8 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.455 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE BJD94_08030 470fb7c7df13c62c0525c3bccaf5e6f8 119 Gene3D G3DSA:3.30.1450.10 34 115 3.1E-25 T 14-10-2018 IPR037873 BamE-like BJD94_12995 02ee48a43fadfc9db8c6d64d4829a7bb 376 Pfam PF10442 FIST C domain 218 354 8.8E-30 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_12995 02ee48a43fadfc9db8c6d64d4829a7bb 376 SMART SM01204 218 355 1.2E-44 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_12995 02ee48a43fadfc9db8c6d64d4829a7bb 376 SMART SM00897 24 217 1.1E-44 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_12995 02ee48a43fadfc9db8c6d64d4829a7bb 376 Pfam PF08495 FIST N domain 28 215 9.5E-33 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_12785 9fa43b7a7b5234da1680d8eb867d64e0 196 Pfam PF05137 Fimbrial assembly protein (PilN) 102 177 8.6E-15 T 14-10-2018 IPR007813 Fimbrial assembly PilN BJD94_03025 e9d3a9176c47155642317d69cae5aa53 346 SUPERFAMILY SSF81301 7 197 2.29E-33 T 14-10-2018 BJD94_03025 e9d3a9176c47155642317d69cae5aa53 346 SMART SM00954 43 169 6.9E-18 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_03025 e9d3a9176c47155642317d69cae5aa53 346 Pfam PF04607 Region found in RelA / SpoT proteins 43 165 4.6E-23 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_03025 e9d3a9176c47155642317d69cae5aa53 346 Gene3D G3DSA:3.30.460.10 2 150 4.3E-24 T 14-10-2018 BJD94_03025 e9d3a9176c47155642317d69cae5aa53 346 Gene3D G3DSA:1.10.287.860 152 203 3.7E-7 T 14-10-2018 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 5.4E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.1E-40 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.786 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.6E-142 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 PIRSF PIRSF003095 1 432 1.1E-127 T 14-10-2018 IPR005215 Trigger factor GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.30.70.1050 1 115 8.3E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF109998 248 429 3.53E-49 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:1.10.3120.10 116 417 1.9E-107 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF54534 90 241 8.84E-37 T 14-10-2018 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.10.50.40 150 246 1.9E-107 T 14-10-2018 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.2E-43 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BJD94_06620 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF102735 1 131 4.05E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 Pfam PF00119 ATP synthase A chain 44 262 5.9E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 SUPERFAMILY SSF81336 93 262 1.44E-49 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 2.6E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 Gene3D G3DSA:1.20.120.220 92 268 2.0E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11100 a3a04a1257f441e3f14f7c50bb29c63e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.216 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_10155 68b9e721f91d63acd283020b89fb6965 294 Pfam PF00483 Nucleotidyl transferase 2 240 4.0E-73 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_10155 68b9e721f91d63acd283020b89fb6965 294 Gene3D G3DSA:3.90.550.10 1 294 1.0E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10155 68b9e721f91d63acd283020b89fb6965 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 2.0E-151 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BJD94_10155 68b9e721f91d63acd283020b89fb6965 294 SUPERFAMILY SSF53448 1 289 7.15E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 Pfam PF00005 ABC transporter 25 166 2.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 6.5E-106 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 Gene3D G3DSA:3.40.50.300 3 277 5.8E-62 T 14-10-2018 BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 SUPERFAMILY SSF52540 6 226 1.95E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 SMART SM00382 34 216 1.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14955 5644eedceae9b9ea01c82bd9c393a144 280 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 Pfam PF04055 Radical SAM superfamily 371 576 4.0E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 Pfam PF08497 Radical SAM N-terminal 24 370 3.9E-143 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 SMART SM00729 367 617 9.8E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 Gene3D G3DSA:3.80.30.20 366 624 3.9E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 Pfam PF11842 Domain of unknown function (DUF3362) 585 728 1.6E-42 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.12 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 2.4E-262 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 BJD94_01740 7f26200ff825af0204d4b88ce9e237fa 768 SUPERFAMILY SSF102114 370 605 2.22E-11 T 14-10-2018 BJD94_10650 cacc0146569a17876daf66488ef649d6 275 Pfam PF08668 HDOD domain 13 203 1.6E-52 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_10650 cacc0146569a17876daf66488ef649d6 275 Gene3D G3DSA:1.10.3210.10 1 270 1.8E-64 T 14-10-2018 BJD94_10650 cacc0146569a17876daf66488ef649d6 275 SUPERFAMILY SSF109604 5 254 2.32E-56 T 14-10-2018 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Gene3D G3DSA:3.10.20.310 341 415 1.2E-7 T 14-10-2018 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Pfam PF01103 Surface antigen 453 745 3.5E-5 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 SUPERFAMILY SSF52151 29 318 5.75E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Gene3D G3DSA:3.40.1090.10 139 280 4.1E-19 T 14-10-2018 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Gene3D G3DSA:3.40.1090.10 17 123 1.1E-27 T 14-10-2018 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Pfam PF01734 Patatin-like phospholipase 35 225 3.6E-29 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BJD94_14095 c13bf4044b75fd16a7bc5a0429572013 762 Pfam PF07244 Surface antigen variable number repeat 345 415 3.1E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_17830 b488b64cc462b6b014a6081920099660 404 SUPERFAMILY SSF53335 117 402 8.86E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 384 1.6E-43 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BJD94_17830 b488b64cc462b6b014a6081920099660 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD94_17830 b488b64cc462b6b014a6081920099660 404 Gene3D G3DSA:3.40.50.150 126 401 8.1E-75 T 14-10-2018 BJD94_01250 c07b82f1e2155c8ca1b5ec4a63cf99e8 929 SMART SM01276 475 799 8.6E-46 T 14-10-2018 IPR031161 Peptidase family M60 domain BJD94_01250 c07b82f1e2155c8ca1b5ec4a63cf99e8 929 Pfam PF17291 N-terminal domain of M60-like peptidases 472 559 5.4E-6 T 14-10-2018 IPR035423 M60-like domain, N-terminal BJD94_16625 e8ed03b8e7b8a2c2ea818ae353399557 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 345 9.2E-132 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_16625 e8ed03b8e7b8a2c2ea818ae353399557 356 Pfam PF00793 DAHP synthetase I family 44 337 5.1E-84 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_16625 e8ed03b8e7b8a2c2ea818ae353399557 356 Gene3D G3DSA:3.20.20.70 8 347 6.8E-135 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_16625 e8ed03b8e7b8a2c2ea818ae353399557 356 SUPERFAMILY SSF51569 12 346 3.98E-115 T 14-10-2018 BJD94_16625 e8ed03b8e7b8a2c2ea818ae353399557 356 PIRSF PIRSF001361 4 351 3.5E-147 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_04040 a16d4a783f9454d05125e1ffb125357e 399 SMART SM00897 28 227 2.5E-35 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_04040 a16d4a783f9454d05125e1ffb125357e 399 SMART SM01204 228 375 4.7E-28 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_04040 a16d4a783f9454d05125e1ffb125357e 399 Pfam PF08495 FIST N domain 32 226 5.3E-23 T 14-10-2018 IPR013702 FIST domain, N-terminal BJD94_04040 a16d4a783f9454d05125e1ffb125357e 399 Pfam PF10442 FIST C domain 229 374 4.5E-15 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 Gene3D G3DSA:3.10.310.70 116 245 1.8E-134 T 14-10-2018 BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 SUPERFAMILY SSF51556 97 538 7.78E-26 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 Gene3D G3DSA:3.20.20.140 98 537 1.8E-134 T 14-10-2018 BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 Gene3D G3DSA:2.30.40.10 44 555 1.8E-134 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 Pfam PF07969 Amidohydrolase family 86 578 5.5E-122 T 14-10-2018 IPR013108 Amidohydrolase 3 BJD94_06380 61b6770c232e109aa6ed61fadee188a3 583 SUPERFAMILY SSF51338 36 578 1.89E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 PIRSF PIRSF001359 13 358 1.4E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 SUPERFAMILY SSF51569 4 356 1.16E-128 T 14-10-2018 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 Gene3D G3DSA:3.20.20.70 2 358 1.3E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.2E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.5E-88 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13565 4a7c6c2397cd730e92db9d1f6617cad4 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.9E-174 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 SUPERFAMILY SSF69593 397 570 1.14E-30 T 14-10-2018 BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 Pfam PF01553 Acyltransferase 442 567 2.6E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 Gene3D G3DSA:1.20.1250.20 10 422 2.9E-25 T 14-10-2018 BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 SMART SM00563 456 570 5.8E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 SUPERFAMILY SSF103473 13 423 1.05E-25 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_06525 be23f59d8a8db9f5d499e89130e976f7 624 Pfam PF07690 Major Facilitator Superfamily 19 385 3.6E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_13185 d8209db57ed148834765bdeb120ab89f 250 SUPERFAMILY SSF55120 7 221 1.34E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13185 d8209db57ed148834765bdeb120ab89f 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 1.2E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13185 d8209db57ed148834765bdeb120ab89f 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_13185 d8209db57ed148834765bdeb120ab89f 250 Gene3D G3DSA:3.30.2350.10 4 221 3.2E-68 T 14-10-2018 BJD94_21370 f75fec413cee07395ce5a0ef66ab7721 185 SUPERFAMILY SSF82057 117 184 2.56E-20 T 14-10-2018 BJD94_21370 f75fec413cee07395ce5a0ef66ab7721 185 Pfam PF03831 PhnA domain 119 184 1.4E-22 T 14-10-2018 IPR013988 PhnA protein, C-terminal BJD94_21370 f75fec413cee07395ce5a0ef66ab7721 185 SMART SM00782 6 52 3.1E-27 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial BJD94_21370 f75fec413cee07395ce5a0ef66ab7721 185 Gene3D G3DSA:2.30.30.40 114 185 3.3E-24 T 14-10-2018 BJD94_21370 f75fec413cee07395ce5a0ef66ab7721 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 3.0E-10 T 14-10-2018 IPR013987 PhnA protein, N-terminal BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.166 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 Gene3D G3DSA:3.50.30.80 421 573 5.2E-56 T 14-10-2018 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.7E-266 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 SUPERFAMILY SSF143975 3 420 7.06E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 SUPERFAMILY SSF52016 421 608 1.33E-61 T 14-10-2018 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11030 7a2ed4cd7e2c1b62209973b94b1959b0 613 Pfam PF00920 Dehydratase family 34 604 4.1E-220 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 Pfam PF00813 FliP family 92 283 2.3E-79 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_00640 ef8b1f2945bbf829d5f5e49f714bc22f 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 3.4E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD94_10625 7b20d190e9f9fc4e91c905762614d5ae 544 SUPERFAMILY SSF56112 94 436 1.45E-45 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_10625 7b20d190e9f9fc4e91c905762614d5ae 544 Pfam PF03109 ABC1 family 112 231 9.2E-36 T 14-10-2018 IPR004147 UbiB domain BJD94_10625 7b20d190e9f9fc4e91c905762614d5ae 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.024 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BJD94_10625 7b20d190e9f9fc4e91c905762614d5ae 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.4E-175 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BJD94_12615 296911a542d8594d3417f249a43a4767 62 Gene3D G3DSA:1.10.10.1100 1 57 1.2E-19 T 14-10-2018 BJD94_12615 296911a542d8594d3417f249a43a4767 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.1E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD94_15560 7a7ab0413d55091366f1812b37667516 179 Gene3D G3DSA:3.10.640.10 1 177 1.0E-62 T 14-10-2018 IPR038590 YaeQ superfamily BJD94_15560 7a7ab0413d55091366f1812b37667516 179 SUPERFAMILY SSF52980 2 178 2.49E-61 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_15560 7a7ab0413d55091366f1812b37667516 179 PIRSF PIRSF011484 1 179 4.6E-61 T 14-10-2018 IPR009822 YaeQ BJD94_15560 7a7ab0413d55091366f1812b37667516 179 SMART SM01322 1 174 2.6E-94 T 14-10-2018 IPR009822 YaeQ BJD94_15560 7a7ab0413d55091366f1812b37667516 179 Pfam PF07152 YaeQ protein 1 170 3.2E-64 T 14-10-2018 IPR009822 YaeQ BJD94_18780 df30197deeed683f7537bea96e191ae3 405 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 Gene3D G3DSA:2.60.120.10 317 398 6.6E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18780 df30197deeed683f7537bea96e191ae3 405 Pfam PF01238 Phosphomannose isomerase type I 17 366 4.6E-87 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 Gene3D G3DSA:1.10.441.10 164 316 6.6E-132 T 14-10-2018 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 16 397 7.0E-96 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 Gene3D G3DSA:2.60.120.10 21 291 6.6E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PIRSF PIRSF001480 14 405 5.4E-103 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 47 62 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 140 163 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 95 116 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 19 37 1.6E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_18780 df30197deeed683f7537bea96e191ae3 405 SUPERFAMILY SSF51182 15 393 2.37E-105 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_18780 df30197deeed683f7537bea96e191ae3 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 140 148 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BJD94_11940 07057f53562158199b2f979bd8aa4612 233 PIRSF PIRSF002155 1 227 1.1E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_11940 07057f53562158199b2f979bd8aa4612 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.331 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BJD94_11940 07057f53562158199b2f979bd8aa4612 233 Gene3D G3DSA:3.40.50.790 68 159 1.7E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BJD94_11940 07057f53562158199b2f979bd8aa4612 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_11940 07057f53562158199b2f979bd8aa4612 233 SUPERFAMILY SSF56808 6 225 6.28E-83 T 14-10-2018 IPR023674 Ribosomal protein L1-like BJD94_11940 07057f53562158199b2f979bd8aa4612 233 Gene3D G3DSA:3.30.190.20 21 225 1.7E-81 T 14-10-2018 BJD94_11940 07057f53562158199b2f979bd8aa4612 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BJD94_11940 07057f53562158199b2f979bd8aa4612 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.2E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BJD94_19030 15ffb92f5fc66a24a757449368dc432a 302 SUPERFAMILY SSF103481 42 138 1.16E-11 T 14-10-2018 BJD94_19030 15ffb92f5fc66a24a757449368dc432a 302 SUPERFAMILY SSF103481 185 287 7.32E-14 T 14-10-2018 BJD94_19030 15ffb92f5fc66a24a757449368dc432a 302 Pfam PF00892 EamA-like transporter family 8 135 9.3E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_19030 15ffb92f5fc66a24a757449368dc432a 302 Pfam PF00892 EamA-like transporter family 150 283 6.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_03595 11bb440b127f5bc0779dd2dd62f192ba 200 Gene3D G3DSA:3.40.50.150 31 199 1.4E-24 T 14-10-2018 BJD94_03595 11bb440b127f5bc0779dd2dd62f192ba 200 Pfam PF13649 Methyltransferase domain 41 131 7.2E-12 T 14-10-2018 BJD94_03595 11bb440b127f5bc0779dd2dd62f192ba 200 SUPERFAMILY SSF53335 3 192 8.95E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_02345 b8b1e8ac37e2e247e12b6a68ba992465 358 SUPERFAMILY SSF52540 126 355 9.57E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02345 b8b1e8ac37e2e247e12b6a68ba992465 358 SUPERFAMILY SSF52172 20 119 2.16E-5 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_02345 b8b1e8ac37e2e247e12b6a68ba992465 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 127 179 6.7E-7 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BJD94_02345 b8b1e8ac37e2e247e12b6a68ba992465 358 Gene3D G3DSA:3.40.50.300 125 357 1.0E-30 T 14-10-2018 BJD94_02345 b8b1e8ac37e2e247e12b6a68ba992465 358 Gene3D G3DSA:3.40.50.2300 1 116 2.9E-18 T 14-10-2018 BJD94_09045 b2c97e29e7f4b92768eae548510738f3 211 Pfam PF00293 NUDIX domain 59 175 2.3E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_09045 b2c97e29e7f4b92768eae548510738f3 211 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 1.2E-60 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 BJD94_09045 b2c97e29e7f4b92768eae548510738f3 211 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_09045 b2c97e29e7f4b92768eae548510738f3 211 Gene3D G3DSA:3.90.79.10 1 208 5.3E-62 T 14-10-2018 BJD94_09045 b2c97e29e7f4b92768eae548510738f3 211 SUPERFAMILY SSF55811 11 206 3.01E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 SMART SM00525 181 201 1.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 1 262 1.5E-122 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Pfam PF14815 NUDIX domain 224 334 3.6E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 SUPERFAMILY SSF48150 1 215 2.83E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 SMART SM00478 29 180 1.3E-44 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 182 198 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Gene3D G3DSA:3.90.79.10 212 339 1.0E-13 T 14-10-2018 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 182 198 6.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 SUPERFAMILY SSF55811 210 334 1.35E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 26 158 2.5E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Gene3D G3DSA:1.10.1670.10 1 201 5.2E-86 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BJD94_13440 48c91990096feffb848b1c26cb8c4a25 342 Gene3D G3DSA:1.10.340.30 11 122 5.2E-86 T 14-10-2018 BJD94_00220 c4879ab5e9643893471ca5cea3000cef 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 6.5E-57 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BJD94_00220 c4879ab5e9643893471ca5cea3000cef 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 1.0E-62 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BJD94_00220 c4879ab5e9643893471ca5cea3000cef 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.2 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 BJD94_06520 d520325b53ebf624f02335d23379b6c4 196 Gene3D G3DSA:1.10.357.10 1 192 2.6E-41 T 14-10-2018 BJD94_06520 d520325b53ebf624f02335d23379b6c4 196 SUPERFAMILY SSF46689 2 71 2.09E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_06520 d520325b53ebf624f02335d23379b6c4 196 SUPERFAMILY SSF48498 87 193 3.18E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_06520 d520325b53ebf624f02335d23379b6c4 196 Pfam PF13305 WHG domain 93 172 7.4E-13 T 14-10-2018 IPR025996 WHG domain BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 SUPERFAMILY SSF55073 371 508 2.12E-31 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 Gene3D G3DSA:3.30.70.270 354 511 1.2E-33 T 14-10-2018 BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 507 6.2E-28 T 14-10-2018 IPR000160 GGDEF domain BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 508 1.2E-23 T 14-10-2018 IPR000160 GGDEF domain BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 SMART SM00267 356 511 1.3E-29 T 14-10-2018 IPR000160 GGDEF domain BJD94_14485 802b4d702b2de4c0f8a2af35a064af2d 511 Pfam PF07695 7TM diverse intracellular signalling 151 343 1.5E-17 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BJD94_02245 01f64318e90ec5a68f55e6c9aeb23f9f 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_02245 01f64318e90ec5a68f55e6c9aeb23f9f 163 SUPERFAMILY SSF54523 7 99 2.35E-11 T 14-10-2018 BJD94_02245 01f64318e90ec5a68f55e6c9aeb23f9f 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_02245 01f64318e90ec5a68f55e6c9aeb23f9f 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_02245 01f64318e90ec5a68f55e6c9aeb23f9f 163 Gene3D G3DSA:3.30.700.10 7 87 2.8E-10 T 14-10-2018 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 Gene3D G3DSA:3.60.21.10 22 360 1.8E-136 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 554 1.6E-18 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 249 272 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 28 46 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 221 238 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 289 309 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 536 555 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 PRINTS PR01607 Apyrase family signature 434 457 4.1E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 SUPERFAMILY SSF56300 23 360 6.33E-87 T 14-10-2018 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 Gene3D G3DSA:3.90.780.10 410 593 3.5E-49 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 7.8E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_09715 e0bb7984d003bb59f507f1b1bcaec81c 653 SUPERFAMILY SSF55816 361 603 1.57E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BJD94_02060 09acd2ec9be305fe48be8eae3224977e 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 5.7E-49 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_02060 09acd2ec9be305fe48be8eae3224977e 472 PIRSF PIRSF002457 1 472 9.5E-116 T 14-10-2018 IPR030676 Citrate carrier CitT-related BJD94_02060 09acd2ec9be305fe48be8eae3224977e 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 5.3E-77 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 4.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 4.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 4.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 4.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 SUPERFAMILY SSF53067 223 456 5.66E-22 T 14-10-2018 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 SUPERFAMILY SSF53067 5 209 2.27E-31 T 14-10-2018 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 Pfam PF00012 Hsp70 protein 84 315 3.9E-18 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02270 b7263f49a693a65c0496b3b55a4cf1ad 935 Pfam PF12531 DNA-K related protein 685 932 1.3E-100 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 BJD94_16540 b33ef39ed247f513142054c17cc1fee5 168 Pfam PF04170 NlpE N-terminal domain 74 158 9.7E-33 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE BJD94_16540 b33ef39ed247f513142054c17cc1fee5 168 Gene3D G3DSA:2.40.128.640 61 168 4.6E-43 T 14-10-2018 BJD94_02380 9b0818a6bcaa72b88fcb4e5ea258adb8 465 Pfam PF00092 von Willebrand factor type A domain 129 180 4.8E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_02380 9b0818a6bcaa72b88fcb4e5ea258adb8 465 Gene3D G3DSA:3.40.50.410 299 462 3.9E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_02380 9b0818a6bcaa72b88fcb4e5ea258adb8 465 SUPERFAMILY SSF53300 118 459 3.66E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_02380 9b0818a6bcaa72b88fcb4e5ea258adb8 465 Gene3D G3DSA:3.40.50.410 121 204 9.5E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_02380 9b0818a6bcaa72b88fcb4e5ea258adb8 465 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 6 49 4.3E-7 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal BJD94_16100 05d94b2791c67eed60a4fcddcafff831 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 313 2.2E-15 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_16100 05d94b2791c67eed60a4fcddcafff831 563 Gene3D G3DSA:3.40.190.10 125 371 5.2E-31 T 14-10-2018 BJD94_16100 05d94b2791c67eed60a4fcddcafff831 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 7 116 6.4E-17 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BJD94_16100 05d94b2791c67eed60a4fcddcafff831 563 SUPERFAMILY SSF53850 122 553 1.45E-41 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Pfam PF13604 AAA domain 238 399 1.2E-31 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Pfam PF13538 UvrD-like helicase C-terminal domain 631 677 1.0E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 SUPERFAMILY SSF52540 16 443 1.17E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 SUPERFAMILY SSF52540 363 700 5.49E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Gene3D G3DSA:1.10.10.1020 10 125 1.0E-22 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Gene3D G3DSA:3.40.50.300 569 691 5.8E-27 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Gene3D G3DSA:3.40.50.300 448 568 4.8E-23 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Gene3D G3DSA:3.40.50.300 203 438 1.3E-74 T 14-10-2018 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 23 700 49.44 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BJD94_14755 d9a41cd9fb90b1c6ede88759779eea42 704 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 702 6.9E-212 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BJD94_20295 2b9d5766f643bf8b87d44bf63760e757 280 SUPERFAMILY SSF161098 89 272 7.06E-39 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20295 2b9d5766f643bf8b87d44bf63760e757 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 5.0E-124 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein BJD94_20295 2b9d5766f643bf8b87d44bf63760e757 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 5.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_20295 2b9d5766f643bf8b87d44bf63760e757 280 Gene3D G3DSA:1.10.3720.10 84 274 2.3E-34 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19120 7bfd202ac292cf2ca068e65fc4a82621 646 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 311 471 1.1E-7 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BJD94_19120 7bfd202ac292cf2ca068e65fc4a82621 646 SUPERFAMILY SSF53383 74 607 3.53E-56 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 Gene3D G3DSA:3.40.50.300 1 226 5.4E-65 T 14-10-2018 BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.3E-105 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 SMART SM00382 33 221 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 SUPERFAMILY SSF52540 4 224 5.32E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01130 ccde0fb6d1b03fe427743d483df20520 227 Pfam PF00005 ABC transporter 24 172 5.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_16525 5114c27ddba8b4503ba28953e5caeec8 682 Gene3D G3DSA:3.20.20.450 429 679 2.2E-67 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_16525 5114c27ddba8b4503ba28953e5caeec8 682 Pfam PF00563 EAL domain 439 663 1.3E-55 T 14-10-2018 IPR001633 EAL domain BJD94_16525 5114c27ddba8b4503ba28953e5caeec8 682 SMART SM00052 426 668 5.1E-60 T 14-10-2018 IPR001633 EAL domain BJD94_16525 5114c27ddba8b4503ba28953e5caeec8 682 SUPERFAMILY SSF141868 436 675 4.84E-66 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_16525 5114c27ddba8b4503ba28953e5caeec8 682 Pfam PF02378 Phosphotransferase system, EIIC 25 322 1.6E-16 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 4.0E-42 T 14-10-2018 IPR000160 GGDEF domain BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 SMART SM00052 502 747 9.6E-100 T 14-10-2018 IPR001633 EAL domain BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 SUPERFAMILY SSF141868 507 754 1.24E-82 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 SUPERFAMILY SSF55073 341 489 9.42E-41 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 Pfam PF00563 EAL domain 508 742 2.1E-68 T 14-10-2018 IPR001633 EAL domain BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 Gene3D G3DSA:3.30.450.20 27 182 4.9E-7 T 14-10-2018 BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 Gene3D G3DSA:3.30.70.270 330 504 2.9E-50 T 14-10-2018 BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 488 3.3E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 Gene3D G3DSA:3.20.20.450 505 758 1.1E-87 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_15680 6ffc540f3e53c8aceb35fe2b9b64cf81 758 SMART SM00267 325 492 8.8E-53 T 14-10-2018 IPR000160 GGDEF domain BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:1.10.10.10 1 74 2.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF55252 82 151 2.62E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 2.2E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 3.4E-43 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.387 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:3.30.1360.40 75 156 2.4E-35 T 14-10-2018 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.3E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 129 2.0E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BJD94_09460 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF46785 4 77 1.5E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 Gene3D G3DSA:3.40.1180.10 1 239 7.3E-96 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 SUPERFAMILY SSF64005 9 234 2.88E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 5.9E-93 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 4.6E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD94_00255 d52c3a6aa60c9c70d1784deafa0770dc 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.488 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.948 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.9E-63 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 SUPERFAMILY SSF53098 3 156 5.06E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.2E-75 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 BJD94_01470 4dba129ebf218a24366efe92ad0e6cac 173 Gene3D G3DSA:3.30.420.10 2 159 2.7E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_11525 7167153e63edb3fb878f9d0511252abc 175 Gene3D G3DSA:1.20.1260.10 1 175 6.9E-52 T 14-10-2018 IPR012347 Ferritin-like BJD94_11525 7167153e63edb3fb878f9d0511252abc 175 Pfam PF00210 Ferritin-like domain 8 143 7.3E-38 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD94_11525 7167153e63edb3fb878f9d0511252abc 175 SUPERFAMILY SSF47240 1 160 2.32E-57 T 14-10-2018 IPR009078 Ferritin-like superfamily BJD94_12180 4c8ffa7df40fae36ece7de506053f3cf 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 412 3.9E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_12180 4c8ffa7df40fae36ece7de506053f3cf 448 Pfam PF01554 MatE 245 406 1.1E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_12180 4c8ffa7df40fae36ece7de506053f3cf 448 Pfam PF01554 MatE 22 181 2.5E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_12180 4c8ffa7df40fae36ece7de506053f3cf 448 PIRSF PIRSF006603 1 446 6.6E-131 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.358 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 SUPERFAMILY SSF51735 1 122 4.73E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.5E-40 T 14-10-2018 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.5E-40 T 14-10-2018 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.5E-40 T 14-10-2018 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.5E-40 T 14-10-2018 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.3E-146 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 SMART SM00881 4 100 5.3E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 Pfam PF00549 CoA-ligase 151 270 1.8E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 Gene3D G3DSA:3.40.50.720 2 123 6.9E-52 T 14-10-2018 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 Pfam PF02629 CoA binding domain 6 99 1.2E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 PIRSF PIRSF001553 1 289 1.4E-136 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 SUPERFAMILY SSF52210 123 286 2.88E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 Gene3D G3DSA:3.40.50.261 124 288 1.2E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD94_06950 1628e8f718a8a01e14984a31b73e2a06 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BJD94_11250 03d16742015653395c11d69a70c507a2 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 SUPERFAMILY SSF53901 262 386 9.41E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_11250 03d16742015653395c11d69a70c507a2 387 PIRSF PIRSF000429 1 387 2.3E-135 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 4.4E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 6.0E-50 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 2.0E-244 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BJD94_11250 03d16742015653395c11d69a70c507a2 387 Gene3D G3DSA:3.40.47.10 134 381 3.1E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_11250 03d16742015653395c11d69a70c507a2 387 Gene3D G3DSA:3.40.47.10 4 267 3.1E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_11250 03d16742015653395c11d69a70c507a2 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 4.5E-143 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_11250 03d16742015653395c11d69a70c507a2 387 SUPERFAMILY SSF53901 1 258 1.38E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_11250 03d16742015653395c11d69a70c507a2 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.806 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BJD94_03755 00a19241c840e22b0107dcb54cc0dec5 67 PIRSF PIRSF037225 1 65 7.4E-28 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 BJD94_03755 00a19241c840e22b0107dcb54cc0dec5 67 Pfam PF14255 Cysteine-rich CPXCG 10 59 5.3E-20 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein BJD94_08595 87ce9016a28958e5730c1863dead12f5 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.0E-83 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD94_08595 87ce9016a28958e5730c1863dead12f5 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 1.7E-91 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD94_08595 87ce9016a28958e5730c1863dead12f5 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD94_08595 87ce9016a28958e5730c1863dead12f5 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.18 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 SMART SM00729 23 247 2.6E-44 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 Pfam PF16199 Radical_SAM C-terminal domain 209 280 5.1E-18 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 1.4E-134 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 SUPERFAMILY SSF102114 13 268 6.93E-50 T 14-10-2018 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 Pfam PF04055 Radical SAM superfamily 43 201 3.2E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_08770 aec8582d5c1b2ef0116bdfad610bfc70 318 Gene3D G3DSA:3.80.30.20 41 278 2.2E-17 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_11730 fa1af02b0aadf24d1a5bb4a1ecd22211 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.7E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BJD94_06175 4e07e0b60a5e35722bd510ccbcd48a04 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.7E-72 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 BJD94_06175 4e07e0b60a5e35722bd510ccbcd48a04 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 6.0E-72 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 BJD94_13940 14c410f450a3d3271719369b03b59178 182 Pfam PF01782 RimM N-terminal domain 15 95 2.7E-24 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 BJD94_13940 14c410f450a3d3271719369b03b59178 182 Gene3D G3DSA:2.40.30.60 4 100 1.5E-32 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BJD94_13940 14c410f450a3d3271719369b03b59178 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.08 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BJD94_13940 14c410f450a3d3271719369b03b59178 182 SUPERFAMILY SSF50447 12 100 1.59E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD94_13940 14c410f450a3d3271719369b03b59178 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.1E-55 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BJD94_13940 14c410f450a3d3271719369b03b59178 182 Gene3D G3DSA:2.30.30.240 101 182 3.0E-31 T 14-10-2018 BJD94_13940 14c410f450a3d3271719369b03b59178 182 Pfam PF05239 PRC-barrel domain 103 168 5.8E-12 T 14-10-2018 IPR027275 PRC-barrel domain BJD94_13940 14c410f450a3d3271719369b03b59178 182 SUPERFAMILY SSF50346 106 182 2.35E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily BJD94_08205 5017ee312314c6bf12eaf22320a284f6 64 SUPERFAMILY SSF140319 1 63 4.05E-27 T 14-10-2018 IPR036762 IscX-like superfamily BJD94_08205 5017ee312314c6bf12eaf22320a284f6 64 Gene3D G3DSA:1.10.10.600 1 64 7.8E-28 T 14-10-2018 IPR036762 IscX-like superfamily BJD94_08205 5017ee312314c6bf12eaf22320a284f6 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.6E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BJD94_08205 5017ee312314c6bf12eaf22320a284f6 64 PIRSF PIRSF039003 1 64 5.4E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BJD94_08205 5017ee312314c6bf12eaf22320a284f6 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 1.3E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 BJD94_16645 c79c3b74c245f8470c88ddd15ce86dc1 271 Gene3D G3DSA:3.40.50.80 131 270 9.2E-40 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_16645 c79c3b74c245f8470c88ddd15ce86dc1 271 Pfam PF04954 Siderophore-interacting protein 134 253 2.3E-34 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain BJD94_16645 c79c3b74c245f8470c88ddd15ce86dc1 271 SUPERFAMILY SSF63380 14 128 8.04E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_16645 c79c3b74c245f8470c88ddd15ce86dc1 271 Gene3D G3DSA:2.40.30.10 4 127 1.2E-29 T 14-10-2018 BJD94_16645 c79c3b74c245f8470c88ddd15ce86dc1 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 127 4.9E-32 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Gene3D G3DSA:1.20.140.10 241 385 1.1E-48 T 14-10-2018 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Gene3D G3DSA:1.10.540.10 2 127 2.7E-45 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 4.4E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Gene3D G3DSA:2.40.110.10 128 240 1.3E-42 T 14-10-2018 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 SUPERFAMILY SSF56645 6 249 3.27E-81 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 3.1E-44 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 125 1.7E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 SUPERFAMILY SSF47203 234 387 2.9E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 PIRSF PIRSF016578 137 389 3.6E-13 T 14-10-2018 BJD94_15440 fe92e1f1cefb1ad6bffa3b5d081101db 389 PIRSF PIRSF016578 15 103 2.9E-4 T 14-10-2018 BJD94_13885 c5a1593da0516996cb26baa21f901a5f 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.4E-157 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 BJD94_13885 c5a1593da0516996cb26baa21f901a5f 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 9.2E-170 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 BJD94_13885 c5a1593da0516996cb26baa21f901a5f 376 PIRSF PIRSF015658 1 376 6.7E-177 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 BJD94_03295 62d8b30dcdee2c158fff505713364e15 147 Gene3D G3DSA:3.90.79.10 4 130 1.7E-11 T 14-10-2018 BJD94_03295 62d8b30dcdee2c158fff505713364e15 147 Pfam PF00293 NUDIX domain 19 87 5.3E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_03295 62d8b30dcdee2c158fff505713364e15 147 SUPERFAMILY SSF55811 13 140 3.11E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 9.7E-178 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 SUPERFAMILY SSF51395 434 1191 6.92E-248 T 14-10-2018 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Gene3D G3DSA:3.20.20.70 484 1173 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 SUPERFAMILY SSF69336 1213 1465 1.07E-87 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 4.8E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Pfam PF01493 GXGXG motif 1236 1419 3.4E-73 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.7E-100 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 Gene3D G3DSA:2.160.20.60 1200 1468 7.9E-101 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD94_08785 63d32d73ab2325c5697c3e7f79808a97 1487 SUPERFAMILY SSF56235 13 429 2.46E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_14680 1143b1db3a99dc8f85312d45b5ee91cc 400 Pfam PF05940 NnrS protein 22 394 6.8E-106 T 14-10-2018 IPR010266 NnrS BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 Gene3D G3DSA:3.30.360.10 130 316 1.4E-150 T 14-10-2018 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 PIRSF PIRSF000148 4 337 4.2E-132 T 14-10-2018 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.8E-61 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 SUPERFAMILY SSF55347 131 320 2.98E-77 T 14-10-2018 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.4E-127 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 SUPERFAMILY SSF51735 5 159 5.15E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 SMART SM00859 6 121 1.5E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.435 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 Gene3D G3DSA:3.40.50.720 7 330 1.4E-150 T 14-10-2018 BJD94_00855 9222e471bb3e75c2bfe9f014ce16e469 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.8E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.6E-67 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.777 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.8E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 Gene3D G3DSA:3.40.50.10860 8 276 2.2E-106 T 14-10-2018 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 SUPERFAMILY SSF53223 1 122 1.25E-39 T 14-10-2018 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 Gene3D G3DSA:3.40.50.720 6 259 2.2E-106 T 14-10-2018 BJD94_00995 449c5fec0a72c2fc3c6e69d3f50e7551 285 SUPERFAMILY SSF51735 123 280 5.6E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10360 8f1201104950561df994445496a7d962 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_10360 8f1201104950561df994445496a7d962 706 Gene3D G3DSA:3.30.460.10 193 325 1.0E-46 T 14-10-2018 BJD94_10360 8f1201104950561df994445496a7d962 706 Gene3D G3DSA:3.30.70.260 627 706 3.1E-12 T 14-10-2018 BJD94_10360 8f1201104950561df994445496a7d962 706 SUPERFAMILY SSF81271 376 448 1.64E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD94_10360 8f1201104950561df994445496a7d962 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 701 3.1E-268 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 BJD94_10360 8f1201104950561df994445496a7d962 706 SMART SM00471 41 153 2.6E-10 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_10360 8f1201104950561df994445496a7d962 706 Gene3D G3DSA:3.10.20.30 382 456 3.0E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_10360 8f1201104950561df994445496a7d962 706 Pfam PF02824 TGS domain 389 447 3.8E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD94_10360 8f1201104950561df994445496a7d962 706 SUPERFAMILY SSF81301 180 393 1.08E-59 T 14-10-2018 BJD94_10360 8f1201104950561df994445496a7d962 706 Pfam PF13291 ACT domain 627 703 2.3E-13 T 14-10-2018 IPR002912 ACT domain BJD94_10360 8f1201104950561df994445496a7d962 706 SMART SM00954 235 345 2.7E-59 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD94_10360 8f1201104950561df994445496a7d962 706 Pfam PF13328 HD domain 28 175 4.2E-53 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_10360 8f1201104950561df994445496a7d962 706 SUPERFAMILY SSF55021 633 703 2.83E-6 T 14-10-2018 BJD94_10360 8f1201104950561df994445496a7d962 706 Gene3D G3DSA:1.10.3210.10 3 190 6.8E-79 T 14-10-2018 BJD94_10360 8f1201104950561df994445496a7d962 706 SUPERFAMILY SSF109604 3 190 4.71E-74 T 14-10-2018 BJD94_01180 a82886473a0f82418b94d3958530c953 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.178 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 BJD94_01180 a82886473a0f82418b94d3958530c953 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 8.5E-188 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00388 222 282 1.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF55874 285 429 3.67E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF47384 215 277 8.83E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 Gene3D G3DSA:3.30.565.10 284 431 8.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00387 321 431 1.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF00672 HAMP domain 169 217 1.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 Gene3D G3DSA:1.10.287.130 167 277 7.0E-24 T 14-10-2018 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SMART SM00304 169 221 1.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_10380 5b1b7fddafda17a6ca387ed18d0230e7 432 SUPERFAMILY SSF158472 171 218 2.62E-5 T 14-10-2018 BJD94_09265 afb5da4505dcb6df6cfb8d11e78f1947 895 Gene3D G3DSA:3.40.50.150 281 587 1.7E-30 T 14-10-2018 BJD94_09265 afb5da4505dcb6df6cfb8d11e78f1947 895 Pfam PF02384 N-6 DNA Methylase 347 476 6.4E-5 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BJD94_09265 afb5da4505dcb6df6cfb8d11e78f1947 895 SUPERFAMILY SSF53335 170 578 1.16E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_12635 6a68d6b2e7b35c8c36e378d7548e0643 115 Gene3D G3DSA:3.30.429.10 1 115 8.3E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily BJD94_12635 6a68d6b2e7b35c8c36e378d7548e0643 115 SUPERFAMILY SSF55331 2 115 2.0E-36 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily BJD94_12635 6a68d6b2e7b35c8c36e378d7548e0643 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.8E-6 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 BJD94_19480 3c034ccc8c254df2a349226556f3fdba 240 SMART SM01057 24 239 2.9E-89 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain BJD94_19480 3c034ccc8c254df2a349226556f3fdba 240 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 BJD94_19480 3c034ccc8c254df2a349226556f3fdba 240 Pfam PF00194 Eukaryotic-type carbonic anhydrase 23 238 9.3E-50 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain BJD94_19480 3c034ccc8c254df2a349226556f3fdba 240 Gene3D G3DSA:3.10.200.10 23 238 1.4E-80 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily BJD94_19480 3c034ccc8c254df2a349226556f3fdba 240 SUPERFAMILY SSF51069 23 237 3.09E-72 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily BJD94_15105 c05867bb0746efdaf659da86e91b0b7a 96 Gene3D G3DSA:2.60.200.60 54 95 2.4E-12 T 14-10-2018 BJD94_15105 c05867bb0746efdaf659da86e91b0b7a 96 Gene3D G3DSA:2.60.200.60 1 53 3.8E-10 T 14-10-2018 BJD94_15105 c05867bb0746efdaf659da86e91b0b7a 96 Pfam PF05488 PAAR motif 18 85 3.9E-25 T 14-10-2018 IPR008727 PAAR motif BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 Pfam PF00376 MerR family regulatory protein 4 40 5.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 SUPERFAMILY SSF46955 2 121 1.58E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 SMART SM00422 2 71 4.7E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 Gene3D G3DSA:1.10.1660.10 1 130 9.4E-36 T 14-10-2018 BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 Pfam PF09278 MerR, DNA binding 47 109 2.5E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding BJD94_12030 8e91b89bdcd97cb5a7f3b6d82afa999c 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 6.0E-66 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Pfam PF01580 FtsK/SpoIIIE family 596 809 2.3E-71 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 SUPERFAMILY SSF46785 913 978 3.81E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Gene3D G3DSA:3.40.50.300 593 895 1.2E-120 T 14-10-2018 BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 5.3E-42 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 SUPERFAMILY SSF52540 570 882 2.52E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Gene3D G3DSA:3.30.980.40 488 592 9.5E-33 T 14-10-2018 BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Gene3D G3DSA:1.10.10.10 907 974 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 SMART SM00843 913 978 2.2E-38 T 14-10-2018 IPR018541 FtsK gamma domain BJD94_05515 8b38c5c89182ae6004902eb533c5be5d 981 Pfam PF09397 Ftsk gamma domain 915 975 1.1E-25 T 14-10-2018 IPR018541 FtsK gamma domain BJD94_08540 a854f23c6bf18881c18f15b966afa959 126 Gene3D G3DSA:3.10.50.40 2 123 8.8E-41 T 14-10-2018 BJD94_08540 a854f23c6bf18881c18f15b966afa959 126 SUPERFAMILY SSF54534 2 125 1.34E-31 T 14-10-2018 BJD94_08540 a854f23c6bf18881c18f15b966afa959 126 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 2 122 3.2E-8 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_08540 a854f23c6bf18881c18f15b966afa959 126 Gene3D G3DSA:2.40.10.330 55 111 8.8E-41 T 14-10-2018 BJD94_07285 ae40b6ca47117a52b995ae09dd4eba9c 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.4E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD94_07285 ae40b6ca47117a52b995ae09dd4eba9c 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 6.7E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BJD94_07285 ae40b6ca47117a52b995ae09dd4eba9c 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.3E-32 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD94_07285 ae40b6ca47117a52b995ae09dd4eba9c 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD94_07285 ae40b6ca47117a52b995ae09dd4eba9c 249 SUPERFAMILY SSF117143 78 207 2.09E-15 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD94_07150 3126ba1c18763d06324863ba8e2ac167 116 SMART SM00938 6 104 1.0E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_07150 3126ba1c18763d06324863ba8e2ac167 116 Gene3D G3DSA:3.30.70.120 1 110 2.8E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_07150 3126ba1c18763d06324863ba8e2ac167 116 SUPERFAMILY SSF54913 1 102 9.45E-22 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.50.7.10 192 372 1.3E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF52029 185 376 4.49E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.4E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.8E-254 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.44 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 8 521 1.3E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.30.260.10 136 410 1.3E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 3 230 1.02E-67 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD94_12190 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 373 525 2.44E-31 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD94_16255 6cd8da2bb4b9a51bf18a5c214ec3dc23 229 Gene3D G3DSA:3.20.20.70 1 222 1.6E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_16255 6cd8da2bb4b9a51bf18a5c214ec3dc23 229 SUPERFAMILY SSF51366 5 222 1.29E-53 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_16255 6cd8da2bb4b9a51bf18a5c214ec3dc23 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 27 223 8.0E-67 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 BJD94_16255 6cd8da2bb4b9a51bf18a5c214ec3dc23 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 3 223 37.008 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 22 229 1.2E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.595 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.6E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.9E-182 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 SUPERFAMILY SSF55205 6 418 2.78E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BJD94_09485 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 12 414 1.2E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:3.30.300.70 1 80 9.2E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 3.2E-21 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF74942 84 151 1.57E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF02576 RimP N-terminal domain 12 83 4.8E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.907 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BJD94_14315 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF75420 2 83 4.71E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 3.9E-151 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 SUPERFAMILY SSF51726 5 393 1.15E-108 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 PIRSF PIRSF000382 2 763 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 1.1E-118 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 SUPERFAMILY SSF51726 396 757 3.14E-114 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_01770 2b236328d13185efad71ed02447a0ab4 778 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.901 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_17275 e8c867d00f42f9306f9715919a5b547e 178 Gene3D G3DSA:1.20.58.320 1 77 1.2E-25 T 14-10-2018 BJD94_17275 e8c867d00f42f9306f9715919a5b547e 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 3.5E-63 T 14-10-2018 IPR010323 Protein of unknown function DUF924 BJD94_17275 e8c867d00f42f9306f9715919a5b547e 178 Gene3D G3DSA:1.25.40.10 78 178 2.0E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17275 e8c867d00f42f9306f9715919a5b547e 178 SUPERFAMILY SSF48452 2 174 5.69E-68 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 Pfam PF00990 Diguanylate cyclase, GGDEF domain 439 592 4.9E-38 T 14-10-2018 IPR000160 GGDEF domain BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 SUPERFAMILY SSF158472 381 429 8.24E-5 T 14-10-2018 BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 SMART SM00304 381 433 0.0027 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 SUPERFAMILY SSF55073 444 594 4.79E-40 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 Gene3D G3DSA:1.20.1480.50 348 435 2.8E-7 T 14-10-2018 BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 Gene3D G3DSA:3.30.70.270 436 600 1.1E-44 T 14-10-2018 BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 594 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_17130 8b13263b6f413c9da27535e7dd9baf5d 607 SMART SM00267 428 596 3.4E-51 T 14-10-2018 IPR000160 GGDEF domain BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 Pfam PF02130 Uncharacterized protein family UPF0054 22 142 1.4E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 Gene3D G3DSA:3.40.390.30 1 154 1.9E-60 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 SUPERFAMILY SSF55486 5 149 1.1E-48 T 14-10-2018 BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.3E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD94_07585 503d8dce74a877f9d61b2b3ea5941622 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.019 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD94_08520 a341f3f065a63783243c58f84f22496e 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.6E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain BJD94_08520 a341f3f065a63783243c58f84f22496e 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.4E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BJD94_08520 a341f3f065a63783243c58f84f22496e 494 Pfam PF02554 Carbon starvation protein CstA 148 293 2.7E-20 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BJD94_02090 78a4d1d8fa0f32953f5afbc69b460a11 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 1.1E-19 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 BJD94_02090 78a4d1d8fa0f32953f5afbc69b460a11 403 Pfam PF01966 HD domain 166 287 1.9E-14 T 14-10-2018 IPR006674 HD domain BJD94_02090 78a4d1d8fa0f32953f5afbc69b460a11 403 Gene3D G3DSA:1.10.3210.10 10 327 4.1E-67 T 14-10-2018 BJD94_02090 78a4d1d8fa0f32953f5afbc69b460a11 403 SMART SM00471 161 297 1.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_02090 78a4d1d8fa0f32953f5afbc69b460a11 403 SUPERFAMILY SSF109604 156 327 1.49E-31 T 14-10-2018 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 SUPERFAMILY SSF54686 3 133 4.58E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 7.5E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.624 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09845 f458c70dc0ff8e2a21cfa6d519da71f3 136 Gene3D G3DSA:3.90.1170.10 1 136 2.1E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_18415 88f2608eb9c2136ab4cd53ef7a6f19f6 602 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 44 355 1.8E-70 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 BJD94_18415 88f2608eb9c2136ab4cd53ef7a6f19f6 602 Pfam PF02690 Na+/Pi-cotransporter 50 185 2.2E-50 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BJD94_18415 88f2608eb9c2136ab4cd53ef7a6f19f6 602 Pfam PF02690 Na+/Pi-cotransporter 203 290 4.6E-16 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BJD94_18415 88f2608eb9c2136ab4cd53ef7a6f19f6 602 SUPERFAMILY SSF109755 372 587 2.09E-13 T 14-10-2018 BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 SUPERFAMILY SSF53335 3 213 2.36E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 6.2E-72 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 PIRSF PIRSF023956 2 217 6.8E-71 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 Gene3D G3DSA:3.40.50.150 1 216 5.4E-58 T 14-10-2018 BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 213 1.9E-76 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 BJD94_02540 b85cd5c469fbda9753f556351c4d6a4f 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.146 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD94_09480 1940a4644602c706add9128601538c63 241 Pfam PF01553 Acyltransferase 58 180 3.0E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_09480 1940a4644602c706add9128601538c63 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.7E-43 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BJD94_09480 1940a4644602c706add9128601538c63 241 SUPERFAMILY SSF69593 5 235 5.49E-56 T 14-10-2018 BJD94_09480 1940a4644602c706add9128601538c63 241 SMART SM00563 67 182 4.9E-39 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 Gene3D G3DSA:3.40.50.720 141 264 4.7E-13 T 14-10-2018 BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 SUPERFAMILY SSF51735 142 269 6.3E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.1E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 Pfam PF13727 CoA-binding domain 63 240 2.9E-38 T 14-10-2018 BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 6.4E-152 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BJD94_19785 19a64007b368c1bf8ca4a4ddef59b359 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 466 3.7E-171 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 BJD94_14165 914b71cdfdeb6564e800194d804069dc 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 8.7E-46 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 BJD94_14165 914b71cdfdeb6564e800194d804069dc 296 Gene3D G3DSA:3.30.420.40 115 261 1.6E-67 T 14-10-2018 BJD94_14165 914b71cdfdeb6564e800194d804069dc 296 SUPERFAMILY SSF53067 114 283 5.18E-43 T 14-10-2018 BJD94_14165 914b71cdfdeb6564e800194d804069dc 296 SUPERFAMILY SSF53067 1 111 4.29E-24 T 14-10-2018 BJD94_14165 914b71cdfdeb6564e800194d804069dc 296 Gene3D G3DSA:3.30.420.40 5 114 1.6E-67 T 14-10-2018 BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 Gene3D G3DSA:3.10.580.10 196 348 1.9E-28 T 14-10-2018 BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 Pfam PF01595 Domain of unknown function DUF21 9 199 1.2E-40 T 14-10-2018 IPR002550 CNNM, transmembrane domain BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 SUPERFAMILY SSF56176 346 434 3.27E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 SUPERFAMILY SSF54631 201 336 1.07E-17 T 14-10-2018 BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 Gene3D G3DSA:3.30.465.10 349 429 8.1E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 Pfam PF03471 Transporter associated domain 349 427 2.1E-20 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_16775 9ea5cf42e66df71da04e3eb84390071a 437 SMART SM01091 348 428 3.1E-26 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_05735 af56a5ec7b286a77c066be53ae815faa 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.0E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_05735 af56a5ec7b286a77c066be53ae815faa 56 SUPERFAMILY SSF57829 2 55 1.16E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BJD94_05735 af56a5ec7b286a77c066be53ae815faa 56 Pfam PF01783 Ribosomal L32p protein family 2 56 2.4E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_05735 af56a5ec7b286a77c066be53ae815faa 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.755 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_19245 6383f02ef903aead36754ca4877c8528 716 Gene3D G3DSA:2.170.130.10 32 172 2.1E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_19245 6383f02ef903aead36754ca4877c8528 716 Gene3D G3DSA:2.40.170.20 175 707 3.9E-31 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_19245 6383f02ef903aead36754ca4877c8528 716 SUPERFAMILY SSF56935 42 704 1.98E-77 T 14-10-2018 BJD94_19245 6383f02ef903aead36754ca4877c8528 716 Pfam PF00593 TonB dependent receptor 261 706 1.2E-19 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_19245 6383f02ef903aead36754ca4877c8528 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 1.2E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 6.2E-40 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:3.40.50.620 315 555 2.1E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:1.10.730.10 576 818 4.9E-71 T 14-10-2018 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.1E-226 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 SUPERFAMILY SSF47323 642 898 2.8E-67 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 SUPERFAMILY SSF50677 191 365 7.85E-59 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:1.10.287.380 877 949 1.5E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 SUPERFAMILY SSF52374 1 641 1.15E-135 T 14-10-2018 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.09 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 SUPERFAMILY SSF46589 884 948 6.8E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:3.90.740.10 204 241 6.2E-6 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:3.40.50.620 2 203 5.0E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 944 3.4E-19 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BJD94_13250 4d93764efd31aa3423790f3bd87555f9 951 Gene3D G3DSA:3.90.740.10 242 314 7.2E-9 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 4.8E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 SUPERFAMILY SSF56059 98 288 3.36E-50 T 14-10-2018 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.247 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.40.50.20 1 114 1.5E-40 T 14-10-2018 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 2.1E-84 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.1490.20 115 181 3.3E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_16685 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.470.80 182 299 4.9E-43 T 14-10-2018 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.0E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 Pfam PF00137 ATP synthase subunit C 10 72 2.6E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.438 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 SUPERFAMILY SSF81333 3 78 3.53E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BJD94_11095 f7543cd3f12c408657867d72e0c5ae46 85 Gene3D G3DSA:1.20.20.10 2 77 1.7E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 Gene3D G3DSA:1.10.10.10 4 92 5.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 SUPERFAMILY SSF53850 91 288 6.15E-24 T 14-10-2018 BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 Pfam PF03466 LysR substrate binding domain 96 288 6.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 SUPERFAMILY SSF46785 2 85 1.07E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_08575 b802aae467f0ccac5a7110de0532f232 296 Gene3D G3DSA:3.40.190.290 95 292 2.2E-8 T 14-10-2018 BJD94_01655 e3eb6ecc755081a0c8edbc61caeb07cc 337 Pfam PF13289 SIR2-like domain 171 312 4.3E-20 T 14-10-2018 IPR039444 SIR2-like domain BJD94_01655 e3eb6ecc755081a0c8edbc61caeb07cc 337 SUPERFAMILY SSF52467 71 332 5.89E-10 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_09050 28041eee6d0cd868ba1b2202257a0124 442 Gene3D G3DSA:1.20.1600.10 23 442 7.8E-117 T 14-10-2018 BJD94_09050 28041eee6d0cd868ba1b2202257a0124 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 436 1.1E-105 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BJD94_09050 28041eee6d0cd868ba1b2202257a0124 442 SUPERFAMILY SSF56954 1 430 1.05E-90 T 14-10-2018 BJD94_09050 28041eee6d0cd868ba1b2202257a0124 442 Pfam PF02321 Outer membrane efflux protein 25 207 8.6E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_09050 28041eee6d0cd868ba1b2202257a0124 442 Pfam PF02321 Outer membrane efflux protein 231 424 3.2E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_18810 24db94c643bde32aba193aa23b92a751 902 Pfam PF07971 Glycosyl hydrolase family 92 286 891 3.7E-141 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD94_18810 24db94c643bde32aba193aa23b92a751 902 SUPERFAMILY SSF48208 313 887 3.51E-27 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_18810 24db94c643bde32aba193aa23b92a751 902 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 8 595 1.0E-85 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.0E-155 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 PIRSF PIRSF038994 1 378 2.2E-121 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 Gene3D G3DSA:3.20.20.140 55 341 3.3E-143 T 14-10-2018 BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 Gene3D G3DSA:2.30.40.10 6 373 3.3E-143 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 Pfam PF01979 Amidohydrolase family 51 374 9.1E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 SUPERFAMILY SSF51556 54 347 2.93E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_07070 2d91ee4f6bfb90708b876b19cf14b150 378 SUPERFAMILY SSF51338 1 53 1.16E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 SUPERFAMILY SSF53901 296 434 5.52E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 SUPERFAMILY SSF53901 14 293 1.0E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 PIRSF PIRSF000429 8 435 2.3E-118 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.738 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.5E-273 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 4.0E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 2.4E-61 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 2.8E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 BJD94_00790 7e0a94bbf1f79779ac4e49f2742266d8 435 Gene3D G3DSA:3.40.47.10 4 434 9.1E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.5E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.109 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 SUPERFAMILY SSF118001 1 70 1.44E-28 T 14-10-2018 IPR036685 YehU-like superfamily BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 Gene3D G3DSA:1.10.10.610 1 70 4.2E-30 T 14-10-2018 IPR036685 YehU-like superfamily BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 PIRSF PIRSF006169 1 70 2.6E-36 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BJD94_12515 63a4f6cd497fede8795dcb0262ee5949 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 4.0E-24 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 SUPERFAMILY SSF51120 6 168 3.77E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 PRINTS PR00313 NodO calcium binding signature 52 60 7.7E-13 T 14-10-2018 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 PRINTS PR00313 NodO calcium binding signature 106 115 7.7E-13 T 14-10-2018 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 PRINTS PR00313 NodO calcium binding signature 31 42 7.7E-13 T 14-10-2018 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 PRINTS PR00313 NodO calcium binding signature 43 51 7.7E-13 T 14-10-2018 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 5.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 112 0.031 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 4.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 1.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 5.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Gene3D G3DSA:2.150.10.10 63 187 1.8E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_19730 59bfc55f849d99249c4a50dbdee821e0 190 Gene3D G3DSA:2.150.10.10 2 62 4.0E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD94_08230 2475df50e040e9b102f05c3379f2836b 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.3E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BJD94_08230 2475df50e040e9b102f05c3379f2836b 127 Gene3D G3DSA:3.90.1010.10 1 127 5.5E-59 T 14-10-2018 BJD94_08230 2475df50e040e9b102f05c3379f2836b 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.3E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BJD94_08230 2475df50e040e9b102f05c3379f2836b 127 SUPERFAMILY SSF82649 1 125 9.94E-48 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 SUPERFAMILY SSF56014 435 567 4.45E-33 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Gene3D G3DSA:3.30.413.10 432 575 2.4E-34 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.718 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Gene3D G3DSA:3.30.413.10 146 354 2.4E-83 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 SUPERFAMILY SSF56014 154 350 2.88E-58 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 SUPERFAMILY SSF55124 352 429 1.37E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 2.6E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 1.2E-287 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 1.2E-45 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Gene3D G3DSA:3.90.480.20 21 423 2.4E-83 T 14-10-2018 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 553 1.4E-4 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 SUPERFAMILY SSF55124 17 150 1.08E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_12915 c25d261cc3baaeb8595f80958007d13f 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 SUPERFAMILY SSF53790 12 252 5.23E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 Gene3D G3DSA:3.40.1010.10 11 128 2.2E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 224 9.3E-50 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 Gene3D G3DSA:3.30.950.10 129 251 4.8E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 246 5.0E-94 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_21800 1a125a9f5796e56f5d4eb48f4e69a1d7 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_03790 6dcb062769daac0855ccb082c9c9a4ab 268 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 2.3E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 BJD94_16165 1fafb0701250e752464da7af92cca512 219 Gene3D G3DSA:2.40.10.220 111 215 1.5E-7 T 14-10-2018 BJD94_16165 1fafb0701250e752464da7af92cca512 219 Pfam PF07238 PilZ domain 112 198 1.9E-12 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_16165 1fafb0701250e752464da7af92cca512 219 Gene3D G3DSA:2.30.110.10 2 110 7.3E-8 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_16165 1fafb0701250e752464da7af92cca512 219 Pfam PF12945 Flagellar protein YcgR 15 103 6.0E-9 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BJD94_16165 1fafb0701250e752464da7af92cca512 219 SUPERFAMILY SSF141371 2 113 6.28E-25 T 14-10-2018 BJD94_16165 1fafb0701250e752464da7af92cca512 219 SUPERFAMILY SSF141371 114 215 1.37E-20 T 14-10-2018 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 5.2E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 2.0E-81 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.225 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PIRSF PIRSF006160 1 162 5.0E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 SUPERFAMILY SSF63411 4 162 2.01E-65 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 4.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 4.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_13915 65916800db88979db2b6bd6c9c139ba1 172 Gene3D G3DSA:3.30.1360.80 1 172 2.9E-72 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 SUPERFAMILY SSF48600 5 97 2.44E-26 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 Pfam PF01817 Chorismate mutase type II 17 93 9.0E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 SMART SM00830 17 96 8.7E-25 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 PIRSF PIRSF029775 1 104 1.8E-43 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 93 4.7E-26 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_16655 a15bee330da47be60f2cf56e4635611b 109 Gene3D G3DSA:1.20.59.10 4 104 1.5E-36 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 8.2E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF55315 3 77 2.35E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 8.7E-86 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF75217 69 244 6.21E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.30.1330.30 1 77 2.3E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 5.5E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.40.1280.10 78 244 8.9E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.65 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BJD94_12455 9f198aa56028a5b4711c6f5e7cb67422 247 SMART SM00967 5 81 4.6E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD94_10120 65b10cded32356890e8815fe03a37a0e 405 Pfam PF13439 Glycosyltransferase Family 4 13 218 3.7E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_10120 65b10cded32356890e8815fe03a37a0e 405 Pfam PF00534 Glycosyl transferases group 1 233 363 1.5E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_10120 65b10cded32356890e8815fe03a37a0e 405 SUPERFAMILY SSF53756 5 400 5.76E-49 T 14-10-2018 BJD94_10120 65b10cded32356890e8815fe03a37a0e 405 Gene3D G3DSA:3.40.50.2000 231 392 1.3E-31 T 14-10-2018 BJD94_16000 3d79eb8adacf05fe830ddae0da378412 142 SUPERFAMILY SSF55729 32 139 5.23E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_16000 3d79eb8adacf05fe830ddae0da378412 142 Pfam PF00583 Acetyltransferase (GNAT) family 35 117 1.1E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_16000 3d79eb8adacf05fe830ddae0da378412 142 Gene3D G3DSA:3.40.630.30 35 138 1.9E-25 T 14-10-2018 BJD94_12660 1b5e28abaa1a0b2cf4114f9617832c63 80 Pfam PF06005 Cell division protein ZapB 1 77 5.4E-24 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 BJD94_12660 1b5e28abaa1a0b2cf4114f9617832c63 80 Gene3D G3DSA:1.20.5.340 1 79 1.3E-28 T 14-10-2018 BJD94_12660 1b5e28abaa1a0b2cf4114f9617832c63 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.654 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Gene3D G3DSA:3.30.450.20 121 239 3.1E-19 T 14-10-2018 BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Pfam PF13426 PAS domain 140 239 4.1E-8 T 14-10-2018 IPR000014 PAS domain BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Pfam PF00563 EAL domain 426 658 1.5E-60 T 14-10-2018 IPR001633 EAL domain BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 241 2.1E-12 T 14-10-2018 IPR000014 PAS domain BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 SMART SM00091 129 195 1.8E-7 T 14-10-2018 IPR000014 PAS domain BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 SUPERFAMILY SSF55785 126 238 1.05E-17 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Gene3D G3DSA:3.20.20.450 408 665 2.7E-69 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 SUPERFAMILY SSF141868 422 662 1.16E-64 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 SMART SM00052 416 663 1.3E-68 T 14-10-2018 IPR001633 EAL domain BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Gene3D G3DSA:3.10.580.10 684 819 8.0E-10 T 14-10-2018 BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 Gene3D G3DSA:3.30.70.270 252 407 9.3E-6 T 14-10-2018 BJD94_01745 70d5320f5fdb4ee43baf6065da633a9f 820 SUPERFAMILY SSF54631 687 817 8.34E-13 T 14-10-2018 BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.9E-209 T 14-10-2018 IPR004482 Mg chelatase-related protein BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 Gene3D G3DSA:3.30.230.10 1 167 5.3E-7 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 2.2E-90 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 SUPERFAMILY SSF52540 188 500 1.98E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 SMART SM00382 210 390 9.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 Gene3D G3DSA:3.40.50.300 190 500 8.6E-55 T 14-10-2018 BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 SUPERFAMILY SSF54211 2 169 2.96E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.9E-47 T 14-10-2018 BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.8E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD94_11010 698380dab6b52b717e745a13a92f0dee 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD94_15045 36b038c5453ac8e4c9132d5df4aa486e 184 Gene3D G3DSA:3.30.700.10 7 162 1.4E-12 T 14-10-2018 BJD94_15045 36b038c5453ac8e4c9132d5df4aa486e 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_15045 36b038c5453ac8e4c9132d5df4aa486e 184 SUPERFAMILY SSF54523 7 136 8.63E-16 T 14-10-2018 BJD94_15045 36b038c5453ac8e4c9132d5df4aa486e 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_15045 36b038c5453ac8e4c9132d5df4aa486e 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_02240 0392f9d59b378bd2db713b8731f88a0d 492 Pfam PF16116 Domain of unknown function (DUF4832) 320 470 1.7E-16 T 14-10-2018 IPR032267 Domain of unknown function DUF4832 BJD94_02240 0392f9d59b378bd2db713b8731f88a0d 492 Gene3D G3DSA:3.20.20.80 74 240 5.5E-15 T 14-10-2018 BJD94_02240 0392f9d59b378bd2db713b8731f88a0d 492 Pfam PF02449 Beta-galactosidase 87 200 3.2E-7 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD94_02240 0392f9d59b378bd2db713b8731f88a0d 492 SUPERFAMILY SSF51445 88 282 3.05E-12 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 SUPERFAMILY SSF82866 166 382 3.27E-32 T 14-10-2018 BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 Gene3D G3DSA:1.20.1640.10 587 776 3.7E-16 T 14-10-2018 BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 SUPERFAMILY SSF82866 585 766 7.19E-33 T 14-10-2018 BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 Gene3D G3DSA:1.20.1640.10 185 400 5.0E-14 T 14-10-2018 BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 Pfam PF03176 MMPL family 590 763 1.2E-13 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BJD94_02485 29b03899260dd1e33f4412d0a94934eb 789 Pfam PF03176 MMPL family 60 385 3.2E-20 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00862 158 234 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00448 3 113 6.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:3.40.50.2300 1 136 2.7E-33 T 14-10-2018 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF46894 133 235 6.24E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF52172 2 123 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_01390 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:1.10.10.10 137 237 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19705 01b68f590b1b71a7508e58c5cde2badc 318 SUPERFAMILY SSF52540 6 290 4.7E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19705 01b68f590b1b71a7508e58c5cde2badc 318 Gene3D G3DSA:1.10.8.300 199 315 2.7E-38 T 14-10-2018 BJD94_19705 01b68f590b1b71a7508e58c5cde2badc 318 PIRSF PIRSF002849 1 318 2.1E-127 T 14-10-2018 BJD94_19705 01b68f590b1b71a7508e58c5cde2badc 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.9E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BJD94_19705 01b68f590b1b71a7508e58c5cde2badc 318 Gene3D G3DSA:3.40.50.300 17 183 8.6E-47 T 14-10-2018 BJD94_20105 820fd47a13be22db8801f813b6d8ce74 338 SMART SM00267 168 338 9.7E-53 T 14-10-2018 IPR000160 GGDEF domain BJD94_20105 820fd47a13be22db8801f813b6d8ce74 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 2.5E-41 T 14-10-2018 IPR000160 GGDEF domain BJD94_20105 820fd47a13be22db8801f813b6d8ce74 338 Gene3D G3DSA:3.30.70.270 165 336 1.1E-50 T 14-10-2018 BJD94_20105 820fd47a13be22db8801f813b6d8ce74 338 SUPERFAMILY SSF55073 184 336 2.28E-42 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_20105 820fd47a13be22db8801f813b6d8ce74 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 3.7E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 Pfam PF00128 Alpha amylase, catalytic domain 48 264 2.0E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 Gene3D G3DSA:3.20.20.80 20 387 1.1E-83 T 14-10-2018 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 SUPERFAMILY SSF51445 32 411 1.36E-62 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 PRINTS PR00110 Alpha-amylase signature 240 258 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 PRINTS PR00110 Alpha-amylase signature 98 109 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 PRINTS PR00110 Alpha-amylase signature 211 222 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 PRINTS PR00110 Alpha-amylase signature 65 82 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 PRINTS PR00110 Alpha-amylase signature 306 318 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 SMART SM00642 24 382 5.5E-42 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_15000 a794d0f46e5a890a750e302a5045eef8 466 SUPERFAMILY SSF51011 404 464 4.5E-5 T 14-10-2018 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 1.7E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 Pfam PF00209 Sodium:neurotransmitter symporter family 149 447 3.3E-32 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05145 63ebf765c3dc85ce43a64f3bdaa95814 475 SUPERFAMILY SSF161070 9 457 3.14E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.479 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 Gene3D G3DSA:3.40.640.10 16 262 3.8E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 Gene3D G3DSA:3.90.1150.10 5 375 3.8E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 9.7E-230 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 Pfam PF00266 Aminotransferase class-V 5 368 9.1E-90 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 PIRSF PIRSF005572 2 384 1.3E-138 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD94_08235 f6dd106e734472621d591a99f2ae4d80 404 SUPERFAMILY SSF53383 5 391 7.85E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 SUPERFAMILY SSF46785 8 90 7.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 Gene3D G3DSA:1.10.10.10 5 92 1.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 Gene3D G3DSA:3.40.190.10 94 293 2.4E-59 T 14-10-2018 BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 Pfam PF03466 LysR substrate binding domain 90 295 2.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 SUPERFAMILY SSF53850 90 298 1.36E-46 T 14-10-2018 BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 Gene3D G3DSA:3.40.190.10 165 267 2.4E-59 T 14-10-2018 BJD94_06825 8b89652f57a0312e8d6c612c54cc81ee 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16425 e4f8a32394df7868a6c04524fc302580 166 SUPERFAMILY SSF48452 4 90 8.78E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 Pfam PF00677 Lumazine binding domain 100 184 1.3E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 Pfam PF00677 Lumazine binding domain 3 87 2.6E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 PIRSF PIRSF000498 1 212 9.2E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 SUPERFAMILY SSF63380 1 89 4.68E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 Gene3D G3DSA:2.40.30.20 102 206 1.2E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 3.1E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 Gene3D G3DSA:2.40.30.20 1 89 2.6E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD94_07850 c5bb4573566a5508b7ef27178260620f 218 SUPERFAMILY SSF63380 93 195 2.3E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_01095 e40c088cf98cd3008718670a92678c7c 180 Gene3D G3DSA:3.40.50.1820 1 180 1.6E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_01095 e40c088cf98cd3008718670a92678c7c 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.286 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 BJD94_01095 e40c088cf98cd3008718670a92678c7c 180 SUPERFAMILY SSF53474 2 176 5.92E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_01095 e40c088cf98cd3008718670a92678c7c 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 9.8E-71 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BJD94_01440 70adaea7f853ecd385db80f04564bebf 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 8.4E-108 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase BJD94_01440 70adaea7f853ecd385db80f04564bebf 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 2.3E-59 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices BJD94_15920 af7c6bbdd50a3fbfd614d72a608823b5 313 SUPERFAMILY SSF55347 121 269 2.75E-44 T 14-10-2018 BJD94_15920 af7c6bbdd50a3fbfd614d72a608823b5 313 Gene3D G3DSA:3.40.50.720 1 118 6.6E-27 T 14-10-2018 BJD94_15920 af7c6bbdd50a3fbfd614d72a608823b5 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.1E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD94_15920 af7c6bbdd50a3fbfd614d72a608823b5 313 SUPERFAMILY SSF51735 1 136 1.41E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_15920 af7c6bbdd50a3fbfd614d72a608823b5 313 Gene3D G3DSA:3.30.360.10 119 312 8.5E-55 T 14-10-2018 BJD94_07300 1a0657c02b7dc05812b710f6dbe9875a 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD94_07300 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD94_07300 1a0657c02b7dc05812b710f6dbe9875a 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.9E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BJD94_07300 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 3.1E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD94_18240 1f7b49619c5324ea0610fca96f67f900 292 Gene3D G3DSA:3.40.1190.20 1 290 1.7E-88 T 14-10-2018 IPR029056 Ribokinase-like BJD94_18240 1f7b49619c5324ea0610fca96f67f900 292 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 8.4E-105 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD94_18240 1f7b49619c5324ea0610fca96f67f900 292 SUPERFAMILY SSF53613 2 281 2.83E-70 T 14-10-2018 IPR029056 Ribokinase-like BJD94_18240 1f7b49619c5324ea0610fca96f67f900 292 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.2E-21 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD94_18240 1f7b49619c5324ea0610fca96f67f900 292 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 53.49 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 BJD94_05615 895eaa7108267ade587a1bbee9bacbcc 353 SUPERFAMILY SSF52096 103 303 9.33E-31 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_05615 895eaa7108267ade587a1bbee9bacbcc 353 Gene3D G3DSA:3.40.1750.20 206 270 8.4E-45 T 14-10-2018 BJD94_05615 895eaa7108267ade587a1bbee9bacbcc 353 Pfam PF01343 Peptidase family S49 166 314 2.4E-47 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD94_05615 895eaa7108267ade587a1bbee9bacbcc 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.1E-55 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 BJD94_05615 895eaa7108267ade587a1bbee9bacbcc 353 Gene3D G3DSA:3.90.226.10 109 306 8.4E-45 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF51621 249 549 4.45E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.5E-247 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.1E-32 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF52009 125 243 9.29E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 SUPERFAMILY SSF47831 24 143 8.89E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.4E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.5E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:3.20.20.60 234 574 1.6E-125 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:3.50.30.10 4 233 1.2E-80 T 14-10-2018 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 Gene3D G3DSA:1.10.274.10 21 146 1.2E-80 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD94_07225 c1eb78bf81473d36bfb1797749fac167 574 PIRSF PIRSF000732 1 574 9.2E-220 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BJD94_15870 6f6bd3ad115e8e60d1a781c448dd8e9e 346 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 339 2.5E-96 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BJD94_15870 6f6bd3ad115e8e60d1a781c448dd8e9e 346 SUPERFAMILY SSF51004 85 329 4.32E-27 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BJD94_15870 6f6bd3ad115e8e60d1a781c448dd8e9e 346 Gene3D G3DSA:2.130.10.10 1 340 1.6E-86 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_05570 635c63627961802e8a40c7f931e67a61 613 Gene3D G3DSA:3.10.105.10 329 546 2.1E-42 T 14-10-2018 BJD94_05570 635c63627961802e8a40c7f931e67a61 613 Gene3D G3DSA:3.40.190.10 25 328 1.9E-45 T 14-10-2018 BJD94_05570 635c63627961802e8a40c7f931e67a61 613 SUPERFAMILY SSF53850 45 566 1.74E-95 T 14-10-2018 BJD94_05570 635c63627961802e8a40c7f931e67a61 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 491 1.2E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_05570 635c63627961802e8a40c7f931e67a61 613 PIRSF PIRSF002741 3 572 6.9E-68 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 SUPERFAMILY SSF50993 30 397 1.86E-33 T 14-10-2018 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 395 2.0E-32 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 496 515 7.7E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 442 460 7.7E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 492 7.7E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 7.7E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 7.7E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 Pfam PF00326 Prolyl oligopeptidase family 457 677 5.6E-61 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 SUPERFAMILY SSF53474 412 658 7.96E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 Gene3D G3DSA:2.130.10.120 82 403 1.4E-150 T 14-10-2018 BJD94_19620 bd518629753a72f735edee0bf1ed0dcd 684 Gene3D G3DSA:3.40.50.1820 32 672 1.4E-150 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_00550 a6211bb39447c2041f940dc1542880cf 142 Gene3D G3DSA:3.30.160.170 38 139 4.7E-14 T 14-10-2018 IPR035924 FlaG-like superfamily BJD94_00550 a6211bb39447c2041f940dc1542880cf 142 Pfam PF03646 FlaG protein 40 141 1.4E-24 T 14-10-2018 IPR005186 FlaG protein BJD94_00550 a6211bb39447c2041f940dc1542880cf 142 SUPERFAMILY SSF160214 44 141 8.5E-23 T 14-10-2018 IPR035924 FlaG-like superfamily BJD94_05420 38bc4aa9ffa0539ba3d2899c6e02e621 191 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 1 180 1.0E-103 T 14-10-2018 BJD94_05420 38bc4aa9ffa0539ba3d2899c6e02e621 191 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 189 31.1 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD BJD94_05420 38bc4aa9ffa0539ba3d2899c6e02e621 191 Gene3D G3DSA:1.10.3890.10 1 191 4.5E-72 T 14-10-2018 IPR035932 HflD-like superfamily BJD94_05420 38bc4aa9ffa0539ba3d2899c6e02e621 191 Pfam PF04356 Protein of unknown function (DUF489) 1 181 5.9E-73 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD BJD94_05420 38bc4aa9ffa0539ba3d2899c6e02e621 191 SUPERFAMILY SSF101322 1 190 2.48E-75 T 14-10-2018 IPR035932 HflD-like superfamily BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.083 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 1.9E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 Gene3D G3DSA:3.40.50.1380 1 151 1.3E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 SMART SM00851 25 118 3.3E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 Pfam PF02142 MGS-like domain 25 118 5.4E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 SUPERFAMILY SSF52335 3 150 2.49E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD94_20805 88c4648327f4116efd0e78c8997d8c10 151 PIRSF PIRSF006614 8 151 6.1E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BJD94_18795 92f6108607c9fa6337257321136d5763 259 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 1.8E-21 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_18795 92f6108607c9fa6337257321136d5763 259 SUPERFAMILY SSF55804 129 250 2.35E-18 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_18795 92f6108607c9fa6337257321136d5763 259 Gene3D G3DSA:3.30.1340.10 2 90 8.0E-7 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_18795 92f6108607c9fa6337257321136d5763 259 PIRSF PIRSF029195 1 259 2.7E-178 T 14-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 BJD94_18795 92f6108607c9fa6337257321136d5763 259 SUPERFAMILY SSF55594 9 89 1.7E-12 T 14-10-2018 IPR035895 HPr-like superfamily BJD94_18795 92f6108607c9fa6337257321136d5763 259 Pfam PF00381 PTS HPr component phosphorylation site 12 85 1.8E-4 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD94_18795 92f6108607c9fa6337257321136d5763 259 Gene3D G3DSA:3.40.930.10 106 252 6.5E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_10735 73118b9741b47b5abd072901dff5c649 435 Gene3D G3DSA:3.40.50.300 2 222 7.1E-72 T 14-10-2018 BJD94_10735 73118b9741b47b5abd072901dff5c649 435 SMART SM00490 270 351 1.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_10735 73118b9741b47b5abd072901dff5c649 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.8E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_10735 73118b9741b47b5abd072901dff5c649 435 SUPERFAMILY SSF52540 85 364 1.3E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10735 73118b9741b47b5abd072901dff5c649 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.242 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 BJD94_10735 73118b9741b47b5abd072901dff5c649 435 Gene3D G3DSA:3.40.50.300 229 409 9.3E-46 T 14-10-2018 BJD94_10735 73118b9741b47b5abd072901dff5c649 435 SMART SM00487 28 234 6.3E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_10735 73118b9741b47b5abd072901dff5c649 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_10735 73118b9741b47b5abd072901dff5c649 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_06465 9f6395e91e6d642129929b651439ae7b 112 SUPERFAMILY SSF158757 15 91 8.76E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily BJD94_06465 9f6395e91e6d642129929b651439ae7b 112 Gene3D G3DSA:1.10.3340.10 11 112 2.6E-45 T 14-10-2018 IPR036810 SMc04008-like superfamily BJD94_06465 9f6395e91e6d642129929b651439ae7b 112 Pfam PF06844 Protein of unknown function (DUF1244) 42 108 3.2E-35 T 14-10-2018 IPR023163 SMc04008-like domain BJD94_06170 498764be878ca6fd976613ce570bb0a5 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.8E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD94_06170 498764be878ca6fd976613ce570bb0a5 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD94_06170 498764be878ca6fd976613ce570bb0a5 138 Gene3D G3DSA:3.10.180.10 3 135 5.4E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_06170 498764be878ca6fd976613ce570bb0a5 138 SUPERFAMILY SSF54593 3 130 6.31E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_06170 498764be878ca6fd976613ce570bb0a5 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 8.3E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_00070 326e136dd227e1d05ec484dbb779a794 103 Gene3D G3DSA:3.30.300.90 1 89 5.2E-35 T 14-10-2018 BJD94_00070 326e136dd227e1d05ec484dbb779a794 103 Pfam PF01722 BolA-like protein 10 83 3.1E-31 T 14-10-2018 IPR002634 BolA protein BJD94_00070 326e136dd227e1d05ec484dbb779a794 103 SUPERFAMILY SSF82657 1 88 1.83E-32 T 14-10-2018 IPR036065 BolA-like superfamily BJD94_00070 326e136dd227e1d05ec484dbb779a794 103 PIRSF PIRSF003113 1 99 3.0E-38 T 14-10-2018 IPR002634 BolA protein BJD94_14850 326e136dd227e1d05ec484dbb779a794 103 Gene3D G3DSA:3.30.300.90 1 89 5.2E-35 T 14-10-2018 BJD94_14850 326e136dd227e1d05ec484dbb779a794 103 Pfam PF01722 BolA-like protein 10 83 3.1E-31 T 14-10-2018 IPR002634 BolA protein BJD94_14850 326e136dd227e1d05ec484dbb779a794 103 SUPERFAMILY SSF82657 1 88 1.83E-32 T 14-10-2018 IPR036065 BolA-like superfamily BJD94_14850 326e136dd227e1d05ec484dbb779a794 103 PIRSF PIRSF003113 1 99 3.0E-38 T 14-10-2018 IPR002634 BolA protein BJD94_01365 fd91b01e651054d8e4fd73dd025b9d17 102 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 9.4E-7 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 Gene3D G3DSA:2.40.50.530 1 64 4.7E-17 T 14-10-2018 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 SUPERFAMILY SSF143034 2 63 2.88E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.458 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.0E-25 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_02645 cd40eb71624e6d3813ba51561564c7cc 64 Pfam PF01632 Ribosomal protein L35 2 61 1.1E-19 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_01800 ae9cfa0bd9c42dbeb791626b844a6b75 264 SUPERFAMILY SSF52540 2 229 8.78E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01800 ae9cfa0bd9c42dbeb791626b844a6b75 264 SMART SM00382 31 226 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_01800 ae9cfa0bd9c42dbeb791626b844a6b75 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_01800 ae9cfa0bd9c42dbeb791626b844a6b75 264 Gene3D G3DSA:3.40.50.300 1 258 5.4E-52 T 14-10-2018 BJD94_01800 ae9cfa0bd9c42dbeb791626b844a6b75 264 Pfam PF00005 ABC transporter 22 177 4.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_12705 e379172361fa7df086971af0209f1851 425 PIRSF PIRSF000106 25 425 3.9E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BJD94_12705 e379172361fa7df086971af0209f1851 425 SMART SM00919 173 409 1.0E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD94_12705 e379172361fa7df086971af0209f1851 425 SUPERFAMILY SSF53223 20 171 4.03E-52 T 14-10-2018 BJD94_12705 e379172361fa7df086971af0209f1851 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 4.7E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD94_12705 e379172361fa7df086971af0209f1851 425 Gene3D G3DSA:3.40.50.720 171 425 1.5E-81 T 14-10-2018 BJD94_12705 e379172361fa7df086971af0209f1851 425 SMART SM01274 28 161 1.2E-75 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD94_12705 e379172361fa7df086971af0209f1851 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BJD94_12705 e379172361fa7df086971af0209f1851 425 Gene3D G3DSA:3.40.50.10380 6 170 1.7E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BJD94_12705 e379172361fa7df086971af0209f1851 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 125 4.1E-21 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD94_12705 e379172361fa7df086971af0209f1851 425 SUPERFAMILY SSF51735 173 421 2.32E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_19860 66f51a156baeb173cf8eefa45e645ae7 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 2.0E-62 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BJD94_19860 66f51a156baeb173cf8eefa45e645ae7 276 SUPERFAMILY SSF52402 2 276 1.06E-79 T 14-10-2018 BJD94_19860 66f51a156baeb173cf8eefa45e645ae7 276 Pfam PF02540 NAD synthase 21 270 3.4E-61 T 14-10-2018 IPR022310 NAD/GMP synthase BJD94_19860 66f51a156baeb173cf8eefa45e645ae7 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 44.991 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 BJD94_19860 66f51a156baeb173cf8eefa45e645ae7 276 Gene3D G3DSA:3.40.50.620 1 276 1.6E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_09410 c7bc95764da5a3ca9d07bda501e2fc8a 126 Pfam PF04379 ApaG domain 18 103 1.3E-32 T 14-10-2018 IPR007474 ApaG domain BJD94_09410 c7bc95764da5a3ca9d07bda501e2fc8a 126 Gene3D G3DSA:2.60.40.1470 1 126 1.6E-46 T 14-10-2018 IPR036767 ApaG domain superfamily BJD94_09410 c7bc95764da5a3ca9d07bda501e2fc8a 126 SUPERFAMILY SSF110069 6 126 2.09E-46 T 14-10-2018 IPR036767 ApaG domain superfamily BJD94_09410 c7bc95764da5a3ca9d07bda501e2fc8a 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.579 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.076 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 SUPERFAMILY SSF56059 92 295 9.55E-58 T 14-10-2018 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 Gene3D G3DSA:3.30.1490.20 107 162 8.6E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 Pfam PF02222 ATP-grasp domain 101 274 2.5E-53 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 SUPERFAMILY SSF52440 1 88 5.04E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 Gene3D G3DSA:3.40.50.20 1 80 8.6E-18 T 14-10-2018 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 SUPERFAMILY SSF51246 299 373 1.33E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 Gene3D G3DSA:3.30.470.20 163 375 2.0E-73 T 14-10-2018 BJD94_10920 a642b8fd59e162f408138f57773c1f75 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.2E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BJD94_19820 0a14c84846516d73c0df37561e6bf212 161 Gene3D G3DSA:3.10.129.10 2 161 5.3E-43 T 14-10-2018 BJD94_19820 0a14c84846516d73c0df37561e6bf212 161 SUPERFAMILY SSF54637 6 154 5.61E-41 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_19820 0a14c84846516d73c0df37561e6bf212 161 Pfam PF03061 Thioesterase superfamily 22 96 2.4E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Gene3D G3DSA:3.40.50.12740 1 165 4.0E-33 T 14-10-2018 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Pfam PF13581 Histidine kinase-like ATPase domain 438 555 4.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Pfam PF00072 Response regulator receiver domain 3 115 1.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Gene3D G3DSA:3.30.565.10 415 558 9.4E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Gene3D G3DSA:3.60.40.10 166 384 3.3E-39 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 SMART SM00448 1 115 5.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 SUPERFAMILY SSF52172 1 147 4.27E-31 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 379 6.8E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 SMART SM00331 167 379 9.4E-17 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_17895 f5f7a99f533caf1d1edc683220820f4c 558 SUPERFAMILY SSF81606 180 376 1.65E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 Pfam PF00293 NUDIX domain 7 125 2.0E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 SUPERFAMILY SSF55811 1 128 7.72E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 Gene3D G3DSA:3.90.79.10 1 132 1.6E-42 T 14-10-2018 BJD94_08850 5bbe7f92527310cd18438a6183ae8c3f 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 7.9E-43 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD94_21645 a5ccc20cc75f33922b546328873af252 205 SUPERFAMILY SSF50630 68 199 3.8E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_21645 a5ccc20cc75f33922b546328873af252 205 Gene3D G3DSA:2.40.70.10 65 192 6.3E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_21645 a5ccc20cc75f33922b546328873af252 205 Pfam PF05618 Putative ATP-dependant zinc protease 68 202 1.7E-42 T 14-10-2018 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 SUPERFAMILY SSF52374 13 337 2.82E-73 T 14-10-2018 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 Gene3D G3DSA:1.10.240.10 191 305 1.5E-97 T 14-10-2018 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 1.7E-67 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 Pfam PF00579 tRNA synthetases class I (W and Y) 13 292 5.9E-52 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_15995 874d0482b02e6ba6f6fd89c3b9deb642 340 Gene3D G3DSA:3.40.50.620 13 332 1.5E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 3.9E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.454 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Gene3D G3DSA:3.30.70.120 225 298 3.6E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 6.0E-46 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 297 1.6E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 SUPERFAMILY SSF54913 225 297 5.23E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Pfam PF08029 HisG, C-terminal domain 222 295 5.1E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Gene3D G3DSA:3.40.190.10 102 191 1.9E-70 T 14-10-2018 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 SUPERFAMILY SSF53850 5 222 8.29E-67 T 14-10-2018 BJD94_05390 5a40d96cc5a48f3b7ccfbb8b284cc3d0 298 Gene3D G3DSA:3.40.190.10 6 219 1.9E-70 T 14-10-2018 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 48 365 9.7E-77 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 Gene3D G3DSA:3.40.1160.10 1 230 1.2E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 SUPERFAMILY SSF53633 1 222 6.15E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 Pfam PF00696 Amino acid kinase family 6 217 3.9E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 Gene3D G3DSA:3.30.2130.10 233 369 3.4E-5 T 14-10-2018 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 PIRSF PIRSF000726 1 50 8.7E-14 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 PIRSF PIRSF000726 46 305 2.2E-74 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_13825 f0d3dd54d616c0e1d654c27b48a95de4 381 PIRSF PIRSF000726 288 372 3.1 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_20230 102d94cb7eb01378ccc5805cc5c5e90c 494 Pfam PF07690 Major Facilitator Superfamily 10 423 7.9E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_20230 102d94cb7eb01378ccc5805cc5c5e90c 494 Gene3D G3DSA:1.20.1250.20 7 475 2.2E-58 T 14-10-2018 BJD94_20230 102d94cb7eb01378ccc5805cc5c5e90c 494 SUPERFAMILY SSF103473 9 480 1.83E-18 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.498 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.4E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 SMART SM00883 2 95 2.6E-39 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 82 95 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 Gene3D G3DSA:2.30.33.40 1 96 5.3E-33 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 SUPERFAMILY SSF50129 1 96 8.12E-28 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_17820 9de5a28f64a06bdf32ff9f38832bd0d5 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Gene3D G3DSA:2.60.120.10 151 312 6.3E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 6.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 577 6.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 591 6.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 6.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Gene3D G3DSA:3.40.50.2300 1 136 5.0E-8 T 14-10-2018 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 SUPERFAMILY SSF47384 329 366 1.29E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Pfam PF00027 Cyclic nucleotide-binding domain 196 283 2.3E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Gene3D G3DSA:3.30.565.10 482 640 2.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 SMART SM00387 522 635 3.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 SUPERFAMILY SSF52172 1 124 1.54E-7 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 SUPERFAMILY SSF51206 195 305 1.31E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 334 360 1.3E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 SUPERFAMILY SSF55874 476 635 5.37E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_04920 de3c605c6d6ead437c4242ee38513637 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 633 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17790 f31b8fc10c27ce2b3994f276fcbcbe4b 184 Gene3D G3DSA:3.40.50.360 1 184 8.7E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_17790 f31b8fc10c27ce2b3994f276fcbcbe4b 184 Pfam PF03358 NADPH-dependent FMN reductase 14 133 4.7E-13 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD94_17790 f31b8fc10c27ce2b3994f276fcbcbe4b 184 SUPERFAMILY SSF52218 2 184 1.57E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_00300 82a0e7ceb353cee0c9d8a19b70f61731 380 SUPERFAMILY SSF53756 7 379 5.38E-29 T 14-10-2018 BJD94_00300 82a0e7ceb353cee0c9d8a19b70f61731 380 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 377 1.2E-143 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD94_00300 82a0e7ceb353cee0c9d8a19b70f61731 380 Pfam PF02684 Lipid-A-disaccharide synthetase 8 373 6.0E-130 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD94_00300 82a0e7ceb353cee0c9d8a19b70f61731 380 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 379 41.713 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD94_06670 85e722baca6a45e3a19f67a0ad01a9af 415 SUPERFAMILY SSF53850 20 414 4.51E-63 T 14-10-2018 BJD94_06670 85e722baca6a45e3a19f67a0ad01a9af 415 Gene3D G3DSA:3.40.190.10 24 371 4.3E-161 T 14-10-2018 BJD94_06670 85e722baca6a45e3a19f67a0ad01a9af 415 Pfam PF01547 Bacterial extracellular solute-binding protein 39 291 6.5E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_06670 85e722baca6a45e3a19f67a0ad01a9af 415 Gene3D G3DSA:3.40.190.10 139 396 4.3E-161 T 14-10-2018 BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 Gene3D G3DSA:1.10.287.130 191 299 2.1E-7 T 14-10-2018 BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 1.6E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 Gene3D G3DSA:3.30.565.10 307 448 1.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 SUPERFAMILY SSF55874 307 443 1.83E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_05050 9935916591d0b71d579e6f732ce6a626 449 SMART SM00387 340 447 5.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_00860 22af9848a5563768cdc2ffea9720534a 1948 Gene3D G3DSA:1.20.58.2200 1884 1945 4.8E-13 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily BJD94_00860 22af9848a5563768cdc2ffea9720534a 1948 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 142 1.3E-26 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal BJD94_00860 22af9848a5563768cdc2ffea9720534a 1948 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1903 1943 5.1E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 SUPERFAMILY SSF89360 16 112 2.75E-22 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 193 2.0E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 Gene3D G3DSA:3.30.300.130 116 204 3.8E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 114 1.4E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 Gene3D G3DSA:2.60.300.12 15 113 1.0E-13 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 SUPERFAMILY SSF117916 110 199 6.98E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 Pfam PF01106 NifU-like domain 126 192 6.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 17 207 2.7E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BJD94_10415 1028a2059532b700d5850ac6d2f8db91 207 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 207 44.072 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 4.2E-136 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 SUPERFAMILY SSF50331 237 359 8.26E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 Pfam PF03459 TOBE domain 293 359 7.3E-13 T 14-10-2018 IPR005116 Transport-associated OB, type 1 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 Gene3D G3DSA:3.40.50.300 1 229 8.9E-53 T 14-10-2018 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 Pfam PF00005 ABC transporter 18 158 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 Gene3D G3DSA:2.40.50.100 292 360 2.2E-13 T 14-10-2018 BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 SMART SM00382 25 208 4.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_21615 caa0e94a066a512acd9c79e2e96e6c2e 368 SUPERFAMILY SSF52540 11 237 2.07E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 SUPERFAMILY SSF52172 1 128 2.56E-33 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 Gene3D G3DSA:2.40.50.40 154 220 2.3E-11 T 14-10-2018 BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 Pfam PF04397 LytTr DNA-binding domain 161 254 2.8E-28 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 SMART SM00448 4 116 2.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 Gene3D G3DSA:3.40.50.2300 1 127 2.2E-32 T 14-10-2018 BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 Pfam PF00072 Response regulator receiver domain 7 115 9.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_18050 2cd7e33c87a3cddb076bccf253ebca13 255 SMART SM00850 160 255 5.4E-30 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD94_09445 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09445 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09445 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09445 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09445 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 SUPERFAMILY SSF53098 3 136 3.19E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 SMART SM00732 3 104 5.9E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 Pfam PF03652 Holliday junction resolvase 4 136 4.7E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 Gene3D G3DSA:3.30.420.140 1 138 2.5E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.45 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD94_13500 8316d03d12650647b032e2f7b9aac5e4 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 3.5E-49 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD94_08510 2a9af00f62fd3be0c58a6287ee1f0b0c 598 Gene3D G3DSA:1.20.1530.20 5 388 3.5E-16 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BJD94_08510 2a9af00f62fd3be0c58a6287ee1f0b0c 598 Pfam PF02254 TrkA-N domain 399 491 4.9E-7 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_08510 2a9af00f62fd3be0c58a6287ee1f0b0c 598 SUPERFAMILY SSF51735 399 493 3.57E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_08510 2a9af00f62fd3be0c58a6287ee1f0b0c 598 Gene3D G3DSA:3.40.50.720 397 500 7.1E-10 T 14-10-2018 BJD94_08510 2a9af00f62fd3be0c58a6287ee1f0b0c 598 Pfam PF00999 Sodium/hydrogen exchanger family 18 386 1.2E-33 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD94_20860 bd200bc93e9e7f0ed5ba82fc242a5951 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 57 659 5.1E-162 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB BJD94_20860 bd200bc93e9e7f0ed5ba82fc242a5951 660 SUPERFAMILY SSF56935 147 439 1.01E-6 T 14-10-2018 BJD94_20860 bd200bc93e9e7f0ed5ba82fc242a5951 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 657 4.9E-157 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 2.6E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 8.5E-191 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 SMART SM00859 2 121 6.2E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.199 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 5.7E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 PIRSF PIRSF000148 1 371 6.9E-67 T 14-10-2018 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 SUPERFAMILY SSF51735 1 146 5.11E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 Gene3D G3DSA:3.40.50.720 3 356 3.1E-148 T 14-10-2018 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 Gene3D G3DSA:3.30.360.10 134 350 3.1E-148 T 14-10-2018 BJD94_06240 86b8da5ec9b36efd8f18baf1e01025c7 371 SUPERFAMILY SSF55347 133 354 4.76E-78 T 14-10-2018 BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.3E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 4.7E-170 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 Gene3D G3DSA:3.40.50.300 1 260 3.8E-45 T 14-10-2018 BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 Gene3D G3DSA:3.40.50.300 272 553 7.5E-51 T 14-10-2018 BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 PIRSF PIRSF003128 1 554 2.9E-159 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BJD94_08025 0bd322b608a370dc7a7faf34f02ef39d 554 SUPERFAMILY SSF52540 1 510 3.4E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.6E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.6E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 Gene3D G3DSA:1.10.10.60 176 226 5.0E-13 T 14-10-2018 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 Pfam PF12833 Helix-turn-helix domain 199 277 6.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 Gene3D G3DSA:1.10.10.60 227 279 5.7E-18 T 14-10-2018 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 SUPERFAMILY SSF46689 179 226 2.69E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 SUPERFAMILY SSF46689 229 278 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 SMART SM00342 193 276 1.2E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18790 f28f8d89106802b81a19b0b9a7a85972 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_20950 23d1a73f1262bedc9c6c302b050750b5 362 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 335 3.0E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD94_20950 23d1a73f1262bedc9c6c302b050750b5 362 Gene3D G3DSA:3.20.20.70 1 362 2.9E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_20950 23d1a73f1262bedc9c6c302b050750b5 362 SUPERFAMILY SSF51395 1 361 2.82E-109 T 14-10-2018 BJD94_16715 cf9e7df8df3f3527d4c25396616e6bf3 191 SUPERFAMILY SSF49503 82 189 1.24E-22 T 14-10-2018 IPR008972 Cupredoxin BJD94_16715 cf9e7df8df3f3527d4c25396616e6bf3 191 Gene3D G3DSA:2.60.40.420 73 191 1.6E-17 T 14-10-2018 IPR008972 Cupredoxin BJD94_19630 5f5e5b52c47e1c13e464c9a604943054 763 SUPERFAMILY SSF49785 589 717 3.1E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_19630 5f5e5b52c47e1c13e464c9a604943054 763 Gene3D G3DSA:2.60.120.260 592 742 3.3E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_19630 5f5e5b52c47e1c13e464c9a604943054 763 SUPERFAMILY SSF55486 171 486 6.16E-43 T 14-10-2018 BJD94_19630 5f5e5b52c47e1c13e464c9a604943054 763 Pfam PF01483 Proprotein convertase P-domain 630 715 1.6E-18 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 Pfam PF03466 LysR substrate binding domain 85 287 2.2E-23 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 57 3.7E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 Gene3D G3DSA:3.40.190.10 162 259 2.7E-47 T 14-10-2018 BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 Gene3D G3DSA:3.40.190.10 85 283 2.7E-47 T 14-10-2018 BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 SUPERFAMILY SSF53850 81 286 2.58E-35 T 14-10-2018 BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 SUPERFAMILY SSF46785 2 72 2.65E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_14595 75c9cd15d34c585879b7ea70d0ec2171 289 Gene3D G3DSA:1.10.10.10 1 79 3.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 Gene3D G3DSA:3.20.20.70 48 293 1.3E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.7E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.403 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 Pfam PF04055 Radical SAM superfamily 91 252 1.2E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 SMART SM00729 84 293 3.9E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 SUPERFAMILY SSF102114 52 314 1.31E-67 T 14-10-2018 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.4E-149 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_07660 5c6eeb798b070d98c1e85cc2381de204 321 PIRSF PIRSF005963 1 320 1.5E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD94_11785 6d02cd564894ffaf064a058db942aea1 242 Gene3D G3DSA:3.90.1490.10 159 241 3.0E-7 T 14-10-2018 BJD94_11785 6d02cd564894ffaf064a058db942aea1 242 Pfam PF01902 Diphthamide synthase 19 226 3.5E-21 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 BJD94_11785 6d02cd564894ffaf064a058db942aea1 242 Gene3D G3DSA:3.40.50.620 14 158 2.4E-18 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_11785 6d02cd564894ffaf064a058db942aea1 242 SUPERFAMILY SSF52402 16 232 5.42E-55 T 14-10-2018 BJD94_06590 41267a9f02222478289a8191dcdaca53 100 Gene3D G3DSA:1.10.150.280 26 99 6.8E-22 T 14-10-2018 BJD94_06590 41267a9f02222478289a8191dcdaca53 100 SUPERFAMILY SSF47781 34 98 2.67E-25 T 14-10-2018 IPR010994 RuvA domain 2-like BJD94_06590 41267a9f02222478289a8191dcdaca53 100 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 38 99 5.1E-27 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BJD94_06590 41267a9f02222478289a8191dcdaca53 100 Pfam PF12836 Helix-hairpin-helix motif 38 98 1.2E-22 T 14-10-2018 BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 Gene3D G3DSA:1.20.58.220 119 228 1.2E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 Gene3D G3DSA:1.20.58.220 2 118 1.4E-39 T 14-10-2018 IPR038078 PhoU-like domain superfamily BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 PIRSF PIRSF003107 4 223 1.2E-68 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.2E-74 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 SUPERFAMILY SSF109755 10 226 1.36E-69 T 14-10-2018 BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 Pfam PF01895 PhoU domain 23 108 3.5E-21 T 14-10-2018 IPR026022 PhoU domain BJD94_08330 7d1fa2aa6adcdf9a328c18a097ebef02 232 Pfam PF01895 PhoU domain 128 210 3.1E-17 T 14-10-2018 IPR026022 PhoU domain BJD94_09080 84adb46f330130d5367bc436d729c106 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.5E-66 T 14-10-2018 IPR018445 Putative phosphate transport regulator BJD94_09080 84adb46f330130d5367bc436d729c106 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 225 2.7E-68 T 14-10-2018 IPR002727 Protein of unknown function DUF47 BJD94_09080 84adb46f330130d5367bc436d729c106 226 Gene3D G3DSA:1.20.58.220 1 225 9.2E-62 T 14-10-2018 IPR038078 PhoU-like domain superfamily BJD94_09080 84adb46f330130d5367bc436d729c106 226 SUPERFAMILY SSF109755 32 216 3.84E-15 T 14-10-2018 BJD94_13120 64a218efd1a7f8520f5e5523c6c3c5a7 229 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 6.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13120 64a218efd1a7f8520f5e5523c6c3c5a7 229 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13120 64a218efd1a7f8520f5e5523c6c3c5a7 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 Gene3D G3DSA:3.40.50.300 201 388 6.9E-52 T 14-10-2018 BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 134 142 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 388 46.926 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 SUPERFAMILY SSF52540 56 338 2.18E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 SMART SM00490 240 321 2.8E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 Pfam PF00270 DEAD/DEAH box helicase 7 175 7.7E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 Gene3D G3DSA:3.40.50.300 1 200 2.2E-64 T 14-10-2018 BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 Pfam PF00271 Helicase conserved C-terminal domain 214 321 4.3E-32 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_08680 599b091acdd6d2c7503fd260743e9e01 388 SMART SM00487 2 204 1.3E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:1.10.4050.10 9 112 8.8E-13 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:1.20.120.330 814 948 2.6E-42 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 807 2.0E-100 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 279 2.7E-92 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 SUPERFAMILY SSF81593 290 439 3.92E-43 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:3.30.460.100 564 813 4.6E-96 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 SUPERFAMILY SSF81593 817 945 2.28E-31 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:3.30.460.10 115 287 4.3E-66 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:1.20.120.1510 450 563 1.0E-32 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Pfam PF08335 GlnD PII-uridylyltransferase 828 915 5.7E-7 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Pfam PF08335 GlnD PII-uridylyltransferase 300 438 4.4E-45 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Gene3D G3DSA:1.20.120.330 288 443 1.7E-54 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 947 19.805 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 SUPERFAMILY SSF81301 527 817 3.92E-92 T 14-10-2018 BJD94_09060 4dc00d325bf3f1247c6217189f72cffd 950 SUPERFAMILY SSF81301 24 289 3.5E-87 T 14-10-2018 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 6.3E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 PIRSF PIRSF036618 1 592 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 SUPERFAMILY SSF52540 8 169 3.51E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:3.40.980.10 361 512 7.5E-134 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 SMART SM00852 366 503 5.4E-40 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 3.1E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:2.40.340.10 513 583 7.5E-134 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:3.90.105.10 213 360 7.5E-134 T 14-10-2018 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:3.40.50.300 10 165 1.9E-56 T 14-10-2018 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-32 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:2.170.190.11 236 327 7.5E-134 T 14-10-2018 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Pfam PF00994 Probable molybdopterin binding domain 366 502 4.0E-26 T 14-10-2018 IPR001453 MoaB/Mog domain BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 142 4.4E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 Gene3D G3DSA:2.20.25.120 53 85 1.9E-56 T 14-10-2018 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 SUPERFAMILY SSF63882 191 362 1.96E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 SUPERFAMILY SSF53218 363 508 2.88E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 166 8.3E-44 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BJD94_03810 185e64b1e476298d4f245cbfab17b0bc 592 SUPERFAMILY SSF63867 512 590 1.18E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_05510 a7dc8d61c6c2485ab0a06907edaa0bf2 198 SUPERFAMILY SSF89392 20 197 2.94E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD94_05510 a7dc8d61c6c2485ab0a06907edaa0bf2 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 185 2.4E-55 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BJD94_05510 a7dc8d61c6c2485ab0a06907edaa0bf2 198 Gene3D G3DSA:2.50.20.10 16 197 4.3E-47 T 14-10-2018 BJD94_05510 a7dc8d61c6c2485ab0a06907edaa0bf2 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.355 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BJD94_05510 a7dc8d61c6c2485ab0a06907edaa0bf2 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 197 5.0E-64 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 8.9E-27 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 SUPERFAMILY SSF46548 2 155 4.18E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.1E-23 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.1E-23 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.1E-23 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.1E-23 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Gene3D G3DSA:3.50.50.60 411 476 6.3E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 SUPERFAMILY SSF51971 143 407 3.59E-66 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Gene3D G3DSA:1.10.1060.10 9 143 2.9E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Gene3D G3DSA:3.40.50.720 144 251 1.3E-14 T 14-10-2018 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Gene3D G3DSA:3.50.50.60 252 406 2.0E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.5E-199 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 BJD94_08780 4eea0b780c9f41c0d3c995e46f65b262 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.7E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 Pfam PF08487 Vault protein inter-alpha-trypsin domain 48 158 2.2E-26 T 14-10-2018 IPR013694 VIT domain BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 SMART SM00609 32 160 2.2E-6 T 14-10-2018 IPR013694 VIT domain BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 SUPERFAMILY SSF53300 307 476 3.2E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 Gene3D G3DSA:3.40.50.410 309 479 1.3E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 SMART SM00327 308 481 7.3E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_16475 6e6d7bd207b2a0659eeeb9f5efd7a934 688 Pfam PF13768 von Willebrand factor type A domain 312 460 4.7E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_09970 eeeedf59bd843b62bbed59fab4cc8348 380 Pfam PF14897 EpsG family 29 346 2.4E-39 T 14-10-2018 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Gene3D G3DSA:3.40.640.10 95 353 8.4E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Gene3D G3DSA:3.40.640.10 522 747 2.7E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 SUPERFAMILY SSF53383 17 438 1.76E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 SUPERFAMILY SSF53383 454 947 3.93E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 2.8E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 7.0E-179 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Gene3D G3DSA:3.90.1150.10 760 896 1.1E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_21120 1207c13c9fd36ac8c0f5f3d9b69a885b 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.567 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 SUPERFAMILY SSF53850 95 299 6.21E-37 T 14-10-2018 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 Gene3D G3DSA:3.40.190.10 98 297 3.2E-57 T 14-10-2018 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 Gene3D G3DSA:1.10.10.10 9 95 3.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 SUPERFAMILY SSF46785 11 91 4.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 Gene3D G3DSA:3.40.190.10 169 270 3.2E-57 T 14-10-2018 BJD94_19335 d30316639726003dadaba3c2f1d5f185 303 Pfam PF03466 LysR substrate binding domain 94 298 6.4E-37 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 SUPERFAMILY SSF111369 67 281 1.27E-28 T 14-10-2018 BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 Gene3D G3DSA:2.40.50.100 77 205 7.6E-50 T 14-10-2018 BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 Gene3D G3DSA:2.40.420.20 286 352 7.6E-50 T 14-10-2018 BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 354 3.4E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 8.0E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 Gene3D G3DSA:2.40.30.170 66 285 7.6E-50 T 14-10-2018 BJD94_14225 6ca45e5f2a3eda43f8f16d5bae187f84 364 Gene3D G3DSA:1.10.287.470 112 171 7.6E-50 T 14-10-2018 BJD94_02225 6d9fcc05bce398ebbd647b118c500290 401 Pfam PF13439 Glycosyltransferase Family 4 14 219 1.0E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_02225 6d9fcc05bce398ebbd647b118c500290 401 Pfam PF00534 Glycosyl transferases group 1 228 377 1.1E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_02225 6d9fcc05bce398ebbd647b118c500290 401 SUPERFAMILY SSF53756 1 399 1.61E-71 T 14-10-2018 BJD94_02225 6d9fcc05bce398ebbd647b118c500290 401 Gene3D G3DSA:3.40.50.2000 227 380 1.7E-35 T 14-10-2018 BJD94_07330 dcd1cdfc1ec329126fcf60092cd76d80 141 SUPERFAMILY SSF140566 1 113 3.14E-20 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BJD94_07330 dcd1cdfc1ec329126fcf60092cd76d80 141 Pfam PF05130 FlgN protein 2 131 5.4E-25 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 SUPERFAMILY SSF52402 26 213 3.81E-55 T 14-10-2018 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.273 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 39 248 9.0E-86 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 PIRSF PIRSF000857 4 253 3.7E-57 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 Gene3D G3DSA:3.40.50.620 7 221 3.1E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 2.5E-91 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 BJD94_12920 64130551db2ef2ba4ff4bfc7fdce232c 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 224 1.9E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 Gene3D G3DSA:2.40.50.140 4 67 1.3E-28 T 14-10-2018 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 SMART SM00357 6 69 1.5E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 PIRSF PIRSF002599 1 69 3.3E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 PRINTS PR00050 Cold shock protein signature 42 60 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 PRINTS PR00050 Cold shock protein signature 27 36 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 7.5E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15555 5c5d3e5b0b1eee0016bb22ba9befcb0d 69 SUPERFAMILY SSF50249 3 68 1.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Pfam PF10462 Peptidase M66 352 657 3.0E-94 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Gene3D G3DSA:2.60.40.10 164 255 5.4E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 8.7E-55 T 14-10-2018 IPR022218 ToxR activated gene A lipoprotein BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Gene3D G3DSA:3.30.160.280 1184 1245 9.9E-14 T 14-10-2018 BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Gene3D G3DSA:3.30.160.280 1101 1171 9.4E-6 T 14-10-2018 BJD94_16770 86f37b8142bd1ee4c0eb12805c967d98 1245 Gene3D G3DSA:3.30.160.280 1010 1077 3.3E-14 T 14-10-2018 BJD94_04630 91f0b766996ae426d7c0c7ec5e5d8df5 235 Gene3D G3DSA:3.20.20.190 1 235 6.1E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD94_04630 91f0b766996ae426d7c0c7ec5e5d8df5 235 SUPERFAMILY SSF51695 3 234 1.38E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD94_04630 91f0b766996ae426d7c0c7ec5e5d8df5 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 2.6E-36 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 Gene3D G3DSA:3.40.600.10 2 221 8.3E-55 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 4 219 5.8E-100 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 SMART SM00927 53 151 1.2E-63 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 227 149.112 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 6.5E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 BJD94_08615 fde850680a233cbc53d4dc69900d438e 227 SUPERFAMILY SSF52980 2 220 1.23E-82 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 84 95 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 PIRSF PIRSF039102 1 331 5.1E-79 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 331 32.525 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Gene3D G3DSA:3.40.50.20 18 327 1.8E-79 T 14-10-2018 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Pfam PF07478 D-ala D-ala ligase C-terminus 127 327 1.6E-55 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 329 9.6E-100 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Gene3D G3DSA:3.30.470.20 106 321 1.8E-79 T 14-10-2018 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 SUPERFAMILY SSF56059 117 328 1.79E-44 T 14-10-2018 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Gene3D G3DSA:3.30.1490.20 133 200 1.8E-79 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 Pfam PF01820 D-ala D-ala ligase N-terminus 4 107 5.9E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 273 301 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD94_21530 af0962ef5e4a3a1e0dbb0bebfd0e9be6 331 SUPERFAMILY SSF52440 4 116 1.44E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD94_10000 943711667c8bc514194a9feae902da2b 727 Pfam PF02706 Chain length determinant protein 19 112 7.6E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BJD94_10000 943711667c8bc514194a9feae902da2b 727 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 717 3.8E-51 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BJD94_10000 943711667c8bc514194a9feae902da2b 727 Pfam PF13614 AAA domain 543 656 1.7E-11 T 14-10-2018 IPR025669 AAA domain BJD94_10000 943711667c8bc514194a9feae902da2b 727 Gene3D G3DSA:3.40.50.300 449 726 1.6E-77 T 14-10-2018 BJD94_10000 943711667c8bc514194a9feae902da2b 727 SUPERFAMILY SSF52540 528 723 5.19E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10000 943711667c8bc514194a9feae902da2b 727 Pfam PF13807 G-rich domain on putative tyrosine kinase 375 455 1.2E-34 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain BJD94_03820 7015267d5c6c7bff131dc4a9d265aedf 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_03820 7015267d5c6c7bff131dc4a9d265aedf 239 Pfam PF00005 ABC transporter 25 165 5.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_03820 7015267d5c6c7bff131dc4a9d265aedf 239 SMART SM00382 29 213 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_03820 7015267d5c6c7bff131dc4a9d265aedf 239 SUPERFAMILY SSF52540 5 217 9.06E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03820 7015267d5c6c7bff131dc4a9d265aedf 239 Gene3D G3DSA:3.40.50.300 4 235 2.0E-53 T 14-10-2018 BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 3.3E-145 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 Gene3D G3DSA:1.10.443.10 98 310 5.6E-71 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 Gene3D G3DSA:1.10.150.130 1 94 2.5E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 SUPERFAMILY SSF56349 100 315 5.89E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 Pfam PF00589 Phage integrase family 105 306 9.1E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD94_02655 68cc3c88f91d27eb7e9067f17ad99258 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 1.0E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 SUPERFAMILY SSF52540 357 592 9.02E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 Gene3D G3DSA:1.20.1560.10 11 340 1.0E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 SUPERFAMILY SSF90123 12 345 2.49E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 Pfam PF00664 ABC transporter transmembrane region 30 312 2.9E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 SMART SM00382 385 572 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 Gene3D G3DSA:3.40.50.300 353 599 1.1E-81 T 14-10-2018 BJD94_04145 3c4f684caf1a4e92d5979e85276f475c 599 Pfam PF00005 ABC transporter 376 524 3.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 2.7E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 PIRSF PIRSF038996 1 174 2.0E-64 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 Pfam PF00258 Flavodoxin 6 162 1.2E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 SUPERFAMILY SSF52218 4 173 1.47E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_07045 22783c04f8856ed67c4e723b4c423fb0 177 Gene3D G3DSA:3.40.50.360 3 177 4.0E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_07430 9d674f40bcc3fb6124fb251620828014 159 SUPERFAMILY SSF55826 2 156 2.88E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_07430 9d674f40bcc3fb6124fb251620828014 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 5.8E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BJD94_07430 9d674f40bcc3fb6124fb251620828014 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.4E-60 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BJD94_07430 9d674f40bcc3fb6124fb251620828014 159 PIRSF PIRSF006181 1 159 1.7E-53 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BJD94_07430 9d674f40bcc3fb6124fb251620828014 159 Gene3D G3DSA:3.90.960.10 1 157 3.3E-58 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 Gene3D G3DSA:3.30.930.10 1 313 1.8E-115 T 14-10-2018 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 SUPERFAMILY SSF52954 317 412 1.64E-26 T 14-10-2018 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 PIRSF PIRSF001549 1 412 1.4E-123 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 SUPERFAMILY SSF55681 1 310 1.15E-102 T 14-10-2018 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 Pfam PF13393 Histidyl-tRNA synthetase 1 302 1.7E-43 T 14-10-2018 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 410 31.647 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 399 1.8E-154 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 Pfam PF03129 Anticodon binding domain 319 410 8.5E-11 T 14-10-2018 IPR004154 Anticodon-binding BJD94_08175 24de91b2c5689a8f44b5cc52eeaaf1f8 412 Gene3D G3DSA:3.40.50.800 316 412 1.5E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BJD94_07415 004def25b25bb2da96456de340befce0 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 5.8E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_07415 004def25b25bb2da96456de340befce0 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 2.0E-47 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_07415 004def25b25bb2da96456de340befce0 347 SUPERFAMILY SSF55174 7 95 1.5E-14 T 14-10-2018 BJD94_07415 004def25b25bb2da96456de340befce0 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD94_07415 004def25b25bb2da96456de340befce0 347 Pfam PF01479 S4 domain 8 52 7.4E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_07415 004def25b25bb2da96456de340befce0 347 Gene3D G3DSA:3.10.290.10 1 61 6.4E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD94_07415 004def25b25bb2da96456de340befce0 347 SMART SM00363 7 65 4.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_07415 004def25b25bb2da96456de340befce0 347 Gene3D G3DSA:3.30.70.580 68 227 1.1E-53 T 14-10-2018 BJD94_07415 004def25b25bb2da96456de340befce0 347 SUPERFAMILY SSF55120 66 227 2.33E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_07415 004def25b25bb2da96456de340befce0 347 Gene3D G3DSA:3.30.70.1560 132 205 1.1E-53 T 14-10-2018 BJD94_07785 6f3e85a5347a22ff1cf2c1e675ac0971 208 Pfam PF12697 Alpha/beta hydrolase family 16 132 8.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07785 6f3e85a5347a22ff1cf2c1e675ac0971 208 SUPERFAMILY SSF53474 9 179 1.11E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_07785 6f3e85a5347a22ff1cf2c1e675ac0971 208 Gene3D G3DSA:3.40.50.1820 14 199 5.3E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 SUPERFAMILY SSF88688 284 374 7.19E-6 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 SMART SM00872 278 356 5.0E-13 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 SUPERFAMILY SSF74650 376 884 2.98E-69 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 SUPERFAMILY SSF88713 5 271 2.3E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Gene3D G3DSA:1.20.1270.50 282 381 2.9E-26 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Gene3D G3DSA:3.20.110.10 1 275 3.7E-99 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 386 880 4.5E-34 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 265 1.2E-36 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Pfam PF09261 Alpha mannosidase middle domain 279 356 1.6E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BJD94_18720 29fe74ea72876b90832241e1a2f189f9 884 Gene3D G3DSA:2.70.98.30 486 773 9.4E-75 T 14-10-2018 BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SUPERFAMILY SSF52540 106 496 1.4E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 496 8.9E-229 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SMART SM00382 252 375 2.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Pfam PF00437 Type II/IV secretion system protein 126 391 4.4E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 SUPERFAMILY SSF160246 12 78 9.94E-17 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Gene3D G3DSA:3.40.50.300 226 499 6.1E-132 T 14-10-2018 BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Gene3D G3DSA:3.30.450.90 89 224 4.5E-54 T 14-10-2018 BJD94_10475 8bc5a9ddfd7368e428e6fa5129c64ad2 499 Gene3D G3DSA:3.30.300.160 1 78 2.9E-39 T 14-10-2018 BJD94_20305 38f9ad81851279df85a3f09087d5557c 154 Pfam PF04224 Protein of unknown function, DUF417 9 146 2.1E-42 T 14-10-2018 IPR007339 Inner membrane protein RclC-like BJD94_20305 38f9ad81851279df85a3f09087d5557c 154 PIRSF PIRSF028065 1 149 5.5E-82 T 14-10-2018 IPR016865 Inner membrane protein RclC BJD94_00985 0fdd5e8243ad1d2681171ba9f0b26a9e 308 Gene3D G3DSA:3.40.50.11550 40 261 3.1E-26 T 14-10-2018 BJD94_00985 0fdd5e8243ad1d2681171ba9f0b26a9e 308 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 49 248 4.1E-58 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN BJD94_00985 0fdd5e8243ad1d2681171ba9f0b26a9e 308 Gene3D G3DSA:1.10.8.760 148 212 3.1E-26 T 14-10-2018 BJD94_00985 0fdd5e8243ad1d2681171ba9f0b26a9e 308 SUPERFAMILY SSF159501 28 277 4.06E-72 T 14-10-2018 BJD94_00985 0fdd5e8243ad1d2681171ba9f0b26a9e 308 PIRSF PIRSF020419 1 292 2.6E-74 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 SUPERFAMILY SSF52518 4 191 2.14E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 Gene3D G3DSA:3.40.50.920 198 324 1.9E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 9.1E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 3.3E-49 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 SMART SM00861 4 179 1.1E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 Gene3D G3DSA:3.40.50.970 1 192 1.7E-75 T 14-10-2018 BJD94_15315 741d9c64e022cad2321d7f0813d939d6 327 SUPERFAMILY SSF52922 190 323 1.44E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD94_00525 5fcd86b143ab3534a6fcb097d1b1eb94 158 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 8.8E-55 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 BJD94_19835 cf45db96fc84d3d24cf7ff4a6bdfcf38 305 Gene3D G3DSA:3.40.630.10 4 305 5.2E-111 T 14-10-2018 BJD94_19835 cf45db96fc84d3d24cf7ff4a6bdfcf38 305 SUPERFAMILY SSF53187 38 288 4.3E-35 T 14-10-2018 BJD94_19835 cf45db96fc84d3d24cf7ff4a6bdfcf38 305 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 7.6E-7 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Pfam PF00005 ABC transporter 19 185 9.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 SMART SM00382 344 514 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04090 697df8256acf42f19e78c91f0958289d 639 SMART SM00382 28 230 2.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Pfam PF12848 ABC transporter 224 296 7.7E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 7.5E-21 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 SUPERFAMILY SSF52540 4 238 2.71E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04090 697df8256acf42f19e78c91f0958289d 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Gene3D G3DSA:1.10.287.380 555 638 2.7E-28 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 SUPERFAMILY SSF52540 312 523 7.27E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Pfam PF00005 ABC transporter 336 469 1.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Gene3D G3DSA:3.40.50.300 281 551 2.6E-67 T 14-10-2018 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 Gene3D G3DSA:3.40.50.300 7 279 1.7E-66 T 14-10-2018 BJD94_04090 697df8256acf42f19e78c91f0958289d 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_02730 0645e9da8548e61b1f6f2f5069a520f5 173 Gene3D G3DSA:3.40.630.30 1 156 4.7E-23 T 14-10-2018 BJD94_02730 0645e9da8548e61b1f6f2f5069a520f5 173 Pfam PF13527 Acetyltransferase (GNAT) domain 14 125 4.9E-9 T 14-10-2018 BJD94_02730 0645e9da8548e61b1f6f2f5069a520f5 173 SUPERFAMILY SSF55729 13 127 8.61E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 Gene3D G3DSA:3.40.50.300 145 310 2.8E-35 T 14-10-2018 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 SUPERFAMILY SSF52540 146 379 9.52E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 Pfam PF00158 Sigma-54 interaction domain 146 305 7.6E-34 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 SUPERFAMILY SSF46689 351 438 2.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 Gene3D G3DSA:1.10.10.60 387 440 9.5E-13 T 14-10-2018 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 Gene3D G3DSA:1.10.8.60 312 382 2.7E-23 T 14-10-2018 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 5.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_08635 10cd68fbef92f6ec221d16b2f5529ea8 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD94_00095 922d5beb07596442bbece8fb3c1a53cd 198 PIRSF PIRSF006102 1 198 1.2E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_00095 922d5beb07596442bbece8fb3c1a53cd 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.873 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BJD94_00095 922d5beb07596442bbece8fb3c1a53cd 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.3E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 BJD94_00095 922d5beb07596442bbece8fb3c1a53cd 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 2.0E-107 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 BJD94_10590 6bf0c650154f73a6f0c636667e81e4ca 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 27.303 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BJD94_10590 6bf0c650154f73a6f0c636667e81e4ca 220 SUPERFAMILY SSF52540 19 204 1.53E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10590 6bf0c650154f73a6f0c636667e81e4ca 220 Gene3D G3DSA:3.40.50.300 6 208 3.5E-57 T 14-10-2018 BJD94_10590 6bf0c650154f73a6f0c636667e81e4ca 220 Pfam PF01926 50S ribosome-binding GTPase 33 151 1.2E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_10590 6bf0c650154f73a6f0c636667e81e4ca 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 15 198 6.9E-73 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BJD94_08925 0b20400c9cba5147cab031809decd767 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.353 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD94_08925 0b20400c9cba5147cab031809decd767 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 103 3.4E-27 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD94_08925 0b20400c9cba5147cab031809decd767 105 Pfam PF04999 Cell division protein FtsL 8 103 1.3E-36 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD94_08185 4ef29b0bc968f08aac559e2cdd38b6a3 320 SUPERFAMILY SSF47413 17 93 1.87E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_08185 4ef29b0bc968f08aac559e2cdd38b6a3 320 Pfam PF13413 Helix-turn-helix domain 25 83 1.7E-18 T 14-10-2018 BJD94_08185 4ef29b0bc968f08aac559e2cdd38b6a3 320 Gene3D G3DSA:1.10.260.40 11 120 1.2E-23 T 14-10-2018 BJD94_08185 4ef29b0bc968f08aac559e2cdd38b6a3 320 Pfam PF13464 Domain of unknown function (DUF4115) 245 318 4.0E-23 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 Gene3D G3DSA:1.20.5.1030 67 123 5.1E-17 T 14-10-2018 IPR038379 SecE superfamily BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 1.5E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 3.2E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD94_11925 114de7c9edc3e7d440f0c1d6396f4ca9 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.517 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Gene3D G3DSA:3.40.30.10 2 111 2.1E-21 T 14-10-2018 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 SUPERFAMILY SSF52833 4 111 4.37E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Gene3D G3DSA:1.25.40.10 197 284 1.0E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Pfam PF00085 Thioredoxin 7 109 2.7E-13 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Pfam PF14559 Tetratricopeptide repeat 124 190 5.3E-11 T 14-10-2018 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Gene3D G3DSA:1.25.40.10 112 196 3.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07175 f31bca85f769745923217bc0b3e07b83 284 Pfam PF14561 Tetratricopeptide repeat 195 284 7.2E-26 T 14-10-2018 BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 Gene3D G3DSA:3.90.76.10 57 165 1.4E-122 T 14-10-2018 BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 PIRSF PIRSF002741 20 502 9.0E-93 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 Gene3D G3DSA:3.10.105.10 279 494 1.4E-122 T 14-10-2018 BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 7.8E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 Gene3D G3DSA:3.40.190.10 32 278 1.4E-122 T 14-10-2018 BJD94_11385 af5f09f1b3559dc7f8448cfabfcd23fb 518 SUPERFAMILY SSF53850 26 516 1.24E-127 T 14-10-2018 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 SMART SM00382 45 228 8.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 Pfam PF08402 TOBE domain 295 374 1.3E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 Pfam PF00005 ABC transporter 38 177 3.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 Gene3D G3DSA:2.40.50.940 239 301 6.1E-11 T 14-10-2018 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 SUPERFAMILY SSF50331 253 374 4.7E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 Gene3D G3DSA:3.40.50.300 20 238 8.2E-69 T 14-10-2018 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 Gene3D G3DSA:2.40.50.140 302 323 6.1E-11 T 14-10-2018 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 51 374 1.7E-155 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_03960 07e5e6493d514ed59a7ccb2c39fc281f 380 SUPERFAMILY SSF52540 21 258 4.91E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13640 6594970be7b449d012b04d3d69294d01 324 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 318 43.092 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 BJD94_13640 6594970be7b449d012b04d3d69294d01 324 Gene3D G3DSA:3.30.70.1630 26 189 3.5E-42 T 14-10-2018 BJD94_13640 6594970be7b449d012b04d3d69294d01 324 Gene3D G3DSA:2.40.30.160 193 313 1.1E-32 T 14-10-2018 BJD94_13640 6594970be7b449d012b04d3d69294d01 324 SUPERFAMILY SSF103025 17 237 4.55E-56 T 14-10-2018 BJD94_13640 6594970be7b449d012b04d3d69294d01 324 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 153 2.7E-7 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BJD94_13640 6594970be7b449d012b04d3d69294d01 324 SUPERFAMILY SSF101790 239 322 2.81E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BJD94_13640 6594970be7b449d012b04d3d69294d01 324 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 183 247 1.3E-23 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site BJD94_13640 6594970be7b449d012b04d3d69294d01 324 Gene3D G3DSA:3.30.70.1400 29 115 3.5E-42 T 14-10-2018 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 SMART SM00411 1 90 3.7E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 SUPERFAMILY SSF47729 1 90 2.06E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_12010 cb962fcecd337369870c2eec928d65ee 90 Gene3D G3DSA:4.10.520.10 1 90 2.2E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_04075 19c7678048ed505b437e504a8907d8b4 172 Pfam PF07977 FabA-like domain 29 158 2.8E-54 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04075 19c7678048ed505b437e504a8907d8b4 172 SUPERFAMILY SSF54637 4 169 1.31E-56 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_04075 19c7678048ed505b437e504a8907d8b4 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.736 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04075 19c7678048ed505b437e504a8907d8b4 172 Gene3D G3DSA:3.10.129.10 2 172 1.8E-66 T 14-10-2018 BJD94_04075 19c7678048ed505b437e504a8907d8b4 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.2E-93 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD94_04020 4e59b50b824b17ca0b2e00f19c3cf5bb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 6.0E-12 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component BJD94_19160 5044134ce9c8dfbf8447a6e370bd49c3 198 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 197 1.4E-62 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 BJD94_19160 5044134ce9c8dfbf8447a6e370bd49c3 198 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.199 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 BJD94_19160 5044134ce9c8dfbf8447a6e370bd49c3 198 Gene3D G3DSA:3.40.1280.10 1 198 9.0E-57 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_19160 5044134ce9c8dfbf8447a6e370bd49c3 198 SUPERFAMILY SSF75217 1 197 2.22E-63 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 PIRSF PIRSF006078 1 377 2.8E-139 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 Gene3D G3DSA:3.90.1510.10 42 276 8.0E-141 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 SUPERFAMILY SSF110738 1 375 4.58E-143 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 Gene3D G3DSA:3.40.50.10350 2 361 8.0E-141 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 Pfam PF02595 Glycerate kinase family 3 372 7.9E-149 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_14105 a9412019ae0b9e948424f1e687b23f5f 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 7.9E-161 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82693 41 133 2.17E-22 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82866 289 490 2.35E-41 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.2090.10 703 791 2.6E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.70.1430 565 651 2.6E-258 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82693 146 325 3.5E-13 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:1.20.1640.10 510 1018 2.6E-258 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Pfam PF00873 AcrB/AcrD/AcrF family 9 1021 2.5E-169 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.2090.10 178 268 2.6E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.70.1440 652 849 2.6E-258 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82866 787 1023 2.62E-49 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.70.1430 41 799 2.6E-258 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82714 184 263 1.18E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 SUPERFAMILY SSF82714 706 788 4.05E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:3.30.70.1320 135 327 2.6E-258 T 14-10-2018 BJD94_14230 cc714837878921f26f6d825ca06b0b11 1060 Gene3D G3DSA:1.20.1640.10 12 509 2.6E-258 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 644 3.1E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 482 2.3E-14 T 14-10-2018 IPR000014 PAS domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 642 1.6E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Gene3D G3DSA:3.30.450.20 358 479 9.9E-16 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SUPERFAMILY SSF158472 181 227 5.1E-6 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Gene3D G3DSA:1.20.1480.50 136 238 1.6E-5 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Gene3D G3DSA:3.30.70.270 480 649 4.5E-54 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SMART SM00091 246 312 3.6 T 14-10-2018 IPR000014 PAS domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SMART SM00091 361 427 1.9E-10 T 14-10-2018 IPR000014 PAS domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SMART SM00304 179 232 1.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Pfam PF17152 Periplasmic sensor domain 44 139 1.5E-8 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Gene3D G3DSA:3.30.450.20 242 350 1.9E-8 T 14-10-2018 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SMART SM00267 476 647 2.5E-57 T 14-10-2018 IPR000160 GGDEF domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SUPERFAMILY SSF55785 233 341 2.09E-5 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Pfam PF00989 PAS fold 366 410 3.7E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SUPERFAMILY SSF55785 349 451 1.96E-15 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_21505 54423db985e42591b37031c9d7340bd1 662 Pfam PF13426 PAS domain 258 352 0.0029 T 14-10-2018 IPR000014 PAS domain BJD94_21505 54423db985e42591b37031c9d7340bd1 662 SUPERFAMILY SSF55073 492 646 4.47E-45 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Gene3D G3DSA:3.30.70.80 37 125 6.9E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Pfam PF02225 PA domain 374 465 3.2E-5 T 14-10-2018 IPR003137 PA domain BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 SUPERFAMILY SSF49785 565 673 2.51E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Pfam PF01483 Proprotein convertase P-domain 595 673 3.7E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Pfam PF00082 Subtilase family 146 345 1.2E-27 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 SUPERFAMILY SSF52743 123 548 2.58E-102 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Pfam PF05922 Peptidase inhibitor I9 43 120 7.6E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Gene3D G3DSA:2.60.120.260 561 674 1.0E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 SUPERFAMILY SSF54897 41 119 5.53E-6 T 14-10-2018 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Gene3D G3DSA:3.40.50.200 144 545 3.2E-157 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Gene3D G3DSA:3.50.30.30 335 480 3.2E-157 T 14-10-2018 BJD94_19350 546c2c5e9db04ebe3c684e7814ca2b57 674 Pfam PF00082 Subtilase family 476 538 5.6E-13 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD94_08480 7a5e6576748d972047bec4f89e627a6a 124 Pfam PF07238 PilZ domain 3 100 3.6E-15 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_08480 7a5e6576748d972047bec4f89e627a6a 124 Gene3D G3DSA:2.40.10.220 1 123 1.3E-31 T 14-10-2018 BJD94_08480 7a5e6576748d972047bec4f89e627a6a 124 PIRSF PIRSF028141 1 120 7.2E-43 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type BJD94_08480 7a5e6576748d972047bec4f89e627a6a 124 SUPERFAMILY SSF141371 1 120 9.22E-33 T 14-10-2018 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 224 235 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 SUPERFAMILY SSF50494 9 278 6.85E-70 T 14-10-2018 IPR009003 Peptidase S1, PA clan BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 Gene3D G3DSA:2.60.40.10 279 376 1.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 82 87 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 Pfam PF00089 Trypsin 41 273 9.3E-60 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 SMART SM00020 40 273 8.6E-78 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 523 541 1.5E-4 T 14-10-2018 IPR020008 GlyGly-CTERM domain BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 Gene3D G3DSA:2.40.10.10 33 278 1.1E-68 T 14-10-2018 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 1.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 72 87 1.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_02590 8084f63b16fb813d69ef80c2c78bb5a1 543 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 223 235 1.9E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 BJD94_18195 db72a25ce4afad62b0aff75030fbf8bf 926 Gene3D G3DSA:1.50.10.10 418 764 8.2E-44 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD94_18195 db72a25ce4afad62b0aff75030fbf8bf 926 Pfam PF06202 Amylo-alpha-1,6-glucosidase 400 765 1.6E-118 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 BJD94_18195 db72a25ce4afad62b0aff75030fbf8bf 926 SUPERFAMILY SSF48208 365 844 6.24E-67 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_19145 909d859bd44421e60ec11b460d0f7770 147 SUPERFAMILY SSF46689 2 74 1.64E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19145 909d859bd44421e60ec11b460d0f7770 147 Gene3D G3DSA:1.10.357.10 1 144 5.7E-35 T 14-10-2018 BJD94_19145 909d859bd44421e60ec11b460d0f7770 147 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_19145 909d859bd44421e60ec11b460d0f7770 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_19145 909d859bd44421e60ec11b460d0f7770 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_06290 e66c7bd15538eca26e95c8c7200392d0 160 Gene3D G3DSA:2.60.120.370 7 158 1.6E-35 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily BJD94_06290 e66c7bd15538eca26e95c8c7200392d0 160 SUPERFAMILY SSF51197 8 156 3.57E-37 T 14-10-2018 BJD94_06290 e66c7bd15538eca26e95c8c7200392d0 160 Pfam PF04074 Domain of unknown function (DUF386) 9 155 1.4E-37 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family BJD94_06290 e66c7bd15538eca26e95c8c7200392d0 160 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 7 156 2.2E-36 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 SMART SM00257 39 83 6.3E-5 T 14-10-2018 IPR018392 LysM domain BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 2.1E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 Gene3D G3DSA:2.40.440.10 19 298 2.7E-82 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 SUPERFAMILY SSF54106 38 83 1.96E-7 T 14-10-2018 BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 SUPERFAMILY SSF141523 95 230 1.83E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD94_19585 76b7f3e7d3b435d62cd2a0979120927e 303 Pfam PF01476 LysM domain 40 83 4.4E-8 T 14-10-2018 IPR018392 LysM domain BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 Gene3D G3DSA:3.40.50.2300 123 178 1.4E-7 T 14-10-2018 BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 SUPERFAMILY SSF52172 128 177 2.85E-8 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 Gene3D G3DSA:3.40.50.12740 6 122 2.8E-30 T 14-10-2018 BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 SUPERFAMILY SSF52172 4 119 1.85E-27 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 SMART SM00448 6 116 6.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 Pfam PF00072 Response regulator receiver domain 131 177 1.8E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_14875 7d57caae53d3f89a1d3c3bfbba2187db 183 Pfam PF00072 Response regulator receiver domain 9 115 1.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_02250 8a05fafaad7e5d8c67cae267ba7ce6ed 327 Pfam PF09084 NMT1/THI5 like 47 255 2.2E-18 T 14-10-2018 IPR015168 SsuA/THI5-like BJD94_02250 8a05fafaad7e5d8c67cae267ba7ce6ed 327 Gene3D G3DSA:3.40.190.10 208 327 3.6E-9 T 14-10-2018 BJD94_02250 8a05fafaad7e5d8c67cae267ba7ce6ed 327 Gene3D G3DSA:3.40.190.10 32 126 4.4E-5 T 14-10-2018 BJD94_02250 8a05fafaad7e5d8c67cae267ba7ce6ed 327 Gene3D G3DSA:3.40.190.10 127 207 5.9E-10 T 14-10-2018 BJD94_02250 8a05fafaad7e5d8c67cae267ba7ce6ed 327 SUPERFAMILY SSF53850 36 261 2.59E-27 T 14-10-2018 BJD94_04470 3b26049570d58bb8f73254de3a770a2b 421 SUPERFAMILY SSF56954 10 415 2.88E-87 T 14-10-2018 BJD94_04470 3b26049570d58bb8f73254de3a770a2b 421 Gene3D G3DSA:1.20.1600.10 9 412 4.8E-80 T 14-10-2018 BJD94_04470 3b26049570d58bb8f73254de3a770a2b 421 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 9 415 1.1E-120 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BJD94_04470 3b26049570d58bb8f73254de3a770a2b 421 Pfam PF02321 Outer membrane efflux protein 217 401 3.7E-30 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_04470 3b26049570d58bb8f73254de3a770a2b 421 Pfam PF02321 Outer membrane efflux protein 11 195 1.2E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_18615 a3cc07676dfe8818b273833210286b0d 421 Pfam PF13289 SIR2-like domain 201 347 1.7E-12 T 14-10-2018 IPR039444 SIR2-like domain BJD94_21360 144fcb5b062e549043c8f90dcb83b490 298 SUPERFAMILY SSF103481 47 145 8.5E-17 T 14-10-2018 BJD94_21360 144fcb5b062e549043c8f90dcb83b490 298 Pfam PF00892 EamA-like transporter family 161 287 1.2E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_21360 144fcb5b062e549043c8f90dcb83b490 298 Pfam PF00892 EamA-like transporter family 12 142 6.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_21360 144fcb5b062e549043c8f90dcb83b490 298 SUPERFAMILY SSF103481 194 291 3.79E-14 T 14-10-2018 BJD94_01410 70cf89cc540939927046c599a9ebd292 240 Gene3D G3DSA:1.10.10.2260 88 194 3.9E-49 T 14-10-2018 BJD94_01410 70cf89cc540939927046c599a9ebd292 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 237 51.441 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BJD94_01410 70cf89cc540939927046c599a9ebd292 240 Gene3D G3DSA:1.10.10.2250 1 78 1.2E-35 T 14-10-2018 BJD94_01410 70cf89cc540939927046c599a9ebd292 240 Pfam PF04288 MukE-like family 10 234 2.1E-118 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 BJD94_05255 24116e2df9dee1d292a5059741066b12 305 SUPERFAMILY SSF52540 13 275 6.83E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05255 24116e2df9dee1d292a5059741066b12 305 Gene3D G3DSA:3.40.50.300 2 298 2.3E-29 T 14-10-2018 BJD94_05255 24116e2df9dee1d292a5059741066b12 305 Pfam PF13469 Sulfotransferase family 15 263 8.5E-15 T 14-10-2018 BJD94_01920 27b6759ca25f6080b599457850b88beb 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site BJD94_01920 27b6759ca25f6080b599457850b88beb 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 2.6E-135 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD94_01920 27b6759ca25f6080b599457850b88beb 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.2E-173 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 1.5E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 SUPERFAMILY SSF52833 2 184 3.81E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 Gene3D G3DSA:3.40.30.10 1 184 6.8E-61 T 14-10-2018 BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 PIRSF PIRSF000239 1 185 4.7E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 Pfam PF00578 AhpC/TSA family 7 131 1.4E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_15460 70ea54ce9e44324a231e6a952a05593f 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 4.2E-104 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD94_01305 0bd5ea38543ca96da78d256df0706480 106 Gene3D G3DSA:3.30.1390.10 1 106 6.3E-45 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD94_01305 0bd5ea38543ca96da78d256df0706480 106 SUPERFAMILY SSF54736 21 105 6.8E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD94_01305 0bd5ea38543ca96da78d256df0706480 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 3.7E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 BJD94_01305 0bd5ea38543ca96da78d256df0706480 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.258 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 SUPERFAMILY SSF58104 230 535 6.54E-72 T 14-10-2018 BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 SMART SM00304 205 258 8.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 Gene3D G3DSA:1.10.287.950 204 536 3.4E-71 T 14-10-2018 BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 SMART SM00283 273 534 5.8E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 501 3.1E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_05140 25278241264f94381ad86b0a1aab25fa 536 Pfam PF00672 HAMP domain 206 254 2.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_13160 317e3cdf08f1ae9007e68afff23b374e 1283 Pfam PF13502 AsmA-like C-terminal region 1020 1260 1.3E-57 T 14-10-2018 IPR032712 AsmA-like, C-terminal BJD94_13160 317e3cdf08f1ae9007e68afff23b374e 1283 Pfam PF13116 Protein of unknown function 496 782 1.6E-92 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 BJD94_13160 317e3cdf08f1ae9007e68afff23b374e 1283 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1270 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 3.5E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 4.4E-17 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 152 6.2E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 Gene3D G3DSA:3.30.65.10 11 62 3.8E-9 T 14-10-2018 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 Gene3D G3DSA:3.30.65.10 63 107 7.0E-8 T 14-10-2018 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 SUPERFAMILY SSF57783 16 64 4.76E-15 T 14-10-2018 BJD94_10925 19407d3c999f437622db14a03aa2e83a 189 SUPERFAMILY SSF57783 66 108 4.76E-14 T 14-10-2018 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 SUPERFAMILY SSF55103 253 537 2.45E-51 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 Pfam PF13183 4Fe-4S dicluster domain 570 681 3.4E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 Pfam PF01565 FAD binding domain 52 191 1.9E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 SUPERFAMILY SSF46548 565 685 2.88E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 SUPERFAMILY SSF56176 18 277 5.14E-50 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 9.2E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 Gene3D G3DSA:3.30.70.2740 414 495 3.2E-5 T 14-10-2018 BJD94_02580 f04492fb442da8dd4487ed35fb7fee5b 1014 Gene3D G3DSA:3.30.465.40 16 211 1.9E-46 T 14-10-2018 BJD94_13490 ba673402e4752632e65238029181e9b2 345 Gene3D G3DSA:3.40.50.300 101 344 1.1E-102 T 14-10-2018 BJD94_13490 ba673402e4752632e65238029181e9b2 345 SUPERFAMILY SSF52540 5 335 2.26E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13490 ba673402e4752632e65238029181e9b2 345 Pfam PF00437 Type II/IV secretion system protein 12 270 4.2E-46 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_13490 ba673402e4752632e65238029181e9b2 345 Gene3D G3DSA:3.30.450.90 1 100 3.7E-36 T 14-10-2018 BJD94_13490 ba673402e4752632e65238029181e9b2 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_13490 ba673402e4752632e65238029181e9b2 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 1.5E-152 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Gene3D G3DSA:3.30.450.20 37 204 5.4E-22 T 14-10-2018 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SMART SM00388 352 417 4.3E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Gene3D G3DSA:3.40.50.2300 589 718 2.6E-34 T 14-10-2018 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SUPERFAMILY SSF47384 340 418 2.75E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 1.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Gene3D G3DSA:1.10.287.130 317 415 6.2E-26 T 14-10-2018 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SMART SM00448 598 712 9.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SMART SM00387 464 579 7.9E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Pfam PF02743 Cache domain 41 227 2.5E-12 T 14-10-2018 IPR033479 Double Cache domain 1 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SUPERFAMILY SSF52172 596 731 1.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 6.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Gene3D G3DSA:3.30.565.10 416 581 2.0E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 Pfam PF00072 Response regulator receiver domain 601 712 4.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_01570 2480edb50bc3bb2a2606f63c8e63aaf8 805 SUPERFAMILY SSF55874 406 577 3.93E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_18740 0f2400784a94d3755e6311b6750df006 309 Gene3D G3DSA:3.20.80.10 142 308 3.8E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_18740 0f2400784a94d3755e6311b6750df006 309 SUPERFAMILY SSF46689 15 65 9.32E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 Gene3D G3DSA:1.10.10.60 68 128 5.6E-16 T 14-10-2018 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 Pfam PF12833 Helix-turn-helix domain 37 116 4.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 Pfam PF06445 GyrI-like small molecule binding domain 171 306 6.8E-17 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BJD94_18740 0f2400784a94d3755e6311b6750df006 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 98 114 3.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 83 98 3.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 SUPERFAMILY SSF46689 68 118 7.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 68 110 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 SMART SM00871 142 307 5.9E-16 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BJD94_18740 0f2400784a94d3755e6311b6750df006 309 SMART SM00342 31 114 4.7E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 Gene3D G3DSA:1.10.10.60 5 67 7.2E-19 T 14-10-2018 BJD94_18740 0f2400784a94d3755e6311b6750df006 309 SUPERFAMILY SSF55136 143 308 1.26E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_06575 b2216d356502afaec6ca12780773ae89 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 440 2.2E-128 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 BJD94_06575 b2216d356502afaec6ca12780773ae89 443 SMART SM00471 62 268 2.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_06575 b2216d356502afaec6ca12780773ae89 443 SUPERFAMILY SSF109604 23 441 3.3E-79 T 14-10-2018 BJD94_06575 b2216d356502afaec6ca12780773ae89 443 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 439 34.332 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 BJD94_06575 b2216d356502afaec6ca12780773ae89 443 Pfam PF13286 Phosphohydrolase-associated domain 350 437 4.7E-26 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain BJD94_06575 b2216d356502afaec6ca12780773ae89 443 Pfam PF01966 HD domain 66 149 5.2E-8 T 14-10-2018 IPR006674 HD domain BJD94_01950 65b87163c221ee4095e50ab02dabd473 492 Gene3D G3DSA:1.10.3210.10 275 490 1.0E-76 T 14-10-2018 BJD94_01950 65b87163c221ee4095e50ab02dabd473 492 Pfam PF01966 HD domain 302 436 3.3E-18 T 14-10-2018 IPR006674 HD domain BJD94_01950 65b87163c221ee4095e50ab02dabd473 492 SUPERFAMILY SSF109604 276 474 1.13E-33 T 14-10-2018 BJD94_01950 65b87163c221ee4095e50ab02dabd473 492 SMART SM00471 296 446 1.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_20085 e00941434f6a7198d985139e7868370b 459 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 453 1.1E-43 T 14-10-2018 IPR000160 GGDEF domain BJD94_20085 e00941434f6a7198d985139e7868370b 459 SMART SM01079 47 223 2.1E-29 T 14-10-2018 IPR006189 CHASE domain BJD94_20085 e00941434f6a7198d985139e7868370b 459 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 454 2.6E-44 T 14-10-2018 IPR000160 GGDEF domain BJD94_20085 e00941434f6a7198d985139e7868370b 459 SMART SM00267 283 458 1.1E-47 T 14-10-2018 IPR000160 GGDEF domain BJD94_20085 e00941434f6a7198d985139e7868370b 459 Gene3D G3DSA:3.30.70.270 290 458 9.1E-52 T 14-10-2018 BJD94_20085 e00941434f6a7198d985139e7868370b 459 SUPERFAMILY SSF55073 299 455 3.84E-44 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_20085 e00941434f6a7198d985139e7868370b 459 Pfam PF03924 CHASE domain 109 221 2.1E-13 T 14-10-2018 IPR006189 CHASE domain BJD94_20035 cd384666f8cf430376e43710f5d8f3e2 299 Gene3D G3DSA:3.40.50.150 42 289 1.8E-52 T 14-10-2018 BJD94_20035 cd384666f8cf430376e43710f5d8f3e2 299 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 293 19.125 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD94_20035 cd384666f8cf430376e43710f5d8f3e2 299 Pfam PF01564 Spermine/spermidine synthase domain 83 221 1.6E-6 T 14-10-2018 BJD94_20035 cd384666f8cf430376e43710f5d8f3e2 299 SUPERFAMILY SSF53335 19 257 2.16E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 4.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 SUPERFAMILY SSF46785 3 84 1.36E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 Pfam PF03466 LysR substrate binding domain 92 257 2.3E-17 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 SUPERFAMILY SSF53850 92 290 7.21E-24 T 14-10-2018 BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 Gene3D G3DSA:3.40.190.290 93 287 6.1E-34 T 14-10-2018 BJD94_05310 6122bc06162336906441f2b2a2eaa8ef 291 Gene3D G3DSA:1.10.10.10 2 86 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 Pfam PF08402 TOBE domain 276 342 2.6E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 Pfam PF00005 ABC transporter 20 164 8.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 SMART SM00382 29 214 3.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 SUPERFAMILY SSF52540 5 242 1.5E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 SUPERFAMILY SSF50331 263 342 1.02E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_14145 d89e3ab0204b7af06236bdefa443e3b1 342 Gene3D G3DSA:3.40.50.300 1 240 5.1E-76 T 14-10-2018 BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 Gene3D G3DSA:2.70.50.50 24 201 1.2E-80 T 14-10-2018 BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 61.148 T 14-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 Gene3D G3DSA:3.30.70.2150 208 316 4.5E-38 T 14-10-2018 BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 37 198 1.8E-32 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 SUPERFAMILY SSF81296 24 202 1.13E-55 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_20470 7cc470a4e7e1d1dc5965978b892e169c 485 Gene3D G3DSA:2.60.40.2550 317 414 4.4E-36 T 14-10-2018 BJD94_12375 134a40045569ada55d359efeccd8a55a 373 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 49.822 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BJD94_12375 134a40045569ada55d359efeccd8a55a 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_12375 134a40045569ada55d359efeccd8a55a 373 SUPERFAMILY SSF54862 165 316 3.56E-19 T 14-10-2018 BJD94_12375 134a40045569ada55d359efeccd8a55a 373 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 4.5E-152 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BJD94_12375 134a40045569ada55d359efeccd8a55a 373 Pfam PF13484 4Fe-4S double cluster binding domain 189 252 2.2E-19 T 14-10-2018 BJD94_12375 134a40045569ada55d359efeccd8a55a 373 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 8.0E-25 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BJD94_05855 89334e816f8497388f3595637ce6f80c 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 6.1E-88 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BJD94_05855 89334e816f8497388f3595637ce6f80c 235 SUPERFAMILY SSF53335 15 230 4.94E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_05855 89334e816f8497388f3595637ce6f80c 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.539 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BJD94_05855 89334e816f8497388f3595637ce6f80c 235 Gene3D G3DSA:3.40.50.150 11 235 5.2E-75 T 14-10-2018 BJD94_05855 89334e816f8497388f3595637ce6f80c 235 Pfam PF13489 Methyltransferase domain 52 200 8.2E-25 T 14-10-2018 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 Pfam PF02300 Fumarate reductase subunit C 2 127 7.1E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 SUPERFAMILY SSF81343 1 127 4.14E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.991 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 Gene3D G3DSA:1.20.1300.10 1 127 3.6E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_12225 49314cb71613e1ee67e151d97df294f2 127 PIRSF PIRSF000180 1 127 6.0E-58 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 BJD94_12555 3ed6009b06e187b7da5c24f1e50d2a25 313 SUPERFAMILY SSF56235 5 309 2.8E-98 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_12555 3ed6009b06e187b7da5c24f1e50d2a25 313 Gene3D G3DSA:3.60.20.30 178 313 6.4E-47 T 14-10-2018 BJD94_12555 3ed6009b06e187b7da5c24f1e50d2a25 313 Pfam PF01112 Asparaginase 7 308 3.1E-111 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 BJD94_18875 1e84be8121e90998def6a94be126dc55 403 Pfam PF07690 Major Facilitator Superfamily 20 361 6.3E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_18875 1e84be8121e90998def6a94be126dc55 403 SUPERFAMILY SSF103473 13 399 5.36E-41 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_18875 1e84be8121e90998def6a94be126dc55 403 Gene3D G3DSA:1.20.1250.20 9 396 8.5E-35 T 14-10-2018 BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 SUPERFAMILY SSF46785 4 81 4.19E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 Gene3D G3DSA:3.40.190.290 94 302 1.1E-15 T 14-10-2018 BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 Gene3D G3DSA:1.10.10.10 1 84 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 SUPERFAMILY SSF53850 94 283 3.62E-13 T 14-10-2018 BJD94_16935 cb8efa18b610fceb9a80d6a88b432e97 303 Pfam PF03466 LysR substrate binding domain 94 260 6.7E-14 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_14060 3b59d8e5e0dad31271c79468004bf442 161 SUPERFAMILY SSF55083 1 157 2.35E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_14060 3b59d8e5e0dad31271c79468004bf442 161 Gene3D G3DSA:3.30.70.560 1 159 2.4E-59 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_14060 3b59d8e5e0dad31271c79468004bf442 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_14060 3b59d8e5e0dad31271c79468004bf442 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 8.3E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_14060 3b59d8e5e0dad31271c79468004bf442 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.4E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD94_04105 e491170c1f07dc4f6745dfce30db6394 180 Pfam PF07126 Cell-division protein ZapC 1 168 3.5E-63 T 14-10-2018 IPR009809 Cell division protein ZapC BJD94_04105 e491170c1f07dc4f6745dfce30db6394 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.996 T 14-10-2018 IPR009809 Cell division protein ZapC BJD94_04105 e491170c1f07dc4f6745dfce30db6394 180 PIRSF PIRSF010252 1 178 3.2E-69 T 14-10-2018 IPR009809 Cell division protein ZapC BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 Gene3D G3DSA:3.40.50.2300 4 141 4.4E-37 T 14-10-2018 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 SUPERFAMILY SSF52172 8 155 1.99E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 SUPERFAMILY SSF109604 147 349 1.6E-33 T 14-10-2018 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 Gene3D G3DSA:1.10.3210.10 148 364 3.6E-74 T 14-10-2018 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 SMART SM00448 9 121 8.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 Pfam PF13487 HD domain 233 303 2.3E-19 T 14-10-2018 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 Pfam PF00072 Response regulator receiver domain 11 121 1.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17315 8d05ee5c690802f8d1fc73375c50117b 364 SMART SM00471 170 321 2.5E-9 T 14-10-2018 IPR003607 HD/PDEase domain BJD94_01085 91523d6fb8cb00a59ab2ca51572ec2c8 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 187 2.9E-74 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB BJD94_01085 91523d6fb8cb00a59ab2ca51572ec2c8 196 Gene3D G3DSA:3.40.50.10610 39 188 1.0E-43 T 14-10-2018 BJD94_01085 91523d6fb8cb00a59ab2ca51572ec2c8 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.5E-55 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 Gene3D G3DSA:3.30.230.10 1 107 8.5E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 Pfam PF00825 Ribonuclease P 1 101 7.9E-31 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 SUPERFAMILY SSF54211 1 103 8.6E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 5.8E-27 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.106 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BJD94_11145 b9870d8c8b46ee84166185e20c6f07db 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 3.0E-46 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 SMART SM00388 254 319 9.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 464 1.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 Gene3D G3DSA:1.10.287.130 205 320 6.6E-20 T 14-10-2018 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 SUPERFAMILY SSF47384 237 318 3.53E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 3.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 Pfam PF08521 Two-component sensor kinase N-terminal 23 177 8.4E-9 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 Gene3D G3DSA:3.30.565.10 323 471 2.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 SUPERFAMILY SSF55874 326 468 3.27E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_18440 f7934ae61087356f7997f8987e7f5e49 472 SMART SM00387 362 471 1.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 Gene3D G3DSA:3.40.50.1100 83 392 4.2E-138 T 14-10-2018 BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 Gene3D G3DSA:3.40.50.1100 101 399 4.2E-138 T 14-10-2018 BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 TIGRFAM TIGR00260 thrC: threonine synthase 53 391 1.2E-114 T 14-10-2018 IPR004450 Threonine synthase-like BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 Gene3D G3DSA:3.90.1380.10 1 79 8.8E-31 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 Pfam PF14821 Threonine synthase N terminus 8 78 5.1E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 SUPERFAMILY SSF53686 1 424 3.27E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD94_08720 2d6869222d2c00b48b0f7920ad6cefa4 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 368 3.1E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD94_13670 58764b212bc7404ec0e358a0a6d4e7eb 325 Pfam PF03888 MucB/RseB N-terminal domain 26 195 2.1E-57 T 14-10-2018 IPR033434 MucB/RseB, N-terminal BJD94_13670 58764b212bc7404ec0e358a0a6d4e7eb 325 Gene3D G3DSA:2.50.20.10 24 208 6.3E-51 T 14-10-2018 BJD94_13670 58764b212bc7404ec0e358a0a6d4e7eb 325 PIRSF PIRSF005427 1 318 4.5E-81 T 14-10-2018 IPR005588 MucB/RseB BJD94_13670 58764b212bc7404ec0e358a0a6d4e7eb 325 Pfam PF17188 MucB/RseB C-terminal domain 217 311 3.2E-27 T 14-10-2018 IPR033436 MucB/RseB, C-terminal BJD94_13670 58764b212bc7404ec0e358a0a6d4e7eb 325 Gene3D G3DSA:3.30.200.100 217 316 5.7E-27 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily BJD94_16945 216d9287bc05fa11f91fc075e1e74ffe 389 Pfam PF01734 Patatin-like phospholipase 80 265 6.8E-17 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BJD94_16945 216d9287bc05fa11f91fc075e1e74ffe 389 SUPERFAMILY SSF52151 78 375 1.94E-34 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD94_16945 216d9287bc05fa11f91fc075e1e74ffe 389 Gene3D G3DSA:3.40.1090.10 62 180 5.1E-16 T 14-10-2018 BJD94_16945 216d9287bc05fa11f91fc075e1e74ffe 389 Gene3D G3DSA:3.40.1090.10 181 280 7.8E-9 T 14-10-2018 BJD94_18085 dfec8c99a0711a6b833301e07f17d0cb 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.7E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 BJD94_07080 6ce54ff34b23924cebe1fd822e48df2f 530 Pfam PF00999 Sodium/hydrogen exchanger family 3 350 5.6E-35 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD94_07080 6ce54ff34b23924cebe1fd822e48df2f 530 Pfam PF02254 TrkA-N domain 388 504 3.9E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD94_07080 6ce54ff34b23924cebe1fd822e48df2f 530 Gene3D G3DSA:3.40.50.720 379 527 7.7E-32 T 14-10-2018 BJD94_07080 6ce54ff34b23924cebe1fd822e48df2f 530 SUPERFAMILY SSF51735 387 518 1.36E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_07080 6ce54ff34b23924cebe1fd822e48df2f 530 Gene3D G3DSA:1.20.1530.20 2 362 5.8E-44 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily BJD94_05730 0d08579898b2016e4e5774120f50929e 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.101 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BJD94_05730 0d08579898b2016e4e5774120f50929e 341 Pfam PF02504 Fatty acid synthesis protein 5 327 6.9E-98 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 BJD94_05730 0d08579898b2016e4e5774120f50929e 341 Gene3D G3DSA:3.40.718.10 2 340 8.4E-119 T 14-10-2018 BJD94_05730 0d08579898b2016e4e5774120f50929e 341 SUPERFAMILY SSF53659 4 336 2.96E-102 T 14-10-2018 BJD94_05730 0d08579898b2016e4e5774120f50929e 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 5.8E-104 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BJD94_05730 0d08579898b2016e4e5774120f50929e 341 PIRSF PIRSF002465 2 339 1.2E-123 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 Gene3D G3DSA:1.20.1440.100 15 87 2.1E-31 T 14-10-2018 BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 190 5.4E-36 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 SUPERFAMILY SSF56784 2 187 1.74E-21 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 Gene3D G3DSA:3.40.50.1000 3 190 2.1E-31 T 14-10-2018 IPR023214 HAD superfamily BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 1.3E-25 T 14-10-2018 BJD94_18385 a6f3b8149cfe9e29ed5de777662edc49 200 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 2.1E-31 T 14-10-2018 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SMART SM00388 265 331 5.5E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Gene3D G3DSA:1.10.287.130 240 329 1.4E-29 T 14-10-2018 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SMART SM00086 202 245 0.003 T 14-10-2018 IPR001610 PAC motif BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SMART SM00387 378 492 1.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Gene3D G3DSA:3.30.450.20 110 239 3.5E-22 T 14-10-2018 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 252 7.5E-7 T 14-10-2018 IPR000014 PAS domain BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Pfam PF00072 Response regulator receiver domain 519 628 2.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SUPERFAMILY SSF55785 126 247 4.19E-14 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 7.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 7.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 7.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 7.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 491 9.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SUPERFAMILY SSF52172 517 641 1.18E-31 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Gene3D G3DSA:3.40.50.12740 515 711 7.4E-36 T 14-10-2018 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SMART SM00448 517 630 7.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SUPERFAMILY SSF55874 320 488 1.19E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Gene3D G3DSA:3.30.565.10 331 496 4.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 331 1.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 SUPERFAMILY SSF47384 248 331 5.49E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_06305 1bc4a8c8527451dcaeb1e6f8b4da0464 718 Pfam PF08447 PAS fold 166 239 4.9E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 SUPERFAMILY SSF51621 5 294 5.83E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 258 3.0E-45 T 14-10-2018 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 Gene3D G3DSA:3.20.20.60 2 298 1.6E-98 T 14-10-2018 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.777 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BJD94_04545 64b1226b2546b91a78ca89e9227f3b2f 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.5E-127 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BJD94_02825 a92cc9982d64ec276a40d3c1072e1867 263 SUPERFAMILY SSF57783 224 260 7.65E-6 T 14-10-2018 BJD94_02825 a92cc9982d64ec276a40d3c1072e1867 263 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 223 262 8.0E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_02825 a92cc9982d64ec276a40d3c1072e1867 263 Gene3D G3DSA:3.30.65.10 210 262 9.1E-6 T 14-10-2018 BJD94_02825 a92cc9982d64ec276a40d3c1072e1867 263 Pfam PF08378 Nuclease-related domain 39 149 2.0E-31 T 14-10-2018 IPR011528 Nuclease-related domain, NERD BJD94_16085 10e0f3636d7a866c2d95529d6edc332e 157 PIRSF PIRSF006105 2 157 2.4E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BJD94_16085 10e0f3636d7a866c2d95529d6edc332e 157 Gene3D G3DSA:1.10.1130.10 70 137 5.6E-30 T 14-10-2018 BJD94_16085 10e0f3636d7a866c2d95529d6edc332e 157 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 37 150 1.3E-49 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB BJD94_16085 10e0f3636d7a866c2d95529d6edc332e 157 SUPERFAMILY SSF48695 38 154 8.54E-42 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_16265 90f47f3f4e4530e9630300293359fc86 300 Pfam PF00480 ROK family 3 296 1.4E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_16265 90f47f3f4e4530e9630300293359fc86 300 ProSitePatterns PS01125 ROK family signature. 131 158 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_16265 90f47f3f4e4530e9630300293359fc86 300 Gene3D G3DSA:3.30.420.40 5 294 5.0E-76 T 14-10-2018 BJD94_16265 90f47f3f4e4530e9630300293359fc86 300 SUPERFAMILY SSF53067 1 298 9.26E-56 T 14-10-2018 BJD94_16265 90f47f3f4e4530e9630300293359fc86 300 Gene3D G3DSA:3.30.420.40 120 287 5.0E-76 T 14-10-2018 BJD94_20480 fc0e2629e9436decd9d89a0136c0d702 213 PIRSF PIRSF039033 2 213 1.2E-65 T 14-10-2018 IPR028347 START domain-containing protein BJD94_20480 fc0e2629e9436decd9d89a0136c0d702 213 Pfam PF01852 START domain 23 205 1.1E-11 T 14-10-2018 IPR002913 START domain GO:0008289 BJD94_20480 fc0e2629e9436decd9d89a0136c0d702 213 SUPERFAMILY SSF55961 19 203 8.39E-41 T 14-10-2018 BJD94_20480 fc0e2629e9436decd9d89a0136c0d702 213 Gene3D G3DSA:3.30.530.20 24 210 1.1E-51 T 14-10-2018 IPR023393 START-like domain superfamily BJD94_21405 c497114aa2f12a9c973edc6e7bf58994 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.7E-20 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_21405 c497114aa2f12a9c973edc6e7bf58994 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.2E-39 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BJD94_21405 c497114aa2f12a9c973edc6e7bf58994 563 SUPERFAMILY SSF53850 120 557 7.42E-57 T 14-10-2018 BJD94_21405 c497114aa2f12a9c973edc6e7bf58994 563 Gene3D G3DSA:3.40.190.10 122 312 1.2E-36 T 14-10-2018 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 Pfam PF01726 LexA DNA binding domain 1 65 1.2E-28 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 SUPERFAMILY SSF46785 3 69 4.17E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 31.967 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 SUPERFAMILY SSF51306 81 203 1.92E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 Pfam PF00717 Peptidase S24-like 119 184 2.3E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 Gene3D G3DSA:1.10.10.10 1 69 3.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 Gene3D G3DSA:2.10.109.10 85 207 1.0E-44 T 14-10-2018 BJD94_11750 525ec6171fa8bc4473d203476c163c02 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 8.1E-81 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD94_20210 19de11634ee71d5c9e3eb3250636680a 300 Pfam PF00892 EamA-like transporter family 5 136 6.1E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_20210 19de11634ee71d5c9e3eb3250636680a 300 Pfam PF00892 EamA-like transporter family 153 300 1.9E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_20210 19de11634ee71d5c9e3eb3250636680a 300 SUPERFAMILY SSF103481 200 298 1.44E-8 T 14-10-2018 BJD94_20210 19de11634ee71d5c9e3eb3250636680a 300 SUPERFAMILY SSF103481 41 138 1.83E-9 T 14-10-2018 BJD94_20210 19de11634ee71d5c9e3eb3250636680a 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 1.3E-123 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative BJD94_20160 71b6be44442363a8a450732554681b98 241 Gene3D G3DSA:3.30.930.10 6 241 3.4E-44 T 14-10-2018 BJD94_20160 71b6be44442363a8a450732554681b98 241 SUPERFAMILY SSF55681 8 238 1.91E-47 T 14-10-2018 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 3.9E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 SUPERFAMILY SSF55035 146 261 8.63E-37 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 SUPERFAMILY SSF56542 26 409 4.71E-79 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 Gene3D G3DSA:3.90.770.10 92 406 3.7E-111 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 Gene3D G3DSA:3.30.70.420 146 261 3.7E-111 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_20780 a51d4d566ccfeb6b11a2bc583ab4cd14 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 5.5E-113 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 SMART SM01329 7 356 2.0E-202 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 9.7E-137 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.047 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 SUPERFAMILY SSF53659 4 360 1.25E-123 T 14-10-2018 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 Gene3D G3DSA:3.40.718.10 1 363 8.5E-157 T 14-10-2018 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 5.5E-164 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BJD94_09365 ecee1c7670f9a5bc9d05956cd635d1ee 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BJD94_05480 6b32b9494f11eb5b1a886d1b69fa91c1 269 SUPERFAMILY SSF53335 21 200 1.02E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_05480 6b32b9494f11eb5b1a886d1b69fa91c1 269 Gene3D G3DSA:3.40.50.150 21 228 2.1E-41 T 14-10-2018 BJD94_05480 6b32b9494f11eb5b1a886d1b69fa91c1 269 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 15 269 32.622 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BJD94_05480 6b32b9494f11eb5b1a886d1b69fa91c1 269 Pfam PF08241 Methyltransferase domain 59 152 5.5E-27 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD94_05480 6b32b9494f11eb5b1a886d1b69fa91c1 269 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 23 268 4.1E-68 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BJD94_19065 d2f6774a90f4dba41554881f677e33dc 643 Pfam PF00884 Sulfatase 281 551 1.4E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_19065 d2f6774a90f4dba41554881f677e33dc 643 Gene3D G3DSA:3.30.1120.80 262 639 2.5E-182 T 14-10-2018 BJD94_19065 d2f6774a90f4dba41554881f677e33dc 643 Gene3D G3DSA:3.40.720.10 272 568 2.5E-182 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_19065 d2f6774a90f4dba41554881f677e33dc 643 SUPERFAMILY SSF53649 279 606 6.15E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_19065 d2f6774a90f4dba41554881f677e33dc 643 PIRSF PIRSF005091 7 642 1.1E-102 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 Gene3D G3DSA:1.20.81.30 260 371 6.0E-26 T 14-10-2018 BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.6E-26 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 4.4E-30 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 Gene3D G3DSA:1.20.81.30 58 175 9.9E-30 T 14-10-2018 BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 8.3E-21 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 8.3E-21 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 8.3E-21 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13975 3b4196221bdbef027a82aa0b8e488649 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 8.3E-21 T 14-10-2018 IPR003004 GspF/PilC family BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 148 433 6.5E-73 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 ProSitePatterns PS00018 EF-hand calcium-binding domain. 245 257 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 SUPERFAMILY SSF55486 282 356 6.04E-5 T 14-10-2018 BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 SUPERFAMILY SSF49299 779 877 3.61E-5 T 14-10-2018 IPR035986 PKD domain superfamily BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 SMART SM00089 783 875 0.0064 T 14-10-2018 IPR022409 PKD/Chitinase domain BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 PIRSF PIRSF036597 1 1002 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 Gene3D G3DSA:2.60.40.10 790 872 4.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_06695 2a1e019287351b281d1c04dece0f320d 1005 Pfam PF05547 Immune inhibitor A peptidase M6 172 377 5.7E-12 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BJD94_19125 5c32ba5815128ca2d579380b113651f9 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 4.0E-79 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_19125 5c32ba5815128ca2d579380b113651f9 218 SUPERFAMILY SSF55821 10 213 4.35E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BJD94_19125 5c32ba5815128ca2d579380b113651f9 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.8 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_19125 5c32ba5815128ca2d579380b113651f9 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 1.7E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_19125 5c32ba5815128ca2d579380b113651f9 218 Gene3D G3DSA:3.90.870.10 6 218 1.5E-88 T 14-10-2018 BJD94_07470 1489660ae8345bafc8867b797f21763b 202 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 201 27.269 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD94_07470 1489660ae8345bafc8867b797f21763b 202 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 11 200 1.6E-39 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD94_07470 1489660ae8345bafc8867b797f21763b 202 Gene3D G3DSA:2.50.20.10 23 202 2.0E-53 T 14-10-2018 BJD94_07470 1489660ae8345bafc8867b797f21763b 202 Pfam PF03550 Outer membrane lipoprotein LolB 42 199 2.4E-44 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD94_07470 1489660ae8345bafc8867b797f21763b 202 SUPERFAMILY SSF89392 18 201 4.32E-49 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 Pfam PF06761 Intracellular multiplication and human macrophage-killing 505 804 1.6E-71 T 14-10-2018 IPR009612 ImcF-related BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 SUPERFAMILY SSF52540 120 305 8.82E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1122 6.0E-57 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 Pfam PF14331 ImcF-related N-terminal domain 194 451 1.5E-89 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain BJD94_15175 2fc5c232b15d349f2ff5fe4d707b2b47 1174 Gene3D G3DSA:3.40.50.300 128 316 2.9E-6 T 14-10-2018 BJD94_21365 319f7cee299c36a11cddeca986c42b83 121 Pfam PF12680 SnoaL-like domain 13 116 2.1E-7 T 14-10-2018 IPR037401 SnoaL-like domain BJD94_21365 319f7cee299c36a11cddeca986c42b83 121 PIRSF PIRSF030561 5 121 1.1E-45 T 14-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 BJD94_21365 319f7cee299c36a11cddeca986c42b83 121 SUPERFAMILY SSF54427 6 119 2.2E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily BJD94_21365 319f7cee299c36a11cddeca986c42b83 121 Gene3D G3DSA:3.10.450.50 6 120 2.7E-29 T 14-10-2018 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 Pfam PF02441 Flavoprotein 7 179 9.0E-45 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 SUPERFAMILY SSF102645 184 399 4.19E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 Gene3D G3DSA:3.40.50.1950 1 186 8.7E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 SUPERFAMILY SSF52507 1 182 1.27E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 1.6E-152 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 Gene3D G3DSA:3.40.50.10300 187 400 5.8E-86 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD94_10235 9110952edf741fb411ce66dfcae504eb 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 8.3E-77 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD94_12500 4c957dda6301ac019f27afb8cddb6212 263 Gene3D G3DSA:3.10.180.50 3 239 2.4E-89 T 14-10-2018 BJD94_12500 4c957dda6301ac019f27afb8cddb6212 263 SMART SM01150 3 262 2.1E-108 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 BJD94_12500 4c957dda6301ac019f27afb8cddb6212 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 117 2.8E-19 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 BJD94_12500 4c957dda6301ac019f27afb8cddb6212 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 3.4E-27 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 3.4E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 469 6.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SMART SM00388 244 309 3.8E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Gene3D G3DSA:3.40.50.12740 513 644 9.6E-38 T 14-10-2018 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SUPERFAMILY SSF47384 229 310 4.32E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SUPERFAMILY SSF55874 298 470 9.04E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SUPERFAMILY SSF52172 514 632 1.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Pfam PF00072 Response regulator receiver domain 516 627 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SMART SM00387 356 472 2.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Gene3D G3DSA:1.10.287.130 210 307 4.2E-30 T 14-10-2018 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 146 3.5E-16 T 14-10-2018 IPR033414 Periplasmic sensor domain BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 SMART SM00448 513 627 6.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_18005 e4585013c6626e3b2ce275096e89f8c8 646 Gene3D G3DSA:3.30.565.10 308 472 1.6E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_06925 fc4f1ba0b6cb762be4db6868cedaa522 75 Pfam PF04023 FeoA domain 1 73 1.6E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BJD94_06925 fc4f1ba0b6cb762be4db6868cedaa522 75 SMART SM00899 1 74 1.3E-22 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BJD94_06925 fc4f1ba0b6cb762be4db6868cedaa522 75 Gene3D G3DSA:2.30.30.90 1 75 1.3E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain BJD94_06925 fc4f1ba0b6cb762be4db6868cedaa522 75 SUPERFAMILY SSF50037 4 73 4.12E-18 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 SMART SM00052 2 195 1.2E-4 T 14-10-2018 IPR001633 EAL domain BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 SUPERFAMILY SSF141868 5 193 3.66E-30 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 Gene3D G3DSA:3.20.20.450 4 196 6.3E-20 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 PIRSF PIRSF003180 1 403 3.0E-171 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 SUPERFAMILY SSF109604 181 400 4.71E-43 T 14-10-2018 BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 Pfam PF08668 HDOD domain 205 319 2.8E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 Pfam PF00563 EAL domain 74 190 6.7E-17 T 14-10-2018 IPR001633 EAL domain BJD94_05345 e21eaee1ab4469db714098cd3b66ac45 404 Gene3D G3DSA:1.10.3210.10 197 396 9.2E-20 T 14-10-2018 BJD94_15585 801e0b88b244e65f53da53550e56d020 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 4.9E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_15585 801e0b88b244e65f53da53550e56d020 157 Gene3D G3DSA:3.10.50.40 20 157 2.0E-52 T 14-10-2018 BJD94_15585 801e0b88b244e65f53da53550e56d020 157 SUPERFAMILY SSF54534 19 156 5.7E-50 T 14-10-2018 BJD94_15585 801e0b88b244e65f53da53550e56d020 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 5.4E-11 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD94_21210 f63543c98cd66663a3bd73c2b4eaa245 275 SMART SM00052 13 260 1.0E-13 T 14-10-2018 IPR001633 EAL domain BJD94_21210 f63543c98cd66663a3bd73c2b4eaa245 275 SUPERFAMILY SSF141868 25 264 3.53E-49 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_21210 f63543c98cd66663a3bd73c2b4eaa245 275 Gene3D G3DSA:3.20.20.450 21 267 1.2E-48 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_21210 f63543c98cd66663a3bd73c2b4eaa245 275 Pfam PF00563 EAL domain 26 255 3.7E-44 T 14-10-2018 IPR001633 EAL domain BJD94_00615 86ee93b8db816c4a632a78ed800d8ba5 682 Pfam PF02120 Flagellar hook-length control protein FliK 553 636 8.7E-25 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BJD94_00615 86ee93b8db816c4a632a78ed800d8ba5 682 Gene3D G3DSA:3.30.750.140 533 646 5.5E-32 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BJD94_20215 2a6fe7646d288b861d4dacdc6e4b0ea5 482 Gene3D G3DSA:3.30.9.10 139 370 5.4E-59 T 14-10-2018 BJD94_20215 2a6fe7646d288b861d4dacdc6e4b0ea5 482 Gene3D G3DSA:3.50.50.60 45 411 5.4E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20215 2a6fe7646d288b861d4dacdc6e4b0ea5 482 Pfam PF01266 FAD dependent oxidoreductase 45 409 2.5E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_20215 2a6fe7646d288b861d4dacdc6e4b0ea5 482 SUPERFAMILY SSF51905 31 323 4.07E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20215 2a6fe7646d288b861d4dacdc6e4b0ea5 482 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 20 480 1.7E-234 T 14-10-2018 IPR017715 Putative aminophosphonate oxidoreductase BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 669 1.5E-52 T 14-10-2018 IPR000160 GGDEF domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Gene3D G3DSA:3.30.450.20 253 375 2.2E-29 T 14-10-2018 BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Gene3D G3DSA:3.30.70.270 511 684 2.4E-60 T 14-10-2018 BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SMART SM00086 336 379 1.1E-9 T 14-10-2018 IPR001610 PAC motif BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SMART SM00086 459 501 0.29 T 14-10-2018 IPR001610 PAC motif BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SUPERFAMILY SSF55785 267 380 1.13E-22 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SMART SM00267 501 674 5.3E-70 T 14-10-2018 IPR000160 GGDEF domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SUPERFAMILY SSF55073 517 676 1.73E-51 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Gene3D G3DSA:3.30.450.20 387 510 2.5E-27 T 14-10-2018 BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 508 672 2.1E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SUPERFAMILY SSF55785 397 498 6.81E-23 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Pfam PF08447 PAS fold 284 373 5.1E-22 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 Pfam PF13426 PAS domain 398 499 7.6E-12 T 14-10-2018 IPR000014 PAS domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SMART SM00091 260 329 0.0027 T 14-10-2018 IPR000014 PAS domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 SMART SM00091 387 456 1.1E-5 T 14-10-2018 IPR000014 PAS domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 508 1.0E-18 T 14-10-2018 IPR000014 PAS domain BJD94_16790 fea884295b745bcdf21e6861b26b6fd6 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 256 386 1.3E-13 T 14-10-2018 IPR000014 PAS domain BJD94_16515 218be5f3c7a2414325089dabe56d84b7 236 SUPERFAMILY SSF56281 11 199 2.66E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_16515 218be5f3c7a2414325089dabe56d84b7 236 SMART SM00849 15 197 4.8E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16515 218be5f3c7a2414325089dabe56d84b7 236 Pfam PF00753 Metallo-beta-lactamase superfamily 16 162 3.0E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_16515 218be5f3c7a2414325089dabe56d84b7 236 Gene3D G3DSA:3.60.15.10 2 232 1.0E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_03805 8ec3a683172c0f61181467e1c9146a34 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.2E-33 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 Gene3D G3DSA:3.40.50.2300 3 139 1.0E-33 T 14-10-2018 BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 SMART SM00267 140 316 3.7E-58 T 14-10-2018 IPR000160 GGDEF domain BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 315 3.0E-49 T 14-10-2018 IPR000160 GGDEF domain BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 SMART SM00448 8 120 1.8E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 SUPERFAMILY SSF55073 156 317 8.11E-48 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 Gene3D G3DSA:3.30.70.270 140 315 1.0E-52 T 14-10-2018 BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 SUPERFAMILY SSF52172 6 159 9.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 2.4E-45 T 14-10-2018 IPR000160 GGDEF domain BJD94_21595 1c934f6764a25b0494dff410f0e903c9 319 Pfam PF00072 Response regulator receiver domain 10 117 4.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_08325 45157b268c7e59954ce261c0c987a8c7 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 229 6.5E-116 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related BJD94_08325 45157b268c7e59954ce261c0c987a8c7 258 PIRSF PIRSF028756 1 258 3.3E-134 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 BJD94_08325 45157b268c7e59954ce261c0c987a8c7 258 SUPERFAMILY SSF52540 35 222 2.56E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08325 45157b268c7e59954ce261c0c987a8c7 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 4.1E-116 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 BJD94_08325 45157b268c7e59954ce261c0c987a8c7 258 Gene3D G3DSA:3.40.50.300 1 239 5.3E-100 T 14-10-2018 BJD94_10145 fd51ba9c16f1faf7013cd235936ee119 351 Pfam PF00793 DAHP synthetase I family 45 338 1.1E-92 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_10145 fd51ba9c16f1faf7013cd235936ee119 351 SUPERFAMILY SSF51569 17 347 2.83E-120 T 14-10-2018 BJD94_10145 fd51ba9c16f1faf7013cd235936ee119 351 Gene3D G3DSA:3.20.20.70 2 351 9.4E-145 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10145 fd51ba9c16f1faf7013cd235936ee119 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 349 5.9E-148 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_10145 fd51ba9c16f1faf7013cd235936ee119 351 PIRSF PIRSF001361 1 351 3.6E-144 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 SMART SM00173 209 380 0.0091 T 14-10-2018 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 462 1.3E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 PIRSF PIRSF006485 1 471 1.5E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 SUPERFAMILY SSF52540 4 163 1.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Gene3D G3DSA:3.40.50.300 2 160 1.3E-42 T 14-10-2018 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 372 1.5E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Gene3D G3DSA:3.40.50.300 202 380 3.4E-50 T 14-10-2018 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Pfam PF01926 50S ribosome-binding GTPase 210 327 1.3E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.1E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 1.1E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 SUPERFAMILY SSF52540 194 469 7.56E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.8E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.8E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Hamap MF_00195 GTPase Der [der]. 2 466 39.122 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 Gene3D G3DSA:3.30.300.20 383 465 3.6E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 SMART SM00382 1 173 2.3 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_08160 98012d63fa306f0a0206e4ab66cd108c 496 SMART SM00382 206 353 0.12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 Gene3D G3DSA:1.10.10.10 4 92 4.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 SUPERFAMILY SSF53850 92 296 9.65E-42 T 14-10-2018 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 Gene3D G3DSA:3.40.190.290 94 295 2.1E-37 T 14-10-2018 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 SUPERFAMILY SSF46785 5 113 2.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_14730 c9e5774ba7e2c55273ea96a9f65ffe7a 298 Pfam PF03466 LysR substrate binding domain 92 293 2.4E-47 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_02400 a29830b728c0f96301fd9d32a3cb25c5 165 Pfam PF13505 Outer membrane protein beta-barrel domain 5 164 1.9E-13 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_02400 a29830b728c0f96301fd9d32a3cb25c5 165 Gene3D G3DSA:2.40.160.20 18 165 1.8E-23 T 14-10-2018 BJD94_02400 a29830b728c0f96301fd9d32a3cb25c5 165 SUPERFAMILY SSF56925 17 164 6.54E-22 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_15215 0c5f801888d3adf4e10b36cb978e9414 131 Gene3D G3DSA:3.30.1330.80 2 131 4.7E-40 T 14-10-2018 BJD94_15215 0c5f801888d3adf4e10b36cb978e9414 131 Pfam PF03479 Domain of unknown function (DUF296) 6 109 8.9E-19 T 14-10-2018 IPR005175 PPC domain BJD94_15215 0c5f801888d3adf4e10b36cb978e9414 131 SUPERFAMILY SSF117856 3 130 2.88E-31 T 14-10-2018 BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 SMART SM00635 508 589 1.2E-8 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 SUPERFAMILY SSF49373 509 591 1.65E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 Gene3D G3DSA:2.60.40.1080 338 420 5.2E-6 T 14-10-2018 BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 SUPERFAMILY SSF49373 456 505 6.2E-5 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 Gene3D G3DSA:2.60.40.1080 421 507 7.4E-10 T 14-10-2018 BJD94_20895 17a9c0dca3c541e8c7052defceee7c8b 1162 Gene3D G3DSA:2.60.40.1080 508 596 3.4E-18 T 14-10-2018 BJD94_06765 d38c09529d8bc0ad8cd64a3fb8fe4861 218 Gene3D G3DSA:2.50.20.10 37 218 2.8E-24 T 14-10-2018 BJD94_06765 d38c09529d8bc0ad8cd64a3fb8fe4861 218 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 203 8.5E-12 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BJD94_06765 d38c09529d8bc0ad8cd64a3fb8fe4861 218 SUPERFAMILY SSF89392 39 205 9.42E-24 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD94_10515 33a35c6191ba8ea1a63fa7c140f10cad 141 Gene3D G3DSA:3.50.80.10 1 141 2.3E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BJD94_10515 33a35c6191ba8ea1a63fa7c140f10cad 141 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 30.267 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD94_10515 33a35c6191ba8ea1a63fa7c140f10cad 141 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 1 139 3.3E-50 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD94_10515 33a35c6191ba8ea1a63fa7c140f10cad 141 SUPERFAMILY SSF69500 1 140 3.79E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BJD94_10515 33a35c6191ba8ea1a63fa7c140f10cad 141 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 141 2.0E-62 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD94_01055 b4e165f9a986c88d300e0494d9965d32 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD94_01055 b4e165f9a986c88d300e0494d9965d32 252 SUPERFAMILY SSF53167 4 251 1.23E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_01055 b4e165f9a986c88d300e0494d9965d32 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.4E-110 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 BJD94_01055 b4e165f9a986c88d300e0494d9965d32 252 Gene3D G3DSA:3.40.50.1580 1 252 3.2E-81 T 14-10-2018 BJD94_01055 b4e165f9a986c88d300e0494d9965d32 252 Pfam PF01048 Phosphorylase superfamily 20 240 6.4E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 SMART SM00304 209 263 1.1E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 Gene3D G3DSA:1.10.287.950 209 540 7.1E-76 T 14-10-2018 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 505 1.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 SUPERFAMILY SSF58104 231 540 3.27E-80 T 14-10-2018 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 SMART SM00283 278 539 5.0E-83 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 Pfam PF00672 HAMP domain 209 259 1.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 2.3E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.3E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_18390 f039a7f804c7ec80163dd5029d432d2a 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 306 335 2.3E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD94_08440 3edabd61804272e5c8d5eaba10fc939b 241 Gene3D G3DSA:1.25.40.10 28 240 1.1E-52 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_08440 3edabd61804272e5c8d5eaba10fc939b 241 SUPERFAMILY SSF48452 30 119 7.25E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_08440 3edabd61804272e5c8d5eaba10fc939b 241 Pfam PF13525 Outer membrane lipoprotein 26 233 1.0E-79 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like BJD94_08440 3edabd61804272e5c8d5eaba10fc939b 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 8.3E-79 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD BJD94_08440 3edabd61804272e5c8d5eaba10fc939b 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.109 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD BJD94_05610 775e880d27e5b25d5775057e9a369c3b 226 SUPERFAMILY SSF52540 6 223 2.93E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05610 775e880d27e5b25d5775057e9a369c3b 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.5E-85 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD94_05610 775e880d27e5b25d5775057e9a369c3b 226 Gene3D G3DSA:3.40.50.300 1 226 1.7E-83 T 14-10-2018 BJD94_05610 775e880d27e5b25d5775057e9a369c3b 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.6 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD94_05610 775e880d27e5b25d5775057e9a369c3b 226 Pfam PF02224 Cytidylate kinase 8 221 1.7E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD94_05470 4102e8bb9364a49b2b78b417b492a69d 288 Gene3D G3DSA:3.30.2010.10 68 161 4.0E-38 T 14-10-2018 BJD94_05470 4102e8bb9364a49b2b78b417b492a69d 288 Hamap MF_00188 Protease HtpX [htpX]. 1 288 25.428 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BJD94_05470 4102e8bb9364a49b2b78b417b492a69d 288 Pfam PF01435 Peptidase family M48 78 287 9.6E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD94_07370 2691196d5bc02712a274a6b5ae15359b 372 SUPERFAMILY SSF56935 44 372 1.07E-39 T 14-10-2018 BJD94_07370 2691196d5bc02712a274a6b5ae15359b 372 Gene3D G3DSA:2.40.160.10 44 372 1.8E-42 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_07370 2691196d5bc02712a274a6b5ae15359b 372 Pfam PF13609 Gram-negative porin 10 342 6.5E-34 T 14-10-2018 BJD94_13235 c292176a5b2d5f449bf778c398b3cfbd 136 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.8E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane BJD94_13235 c292176a5b2d5f449bf778c398b3cfbd 136 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 5.1E-20 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane BJD94_15470 0e57e86884458783f2926ca13088b68e 70 SMART SM00357 6 70 6.4E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 PIRSF PIRSF002599 1 70 4.6E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 Gene3D G3DSA:2.40.50.140 2 70 6.4E-31 T 14-10-2018 BJD94_15470 0e57e86884458783f2926ca13088b68e 70 SUPERFAMILY SSF50249 3 69 4.07E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_20155 92ed657af36de18cf4af46ae03e2624e 300 Gene3D G3DSA:1.10.287.950 23 300 6.0E-45 T 14-10-2018 BJD94_20155 92ed657af36de18cf4af46ae03e2624e 300 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 88 271 6.1E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20155 92ed657af36de18cf4af46ae03e2624e 300 SMART SM00283 49 300 6.8E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_20155 92ed657af36de18cf4af46ae03e2624e 300 SUPERFAMILY SSF58104 43 296 6.15E-46 T 14-10-2018 BJD94_07730 5f63cee673d416530905bd55e643c85b 269 PIRSF PIRSF002854 1 269 1.7E-100 T 14-10-2018 IPR004872 Lipoprotein NlpA family BJD94_07730 5f63cee673d416530905bd55e643c85b 269 Gene3D G3DSA:3.40.190.10 115 219 9.2E-95 T 14-10-2018 BJD94_07730 5f63cee673d416530905bd55e643c85b 269 Pfam PF03180 NLPA lipoprotein 33 269 2.4E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family BJD94_07730 5f63cee673d416530905bd55e643c85b 269 Gene3D G3DSA:3.40.190.10 34 263 9.2E-95 T 14-10-2018 BJD94_07730 5f63cee673d416530905bd55e643c85b 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 3.8E-124 T 14-10-2018 IPR004872 Lipoprotein NlpA family BJD94_07730 5f63cee673d416530905bd55e643c85b 269 SUPERFAMILY SSF53850 32 269 8.95E-81 T 14-10-2018 BJD94_09815 3f16209064057c8aae87abe0bb031afc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09815 3f16209064057c8aae87abe0bb031afc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09815 3f16209064057c8aae87abe0bb031afc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.871 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BJD94_09815 3f16209064057c8aae87abe0bb031afc 101 Gene3D G3DSA:4.10.830.10 41 101 8.4E-23 T 14-10-2018 BJD94_09815 3f16209064057c8aae87abe0bb031afc 101 SUPERFAMILY SSF57716 2 101 5.99E-37 T 14-10-2018 BJD94_15265 104c86fff2d95546e3cbb065579097ba 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 281 1.3E-26 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_15265 104c86fff2d95546e3cbb065579097ba 297 SUPERFAMILY SSF161111 7 214 2.75E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_15265 104c86fff2d95546e3cbb065579097ba 297 Pfam PF01545 Cation efflux family 14 214 4.0E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_15265 104c86fff2d95546e3cbb065579097ba 297 Gene3D G3DSA:1.20.1510.10 9 214 7.8E-21 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_16215 180b2b178b0674c6d6a4c2d88ae77f11 255 Gene3D G3DSA:1.10.10.10 1 79 1.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16215 180b2b178b0674c6d6a4c2d88ae77f11 255 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 78 8.9E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BJD94_16215 180b2b178b0674c6d6a4c2d88ae77f11 255 SUPERFAMILY SSF46689 7 75 8.06E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15480 8e6534e1c953f34cbd4ad1ff2844a118 322 Gene3D G3DSA:1.20.58.1130 9 205 1.1E-89 T 14-10-2018 BJD94_15480 8e6534e1c953f34cbd4ad1ff2844a118 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 3.0E-71 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 BJD94_15480 8e6534e1c953f34cbd4ad1ff2844a118 322 Gene3D G3DSA:1.20.1420.30 35 311 1.1E-89 T 14-10-2018 BJD94_15480 8e6534e1c953f34cbd4ad1ff2844a118 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 1.0E-22 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BJD94_15480 8e6534e1c953f34cbd4ad1ff2844a118 322 Pfam PF01699 Sodium/calcium exchanger protein 174 315 6.0E-32 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 Gene3D G3DSA:3.40.50.10490 1 220 3.1E-81 T 14-10-2018 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 Pfam PF13580 SIS domain 44 166 5.7E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 9.8E-134 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 SUPERFAMILY SSF53697 8 250 1.05E-68 T 14-10-2018 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 Gene3D G3DSA:1.10.8.1080 221 299 3.8E-30 T 14-10-2018 BJD94_17840 028edff687a9f914e830b3231a46b2ef 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.694 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 Pfam PF00012 Hsp70 protein 17 345 4.4E-17 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 Gene3D G3DSA:3.30.420.40 17 214 5.7E-35 T 14-10-2018 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 SUPERFAMILY SSF53067 222 480 6.89E-27 T 14-10-2018 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 SUPERFAMILY SSF53067 15 208 5.18E-27 T 14-10-2018 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 Gene3D G3DSA:3.30.420.40 220 344 5.7E-35 T 14-10-2018 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 PRINTS PR00301 70kDa heat shock protein signature 15 28 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 PRINTS PR00301 70kDa heat shock protein signature 166 186 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 PRINTS PR00301 70kDa heat shock protein signature 233 243 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 19 26 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD94_02275 3e75c795a7d4e87b04afc2aa9225cbb9 635 Gene3D G3DSA:3.90.640.10 263 343 5.7E-35 T 14-10-2018 BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 325 1.5E-50 T 14-10-2018 IPR000160 GGDEF domain BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF55073 169 327 1.41E-48 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.40.50.2300 1 141 2.9E-31 T 14-10-2018 BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00267 153 329 5.3E-64 T 14-10-2018 IPR000160 GGDEF domain BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00448 5 119 8.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF52172 3 144 5.69E-34 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00072 Response regulator receiver domain 8 112 7.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.30.70.270 149 327 1.8E-59 T 14-10-2018 BJD94_21860 009d73c8c9e866ebfa1f9583728c45f2 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 327 5.7E-53 T 14-10-2018 IPR000160 GGDEF domain BJD94_13805 af83e348d3b1af9aeb2ecbf9f9549a38 167 Pfam PF02464 Competence-damaged protein 6 158 6.9E-56 T 14-10-2018 IPR008136 CinA, C-terminal BJD94_13805 af83e348d3b1af9aeb2ecbf9f9549a38 167 SUPERFAMILY SSF142433 3 160 8.24E-55 T 14-10-2018 IPR036653 CinA-like, C-terminal BJD94_13805 af83e348d3b1af9aeb2ecbf9f9549a38 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 2.1E-47 T 14-10-2018 IPR008136 CinA, C-terminal BJD94_13805 af83e348d3b1af9aeb2ecbf9f9549a38 167 Gene3D G3DSA:3.90.950.20 1 162 7.1E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 Pfam PF00920 Dehydratase family 68 594 1.3E-147 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 SUPERFAMILY SSF52016 418 596 2.59E-51 T 14-10-2018 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 Gene3D G3DSA:3.50.30.80 418 561 7.0E-48 T 14-10-2018 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 SUPERFAMILY SSF143975 3 417 8.89E-132 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 6.3E-250 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 BJD94_11450 a9413d4da9432ee2b8e43689c8729cb9 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.284 T 14-10-2018 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 5.7E-42 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Gene3D G3DSA:3.50.50.60 265 663 7.4E-133 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Gene3D G3DSA:3.40.50.150 7 253 1.2E-103 T 14-10-2018 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 SUPERFAMILY SSF51905 266 663 1.36E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 6.1E-45 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 3.1E-153 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Gene3D G3DSA:3.30.9.10 349 573 7.4E-133 T 14-10-2018 BJD94_00840 db0fa0632c4b61685c4a63f7396f7a94 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.623 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 SUPERFAMILY SSF51366 19 272 3.41E-80 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 272 4.0E-97 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 SUPERFAMILY SSF51366 278 473 7.53E-56 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 278 469 2.4E-55 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 86 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 276 475 30.522 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Gene3D G3DSA:3.20.20.70 277 469 9.7E-179 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Gene3D G3DSA:3.20.20.70 26 276 9.7E-179 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_06005 5a95ad85d4cbdd2ffe91cbd9050376d2 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 21 275 35.039 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 Pfam PF00344 SecY translocase 76 418 5.6E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 PIRSF PIRSF004557 10 442 1.4E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 Gene3D G3DSA:1.10.3370.10 10 430 1.9E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 SUPERFAMILY SSF103491 15 425 7.06E-131 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.188 T 14-10-2018 IPR026593 Protein translocase subunit SecY BJD94_09780 bdad69aaaab1403a5c9fcb34ac7b740f 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.7E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 SUPERFAMILY SSF55874 533 678 9.17E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 680 4.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 Gene3D G3DSA:3.30.450.20 54 169 8.9E-10 T 14-10-2018 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 431 5.4E-10 T 14-10-2018 IPR000014 PAS domain BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 SUPERFAMILY SSF55785 321 433 8.54E-12 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 Gene3D G3DSA:1.10.287.130 441 527 1.6E-12 T 14-10-2018 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 SMART SM00387 572 682 3.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 660 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 639 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 SMART SM00086 384 424 0.0025 T 14-10-2018 IPR001610 PAC motif BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 SUPERFAMILY SSF47384 451 527 1.04E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 Gene3D G3DSA:3.30.450.20 311 440 5.2E-12 T 14-10-2018 BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 Gene3D G3DSA:3.30.565.10 533 683 2.7E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_17350 207d0fe1eada2196f86dbffd4461d346 686 PIRSF PIRSF036431 1 686 2.3E-144 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) BJD94_04030 83aee72b43a5d678d768efaa3901b90a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04030 83aee72b43a5d678d768efaa3901b90a 477 Gene3D G3DSA:1.20.210.10 6 475 3.5E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04030 83aee72b43a5d678d768efaa3901b90a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.1E-229 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BJD94_04030 83aee72b43a5d678d768efaa3901b90a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 7.9E-116 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04030 83aee72b43a5d678d768efaa3901b90a 477 SUPERFAMILY SSF81442 11 469 1.09E-121 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 SUPERFAMILY SSF46626 239 323 3.73E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Gene3D G3DSA:1.20.58.1490 1 94 7.5E-35 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 SUPERFAMILY SSF46626 55 238 2.72E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Gene3D G3DSA:1.10.760.10 143 318 4.7E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 3.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 228 8.5E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Gene3D G3DSA:1.10.760.10 209 295 4.7E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 PRINTS PR00605 Class IC cytochrome C signature 206 228 1.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 PRINTS PR00605 Class IC cytochrome C signature 164 175 1.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 2.7E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 PIRSF PIRSF000006 1 322 9.0E-109 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BJD94_04015 c4eed74e3759cf356ab914bb52747ee5 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 322 2.3E-58 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Gene3D G3DSA:1.25.40.880 387 528 4.4E-59 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 SUPERFAMILY SSF55718 538 655 9.42E-29 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Gene3D G3DSA:3.60.15.30 27 386 1.3E-149 T 14-10-2018 BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 527 3.3E-57 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Pfam PF00753 Metallo-beta-lactamase superfamily 125 351 4.8E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 SUPERFAMILY SSF56281 30 529 4.9E-147 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Pfam PF14864 Alkyl sulfatase C-terminal 536 655 7.2E-31 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 SMART SM00849 129 351 2.8E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_17555 227dd2b115efb08e6c3f4390d183b851 655 Gene3D G3DSA:3.30.1050.10 531 655 5.5E-33 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BJD94_01520 67c441ebab561413a6ce6a3ba5784249 355 Pfam PF06519 TolA C-terminal 254 352 7.7E-29 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BJD94_01520 67c441ebab561413a6ce6a3ba5784249 355 SUPERFAMILY SSF74653 265 355 2.16E-15 T 14-10-2018 BJD94_01520 67c441ebab561413a6ce6a3ba5784249 355 TIGRFAM TIGR02794 tolA_full: protein TolA 14 354 4.7E-84 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BJD94_01520 67c441ebab561413a6ce6a3ba5784249 355 Gene3D G3DSA:3.30.1150.10 254 353 1.6E-23 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 SUPERFAMILY SSF118215 5 406 1.31E-103 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.4E-114 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 8.3E-37 T 14-10-2018 BJD94_08010 7496e4f4f34e2fe5465bfbf1f6489b59 426 Gene3D G3DSA:1.10.3860.10 1 421 1.1E-111 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_07825 aa75b6baeaa2731cff28834dc3332e8a 167 SUPERFAMILY SSF101307 8 159 1.26E-46 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 BJD94_07825 aa75b6baeaa2731cff28834dc3332e8a 167 PIRSF PIRSF006162 5 166 6.4E-52 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BJD94_07825 aa75b6baeaa2731cff28834dc3332e8a 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 6.9E-51 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BJD94_20995 b27491db47d383917dce91aeb7967ffe 362 Pfam PF00092 von Willebrand factor type A domain 107 297 7.6E-26 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_20995 b27491db47d383917dce91aeb7967ffe 362 SUPERFAMILY SSF53300 103 300 1.63E-35 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20995 b27491db47d383917dce91aeb7967ffe 362 Gene3D G3DSA:3.40.50.410 105 304 9.9E-49 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20995 b27491db47d383917dce91aeb7967ffe 362 SMART SM00327 105 304 5.9E-25 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 Gene3D G3DSA:3.40.50.1400 180 318 3.7E-90 T 14-10-2018 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 Gene3D G3DSA:3.40.50.1400 25 335 3.7E-90 T 14-10-2018 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 Hamap MF_00323 Ferrochelatase [hemH]. 22 336 35.839 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 Pfam PF00762 Ferrochelatase 23 335 1.3E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 SUPERFAMILY SSF53800 22 335 1.96E-99 T 14-10-2018 BJD94_07105 b183d2f30d5d4679df339ba17dccde29 336 TIGRFAM TIGR00109 hemH: ferrochelatase 21 335 5.9E-101 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD94_08805 e7449b4b5ae127cdc58cb407477bbaea 317 Pfam PF03186 CobD/Cbib protein 18 291 2.2E-37 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 113 282 8.0E-57 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.236 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 Gene3D G3DSA:1.20.1640.10 105 300 7.2E-12 T 14-10-2018 BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 SUPERFAMILY SSF82866 74 293 4.45E-41 T 14-10-2018 BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 Pfam PF02355 Protein export membrane protein 111 292 1.6E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08265 d0630ba51550a4b511ffbfc222c69e61 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 1.3E-87 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD94_11735 3914b2e3c76b7ced2fadf67b5ff4d167 183 SUPERFAMILY SSF64288 11 178 4.16E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_11735 3914b2e3c76b7ced2fadf67b5ff4d167 183 Pfam PF04345 Chorismate lyase 16 182 8.6E-54 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 BJD94_11735 3914b2e3c76b7ced2fadf67b5ff4d167 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 25.017 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 BJD94_11735 3914b2e3c76b7ced2fadf67b5ff4d167 183 Gene3D G3DSA:3.40.1410.10 14 178 1.2E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.7E-222 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.1E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:1.10.8.60 335 440 5.6E-40 T 14-10-2018 BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 8.7E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM00382 49 332 7.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM01086 335 429 3.3E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 SUPERFAMILY SSF52540 3 441 1.68E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 1.5E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD94_12675 709dd45c367dd9b1524f4ccba535f0c0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.088 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BJD94_12075 c68c37686bc4fed3e7ceffba78e988cb 211 Pfam PF00929 Exonuclease 31 193 1.0E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_12075 c68c37686bc4fed3e7ceffba78e988cb 211 Gene3D G3DSA:3.30.420.10 23 200 1.1E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_12075 c68c37686bc4fed3e7ceffba78e988cb 211 SUPERFAMILY SSF53098 27 198 1.77E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_12075 c68c37686bc4fed3e7ceffba78e988cb 211 SMART SM00479 29 202 3.3E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_19380 3c27c4a1223e40910ea436b33e270fd6 269 Gene3D G3DSA:3.90.1580.10 11 269 1.6E-46 T 14-10-2018 BJD94_19380 3c27c4a1223e40910ea436b33e270fd6 269 Pfam PF03781 Sulfatase-modifying factor enzyme 1 25 266 1.7E-43 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD94_19380 3c27c4a1223e40910ea436b33e270fd6 269 SUPERFAMILY SSF56436 24 267 3.3E-53 T 14-10-2018 IPR016187 C-type lectin fold BJD94_04750 745efd20d71dab5a8e088b5c3b17c9c0 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD94_04750 745efd20d71dab5a8e088b5c3b17c9c0 402 SUPERFAMILY SSF103473 6 389 1.7E-52 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_04750 745efd20d71dab5a8e088b5c3b17c9c0 402 Gene3D G3DSA:1.20.1250.20 6 392 7.1E-47 T 14-10-2018 BJD94_04750 745efd20d71dab5a8e088b5c3b17c9c0 402 Pfam PF07690 Major Facilitator Superfamily 16 352 3.2E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Pfam PF09179 TilS substrate binding domain 248 315 2.0E-14 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Pfam PF01171 PP-loop family 22 199 2.3E-59 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 SUPERFAMILY SSF52402 14 233 6.91E-61 T 14-10-2018 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 SUPERFAMILY SSF56037 323 435 5.23E-28 T 14-10-2018 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 2.7E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 SMART SM00977 365 434 1.4E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 7.4E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Gene3D G3DSA:3.40.50.620 12 233 9.2E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 22.898 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Gene3D G3DSA:1.20.59.20 236 318 2.7E-25 T 14-10-2018 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 Pfam PF11734 TilS substrate C-terminal domain 367 432 5.5E-22 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD94_00320 a8737b1bf1cb17b764ee5d4d5c1b5608 436 SUPERFAMILY SSF82829 238 319 1.96E-22 T 14-10-2018 BJD94_03035 06fde46067639eacba100274dd1cec45 177 Gene3D G3DSA:3.30.460.10 7 177 6.7E-50 T 14-10-2018 BJD94_03035 06fde46067639eacba100274dd1cec45 177 SUPERFAMILY SSF81301 12 174 6.87E-49 T 14-10-2018 BJD94_03035 06fde46067639eacba100274dd1cec45 177 Pfam PF04229 GrpB protein 10 169 2.5E-46 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase BJD94_17210 dbd4fabc18ba0a1d35aca5bb4bf0a7b9 287 SUPERFAMILY SSF103481 39 145 3.4E-6 T 14-10-2018 BJD94_17210 dbd4fabc18ba0a1d35aca5bb4bf0a7b9 287 SUPERFAMILY SSF103481 186 284 6.93E-11 T 14-10-2018 BJD94_17210 dbd4fabc18ba0a1d35aca5bb4bf0a7b9 287 Pfam PF00892 EamA-like transporter family 154 282 5.9E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_17210 dbd4fabc18ba0a1d35aca5bb4bf0a7b9 287 Pfam PF00892 EamA-like transporter family 6 141 8.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_00165 b859e7eb83ec7859c631021110887a10 231 SUPERFAMILY SSF118196 2 225 2.35E-78 T 14-10-2018 IPR036413 YaeB-like superfamily BJD94_00165 b859e7eb83ec7859c631021110887a10 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.7E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain BJD94_00165 b859e7eb83ec7859c631021110887a10 231 Gene3D G3DSA:2.40.30.70 22 143 7.7E-46 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily BJD94_00165 b859e7eb83ec7859c631021110887a10 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site BJD94_00165 b859e7eb83ec7859c631021110887a10 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 146 2.7E-46 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain BJD94_00165 b859e7eb83ec7859c631021110887a10 231 Gene3D G3DSA:3.30.2310.10 144 227 1.7E-18 T 14-10-2018 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 SUPERFAMILY SSF55620 184 267 2.22E-10 T 14-10-2018 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 Gene3D G3DSA:3.30.1130.10 21 138 3.4E-46 T 14-10-2018 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 PIRSF PIRSF004750 6 281 2.5E-130 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.2E-49 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 Pfam PF14489 QueF-like protein 194 270 1.7E-27 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 7.8E-129 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 Gene3D G3DSA:3.30.1130.10 143 281 6.4E-62 T 14-10-2018 BJD94_07745 50efd37345a84e99461f2836d8bd8a47 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.238 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD94_05455 d80e66b80ead7b07a4a66afe02a5509f 430 SUPERFAMILY SSF51905 1 413 8.2E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_05455 d80e66b80ead7b07a4a66afe02a5509f 430 Gene3D G3DSA:3.50.50.60 1 268 2.2E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_05455 d80e66b80ead7b07a4a66afe02a5509f 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 297 5.8E-20 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD94_09875 76a5f640560395c958b798b6cd70a827 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.821 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09875 76a5f640560395c958b798b6cd70a827 200 Gene3D G3DSA:3.40.1370.10 5 200 3.1E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09875 76a5f640560395c958b798b6cd70a827 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.5E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BJD94_09875 76a5f640560395c958b798b6cd70a827 200 SUPERFAMILY SSF52166 10 199 3.53E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09875 76a5f640560395c958b798b6cd70a827 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.9E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 Gene3D G3DSA:2.30.330.10 44 136 4.0E-34 T 14-10-2018 IPR036429 SpoA-like superfamily BJD94_00630 fc353ee4257e682610decd9a1771809b 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BJD94_00630 fc353ee4257e682610decd9a1771809b 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) BJD94_00630 fc353ee4257e682610decd9a1771809b 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 14-10-2018 IPR036429 SpoA-like superfamily BJD94_08485 982d071ff04d70ac5c4282fecda0863a 334 SUPERFAMILY SSF51261 41 268 3.53E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_08485 982d071ff04d70ac5c4282fecda0863a 334 Pfam PF01551 Peptidase family M23 172 267 6.1E-30 T 14-10-2018 IPR016047 Peptidase M23 BJD94_08485 982d071ff04d70ac5c4282fecda0863a 334 Gene3D G3DSA:2.70.70.10 119 273 1.6E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_06040 3bf305312597cb4b2577e0e1801a8d89 98 Gene3D G3DSA:3.30.70.1060 1 98 4.0E-38 T 14-10-2018 BJD94_06040 3bf305312597cb4b2577e0e1801a8d89 98 SUPERFAMILY SSF54909 1 98 2.86E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_06040 3bf305312597cb4b2577e0e1801a8d89 98 Pfam PF03795 YCII-related domain 1 95 3.6E-30 T 14-10-2018 IPR005545 YCII-related BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 7.7E-215 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 Gene3D G3DSA:3.30.470.20 130 292 3.7E-14 T 14-10-2018 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.442 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 SUPERFAMILY SSF56104 14 345 7.85E-69 T 14-10-2018 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 Gene3D G3DSA:3.30.200.20 13 129 8.3E-24 T 14-10-2018 BJD94_04840 a6e969b39ff891f93869d6616f00a402 367 Pfam PF01259 SAICAR synthetase 22 293 9.5E-47 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 6.6E-74 T 14-10-2018 IPR017757 Transcriptional repressor BetI BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 SUPERFAMILY SSF46689 5 77 9.75E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 95.266 T 14-10-2018 IPR017757 Transcriptional repressor BetI BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 SUPERFAMILY SSF48498 86 192 2.78E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 Gene3D G3DSA:1.10.357.10 6 195 3.4E-43 T 14-10-2018 BJD94_20275 68bdf16d1ed3a798108be1ddb827987e 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 2.7E-31 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal BJD94_03950 725baec79dbe7fcc5eebdd112deb021e 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 7.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_03950 725baec79dbe7fcc5eebdd112deb021e 256 SUPERFAMILY SSF161098 4 254 4.67E-54 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_03950 725baec79dbe7fcc5eebdd112deb021e 256 Gene3D G3DSA:1.10.3720.10 4 256 3.8E-47 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_03640 ab56800de7c013fbd1020438a1b75a8f 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 3.4E-23 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 BJD94_03640 ab56800de7c013fbd1020438a1b75a8f 90 Gene3D G3DSA:1.20.890.30 50 90 4.1E-22 T 14-10-2018 BJD94_03640 ab56800de7c013fbd1020438a1b75a8f 90 SUPERFAMILY SSF47598 6 82 4.34E-19 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD94_03640 ab56800de7c013fbd1020438a1b75a8f 90 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-30 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 56 306 6.7E-80 T 14-10-2018 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.6E-40 T 14-10-2018 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF47413 1 59 2.44E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 160 289 6.7E-80 T 14-10-2018 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 SMART SM00354 1 71 8.8E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF53822 60 332 3.53E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_12690 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:1.10.260.40 1 55 3.5E-26 T 14-10-2018 BJD94_06990 256118d894fd8069c145d03aa8402345 429 SUPERFAMILY SSF48256 4 428 1.7E-169 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 Gene3D G3DSA:1.10.580.10 57 411 4.9E-150 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD94_06990 256118d894fd8069c145d03aa8402345 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.2E-238 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PIRSF PIRSF001369 38 429 4.2E-174 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type BJD94_06990 256118d894fd8069c145d03aa8402345 429 Gene3D G3DSA:2.20.28.60 1 50 1.8E-26 T 14-10-2018 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 241 269 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 296 316 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 379 393 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 219 234 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 165 178 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 PRINTS PR00143 Citrate synthase signature 359 375 1.1E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 Gene3D G3DSA:1.10.230.10 268 376 4.9E-150 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BJD94_06990 256118d894fd8069c145d03aa8402345 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.1E-134 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 BJD94_06990 256118d894fd8069c145d03aa8402345 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 Gene3D G3DSA:2.60.120.10 3 136 4.7E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_02065 6e54127d025eff7ded8074c06639156f 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_02065 6e54127d025eff7ded8074c06639156f 451 Gene3D G3DSA:3.30.565.10 291 440 6.0E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_02065 6e54127d025eff7ded8074c06639156f 451 SUPERFAMILY SSF51206 3 133 1.09E-14 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_02065 6e54127d025eff7ded8074c06639156f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 SMART SM00387 329 440 5.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_02065 6e54127d025eff7ded8074c06639156f 451 SUPERFAMILY SSF55874 291 438 3.41E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_02065 6e54127d025eff7ded8074c06639156f 451 Pfam PF00027 Cyclic nucleotide-binding domain 22 100 4.9E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_02065 6e54127d025eff7ded8074c06639156f 451 Gene3D G3DSA:1.10.287.130 145 288 9.0E-9 T 14-10-2018 BJD94_02065 6e54127d025eff7ded8074c06639156f 451 SMART SM00100 2 124 0.0086 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD94_10460 35d012619557960fe756a532f91ed987 200 SUPERFAMILY SSF54523 12 90 9.42E-8 T 14-10-2018 BJD94_10460 35d012619557960fe756a532f91ed987 200 Gene3D G3DSA:3.55.40.10 39 199 1.2E-47 T 14-10-2018 BJD94_10460 35d012619557960fe756a532f91ed987 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 186 1.2E-16 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_10460 35d012619557960fe756a532f91ed987 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 4.4E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10460 35d012619557960fe756a532f91ed987 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 163 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_10460 35d012619557960fe756a532f91ed987 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 7 21 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_10460 35d012619557960fe756a532f91ed987 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 22 36 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD94_10460 35d012619557960fe756a532f91ed987 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_10460 35d012619557960fe756a532f91ed987 200 Pfam PF12019 Type II transport protein GspH 47 185 6.8E-11 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD94_00810 382a0eee63ceb8f994cf31aaeb4ba1a6 176 SMART SM00463 94 172 7.9E-16 T 14-10-2018 IPR002625 Smr domain BJD94_00810 382a0eee63ceb8f994cf31aaeb4ba1a6 176 Gene3D G3DSA:3.30.1370.110 49 175 1.3E-27 T 14-10-2018 BJD94_00810 382a0eee63ceb8f994cf31aaeb4ba1a6 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 40.009 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 BJD94_00810 382a0eee63ceb8f994cf31aaeb4ba1a6 176 SUPERFAMILY SSF160443 95 171 1.83E-11 T 14-10-2018 IPR036063 Smr domain superfamily BJD94_00810 382a0eee63ceb8f994cf31aaeb4ba1a6 176 Pfam PF01713 Smr domain 97 171 1.2E-17 T 14-10-2018 IPR002625 Smr domain BJD94_18745 6fc0f98aa73a542bf03131e761578ff5 251 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 22 245 6.9E-87 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family BJD94_06995 21f268ac85d0338925b858c63456a80a 252 Gene3D G3DSA:3.40.1390.30 14 237 2.7E-81 T 14-10-2018 BJD94_06995 21f268ac85d0338925b858c63456a80a 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 6.1E-59 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BJD94_06995 21f268ac85d0338925b858c63456a80a 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 4.9E-67 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BJD94_06995 21f268ac85d0338925b858c63456a80a 252 Gene3D G3DSA:3.40.1390.30 97 223 2.7E-81 T 14-10-2018 BJD94_06995 21f268ac85d0338925b858c63456a80a 252 SUPERFAMILY SSF102705 1 251 1.1E-81 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BJD94_21020 07ae8ef2d1423dde0481fd78815be11d 261 SUPERFAMILY SSF56436 36 260 8.95E-59 T 14-10-2018 IPR016187 C-type lectin fold BJD94_21020 07ae8ef2d1423dde0481fd78815be11d 261 Gene3D G3DSA:3.90.1580.10 30 258 7.0E-58 T 14-10-2018 BJD94_21020 07ae8ef2d1423dde0481fd78815be11d 261 Pfam PF03781 Sulfatase-modifying factor enzyme 1 36 258 2.3E-45 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 Gene3D G3DSA:1.10.10.10 3 89 8.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 4.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20620 d56bfd4007f30f78d27f5ed49089df50 283 SUPERFAMILY SSF46785 6 110 6.96E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_02035 8666d1841e012916965c8a86544dd6ff 341 Pfam PF05128 Domain of unknown function (DUF697) 176 334 3.9E-52 T 14-10-2018 IPR021147 Protein of unknown function DUF697 BJD94_02035 8666d1841e012916965c8a86544dd6ff 341 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 341 36.247 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 BJD94_02035 8666d1841e012916965c8a86544dd6ff 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 60 334 4.3E-80 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 Gene3D G3DSA:1.10.10.10 10 98 6.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 Pfam PF03466 LysR substrate binding domain 107 307 2.5E-22 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 Gene3D G3DSA:3.40.190.10 101 304 2.2E-69 T 14-10-2018 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 SUPERFAMILY SSF53850 100 306 4.89E-40 T 14-10-2018 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 SUPERFAMILY SSF46785 15 95 5.77E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 Gene3D G3DSA:3.40.190.10 180 279 2.2E-69 T 14-10-2018 BJD94_11240 6a635e60a9b81c35faef7f1dc1d94f36 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 7.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 4.2E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 SUPERFAMILY SSF53474 412 652 1.23E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 6 401 1.4E-116 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 Gene3D G3DSA:2.130.10.120 70 403 3.5E-243 T 14-10-2018 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 Gene3D G3DSA:3.40.50.1820 12 642 3.5E-243 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 SUPERFAMILY SSF50993 2 407 2.88E-93 T 14-10-2018 BJD94_16435 bd86639543c510a70e62f8b4377c690f 677 Pfam PF00326 Prolyl oligopeptidase family 459 673 1.3E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Gene3D G3DSA:3.40.710.10 251 629 4.5E-93 T 14-10-2018 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 SUPERFAMILY SSF56519 58 254 8.11E-56 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 1.6E-50 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Gene3D G3DSA:3.30.1390.30 87 162 9.4E-53 T 14-10-2018 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 SUPERFAMILY SSF56601 256 620 9.45E-95 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 6.5E-76 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.474 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.8E-239 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD94_07630 f2c0af2592decb30b024bd91fa0bc9a9 630 Gene3D G3DSA:3.90.1310.10 66 250 9.4E-53 T 14-10-2018 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 SUPERFAMILY SSF53790 33 278 5.5E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 Gene3D G3DSA:3.30.950.10 153 291 7.2E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 Gene3D G3DSA:3.40.1010.10 35 152 7.0E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 117 150 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 248 1.9E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD94_09710 ac968bdef67ff70d9ba42a0368cb4bcf 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 2.0E-93 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD94_02570 6f882aa8860e41d121e2ec065ac13513 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 BJD94_02570 6f882aa8860e41d121e2ec065ac13513 229 PIRSF PIRSF028111 1 229 2.4E-86 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 BJD94_02325 9240abb4e843f1be033824bace4b6a4c 128 Pfam PF01478 Type IV leader peptidase family 2 94 4.3E-9 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BJD94_11200 cb91d0626f3033acec61d5c39ae6a8c3 418 SUPERFAMILY SSF53383 13 410 4.54E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_11200 cb91d0626f3033acec61d5c39ae6a8c3 418 Pfam PF00155 Aminotransferase class I and II 67 399 1.9E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_11200 cb91d0626f3033acec61d5c39ae6a8c3 418 Gene3D G3DSA:3.40.640.10 1 416 2.5E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 264 3.7E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 Gene3D G3DSA:3.40.50.300 4 308 1.0E-80 T 14-10-2018 BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 SMART SM00382 39 233 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 Pfam PF00005 ABC transporter 30 184 7.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_17980 6df4afe8b3e8466fbc39aed0dbd354ce 310 SUPERFAMILY SSF52540 5 254 7.66E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17610 507c5d336c537b4f54be33560f04c3cf 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.988 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_17610 507c5d336c537b4f54be33560f04c3cf 175 SUPERFAMILY SSF55068 3 166 1.28E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_17610 507c5d336c537b4f54be33560f04c3cf 175 Gene3D G3DSA:3.30.1060.10 1 163 3.1E-67 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_17610 507c5d336c537b4f54be33560f04c3cf 175 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 6.8E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_17610 507c5d336c537b4f54be33560f04c3cf 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 8.6E-56 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_17330 a7fb1a7d97725270ac525b920a1f0888 706 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 1.1E-208 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ BJD94_17330 a7fb1a7d97725270ac525b920a1f0888 706 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 611 2.4E-72 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BJD94_05445 d036142577998de022e79836444604bb 418 Gene3D G3DSA:3.40.50.150 149 418 5.6E-102 T 14-10-2018 BJD94_05445 d036142577998de022e79836444604bb 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 143 411 8.8E-85 T 14-10-2018 BJD94_05445 d036142577998de022e79836444604bb 418 PIRSF PIRSF003085 22 418 2.5E-122 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 BJD94_05445 d036142577998de022e79836444604bb 418 SUPERFAMILY SSF53335 21 371 3.84E-91 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_10410 60035d0fe70b19631db02340bebdc57f 236 Pfam PF00156 Phosphoribosyl transferase domain 138 234 1.3E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_10410 60035d0fe70b19631db02340bebdc57f 236 SUPERFAMILY SSF53271 53 235 2.02E-37 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_10410 60035d0fe70b19631db02340bebdc57f 236 Gene3D G3DSA:3.40.50.2020 86 236 1.7E-16 T 14-10-2018 BJD94_07275 956abf018f427834145169ada1120d37 259 Pfam PF02107 Flagellar L-ring protein 80 256 8.6E-58 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_07275 956abf018f427834145169ada1120d37 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.819 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 Pfam PF00128 Alpha amylase, catalytic domain 236 606 2.1E-53 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 Gene3D G3DSA:3.20.20.80 427 653 2.5E-39 T 14-10-2018 BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 SUPERFAMILY SSF51445 189 655 1.85E-96 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 PIRSF PIRSF036917 1 685 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 SMART SM00642 203 646 2.3E-97 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_16910 f92cb20ce546f4a9af00408f025b207d 687 Gene3D G3DSA:3.20.20.80 193 420 1.3E-56 T 14-10-2018 BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 Gene3D G3DSA:3.40.50.300 4 211 2.0E-63 T 14-10-2018 BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.2E-63 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 Pfam PF02223 Thymidylate kinase 9 199 4.2E-58 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 SUPERFAMILY SSF52540 1 210 1.67E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD94_05690 a82e879f3cd9ec68c075cb671021ecfd 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.317 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD94_09180 b7920d4f862f922294adee57ba01e1ad 345 Pfam PF13730 Helix-turn-helix domain 120 175 7.3E-6 T 14-10-2018 BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 5.1E-26 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 SUPERFAMILY SSF56935 30 712 5.19E-115 T 14-10-2018 BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 Gene3D G3DSA:2.170.130.10 27 157 1.0E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 27 712 4.6E-197 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 Pfam PF00593 TonB dependent receptor 257 711 5.9E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 Gene3D G3DSA:2.40.170.20 168 712 7.6E-113 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_21510 1e952dec4e6901b226d6095150620fa7 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 712 3.0E-197 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BJD94_01865 4734565279859fef6c190e2668374424 518 SUPERFAMILY SSF47090 193 271 2.67E-14 T 14-10-2018 IPR036365 PGBD-like superfamily BJD94_01865 4734565279859fef6c190e2668374424 518 Pfam PF01471 Putative peptidoglycan binding domain 226 263 8.5E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like BJD94_01865 4734565279859fef6c190e2668374424 518 Pfam PF03734 L,D-transpeptidase catalytic domain 291 455 8.8E-27 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BJD94_01865 4734565279859fef6c190e2668374424 518 SUPERFAMILY SSF141523 289 450 1.7E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 SUPERFAMILY SSF53098 17 228 1.08E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Hamap MF_01899 Ribonuclease D [rnd]. 22 389 42.664 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Gene3D G3DSA:1.10.150.80 214 312 6.0E-18 T 14-10-2018 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 TIGRFAM TIGR01388 rnd: ribonuclease D 24 389 5.9E-142 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 SMART SM00474 22 190 1.2E-45 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Gene3D G3DSA:1.10.150.80 313 390 5.7E-25 T 14-10-2018 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Pfam PF00570 HRDC domain 232 298 1.6E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 SUPERFAMILY SSF47819 315 390 1.11E-19 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Gene3D G3DSA:3.30.420.10 20 213 2.1E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 Pfam PF01612 3'-5' exonuclease 22 189 9.3E-42 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD94_06855 8bad35415d5f4e917d6d12ced373b422 390 SUPERFAMILY SSF47819 213 320 1.41E-23 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD94_19050 b07b03c03701fbc0d5f48706ee9bc979 543 Pfam PF04231 Endonuclease I 300 535 4.1E-101 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 BJD94_19050 b07b03c03701fbc0d5f48706ee9bc979 543 SUPERFAMILY SSF49785 23 164 4.76E-29 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_19050 b07b03c03701fbc0d5f48706ee9bc979 543 Pfam PF02018 Carbohydrate binding domain 21 135 2.0E-9 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 BJD94_19050 b07b03c03701fbc0d5f48706ee9bc979 543 SUPERFAMILY SSF54060 296 535 4.47E-49 T 14-10-2018 BJD94_19050 b07b03c03701fbc0d5f48706ee9bc979 543 Gene3D G3DSA:2.60.120.260 22 168 1.1E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_01875 d007c5997a698ef3d914167aa4ab5441 218 SMART SM00849 14 195 1.4E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_01875 d007c5997a698ef3d914167aa4ab5441 218 Gene3D G3DSA:3.60.15.10 3 213 4.2E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_01875 d007c5997a698ef3d914167aa4ab5441 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 4.3E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_01875 d007c5997a698ef3d914167aa4ab5441 218 SUPERFAMILY SSF56281 4 211 2.03E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Gene3D G3DSA:3.40.120.10 1 171 3.6E-46 T 14-10-2018 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 2.4E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 465 1.4E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Gene3D G3DSA:3.40.120.10 172 365 2.0E-59 T 14-10-2018 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 SUPERFAMILY SSF55957 373 460 1.83E-17 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 2.6E-37 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 SUPERFAMILY SSF53738 250 379 2.67E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Gene3D G3DSA:3.30.310.50 369 469 6.5E-16 T 14-10-2018 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Gene3D G3DSA:3.40.120.10 263 368 2.0E-59 T 14-10-2018 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 SUPERFAMILY SSF53738 2 187 3.73E-40 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_14150 ee91f4becf8eb0df8884126b555a6f6f 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.7E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD94_16675 a226cff065f26ee3d95715edae2cf3ad 685 SUPERFAMILY SSF56935 47 685 1.21E-94 T 14-10-2018 BJD94_16675 a226cff065f26ee3d95715edae2cf3ad 685 Pfam PF00593 TonB dependent receptor 296 683 6.2E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_16675 a226cff065f26ee3d95715edae2cf3ad 685 Gene3D G3DSA:2.40.170.20 57 685 1.5E-93 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_16675 a226cff065f26ee3d95715edae2cf3ad 685 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 3.4E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_05465 6ed3e4027733df5950b5412884dea7df 139 Pfam PF12680 SnoaL-like domain 8 108 9.2E-13 T 14-10-2018 IPR037401 SnoaL-like domain BJD94_05465 6ed3e4027733df5950b5412884dea7df 139 Gene3D G3DSA:3.10.450.50 5 124 1.5E-22 T 14-10-2018 BJD94_05465 6ed3e4027733df5950b5412884dea7df 139 SUPERFAMILY SSF54427 8 125 1.24E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily BJD94_12650 9ec9227a04782d67d4d99dbb01520bfa 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.6E-6 T 14-10-2018 BJD94_12650 9ec9227a04782d67d4d99dbb01520bfa 208 SUPERFAMILY SSF46785 6 183 1.78E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_12650 9ec9227a04782d67d4d99dbb01520bfa 208 Gene3D G3DSA:1.10.10.10 2 85 2.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16895 b7526fdebf2ca3a5956d02ff6ce5a0e0 155 Pfam PF07670 Nucleoside recognition 31 124 2.0E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Pfam PF01103 Surface antigen 264 568 8.1E-27 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Gene3D G3DSA:3.10.20.310 24 95 8.7E-6 T 14-10-2018 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Pfam PF17243 POTRA domain TamA domain 1 26 91 1.6E-7 T 14-10-2018 IPR035243 TamA, POTRA domain 1 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Gene3D G3DSA:2.40.160.50 261 568 5.7E-83 T 14-10-2018 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Gene3D G3DSA:3.10.20.310 97 183 1.4E-25 T 14-10-2018 BJD94_16995 e1c14548b05c6343fcfe0618c8185bc9 568 Gene3D G3DSA:3.10.20.310 184 260 1.3E-13 T 14-10-2018 BJD94_02430 d225963b86c4a33f0e5ba84ed849c348 401 Gene3D G3DSA:1.20.1720.10 10 385 9.0E-99 T 14-10-2018 BJD94_02430 d225963b86c4a33f0e5ba84ed849c348 401 Pfam PF07690 Major Facilitator Superfamily 15 354 7.6E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_02430 d225963b86c4a33f0e5ba84ed849c348 401 SUPERFAMILY SSF103473 9 389 8.89E-59 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_02430 d225963b86c4a33f0e5ba84ed849c348 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 8.3E-61 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD94_15445 8261bc4d074e51b5ebf9a6754e0a92f2 534 Gene3D G3DSA:3.90.226.10 1 268 4.0E-91 T 14-10-2018 BJD94_15445 8261bc4d074e51b5ebf9a6754e0a92f2 534 SUPERFAMILY SSF52096 25 267 4.1E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_15445 8261bc4d074e51b5ebf9a6754e0a92f2 534 SUPERFAMILY SSF52096 237 517 8.14E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_15445 8261bc4d074e51b5ebf9a6754e0a92f2 534 Pfam PF01039 Carboxyl transferase domain 48 523 2.8E-143 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BJD94_15445 8261bc4d074e51b5ebf9a6754e0a92f2 534 Gene3D G3DSA:3.90.226.10 273 534 1.3E-97 T 14-10-2018 BJD94_21855 a6d92fe6f98c664bf2567727b790311a 193 Pfam PF01339 CheB methylesterase 11 186 1.1E-55 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD94_21855 a6d92fe6f98c664bf2567727b790311a 193 Gene3D G3DSA:3.40.50.180 2 192 8.3E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_21855 a6d92fe6f98c664bf2567727b790311a 193 SUPERFAMILY SSF52738 6 191 1.83E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 Pfam PF13490 Putative zinc-finger 9 37 4.5E-6 T 14-10-2018 IPR027383 Putative zinc-finger BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 Pfam PF12973 ChrR Cupin-like domain 126 196 1.8E-14 T 14-10-2018 IPR025979 ChrR-like cupin domain BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 SUPERFAMILY SSF51182 112 206 1.29E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 Gene3D G3DSA:2.60.120.10 110 200 9.3E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 Gene3D G3DSA:1.10.10.1320 1 108 4.5E-16 T 14-10-2018 BJD94_00045 cd2da354d03ae44212a06e4dbe53b29b 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 219 6.5E-90 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 Pfam PF13490 Putative zinc-finger 9 37 4.5E-6 T 14-10-2018 IPR027383 Putative zinc-finger BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 Pfam PF12973 ChrR Cupin-like domain 126 196 1.8E-14 T 14-10-2018 IPR025979 ChrR-like cupin domain BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 SUPERFAMILY SSF51182 112 206 1.29E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 Gene3D G3DSA:2.60.120.10 110 200 9.3E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 Gene3D G3DSA:1.10.10.1320 1 108 4.5E-16 T 14-10-2018 BJD94_14825 cd2da354d03ae44212a06e4dbe53b29b 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 219 6.5E-90 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 SUPERFAMILY SSF52304 4 145 3.01E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 7.8E-64 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 Gene3D G3DSA:3.40.50.9100 1 149 2.8E-66 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 149 6.0E-77 T 14-10-2018 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.696 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 Pfam PF01220 Dehydroquinase class II 6 142 2.7E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 PIRSF PIRSF001399 3 149 1.8E-58 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_12065 6ca8f10cd0583b08f3d5864c25ef494f 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 Gene3D G3DSA:3.40.309.10 255 443 6.5E-177 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 Gene3D G3DSA:3.40.605.10 15 466 6.5E-177 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 24 469 8.6E-207 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 Pfam PF00171 Aldehyde dehydrogenase family 17 470 2.7E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 SUPERFAMILY SSF53720 5 474 2.49E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_18400 5e2213ca2ead609275045ae3f22044ae 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_12545 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 55 6.6E-20 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 BJD94_12545 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 62 4.8E-32 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 BJD94_20530 32fbfa9417b308aa8781eb95892f6fdc 114 Gene3D G3DSA:3.90.1150.30 2 114 1.9E-41 T 14-10-2018 IPR038056 YjbR-like superfamily BJD94_20530 32fbfa9417b308aa8781eb95892f6fdc 114 Pfam PF04237 YjbR 17 103 6.5E-25 T 14-10-2018 IPR007351 Uncharacterised protein YjbR BJD94_20530 32fbfa9417b308aa8781eb95892f6fdc 114 SUPERFAMILY SSF142906 1 114 4.58E-37 T 14-10-2018 IPR038056 YjbR-like superfamily BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.5E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Gene3D G3DSA:1.10.287.1040 4 77 1.3E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 3.0E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 9.0E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.346 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 PIRSF PIRSF006488 1 77 1.3E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD94_07810 de2b79ed26cf3eb87de5bd2f0b015b1b 80 SUPERFAMILY SSF116842 2 72 4.71E-21 T 14-10-2018 BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 SUPERFAMILY SSF53850 90 279 1.39E-17 T 14-10-2018 BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 Pfam PF03466 LysR substrate binding domain 90 276 1.3E-12 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 Gene3D G3DSA:3.40.190.290 90 281 3.1E-5 T 14-10-2018 BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 Gene3D G3DSA:1.10.10.10 2 87 5.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08820 2f9dd1646cc3bf1f58c138a495c7e7b5 281 SUPERFAMILY SSF46785 3 77 2.72E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_04665 0e1ec35404762b85b0290f28e00dd2aa 263 SUPERFAMILY SSF53850 37 244 2.06E-13 T 14-10-2018 BJD94_15810 9540b757fd65128999e810dd5ad27557 140 Gene3D G3DSA:2.20.25.10 1 43 1.5E-22 T 14-10-2018 BJD94_15810 9540b757fd65128999e810dd5ad27557 140 Pfam PF02566 OsmC-like protein 38 133 6.0E-18 T 14-10-2018 IPR003718 OsmC/Ohr family BJD94_15810 9540b757fd65128999e810dd5ad27557 140 Gene3D G3DSA:3.30.300.20 44 140 6.2E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_15810 9540b757fd65128999e810dd5ad27557 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 7.0E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BJD94_15810 9540b757fd65128999e810dd5ad27557 140 SUPERFAMILY SSF82784 1 135 5.63E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily BJD94_00335 507dc9e2c35ffb938b72dcfbd7d70b9b 284 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 59.47 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 BJD94_00335 507dc9e2c35ffb938b72dcfbd7d70b9b 284 Gene3D G3DSA:3.60.10.10 61 283 7.8E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_00335 507dc9e2c35ffb938b72dcfbd7d70b9b 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 4.5E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_00335 507dc9e2c35ffb938b72dcfbd7d70b9b 284 SUPERFAMILY SSF56219 60 279 8.11E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 Gene3D G3DSA:3.20.20.20 2 276 5.9E-113 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 SUPERFAMILY SSF51717 4 274 1.83E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 Pfam PF00809 Pterin binding enzyme 18 257 1.1E-91 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD94_14290 6ca7187d9c738c45198ce1f748b2c8a1 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 6.7E-104 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BJD94_05020 61b066fa984e2b2a530daba92123a3b3 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 1.4E-85 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 BJD94_03480 33f77c606a151772683266302439119d 173 SUPERFAMILY SSF55729 13 132 8.95E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03480 33f77c606a151772683266302439119d 173 Gene3D G3DSA:3.40.630.30 1 156 1.2E-22 T 14-10-2018 BJD94_03480 33f77c606a151772683266302439119d 173 Pfam PF13527 Acetyltransferase (GNAT) domain 14 125 7.2E-9 T 14-10-2018 BJD94_02710 33f77c606a151772683266302439119d 173 SUPERFAMILY SSF55729 13 132 8.95E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02710 33f77c606a151772683266302439119d 173 Gene3D G3DSA:3.40.630.30 1 156 1.2E-22 T 14-10-2018 BJD94_02710 33f77c606a151772683266302439119d 173 Pfam PF13527 Acetyltransferase (GNAT) domain 14 125 7.2E-9 T 14-10-2018 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 348 54.181 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 2 353 2.1E-182 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 1 352 1.5E-173 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 Gene3D G3DSA:3.20.20.105 1 352 7.5E-169 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 SUPERFAMILY SSF51713 1 348 3.27E-158 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_08280 3241f91f21613cfa8ca2a740809a4e0a 360 Pfam PF01702 Queuine tRNA-ribosyltransferase 110 345 1.5E-96 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD94_10190 ab92d168dac81716537587b938c42365 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 303 8.1E-16 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BJD94_10190 ab92d168dac81716537587b938c42365 344 Gene3D G3DSA:3.40.50.2000 163 332 2.1E-19 T 14-10-2018 BJD94_10190 ab92d168dac81716537587b938c42365 344 SUPERFAMILY SSF53756 2 312 1.05E-65 T 14-10-2018 BJD94_10190 ab92d168dac81716537587b938c42365 344 Gene3D G3DSA:3.40.50.2000 1 149 3.8E-29 T 14-10-2018 BJD94_01650 570891ec3ee5242002cc8ba173ece6e3 457 Pfam PF01420 Type I restriction modification DNA specificity domain 3 188 1.8E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BJD94_01650 570891ec3ee5242002cc8ba173ece6e3 457 SUPERFAMILY SSF116734 3 202 2.94E-43 T 14-10-2018 BJD94_01650 570891ec3ee5242002cc8ba173ece6e3 457 Gene3D G3DSA:3.90.220.20 1 199 1.4E-40 T 14-10-2018 BJD94_01650 570891ec3ee5242002cc8ba173ece6e3 457 Gene3D G3DSA:3.90.220.20 253 454 3.2E-21 T 14-10-2018 BJD94_01650 570891ec3ee5242002cc8ba173ece6e3 457 SUPERFAMILY SSF116734 256 454 3.92E-23 T 14-10-2018 BJD94_17260 85820dd4d2a805b9969d48e82f6a9719 278 SUPERFAMILY SSF53474 4 261 1.44E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_17260 85820dd4d2a805b9969d48e82f6a9719 278 Pfam PF12697 Alpha/beta hydrolase family 42 258 2.4E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_17260 85820dd4d2a805b9969d48e82f6a9719 278 Gene3D G3DSA:3.40.50.1820 3 265 5.8E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 Pfam PF10411 Disulfide bond isomerase protein N-terminus 48 98 8.9E-13 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 ProSitePatterns PS00194 Thioredoxin family active site. 137 155 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 SUPERFAMILY SSF54423 44 100 1.83E-13 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 Pfam PF13098 Thioredoxin-like domain 130 258 2.8E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 Gene3D G3DSA:3.40.30.10 98 261 6.5E-45 T 14-10-2018 BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 Gene3D G3DSA:3.10.450.70 37 97 3.4E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD94_08655 99bf1da9e33a19a409413441d34ecfe2 261 SUPERFAMILY SSF52833 120 260 6.87E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_12490 38799331ca771160dff251da3b5f1876 339 Gene3D G3DSA:3.40.630.30 1 274 3.6E-113 T 14-10-2018 BJD94_12490 38799331ca771160dff251da3b5f1876 339 SUPERFAMILY SSF55729 1 338 5.41E-130 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_12490 38799331ca771160dff251da3b5f1876 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.7E-132 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BJD94_12490 38799331ca771160dff251da3b5f1876 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 338 3.6E-140 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BJD94_12490 38799331ca771160dff251da3b5f1876 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.5E-130 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 BJD94_12490 38799331ca771160dff251da3b5f1876 339 Gene3D G3DSA:2.40.40.20 275 339 5.0E-7 T 14-10-2018 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 SUPERFAMILY SSF63411 738 942 4.78E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Gene3D G3DSA:3.30.830.10 743 937 3.4E-35 T 14-10-2018 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 SUPERFAMILY SSF63411 281 472 9.67E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Gene3D G3DSA:3.30.830.10 275 473 9.1E-32 T 14-10-2018 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 SUPERFAMILY SSF63411 50 259 2.0E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Gene3D G3DSA:3.30.830.10 48 272 3.5E-67 T 14-10-2018 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Pfam PF05193 Peptidase M16 inactive domain 687 858 1.0E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Pfam PF05193 Peptidase M16 inactive domain 220 394 1.8E-30 T 14-10-2018 IPR007863 Peptidase M16, C-terminal BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Gene3D G3DSA:3.30.830.10 525 730 8.8E-48 T 14-10-2018 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 SUPERFAMILY SSF63411 519 721 2.17E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Pfam PF00675 Insulinase (Peptidase family M16) 541 654 1.7E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BJD94_13900 5cdf0c768e6fe23298817aa0021b61b7 952 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 1.7E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal BJD94_16575 8b45fcbb632665bead1e4f16ec58049a 725 Gene3D G3DSA:3.20.20.450 459 716 2.7E-70 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_16575 8b45fcbb632665bead1e4f16ec58049a 725 Pfam PF00563 EAL domain 475 709 5.7E-57 T 14-10-2018 IPR001633 EAL domain BJD94_16575 8b45fcbb632665bead1e4f16ec58049a 725 SUPERFAMILY SSF141868 474 717 2.09E-65 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_16575 8b45fcbb632665bead1e4f16ec58049a 725 SMART SM00052 466 714 2.2E-58 T 14-10-2018 IPR001633 EAL domain BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 SUPERFAMILY SSF46894 119 217 3.12E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 SUPERFAMILY SSF52172 1 118 6.69E-36 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 SMART SM00448 1 112 1.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 SMART SM00862 145 216 3.3E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 Pfam PF00072 Response regulator receiver domain 3 113 7.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 Gene3D G3DSA:1.10.10.10 123 219 8.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_05045 d05c9e17513b7fb2bfe4c911c3288522 219 Gene3D G3DSA:3.40.50.2300 1 122 9.5E-37 T 14-10-2018 BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.0E-107 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 Gene3D G3DSA:3.40.50.150 102 294 4.8E-55 T 14-10-2018 BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 SUPERFAMILY SSF53335 44 274 4.87E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 PIRSF PIRSF000401 1 295 8.8E-99 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.165 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD94_12050 43777b3dd62d1badd4fcb69934f33390 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 4.0E-104 T 14-10-2018 BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 SUPERFAMILY SSF48208 78 566 4.08E-94 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 Pfam PF00759 Glycosyl hydrolase family 9 98 500 2.5E-23 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 Gene3D G3DSA:2.60.40.10 1 93 1.9E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 SUPERFAMILY SSF81296 2 90 8.4E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 Gene3D G3DSA:1.50.10.10 94 572 2.8E-224 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD94_14170 ea9a1c8f5ad7e1c25c234fff588dfbff 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 7.4E-9 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 BJD94_06085 33df0e61be32082ce7a0b015f5413b1d 81 Pfam PF02597 ThiS family 4 81 9.3E-24 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BJD94_06085 33df0e61be32082ce7a0b015f5413b1d 81 SUPERFAMILY SSF54285 1 81 2.06E-23 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD94_06085 33df0e61be32082ce7a0b015f5413b1d 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.1E-23 T 14-10-2018 BJD94_06085 33df0e61be32082ce7a0b015f5413b1d 81 Gene3D G3DSA:3.10.20.30 1 81 7.3E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 Gene3D G3DSA:3.90.1150.10 278 379 2.7E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 SUPERFAMILY SSF53383 19 378 4.59E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 PIRSF PIRSF000390 15 379 2.6E-86 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 1.9E-81 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 4.4E-164 T 14-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family BJD94_10110 42556889b91b1abadf4cbe8544dde2dd 381 Gene3D G3DSA:3.40.640.10 4 275 4.6E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.7E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 96 30.041 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 2.9E-50 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 Gene3D G3DSA:4.10.520.10 1 96 4.5E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 SMART SM00411 3 92 1.7E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD94_02530 9c7b5749d88a4b540471f350b7744ace 96 SUPERFAMILY SSF47729 3 94 8.83E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD94_04200 6adca74207e1eb49ae3e140f910e5e2d 106 Pfam PF01740 STAS domain 10 99 2.1E-10 T 14-10-2018 IPR002645 STAS domain BJD94_04200 6adca74207e1eb49ae3e140f910e5e2d 106 SUPERFAMILY SSF52091 7 101 1.77E-20 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_04200 6adca74207e1eb49ae3e140f910e5e2d 106 Gene3D G3DSA:3.30.750.24 2 105 6.6E-20 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_17190 cf870c0d19f0f5637ffa612796b9e8c0 350 Pfam PF01757 Acyltransferase family 5 327 3.3E-18 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD94_11045 ce25bfadeeae7d928e7e314cfce523c4 401 Gene3D G3DSA:1.20.1720.10 8 377 8.3E-72 T 14-10-2018 BJD94_11045 ce25bfadeeae7d928e7e314cfce523c4 401 SUPERFAMILY SSF103473 6 373 1.57E-50 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_11045 ce25bfadeeae7d928e7e314cfce523c4 401 Pfam PF07690 Major Facilitator Superfamily 13 349 6.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_11045 ce25bfadeeae7d928e7e314cfce523c4 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 4.4E-81 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD94_18535 1e6f7984fc430e4a379aeb9fc8d6ded8 330 Gene3D G3DSA:1.10.3720.10 92 308 3.8E-15 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18535 1e6f7984fc430e4a379aeb9fc8d6ded8 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 308 1.1E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_18535 1e6f7984fc430e4a379aeb9fc8d6ded8 330 SUPERFAMILY SSF161098 99 287 3.92E-19 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_16970 c0e47ec4a195bd4303fab447f33e0ed5 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 227 2.9E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_16970 c0e47ec4a195bd4303fab447f33e0ed5 286 Gene3D G3DSA:2.40.50.100 40 107 6.4E-13 T 14-10-2018 BJD94_16970 c0e47ec4a195bd4303fab447f33e0ed5 286 Gene3D G3DSA:2.40.30.170 168 286 1.2E-28 T 14-10-2018 BJD94_16970 c0e47ec4a195bd4303fab447f33e0ed5 286 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 228 2.4E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_16970 c0e47ec4a195bd4303fab447f33e0ed5 286 SUPERFAMILY SSF111369 38 237 1.57E-26 T 14-10-2018 BJD94_06565 95dd94f65fcdaa24303c2a3063d467ad 404 Pfam PF00155 Aminotransferase class I and II 61 391 2.9E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_06565 95dd94f65fcdaa24303c2a3063d467ad 404 Gene3D G3DSA:3.40.640.10 53 294 1.1E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_06565 95dd94f65fcdaa24303c2a3063d467ad 404 SUPERFAMILY SSF53383 5 400 7.53E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_06565 95dd94f65fcdaa24303c2a3063d467ad 404 Gene3D G3DSA:3.90.1150.10 21 398 1.1E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 Pfam PF01050 Mannose-6-phosphate isomerase 317 465 4.0E-64 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 467 1.0E-222 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 Gene3D G3DSA:3.90.550.10 5 352 4.6E-120 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 Gene3D G3DSA:2.60.120.10 356 470 4.4E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 Pfam PF00483 Nucleotidyl transferase 7 288 3.6E-70 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 SUPERFAMILY SSF51182 187 465 3.63E-83 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_09950 99994e6a507168bf03c5fb1e6d404bc9 472 SUPERFAMILY SSF53448 6 283 7.21E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 Hamap MF_00268 Protein RecA [recA]. 5 329 50.214 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 SUPERFAMILY SSF54752 269 324 6.28E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 SUPERFAMILY SSF52540 4 266 3.81E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 Gene3D G3DSA:3.40.50.300 26 267 2.0E-83 T 14-10-2018 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 SMART SM00382 57 228 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 9.3E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 Gene3D G3DSA:3.30.250.10 268 344 3.6E-24 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 4.1E-169 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 127 156 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 243 272 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 210 238 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 297 314 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 93 122 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_13810 a87d6a24a60fb7d9b0b46ae76ff2158a 349 PRINTS PR00142 RecA protein signature 165 194 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PIRSF PIRSF000149 1 331 3.4E-133 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF51735 3 166 1.63E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-136 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.40.50.720 4 326 2.0E-154 T 14-10-2018 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SMART SM00846 3 150 8.6E-95 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.5E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF55347 149 312 1.81E-77 T 14-10-2018 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 9.2E-70 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_06355 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.30.360.10 149 314 2.0E-154 T 14-10-2018 BJD94_01030 8f3920534d3bc89095e1a5ed69f9d90b 445 PIRSF PIRSF006060 1 434 1.7E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_01030 8f3920534d3bc89095e1a5ed69f9d90b 445 Gene3D G3DSA:1.20.1740.10 1 438 1.3E-59 T 14-10-2018 BJD94_01030 8f3920534d3bc89095e1a5ed69f9d90b 445 Pfam PF13520 Amino acid permease 8 421 1.5E-36 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 SUPERFAMILY SSF51419 41 279 7.98E-60 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 277 5.3E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 6.4E-15 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 8.6E-21 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 237 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 SUPERFAMILY SSF50621 260 387 1.47E-32 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 Gene3D G3DSA:2.40.37.10 30 381 1.6E-124 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_17545 88e05fad0e5fea225377afb08a800d45 399 Gene3D G3DSA:3.20.20.10 42 279 1.6E-124 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_11005 a552f086721b5491862e29df57b874d3 324 PIRSF PIRSF028696 1 324 2.9E-126 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 BJD94_11005 a552f086721b5491862e29df57b874d3 324 Pfam PF11059 Protein of unknown function (DUF2860) 32 323 3.9E-113 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 BJD94_11005 a552f086721b5491862e29df57b874d3 324 SUPERFAMILY SSF56935 42 324 2.69E-5 T 14-10-2018 BJD94_09645 8b8869811b80627439946764ba722e5a 209 SUPERFAMILY SSF55068 3 207 6.02E-79 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_09645 8b8869811b80627439946764ba722e5a 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 2.0E-65 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_09645 8b8869811b80627439946764ba722e5a 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.284 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_09645 8b8869811b80627439946764ba722e5a 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 5.2E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_09645 8b8869811b80627439946764ba722e5a 209 Gene3D G3DSA:3.30.1060.10 3 209 3.7E-89 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD94_00430 0691d48bf065c37a2ccc8d4a8a5e0fca 417 Pfam PF00860 Permease family 3 371 4.1E-91 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BJD94_00430 0691d48bf065c37a2ccc8d4a8a5e0fca 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BJD94_00430 0691d48bf065c37a2ccc8d4a8a5e0fca 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 4.1E-111 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BJD94_04385 ca8a9f69ac3dd43a1b58c4484f1f34b8 211 Pfam PF01810 LysE type translocator 15 208 6.5E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_04385 ca8a9f69ac3dd43a1b58c4484f1f34b8 211 PIRSF PIRSF006324 1 210 1.1E-56 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_08040 0c0568c83336f725727a93f3bdb23c3e 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.1E-30 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 BJD94_08040 0c0568c83336f725727a93f3bdb23c3e 143 SUPERFAMILY SSF55961 1 142 1.37E-32 T 14-10-2018 BJD94_08040 0c0568c83336f725727a93f3bdb23c3e 143 Gene3D G3DSA:3.30.530.20 1 143 1.6E-37 T 14-10-2018 IPR023393 START-like domain superfamily BJD94_21435 bef277a7d74b501d87d5a25587a61f9f 279 Gene3D G3DSA:2.60.120.330 1 279 1.3E-96 T 14-10-2018 IPR027443 Isopenicillin N synthase-like BJD94_21435 bef277a7d74b501d87d5a25587a61f9f 279 SUPERFAMILY SSF51197 7 276 6.04E-62 T 14-10-2018 BJD94_21435 bef277a7d74b501d87d5a25587a61f9f 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 6.5E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain BJD94_21435 bef277a7d74b501d87d5a25587a61f9f 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.1E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD94_16580 47d7ac44e341a38632249d5a5020de67 362 Gene3D G3DSA:2.60.120.260 15 134 2.9E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_16580 47d7ac44e341a38632249d5a5020de67 362 Gene3D G3DSA:3.40.50.1110 139 357 1.9E-49 T 14-10-2018 IPR036514 SGNH hydrolase superfamily BJD94_16580 47d7ac44e341a38632249d5a5020de67 362 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 146 323 7.2E-11 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD94_16580 47d7ac44e341a38632249d5a5020de67 362 SUPERFAMILY SSF52266 140 354 1.37E-15 T 14-10-2018 BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 Pfam PF00483 Nucleotidyl transferase 125 347 4.6E-37 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 Gene3D G3DSA:3.90.550.10 122 349 3.4E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 Pfam PF00571 CBS domain 9 54 3.6E-8 T 14-10-2018 IPR000644 CBS domain BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 SMART SM00116 6 54 0.002 T 14-10-2018 IPR000644 CBS domain BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 SMART SM00116 70 118 1.7 T 14-10-2018 IPR000644 CBS domain BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 SUPERFAMILY SSF54631 6 56 4.24E-9 T 14-10-2018 BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 Gene3D G3DSA:3.10.580.10 1 115 2.6E-21 T 14-10-2018 BJD94_10090 c5319fa3d62390b86ab6969be77f94c2 353 SUPERFAMILY SSF53448 48 347 7.27E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_16905 7abee8f17750a04dcad1580b4701a49f 129 Gene3D G3DSA:3.30.310.70 1 127 1.1E-46 T 14-10-2018 IPR035923 TT1751-like domain superfamily BJD94_16905 7abee8f17750a04dcad1580b4701a49f 129 PIRSF PIRSF021774 1 129 8.1E-46 T 14-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 BJD94_16905 7abee8f17750a04dcad1580b4701a49f 129 Pfam PF03625 Domain of unknown function DUF302 34 97 3.7E-27 T 14-10-2018 IPR005180 Domain of unknown function DUF302 BJD94_16905 7abee8f17750a04dcad1580b4701a49f 129 SUPERFAMILY SSF103247 1 126 4.71E-36 T 14-10-2018 IPR035923 TT1751-like domain superfamily BJD94_01210 9c193004d58a92c8c2400d3bdb314394 326 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 323 1.2E-85 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 BJD94_01210 9c193004d58a92c8c2400d3bdb314394 326 Gene3D G3DSA:2.40.128.140 21 324 4.3E-55 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 SMART SM00487 20 229 7.6E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 SUPERFAMILY SSF52540 75 356 1.1E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 SMART SM00490 258 339 9.2E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.5E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 Gene3D G3DSA:3.40.50.300 1 220 1.3E-74 T 14-10-2018 BJD94_21875 10e2eebaff9f1b3cc7c4085fbded4aca 427 Gene3D G3DSA:3.40.50.300 221 425 2.9E-48 T 14-10-2018 BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 SMART SM00487 20 229 7.6E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 SUPERFAMILY SSF52540 75 356 1.1E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 SMART SM00490 258 339 9.2E-31 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.5E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 Gene3D G3DSA:3.40.50.300 1 220 1.3E-74 T 14-10-2018 BJD94_14910 10e2eebaff9f1b3cc7c4085fbded4aca 427 Gene3D G3DSA:3.40.50.300 221 425 2.9E-48 T 14-10-2018 BJD94_02725 9282d20ad30ae8241e7631086e3c5ff1 145 Gene3D G3DSA:3.40.630.30 1 139 2.8E-20 T 14-10-2018 BJD94_02725 9282d20ad30ae8241e7631086e3c5ff1 145 SUPERFAMILY SSF55729 2 133 2.09E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02725 9282d20ad30ae8241e7631086e3c5ff1 145 Pfam PF00583 Acetyltransferase (GNAT) family 36 129 1.9E-10 T 14-10-2018 IPR000182 GNAT domain BJD94_12000 70a01163ec5b671e696f4b55ee2d6751 196 Gene3D G3DSA:1.20.1590.10 3 195 3.8E-64 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily BJD94_12000 70a01163ec5b671e696f4b55ee2d6751 196 Pfam PF04222 Protein of unknown function (DUF416) 6 193 3.5E-74 T 14-10-2018 IPR007338 Protein of unknown function DUF416 BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 SUPERFAMILY SSF52172 1 112 1.42E-27 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 SMART SM00448 1 113 2.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 Gene3D G3DSA:3.40.1550.10 139 320 1.8E-23 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 Pfam PF00072 Response regulator receiver domain 3 109 5.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 Gene3D G3DSA:3.40.50.2300 1 115 3.7E-27 T 14-10-2018 BJD94_03765 fc0bf737ff152d9dcc64a8931b1aef46 321 SUPERFAMILY SSF103039 140 319 2.35E-29 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_03970 598c5b65d6110d95e58b3f5e16aba20f 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 120 256 6.5E-17 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD94_03970 598c5b65d6110d95e58b3f5e16aba20f 262 Gene3D G3DSA:1.10.530.10 115 258 1.1E-13 T 14-10-2018 BJD94_15930 ccfa441eb4508050a3bd5b9e0d80186b 339 SUPERFAMILY SSF56281 75 303 2.59E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_15930 ccfa441eb4508050a3bd5b9e0d80186b 339 Pfam PF12706 Beta-lactamase superfamily domain 91 284 3.4E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_15930 ccfa441eb4508050a3bd5b9e0d80186b 339 Gene3D G3DSA:3.60.15.10 49 331 3.8E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_15930 ccfa441eb4508050a3bd5b9e0d80186b 339 PIRSF PIRSF038896 10 327 2.3E-92 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 BJD94_18480 55c1cdf0db847bb5034330210980de86 426 SUPERFAMILY SSF56935 68 426 2.69E-91 T 14-10-2018 BJD94_18480 55c1cdf0db847bb5034330210980de86 426 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 97 403 4.0E-40 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_18480 55c1cdf0db847bb5034330210980de86 426 Pfam PF02264 LamB porin 69 426 1.6E-73 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 BJD94_18480 55c1cdf0db847bb5034330210980de86 426 Gene3D G3DSA:2.40.170.10 67 426 1.1E-70 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 BJD94_07740 8187f590cc2a68e790ccf6ca6ee73309 181 Gene3D G3DSA:3.40.1580.20 1 181 1.4E-68 T 14-10-2018 IPR038228 Syd superfamily BJD94_07740 8187f590cc2a68e790ccf6ca6ee73309 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.53 T 14-10-2018 IPR009948 Syd GO:0009898 BJD94_07740 8187f590cc2a68e790ccf6ca6ee73309 181 Pfam PF07348 Syd protein (SUKH-2) 8 179 3.6E-69 T 14-10-2018 IPR009948 Syd GO:0009898 BJD94_17915 82ff87e874dd47158928c7d990e37218 214 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 26 185 29.087 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BJD94_17915 82ff87e874dd47158928c7d990e37218 214 Pfam PF03975 CheD chemotactic sensory transduction 84 181 5.6E-30 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BJD94_17915 82ff87e874dd47158928c7d990e37218 214 SUPERFAMILY SSF64438 30 186 2.29E-48 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BJD94_17915 82ff87e874dd47158928c7d990e37218 214 Gene3D G3DSA:3.30.1330.200 29 191 3.7E-48 T 14-10-2018 IPR038592 CheD-like superfamily BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 Gene3D G3DSA:3.20.20.70 2 316 2.5E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 SUPERFAMILY SSF51569 1 315 1.0E-113 T 14-10-2018 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 4.4E-154 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 4.2E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD94_15695 f0809dd05e313ead3878e3de111e2efa 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.047 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.5E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 53.042 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:3.30.300.30 519 650 4.3E-32 T 14-10-2018 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 8.7E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Pfam PF00501 AMP-binding enzyme 84 523 1.2E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 Gene3D G3DSA:3.40.50.12780 50 516 1.1E-105 T 14-10-2018 BJD94_12070 5224df04ba216ef92445db76a521f0f5 650 SUPERFAMILY SSF56801 10 644 8.11E-185 T 14-10-2018 BJD94_15720 d8c73c179e8804f1f2c70b7c8ae6112a 350 Gene3D G3DSA:3.20.20.70 1 349 2.7E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_15720 d8c73c179e8804f1f2c70b7c8ae6112a 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 6.1E-171 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_15720 d8c73c179e8804f1f2c70b7c8ae6112a 350 SUPERFAMILY SSF51569 6 347 1.26E-139 T 14-10-2018 BJD94_15720 d8c73c179e8804f1f2c70b7c8ae6112a 350 Pfam PF00793 DAHP synthetase I family 38 337 1.5E-108 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_15720 d8c73c179e8804f1f2c70b7c8ae6112a 350 PIRSF PIRSF001361 1 350 8.0E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_01255 3e861de833e64fb4acf0633454070f98 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 4.2E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_01255 3e861de833e64fb4acf0633454070f98 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BJD94_01255 3e861de833e64fb4acf0633454070f98 268 SUPERFAMILY SSF56219 1 268 1.06E-85 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_01255 3e861de833e64fb4acf0633454070f98 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 7.7E-99 T 14-10-2018 BJD94_01255 3e861de833e64fb4acf0633454070f98 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.3E-86 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BJD94_01255 3e861de833e64fb4acf0633454070f98 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 BJD94_01255 3e861de833e64fb4acf0633454070f98 268 Gene3D G3DSA:3.60.10.10 1 268 1.4E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_15090 8b5d6f52b701ac039863d95f8b8cb9e7 226 Pfam PF08906 Domain of unknown function (DUF1851) 134 206 4.8E-14 T 14-10-2018 IPR015002 Domain of unknown function DUF1851 BJD94_15090 8b5d6f52b701ac039863d95f8b8cb9e7 226 Pfam PF08887 GAD-like domain 9 110 4.4E-32 T 14-10-2018 IPR014983 GAD-related BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 Pfam PF01795 MraW methylase family 5 315 4.7E-111 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:1.10.150.170 112 218 2.3E-101 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF53335 7 316 2.15E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 315 1.4E-119 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:3.40.50.150 10 315 2.3E-101 T 14-10-2018 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF81799 113 216 7.98E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.968 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD94_08930 90d0bbb10b4f04564c4576d4c99cf46e 316 PIRSF PIRSF004486 1 316 5.9E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 2.2E-149 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 Gene3D G3DSA:3.30.2080.10 342 796 3.1E-206 T 14-10-2018 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 Gene3D G3DSA:1.20.1610.10 500 669 3.1E-206 T 14-10-2018 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 Gene3D G3DSA:2.70.98.10 44 396 3.1E-206 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 Gene3D G3DSA:1.20.1050.60 397 499 3.1E-206 T 14-10-2018 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 SUPERFAMILY SSF48208 307 776 7.31E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_18815 c79fc2f4681976718603d26f70eb11e3 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 2.1E-138 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 Gene3D G3DSA:1.10.287.950 218 547 1.2E-68 T 14-10-2018 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 SUPERFAMILY SSF58104 238 547 2.75E-68 T 14-10-2018 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 Pfam PF00672 HAMP domain 220 266 9.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 SMART SM00283 278 546 1.7E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 512 4.4E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19650 c9df47c4744468fa3fa62574bbaa978e 547 SMART SM00304 218 270 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19385 f7c5bfad532da422af44472eadddecc6 94 Pfam PF04221 RelB antitoxin 5 44 5.2E-5 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ BJD94_19385 f7c5bfad532da422af44472eadddecc6 94 Gene3D G3DSA:1.10.1220.10 1 45 6.1E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD94_09725 540c6c1ca37b6c54bb5144c29a608bf5 150 SUPERFAMILY SSF55729 1 149 3.72E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_09725 540c6c1ca37b6c54bb5144c29a608bf5 150 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 4.3E-16 T 14-10-2018 IPR000182 GNAT domain BJD94_09725 540c6c1ca37b6c54bb5144c29a608bf5 150 Gene3D G3DSA:3.40.630.30 1 149 3.5E-44 T 14-10-2018 BJD94_21580 4092544bb83da2b2eafe5ebafaaefd58 124 Pfam PF10719 Late competence development protein ComFB 8 85 4.8E-13 T 14-10-2018 IPR019657 Late competence development protein ComFB BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 Gene3D G3DSA:3.10.410.10 469 558 6.6E-32 T 14-10-2018 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 Gene3D G3DSA:3.40.50.300 4 454 5.8E-188 T 14-10-2018 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 Gene3D G3DSA:3.30.1510.10 129 264 5.8E-188 T 14-10-2018 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 2.2E-240 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 SUPERFAMILY SSF52540 4 580 1.91E-218 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.665 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD94_21260 18806ee99e4361f2b6dfdf79247145fa 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD94_14795 85050959479c87223f8ec6617907c8a1 403 Pfam PF00266 Aminotransferase class-V 24 392 5.5E-148 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_14795 85050959479c87223f8ec6617907c8a1 403 Gene3D G3DSA:3.90.1150.10 7 396 1.4E-162 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_14795 85050959479c87223f8ec6617907c8a1 403 Gene3D G3DSA:3.40.640.10 35 295 1.4E-162 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_14795 85050959479c87223f8ec6617907c8a1 403 SUPERFAMILY SSF53383 2 400 1.73E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_14795 85050959479c87223f8ec6617907c8a1 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 6.7E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD94_14795 85050959479c87223f8ec6617907c8a1 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 1.0E-155 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD94_14795 85050959479c87223f8ec6617907c8a1 403 PIRSF PIRSF005572 21 403 4.8E-50 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 SUPERFAMILY SSF55136 143 291 1.11E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 SMART SM00871 142 292 4.7E-21 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 SUPERFAMILY SSF46689 65 113 2.11E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 Pfam PF12833 Helix-turn-helix domain 34 112 2.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 Pfam PF06445 GyrI-like small molecule binding domain 143 291 1.3E-30 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 SUPERFAMILY SSF46689 11 62 8.96E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 Gene3D G3DSA:1.10.10.60 62 115 1.6E-16 T 14-10-2018 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 Gene3D G3DSA:3.20.80.10 143 292 4.3E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 Gene3D G3DSA:1.10.10.60 5 61 6.3E-15 T 14-10-2018 BJD94_20170 25e029c3ec60cef1cce5204c3886ef9e 294 SMART SM00342 28 112 1.5E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_14220 1393c5f3886e5171d6749bd162bd06a8 94 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 75 92 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BJD94_14220 1393c5f3886e5171d6749bd162bd06a8 94 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 89 2.0E-15 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BJD94_14220 1393c5f3886e5171d6749bd162bd06a8 94 SUPERFAMILY SSF89360 4 83 3.34E-26 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_14220 1393c5f3886e5171d6749bd162bd06a8 94 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 94 1.5E-33 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BJD94_14220 1393c5f3886e5171d6749bd162bd06a8 94 Gene3D G3DSA:2.60.300.12 1 94 1.1E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_19295 fedbca6fe6ddc10268bb4dd053e5fa83 133 SUPERFAMILY SSF47175 28 124 9.06E-28 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 BJD94_19295 fedbca6fe6ddc10268bb4dd053e5fa83 133 Gene3D G3DSA:1.20.120.10 27 124 2.3E-10 T 14-10-2018 BJD94_19295 fedbca6fe6ddc10268bb4dd053e5fa83 133 Pfam PF07361 Cytochrome b562 28 124 1.5E-27 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 BJD94_02295 d79033f5d57aa73bbd11bc04b54928ef 148 Gene3D G3DSA:1.10.3680.10 1 139 3.2E-19 T 14-10-2018 IPR029024 TerB-like BJD94_02295 d79033f5d57aa73bbd11bc04b54928ef 148 SUPERFAMILY SSF158682 2 147 2.35E-30 T 14-10-2018 IPR029024 TerB-like BJD94_02295 d79033f5d57aa73bbd11bc04b54928ef 148 Pfam PF05099 Tellurite resistance protein TerB 9 143 8.2E-40 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal BJD94_20355 6d23e31c0d459aea4bb64ac06fa9efa7 358 SUPERFAMILY SSF53383 28 346 2.14E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20355 6d23e31c0d459aea4bb64ac06fa9efa7 358 Gene3D G3DSA:3.40.640.10 2 253 2.0E-63 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20355 6d23e31c0d459aea4bb64ac06fa9efa7 358 Pfam PF01212 Beta-eliminating lyase 33 292 1.5E-32 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 BJD94_20355 6d23e31c0d459aea4bb64ac06fa9efa7 358 Gene3D G3DSA:3.90.1150.10 254 358 6.4E-10 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_15625 ebe5cd68dcbd1ed4ed27148ad0827378 302 Gene3D G3DSA:3.20.20.100 1 302 1.6E-98 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD94_15625 ebe5cd68dcbd1ed4ed27148ad0827378 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.9E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD94_15625 ebe5cd68dcbd1ed4ed27148ad0827378 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.9E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD94_15625 ebe5cd68dcbd1ed4ed27148ad0827378 302 SUPERFAMILY SSF51430 7 292 1.18E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD94_15625 ebe5cd68dcbd1ed4ed27148ad0827378 302 Pfam PF00248 Aldo/keto reductase family 16 291 3.6E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD94_17010 8ecc03c8f444b4a1666ac9f36b53452a 173 PIRSF PIRSF011443 2 173 4.4E-69 T 14-10-2018 IPR026267 Inner membrane protein YgjV BJD94_17010 8ecc03c8f444b4a1666ac9f36b53452a 173 Pfam PF10688 Bacterial inner membrane protein 7 163 4.9E-56 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV BJD94_06635 f4a51280217fad087c6fb8dc470a1b3a 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.3E-85 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD94_06635 f4a51280217fad087c6fb8dc470a1b3a 453 PIRSF PIRSF006066 1 447 9.6E-138 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD94_06635 f4a51280217fad087c6fb8dc470a1b3a 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 437 2.7E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 Pfam PF00771 FHIPEP family 34 690 2.9E-268 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 1.4E-263 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 149 172 - T 14-10-2018 IPR025505 FHIPEP conserved site BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 Gene3D G3DSA:1.10.8.540 510 597 1.1E-23 T 14-10-2018 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 Gene3D G3DSA:3.40.30.60 366 509 1.3E-53 T 14-10-2018 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 Gene3D G3DSA:1.10.490.80 601 698 3.0E-14 T 14-10-2018 BJD94_00660 ee284fe8b6f03973635c1c8c1ebb8aa7 700 PIRSF PIRSF005419 11 700 4.3E-251 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 586 3.7E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 SMART SM00283 358 619 8.2E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 Gene3D G3DSA:1.10.287.950 289 620 5.4E-63 T 14-10-2018 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 SUPERFAMILY SSF58104 311 620 5.75E-68 T 14-10-2018 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 Pfam PF00672 HAMP domain 289 339 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_03860 c6b2ceb799742d88255346eb97233dea 620 SMART SM00304 289 343 2.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_09400 fe7d3c8d6befa953a3a328fcccc9b1da 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 1.5E-126 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BJD94_09400 fe7d3c8d6befa953a3a328fcccc9b1da 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 36.241 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 BJD94_09400 fe7d3c8d6befa953a3a328fcccc9b1da 328 Gene3D G3DSA:3.40.718.10 1 328 1.2E-121 T 14-10-2018 BJD94_09400 fe7d3c8d6befa953a3a328fcccc9b1da 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 2.0E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BJD94_09400 fe7d3c8d6befa953a3a328fcccc9b1da 328 SUPERFAMILY SSF53659 3 326 3.84E-112 T 14-10-2018 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.275.10 1 117 8.1E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.20.200.10 118 447 1.1E-158 T 14-10-2018 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.6E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 SUPERFAMILY SSF48557 4 448 1.12E-108 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.7E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF00206 Lyase 14 313 4.3E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.40.30 383 446 1.1E-158 T 14-10-2018 BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_05425 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 Gene3D G3DSA:3.90.76.10 72 195 2.3E-194 T 14-10-2018 BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 7.8E-95 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 SUPERFAMILY SSF53850 35 530 2.71E-150 T 14-10-2018 BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 Gene3D G3DSA:3.10.105.10 297 512 2.3E-194 T 14-10-2018 BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 Gene3D G3DSA:3.40.190.10 42 524 2.3E-194 T 14-10-2018 BJD94_06075 35ef0dce4ac82e23b7c1cab257b71d57 543 PIRSF PIRSF002741 1 543 3.1E-117 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 PIRSF PIRSF004555 3 109 7.3E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 SUPERFAMILY SSF82607 11 103 2.09E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.506 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.0E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD94_00915 dd0f153fb787553dbcb4e183f9cc8b87 109 Gene3D G3DSA:3.30.1310.10 1 109 2.3E-47 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BJD94_10175 380a44e4296533cfdc3f55459fc84d2f 130 Gene3D G3DSA:1.10.3830.10 9 128 4.1E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_10175 380a44e4296533cfdc3f55459fc84d2f 130 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_10175 380a44e4296533cfdc3f55459fc84d2f 130 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 8.8E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD94_17195 3ec517a43e5f57998986e25ba071e10e 298 SUPERFAMILY SSF103481 38 139 2.22E-13 T 14-10-2018 BJD94_17195 3ec517a43e5f57998986e25ba071e10e 298 SUPERFAMILY SSF103481 189 285 1.31E-15 T 14-10-2018 BJD94_17195 3ec517a43e5f57998986e25ba071e10e 298 Pfam PF00892 EamA-like transporter family 152 282 5.0E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_17195 3ec517a43e5f57998986e25ba071e10e 298 Pfam PF00892 EamA-like transporter family 9 137 1.5E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_17420 3edc0db04f36d583c3f09ae585a724a4 204 SUPERFAMILY SSF53098 4 177 6.79E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_17420 3edc0db04f36d583c3f09ae585a724a4 204 SMART SM00479 6 173 3.7E-41 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_17420 3edc0db04f36d583c3f09ae585a724a4 204 Gene3D G3DSA:3.30.420.10 2 176 6.8E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_17420 3edc0db04f36d583c3f09ae585a724a4 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 180 1.2E-27 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_17420 3edc0db04f36d583c3f09ae585a724a4 204 Pfam PF00929 Exonuclease 8 163 7.7E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 SUPERFAMILY SSF161070 3 476 2.75E-148 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 466 5.6E-77 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 8.2E-41 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05665 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 SMART SM00825 Beta-ketoacyl synthase 1 403 1.5E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 237 1.8E-59 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 Gene3D G3DSA:3.40.47.10 1 245 5.8E-87 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 SUPERFAMILY SSF53901 1 242 8.23E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 SUPERFAMILY SSF53901 205 402 4.99E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 145 161 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 Gene3D G3DSA:3.40.47.10 251 403 1.6E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 360 8.3E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 PIRSF PIRSF000447 1 403 4.4E-198 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BJD94_05705 309f4c4c7eb816ff8cb22d614df4d050 403 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 401 4.6E-189 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 176 2.9E-40 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 Gene3D G3DSA:3.40.50.1240 2 189 2.8E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 SUPERFAMILY SSF53254 2 183 2.49E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 SMART SM00855 3 157 1.2E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_17855 fef43cc5156f4c9e9e1bc1c3c4752244 204 PIRSF PIRSF000709 1 198 4.1E-12 T 14-10-2018 BJD94_14675 bb52ee63985425ef849d577089a5463d 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 3.9E-8 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BJD94_14675 bb52ee63985425ef849d577089a5463d 184 Gene3D G3DSA:3.10.490.10 1 118 1.0E-7 T 14-10-2018 BJD94_14675 bb52ee63985425ef849d577089a5463d 184 SUPERFAMILY SSF110857 1 123 3.01E-16 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 133 209 6.5E-22 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 SUPERFAMILY SSF74653 124 202 5.1E-24 T 14-10-2018 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 Gene3D G3DSA:3.30.1150.10 109 211 1.1E-26 T 14-10-2018 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 134 209 6.5E-19 T 14-10-2018 IPR006260 TonB/TolA, C-terminal BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 60 70 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 148 166 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 127 148 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_21765 4724ac17fbad99ba7351eddf03091914 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 167 184 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 Gene3D G3DSA:1.20.1280.70 357 418 4.4E-27 T 14-10-2018 BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 Pfam PF08411 Exonuclease C-terminal 210 469 2.8E-102 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 Pfam PF00929 Exonuclease 11 190 2.7E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 PIRSF PIRSF000977 1 473 1.0E-196 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 Gene3D G3DSA:2.30.30.450 212 350 2.2E-55 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 SUPERFAMILY SSF53098 7 471 6.49E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_04820 a219e66ac168cc79d0e8706ad30074de 473 Gene3D G3DSA:3.30.420.10 1 199 3.8E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_07995 3e764728ac0587503878fdd02be6b617 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 289 3.6E-20 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BJD94_07995 3e764728ac0587503878fdd02be6b617 299 SUPERFAMILY SSF53807 13 293 7.85E-51 T 14-10-2018 BJD94_07995 3e764728ac0587503878fdd02be6b617 299 Gene3D G3DSA:3.40.50.1980 21 181 2.0E-19 T 14-10-2018 BJD94_00680 74d7f0e26472f701a91e2d0424972d0e 122 Pfam PF00072 Response regulator receiver domain 3 115 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00680 74d7f0e26472f701a91e2d0424972d0e 122 SMART SM00448 1 115 6.5E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_00680 74d7f0e26472f701a91e2d0424972d0e 122 SUPERFAMILY SSF52172 1 120 3.56E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00680 74d7f0e26472f701a91e2d0424972d0e 122 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-39 T 14-10-2018 BJD94_09140 b969f75b03e39450b3709e51a21f9e0e 147 Pfam PF09424 Yqey-like protein 5 146 1.2E-57 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 BJD94_09140 b969f75b03e39450b3709e51a21f9e0e 147 Gene3D G3DSA:1.10.10.410 91 147 8.9E-20 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BJD94_09140 b969f75b03e39450b3709e51a21f9e0e 147 Gene3D G3DSA:1.10.1510.10 1 90 3.1E-28 T 14-10-2018 BJD94_09140 b969f75b03e39450b3709e51a21f9e0e 147 SUPERFAMILY SSF89095 1 146 5.02E-44 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 50 259 3.9E-68 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 Pfam PF00691 OmpA family 323 421 8.7E-14 T 14-10-2018 IPR006665 OmpA-like domain BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 Gene3D G3DSA:3.30.1330.60 280 432 1.9E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 SUPERFAMILY SSF103088 311 427 9.03E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 Gene3D G3DSA:1.25.40.590 48 205 3.6E-48 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 292 427 1.5E-50 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain BJD94_15180 0cfe958ca1d5c85b2ade3bb544f085c3 442 Pfam PF09850 Type VI secretion system protein DotU 52 253 1.5E-57 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 SMART SM01091 342 420 5.9E-24 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 Pfam PF03471 Transporter associated domain 344 417 3.6E-18 T 14-10-2018 IPR005170 Transporter-associated domain BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 SUPERFAMILY SSF54631 192 329 8.09E-25 T 14-10-2018 BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 Gene3D G3DSA:3.30.465.10 340 418 3.6E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 Pfam PF01595 Domain of unknown function DUF21 13 181 1.3E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 SUPERFAMILY SSF56176 339 421 1.42E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 Gene3D G3DSA:3.10.580.10 201 330 4.3E-42 T 14-10-2018 BJD94_13920 773c33442a1b52d9902525a5c4abcadf 425 Pfam PF00571 CBS domain 278 326 1.1E-5 T 14-10-2018 IPR000644 CBS domain BJD94_08740 17363fdcef7a4d56c89a7bf17975f43d 160 SUPERFAMILY SSF89562 1 155 3.14E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BJD94_08740 17363fdcef7a4d56c89a7bf17975f43d 160 Pfam PF03737 Aldolase/RraA 5 152 2.9E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BJD94_08740 17363fdcef7a4d56c89a7bf17975f43d 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-71 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BJD94_08740 17363fdcef7a4d56c89a7bf17975f43d 160 Gene3D G3DSA:3.50.30.40 1 160 1.9E-64 T 14-10-2018 BJD94_15170 a41b868da6b713dd0c114c79b008daac 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 1.8E-38 T 14-10-2018 IPR017748 T6S-associated protein TagF BJD94_15170 a41b868da6b713dd0c114c79b008daac 231 Gene3D G3DSA:3.40.1730.10 8 230 2.8E-58 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily BJD94_15170 a41b868da6b713dd0c114c79b008daac 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 6.7E-45 T 14-10-2018 IPR017748 T6S-associated protein TagF BJD94_15170 a41b868da6b713dd0c114c79b008daac 231 PIRSF PIRSF029287 1 229 8.3E-31 T 14-10-2018 IPR017748 T6S-associated protein TagF BJD94_02625 8fcc76ab179bb904645c0d87736fc443 247 Pfam PF07070 SpoOM protein 2 215 7.0E-62 T 14-10-2018 IPR009776 Sporulation stage 0, protein M BJD94_04775 1ebbe98045e81673cac0d60f79274d61 342 PIRSF PIRSF017020 4 336 1.0E-123 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BJD94_04775 1ebbe98045e81673cac0d60f79274d61 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 9.4E-74 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_04775 1ebbe98045e81673cac0d60f79274d61 342 SUPERFAMILY SSF53187 9 329 5.18E-75 T 14-10-2018 BJD94_04775 1ebbe98045e81673cac0d60f79274d61 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.533 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 BJD94_04775 1ebbe98045e81673cac0d60f79274d61 342 Gene3D G3DSA:3.40.630.10 1 342 5.5E-122 T 14-10-2018 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 Gene3D G3DSA:3.40.1050.10 1 221 1.9E-85 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 SMART SM00947 30 192 2.2E-63 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 Pfam PF00484 Carbonic anhydrase 38 188 1.4E-48 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 SUPERFAMILY SSF53056 2 212 2.49E-73 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD94_14030 98c3458647a3ab4bf260dcb6231b1548 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD94_05110 9610e027b218ed91dea2d79886a79178 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD94_05110 9610e027b218ed91dea2d79886a79178 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 4.4E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD94_05110 9610e027b218ed91dea2d79886a79178 207 Gene3D G3DSA:1.20.120.1760 3 198 1.1E-19 T 14-10-2018 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 SUPERFAMILY SSF50249 4 69 3.43E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 SMART SM00357 6 70 1.1E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 7 22 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 43 61 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 28 37 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 PIRSF PIRSF002599 1 70 8.2E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.3E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD94_04645 cbeb1481c0ae67e3930690f0f2c54657 70 Gene3D G3DSA:2.40.50.140 2 70 1.4E-30 T 14-10-2018 BJD94_07650 5e0c5681789783d54870abe1a132d099 92 SUPERFAMILY SSF117991 7 92 6.93E-31 T 14-10-2018 IPR027471 YbeD-like domain superfamily BJD94_07650 5e0c5681789783d54870abe1a132d099 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.438 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 BJD94_07650 5e0c5681789783d54870abe1a132d099 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 3.0E-29 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 BJD94_07650 5e0c5681789783d54870abe1a132d099 92 Gene3D G3DSA:3.30.70.260 6 92 4.7E-33 T 14-10-2018 BJD94_11595 1033718c4e79abd982998bfd625c7652 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 198 2.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_11595 1033718c4e79abd982998bfd625c7652 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 11 194 8.0E-11 T 14-10-2018 BJD94_11595 1033718c4e79abd982998bfd625c7652 238 SUPERFAMILY SSF56784 10 236 3.53E-33 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_11595 1033718c4e79abd982998bfd625c7652 238 Gene3D G3DSA:3.40.50.1000 12 231 1.9E-55 T 14-10-2018 IPR023214 HAD superfamily BJD94_11595 1033718c4e79abd982998bfd625c7652 238 Gene3D G3DSA:1.20.120.1600 24 110 1.9E-55 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF81271 3 61 4.9E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.2E-242 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 2.8E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 SMART SM00863 171 220 1.6E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 70 223 1.2E-62 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.40.50.800 533 642 4.1E-30 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF02824 TGS domain 4 61 1.3E-12 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.089 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.10.20.30 3 62 1.4E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55681 244 527 1.38E-100 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF52954 530 637 1.96E-32 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF03129 Anticodon binding domain 542 631 4.5E-22 T 14-10-2018 IPR004154 Anticodon-binding BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.54.20 131 188 1.2E-62 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.930.10 224 532 1.3E-130 T 14-10-2018 BJD94_02635 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55186 65 242 6.93E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 SUPERFAMILY SSF46785 8 141 5.4E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 Gene3D G3DSA:1.10.10.10 1 142 1.1E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 Pfam PF01047 MarR family 35 92 5.3E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_17575 38fe95bcfc71bbc97948f425807e1fb3 142 SMART SM00347 28 128 1.1E-27 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 SUPERFAMILY SSF51735 3 166 6.99E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 3.5E-83 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 Gene3D G3DSA:3.40.50.720 2 167 3.0E-52 T 14-10-2018 BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 5.5E-36 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 Gene3D G3DSA:1.10.1040.10 168 297 2.5E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 SUPERFAMILY SSF48179 168 291 1.33E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_14805 53bf907c24d74574e9c5969507e3cf14 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 2.1E-33 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 SUPERFAMILY SSF51735 3 166 6.99E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 3.5E-83 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 Gene3D G3DSA:3.40.50.720 2 167 3.0E-52 T 14-10-2018 BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 5.5E-36 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 Gene3D G3DSA:1.10.1040.10 168 297 2.5E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 SUPERFAMILY SSF48179 168 291 1.33E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_00025 53bf907c24d74574e9c5969507e3cf14 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 2.1E-33 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 Pfam PF02355 Protein export membrane protein 101 284 1.1E-54 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 Pfam PF07549 SecD/SecF GG Motif 29 54 4.7E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.1E-63 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 288 22.933 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 SUPERFAMILY SSF82866 116 284 6.15E-35 T 14-10-2018 BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 Gene3D G3DSA:1.20.1640.10 97 290 5.8E-10 T 14-10-2018 BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 7.5E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 7.5E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 7.5E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 7.5E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_16125 4cb8a414155eb090ee610ee536ac4c9b 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 274 1.1E-48 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.2E-65 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 2.9E-185 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.7E-67 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 SUPERFAMILY SSF54197 181 348 1.02E-55 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 Gene3D G3DSA:3.30.428.10 178 350 2.6E-73 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 Gene3D G3DSA:3.30.428.10 46 177 1.3E-55 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 SUPERFAMILY SSF54197 6 179 4.86E-73 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_14645 ee8c577c41e3a8afc1875ffd2342f506 350 PIRSF PIRSF000808 2 345 1.4E-125 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 4.0E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 SUPERFAMILY SSF51735 3 167 2.49E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 SUPERFAMILY SSF48179 168 298 6.01E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 PIRSF PIRSF000103 1 305 1.6E-78 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 Gene3D G3DSA:3.40.50.720 1 167 1.1E-56 T 14-10-2018 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 7.1E-55 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 296 4.6E-124 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 BJD94_15405 8e1f770e5e64c8cbf1b0b64538999fde 305 Gene3D G3DSA:1.10.1040.10 169 303 1.3E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 Gene3D G3DSA:1.10.287.470 103 162 8.7E-75 T 14-10-2018 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 3.8E-28 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.5E-76 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 Gene3D G3DSA:2.40.420.20 280 351 8.7E-75 T 14-10-2018 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 Gene3D G3DSA:2.40.30.170 58 279 8.7E-75 T 14-10-2018 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 SUPERFAMILY SSF111369 58 273 6.28E-43 T 14-10-2018 BJD94_11335 c317c82a76db9f38af72680c4f8fab07 368 Gene3D G3DSA:2.40.50.100 68 196 8.7E-75 T 14-10-2018 BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 Pfam PF04266 ASCH domain 7 93 1.2E-15 T 14-10-2018 IPR007374 ASCH domain BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 SMART SM01022 7 103 4.5E-26 T 14-10-2018 IPR007374 ASCH domain BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 PIRSF PIRSF029143 2 104 3.8E-50 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 SUPERFAMILY SSF88697 4 104 2.73E-35 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 32.637 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 BJD94_20485 fffaecc1657644104cf0ad38b6f742ad 104 Gene3D G3DSA:2.30.130.30 2 104 1.3E-47 T 14-10-2018 BJD94_10830 7f730ac2ddf7114f9adc20906f404a2b 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 7.8E-20 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis BJD94_10830 7f730ac2ddf7114f9adc20906f404a2b 69 Gene3D G3DSA:3.10.20.30 4 69 6.2E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_10830 7f730ac2ddf7114f9adc20906f404a2b 69 Pfam PF02597 ThiS family 7 69 1.6E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BJD94_10830 7f730ac2ddf7114f9adc20906f404a2b 69 SUPERFAMILY SSF54285 5 69 4.36E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD94_15595 d2c791b04b3fcbf02169fe94e2231cf1 590 SMART SM01358 25 276 4.6E-6 T 14-10-2018 IPR032255 Helical bimodular sensor domain BJD94_15595 d2c791b04b3fcbf02169fe94e2231cf1 590 SMART SM00283 325 586 1.6E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15595 d2c791b04b3fcbf02169fe94e2231cf1 590 SUPERFAMILY SSF58104 280 587 2.27E-68 T 14-10-2018 BJD94_15595 d2c791b04b3fcbf02169fe94e2231cf1 590 Gene3D G3DSA:1.10.287.950 255 588 2.4E-65 T 14-10-2018 BJD94_15595 d2c791b04b3fcbf02169fe94e2231cf1 590 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 553 3.7E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PIRSF PIRSF002560 1 157 7.4E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 23 43 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 3 22 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 86 106 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 107 127 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 44 64 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 128 149 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 PRINTS PR00601 Bacterioferritin signature 65 85 4.4E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 SUPERFAMILY SSF47240 1 153 1.83E-55 T 14-10-2018 IPR009078 Ferritin-like superfamily BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 Pfam PF00210 Ferritin-like domain 8 143 8.2E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 Gene3D G3DSA:1.20.1260.10 1 158 3.2E-72 T 14-10-2018 IPR012347 Ferritin-like BJD94_12620 c8f8dcc145c157289eec247330e270a8 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.3E-82 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD94_10150 28ef83111a99a39a51800e30e0c5c654 359 Gene3D G3DSA:3.40.640.10 2 359 6.5E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_10150 28ef83111a99a39a51800e30e0c5c654 359 PIRSF PIRSF000390 1 359 3.2E-86 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD94_10150 28ef83111a99a39a51800e30e0c5c654 359 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 353 1.3E-73 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD94_10150 28ef83111a99a39a51800e30e0c5c654 359 SUPERFAMILY SSF53383 16 358 4.19E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 30.141 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 Gene3D G3DSA:1.20.120.910 17 147 9.1E-36 T 14-10-2018 BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.0E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 SUPERFAMILY SSF109635 7 107 6.93E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 1.6E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BJD94_14075 7c36951c3d4353e8e0515893f35df870 148 SUPERFAMILY SSF57716 108 146 5.84E-10 T 14-10-2018 BJD94_03000 35e551eb51f2dfdabd975acb0252ad9a 152 Pfam PF00583 Acetyltransferase (GNAT) family 25 132 4.8E-12 T 14-10-2018 IPR000182 GNAT domain BJD94_03000 35e551eb51f2dfdabd975acb0252ad9a 152 Gene3D G3DSA:3.40.630.30 1 142 2.1E-23 T 14-10-2018 BJD94_03000 35e551eb51f2dfdabd975acb0252ad9a 152 SUPERFAMILY SSF55729 5 139 2.23E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Pfam PF01464 Transglycosylase SLT domain 128 226 1.0E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SUPERFAMILY SSF54106 343 387 1.96E-10 T 14-10-2018 BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Pfam PF06474 MltD lipid attachment motif 1 19 5.9E-8 T 14-10-2018 IPR010511 Lytic murein transglycosylase D , lipid attachment domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Gene3D G3DSA:1.10.530.10 111 262 9.2E-30 T 14-10-2018 BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SUPERFAMILY SSF54106 417 462 1.83E-10 T 14-10-2018 BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Pfam PF01476 LysM domain 345 387 7.0E-10 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Pfam PF01476 LysM domain 476 518 1.1E-11 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Pfam PF01476 LysM domain 419 461 6.2E-12 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Gene3D G3DSA:3.10.350.10 473 521 6.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SUPERFAMILY SSF54106 474 519 4.84E-10 T 14-10-2018 BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SUPERFAMILY SSF53955 113 270 3.94E-42 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SMART SM00257 344 387 3.3E-12 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SMART SM00257 418 462 3.1E-13 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 SMART SM00257 475 519 2.1E-10 T 14-10-2018 IPR018392 LysM domain BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Gene3D G3DSA:3.10.350.10 333 401 8.7E-14 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 Gene3D G3DSA:3.10.350.10 402 470 2.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_00345 42c08819725fce2b2a4ef11a9545b46d 527 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BJD94_05250 03bca1d8e1b08440d6af99525fd09d7d 579 SUPERFAMILY SSF51445 193 532 8.8E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_05250 03bca1d8e1b08440d6af99525fd09d7d 579 Gene3D G3DSA:3.20.20.70 188 495 9.2E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_05250 03bca1d8e1b08440d6af99525fd09d7d 579 Pfam PF02065 Melibiase 170 352 1.4E-16 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 BJD94_14035 0ecd08ff97cf47d0f0840afa82c15c4e 556 Pfam PF00916 Sulfate permease family 11 376 5.6E-84 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD94_14035 0ecd08ff97cf47d0f0840afa82c15c4e 556 SUPERFAMILY SSF52091 439 541 4.12E-13 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_14035 0ecd08ff97cf47d0f0840afa82c15c4e 556 Pfam PF01740 STAS domain 440 533 5.8E-15 T 14-10-2018 IPR002645 STAS domain BJD94_14035 0ecd08ff97cf47d0f0840afa82c15c4e 556 Gene3D G3DSA:3.30.750.24 428 550 7.0E-17 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_05660 4829bd761213142aa0a278a634097a4c 197 Gene3D G3DSA:2.40.160.20 24 197 2.8E-10 T 14-10-2018 BJD94_05660 4829bd761213142aa0a278a634097a4c 197 SUPERFAMILY SSF56925 20 197 6.54E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_05680 72dccb030de7d9932ad817d002622a80 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 SUPERFAMILY SSF51556 1 253 1.18E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_05680 72dccb030de7d9932ad817d002622a80 255 PIRSF PIRSF005902 1 255 1.2E-82 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 6.0E-93 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 Pfam PF01026 TatD related DNase 3 253 2.9E-78 T 14-10-2018 IPR001130 TatD family GO:0016788 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD94_05680 72dccb030de7d9932ad817d002622a80 255 Gene3D G3DSA:3.20.20.140 1 255 3.0E-100 T 14-10-2018 BJD94_00485 5cec3cc950c086b9312ca5f67170da3d 339 PIRSF PIRSF026343 4 339 2.7E-127 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC BJD94_00485 5cec3cc950c086b9312ca5f67170da3d 339 Pfam PF06804 NlpB/DapX lipoprotein 36 335 8.4E-107 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein BJD94_00485 5cec3cc950c086b9312ca5f67170da3d 339 Gene3D G3DSA:3.30.530.50 96 206 1.3E-11 T 14-10-2018 BJD94_00485 5cec3cc950c086b9312ca5f67170da3d 339 Gene3D G3DSA:3.30.310.170 220 339 1.4E-42 T 14-10-2018 BJD94_00485 5cec3cc950c086b9312ca5f67170da3d 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.99 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC BJD94_02305 b99db4ecedb8e2188fda87311f1a4f4b 434 Pfam PF06629 MltA-interacting protein MipA 43 236 6.5E-21 T 14-10-2018 IPR010583 MltA-interacting MipA BJD94_02315 f228b40dd583158a6c6effd414d590dc 962 Gene3D G3DSA:2.60.40.10 644 734 2.2E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02315 f228b40dd583158a6c6effd414d590dc 962 ProSitePatterns PS00018 EF-hand calcium-binding domain. 451 463 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD94_02315 f228b40dd583158a6c6effd414d590dc 962 SUPERFAMILY SSF49265 653 719 1.16E-5 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 SMART SM00493 81 166 8.9E-17 T 14-10-2018 IPR006171 TOPRIM domain BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 SUPERFAMILY SSF111304 2 199 4.84E-72 T 14-10-2018 IPR023627 Recombination protein RecR BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.501 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 Pfam PF02132 RecR protein 41 77 3.1E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 Pfam PF13662 Toprim domain 83 172 1.7E-22 T 14-10-2018 IPR006171 TOPRIM domain BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 Gene3D G3DSA:3.40.1360.10 78 199 3.0E-38 T 14-10-2018 BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.5E-77 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BJD94_00920 7435ff70a3884cd1f3c81b924fd13953 200 Gene3D G3DSA:1.10.8.420 1 53 5.8E-19 T 14-10-2018 BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 SUPERFAMILY SSF47616 72 201 2.37E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 Gene3D G3DSA:3.40.30.10 1 83 1.6E-32 T 14-10-2018 BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 SUPERFAMILY SSF52833 1 77 2.37E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 192 1.6E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 1.7E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD94_15495 03360ea61522aae8525cd89b2c3719ff 205 Gene3D G3DSA:1.20.1050.10 84 198 5.5E-34 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 565 1.6E-17 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 430 7.9E-160 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 SUPERFAMILY SSF143968 480 615 3.01E-31 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 SUPERFAMILY SSF143968 323 461 3.92E-51 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 Gene3D G3DSA:3.40.1670.10 479 583 4.0E-20 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 Gene3D G3DSA:3.40.1670.10 337 453 8.2E-44 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 1.4E-161 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 SUPERFAMILY SSF50475 3 322 8.24E-122 T 14-10-2018 BJD94_10715 53b109fb06971a5cb5bdee345303a832 617 Gene3D G3DSA:1.20.5.570 584 617 1.9E-14 T 14-10-2018 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 Pfam PF05746 DALR anticodon binding domain 580 677 1.5E-9 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 5.7E-204 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 SUPERFAMILY SSF109604 351 490 1.73E-12 T 14-10-2018 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.9E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.9E-296 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_11210 4d14f1308fdc983a00f065a0bbf73a60 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.796 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD94_12400 f0f4661fee8256388bbf2cd58172022a 86 SUPERFAMILY SSF50182 7 69 1.16E-24 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_12400 f0f4661fee8256388bbf2cd58172022a 86 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD94_12400 f0f4661fee8256388bbf2cd58172022a 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD94_12400 f0f4661fee8256388bbf2cd58172022a 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD94_12400 f0f4661fee8256388bbf2cd58172022a 86 Gene3D G3DSA:2.30.30.100 1 72 4.5E-35 T 14-10-2018 BJD94_06715 e2d071c3a90f615a659a359ccf76b085 250 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 248 3.0E-73 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD94_06715 e2d071c3a90f615a659a359ccf76b085 250 SUPERFAMILY SSF53901 40 160 1.33E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 BJD94_02205 077100651e86629d84104d4e00edb912 722 Gene3D G3DSA:3.40.50.300 445 704 1.1E-28 T 14-10-2018 BJD94_02205 077100651e86629d84104d4e00edb912 722 Pfam PF13807 G-rich domain on putative tyrosine kinase 378 451 2.1E-9 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain BJD94_02205 077100651e86629d84104d4e00edb912 722 SUPERFAMILY SSF52540 515 699 7.67E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02205 077100651e86629d84104d4e00edb912 722 Pfam PF02706 Chain length determinant protein 14 106 4.5E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BJD94_07805 4228328e3e857718a6b87238202fc1d9 236 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 196 1.0E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_07805 4228328e3e857718a6b87238202fc1d9 236 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 165 182 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BJD94_06360 0aee1f336cd3627a08b9efb8670fb0c7 294 Pfam PF01263 Aldose 1-epimerase 27 291 5.0E-52 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BJD94_06360 0aee1f336cd3627a08b9efb8670fb0c7 294 PIRSF PIRSF016020 5 294 5.3E-62 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 BJD94_06360 0aee1f336cd3627a08b9efb8670fb0c7 294 Gene3D G3DSA:2.70.98.10 2 293 3.0E-85 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD94_06360 0aee1f336cd3627a08b9efb8670fb0c7 294 SUPERFAMILY SSF74650 6 290 1.88E-75 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 Pfam PF13649 Methyltransferase domain 63 161 2.1E-13 T 14-10-2018 BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 4.4E-117 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 PIRSF PIRSF006325 4 245 1.6E-124 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 Gene3D G3DSA:3.40.50.150 21 245 4.3E-64 T 14-10-2018 BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 SUPERFAMILY SSF53335 23 245 1.55E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_01455 df6b0a6b0c55bf068f2063a98ac348d7 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.163 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BJD94_08460 0a5b83249f52e29c4971eccc9dd61cba 178 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 172 1.3E-44 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase BJD94_08460 0a5b83249f52e29c4971eccc9dd61cba 178 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 29.386 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase BJD94_08460 0a5b83249f52e29c4971eccc9dd61cba 178 Pfam PF01931 Protein of unknown function DUF84 9 167 5.3E-56 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 BJD94_08460 0a5b83249f52e29c4971eccc9dd61cba 178 SUPERFAMILY SSF52972 4 173 5.23E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_08460 0a5b83249f52e29c4971eccc9dd61cba 178 Gene3D G3DSA:3.90.950.10 1 176 9.0E-66 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_21070 a8d9159e751b9d260e80e33cf27872c4 372 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 2.2E-27 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 BJD94_21070 a8d9159e751b9d260e80e33cf27872c4 372 Pfam PF02661 Fic/DOC family 111 223 1.1E-14 T 14-10-2018 IPR003812 Fido domain BJD94_21070 a8d9159e751b9d260e80e33cf27872c4 372 SUPERFAMILY SSF140931 94 293 1.57E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily BJD94_21070 a8d9159e751b9d260e80e33cf27872c4 372 Gene3D G3DSA:1.10.3290.10 37 291 3.3E-44 T 14-10-2018 IPR036597 Fido-like domain superfamily BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 Gene3D G3DSA:3.40.50.1820 5 254 1.1E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.7E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.0E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_07035 87d207b579f7f1b744e8121bff9136d1 255 SUPERFAMILY SSF53474 5 253 9.44E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_05975 f93837545226f9e4560881e0eae3328b 206 SUPERFAMILY SSF55821 1 203 3.66E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BJD94_05975 f93837545226f9e4560881e0eae3328b 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 9.6E-71 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BJD94_05975 f93837545226f9e4560881e0eae3328b 206 Pfam PF01300 Telomere recombination 23 198 1.4E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 BJD94_05975 f93837545226f9e4560881e0eae3328b 206 Gene3D G3DSA:3.90.870.10 1 205 1.2E-67 T 14-10-2018 BJD94_13035 d8879c5bfe4ee3e5ca8ac9c264873dde 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 8.0E-124 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BJD94_13035 d8879c5bfe4ee3e5ca8ac9c264873dde 290 Gene3D G3DSA:3.90.550.10 1 279 8.9E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_13035 d8879c5bfe4ee3e5ca8ac9c264873dde 290 SUPERFAMILY SSF53448 2 271 1.11E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_13035 d8879c5bfe4ee3e5ca8ac9c264873dde 290 Pfam PF00483 Nucleotidyl transferase 9 265 3.8E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_01435 56115103b613d445aa6cd586bf5bc2a1 330 Pfam PF14397 Sugar-transfer associated ATP-grasp 25 298 7.6E-115 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD94_01435 56115103b613d445aa6cd586bf5bc2a1 330 SUPERFAMILY SSF56059 46 283 4.38E-20 T 14-10-2018 BJD94_01435 56115103b613d445aa6cd586bf5bc2a1 330 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 323 3.2E-170 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein BJD94_03345 f4277d866ac0f72a3d59dfbe3db69d0e 189 SUPERFAMILY SSF56399 85 188 4.89E-21 T 14-10-2018 BJD94_03345 f4277d866ac0f72a3d59dfbe3db69d0e 189 Pfam PF10386 Protein of unknown function (DUF2441) 88 166 1.1E-7 T 14-10-2018 IPR018840 Protein of unknown function DUF2441 BJD94_16555 620eda929937637bbd6e1d7cb7633e0c 229 SUPERFAMILY SSF161098 10 202 2.09E-40 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_16555 620eda929937637bbd6e1d7cb7633e0c 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 111 2.1E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_16555 620eda929937637bbd6e1d7cb7633e0c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 1.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_16555 620eda929937637bbd6e1d7cb7633e0c 229 Gene3D G3DSA:1.10.3720.10 2 219 2.4E-49 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_13195 11664c5354e9d5d9bf5a430c67eae093 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.9E-52 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BJD94_13195 11664c5354e9d5d9bf5a430c67eae093 129 Gene3D G3DSA:3.30.1330.40 2 129 5.8E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_13195 11664c5354e9d5d9bf5a430c67eae093 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BJD94_13195 11664c5354e9d5d9bf5a430c67eae093 129 SUPERFAMILY SSF55298 2 128 2.36E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_13195 11664c5354e9d5d9bf5a430c67eae093 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD94_00325 55def37676d2f560ee795300603b0d03 104 SUPERFAMILY SSF46626 16 103 1.32E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_00325 55def37676d2f560ee795300603b0d03 104 Pfam PF00034 Cytochrome c 30 104 2.1E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_00325 55def37676d2f560ee795300603b0d03 104 Gene3D G3DSA:1.10.760.10 23 104 8.3E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_06370 c329332fb46b2243ddf882c11adcde2a 562 TIGRFAM TIGR04456 LruC_dom: LruC domain 315 551 7.8E-68 T 14-10-2018 IPR031025 LruC domain BJD94_06370 c329332fb46b2243ddf882c11adcde2a 562 Pfam PF16130 Domain of unknown function (DUF4842) 348 550 2.2E-47 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 Gene3D G3DSA:3.30.60.20 141 186 1.2E-7 T 14-10-2018 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 170 183 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 SUPERFAMILY SSF52540 1 138 1.01E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 SUPERFAMILY SSF57716 139 187 7.6E-17 T 14-10-2018 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 Hamap MF_00124 Thymidine kinase [tdk]. 1 186 32.586 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 PIRSF PIRSF035805 1 189 2.9E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 Pfam PF00265 Thymidine kinase 2 183 1.3E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD94_05325 65576001c26f66de4ca908b41f4a4f6a 189 Gene3D G3DSA:3.40.50.300 1 137 1.1E-23 T 14-10-2018 BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 1.4E-57 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 PIRSF PIRSF029256 1 157 7.0E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.501 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 SUPERFAMILY SSF75217 2 155 1.31E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 Gene3D G3DSA:3.40.1280.10 1 157 2.6E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_12145 1b93835f72cc20f04746b8a96e234f26 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 6.6E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 3 107 4.0E-42 T 14-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 SUPERFAMILY SSF89360 1 96 5.76E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.2E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.9E-58 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.9E-27 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 Gene3D G3DSA:2.60.300.12 2 107 1.9E-39 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD94_08225 c089f6bc9682123be14fb20a648c64b1 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BJD94_06730 77d754cbac0f41ef2f89faf4fd803748 84 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.069 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD94_06730 77d754cbac0f41ef2f89faf4fd803748 84 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.9E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_06730 77d754cbac0f41ef2f89faf4fd803748 84 SUPERFAMILY SSF47336 4 82 1.7E-19 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_06730 77d754cbac0f41ef2f89faf4fd803748 84 Gene3D G3DSA:1.10.1200.10 1 80 6.6E-19 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 6.4E-51 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 Gene3D G3DSA:3.40.50.450 121 450 4.8E-125 T 14-10-2018 BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 Pfam PF03641 Possible lysine decarboxylase 187 325 3.5E-34 T 14-10-2018 IPR031100 LOG family BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 5.2E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 SUPERFAMILY SSF102405 119 327 7.48E-41 T 14-10-2018 BJD94_07760 b9ceb9239b35ba1e5cb6199c117bd960 458 Gene3D G3DSA:3.30.1850.10 1 120 1.6E-57 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD94_15075 0b052534b7d94e60653786817b9f701b 113 Gene3D G3DSA:3.30.500.20 1 102 6.8E-7 T 14-10-2018 BJD94_15075 0b052534b7d94e60653786817b9f701b 113 SUPERFAMILY SSF160424 1 101 8.11E-15 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily BJD94_17655 7bb80b21faa38008c5e51dc30426143a 590 SUPERFAMILY SSF63829 295 478 7.19E-10 T 14-10-2018 BJD94_16470 ca8f4dd9dd948c5fa4b3efa39f509741 251 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 70 8.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_16470 ca8f4dd9dd948c5fa4b3efa39f509741 251 SUPERFAMILY SSF47413 7 69 8.44E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_02030 f670dd6c4741061f739909d3e28b1d5a 458 Pfam PF04317 YcjX-like family, DUF463 20 457 2.4E-186 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein BJD94_02030 f670dd6c4741061f739909d3e28b1d5a 458 PIRSF PIRSF019381 1 458 2.1E-198 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein BJD94_02045 6eb7f441705dcbdff10119c7f2be85e6 191 Gene3D G3DSA:3.40.630.30 12 188 3.5E-47 T 14-10-2018 BJD94_02045 6eb7f441705dcbdff10119c7f2be85e6 191 Pfam PF13302 Acetyltransferase (GNAT) domain 15 158 4.0E-21 T 14-10-2018 IPR000182 GNAT domain BJD94_02045 6eb7f441705dcbdff10119c7f2be85e6 191 SUPERFAMILY SSF55729 11 183 4.58E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 Gene3D G3DSA:1.20.81.30 257 368 2.1E-24 T 14-10-2018 BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-33 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 6.7E-24 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 Gene3D G3DSA:1.20.81.30 57 172 6.8E-36 T 14-10-2018 BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 5.6E-154 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family BJD94_10470 dfc59fe58e48e7503989d0286af9b549 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Gene3D G3DSA:2.60.40.1180 481 561 2.6E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Gene3D G3DSA:3.90.400.10 112 175 4.9E-31 T 14-10-2018 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 3.6E-129 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 1.3E-6 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 SUPERFAMILY SSF51011 480 559 2.97E-17 T 14-10-2018 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Gene3D G3DSA:3.20.20.80 1 111 1.5E-49 T 14-10-2018 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 SUPERFAMILY SSF51445 9 477 1.09E-163 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 6.8E-270 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 SMART SM00642 18 419 6.4E-168 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_07700 5511f79a727d0c0c51b23ef1a1fb6bc7 561 Gene3D G3DSA:3.20.20.80 176 480 1.2E-114 T 14-10-2018 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 19 108 6.8E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 117 201 7.5E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 25 103 1.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 114 203 6.06E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 109 205 1.6E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 PIRSF PIRSF000005 1 205 4.8E-65 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 BJD94_10585 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 16 104 1.14E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_09935 ca46e2e1b2b74788be8116c48a73d12f 359 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.509 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 BJD94_09935 ca46e2e1b2b74788be8116c48a73d12f 359 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 1.1E-170 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 BJD94_09935 ca46e2e1b2b74788be8116c48a73d12f 359 Pfam PF00953 Glycosyl transferase family 4 69 227 7.8E-30 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 Pfam PF01228 Glycine radical 15 106 1.4E-22 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.06 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 7.8E-69 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 PIRSF PIRSF000378 2 125 5.9E-54 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 SUPERFAMILY SSF51998 65 124 1.1E-23 T 14-10-2018 BJD94_08715 cf5fa6a009932b9a53602d9529847a13 125 Gene3D G3DSA:3.20.70.20 49 125 1.6E-25 T 14-10-2018 BJD94_17995 767d0fe0b88b54bbc8b1821f600df26a 213 Pfam PF00925 GTP cyclohydrolase II 20 182 1.3E-66 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_17995 767d0fe0b88b54bbc8b1821f600df26a 213 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 13 208 44.281 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_17995 767d0fe0b88b54bbc8b1821f600df26a 213 Gene3D G3DSA:3.40.50.10990 14 185 1.0E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_17995 767d0fe0b88b54bbc8b1821f600df26a 213 SUPERFAMILY SSF142695 14 184 3.4E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_17995 767d0fe0b88b54bbc8b1821f600df26a 213 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 19 205 1.7E-81 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_10785 9de34575d9a4a9f4d85cfe68d88f5254 291 SUPERFAMILY SSF51658 30 255 2.82E-6 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily BJD94_10785 9de34575d9a4a9f4d85cfe68d88f5254 291 Pfam PF05114 Protein of unknown function (DUF692) 10 274 9.1E-107 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 BJD94_10785 9de34575d9a4a9f4d85cfe68d88f5254 291 Gene3D G3DSA:3.20.20.150 6 282 6.4E-88 T 14-10-2018 BJD94_10785 9de34575d9a4a9f4d85cfe68d88f5254 291 Hamap MF_00697 UPF0276 protein . 10 282 45.541 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 BJD94_12790 f0095ac62320b40e7416ecfd9878de1c 196 PIRSF PIRSF016482 1 196 1.6E-66 T 14-10-2018 IPR007445 Pilus assembly protein, PilO BJD94_12790 f0095ac62320b40e7416ecfd9878de1c 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 8.6E-46 T 14-10-2018 IPR007445 Pilus assembly protein, PilO BJD94_12790 f0095ac62320b40e7416ecfd9878de1c 196 Gene3D G3DSA:3.30.70.60 92 196 6.0E-26 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BJD94_16300 6019ac943f465d167f6ca96b26e2886c 152 Gene3D G3DSA:3.40.190.10 31 151 4.9E-6 T 14-10-2018 BJD94_16300 6019ac943f465d167f6ca96b26e2886c 152 SUPERFAMILY SSF53850 31 141 2.53E-6 T 14-10-2018 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 1.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 1.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 SUPERFAMILY SSF46689 59 107 9.68E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 SUPERFAMILY SSF55136 153 298 6.41E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 Gene3D G3DSA:3.20.80.10 151 300 1.6E-34 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 SMART SM00342 23 106 1.4E-33 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 Gene3D G3DSA:1.10.10.60 57 112 5.7E-15 T 14-10-2018 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 Pfam PF06445 GyrI-like small molecule binding domain 152 292 7.8E-27 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 Pfam PF12833 Helix-turn-helix domain 29 107 4.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 SMART SM00871 150 299 1.0E-19 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 Gene3D G3DSA:1.10.10.60 2 56 1.0E-16 T 14-10-2018 BJD94_16405 d7d5c8d6e7094a00e372c118a86cc3dd 300 SUPERFAMILY SSF46689 6 57 3.23E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 SUPERFAMILY SSF52540 3 436 8.29E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12425 d33c15a5ab32d13700518545595c1790 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 218.871 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:1.10.300.10 102 201 1.7E-107 T 14-10-2018 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 SMART SM00788 4 431 0.0 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.0E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:3.90.170.10 267 438 5.6E-67 T 14-10-2018 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.2E-192 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD94_12425 d33c15a5ab32d13700518545595c1790 438 Gene3D G3DSA:3.40.440.10 6 249 1.7E-107 T 14-10-2018 BJD94_16235 41389fd3d0f1500aebfa6104dde2de01 718 Pfam PF01968 Hydantoinase/oxoprolinase 200 506 5.1E-67 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 BJD94_16235 41389fd3d0f1500aebfa6104dde2de01 718 SUPERFAMILY SSF53067 15 500 2.36E-14 T 14-10-2018 BJD94_16235 41389fd3d0f1500aebfa6104dde2de01 718 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 15 181 2.4E-25 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 BJD94_16235 41389fd3d0f1500aebfa6104dde2de01 718 Gene3D G3DSA:3.30.420.40 11 88 4.0E-9 T 14-10-2018 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 Gene3D G3DSA:3.40.50.2020 4 299 8.8E-135 T 14-10-2018 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 49.586 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 5.2E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 SMART SM01400 1 118 7.0E-78 T 14-10-2018 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 SUPERFAMILY SSF53271 66 303 7.9E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 Gene3D G3DSA:3.40.50.2020 145 287 8.8E-135 T 14-10-2018 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.3E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD94_07480 8f2709cb5308a16559a9733fb0242a07 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 2.6E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Pfam PF03473 MOSC domain 139 262 1.6E-28 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Gene3D G3DSA:3.40.50.80 380 506 5.2E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 SUPERFAMILY SSF54292 501 603 3.01E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Gene3D G3DSA:3.10.20.30 507 605 1.8E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 SUPERFAMILY SSF52343 368 508 1.7E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 1.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 1.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 1.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 1.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 6.7E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 597 1.4E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 4.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 4.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 4.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 4.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 425 436 4.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 8.9E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Gene3D G3DSA:2.40.30.10 278 378 2.3E-26 T 14-10-2018 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 SUPERFAMILY SSF141673 6 133 7.59E-30 T 14-10-2018 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 SUPERFAMILY SSF50800 4 264 3.3E-15 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 Pfam PF03476 MOSC N-terminal beta barrel domain 4 117 1.6E-30 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD94_19855 089fafa10194a9b5781c4de940b22f85 606 SUPERFAMILY SSF63380 279 381 4.49E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_14135 69656620d15bc3dd93bdf74cb79213c8 337 PIRSF PIRSF002825 1 337 4.2E-108 T 14-10-2018 IPR026045 Ferric binding protein BJD94_14135 69656620d15bc3dd93bdf74cb79213c8 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 3.3E-21 T 14-10-2018 BJD94_14135 69656620d15bc3dd93bdf74cb79213c8 337 Gene3D G3DSA:3.40.190.10 120 328 6.0E-127 T 14-10-2018 BJD94_14135 69656620d15bc3dd93bdf74cb79213c8 337 Gene3D G3DSA:3.40.190.10 25 297 6.0E-127 T 14-10-2018 BJD94_14135 69656620d15bc3dd93bdf74cb79213c8 337 SUPERFAMILY SSF53850 24 332 1.27E-77 T 14-10-2018 BJD94_11560 e4e3244124229a291787a251567339f0 844 PIRSF PIRSF001444 1 844 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BJD94_11560 e4e3244124229a291787a251567339f0 844 Pfam PF01295 Adenylate cyclase, class-I 226 829 5.3E-257 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 BJD94_11560 e4e3244124229a291787a251567339f0 844 Pfam PF12633 Adenylate cyclase NT domain 5 198 4.0E-76 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 BJD94_06430 8f88ea4911f57cd9016a20dc5c5e2c19 288 Gene3D G3DSA:3.10.129.90 2 285 1.2E-105 T 14-10-2018 BJD94_06430 8f88ea4911f57cd9016a20dc5c5e2c19 288 SUPERFAMILY SSF54637 116 283 6.06E-59 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_06430 8f88ea4911f57cd9016a20dc5c5e2c19 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 5.5E-94 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 BJD94_06430 8f88ea4911f57cd9016a20dc5c5e2c19 288 Pfam PF13622 Thioesterase-like superfamily 33 282 1.3E-59 T 14-10-2018 BJD94_06430 8f88ea4911f57cd9016a20dc5c5e2c19 288 SUPERFAMILY SSF54637 6 114 6.44E-39 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 SUPERFAMILY SSF52540 4 286 8.65E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.0E-70 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BJD94_12510 96844abbb627fcde05e024c8cf5ff061 289 Gene3D G3DSA:3.40.50.300 1 289 3.9E-112 T 14-10-2018 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 SUPERFAMILY SSF81324 13 210 3.27E-48 T 14-10-2018 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 Gene3D G3DSA:1.20.120.350 6 124 6.8E-16 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily BJD94_09070 7c541f0567628d51762a49ee407264bc 250 PRINTS PR00169 Potassium channel signature 183 209 8.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 PRINTS PR00169 Potassium channel signature 123 146 8.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 PRINTS PR00169 Potassium channel signature 154 176 8.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 Gene3D G3DSA:1.10.287.70 125 217 3.2E-23 T 14-10-2018 BJD94_09070 7c541f0567628d51762a49ee407264bc 250 Pfam PF00520 Ion transport protein 42 209 7.3E-17 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BJD94_19415 81ab039da6faf3c30717dc57a4f7eecd 380 SUPERFAMILY SSF56281 79 319 3.64E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_19415 81ab039da6faf3c30717dc57a4f7eecd 380 Gene3D G3DSA:3.60.15.10 74 316 8.5E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_19415 81ab039da6faf3c30717dc57a4f7eecd 380 SMART SM00849 97 291 7.2E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_19415 81ab039da6faf3c30717dc57a4f7eecd 380 Pfam PF00753 Metallo-beta-lactamase superfamily 98 270 9.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_04280 1ae6497f33c17d28a0344b8ccf60ea06 409 Pfam PF13641 Glycosyltransferase like family 2 66 286 2.0E-14 T 14-10-2018 BJD94_04280 1ae6497f33c17d28a0344b8ccf60ea06 409 Gene3D G3DSA:3.90.550.10 33 284 2.1E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_04280 1ae6497f33c17d28a0344b8ccf60ea06 409 SUPERFAMILY SSF53448 56 330 8.81E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_21375 7f34e933ed2a43ff4f7e24c52480a46d 824 SUPERFAMILY SSF53474 461 737 1.17E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_21375 7f34e933ed2a43ff4f7e24c52480a46d 824 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 278 8.9E-78 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain BJD94_21375 7f34e933ed2a43ff4f7e24c52480a46d 824 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 803 5.9E-162 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family BJD94_20000 d662cec77e20320a314cddc968601d63 407 Pfam PF04932 O-Antigen ligase 185 340 1.9E-13 T 14-10-2018 IPR007016 O-antigen ligase-related BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 Gene3D G3DSA:3.40.190.10 92 291 3.1E-54 T 14-10-2018 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 Gene3D G3DSA:1.10.10.10 1 90 7.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 Gene3D G3DSA:3.40.190.10 164 265 3.1E-54 T 14-10-2018 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 SUPERFAMILY SSF46785 4 112 2.72E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 Pfam PF03466 LysR substrate binding domain 88 294 3.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 SUPERFAMILY SSF53850 89 295 1.02E-39 T 14-10-2018 BJD94_17225 5c64779c5c6ce3955e2ac75466337d62 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_00375 d55682470f08e72e6e0b50c93b8324c9 204 SUPERFAMILY SSF52218 5 180 1.06E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_00375 d55682470f08e72e6e0b50c93b8324c9 204 Pfam PF02525 Flavodoxin-like fold 5 172 1.9E-45 T 14-10-2018 IPR003680 Flavodoxin-like fold BJD94_00375 d55682470f08e72e6e0b50c93b8324c9 204 Gene3D G3DSA:3.40.50.360 3 189 1.5E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 510 1.9E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 SMART SM00304 214 268 8.1E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 SMART SM00304 303 370 42.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 SUPERFAMILY SSF58104 236 544 1.19E-78 T 14-10-2018 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 Gene3D G3DSA:1.10.287.950 213 545 7.5E-78 T 14-10-2018 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 SMART SM00283 283 544 4.2E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_04505 7222f80a9b178f5ef942fb0d18f52d04 545 Pfam PF00672 HAMP domain 215 264 6.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_11440 b0b09dc78eeead6c3d2050bbcf39de99 295 SUPERFAMILY SSF52172 1 124 8.82E-28 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_11440 b0b09dc78eeead6c3d2050bbcf39de99 295 SMART SM00448 1 112 7.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_11440 b0b09dc78eeead6c3d2050bbcf39de99 295 Gene3D G3DSA:3.40.50.12740 1 237 2.1E-29 T 14-10-2018 BJD94_11440 b0b09dc78eeead6c3d2050bbcf39de99 295 Pfam PF00072 Response regulator receiver domain 1 112 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.547 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 4.6E-68 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 Gene3D G3DSA:3.40.50.1470 1 196 4.3E-75 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 8.6E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 SUPERFAMILY SSF53178 5 194 4.71E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BJD94_07485 76cf091f745f57a67e5c6472b503fa55 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 Gene3D G3DSA:1.25.40.10 144 457 1.2E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 SUPERFAMILY SSF52172 14 148 2.42E-19 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 Gene3D G3DSA:3.40.50.2300 9 143 3.6E-17 T 14-10-2018 BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 PIRSF PIRSF011521 9 553 5.9E-274 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 Pfam PF00072 Response regulator receiver domain 18 134 9.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 SMART SM00448 16 134 4.9E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_20880 9e5356f59fcd0f55b90391fd8734dd89 555 SUPERFAMILY SSF48452 179 311 1.42E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 81 103 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 111 126 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 126 142 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 Pfam PF00691 OmpA family 80 175 2.5E-22 T 14-10-2018 IPR006665 OmpA-like domain BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 Gene3D G3DSA:3.30.1330.60 54 181 4.8E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 181 30.793 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 SUPERFAMILY SSF103088 72 181 1.44E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_01530 46004e9c732ca6de3281633b5daf0dc4 181 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 181 1.6E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 Pfam PF02545 Maf-like protein 3 184 1.5E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 Gene3D G3DSA:3.90.950.10 2 186 1.0E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.8E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.926 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 SUPERFAMILY SSF52972 1 184 2.09E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD94_13150 7843cd87a094cf71704982cd808a0e38 186 PIRSF PIRSF006305 1 186 3.7E-58 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 SMART SM00244 22 180 2.4E-58 T 14-10-2018 IPR001107 Band 7 domain BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 PRINTS PR00721 Stomatin signature 132 155 1.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 PRINTS PR00721 Stomatin signature 175 196 1.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 PRINTS PR00721 Stomatin signature 77 98 1.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 PRINTS PR00721 Stomatin signature 112 129 1.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 PRINTS PR00721 Stomatin signature 156 174 1.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 5.6E-34 T 14-10-2018 IPR001107 Band 7 domain BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 Gene3D G3DSA:3.30.479.30 50 182 4.0E-43 T 14-10-2018 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 Pfam PF16200 C-terminal region of band_7 242 301 4.6E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 SUPERFAMILY SSF117892 53 187 1.96E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD94_07180 1f4f4e7f65a676835f64f9e01fdb2c44 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Gene3D G3DSA:3.90.70.10 344 462 2.3E-47 T 14-10-2018 BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 SUPERFAMILY SSF47090 456 530 5.49E-12 T 14-10-2018 IPR036365 PGBD-like superfamily BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Gene3D G3DSA:3.40.50.300 26 184 1.5E-13 T 14-10-2018 BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Gene3D G3DSA:1.10.101.10 463 530 1.2E-27 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 SMART SM00382 42 195 1.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Pfam PF01471 Putative peptidoglycan binding domain 470 525 3.8E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Pfam PF16537 Type II secretion system protein B 653 712 7.3E-24 T 14-10-2018 IPR032389 Type II secretion system protein B BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 Pfam PF13401 AAA domain 42 171 1.5E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_09095 86d7f561cb227a2df774091c14a609ae 718 SUPERFAMILY SSF52540 5 264 2.44E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02715 ef555d3be71eede8b7b8d7ad0ea9fb01 160 Gene3D G3DSA:3.40.630.30 3 145 4.1E-17 T 14-10-2018 BJD94_02715 ef555d3be71eede8b7b8d7ad0ea9fb01 160 SUPERFAMILY SSF55729 6 158 6.97E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02715 ef555d3be71eede8b7b8d7ad0ea9fb01 160 Pfam PF00583 Acetyltransferase (GNAT) family 12 136 6.4E-12 T 14-10-2018 IPR000182 GNAT domain BJD94_01135 43d73767b848d73bdd6c7eb60ae7ead6 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 6.3E-232 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 BJD94_01135 43d73767b848d73bdd6c7eb60ae7ead6 414 Pfam PF02687 FtsX-like permease family 300 407 4.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_01135 43d73767b848d73bdd6c7eb60ae7ead6 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.2E-162 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BJD94_01135 43d73767b848d73bdd6c7eb60ae7ead6 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 1.1E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_00805 1349618897b9e46a031543d08c81eb27 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 7.3E-34 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 BJD94_00805 1349618897b9e46a031543d08c81eb27 154 SMART SM00855 2 116 2.0E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_00805 1349618897b9e46a031543d08c81eb27 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 6.0E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD94_00805 1349618897b9e46a031543d08c81eb27 154 Gene3D G3DSA:3.40.50.1240 1 154 7.4E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_00805 1349618897b9e46a031543d08c81eb27 154 SUPERFAMILY SSF53254 1 144 2.08E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily BJD94_21770 9e24db78bca56592da7d1ef28b69e66f 134 Gene3D G3DSA:3.30.420.270 60 129 2.1E-10 T 14-10-2018 BJD94_21770 9e24db78bca56592da7d1ef28b69e66f 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 6.0E-29 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD94_04615 a7a74acf7c8b37dae944707dfa9056df 280 SUPERFAMILY SSF161098 7 277 3.14E-53 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04615 a7a74acf7c8b37dae944707dfa9056df 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 2.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_04615 a7a74acf7c8b37dae944707dfa9056df 280 Gene3D G3DSA:1.10.3720.10 3 273 4.2E-49 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05280 0da69a854af2493d745c414433893c7d 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 4.5E-26 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE BJD94_05280 0da69a854af2493d745c414433893c7d 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 57 6.3E-30 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE BJD94_10640 e4c370408f222aedff289dd432f5ce31 528 Pfam PF02646 RmuC family 182 477 8.4E-105 T 14-10-2018 IPR003798 DNA recombination RmuC BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 Pfam PF06165 Glycosyltransferase family 36 21 267 8.5E-84 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 SMART SM01068 1 63 9.9E-19 T 14-10-2018 IPR009342 Putative carbohydrate binding domain BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 SUPERFAMILY SSF48208 273 800 7.18E-110 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 Gene3D G3DSA:1.50.10.10 311 722 8.7E-131 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 Gene3D G3DSA:2.70.98.40 1 302 6.4E-114 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.1E-208 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 Gene3D G3DSA:2.60.420.10 723 801 2.4E-31 T 14-10-2018 BJD94_14155 2f7f400e3a1f1366583a23e5faa2fe9f 801 SUPERFAMILY SSF74650 1 269 1.44E-79 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 PIRSF PIRSF019169 1 327 1.5E-87 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 Gene3D G3DSA:3.30.420.40 179 291 8.8E-45 T 14-10-2018 BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 Gene3D G3DSA:3.30.420.40 8 323 8.8E-45 T 14-10-2018 BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 Pfam PF11104 Type IV pilus assembly protein PilM; 8 323 3.8E-47 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 Gene3D G3DSA:3.30.1490.300 82 140 8.8E-45 T 14-10-2018 BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 SUPERFAMILY SSF53067 46 165 1.38E-6 T 14-10-2018 BJD94_12780 3f638199c6f887b1eefaddf5d90d7491 335 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 325 3.2E-69 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD94_18360 f6c69ee32247e3c91addb6deb16f9445 235 Gene3D G3DSA:3.30.1330.60 40 229 2.1E-14 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_18360 f6c69ee32247e3c91addb6deb16f9445 235 SUPERFAMILY SSF103088 95 220 3.14E-10 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_18360 f6c69ee32247e3c91addb6deb16f9445 235 Pfam PF00691 OmpA family 98 209 9.0E-7 T 14-10-2018 IPR006665 OmpA-like domain BJD94_19665 64928784112c715c33d9b3b7a3729128 287 Gene3D G3DSA:1.10.3720.10 61 285 1.3E-35 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19665 64928784112c715c33d9b3b7a3729128 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.4E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_19665 64928784112c715c33d9b3b7a3729128 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 4.5E-99 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BJD94_19665 64928784112c715c33d9b3b7a3729128 287 SUPERFAMILY SSF161098 24 274 3.92E-42 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_08140 aade3b2a8db65ddb5637f4f42f875d50 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.0E-29 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BJD94_08140 aade3b2a8db65ddb5637f4f42f875d50 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.4E-100 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BJD94_08140 aade3b2a8db65ddb5637f4f42f875d50 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.568 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BJD94_08140 aade3b2a8db65ddb5637f4f42f875d50 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 1.4E-133 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BJD94_05430 a8923ec7441308b3e4774ee738aba5e0 177 Pfam PF12915 Protein of unknown function (DUF3833) 17 176 1.9E-66 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 SUPERFAMILY SSF50156 196 291 8.28E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 SMART SM00228 115 186 9.3 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 SMART SM00228 212 281 1.7E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 452 3.5E-141 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 Pfam PF02163 Peptidase family M50 11 440 6.8E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 Gene3D G3DSA:2.30.42.10 226 313 5.7E-18 T 14-10-2018 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 Gene3D G3DSA:2.30.42.10 126 221 8.9E-32 T 14-10-2018 BJD94_00270 4ede7c32fc0f8b37f0dbbf0742dc4542 452 SUPERFAMILY SSF50156 89 185 1.45E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD94_12280 6818942dc88650155b6a25f1b0e7eb43 144 Gene3D G3DSA:3.40.250.10 22 144 1.2E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_12280 6818942dc88650155b6a25f1b0e7eb43 144 Pfam PF00581 Rhodanese-like domain 42 135 1.7E-18 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_12280 6818942dc88650155b6a25f1b0e7eb43 144 SMART SM00450 40 138 1.9E-21 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_12280 6818942dc88650155b6a25f1b0e7eb43 144 SUPERFAMILY SSF52821 16 141 3.27E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_05290 c36a40a7b9a665b33efd11ab5c307720 280 Gene3D G3DSA:1.20.1080.10 27 280 1.9E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_05290 c36a40a7b9a665b33efd11ab5c307720 280 Pfam PF01226 Formate/nitrite transporter 14 275 2.9E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BJD94_05290 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 8.7E-115 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 BJD94_05290 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.4E-79 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BJD94_05290 c36a40a7b9a665b33efd11ab5c307720 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 Gene3D G3DSA:3.20.20.10 51 281 4.0E-131 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 Gene3D G3DSA:2.40.37.20 35 421 4.0E-131 T 14-10-2018 BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 Pfam PF14031 Putative serine dehydratase domain 311 404 7.4E-14 T 14-10-2018 IPR026956 D-serine dehydratase-like domain BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 SUPERFAMILY SSF51419 48 282 6.21E-31 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 Pfam PF01168 Alanine racemase, N-terminal domain 48 251 3.0E-15 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD94_15895 23bbefc04a28e05e68634983c4ebd602 421 SMART SM01119 311 408 1.1E-28 T 14-10-2018 IPR026956 D-serine dehydratase-like domain BJD94_14475 b28dcf917cfa10e5aa5501baf7416c4a 782 SUPERFAMILY SSF141371 142 200 9.22E-5 T 14-10-2018 BJD94_14475 b28dcf917cfa10e5aa5501baf7416c4a 782 Gene3D G3DSA:2.40.10.220 466 588 2.1E-6 T 14-10-2018 BJD94_14475 b28dcf917cfa10e5aa5501baf7416c4a 782 Pfam PF07238 PilZ domain 145 233 3.0E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_14475 b28dcf917cfa10e5aa5501baf7416c4a 782 Pfam PF07238 PilZ domain 470 557 8.3E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_14475 b28dcf917cfa10e5aa5501baf7416c4a 782 SUPERFAMILY SSF141371 466 547 6.87E-6 T 14-10-2018 BJD94_11170 339cbcb4b592895ad420586336b87903 459 SMART SM00382 156 369 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_11170 339cbcb4b592895ad420586336b87903 459 SUPERFAMILY SSF48295 355 458 3.4E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD94_11170 339cbcb4b592895ad420586336b87903 459 SMART SM00760 367 436 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BJD94_11170 339cbcb4b592895ad420586336b87903 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 458 33.112 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD94_11170 339cbcb4b592895ad420586336b87903 459 Gene3D G3DSA:3.40.50.300 109 288 1.1E-49 T 14-10-2018 BJD94_11170 339cbcb4b592895ad420586336b87903 459 Gene3D G3DSA:1.10.8.60 290 360 1.5E-24 T 14-10-2018 BJD94_11170 339cbcb4b592895ad420586336b87903 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 368 436 1.7E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BJD94_11170 339cbcb4b592895ad420586336b87903 459 SUPERFAMILY SSF52540 124 335 5.35E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11170 339cbcb4b592895ad420586336b87903 459 Gene3D G3DSA:1.10.1750.10 366 459 1.4E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD94_11170 339cbcb4b592895ad420586336b87903 459 Pfam PF11638 DnaA N-terminal domain 2 56 3.0E-16 T 14-10-2018 IPR024633 DnaA N-terminal domain BJD94_11170 339cbcb4b592895ad420586336b87903 459 Gene3D G3DSA:3.30.300.180 1 105 5.3E-37 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily BJD94_11170 339cbcb4b592895ad420586336b87903 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD94_11170 339cbcb4b592895ad420586336b87903 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD94_11170 339cbcb4b592895ad420586336b87903 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD94_11170 339cbcb4b592895ad420586336b87903 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD94_11170 339cbcb4b592895ad420586336b87903 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 1.2E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD94_11170 339cbcb4b592895ad420586336b87903 459 Pfam PF00308 Bacterial dnaA protein 125 341 9.7E-98 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BJD94_11170 339cbcb4b592895ad420586336b87903 459 ProSitePatterns PS01008 DnaA protein signature. 417 436 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD94_11170 339cbcb4b592895ad420586336b87903 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 2 457 3.4E-185 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD94_10335 4c161ea6f02eb1af29cae267865698b2 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.5E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD94_10335 4c161ea6f02eb1af29cae267865698b2 135 Gene3D G3DSA:3.30.420.270 61 129 2.6E-10 T 14-10-2018 BJD94_18470 a2182442c9fac5bd0c4ffe915be32783 363 SUPERFAMILY SSF55073 219 361 8.63E-37 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_18470 a2182442c9fac5bd0c4ffe915be32783 363 SMART SM00267 202 363 8.3E-32 T 14-10-2018 IPR000160 GGDEF domain BJD94_18470 a2182442c9fac5bd0c4ffe915be32783 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 360 9.3E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_18470 a2182442c9fac5bd0c4ffe915be32783 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 360 4.9E-31 T 14-10-2018 IPR000160 GGDEF domain BJD94_18470 a2182442c9fac5bd0c4ffe915be32783 363 Gene3D G3DSA:3.30.70.270 210 363 7.1E-39 T 14-10-2018 BJD94_03015 523818474532b919a23c7921baac5332 149 Pfam PF10711 Hypothetical protein (DUF2513) 2 120 1.7E-10 T 14-10-2018 IPR019650 Protein of unknown function DUF2513 BJD94_16385 465266f0707e4609235b13f56a309a57 336 Gene3D G3DSA:1.10.10.60 232 334 1.9E-17 T 14-10-2018 BJD94_16385 465266f0707e4609235b13f56a309a57 336 SMART SM00342 248 329 1.5E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_16385 465266f0707e4609235b13f56a309a57 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 1.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_16385 465266f0707e4609235b13f56a309a57 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 1.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD94_16385 465266f0707e4609235b13f56a309a57 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 193 2.9E-10 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal BJD94_16385 465266f0707e4609235b13f56a309a57 336 SUPERFAMILY SSF46689 287 333 8.06E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_16385 465266f0707e4609235b13f56a309a57 336 Pfam PF12833 Helix-turn-helix domain 255 331 2.0E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_09345 7f3e4499cf01b3abcd137e37a96b3496 348 SUPERFAMILY SSF53756 1 306 5.1E-13 T 14-10-2018 BJD94_09345 7f3e4499cf01b3abcd137e37a96b3496 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 310 8.1E-97 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 BJD94_09345 7f3e4499cf01b3abcd137e37a96b3496 348 Gene3D G3DSA:3.40.50.2000 174 317 6.6E-7 T 14-10-2018 BJD94_09345 7f3e4499cf01b3abcd137e37a96b3496 348 Pfam PF13528 Glycosyl transferase family 1 1 300 6.1E-44 T 14-10-2018 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 SUPERFAMILY SSF54919 1 140 4.06E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.8E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.8E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.8E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.8E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.8E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 SMART SM00562 3 140 4.3E-90 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.668 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 Gene3D G3DSA:3.30.70.141 1 141 4.1E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD94_08195 3b33ad09267dce80ec9e573692423bbb 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.1E-57 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD94_11490 e1da8eba192567a8c56da31ba84f6a40 680 Gene3D G3DSA:1.10.1370.40 13 675 1.5E-266 T 14-10-2018 BJD94_11490 e1da8eba192567a8c56da31ba84f6a40 680 SUPERFAMILY SSF55486 1 677 1.59E-211 T 14-10-2018 BJD94_11490 e1da8eba192567a8c56da31ba84f6a40 680 Pfam PF01432 Peptidase family M3 222 677 5.5E-163 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD94_11490 e1da8eba192567a8c56da31ba84f6a40 680 Gene3D G3DSA:1.10.1370.10 140 610 1.5E-266 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 Gene3D G3DSA:1.10.10.10 2 83 4.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 SUPERFAMILY SSF53850 90 302 9.93E-17 T 14-10-2018 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 SUPERFAMILY SSF46785 4 86 1.75E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 Pfam PF03466 LysR substrate binding domain 87 302 8.1E-14 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 Gene3D G3DSA:3.40.190.10 166 271 1.3E-12 T 14-10-2018 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 5.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_21420 5e08c9fc57781395e1df7e9f281d8e35 304 Gene3D G3DSA:3.40.190.10 92 165 1.3E-12 T 14-10-2018 BJD94_06350 5b78f00371724bd0f3e5de71b16f2796 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 27 150 36.953 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_06350 5b78f00371724bd0f3e5de71b16f2796 154 SUPERFAMILY SSF51316 25 151 1.99E-56 T 14-10-2018 IPR011057 Mss4-like superfamily BJD94_06350 5b78f00371724bd0f3e5de71b16f2796 154 Gene3D G3DSA:2.170.150.20 16 154 1.9E-59 T 14-10-2018 BJD94_06350 5b78f00371724bd0f3e5de71b16f2796 154 Pfam PF01641 SelR domain 30 148 2.1E-52 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_06350 5b78f00371724bd0f3e5de71b16f2796 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 26 151 2.8E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD94_20760 70c90ca6749e362635293d821f7908b2 251 Gene3D G3DSA:3.40.50.300 1 250 1.4E-64 T 14-10-2018 BJD94_20760 70c90ca6749e362635293d821f7908b2 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_20760 70c90ca6749e362635293d821f7908b2 251 SMART SM00382 26 213 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20760 70c90ca6749e362635293d821f7908b2 251 SUPERFAMILY SSF52540 2 226 2.37E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20760 70c90ca6749e362635293d821f7908b2 251 Pfam PF00005 ABC transporter 20 164 3.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_15115 25d6ce12893d1e395e27895e4d9f593b 159 Gene3D G3DSA:2.30.110.20 2 158 1.9E-33 T 14-10-2018 IPR036624 Hcp1-like superfamily BJD94_15115 25d6ce12893d1e395e27895e4d9f593b 159 SUPERFAMILY SSF141452 4 157 1.7E-35 T 14-10-2018 IPR036624 Hcp1-like superfamily BJD94_15115 25d6ce12893d1e395e27895e4d9f593b 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 4.1E-28 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp BJD94_18925 83eead7cf13401b8f88b7e533fd26417 250 Pfam PF10014 2OG-Fe dioxygenase 51 243 1.3E-61 T 14-10-2018 IPR018724 2OG-Fe dioxygenase BJD94_18925 83eead7cf13401b8f88b7e533fd26417 250 Gene3D G3DSA:2.60.120.620 8 249 8.7E-79 T 14-10-2018 BJD94_19690 55c982db6885b5bf67dec92f491fbdba 323 SMART SM00327 85 286 2.2E-22 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_19690 55c982db6885b5bf67dec92f491fbdba 323 Gene3D G3DSA:3.40.50.410 84 286 1.3E-62 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_19690 55c982db6885b5bf67dec92f491fbdba 323 Pfam PF00092 von Willebrand factor type A domain 87 279 3.3E-35 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_19690 55c982db6885b5bf67dec92f491fbdba 323 SUPERFAMILY SSF53300 85 282 4.9E-40 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 Gene3D G3DSA:3.30.360.10 133 351 1.0E-39 T 14-10-2018 BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 125 7.8E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 223 1.2E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 Gene3D G3DSA:3.40.50.720 3 132 2.5E-27 T 14-10-2018 BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 SUPERFAMILY SSF55347 136 327 1.01E-26 T 14-10-2018 BJD94_10140 01ce8a7852f82b5c5a2f382fd6fb5692 351 SUPERFAMILY SSF51735 4 154 1.75E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 Gene3D G3DSA:2.160.10.10 1 200 8.6E-68 T 14-10-2018 BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 SUPERFAMILY SSF51161 3 196 8.04E-55 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 SMART SM01266 4 58 2.5E-16 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 Pfam PF12464 Maltose acetyltransferase 6 57 9.2E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD94_20735 1e2af71ce9927074efb7eef0f4268be5 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.1E-12 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 SUPERFAMILY SSF52518 382 554 2.59E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 PIRSF PIRSF004983 3 564 1.5E-192 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 436 4.4E-138 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Gene3D G3DSA:3.40.50.970 4 198 5.7E-58 T 14-10-2018 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 539 9.3E-6 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Gene3D G3DSA:3.40.50.970 359 562 1.0E-46 T 14-10-2018 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 142 1.9E-27 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 394 7.0E-44 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Gene3D G3DSA:3.40.50.1220 216 342 2.5E-42 T 14-10-2018 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 SUPERFAMILY SSF52467 220 346 9.09E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 560 32.886 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BJD94_06555 369383338cbd263b0051fb5a9a06d723 564 SUPERFAMILY SSF52518 9 181 2.62E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 SUPERFAMILY SSF51445 615 933 2.2E-36 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 Gene3D G3DSA:2.60.40.10 255 351 2.8E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 Gene3D G3DSA:2.60.40.10 418 514 1.0E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 SMART SM00636 616 929 0.0024 T 14-10-2018 IPR011583 Chitinase II GO:0008061 BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 Gene3D G3DSA:2.60.40.10 516 607 4.9E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 Gene3D G3DSA:2.60.40.10 161 254 1.4E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_02390 f5e19481e37e4746f854a22fb3935418 950 Pfam PF00704 Glycosyl hydrolases family 18 618 928 2.7E-20 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 Gene3D G3DSA:3.40.190.10 341 353 2.9E-11 T 14-10-2018 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 Pfam PF13416 Bacterial extracellular solute-binding protein 47 327 1.5E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 SUPERFAMILY SSF53850 23 391 7.91E-89 T 14-10-2018 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 Gene3D G3DSA:3.40.190.10 134 279 1.0E-135 T 14-10-2018 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 Gene3D G3DSA:3.40.190.10 354 392 2.9E-11 T 14-10-2018 BJD94_18200 8ef7b3fe8a68dfe2233c8a3e1fd33e13 392 Gene3D G3DSA:3.40.190.10 24 338 1.0E-135 T 14-10-2018 BJD94_02055 b9aeee3af4c4c9a0149216f679ecb0c1 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.2E-71 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 5.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 Gene3D G3DSA:1.20.1740.10 3 400 4.5E-14 T 14-10-2018 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 387 9.7E-112 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.1E-113 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 BJD94_02145 9c6d4197873b27406c5b34be37f35b50 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 Gene3D G3DSA:2.40.30.10 1 107 3.0E-24 T 14-10-2018 BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 Pfam PF00175 Oxidoreductase NAD-binding domain 124 234 1.6E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 SUPERFAMILY SSF63380 12 107 2.89E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 Gene3D G3DSA:3.40.50.80 110 259 1.7E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 Pfam PF00970 Oxidoreductase FAD-binding domain 28 101 3.7E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD94_17215 05ec7a38ab35bcfc5d6aa6a0e50e30d0 259 SUPERFAMILY SSF52343 117 259 7.73E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 6.9E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 SUPERFAMILY SSF51351 2 250 3.67E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 Gene3D G3DSA:3.20.20.70 1 256 5.5E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_12630 64397f510c23b01e22dadb72f321b8af 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.393 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_14345 6685ccc0ac2f526bc450be94be82210f 1180 Gene3D G3DSA:2.60.200.60 55 95 4.0E-11 T 14-10-2018 BJD94_14345 6685ccc0ac2f526bc450be94be82210f 1180 Pfam PF05488 PAAR motif 18 86 2.2E-22 T 14-10-2018 IPR008727 PAAR motif BJD94_14345 6685ccc0ac2f526bc450be94be82210f 1180 Gene3D G3DSA:2.60.200.60 1 54 8.2E-12 T 14-10-2018 BJD94_06900 a363ad338852692b67b169fefe8983b0 198 SUPERFAMILY SSF54593 3 197 2.98E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_06900 a363ad338852692b67b169fefe8983b0 198 Pfam PF06185 YecM protein 12 196 1.4E-70 T 14-10-2018 IPR010393 Protein of unknown function DUF991 BJD94_06900 a363ad338852692b67b169fefe8983b0 198 Gene3D G3DSA:3.10.180.10 6 198 1.5E-64 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 Pfam PF00202 Aminotransferase class-III 22 399 4.1E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 Gene3D G3DSA:3.90.1150.10 25 392 2.5E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 PIRSF PIRSF000521 172 402 2.5E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 PIRSF PIRSF000521 25 156 1.9E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 Gene3D G3DSA:3.40.640.10 59 304 2.5E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.7E-207 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 SUPERFAMILY SSF53383 16 400 5.17E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.174 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BJD94_12485 4702008b473563d0c97aa08644ebfb98 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.2E-152 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 Pfam PF01327 Polypeptide deformylase 4 152 1.9E-47 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.681 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 PRINTS PR01576 Peptide deformylase signature 101 119 2.1E-31 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 PRINTS PR01576 Peptide deformylase signature 89 100 2.1E-31 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-31 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 PRINTS PR01576 Peptide deformylase signature 120 149 2.1E-31 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 Gene3D G3DSA:3.90.45.10 1 168 3.9E-66 T 14-10-2018 IPR036821 Peptide deformylase superfamily BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.7E-49 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 PIRSF PIRSF004749 1 168 1.7E-53 T 14-10-2018 IPR023635 Peptide deformylase BJD94_16765 0d0869fe53e8a75c3c149d4dd818afeb 168 SUPERFAMILY SSF56420 2 165 5.5E-57 T 14-10-2018 IPR036821 Peptide deformylase superfamily BJD94_06760 770e2eb890bfb943ab71fc0bec6592f7 148 Pfam PF13279 Thioesterase-like superfamily 18 119 3.2E-12 T 14-10-2018 BJD94_06760 770e2eb890bfb943ab71fc0bec6592f7 148 SUPERFAMILY SSF54637 9 145 3.28E-30 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_06760 770e2eb890bfb943ab71fc0bec6592f7 148 Gene3D G3DSA:3.10.129.10 11 140 4.9E-26 T 14-10-2018 BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 SUPERFAMILY SSF82689 435 526 1.96E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 SUPERFAMILY SSF50182 367 432 5.23E-13 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 Gene3D G3DSA:3.30.70.100 432 528 2.8E-9 T 14-10-2018 BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 Pfam PF00924 Mechanosensitive ion channel 325 526 2.4E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 SUPERFAMILY SSF82861 282 365 5.89E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 Gene3D G3DSA:2.30.30.60 382 430 2.2E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_17055 a5d26b10202e4e307acc5ba1c9ed8cd0 537 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 396 430 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 Gene3D G3DSA:3.50.50.60 1 137 5.8E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 SUPERFAMILY SSF51905 1 428 2.03E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 PIRSF PIRSF000141 2 430 1.6E-181 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 427 50.156 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 Pfam PF00890 FAD binding domain 5 411 3.5E-71 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_20340 789b310943a6f2ebea03fca24c5da998 438 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 1.9E-189 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Gene3D G3DSA:3.10.20.310 186 262 5.2E-19 T 14-10-2018 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Pfam PF01103 Surface antigen 275 568 5.7E-30 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Gene3D G3DSA:2.40.160.50 263 571 1.3E-98 T 14-10-2018 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Pfam PF17243 POTRA domain TamA domain 1 26 95 7.9E-18 T 14-10-2018 IPR035243 TamA, POTRA domain 1 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Gene3D G3DSA:3.10.20.310 22 97 9.8E-20 T 14-10-2018 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Pfam PF07244 Surface antigen variable number repeat 106 178 8.2E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD94_09640 bac13e06a478159538cd88228e764dc5 571 Gene3D G3DSA:3.10.20.310 98 185 1.8E-30 T 14-10-2018 BJD94_19155 ef5fcc7230a9021be3a578bdc181469c 279 SUPERFAMILY SSF53613 12 272 3.27E-82 T 14-10-2018 IPR029056 Ribokinase-like BJD94_19155 ef5fcc7230a9021be3a578bdc181469c 279 Pfam PF08543 Phosphomethylpyrimidine kinase 21 269 4.1E-96 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD94_19155 ef5fcc7230a9021be3a578bdc181469c 279 Gene3D G3DSA:3.40.1190.20 2 278 2.4E-102 T 14-10-2018 IPR029056 Ribokinase-like BJD94_19155 ef5fcc7230a9021be3a578bdc181469c 279 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 271 3.8E-99 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD94_09295 80aa2a428cb8b306798550fbee6dc45a 359 PIRSF PIRSF039026 5 359 2.0E-135 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like BJD94_09295 80aa2a428cb8b306798550fbee6dc45a 359 Gene3D G3DSA:3.40.190.10 154 325 8.8E-118 T 14-10-2018 BJD94_09295 80aa2a428cb8b306798550fbee6dc45a 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 323 2.1E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BJD94_09295 80aa2a428cb8b306798550fbee6dc45a 359 Gene3D G3DSA:3.40.190.170 36 346 8.8E-118 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BJD94_08220 6079d440050761eb594575f07b77633a 171 SUPERFAMILY SSF46565 1 73 7.59E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_08220 6079d440050761eb594575f07b77633a 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.9E-42 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_08220 6079d440050761eb594575f07b77633a 171 Gene3D G3DSA:1.10.287.110 1 79 2.1E-23 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_08220 6079d440050761eb594575f07b77633a 171 Gene3D G3DSA:1.20.1280.20 80 171 3.8E-28 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_08220 6079d440050761eb594575f07b77633a 171 SUPERFAMILY SSF47144 78 170 6.93E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_08220 6079d440050761eb594575f07b77633a 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.735 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_08220 6079d440050761eb594575f07b77633a 171 SMART SM00271 1 66 3.4E-10 T 14-10-2018 IPR001623 DnaJ domain BJD94_08220 6079d440050761eb594575f07b77633a 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 3.4E-20 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_08220 6079d440050761eb594575f07b77633a 171 Pfam PF00226 DnaJ domain 2 70 7.5E-8 T 14-10-2018 IPR001623 DnaJ domain BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 362 3.7E-163 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 Pfam PF00266 Aminotransferase class-V 8 352 1.4E-65 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 Gene3D G3DSA:3.90.1150.10 262 364 9.1E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.891 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 PIRSF PIRSF000525 2 364 4.9E-155 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 Gene3D G3DSA:3.40.640.10 21 261 4.9E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_04910 733901ae0ee8378fc4e681466f70bae5 364 SUPERFAMILY SSF53383 8 362 4.19E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_09915 ea48ba7b4ee3be728a649e9313a773e6 90 SUPERFAMILY SSF82771 4 82 2.35E-16 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD94_09915 ea48ba7b4ee3be728a649e9313a773e6 90 Pfam PF01541 GIY-YIG catalytic domain 8 69 2.2E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease BJD94_09915 ea48ba7b4ee3be728a649e9313a773e6 90 Gene3D G3DSA:3.40.1440.10 1 89 9.3E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 2.5E-165 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 SUPERFAMILY SSF51419 14 242 4.14E-42 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 PIRSF PIRSF038941 1 372 5.3E-131 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 Gene3D G3DSA:2.40.37.10 7 372 1.7E-142 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 SUPERFAMILY SSF50621 212 359 5.44E-23 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 Gene3D G3DSA:3.20.20.10 15 242 1.7E-142 T 14-10-2018 IPR029066 PLP-binding barrel BJD94_05890 63e62d2aaf5a61b67523842bd68d3614 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.6E-4 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BJD94_21450 877121a433122fca16e946c7f9243136 551 SUPERFAMILY SSF52540 227 407 2.13E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21450 877121a433122fca16e946c7f9243136 551 Pfam PF09818 Predicted ATPase of the ABC class 2 433 1.5E-181 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative BJD94_04695 7fb9e5ca572535e9489b7790a944f32a 378 Pfam PF04209 homogentisate 1,2-dioxygenase 88 375 3.3E-20 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BJD94_04695 7fb9e5ca572535e9489b7790a944f32a 378 SUPERFAMILY SSF51182 56 375 1.21E-88 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_04695 7fb9e5ca572535e9489b7790a944f32a 378 Gene3D G3DSA:2.60.120.10 68 167 4.1E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_12815 67203def5062fc6afe455dc7ded6a8b8 498 Gene3D G3DSA:3.30.70.1070 400 495 2.4E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_12815 67203def5062fc6afe455dc7ded6a8b8 498 SUPERFAMILY SSF52540 15 224 6.64E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12815 67203def5062fc6afe455dc7ded6a8b8 498 Gene3D G3DSA:3.40.50.300 11 161 5.2E-7 T 14-10-2018 BJD94_12815 67203def5062fc6afe455dc7ded6a8b8 498 Pfam PF13401 AAA domain 29 130 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_12815 67203def5062fc6afe455dc7ded6a8b8 498 Pfam PF05036 Sporulation related domain 411 484 5.9E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 SUPERFAMILY SSF50331 235 353 1.24E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 SUPERFAMILY SSF52540 1 241 2.66E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 Gene3D G3DSA:3.40.50.300 1 220 1.9E-65 T 14-10-2018 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 Gene3D G3DSA:2.40.50.140 279 338 2.5E-27 T 14-10-2018 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 Pfam PF00005 ABC transporter 19 160 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 Gene3D G3DSA:2.40.50.940 221 347 2.5E-27 T 14-10-2018 BJD94_04620 e92bf8e64eb5f21c41e0566ebd500c7b 372 SMART SM00382 27 210 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 SUPERFAMILY SSF51735 124 304 2.58E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 Gene3D G3DSA:3.40.50.720 128 309 2.5E-131 T 14-10-2018 BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 Pfam PF00107 Zinc-binding dehydrogenase 159 290 3.0E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 2.8E-41 T 14-10-2018 BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 SMART SM00829 20 337 1.7E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 SUPERFAMILY SSF50129 5 144 7.19E-42 T 14-10-2018 IPR011032 GroES-like superfamily BJD94_15490 66b6a8b4393702a5c067f944d0564c0b 343 Gene3D G3DSA:3.90.180.10 17 337 2.5E-131 T 14-10-2018 BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.4E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 SUPERFAMILY SSF53448 1 249 7.09E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Gene3D G3DSA:3.90.550.10 1 224 4.1E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.619 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 SUPERFAMILY SSF51161 252 434 8.07E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Gene3D G3DSA:2.160.10.10 225 453 1.6E-70 T 14-10-2018 BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.6E-205 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 296 5.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_11060 5c283ee44b4892ca8cb359d922c51157 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 330 1.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_13290 7d95f949944955a88e7be5ba8f2f11a1 101 SUPERFAMILY SSF52794 1 101 9.68E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_13290 7d95f949944955a88e7be5ba8f2f11a1 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.7E-24 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_13290 7d95f949944955a88e7be5ba8f2f11a1 101 Gene3D G3DSA:3.40.50.2300 2 101 2.8E-38 T 14-10-2018 BJD94_15155 2d701824f094a34ef0499753156a2f7b 170 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 3.1E-61 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD94_15155 2d701824f094a34ef0499753156a2f7b 170 PIRSF PIRSF028301 1 170 6.7E-66 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD94_15155 2d701824f094a34ef0499753156a2f7b 170 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 1.1E-60 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 129 293 1.4E-131 T 14-10-2018 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 9.6E-125 T 14-10-2018 IPR017861 Kae1/TsaD family BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 Pfam PF00814 Glycoprotease family 24 307 1.6E-103 T 14-10-2018 IPR000905 Gcp-like domain BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 SUPERFAMILY SSF53067 1 311 3.89E-43 T 14-10-2018 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 3 315 1.4E-131 T 14-10-2018 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.67 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BJD94_09130 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.3E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.8E-141 T 14-10-2018 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 Gene3D G3DSA:1.20.1250.20 19 223 6.8E-53 T 14-10-2018 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 SUPERFAMILY SSF103473 11 431 1.23E-80 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 Pfam PF07690 Major Facilitator Superfamily 36 396 2.4E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 Gene3D G3DSA:1.20.1250.20 238 438 6.4E-44 T 14-10-2018 BJD94_15530 1d6d723cffa61ce07489f58b79d97059 446 PIRSF PIRSF002808 7 443 1.8E-145 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 SMART SM00116 84 131 1.1E-6 T 14-10-2018 IPR000644 CBS domain BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 SMART SM00116 11 59 7.4E-9 T 14-10-2018 IPR000644 CBS domain BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 Gene3D G3DSA:3.10.580.10 1 150 1.0E-52 T 14-10-2018 BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 SUPERFAMILY SSF54631 1 132 2.27E-33 T 14-10-2018 BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 Pfam PF00571 CBS domain 4 58 1.8E-13 T 14-10-2018 IPR000644 CBS domain BJD94_08295 e02351ded14322ee2c4e94a89f4ab797 151 Pfam PF00571 CBS domain 79 127 1.3E-9 T 14-10-2018 IPR000644 CBS domain BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 SUPERFAMILY SSF46589 14 99 1.2E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 SUPERFAMILY SSF55681 92 327 3.65E-83 T 14-10-2018 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.3E-112 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.346 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 Gene3D G3DSA:3.30.930.10 7 327 5.4E-127 T 14-10-2018 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.4E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD94_02505 4f3e3e82d6af6d5898a596333b4a5f3c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.8E-107 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BJD94_13955 ba0f30a7dea0e0a16db962ac49852489 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.658 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BJD94_13955 ba0f30a7dea0e0a16db962ac49852489 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 9.0E-25 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 BJD94_13955 ba0f30a7dea0e0a16db962ac49852489 64 SUPERFAMILY SSF57716 2 62 4.99E-22 T 14-10-2018 BJD94_13955 ba0f30a7dea0e0a16db962ac49852489 64 Gene3D G3DSA:3.30.50.10 1 64 6.1E-25 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 182 3.6E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 Gene3D G3DSA:1.10.150.240 17 80 1.1E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 Gene3D G3DSA:3.40.50.1000 5 185 1.1E-50 T 14-10-2018 IPR023214 HAD superfamily BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 9.9E-33 T 14-10-2018 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20030 a574bdc8db80f69ecd7d9a060b62a608 215 SUPERFAMILY SSF56784 1 212 1.82E-50 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_03115 dbaf52991049bdb060436b274be7727b 171 Gene3D G3DSA:3.40.630.30 2 164 1.8E-37 T 14-10-2018 BJD94_03115 dbaf52991049bdb060436b274be7727b 171 SUPERFAMILY SSF55729 2 150 1.39E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03115 dbaf52991049bdb060436b274be7727b 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 5.0E-28 T 14-10-2018 IPR000182 GNAT domain BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 Gene3D G3DSA:3.40.50.720 26 317 3.7E-113 T 14-10-2018 BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 2.2E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 SUPERFAMILY SSF52283 4 139 7.75E-33 T 14-10-2018 BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 SUPERFAMILY SSF51735 103 290 3.75E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 Gene3D G3DSA:3.40.50.720 99 288 3.7E-113 T 14-10-2018 BJD94_13190 edcbb06996ce43873249d50fb1b471c5 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.4E-57 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 3.6E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_08690 e387b4449584719722245a6088221218 475 Pfam PF01235 Sodium:alanine symporter family 48 452 4.3E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_20455 01fe9f8ce2b104f65d11417e790a27a8 237 Pfam PF01925 Sulfite exporter TauE/SafE 10 230 1.3E-21 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_02370 245094d44a8367bdfbbb6e921be3fa9a 155 Pfam PF07811 TadE-like protein 9 49 2.8E-9 T 14-10-2018 IPR012495 TadE-like BJD94_19485 2787f87622b208a021eab59213950baa 367 SUPERFAMILY SSF82689 252 351 4.18E-22 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD94_19485 2787f87622b208a021eab59213950baa 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BJD94_19485 2787f87622b208a021eab59213950baa 367 SUPERFAMILY SSF50182 180 247 3.6E-18 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_19485 2787f87622b208a021eab59213950baa 367 Pfam PF00924 Mechanosensitive ion channel 138 342 1.4E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_19485 2787f87622b208a021eab59213950baa 367 Gene3D G3DSA:3.30.70.100 249 346 4.5E-18 T 14-10-2018 BJD94_19485 2787f87622b208a021eab59213950baa 367 Gene3D G3DSA:2.30.30.60 196 248 2.7E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_19485 2787f87622b208a021eab59213950baa 367 SUPERFAMILY SSF82861 100 179 1.44E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BJD94_02000 9405bf0faef2163f1a7868a678ed8614 208 Gene3D G3DSA:3.90.79.10 23 203 2.6E-48 T 14-10-2018 BJD94_02000 9405bf0faef2163f1a7868a678ed8614 208 Pfam PF00293 NUDIX domain 45 162 3.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_02000 9405bf0faef2163f1a7868a678ed8614 208 SUPERFAMILY SSF55811 42 197 3.11E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 Gene3D G3DSA:1.10.10.10 122 218 7.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 SUPERFAMILY SSF52172 1 118 2.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 Gene3D G3DSA:3.40.50.2300 1 121 2.0E-36 T 14-10-2018 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 Pfam PF00072 Response regulator receiver domain 4 112 8.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 1.3E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 SMART SM00862 145 216 2.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 SUPERFAMILY SSF46894 118 216 1.05E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_18445 2d4793fdb2f1a8a01bbe701f36594420 218 SMART SM00448 1 112 1.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04880 1ff618f20e3d08519826e1d6c5c74c32 291 Pfam PF10977 Protein of unknown function (DUF2797) 55 287 4.3E-96 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 BJD94_15550 85b555f733ee40afe204e628ab34d7f4 387 Pfam PF06738 Putative threonine/serine exporter 97 230 6.0E-15 T 14-10-2018 IPR010619 Putative threonine/serine exporter BJD94_15550 85b555f733ee40afe204e628ab34d7f4 387 Pfam PF12821 Threonine/Serine exporter, ThrE 255 376 2.6E-7 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE BJD94_03145 bd5e7d3eb59b88b6fc09c75c5d830244 122 SUPERFAMILY SSF54593 3 121 3.71E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03145 bd5e7d3eb59b88b6fc09c75c5d830244 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 8.5E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_03145 bd5e7d3eb59b88b6fc09c75c5d830244 122 Gene3D G3DSA:3.10.180.10 1 122 9.8E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_06105 e4c3e720f2bc54c8655ed8ba13c83832 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.0E-75 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BJD94_06105 e4c3e720f2bc54c8655ed8ba13c83832 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.759 T 14-10-2018 IPR010119 Gluconeogenesis factor BJD94_06105 e4c3e720f2bc54c8655ed8ba13c83832 296 Gene3D G3DSA:3.40.50.12300 5 296 4.5E-80 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily BJD94_06105 e4c3e720f2bc54c8655ed8ba13c83832 296 SUPERFAMILY SSF142338 7 290 3.14E-83 T 14-10-2018 BJD94_06105 e4c3e720f2bc54c8655ed8ba13c83832 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 283 2.9E-103 T 14-10-2018 IPR010119 Gluconeogenesis factor BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 Pfam PF01590 GAF domain 47 178 4.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 SMART SM00267 181 352 1.1E-59 T 14-10-2018 IPR000160 GGDEF domain BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 Gene3D G3DSA:3.30.70.270 188 354 5.4E-57 T 14-10-2018 BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 350 5.6E-50 T 14-10-2018 IPR000160 GGDEF domain BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 SUPERFAMILY SSF55781 28 178 9.81E-19 T 14-10-2018 BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 348 4.2E-48 T 14-10-2018 IPR000160 GGDEF domain BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 SUPERFAMILY SSF55073 196 350 1.88E-49 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 Gene3D G3DSA:3.30.450.40 23 187 3.6E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_19035 4ff3096dc534507188f411ffd4bd9127 357 SMART SM00065 44 188 5.9E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_01270 8c67340c391e47063678cd8eb9b771dc 181 Gene3D G3DSA:1.20.1270.340 1 98 9.1E-14 T 14-10-2018 IPR038338 PriB/PriC superfamily BJD94_01270 8c67340c391e47063678cd8eb9b771dc 181 Pfam PF07445 Primosomal replication protein priC 8 178 1.2E-49 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC BJD94_21055 ae739acc7ce767cc1724caa0d75320f5 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 487 1.6E-109 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BJD94_21055 ae739acc7ce767cc1724caa0d75320f5 495 Pfam PF07690 Major Facilitator Superfamily 17 408 2.7E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_21055 ae739acc7ce767cc1724caa0d75320f5 495 SUPERFAMILY SSF103473 10 489 7.98E-61 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_21055 ae739acc7ce767cc1724caa0d75320f5 495 Gene3D G3DSA:1.20.1250.20 259 493 2.4E-13 T 14-10-2018 BJD94_21055 ae739acc7ce767cc1724caa0d75320f5 495 Gene3D G3DSA:1.20.1720.10 14 207 2.0E-46 T 14-10-2018 BJD94_04180 0f619b7f488ba38741a2b8253bb01481 350 SUPERFAMILY SSF51569 8 347 9.32E-130 T 14-10-2018 BJD94_04180 0f619b7f488ba38741a2b8253bb01481 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.1E-160 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_04180 0f619b7f488ba38741a2b8253bb01481 350 Pfam PF00793 DAHP synthetase I family 42 338 2.7E-100 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD94_04180 0f619b7f488ba38741a2b8253bb01481 350 Gene3D G3DSA:3.20.20.70 1 350 8.8E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_04180 0f619b7f488ba38741a2b8253bb01481 350 PIRSF PIRSF001361 2 350 6.1E-156 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD94_04235 8f23253c290bd1e829ebd102483ce137 377 Gene3D G3DSA:3.40.50.2000 34 360 1.2E-46 T 14-10-2018 BJD94_04235 8f23253c290bd1e829ebd102483ce137 377 Gene3D G3DSA:3.40.50.2000 180 347 1.2E-46 T 14-10-2018 BJD94_04235 8f23253c290bd1e829ebd102483ce137 377 Pfam PF13579 Glycosyl transferase 4-like domain 34 185 1.2E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_04235 8f23253c290bd1e829ebd102483ce137 377 Pfam PF13692 Glycosyl transferases group 1 199 325 1.2E-22 T 14-10-2018 BJD94_04235 8f23253c290bd1e829ebd102483ce137 377 SUPERFAMILY SSF53756 27 361 2.15E-57 T 14-10-2018 BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 SMART SM00248 152 181 1000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 SMART SM00248 185 214 890.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 SMART SM00248 77 106 0.77 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 SMART SM00248 44 73 950.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 SUPERFAMILY SSF48403 46 221 1.3E-23 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD94_15070 cec5ddcb964f278ac9a05b1ccbe0c80c 276 Gene3D G3DSA:1.25.40.20 21 255 2.2E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD94_00470 b0133032c1cf3dc049d5823b62b61c07 156 PIRSF PIRSF000239 1 147 6.7E-18 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_00470 b0133032c1cf3dc049d5823b62b61c07 156 SUPERFAMILY SSF52833 3 154 8.54E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_00470 b0133032c1cf3dc049d5823b62b61c07 156 Gene3D G3DSA:3.40.30.10 2 155 6.6E-46 T 14-10-2018 BJD94_00470 b0133032c1cf3dc049d5823b62b61c07 156 Pfam PF00578 AhpC/TSA family 7 134 3.7E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 SMART SM00895 99 227 3.7E-18 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 Pfam PF07729 FCD domain 99 226 2.4E-17 T 14-10-2018 IPR011711 GntR, C-terminal BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.20.120.530 97 236 6.8E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.10.10.10 1 74 4.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF48008 98 235 1.15E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 SMART SM00345 15 74 1.3E-27 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD94_14000 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF46785 5 76 2.73E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_09285 626a98e0931832d96bf6be33d7705661 238 PIRSF PIRSF029033 1 238 5.1E-103 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein BJD94_09285 626a98e0931832d96bf6be33d7705661 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 4.5E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04994 TfoX C-terminal domain 114 193 2.5E-28 T 14-10-2018 IPR007077 TfoX, C-terminal BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 SUPERFAMILY SSF159894 3 102 4.97E-29 T 14-10-2018 BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 PIRSF PIRSF028788 4 194 7.8E-40 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:1.10.150.20 113 194 6.3E-18 T 14-10-2018 BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.2E-26 T 14-10-2018 IPR007076 TfoX, N-terminal BJD94_04935 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:3.30.1460.30 3 102 7.6E-21 T 14-10-2018 BJD94_08065 bf2730a9ec915c471b9c6cd1b8285839 251 Pfam PF05742 Transport and Golgi organisation 2 1 120 8.4E-9 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 SUPERFAMILY SSF51395 4 365 1.18E-107 T 14-10-2018 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 Gene3D G3DSA:3.50.50.60 471 623 2.6E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 2.1E-8 T 14-10-2018 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 2.1E-8 T 14-10-2018 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 629 3.5E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 SUPERFAMILY SSF51971 335 519 7.42E-39 T 14-10-2018 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 SUPERFAMILY SSF51905 374 646 7.16E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 Gene3D G3DSA:3.40.50.720 377 664 2.6E-104 T 14-10-2018 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 Gene3D G3DSA:3.20.20.70 4 370 3.7E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_06325 b959e822c3235a1209e8f6441bb2619d 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 330 7.1E-82 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD94_17100 3db13615e8c049daea7ea608abd6a097 264 SUPERFAMILY SSF46689 212 260 5.73E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17100 3db13615e8c049daea7ea608abd6a097 264 SMART SM00342 177 259 3.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_17100 3db13615e8c049daea7ea608abd6a097 264 Gene3D G3DSA:1.10.10.60 158 262 1.2E-23 T 14-10-2018 BJD94_17100 3db13615e8c049daea7ea608abd6a097 264 Pfam PF12833 Helix-turn-helix domain 184 260 2.6E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 Pfam PF00318 Ribosomal protein S2 9 224 6.1E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.9E-106 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.85 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:1.10.287.610 103 150 4.4E-91 T 14-10-2018 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 SUPERFAMILY SSF52313 6 232 3.92E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BJD94_00235 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:3.40.50.10490 8 218 4.4E-91 T 14-10-2018 BJD94_16560 75c3c5f4eea9af2cf360239019c5838e 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 3.7E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_16560 75c3c5f4eea9af2cf360239019c5838e 222 Gene3D G3DSA:1.10.3720.10 3 217 1.2E-41 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_16560 75c3c5f4eea9af2cf360239019c5838e 222 SUPERFAMILY SSF161098 9 202 9.94E-32 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_16560 75c3c5f4eea9af2cf360239019c5838e 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 2.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 SMART SM00487 214 392 1.6E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 SUPERFAMILY SSF51306 834 955 2.62E-11 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Gene3D G3DSA:3.30.870.10 7 182 1.4E-20 T 14-10-2018 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Pfam PF00271 Helicase conserved C-terminal domain 436 542 1.8E-10 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 SMART SM00490 460 544 5.6E-8 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Gene3D G3DSA:3.40.50.300 204 381 3.2E-44 T 14-10-2018 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Gene3D G3DSA:2.10.109.10 842 967 8.5E-9 T 14-10-2018 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 SUPERFAMILY SSF52540 264 552 2.0E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Pfam PF13091 PLD-like domain 25 155 1.3E-9 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Pfam PF04851 Type III restriction enzyme, res subunit 216 365 4.4E-33 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 SUPERFAMILY SSF56024 15 154 1.05E-6 T 14-10-2018 BJD94_01595 ea0fd7ae6598be6c50a431913503fdc7 968 Gene3D G3DSA:3.40.50.300 384 576 1.5E-39 T 14-10-2018 BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Pfam PF07694 5TMR of 5TMR-LYT 26 194 9.3E-61 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 SUPERFAMILY SSF55874 420 553 8.32E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Gene3D G3DSA:3.30.565.10 409 557 2.4E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Pfam PF06580 Histidine kinase 367 444 1.9E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Gene3D G3DSA:1.10.1760.20 32 203 6.5E-6 T 14-10-2018 BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Gene3D G3DSA:3.30.450.40 226 352 4.2E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 Pfam PF13492 GAF domain 241 351 6.8E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_08525 89afcd7ae117251687e0f4aed20de16a 560 SUPERFAMILY SSF55781 228 351 3.08E-7 T 14-10-2018 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 340 4.2E-62 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 SUPERFAMILY SSF64518 171 637 3.66E-23 T 14-10-2018 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 580 637 6.8E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_07260 2b5f1bb7865820135562ddb1faf24cbf 638 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD94_19920 7479449044627a6754ab951bf0e080e0 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 4.0E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD94_17675 6514a48b4d01267c367042eed54415f4 233 Gene3D G3DSA:2.40.33.20 2 232 2.0E-71 T 14-10-2018 BJD94_17675 6514a48b4d01267c367042eed54415f4 233 Pfam PF03475 3-alpha domain 173 215 1.3E-12 T 14-10-2018 IPR005163 3-alpha domain BJD94_17675 6514a48b4d01267c367042eed54415f4 233 SUPERFAMILY SSF50800 3 227 1.41E-70 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD94_17675 6514a48b4d01267c367042eed54415f4 233 Pfam PF03473 MOSC domain 49 163 4.3E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BJD94_20960 bfc942fd4242529ed6db59d211f8b648 538 SUPERFAMILY SSF53649 40 486 3.63E-121 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_20960 bfc942fd4242529ed6db59d211f8b648 538 Pfam PF00884 Sulfatase 44 370 5.0E-65 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_20960 bfc942fd4242529ed6db59d211f8b648 538 Gene3D G3DSA:3.40.720.10 41 445 8.7E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.5E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.0E-17 T 14-10-2018 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 SMART SM00344 6 115 2.3E-46 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF46785 4 65 8.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF54909 66 151 1.47E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:3.30.70.920 58 152 7.2E-27 T 14-10-2018 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:1.10.10.10 1 57 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_17725 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_03955 79d1518eeb3fb15453bade9f05d1bdcf 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 7.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_03955 79d1518eeb3fb15453bade9f05d1bdcf 285 Gene3D G3DSA:1.10.3720.10 6 277 7.6E-54 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_03955 79d1518eeb3fb15453bade9f05d1bdcf 285 SUPERFAMILY SSF161098 9 274 2.49E-54 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_13370 999be9cae9f136b7793298ce7654912e 240 SUPERFAMILY SSF56281 16 234 8.8E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_13370 999be9cae9f136b7793298ce7654912e 240 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 2.8E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_13370 999be9cae9f136b7793298ce7654912e 240 SMART SM00849 29 218 3.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_13370 999be9cae9f136b7793298ce7654912e 240 Gene3D G3DSA:3.60.15.10 17 235 1.5E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_02070 a590465a3649a53c9b2070c892a6c485 158 Pfam PF00072 Response regulator receiver domain 7 125 9.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_02070 a590465a3649a53c9b2070c892a6c485 158 Gene3D G3DSA:3.40.50.2300 1 134 1.2E-22 T 14-10-2018 BJD94_02070 a590465a3649a53c9b2070c892a6c485 158 SUPERFAMILY SSF52172 1 133 3.7E-23 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_02070 a590465a3649a53c9b2070c892a6c485 158 SMART SM00448 4 125 2.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.5E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 Gene3D G3DSA:3.90.870.10 1 206 2.0E-89 T 14-10-2018 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 SUPERFAMILY SSF142695 205 367 1.29E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 Pfam PF00925 GTP cyclohydrolase II 207 367 3.7E-40 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 PIRSF PIRSF001259 3 369 6.8E-131 T 14-10-2018 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.88 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 SUPERFAMILY SSF55821 3 202 2.17E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BJD94_07845 557623999c9bcc06583a17b9b8dd5c4f 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 6.4E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_20835 ae71f0e771b1b0bc0cb12a4017c87238 603 Gene3D G3DSA:3.90.1580.10 380 601 1.8E-55 T 14-10-2018 BJD94_20835 ae71f0e771b1b0bc0cb12a4017c87238 603 Pfam PF03781 Sulfatase-modifying factor enzyme 1 381 601 2.1E-50 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD94_20835 ae71f0e771b1b0bc0cb12a4017c87238 603 SUPERFAMILY SSF56436 379 601 3.77E-57 T 14-10-2018 IPR016187 C-type lectin fold BJD94_20835 ae71f0e771b1b0bc0cb12a4017c87238 603 Pfam PF08308 PEGA domain 295 359 5.7E-24 T 14-10-2018 IPR013229 PEGA BJD94_11520 ab920a1e981da9656601ec5e34d7f98a 141 SUPERFAMILY SSF52402 3 138 1.34E-32 T 14-10-2018 BJD94_11520 ab920a1e981da9656601ec5e34d7f98a 141 Gene3D G3DSA:3.40.50.620 2 141 6.0E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_11520 ab920a1e981da9656601ec5e34d7f98a 141 PIRSF PIRSF006276 1 141 2.1E-53 T 14-10-2018 IPR006015 Universal stress protein A BJD94_11520 ab920a1e981da9656601ec5e34d7f98a 141 Pfam PF00582 Universal stress protein family 3 138 1.3E-20 T 14-10-2018 IPR006016 UspA BJD94_15220 41f43ff3ad443ef562a236deb3bf5ca4 87 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 17 82 6.6E-29 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor BJD94_15220 41f43ff3ad443ef562a236deb3bf5ca4 87 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 28 82 9.0E-26 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor BJD94_15950 f4674a8be67372e344647bf3cd0b500a 139 SUPERFAMILY SSF54593 10 135 1.29E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_15950 f4674a8be67372e344647bf3cd0b500a 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 3.5E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_15950 f4674a8be67372e344647bf3cd0b500a 139 Gene3D G3DSA:3.10.180.10 11 139 9.2E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 SUPERFAMILY SSF52833 29 142 3.57E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.4E-7 T 14-10-2018 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.4E-7 T 14-10-2018 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.4E-7 T 14-10-2018 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 Pfam PF00085 Thioredoxin 43 140 1.1E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 Gene3D G3DSA:3.40.30.10 41 143 1.3E-33 T 14-10-2018 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 PIRSF PIRSF000077 38 142 9.8E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 2.1E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD94_21720 4690590e9bc7ed9a039c58bd97752b4a 144 Gene3D G3DSA:2.20.28.140 2 37 2.0E-14 T 14-10-2018 BJD94_07165 01ccdee7517bb84869777f4a6591a942 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 230 5.7E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD94_07165 01ccdee7517bb84869777f4a6591a942 308 Gene3D G3DSA:3.40.50.720 6 308 3.0E-76 T 14-10-2018 BJD94_07165 01ccdee7517bb84869777f4a6591a942 308 Pfam PF08338 Domain of unknown function (DUF1731) 257 303 1.5E-14 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 BJD94_07165 01ccdee7517bb84869777f4a6591a942 308 SUPERFAMILY SSF51735 5 301 8.0E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_07165 01ccdee7517bb84869777f4a6591a942 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 7 300 2.2E-102 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 BJD94_13165 ed11b701b75db33f3e02184a177135cf 274 Gene3D G3DSA:3.60.110.10 1 269 1.8E-93 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_13165 ed11b701b75db33f3e02184a177135cf 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site BJD94_13165 ed11b701b75db33f3e02184a177135cf 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 4.7E-58 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD94_13165 ed11b701b75db33f3e02184a177135cf 274 SUPERFAMILY SSF56317 3 263 1.44E-84 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_03420 0f96ec7774807d343fd817ea34b39d01 122 Gene3D G3DSA:3.10.180.10 1 122 9.6E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03420 0f96ec7774807d343fd817ea34b39d01 122 SUPERFAMILY SSF54593 3 121 2.2E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03420 0f96ec7774807d343fd817ea34b39d01 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.8E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_07020 247fbe617f23a45ba6737ca53cf1df3f 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 1.0E-69 T 14-10-2018 IPR013559 YheO-like BJD94_07020 247fbe617f23a45ba6737ca53cf1df3f 222 Pfam PF13309 HTH domain 160 217 2.2E-12 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain BJD94_07020 247fbe617f23a45ba6737ca53cf1df3f 222 Pfam PF08348 YheO-like PAS domain 17 123 3.8E-36 T 14-10-2018 IPR013559 YheO-like BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 Gene3D G3DSA:3.40.50.300 1 321 1.6E-98 T 14-10-2018 BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.3E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 SUPERFAMILY SSF52540 31 301 9.1E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 Pfam PF00005 ABC transporter 24 180 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_06060 78e83cd0705692728724d8d9352ca56e 323 SMART SM00382 32 238 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04115 20da9498572beeb4cf907fc48a2ddf44 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BJD94_04115 20da9498572beeb4cf907fc48a2ddf44 1613 SUPERFAMILY SSF51735 945 1281 1.38E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_04115 20da9498572beeb4cf907fc48a2ddf44 1613 SUPERFAMILY SSF53223 754 940 7.0E-26 T 14-10-2018 BJD94_04115 20da9498572beeb4cf907fc48a2ddf44 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BJD94_09375 0e0ebfe491013b23301d4141e0fa28e7 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.915 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BJD94_09375 0e0ebfe491013b23301d4141e0fa28e7 200 Gene3D G3DSA:3.20.19.10 1 180 9.9E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD94_09375 0e0ebfe491013b23301d4141e0fa28e7 200 SUPERFAMILY SSF52016 1 193 3.53E-60 T 14-10-2018 BJD94_09375 0e0ebfe491013b23301d4141e0fa28e7 200 Pfam PF00694 Aconitase C-terminal domain 1 125 5.6E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BJD94_09375 0e0ebfe491013b23301d4141e0fa28e7 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.3E-97 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BJD94_21780 696a470e243011d294fe92fdc487b8d3 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 322 426 3.5E-29 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_21780 696a470e243011d294fe92fdc487b8d3 455 PIRSF PIRSF037714 2 452 1.1E-159 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 Pfam PF03023 MviN-like protein 21 465 5.8E-142 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 467 18.983 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PIRSF PIRSF002869 1 509 2.2E-147 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 503 1.5E-132 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 45 61 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 26 45 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 357 376 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 409 426 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 157 178 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 259 285 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_08560 73f446564e5c5ee8aa0a3b5b9539a6fb 511 PRINTS PR01806 Virulence factor MviN signature 133 157 5.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD94_16330 0a7cd2dd375a78f158ca2f2da7e4dc45 157 Pfam PF08534 Redoxin 4 154 4.5E-39 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BJD94_16330 0a7cd2dd375a78f158ca2f2da7e4dc45 157 Gene3D G3DSA:3.40.30.10 2 157 1.1E-59 T 14-10-2018 BJD94_16330 0a7cd2dd375a78f158ca2f2da7e4dc45 157 SUPERFAMILY SSF52833 1 156 2.67E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_10815 bf571125245027d9995806c03867a6ce 595 SUPERFAMILY SSF55920 303 559 1.57E-54 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD94_10815 bf571125245027d9995806c03867a6ce 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 131 2.1E-18 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BJD94_10815 bf571125245027d9995806c03867a6ce 595 Gene3D G3DSA:3.40.350.10 1 146 6.8E-36 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD94_10815 bf571125245027d9995806c03867a6ce 595 SUPERFAMILY SSF53092 7 130 5.76E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD94_10815 bf571125245027d9995806c03867a6ce 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 9.1E-33 T 14-10-2018 BJD94_10815 bf571125245027d9995806c03867a6ce 595 Gene3D G3DSA:3.90.230.10 300 593 2.0E-93 T 14-10-2018 BJD94_10815 bf571125245027d9995806c03867a6ce 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.5E-21 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain BJD94_10815 bf571125245027d9995806c03867a6ce 595 Pfam PF00557 Metallopeptidase family M24 310 524 1.2E-42 T 14-10-2018 IPR000994 Peptidase M24 BJD94_10815 bf571125245027d9995806c03867a6ce 595 Gene3D G3DSA:3.40.350.10 147 289 7.5E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD94_09985 3d197effbb751413777c70d0f612e28b 239 PIRSF PIRSF028162 1 239 1.9E-92 T 14-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted BJD94_09985 3d197effbb751413777c70d0f612e28b 239 Gene3D G3DSA:3.90.550.10 1 239 1.5E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_09985 3d197effbb751413777c70d0f612e28b 239 SUPERFAMILY SSF53448 2 238 6.91E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 SMART SM00248 68 97 0.0085 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 SMART SM00248 35 64 4400.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 SMART SM00248 101 132 1900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 Pfam PF12796 Ankyrin repeats (3 copies) 43 122 2.1E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 SUPERFAMILY SSF48403 39 157 1.99E-23 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD94_19305 b5d15b29b46633fe8d3dc3821e30b765 168 Gene3D G3DSA:1.25.40.20 24 162 3.6E-22 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-115 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 SUPERFAMILY SSF117143 93 223 5.75E-33 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.7E-38 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.1E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD94_07280 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.5E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD94_00465 1bf1a8c4b3586d909473da87412ff53c 356 Pfam PF01594 AI-2E family transporter 20 345 1.9E-78 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like BJD94_11495 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:1.10.10.10 4 59 9.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_11495 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF46785 7 68 9.7E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_11495 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_11495 696352469e86ac92a0062087aa898da7 154 SMART SM00344 8 115 2.2E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD94_11495 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:3.30.70.920 60 142 2.0E-31 T 14-10-2018 BJD94_11495 696352469e86ac92a0062087aa898da7 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD94_11495 696352469e86ac92a0062087aa898da7 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.7E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_11495 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_11495 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_11495 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD94_04940 62bfbde5213a394a37841b6b97bb1a8b 306 Gene3D G3DSA:1.10.3210.10 19 302 1.2E-39 T 14-10-2018 BJD94_04940 62bfbde5213a394a37841b6b97bb1a8b 306 Pfam PF08668 HDOD domain 39 235 3.0E-38 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD94_04940 62bfbde5213a394a37841b6b97bb1a8b 306 SUPERFAMILY SSF109604 25 301 1.0E-43 T 14-10-2018 BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 Gene3D G3DSA:3.30.420.10 155 309 1.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 Pfam PF00665 Integrase core domain 160 267 4.8E-13 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 Gene3D G3DSA:1.10.10.60 1 33 5.1E-6 T 14-10-2018 BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 Pfam PF13936 Helix-turn-helix domain 1 33 2.4E-10 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain BJD94_03215 a7eaf4623e47cca2d09ec8b08bf84782 310 SUPERFAMILY SSF53098 163 307 2.66E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_04085 65d15c977afb1e1887b3fb5b5b86225b 573 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 553 573 0.0015 T 14-10-2018 IPR020008 GlyGly-CTERM domain BJD94_04085 65d15c977afb1e1887b3fb5b5b86225b 573 Pfam PF11949 Protein of unknown function (DUF3466) 6 191 9.5E-12 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 BJD94_04085 65d15c977afb1e1887b3fb5b5b86225b 573 Pfam PF11949 Protein of unknown function (DUF3466) 230 573 9.6E-55 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 BJD94_20290 265739540c2fca15291aa12f600bc586 312 Gene3D G3DSA:3.40.190.100 109 218 4.6E-97 T 14-10-2018 BJD94_20290 265739540c2fca15291aa12f600bc586 312 Gene3D G3DSA:3.40.190.10 28 289 4.6E-97 T 14-10-2018 BJD94_20290 265739540c2fca15291aa12f600bc586 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 280 6.0E-63 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BJD94_20290 265739540c2fca15291aa12f600bc586 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 19 306 1.6E-147 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 BJD94_20290 265739540c2fca15291aa12f600bc586 312 SUPERFAMILY SSF53850 20 295 1.93E-90 T 14-10-2018 BJD94_14630 955ec6754980eeaaf7617b690320e19c 291 Gene3D G3DSA:3.40.50.1110 77 288 6.1E-38 T 14-10-2018 IPR036514 SGNH hydrolase superfamily BJD94_14630 955ec6754980eeaaf7617b690320e19c 291 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 124 274 1.1E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD94_14630 955ec6754980eeaaf7617b690320e19c 291 SUPERFAMILY SSF52266 102 284 1.98E-42 T 14-10-2018 BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:1.10.10.2830 117 230 4.9E-33 T 14-10-2018 BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 Pfam PF02195 ParB-like nuclease domain 42 130 2.7E-29 T 14-10-2018 IPR003115 ParB/Sulfiredoxin BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 2.2E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:3.90.1530.30 53 116 7.5E-28 T 14-10-2018 BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 SMART SM00470 40 130 1.1E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin BJD94_11110 31949c4cc981f4daafc08fa174f62b2c 293 SUPERFAMILY SSF110849 43 174 1.36E-33 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 242 4.7E-32 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 Gene3D G3DSA:3.30.1240.10 91 198 2.3E-74 T 14-10-2018 BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 SUPERFAMILY SSF56784 12 275 3.31E-69 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 14-10-2018 BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 271 1.6E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 Gene3D G3DSA:3.40.50.1000 14 267 2.3E-74 T 14-10-2018 IPR023214 HAD superfamily BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 223 245 - T 14-10-2018 BJD94_11620 d644ada3773cc4ab2d9f7d94e316d194 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 271 1.4E-65 T 14-10-2018 BJD94_03980 2cdef2a88034bf7b176f487052828308 310 Gene3D G3DSA:3.40.50.620 2 265 5.8E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_03980 2cdef2a88034bf7b176f487052828308 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.701 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 BJD94_03980 2cdef2a88034bf7b176f487052828308 310 Pfam PF01171 PP-loop family 43 202 2.1E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BJD94_03980 2cdef2a88034bf7b176f487052828308 310 PIRSF PIRSF004976 1 274 5.3E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 BJD94_03980 2cdef2a88034bf7b176f487052828308 310 SUPERFAMILY SSF52402 29 255 2.0E-56 T 14-10-2018 BJD94_14415 8a6e31ea8f9cd9c616440d79f7baddf8 150 Pfam PF00583 Acetyltransferase (GNAT) family 15 121 2.9E-14 T 14-10-2018 IPR000182 GNAT domain BJD94_14415 8a6e31ea8f9cd9c616440d79f7baddf8 150 SUPERFAMILY SSF55729 1 145 1.89E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_14415 8a6e31ea8f9cd9c616440d79f7baddf8 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 1.7E-37 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BJD94_14415 8a6e31ea8f9cd9c616440d79f7baddf8 150 Gene3D G3DSA:3.40.630.30 4 147 1.9E-40 T 14-10-2018 BJD94_06245 0df115e88fb8dc473a54e7fa82971557 478 Pfam PF03553 Na+/H+ antiporter family 161 453 9.7E-66 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BJD94_06245 0df115e88fb8dc473a54e7fa82971557 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.3E-162 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 1.2E-34 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 1.2E-34 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.2E-34 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 1.2E-34 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 1.2E-34 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 SUPERFAMILY SSF52833 1 101 2.24E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 Pfam PF13192 Thioredoxin domain 120 195 3.6E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 Gene3D G3DSA:3.40.30.80 1 200 1.7E-64 T 14-10-2018 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 SUPERFAMILY SSF51905 204 516 3.06E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 Gene3D G3DSA:3.50.50.60 328 451 5.9E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.2E-254 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 PIRSF PIRSF000238 1 522 1.9E-257 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 9.5E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 Gene3D G3DSA:3.50.50.60 213 510 5.9E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_15465 8316924e257429a6d65cf2686e51d2ef 522 SUPERFAMILY SSF52833 104 197 7.12E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_09465 5ee584ce605d6555d512c64d4327ade1 322 Pfam PF16868 NMT1-like family 30 319 2.0E-96 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family BJD94_09465 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 117 255 1.2E-110 T 14-10-2018 BJD94_09465 5ee584ce605d6555d512c64d4327ade1 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 319 2.5E-112 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family BJD94_09465 5ee584ce605d6555d512c64d4327ade1 322 SUPERFAMILY SSF53850 25 321 3.21E-88 T 14-10-2018 BJD94_09465 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 30 319 1.2E-110 T 14-10-2018 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 Gene3D G3DSA:3.40.630.10 91 432 2.9E-105 T 14-10-2018 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 3.7E-102 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 SUPERFAMILY SSF53187 104 427 2.86E-99 T 14-10-2018 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 69.769 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PIRSF PIRSF036388 1 432 1.2E-221 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD94_08200 2ced1187e04aee64b5411131d156bb57 432 Pfam PF12404 Peptidase 5 81 4.5E-32 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 BJD94_12850 7a2f826fd0b123e5c2f5aa682910bb36 247 Gene3D G3DSA:2.40.160.10 12 127 3.6E-5 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_12850 7a2f826fd0b123e5c2f5aa682910bb36 247 Pfam PF04338 Protein of unknown function, DUF481 32 247 6.1E-51 T 14-10-2018 IPR007433 Protein of unknown function DUF481 BJD94_21170 e096f865287a7fbd2e9e731ccf7b992e 191 SUPERFAMILY SSF56925 26 191 1.31E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_21170 e096f865287a7fbd2e9e731ccf7b992e 191 Pfam PF13505 Outer membrane protein beta-barrel domain 5 191 8.2E-21 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_21170 e096f865287a7fbd2e9e731ccf7b992e 191 Gene3D G3DSA:2.40.160.20 25 191 5.4E-25 T 14-10-2018 BJD94_16985 d37b745217535550b5a9d850935ce9cb 679 SUPERFAMILY SSF53474 72 617 1.32E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16985 d37b745217535550b5a9d850935ce9cb 679 Pfam PF00135 Carboxylesterase family 73 616 2.1E-62 T 14-10-2018 IPR002018 Carboxylesterase, type B BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 SMART SM00642 22 383 2.2E-26 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 SUPERFAMILY SSF51445 30 423 1.08E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 Pfam PF00128 Alpha amylase, catalytic domain 42 246 5.8E-17 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 Gene3D G3DSA:3.20.20.80 18 388 5.0E-79 T 14-10-2018 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 PRINTS PR00110 Alpha-amylase signature 97 108 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 PRINTS PR00110 Alpha-amylase signature 305 317 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 PRINTS PR00110 Alpha-amylase signature 210 221 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 PRINTS PR00110 Alpha-amylase signature 239 257 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_19980 4d757fc5d47310f01da81a4d12b7015f 459 PRINTS PR00110 Alpha-amylase signature 64 81 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD94_02220 53319a4fe328b2c6e0d5b5e275259d03 332 Gene3D G3DSA:3.90.550.10 1 206 1.1E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_02220 53319a4fe328b2c6e0d5b5e275259d03 332 SUPERFAMILY SSF53448 3 216 1.95E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_02220 53319a4fe328b2c6e0d5b5e275259d03 332 Pfam PF00535 Glycosyl transferase family 2 8 158 7.3E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD94_10260 f8e3923f0882f32f8a67778e7d431563 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.3E-44 T 14-10-2018 IPR013527 YicC-like, N-terminal BJD94_10260 f8e3923f0882f32f8a67778e7d431563 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 4.1E-119 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BJD94_10260 f8e3923f0882f32f8a67778e7d431563 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.3E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 BJD94_15735 42a37c4afd8f3fbad9841b4bbfafdab8 341 Pfam PF02628 Cytochrome oxidase assembly protein 6 317 3.3E-84 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 136 154 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 166 188 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 79 98 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 2 21 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 42 66 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 PRINTS PR00783 Major intrinsic protein family signature 205 225 4.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.1E-59 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 Pfam PF00230 Major intrinsic protein 2 222 1.9E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 Gene3D G3DSA:1.20.1080.10 1 227 6.9E-85 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.121 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 BJD94_00945 5df74c4e47cfabfdb0b81b83bd4f711f 231 SUPERFAMILY SSF81338 2 229 2.49E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD94_02910 324aede4bd0edfd3ec0e109cd94b77f1 147 SUPERFAMILY SSF55729 6 141 7.6E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02910 324aede4bd0edfd3ec0e109cd94b77f1 147 Pfam PF13673 Acetyltransferase (GNAT) domain 48 136 1.2E-8 T 14-10-2018 IPR000182 GNAT domain BJD94_02910 324aede4bd0edfd3ec0e109cd94b77f1 147 Gene3D G3DSA:3.40.630.30 3 144 4.2E-15 T 14-10-2018 BJD94_16445 adb72db8fb1ccbd932b8534cf3996b1a 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 552 1.0E-106 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BJD94_16445 adb72db8fb1ccbd932b8534cf3996b1a 564 Pfam PF02652 L-lactate permease 7 547 4.9E-109 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BJD94_00510 41725179642e9248e2e3fb3147273c50 95 PIRSF PIRSF037266 1 94 4.7E-42 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 BJD94_00510 41725179642e9248e2e3fb3147273c50 95 Pfam PF09904 Winged helix-turn helix 4 91 1.5E-38 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 BJD94_00510 41725179642e9248e2e3fb3147273c50 95 Gene3D G3DSA:1.10.10.10 2 95 3.0E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09980 a27349524ef106ea82b898d2f2d91503 321 Pfam PF07507 WavE lipopolysaccharide synthesis 7 316 6.6E-61 T 14-10-2018 IPR011122 WavE lipopolysaccharide synthesis BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 Pfam PF04851 Type III restriction enzyme, res subunit 19 251 7.8E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 Gene3D G3DSA:3.40.50.300 19 287 6.2E-51 T 14-10-2018 BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 Gene3D G3DSA:3.40.50.300 445 636 5.2E-37 T 14-10-2018 BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 SUPERFAMILY SSF52540 14 237 8.92E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 SMART SM00487 17 310 0.0074 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 SUPERFAMILY SSF52540 41 600 2.3E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 Pfam PF13307 Helicase C-terminal domain 462 619 6.8E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD94_06885 bd326cc58553b0e1d710e5dc536864a4 639 SMART SM00491 477 606 2.9E-45 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD94_03265 b1a8ddd28ad72b5bf570c33bd481c9ab 137 SUPERFAMILY SSF54593 9 133 1.34E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03265 b1a8ddd28ad72b5bf570c33bd481c9ab 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 5.5E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_03265 b1a8ddd28ad72b5bf570c33bd481c9ab 137 Gene3D G3DSA:3.10.180.10 6 135 3.4E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_00965 e74866a2003638cbfa09f12119bdab6d 131 SUPERFAMILY SSF54593 2 127 1.03E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_00965 e74866a2003638cbfa09f12119bdab6d 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 7.1E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_00965 e74866a2003638cbfa09f12119bdab6d 131 Gene3D G3DSA:3.10.180.10 1 129 6.2E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 7.3E-156 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 PIRSF PIRSF037215 1 408 3.0E-182 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 Pfam PF07687 Peptidase dimerisation domain 206 285 1.2E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 SUPERFAMILY SSF53187 1 406 1.39E-79 T 14-10-2018 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 4.6E-13 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 Gene3D G3DSA:3.30.70.360 209 319 9.7E-175 T 14-10-2018 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.395 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 SUPERFAMILY SSF55031 209 320 2.3E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD94_15615 0bf2f18c5e78a7a47b735f00bb730edf 409 Gene3D G3DSA:3.40.630.10 4 400 9.7E-175 T 14-10-2018 BJD94_07880 e7f1eef36baed5aed200bd85782c7323 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 9.4E-235 T 14-10-2018 IPR010520 UPF0255 family BJD94_07880 e7f1eef36baed5aed200bd85782c7323 415 SUPERFAMILY SSF53474 46 410 2.53E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_07880 e7f1eef36baed5aed200bd85782c7323 415 Gene3D G3DSA:3.40.50.1820 18 415 5.4E-121 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_07880 e7f1eef36baed5aed200bd85782c7323 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.006 T 14-10-2018 IPR010520 UPF0255 family BJD94_03225 3cc9facf468afc185ed784206a72742d 89 Gene3D G3DSA:3.30.2310.20 7 89 1.5E-41 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_03225 3cc9facf468afc185ed784206a72742d 89 SUPERFAMILY SSF143011 8 88 1.22E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_03225 3cc9facf468afc185ed784206a72742d 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 10 89 5.8E-37 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 BJD94_03225 3cc9facf468afc185ed784206a72742d 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 89 7.0E-44 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 BJD94_11795 4190024995da7dff8c04d878897e61e6 152 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 136 8.3E-18 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 BJD94_11795 4190024995da7dff8c04d878897e61e6 152 SUPERFAMILY SSF54928 56 143 2.96E-26 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 BJD94_11795 4190024995da7dff8c04d878897e61e6 152 Gene3D G3DSA:3.30.70.330 49 148 2.9E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD94_11795 4190024995da7dff8c04d878897e61e6 152 SMART SM00360 66 138 1.1E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 SMART SM00671 61 96 4.8E-4 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 SMART SM00671 26 60 11.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 SMART SM00671 97 132 76.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 Gene3D G3DSA:1.25.40.10 3 191 3.5E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 SUPERFAMILY SSF46565 264 320 7.46E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 Gene3D G3DSA:1.10.287.110 254 323 1.7E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 Pfam PF08238 Sel1 repeat 27 60 0.094 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 Pfam PF08238 Sel1 repeat 99 129 4.1 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 Pfam PF08238 Sel1 repeat 63 96 0.012 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_02560 99feb0f65d37f34985c950833c6d2709 323 SUPERFAMILY SSF81901 8 134 7.85E-19 T 14-10-2018 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 Pfam PF16363 GDP-mannose 4,6 dehydratase 2 316 1.8E-54 T 14-10-2018 IPR016040 NAD(P)-binding domain BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 PRINTS PR01713 Nucleotide sugar epimerase signature 248 263 5.8E-5 T 14-10-2018 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 PRINTS PR01713 Nucleotide sugar epimerase signature 223 238 5.8E-5 T 14-10-2018 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 PRINTS PR01713 Nucleotide sugar epimerase signature 287 304 5.8E-5 T 14-10-2018 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 Gene3D G3DSA:3.90.25.10 186 321 1.1E-139 T 14-10-2018 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 327 9.3E-136 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 SUPERFAMILY SSF51735 2 328 5.63E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_14640 c013a585c36e7c649f1fcdafc260f103 331 Gene3D G3DSA:3.40.50.720 1 266 1.1E-139 T 14-10-2018 BJD94_15040 e139a3b8d6babf62a452570b33cb0d25 447 Pfam PF01523 Putative modulator of DNA gyrase 24 311 5.1E-42 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD94_15040 e139a3b8d6babf62a452570b33cb0d25 447 SUPERFAMILY SSF111283 7 445 8.89E-94 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD94_15040 e139a3b8d6babf62a452570b33cb0d25 447 Gene3D G3DSA:3.30.2290.10 3 216 1.2E-33 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD94_02695 23089b3b65f6a9500c796ed8c0289b38 170 Pfam PF13527 Acetyltransferase (GNAT) domain 41 123 1.4E-12 T 14-10-2018 BJD94_02695 23089b3b65f6a9500c796ed8c0289b38 170 Gene3D G3DSA:3.40.630.30 10 162 2.0E-13 T 14-10-2018 BJD94_02695 23089b3b65f6a9500c796ed8c0289b38 170 SUPERFAMILY SSF55729 37 156 2.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_08795 950ab89b0812bf864188e0ec2857ef3b 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 3.6E-23 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 BJD94_08795 950ab89b0812bf864188e0ec2857ef3b 142 PIRSF PIRSF026426 1 142 1.9E-50 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 BJD94_10200 bb280ec07a89ded618a9764c989ae38d 658 Gene3D G3DSA:3.40.720.10 276 583 7.8E-35 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_10200 bb280ec07a89ded618a9764c989ae38d 658 Pfam PF00884 Sulfatase 282 572 1.4E-21 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_10200 bb280ec07a89ded618a9764c989ae38d 658 SUPERFAMILY SSF53649 296 589 1.85E-25 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_15640 b2049687cfc2bd960f30825d77a29636 723 Gene3D G3DSA:3.40.50.410 468 652 8.3E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_15640 b2049687cfc2bd960f30825d77a29636 723 SUPERFAMILY SSF53300 470 650 3.18E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_18640 41cea3258d5b41d5a996ec9faccb6c76 440 Gene3D G3DSA:2.40.30.170 60 361 1.6E-33 T 14-10-2018 BJD94_18640 41cea3258d5b41d5a996ec9faccb6c76 440 Gene3D G3DSA:2.40.420.20 362 424 1.6E-33 T 14-10-2018 BJD94_18640 41cea3258d5b41d5a996ec9faccb6c76 440 Gene3D G3DSA:1.10.287.470 103 218 1.6E-33 T 14-10-2018 BJD94_18640 41cea3258d5b41d5a996ec9faccb6c76 440 SUPERFAMILY SSF111369 60 323 3.14E-8 T 14-10-2018 BJD94_18640 41cea3258d5b41d5a996ec9faccb6c76 440 Gene3D G3DSA:2.40.50.100 66 252 1.6E-33 T 14-10-2018 BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.14 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.0E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 PIRSF PIRSF002211 1 58 8.9E-29 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 SUPERFAMILY SSF55129 1 58 2.75E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-28 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BJD94_09790 e59cf10e460999beb540b76881ed0a06 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.5E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_19045 0f39b3420b9e882572c950353ba169a9 261 Gene3D G3DSA:3.40.190.10 119 215 4.1E-23 T 14-10-2018 BJD94_19045 0f39b3420b9e882572c950353ba169a9 261 SMART SM00062 33 250 0.0023 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_19045 0f39b3420b9e882572c950353ba169a9 261 Gene3D G3DSA:3.40.190.10 38 244 4.1E-23 T 14-10-2018 BJD94_19045 0f39b3420b9e882572c950353ba169a9 261 SUPERFAMILY SSF53850 32 244 1.41E-30 T 14-10-2018 BJD94_19045 0f39b3420b9e882572c950353ba169a9 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 244 4.2E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_11190 8d9609ce339bc5e8f71428a0bd19b329 144 SUPERFAMILY SSF49764 6 137 1.92E-23 T 14-10-2018 IPR008978 HSP20-like chaperone BJD94_11190 8d9609ce339bc5e8f71428a0bd19b329 144 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.2E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BJD94_11190 8d9609ce339bc5e8f71428a0bd19b329 144 Gene3D G3DSA:2.60.40.790 34 137 2.6E-22 T 14-10-2018 IPR008978 HSP20-like chaperone BJD94_01710 f944e818a3d44d53da241fec121d8671 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 13 126 1.1E-32 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BJD94_01710 f944e818a3d44d53da241fec121d8671 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 331 5.6E-16 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain BJD94_01710 f944e818a3d44d53da241fec121d8671 596 SUPERFAMILY SSF53850 124 594 1.99E-57 T 14-10-2018 BJD94_01710 f944e818a3d44d53da241fec121d8671 596 Gene3D G3DSA:3.40.190.10 128 358 2.0E-26 T 14-10-2018 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 Gene3D G3DSA:3.40.50.300 8 274 1.4E-58 T 14-10-2018 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 Gene3D G3DSA:3.40.50.300 276 539 1.3E-54 T 14-10-2018 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 SMART SM00382 337 503 5.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 SMART SM00382 26 223 3.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 Pfam PF12848 ABC transporter 217 295 1.4E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 Pfam PF00005 ABC transporter 328 459 4.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 SUPERFAMILY SSF52540 2 258 7.03E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 Pfam PF00005 ABC transporter 17 178 2.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_12530 d2cef82148928d3e2d73407fc3b02826 640 SUPERFAMILY SSF52540 279 494 2.04E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_18975 f62f9d22021ffbc450dd09df193de154 281 SMART SM00849 35 216 1.4E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_18975 f62f9d22021ffbc450dd09df193de154 281 SUPERFAMILY SSF56281 22 236 1.15E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_18975 f62f9d22021ffbc450dd09df193de154 281 Gene3D G3DSA:3.60.15.10 20 251 5.7E-22 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD94_18975 f62f9d22021ffbc450dd09df193de154 281 Pfam PF00753 Metallo-beta-lactamase superfamily 34 216 1.8E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase BJD94_03200 e5a7f77e1106e0ab9719afd0a5d4e068 131 Pfam PF11948 Protein of unknown function (DUF3465) 11 131 3.5E-60 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 BJD94_15240 814c93333308f28ce9edfe7b8b35fea0 110 Gene3D G3DSA:3.30.1360.20 15 110 1.7E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD94_15240 814c93333308f28ce9edfe7b8b35fea0 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.734 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD94_15240 814c93333308f28ce9edfe7b8b35fea0 110 SUPERFAMILY SSF55248 16 109 4.58E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD94_15240 814c93333308f28ce9edfe7b8b35fea0 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 108 2.2E-32 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF53067 86 393 7.69E-55 T 14-10-2018 BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 91 387 2.9E-111 T 14-10-2018 BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:1.10.10.10 2 81 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 Pfam PF00480 ROK family 88 390 2.1E-70 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF46785 10 76 3.45E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_05645 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 208 377 2.9E-111 T 14-10-2018 BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 SUPERFAMILY SSF52317 254 447 1.48E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 481 2.9E-153 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 6.1E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 195.572 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 Gene3D G3DSA:3.40.50.300 4 246 7.2E-55 T 14-10-2018 BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 1.1E-57 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 SUPERFAMILY SSF52540 7 241 2.13E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21630 83affa67532e71963a9ba9590ed7ccce 483 Gene3D G3DSA:3.40.50.880 267 451 5.4E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_00950 87af584844fbfada2b104c242f9f2a14 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 9.5E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BJD94_11950 212ab150c3477692c596cc114ac218df 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 5.4E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF48300 4 58 1.83E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 2.2E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 93 2.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF54736 51 122 1.62E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD94_11950 212ab150c3477692c596cc114ac218df 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.725 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.3E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_11950 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:1.20.5.710 2 51 6.9E-23 T 14-10-2018 BJD94_11950 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:3.30.1390.10 52 122 3.3E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD94_17150 b045cdc72bd8523d9533bfb47fd10b02 150 SUPERFAMILY SSF53146 2 117 1.96E-19 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily BJD94_17150 b045cdc72bd8523d9533bfb47fd10b02 150 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 99 5.5E-14 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis BJD94_17150 b045cdc72bd8523d9533bfb47fd10b02 150 Gene3D G3DSA:3.30.420.130 1 108 4.3E-13 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily BJD94_18945 162ba0a7371f6ec94f9b998835589a2c 366 Pfam PF13265 Protein of unknown function (DUF4056) 22 285 1.1E-120 T 14-10-2018 IPR025130 Protein of unknown function DUF4056 BJD94_19565 efe7f975f530cf9970c974663d1ca8ab 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.6E-111 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BJD94_19565 efe7f975f530cf9970c974663d1ca8ab 236 Gene3D G3DSA:3.40.50.1580 1 236 5.3E-76 T 14-10-2018 BJD94_19565 efe7f975f530cf9970c974663d1ca8ab 236 SUPERFAMILY SSF53167 3 234 2.88E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_19565 efe7f975f530cf9970c974663d1ca8ab 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.441 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BJD94_19565 efe7f975f530cf9970c974663d1ca8ab 236 Pfam PF01048 Phosphorylase superfamily 17 217 1.5E-34 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_17300 164a62e50d575b2255e42bf424909615 110 SUPERFAMILY SSF51182 6 109 1.21E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_17300 164a62e50d575b2255e42bf424909615 110 Gene3D G3DSA:2.60.120.10 20 110 4.5E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_17300 164a62e50d575b2255e42bf424909615 110 Pfam PF07883 Cupin domain 51 108 2.0E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BJD94_10365 574855493bd1c059a3d3817fe55177f6 228 SUPERFAMILY SSF75217 4 177 1.7E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD94_10365 574855493bd1c059a3d3817fe55177f6 228 Gene3D G3DSA:3.40.1280.10 1 190 4.2E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD94_10365 574855493bd1c059a3d3817fe55177f6 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.186 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 BJD94_10365 574855493bd1c059a3d3817fe55177f6 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.0E-23 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 BJD94_10365 574855493bd1c059a3d3817fe55177f6 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 3.6E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD94_15505 3d027c2b08f28224449592796528b4cd 206 Gene3D G3DSA:1.10.10.10 4 108 8.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_15505 3d027c2b08f28224449592796528b4cd 206 SUPERFAMILY SSF46894 4 108 5.95E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_15505 3d027c2b08f28224449592796528b4cd 206 SMART SM00862 34 107 3.3E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_15505 3d027c2b08f28224449592796528b4cd 206 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 107 1.1E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 Gene3D G3DSA:1.25.40.10 17 288 8.3E-80 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 Pfam PF13176 Tetratricopeptide repeat 232 255 0.028 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 SMART SM00028 229 262 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 SMART SM00028 58 91 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 SMART SM00028 92 125 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 SUPERFAMILY SSF48452 26 278 5.69E-69 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14370 b543d6fc3aa2184969c1902b462592d6 294 PIRSF PIRSF004654 1 287 7.1E-87 T 14-10-2018 IPR023605 Lipoprotein NlpI BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 SUPERFAMILY SSF54913 1 112 2.22E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 52 75 5.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 23 41 5.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 83 103 5.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 PRINTS PR00340 P-II protein signature 2 17 5.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 PIRSF PIRSF039144 1 112 2.7E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 SMART SM00938 4 105 8.5E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD94_00330 27a1fc9fb352c40e15ac50e6e66361fb 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_14580 adcb6bbd427a0a100f3168b1404e5337 314 Gene3D G3DSA:1.20.81.30 157 279 1.1E-5 T 14-10-2018 BJD94_14580 adcb6bbd427a0a100f3168b1404e5337 314 Pfam PF00482 Type II secretion system (T2SS), protein F 174 302 5.5E-23 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_14425 9b00f0956c570226327695a8f87edf0c 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 333 3.1E-40 T 14-10-2018 IPR000160 GGDEF domain BJD94_14425 9b00f0956c570226327695a8f87edf0c 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 4.5E-37 T 14-10-2018 IPR000160 GGDEF domain BJD94_14425 9b00f0956c570226327695a8f87edf0c 362 SUPERFAMILY SSF55073 182 333 1.65E-39 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_14425 9b00f0956c570226327695a8f87edf0c 362 SMART SM00267 166 333 2.6E-48 T 14-10-2018 IPR000160 GGDEF domain BJD94_14425 9b00f0956c570226327695a8f87edf0c 362 Gene3D G3DSA:3.30.70.270 166 334 2.7E-46 T 14-10-2018 BJD94_18620 4d666f1b172933d753a641461a360a9d 305 Gene3D G3DSA:3.40.50.1820 127 259 1.1E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_18620 4d666f1b172933d753a641461a360a9d 305 SUPERFAMILY SSF53474 126 277 2.54E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_12470 5a7b1f31c40d4d0e84cdc90dcb49cac9 363 SUPERFAMILY SSF56935 39 351 1.37E-15 T 14-10-2018 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 Pfam PF00480 ROK family 2 300 3.2E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 Gene3D G3DSA:3.30.420.40 4 297 4.3E-103 T 14-10-2018 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.673 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 SUPERFAMILY SSF53067 1 299 7.21E-57 T 14-10-2018 BJD94_03800 63182546e87487cb3bc7d9bf2b729d54 303 Gene3D G3DSA:3.30.420.40 119 290 4.3E-103 T 14-10-2018 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 2.9E-99 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 PIRSF PIRSF001359 1 284 3.7E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 Gene3D G3DSA:3.20.20.70 1 284 4.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 2.4E-149 T 14-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 SUPERFAMILY SSF51569 3 283 5.86E-101 T 14-10-2018 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.5E-101 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_17485 5731f1aec195a297d2c5adcc4414744f 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BJD94_13450 854db0910d58c46c379d10b6300470b7 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.331 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BJD94_13450 854db0910d58c46c379d10b6300470b7 306 Gene3D G3DSA:3.40.710.10 1 306 1.9E-109 T 14-10-2018 BJD94_13450 854db0910d58c46c379d10b6300470b7 306 Pfam PF04960 Glutaminase 22 306 5.6E-112 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BJD94_13450 854db0910d58c46c379d10b6300470b7 306 SUPERFAMILY SSF56601 3 306 9.72E-115 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD94_13450 854db0910d58c46c379d10b6300470b7 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.7E-129 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BJD94_11485 8c6f0528879144cee1738f521e230ea4 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.1E-118 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BJD94_11485 8c6f0528879144cee1738f521e230ea4 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.501 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BJD94_11485 8c6f0528879144cee1738f521e230ea4 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD94_11485 8c6f0528879144cee1738f521e230ea4 279 Gene3D G3DSA:3.40.50.150 1 279 5.3E-116 T 14-10-2018 BJD94_11485 8c6f0528879144cee1738f521e230ea4 279 SUPERFAMILY SSF53335 9 275 3.23E-97 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 Gene3D G3DSA:1.10.10.10 1 76 9.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 Gene3D G3DSA:3.40.50.10490 97 278 1.3E-39 T 14-10-2018 BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 SUPERFAMILY SSF53697 99 275 5.37E-39 T 14-10-2018 BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 SUPERFAMILY SSF46689 2 77 1.61E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 Pfam PF01380 SIS domain 129 257 1.8E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_17835 5e33ded86d01e6a05ac2104041fd578c 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 2.8E-20 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BJD94_12590 fc17d746d2be57e3b19b303ac61dacaa 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 4.5E-22 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BJD94_12590 fc17d746d2be57e3b19b303ac61dacaa 91 Pfam PF04077 DsrH like protein 8 85 1.1E-18 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BJD94_12590 fc17d746d2be57e3b19b303ac61dacaa 91 SUPERFAMILY SSF75169 1 90 1.18E-19 T 14-10-2018 IPR027396 DsrEFH-like BJD94_12590 fc17d746d2be57e3b19b303ac61dacaa 91 Gene3D G3DSA:3.40.1260.10 1 90 8.5E-22 T 14-10-2018 IPR027396 DsrEFH-like BJD94_10275 69566e302eb87da3861d5f3f1666c7f7 334 SUPERFAMILY SSF103642 3 23 6.54E-8 T 14-10-2018 BJD94_10275 69566e302eb87da3861d5f3f1666c7f7 334 Gene3D G3DSA:3.10.450.50 1 23 3.2E-6 T 14-10-2018 BJD94_10275 69566e302eb87da3861d5f3f1666c7f7 334 Pfam PF02810 SEC-C motif 5 22 3.6E-9 T 14-10-2018 IPR004027 SEC-C motif BJD94_18960 a6afe3298007c55b403ddeb494763674 201 SUPERFAMILY SSF46689 6 78 1.65E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_18960 a6afe3298007c55b403ddeb494763674 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_18960 a6afe3298007c55b403ddeb494763674 201 Gene3D G3DSA:1.10.357.10 60 200 1.0E-26 T 14-10-2018 BJD94_18960 a6afe3298007c55b403ddeb494763674 201 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 198 5.5E-11 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD94_18960 a6afe3298007c55b403ddeb494763674 201 SUPERFAMILY SSF48498 84 199 1.48E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_18960 a6afe3298007c55b403ddeb494763674 201 Gene3D G3DSA:1.10.10.60 1 57 5.2E-18 T 14-10-2018 BJD94_18960 a6afe3298007c55b403ddeb494763674 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_18960 a6afe3298007c55b403ddeb494763674 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_17235 46fd74c598eee1defa655cf41e3ebc67 217 Gene3D G3DSA:3.40.109.10 2 217 1.1E-58 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_17235 46fd74c598eee1defa655cf41e3ebc67 217 Pfam PF00881 Nitroreductase family 8 193 1.3E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD94_17235 46fd74c598eee1defa655cf41e3ebc67 217 SUPERFAMILY SSF55469 1 216 1.24E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_13115 86d3aeedfd6dcf51dcb5109e464566a5 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 1.8E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13115 86d3aeedfd6dcf51dcb5109e464566a5 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13115 86d3aeedfd6dcf51dcb5109e464566a5 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_04290 6df04533d97df19fee0c4a7212d9bbea 130 SUPERFAMILY SSF52540 5 130 3.06E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04290 6df04533d97df19fee0c4a7212d9bbea 130 Gene3D G3DSA:3.40.50.300 5 130 4.9E-30 T 14-10-2018 BJD94_04290 6df04533d97df19fee0c4a7212d9bbea 130 Pfam PF13671 AAA domain 7 107 1.1E-19 T 14-10-2018 BJD94_06255 bded4ef2f35d6fe32ecf0bdc7af94930 444 SUPERFAMILY SSF47226 330 437 3.27E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_06255 bded4ef2f35d6fe32ecf0bdc7af94930 444 Pfam PF01627 Hpt domain 351 427 1.8E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD94_06255 bded4ef2f35d6fe32ecf0bdc7af94930 444 Gene3D G3DSA:1.20.120.160 328 439 9.5E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 SUPERFAMILY SSF102114 4 386 4.05E-111 T 14-10-2018 BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 Pfam PF04055 Radical SAM superfamily 11 181 3.4E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 Pfam PF06969 HemN C-terminal domain 314 374 2.0E-7 T 14-10-2018 IPR010723 HemN, C-terminal BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 SMART SM00729 6 227 7.6E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 Gene3D G3DSA:3.80.30.20 2 305 1.5E-96 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD94_13455 3bacf3390a1230f9ee72ce97b5fa238b 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.4E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BJD94_18210 d6e7292d16ca54218b60841164cad251 393 SUPERFAMILY SSF81901 79 283 7.67E-30 T 14-10-2018 BJD94_18210 d6e7292d16ca54218b60841164cad251 393 SMART SM00671 207 242 4.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 SMART SM00671 135 170 0.038 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 SMART SM00671 171 206 0.0043 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 Gene3D G3DSA:1.25.40.10 42 289 3.3E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18210 d6e7292d16ca54218b60841164cad251 393 Pfam PF08238 Sel1 repeat 137 170 4.2 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 Pfam PF08238 Sel1 repeat 209 242 1.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 Pfam PF08238 Sel1 repeat 80 97 0.49 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_18210 d6e7292d16ca54218b60841164cad251 393 Pfam PF08238 Sel1 repeat 172 206 4.7E-4 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 SMART SM00450 5 128 7.6E-15 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 SMART SM00450 152 272 3.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 Gene3D G3DSA:3.40.250.10 157 276 2.1E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 SUPERFAMILY SSF52821 156 275 5.37E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 Gene3D G3DSA:3.40.250.10 1 141 9.7E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 Pfam PF00581 Rhodanese-like domain 160 268 2.7E-10 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 Pfam PF00581 Rhodanese-like domain 6 124 5.8E-15 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_15675 22c4d0d6be5c1d04c1b72210be7814d4 276 SUPERFAMILY SSF52821 2 134 2.36E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 Pfam PF00578 AhpC/TSA family 38 144 1.6E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 Gene3D G3DSA:3.40.30.10 28 154 5.6E-24 T 14-10-2018 BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 69 78 2.0E-5 T 14-10-2018 BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 128 139 2.0E-5 T 14-10-2018 BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 61 69 2.0E-5 T 14-10-2018 BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 SUPERFAMILY SSF52833 6 152 1.02E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_15820 40dcd8c3a2c3c714c12f2cdf20541d79 163 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD94_03375 d9e96bffe32d5a3133681e940f8a3a81 157 Pfam PF00583 Acetyltransferase (GNAT) family 47 139 6.7E-12 T 14-10-2018 IPR000182 GNAT domain BJD94_03375 d9e96bffe32d5a3133681e940f8a3a81 157 SUPERFAMILY SSF55729 11 145 7.3E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03375 d9e96bffe32d5a3133681e940f8a3a81 157 Gene3D G3DSA:3.40.630.30 14 153 6.8E-19 T 14-10-2018 BJD94_03555 d9e96bffe32d5a3133681e940f8a3a81 157 Pfam PF00583 Acetyltransferase (GNAT) family 47 139 6.7E-12 T 14-10-2018 IPR000182 GNAT domain BJD94_03555 d9e96bffe32d5a3133681e940f8a3a81 157 SUPERFAMILY SSF55729 11 145 7.3E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03555 d9e96bffe32d5a3133681e940f8a3a81 157 Gene3D G3DSA:3.40.630.30 14 153 6.8E-19 T 14-10-2018 BJD94_01545 0daca497d9ed7ef673df15cb7274c5c7 346 SUPERFAMILY SSF81324 3 132 2.09E-19 T 14-10-2018 BJD94_01545 0daca497d9ed7ef673df15cb7274c5c7 346 Gene3D G3DSA:3.40.50.720 112 233 1.3E-11 T 14-10-2018 BJD94_01545 0daca497d9ed7ef673df15cb7274c5c7 346 SUPERFAMILY SSF51735 121 240 3.64E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_01545 0daca497d9ed7ef673df15cb7274c5c7 346 Pfam PF07885 Ion channel 26 103 7.0E-14 T 14-10-2018 IPR013099 Potassium channel domain BJD94_01545 0daca497d9ed7ef673df15cb7274c5c7 346 Gene3D G3DSA:1.10.287.70 19 104 7.6E-14 T 14-10-2018 BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 SMART SM00490 261 344 1.5E-11 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 Gene3D G3DSA:3.40.50.300 1 164 2.7E-29 T 14-10-2018 BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 SUPERFAMILY SSF57829 424 465 2.2E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 1.8E-23 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 SUPERFAMILY SSF52540 48 360 4.45E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 Gene3D G3DSA:3.40.50.300 209 367 8.3E-33 T 14-10-2018 BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 SMART SM00487 1 177 2.0E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD94_05035 7fc1f32abc3975c3bd8ecf35875bdb25 580 Pfam PF00271 Helicase conserved C-terminal domain 239 342 7.9E-14 T 14-10-2018 IPR001650 Helicase, C-terminal BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 5.1E-85 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 Pfam PF01578 Cytochrome C assembly protein 16 184 1.1E-31 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_00730 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 SUPERFAMILY SSF56784 11 199 1.02E-34 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 6.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 1.0E-18 T 14-10-2018 BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 2.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 Gene3D G3DSA:1.10.260.80 24 75 4.8E-55 T 14-10-2018 BJD94_20350 57ef2e85039eefcd110f0aa521f244e6 203 Gene3D G3DSA:3.40.50.1000 12 187 4.8E-55 T 14-10-2018 IPR023214 HAD superfamily BJD94_11470 931eb4460e376965218e734c469a5fe5 238 Gene3D G3DSA:2.70.70.10 116 166 5.3E-8 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_11470 931eb4460e376965218e734c469a5fe5 238 SUPERFAMILY SSF51261 111 202 3.61E-10 T 14-10-2018 IPR011055 Duplicated hybrid motif BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 SUPERFAMILY SSF55073 492 632 1.1E-15 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Gene3D G3DSA:3.30.70.270 487 659 3.4E-17 T 14-10-2018 BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 SUPERFAMILY SSF55785 354 472 1.08E-11 T 14-10-2018 IPR035965 PAS domain superfamily BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 SUPERFAMILY SSF141868 659 908 6.93E-81 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 617 5.0E-13 T 14-10-2018 IPR000160 GGDEF domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 480 7.3E-10 T 14-10-2018 IPR000014 PAS domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Pfam PF00563 EAL domain 659 898 1.8E-69 T 14-10-2018 IPR001633 EAL domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 SMART SM00052 653 903 3.3E-96 T 14-10-2018 IPR001633 EAL domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 SMART SM00267 475 639 8.6E-8 T 14-10-2018 IPR000160 GGDEF domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 597 4.4E-10 T 14-10-2018 IPR000160 GGDEF domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Gene3D G3DSA:3.30.450.20 362 477 7.4E-14 T 14-10-2018 BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Pfam PF13426 PAS domain 374 474 1.6E-10 T 14-10-2018 IPR000014 PAS domain BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Pfam PF05228 CHASE4 domain 60 216 3.8E-27 T 14-10-2018 IPR007892 CHASE4 BJD94_02095 c619575175f4dfbd488696112a99cd2c 911 Gene3D G3DSA:3.20.20.450 660 911 1.3E-85 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_06150 882582b82b508ed2ca025315f07abdb3 355 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 355 26.992 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 BJD94_06150 882582b82b508ed2ca025315f07abdb3 355 Pfam PF03116 NQR2, RnfD, RnfE family 6 354 9.3E-105 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 BJD94_06150 882582b82b508ed2ca025315f07abdb3 355 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 355 9.8E-138 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 BJD94_13310 d59fd20c5cf775c30490fc4a5f21c946 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 37.817 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 BJD94_13310 d59fd20c5cf775c30490fc4a5f21c946 252 Pfam PF04794 YdjC-like protein 2 231 1.5E-51 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like BJD94_13310 d59fd20c5cf775c30490fc4a5f21c946 252 Gene3D G3DSA:3.20.20.370 1 244 2.7E-71 T 14-10-2018 BJD94_13310 d59fd20c5cf775c30490fc4a5f21c946 252 SUPERFAMILY SSF88713 1 243 2.0E-67 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 5.2E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.226 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 SUPERFAMILY SSF89919 2 105 1.31E-31 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Gene3D G3DSA:3.30.300.20 1 106 8.8E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 3.0E-47 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD94_14330 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Pfam PF02033 Ribosome-binding factor A 7 110 4.0E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD94_01240 322f74eaf8c2522ddaff5c8a30572783 246 Gene3D G3DSA:1.10.3720.10 3 243 3.8E-48 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_01240 322f74eaf8c2522ddaff5c8a30572783 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 6.9E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_01240 322f74eaf8c2522ddaff5c8a30572783 246 SUPERFAMILY SSF161098 11 227 8.76E-39 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_01240 322f74eaf8c2522ddaff5c8a30572783 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 1.7E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BJD94_01445 1a29d65b189adbe4b69045dbcc675fba 248 Pfam PF05618 Putative ATP-dependant zinc protease 108 243 1.9E-47 T 14-10-2018 BJD94_01445 1a29d65b189adbe4b69045dbcc675fba 248 SUPERFAMILY SSF50630 108 242 2.33E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_01445 1a29d65b189adbe4b69045dbcc675fba 248 Gene3D G3DSA:2.40.70.10 105 235 1.5E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 4.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 Pfam PF03466 LysR substrate binding domain 91 287 7.5E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 Gene3D G3DSA:1.10.10.10 2 83 5.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 Gene3D G3DSA:3.40.190.10 84 179 5.2E-14 T 14-10-2018 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 SUPERFAMILY SSF53850 93 291 6.83E-27 T 14-10-2018 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 Gene3D G3DSA:3.40.190.10 180 255 9.0E-7 T 14-10-2018 BJD94_16320 91ec73602b6d5475f0198d63bea04998 294 SUPERFAMILY SSF46785 4 112 4.68E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_09665 a1abf426f818549e4c7e196edd6a8106 229 Pfam PF10986 Protein of unknown function (DUF2796) 137 224 7.5E-20 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 BJD94_09665 a1abf426f818549e4c7e196edd6a8106 229 Pfam PF10986 Protein of unknown function (DUF2796) 29 143 2.4E-30 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 BJD94_06830 12485ec919cfe3ba3613b91fb78e4750 323 Gene3D G3DSA:1.10.530.10 66 318 1.9E-91 T 14-10-2018 BJD94_06830 12485ec919cfe3ba3613b91fb78e4750 323 Gene3D G3DSA:1.10.8.350 34 199 1.9E-91 T 14-10-2018 BJD94_06830 12485ec919cfe3ba3613b91fb78e4750 323 SUPERFAMILY SSF53955 12 322 5.48E-100 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_06830 12485ec919cfe3ba3613b91fb78e4750 323 Pfam PF13406 Transglycosylase SLT domain 23 319 1.5E-110 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 BJD94_06830 12485ec919cfe3ba3613b91fb78e4750 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 1.6E-113 T 14-10-2018 IPR011970 Lytic murein transglycosylase BJD94_20755 bbaed276938f14c0513a31c7d5151cb9 316 SUPERFAMILY SSF81345 7 313 1.57E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_20755 bbaed276938f14c0513a31c7d5151cb9 316 Pfam PF01032 FecCD transport family 27 312 1.2E-54 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_20755 bbaed276938f14c0513a31c7d5151cb9 316 Gene3D G3DSA:1.10.3470.10 5 315 1.2E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_04575 dd118dbae4683c46421591788e4dea9b 801 SUPERFAMILY SSF49452 711 767 1.8E-5 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD94_04575 dd118dbae4683c46421591788e4dea9b 801 Pfam PF00577 Outer membrane usher protein 257 607 9.0E-6 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BJD94_13495 9267ae914adf40c07e14b1d7d9318a3e 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 7.5E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BJD94_13495 9267ae914adf40c07e14b1d7d9318a3e 368 Pfam PF00437 Type II/IV secretion system protein 103 267 1.4E-36 T 14-10-2018 IPR001482 Type II/IV secretion system protein BJD94_13495 9267ae914adf40c07e14b1d7d9318a3e 368 Gene3D G3DSA:3.30.450.90 1 97 4.4E-23 T 14-10-2018 BJD94_13495 9267ae914adf40c07e14b1d7d9318a3e 368 SUPERFAMILY SSF52540 3 334 4.0E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_13495 9267ae914adf40c07e14b1d7d9318a3e 368 Gene3D G3DSA:3.40.50.300 99 355 5.2E-88 T 14-10-2018 BJD94_02470 58cfc763875adfebd23cf40ff34ef976 1288 SUPERFAMILY SSF55486 276 646 8.71E-16 T 14-10-2018 BJD94_02470 58cfc763875adfebd23cf40ff34ef976 1288 Pfam PF16313 Met-zincin 565 785 8.4E-6 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 BJD94_02470 58cfc763875adfebd23cf40ff34ef976 1288 Gene3D G3DSA:3.40.390.10 459 641 3.2E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 SUPERFAMILY SSF82866 402 598 4.32E-45 T 14-10-2018 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 6.9E-29 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 2.4E-151 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Gene3D G3DSA:3.30.70.3400 211 429 1.8E-50 T 14-10-2018 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 607 46.302 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Gene3D G3DSA:3.30.1360.200 270 423 1.8E-50 T 14-10-2018 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Pfam PF02355 Protein export membrane protein 425 586 5.1E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Gene3D G3DSA:1.20.1640.10 440 592 7.6E-8 T 14-10-2018 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 1.3E-82 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 Pfam PF07549 SecD/SecF GG Motif 104 130 3.5E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 3.5E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 3.5E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_08270 374b19d3bc2214ea5796ba99bf4a7c20 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 3.5E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD94_04815 8c92b92e6c66d59ba593b89b2ec88f21 232 Pfam PF08732 HIM1 80 168 3.4E-10 T 14-10-2018 IPR014843 Protein Him1/Fmp52 BJD94_04815 8c92b92e6c66d59ba593b89b2ec88f21 232 Gene3D G3DSA:3.40.50.720 2 231 1.9E-52 T 14-10-2018 BJD94_04815 8c92b92e6c66d59ba593b89b2ec88f21 232 SUPERFAMILY SSF51735 6 227 1.06E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_10010 43663d7d65b41078513c26390e70b2c1 123 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 111 3.6E-35 T 14-10-2018 IPR012657 23S rRNA-intervening sequence protein BJD94_10010 43663d7d65b41078513c26390e70b2c1 123 Pfam PF05635 23S rRNA-intervening sequence protein 4 105 1.6E-34 T 14-10-2018 IPR012657 23S rRNA-intervening sequence protein BJD94_10010 43663d7d65b41078513c26390e70b2c1 123 SUPERFAMILY SSF158446 1 112 2.09E-36 T 14-10-2018 IPR036583 23S rRNA-intervening sequence superfamily BJD94_10010 43663d7d65b41078513c26390e70b2c1 123 Gene3D G3DSA:1.20.1440.60 1 116 5.7E-36 T 14-10-2018 IPR036583 23S rRNA-intervening sequence superfamily BJD94_17320 ed37dc5a9082b52163fea0853fcdd7e6 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 110 7.8E-25 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 BJD94_17320 ed37dc5a9082b52163fea0853fcdd7e6 115 PIRSF PIRSF028299 1 114 8.8E-43 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 Pfam PF05231 MASE1 15 276 8.7E-19 T 14-10-2018 IPR007895 MASE1 BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 Pfam PF07730 Histidine kinase 304 367 3.3E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 SMART SM00387 407 499 3.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 Gene3D G3DSA:3.30.565.10 371 498 1.8E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 SUPERFAMILY SSF55874 372 497 2.36E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD94_15525 846f939e794f52f83605739a8e66b4bf 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 468 1.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD94_06870 d1675cb5a1aa369e12a2803588d1fb81 184 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.2E-47 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD94_06870 d1675cb5a1aa369e12a2803588d1fb81 184 PIRSF PIRSF004982 2 184 1.2E-60 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD94_06870 d1675cb5a1aa369e12a2803588d1fb81 184 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 154 8.8E-39 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD94_19265 778bb78c6ae73d5430e07a5e05b5ae6c 106 SUPERFAMILY SSF117782 1 106 3.4E-39 T 14-10-2018 IPR035439 UPF0145 domain superfamily BJD94_19265 778bb78c6ae73d5430e07a5e05b5ae6c 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.373 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_19265 778bb78c6ae73d5430e07a5e05b5ae6c 106 Gene3D G3DSA:3.30.110.70 2 106 5.0E-43 T 14-10-2018 BJD94_19265 778bb78c6ae73d5430e07a5e05b5ae6c 106 Pfam PF01906 Putative heavy-metal-binding 1 105 8.5E-41 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 Pfam PF02567 Phenazine biosynthesis-like protein 10 264 8.3E-63 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 Gene3D G3DSA:3.10.310.10 118 256 2.2E-85 T 14-10-2018 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 227 3.5E-38 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 PIRSF PIRSF016184 3 268 1.6E-51 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 SUPERFAMILY SSF54506 4 268 6.96E-67 T 14-10-2018 BJD94_16810 dea7bee41d023d7ffda6c33fcb505df1 268 Gene3D G3DSA:3.10.310.10 8 264 2.2E-85 T 14-10-2018 BJD94_15135 a9a1410d4f38c9d05bcb7835dca4b284 157 SUPERFAMILY SSF160719 33 142 4.32E-9 T 14-10-2018 BJD94_15135 a9a1410d4f38c9d05bcb7835dca4b284 157 Pfam PF04965 Gene 25-like lysozyme 33 133 2.0E-16 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BJD94_15135 a9a1410d4f38c9d05bcb7835dca4b284 157 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 8 147 3.5E-34 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 Gene3D G3DSA:3.40.50.620 2 317 2.9E-133 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.318 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 Gene3D G3DSA:1.10.10.350 370 472 5.3E-25 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 SUPERFAMILY SSF48163 302 464 2.49E-48 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 SUPERFAMILY SSF52374 3 301 4.83E-108 T 14-10-2018 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.3E-196 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD94_07360 42c262720f2c1a5e2c5b60c719a9c36f 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 3.4E-114 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD94_00755 6465d03ad9320729cbad837ab0404afb 160 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.5E-55 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BJD94_00755 6465d03ad9320729cbad837ab0404afb 160 Gene3D G3DSA:1.10.8.640 20 106 6.0E-37 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BJD94_05095 9e48b161b23e61c4b8b03c88a66c6660 381 Gene3D G3DSA:3.40.190.10 69 329 1.4E-17 T 14-10-2018 BJD94_05095 9e48b161b23e61c4b8b03c88a66c6660 381 Pfam PF13416 Bacterial extracellular solute-binding protein 59 331 8.6E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_05095 9e48b161b23e61c4b8b03c88a66c6660 381 PIRSF PIRSF029172 1 381 6.4E-171 T 14-10-2018 IPR027020 Protein ynjB BJD94_05095 9e48b161b23e61c4b8b03c88a66c6660 381 Gene3D G3DSA:3.40.190.10 153 297 1.4E-17 T 14-10-2018 BJD94_05095 9e48b161b23e61c4b8b03c88a66c6660 381 SUPERFAMILY SSF53850 33 379 7.06E-40 T 14-10-2018 BJD94_19220 8cc81dd316e40337fe3552deb4dabec4 399 Gene3D G3DSA:1.20.1250.20 206 396 2.2E-18 T 14-10-2018 BJD94_19220 8cc81dd316e40337fe3552deb4dabec4 399 Gene3D G3DSA:1.20.1250.20 1 188 2.6E-14 T 14-10-2018 BJD94_19220 8cc81dd316e40337fe3552deb4dabec4 399 SUPERFAMILY SSF103473 5 385 2.62E-43 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_19220 8cc81dd316e40337fe3552deb4dabec4 399 Pfam PF07690 Major Facilitator Superfamily 11 350 1.2E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_15165 fcc8e30b0f18d275a76b9fc3278a24b2 290 Gene3D G3DSA:3.60.40.10 22 267 5.5E-59 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_15165 fcc8e30b0f18d275a76b9fc3278a24b2 290 SMART SM00331 37 263 5.1E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_15165 fcc8e30b0f18d275a76b9fc3278a24b2 290 SUPERFAMILY SSF81606 34 263 1.01E-59 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_15165 fcc8e30b0f18d275a76b9fc3278a24b2 290 Pfam PF13672 Protein phosphatase 2C 46 232 4.1E-16 T 14-10-2018 BJD94_15165 fcc8e30b0f18d275a76b9fc3278a24b2 290 SMART SM00332 23 261 5.8E-16 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 569 1.4E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Gene3D G3DSA:3.90.700.10 227 331 4.3E-162 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 SUPERFAMILY SSF51905 2 421 8.79E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 1 569 2.5E-265 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Gene3D G3DSA:4.10.80.40 529 569 2.3E-23 T 14-10-2018 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 24 33 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Gene3D G3DSA:3.50.50.60 1 397 4.3E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Gene3D G3DSA:1.20.58.100 412 528 1.5E-38 T 14-10-2018 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 PIRSF PIRSF000171 1 561 3.3E-43 T 14-10-2018 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 SUPERFAMILY SSF46977 432 569 1.83E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 Pfam PF00890 FAD binding domain 1 386 2.1E-110 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 SUPERFAMILY SSF56425 217 337 2.54E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06975 57235cae9f770fe23ee24220c5c4fa53 569 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 1 569 1.1E-232 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_09820 69f2e278c1a446ed028377629479460a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09820 69f2e278c1a446ed028377629479460a 179 SUPERFAMILY SSF55282 4 179 1.2E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09820 69f2e278c1a446ed028377629479460a 179 Gene3D G3DSA:3.30.1440.10 1 179 5.4E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09820 69f2e278c1a446ed028377629479460a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.728 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_09820 69f2e278c1a446ed028377629479460a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09820 69f2e278c1a446ed028377629479460a 179 Pfam PF00281 Ribosomal protein L5 24 80 8.6E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09820 69f2e278c1a446ed028377629479460a 179 PIRSF PIRSF002161 1 179 1.9E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Gene3D G3DSA:1.10.540.10 63 176 8.3E-91 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 SUPERFAMILY SSF56645 61 296 1.96E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.0E-9 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 3.8E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 SUPERFAMILY SSF47203 301 453 3.54E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Gene3D G3DSA:2.40.110.10 177 300 8.3E-91 T 14-10-2018 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 4.0E-110 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 3.0E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD94_04985 fade73e0d29566d0eaa8548f810a0958 761 Gene3D G3DSA:1.20.140.10 301 446 8.3E-91 T 14-10-2018 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Gene3D G3DSA:1.10.460.10 163 607 1.7E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Gene3D G3DSA:3.40.50.140 2 157 1.1E-61 T 14-10-2018 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 SMART SM00493 2 125 3.1E-27 T 14-10-2018 IPR006171 TOPRIM domain BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 SMART SM00437 284 563 5.0E-87 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 65.263 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Pfam PF01131 DNA topoisomerase 159 597 1.0E-113 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Gene3D G3DSA:2.70.20.10 218 493 1.7E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 639 2.4E-235 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Pfam PF01751 Toprim domain 4 134 1.0E-16 T 14-10-2018 IPR006171 TOPRIM domain BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 SMART SM00436 129 224 6.2E-32 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 SUPERFAMILY SSF56712 3 612 1.57E-185 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 Gene3D G3DSA:1.10.290.10 293 422 1.7E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06315 23d93440f06d991842ee8b87abaac4af 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD94_06395 ce8d208bb50885b5dc17133c029a5032 262 Pfam PF01145 SPFH domain / Band 7 family 5 167 7.0E-18 T 14-10-2018 IPR001107 Band 7 domain BJD94_06395 ce8d208bb50885b5dc17133c029a5032 262 SUPERFAMILY SSF117892 42 159 5.89E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD94_06395 ce8d208bb50885b5dc17133c029a5032 262 TIGRFAM TIGR01933 hflK: HflK protein 5 254 8.6E-70 T 14-10-2018 IPR010201 HflK GO:0016021 BJD94_06395 ce8d208bb50885b5dc17133c029a5032 262 SMART SM00244 6 152 1.2E-7 T 14-10-2018 IPR001107 Band 7 domain BJD94_06395 ce8d208bb50885b5dc17133c029a5032 262 Gene3D G3DSA:3.30.479.30 35 142 2.6E-19 T 14-10-2018 BJD94_08585 cd5d4062b844579c6255111625703f86 382 Pfam PF08014 Domain of unknown function (DUF1704) 44 380 7.5E-114 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 BJD94_08585 cd5d4062b844579c6255111625703f86 382 SMART SM01154 43 382 1.6E-152 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 BJD94_08585 cd5d4062b844579c6255111625703f86 382 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 18 376 1.9E-144 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA BJD94_01690 a455cb051a1af039b63270dd1a3dfb35 211 Gene3D G3DSA:3.40.50.1000 8 205 7.1E-45 T 14-10-2018 IPR023214 HAD superfamily BJD94_01690 a455cb051a1af039b63270dd1a3dfb35 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 185 7.6E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_01690 a455cb051a1af039b63270dd1a3dfb35 211 SUPERFAMILY SSF56784 4 209 5.7E-46 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_01690 a455cb051a1af039b63270dd1a3dfb35 211 Gene3D G3DSA:1.10.150.240 17 86 7.1E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_01690 a455cb051a1af039b63270dd1a3dfb35 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 7.5E-33 T 14-10-2018 BJD94_21425 d5a95842934df3f62128e837f2222328 113 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 1.2E-31 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 BJD94_21425 d5a95842934df3f62128e837f2222328 113 SUPERFAMILY SSF54913 5 107 2.85E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD94_21425 d5a95842934df3f62128e837f2222328 113 Gene3D G3DSA:3.30.70.120 1 109 4.2E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_12550 5af3001a5373deb738f4df1ef0ade305 199 SUPERFAMILY SSF54534 2 140 3.14E-37 T 14-10-2018 BJD94_12550 5af3001a5373deb738f4df1ef0ade305 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.5E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD94_12550 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:3.10.50.40 3 154 1.5E-60 T 14-10-2018 BJD94_12550 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:2.40.10.330 71 121 1.5E-60 T 14-10-2018 BJD94_06090 54e3b774bb54d76d89a5eca8b70ba16f 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06090 54e3b774bb54d76d89a5eca8b70ba16f 159 Pfam PF01967 MoaC family 15 150 1.5E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06090 54e3b774bb54d76d89a5eca8b70ba16f 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.1E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06090 54e3b774bb54d76d89a5eca8b70ba16f 159 Gene3D G3DSA:3.30.70.640 1 159 7.0E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_06090 54e3b774bb54d76d89a5eca8b70ba16f 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.044 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD94_10115 75e52b73a11b6102b04c14d3a9c46191 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 278 3.3E-45 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BJD94_10115 75e52b73a11b6102b04c14d3a9c46191 396 Gene3D G3DSA:3.90.25.40 201 311 1.7E-160 T 14-10-2018 BJD94_10115 75e52b73a11b6102b04c14d3a9c46191 396 Gene3D G3DSA:3.40.50.720 9 370 1.7E-160 T 14-10-2018 BJD94_10115 75e52b73a11b6102b04c14d3a9c46191 396 SUPERFAMILY SSF51735 34 288 4.84E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11630 a0819fc97b5c8b8ca43c196f4afbba65 205 Pfam PF01810 LysE type translocator 15 202 1.9E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_11630 a0819fc97b5c8b8ca43c196f4afbba65 205 PIRSF PIRSF006324 1 205 7.3E-57 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_03300 a375e5e303aecaee63240719cd6d441a 165 Gene3D G3DSA:1.20.120.450 1 157 1.8E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BJD94_03300 a375e5e303aecaee63240719cd6d441a 165 Pfam PF05163 DinB family 4 156 2.8E-14 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB BJD94_03300 a375e5e303aecaee63240719cd6d441a 165 SUPERFAMILY SSF109854 6 153 1.17E-25 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BJD94_17540 0a83eff9ae4a385980eecb0e861df1e8 72 SUPERFAMILY SSF103481 4 65 4.84E-9 T 14-10-2018 BJD94_17540 0a83eff9ae4a385980eecb0e861df1e8 72 Pfam PF00892 EamA-like transporter family 4 60 7.8E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_17685 b30cf5cffbb656c1adff54fca3acfba1 770 SUPERFAMILY SSF52540 3 419 9.96E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17685 b30cf5cffbb656c1adff54fca3acfba1 770 Pfam PF13175 AAA ATPase domain 3 419 5.0E-29 T 14-10-2018 BJD94_17685 b30cf5cffbb656c1adff54fca3acfba1 770 Gene3D G3DSA:3.40.50.300 2 435 1.4E-13 T 14-10-2018 BJD94_04520 5d533b3bdc59d3b140ecc3319ce41d82 159 Gene3D G3DSA:3.40.630.30 5 137 7.3E-33 T 14-10-2018 BJD94_04520 5d533b3bdc59d3b140ecc3319ce41d82 159 Pfam PF00583 Acetyltransferase (GNAT) family 30 146 1.2E-17 T 14-10-2018 IPR000182 GNAT domain BJD94_04520 5d533b3bdc59d3b140ecc3319ce41d82 159 SUPERFAMILY SSF55729 5 149 1.65E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_08445 9531c3ec616594862bd8cb9ec96e9920 478 Pfam PF05598 Transposase domain (DUF772) 52 125 8.6E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal BJD94_08445 9531c3ec616594862bd8cb9ec96e9920 478 Pfam PF13751 Transposase DDE domain 324 442 2.2E-27 T 14-10-2018 IPR025668 Transposase DDE domain BJD94_11615 cc877e3be349d65f36b9723b230dd3c9 156 SUPERFAMILY SSF88697 1 148 1.92E-60 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_11615 cc877e3be349d65f36b9723b230dd3c9 156 Gene3D G3DSA:3.10.590.10 1 153 1.2E-64 T 14-10-2018 BJD94_11615 cc877e3be349d65f36b9723b230dd3c9 156 Pfam PF01878 EVE domain 2 148 2.7E-55 T 14-10-2018 IPR002740 EVE domain BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 SMART SM00304 213 265 7.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 SUPERFAMILY SSF58104 233 542 3.14E-72 T 14-10-2018 BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 Pfam PF00672 HAMP domain 215 261 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 Gene3D G3DSA:1.10.287.950 213 542 2.7E-71 T 14-10-2018 BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 SMART SM00283 280 541 4.0E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_19495 6a0c69f51091c33532b609e3cd16af5a 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 9.0E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_15035 b9957b2a44ce6660d7998d2557918e40 461 Gene3D G3DSA:3.30.2290.10 4 222 5.9E-18 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD94_15035 b9957b2a44ce6660d7998d2557918e40 461 PIRSF PIRSF004919 1 461 1.2E-114 T 14-10-2018 IPR025502 TldD BJD94_15035 b9957b2a44ce6660d7998d2557918e40 461 SUPERFAMILY SSF111283 7 459 4.58E-111 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD94_15035 b9957b2a44ce6660d7998d2557918e40 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 6.7E-62 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD94_05260 edc64ebdff7f267a3822435f9bc25ced 329 SUPERFAMILY SSF56935 44 329 3.46E-20 T 14-10-2018 BJD94_05260 edc64ebdff7f267a3822435f9bc25ced 329 Pfam PF13609 Gram-negative porin 8 313 1.7E-25 T 14-10-2018 BJD94_05260 edc64ebdff7f267a3822435f9bc25ced 329 Gene3D G3DSA:2.40.160.10 41 329 1.1E-16 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_19225 5707ba72d56d174e809bccb0562bf5b6 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 1.5E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BJD94_19225 5707ba72d56d174e809bccb0562bf5b6 160 Gene3D G3DSA:2.40.440.10 12 160 2.2E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD94_19225 5707ba72d56d174e809bccb0562bf5b6 160 SUPERFAMILY SSF141523 24 158 6.15E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD94_04580 efed996fb0cca01153fbc626e384319d 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 142 2.4E-7 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BJD94_04580 efed996fb0cca01153fbc626e384319d 219 SUPERFAMILY SSF49354 34 141 1.07E-11 T 14-10-2018 IPR008962 PapD-like superfamily BJD94_00885 6e3309bc8108ab57b4ce0c69b1836979 163 Pfam PF02674 Colicin V production protein 4 142 6.7E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BJD94_10850 b3d1fdef949d2f6103a74dc1df82663a 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 4.6E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BJD94_10850 b3d1fdef949d2f6103a74dc1df82663a 126 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.1E-29 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BJD94_10850 b3d1fdef949d2f6103a74dc1df82663a 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.007 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BJD94_08955 5bb5a87b71261f41fcd7008530b46831 196 Gene3D G3DSA:3.40.50.10490 1 195 1.3E-72 T 14-10-2018 BJD94_08955 5bb5a87b71261f41fcd7008530b46831 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 14-10-2018 BJD94_08955 5bb5a87b71261f41fcd7008530b46831 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.141 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BJD94_08955 5bb5a87b71261f41fcd7008530b46831 196 Pfam PF13580 SIS domain 9 144 3.8E-35 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_15800 9d9bf03373a2874395d7b0510dd274d3 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 1.3E-27 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BJD94_15800 9d9bf03373a2874395d7b0510dd274d3 204 Gene3D G3DSA:3.90.850.10 7 203 4.0E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD94_15800 9d9bf03373a2874395d7b0510dd274d3 204 SUPERFAMILY SSF56529 9 188 1.7E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD94_02100 9cdbb9426a444223c5c58c2ba173ac84 519 SUPERFAMILY SSF51998 24 468 1.1E-88 T 14-10-2018 BJD94_02100 9cdbb9426a444223c5c58c2ba173ac84 519 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 4.1E-239 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted BJD94_02100 9cdbb9426a444223c5c58c2ba173ac84 519 PIRSF PIRSF028991 5 514 6.7E-286 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted BJD94_02100 9cdbb9426a444223c5c58c2ba173ac84 519 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 5.0E-226 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted BJD94_06685 3eefae1bf066de53cc601ef8cadb159e 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 459 1.6E-154 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 BJD94_06685 3eefae1bf066de53cc601ef8cadb159e 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 476 44.611 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 SUPERFAMILY SSF53850 88 292 2.53E-43 T 14-10-2018 BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 Gene3D G3DSA:3.40.190.290 90 292 4.2E-63 T 14-10-2018 BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 Pfam PF03466 LysR substrate binding domain 88 291 1.9E-41 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 Gene3D G3DSA:1.10.10.10 1 85 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16440 0ded0b17adcfd852a45672476ee5844c 299 SUPERFAMILY SSF46785 1 87 3.16E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 SUPERFAMILY SSF56322 3 501 6.93E-157 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 Pfam PF00425 chorismate binding enzyme 231 491 3.1E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 Gene3D G3DSA:3.60.120.10 1 506 2.2E-185 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 PRINTS PR00095 Anthranilate synthase component I signature 339 352 5.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 PRINTS PR00095 Anthranilate synthase component I signature 433 447 5.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 PRINTS PR00095 Anthranilate synthase component I signature 353 366 5.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 PIRSF PIRSF001373 1 506 5.1E-259 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 183 3.4E-13 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_05990 c982b8384dc35f903246086706bfe2d2 506 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 7 503 8.7E-227 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_10240 bfbe64a7711768ed2af6878b360b1116 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.159 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 BJD94_10240 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF48498 81 191 1.73E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD94_10240 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF46689 5 78 4.03E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_10240 bfbe64a7711768ed2af6878b360b1116 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_10240 bfbe64a7711768ed2af6878b360b1116 196 Gene3D G3DSA:1.10.357.10 3 196 3.4E-77 T 14-10-2018 BJD94_14725 82734345f9bba16eb4774c39c901d871 104 Pfam PF07130 YebG protein 1 72 1.7E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG BJD94_14725 82734345f9bba16eb4774c39c901d871 104 Gene3D G3DSA:1.10.10.710 21 96 6.2E-8 T 14-10-2018 IPR038627 YebG-like superfamily BJD94_07835 af56929e8f868c7031a22642affb9a2e 155 SUPERFAMILY SSF48013 7 153 1.7E-38 T 14-10-2018 IPR035926 NusB-like superfamily BJD94_07835 af56929e8f868c7031a22642affb9a2e 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 1.3E-42 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 BJD94_07835 af56929e8f868c7031a22642affb9a2e 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BJD94_07835 af56929e8f868c7031a22642affb9a2e 155 Gene3D G3DSA:1.10.940.10 3 155 1.2E-47 T 14-10-2018 IPR035926 NusB-like superfamily BJD94_07835 af56929e8f868c7031a22642affb9a2e 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.977 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 BJD94_04365 95740f5c24179562ea4ca2e8e97c0675 395 SUPERFAMILY SSF46894 323 387 9.86E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_04365 95740f5c24179562ea4ca2e8e97c0675 395 SMART SM00421 330 387 5.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_04365 95740f5c24179562ea4ca2e8e97c0675 395 Gene3D G3DSA:1.10.10.10 313 390 6.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_04365 95740f5c24179562ea4ca2e8e97c0675 395 Pfam PF00196 Bacterial regulatory proteins, luxR family 333 384 6.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD94_06910 95be6ff0905009612548cabce629873c 142 Gene3D G3DSA:3.30.428.10 1 142 8.9E-44 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_06910 95be6ff0905009612548cabce629873c 142 Pfam PF01230 HIT domain 11 99 2.6E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein BJD94_06910 95be6ff0905009612548cabce629873c 142 SUPERFAMILY SSF54197 3 133 5.53E-34 T 14-10-2018 IPR036265 HIT-like superfamily BJD94_06910 95be6ff0905009612548cabce629873c 142 PIRSF PIRSF000714 2 140 9.8E-54 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type BJD94_09635 d93e63b6140db2a708c2891bbc87b38b 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 915 1250 9.3E-62 T 14-10-2018 IPR007452 Translocation and assembly module TamB BJD94_08120 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BJD94_08120 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 175 1.0E-35 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BJD94_11740 dd9428b52e67a3c6c93e88b3c319c99b 284 Pfam PF01040 UbiA prenyltransferase family 24 266 4.2E-69 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD94_11740 dd9428b52e67a3c6c93e88b3c319c99b 284 Gene3D G3DSA:1.10.357.140 19 179 9.9E-43 T 14-10-2018 BJD94_11740 dd9428b52e67a3c6c93e88b3c319c99b 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 2.0E-107 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BJD94_11740 dd9428b52e67a3c6c93e88b3c319c99b 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.645 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BJD94_10940 e991cb41f3bc9910fe78687b023baa67 365 Gene3D G3DSA:3.10.350.10 38 85 6.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily BJD94_10940 e991cb41f3bc9910fe78687b023baa67 365 SMART SM00257 39 87 2.0E-4 T 14-10-2018 IPR018392 LysM domain BJD94_10940 e991cb41f3bc9910fe78687b023baa67 365 Pfam PF01476 LysM domain 40 85 7.3E-12 T 14-10-2018 IPR018392 LysM domain BJD94_10940 e991cb41f3bc9910fe78687b023baa67 365 SUPERFAMILY SSF54106 38 86 1.1E-6 T 14-10-2018 BJD94_12535 dc7306ea66ba975cd527348c818a2974 199 Gene3D G3DSA:3.40.50.360 19 191 2.7E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_12535 dc7306ea66ba975cd527348c818a2974 199 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 15 196 47.529 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BJD94_12535 dc7306ea66ba975cd527348c818a2974 199 Pfam PF02525 Flavodoxin-like fold 20 186 1.3E-41 T 14-10-2018 IPR003680 Flavodoxin-like fold BJD94_12535 dc7306ea66ba975cd527348c818a2974 199 SUPERFAMILY SSF52218 19 192 1.11E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 Pfam PF12833 Helix-turn-helix domain 216 290 1.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 Gene3D G3DSA:1.10.10.60 189 292 2.4E-26 T 14-10-2018 BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 SMART SM00342 210 292 1.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 SUPERFAMILY SSF46689 246 290 6.27E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 SUPERFAMILY SSF46689 193 244 4.3E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 9.7E-33 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal BJD94_21245 63375f7c3685a0d0700f63abe8c18e26 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD94_08700 5248d370f39880efb721b39da18930f3 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 1.2E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BJD94_08700 5248d370f39880efb721b39da18930f3 183 Gene3D G3DSA:1.20.120.520 1 152 8.3E-19 T 14-10-2018 BJD94_18890 728098cff36ce11d71fa9414acc16cac 250 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 1.7E-55 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BJD94_18890 728098cff36ce11d71fa9414acc16cac 250 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.6E-57 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BJD94_20795 895194578e9a551d9cc226be1af298e2 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 4.8E-244 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK BJD94_20795 895194578e9a551d9cc226be1af298e2 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 7.1E-114 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BJD94_20795 895194578e9a551d9cc226be1af298e2 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 711 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS BJD94_20795 895194578e9a551d9cc226be1af298e2 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 4.8E-23 T 14-10-2018 BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 164 184 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 Gene3D G3DSA:3.40.50.620 1 257 2.9E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 SMART SM00893 23 220 1.4E-52 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 Pfam PF01012 Electron transfer flavoprotein domain 29 213 4.2E-39 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 PIRSF PIRSF000090 1 258 5.8E-79 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BJD94_15330 a87ad486f8f3fa924e3138e02025c88a 258 SUPERFAMILY SSF52402 2 251 1.88E-73 T 14-10-2018 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Gene3D G3DSA:3.30.1950.10 89 170 1.3E-119 T 14-10-2018 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Gene3D G3DSA:3.10.560.10 60 342 1.3E-119 T 14-10-2018 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Gene3D G3DSA:1.20.5.70 345 378 3.6E-20 T 14-10-2018 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Pfam PF10531 SLBB domain 257 303 6.8E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Pfam PF10531 SLBB domain 174 222 1.6E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Gene3D G3DSA:3.10.560.10 67 255 1.3E-119 T 14-10-2018 BJD94_10015 f7a4773daf4c63c75b0c522dd23afed0 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 2.7E-26 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BJD94_20560 7ac9e50a62ddab3d7509b277e7397484 292 SUPERFAMILY SSF53822 8 292 1.66E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_20560 7ac9e50a62ddab3d7509b277e7397484 292 Gene3D G3DSA:3.40.50.2300 29 277 2.9E-96 T 14-10-2018 BJD94_20560 7ac9e50a62ddab3d7509b277e7397484 292 Gene3D G3DSA:3.40.50.2300 125 259 2.9E-96 T 14-10-2018 BJD94_20560 7ac9e50a62ddab3d7509b277e7397484 292 Pfam PF13407 Periplasmic binding protein domain 28 277 3.5E-60 T 14-10-2018 IPR025997 Periplasmic binding protein BJD94_07840 faeacaab3881840c69707ebb87565b96 156 Gene3D G3DSA:3.40.50.960 1 156 1.6E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07840 faeacaab3881840c69707ebb87565b96 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.189 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07840 faeacaab3881840c69707ebb87565b96 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 8.9E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07840 faeacaab3881840c69707ebb87565b96 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.5E-54 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_07840 faeacaab3881840c69707ebb87565b96 156 SUPERFAMILY SSF52121 4 154 1.03E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD94_02860 f56b825fa3b43471e77b8e93f6f33050 120 SUPERFAMILY SSF54593 3 119 1.55E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02860 f56b825fa3b43471e77b8e93f6f33050 120 PIRSF PIRSF039020 1 120 1.9E-34 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR BJD94_02860 f56b825fa3b43471e77b8e93f6f33050 120 Gene3D G3DSA:3.10.180.10 1 120 4.7E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02860 f56b825fa3b43471e77b8e93f6f33050 120 Pfam PF12681 Glyoxalase-like domain 6 117 7.2E-8 T 14-10-2018 IPR025870 Glyoxalase-like domain BJD94_02945 f56b825fa3b43471e77b8e93f6f33050 120 SUPERFAMILY SSF54593 3 119 1.55E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02945 f56b825fa3b43471e77b8e93f6f33050 120 PIRSF PIRSF039020 1 120 1.9E-34 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR BJD94_02945 f56b825fa3b43471e77b8e93f6f33050 120 Gene3D G3DSA:3.10.180.10 1 120 4.7E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02945 f56b825fa3b43471e77b8e93f6f33050 120 Pfam PF12681 Glyoxalase-like domain 6 117 7.2E-8 T 14-10-2018 IPR025870 Glyoxalase-like domain BJD94_20965 ed4e70542507cd5bc1fd38f939be90f8 173 Gene3D G3DSA:3.40.190.10 23 158 1.5E-22 T 14-10-2018 BJD94_20965 ed4e70542507cd5bc1fd38f939be90f8 173 Gene3D G3DSA:3.40.190.10 36 134 1.5E-22 T 14-10-2018 BJD94_20965 ed4e70542507cd5bc1fd38f939be90f8 173 Pfam PF03466 LysR substrate binding domain 22 163 9.6E-12 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_20965 ed4e70542507cd5bc1fd38f939be90f8 173 SUPERFAMILY SSF53850 20 160 7.06E-22 T 14-10-2018 BJD94_02525 a82674246c183dc0f73bdd00c7670b4c 214 Pfam PF00857 Isochorismatase family 9 204 2.1E-22 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 BJD94_02525 a82674246c183dc0f73bdd00c7670b4c 214 SUPERFAMILY SSF52499 4 205 1.02E-24 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_02525 a82674246c183dc0f73bdd00c7670b4c 214 Gene3D G3DSA:3.40.50.850 6 210 7.0E-33 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_21380 1fd2bb05d31973da5c503e5bcac23622 415 SUPERFAMILY SSF56935 22 414 2.52E-91 T 14-10-2018 BJD94_21380 1fd2bb05d31973da5c503e5bcac23622 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 414 7.6E-127 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_21380 1fd2bb05d31973da5c503e5bcac23622 415 Gene3D G3DSA:2.40.160.60 22 415 3.0E-125 T 14-10-2018 BJD94_16110 b182fb7cff27e2d6cf289542f32aa5f3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 9.0E-56 T 14-10-2018 IPR014176 Phasin, subfamily 3 BJD94_16110 b182fb7cff27e2d6cf289542f32aa5f3 115 Pfam PF09361 Phasin protein 8 108 1.6E-20 T 14-10-2018 IPR018968 Phasin BJD94_16110 b182fb7cff27e2d6cf289542f32aa5f3 115 PIRSF PIRSF028226 1 115 1.2E-56 T 14-10-2018 IPR014176 Phasin, subfamily 3 BJD94_12880 951d73aa55a889fc3c8e1aef13cc6a58 153 SUPERFAMILY SSF103039 1 153 7.19E-38 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_12880 951d73aa55a889fc3c8e1aef13cc6a58 153 Gene3D G3DSA:3.40.1550.10 1 153 6.1E-46 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_12880 951d73aa55a889fc3c8e1aef13cc6a58 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 5.1E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.7E-37 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 SMART SM00971 9 113 4.4E-58 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.0E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:2.160.10.10 143 267 2.7E-37 T 14-10-2018 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 SUPERFAMILY SSF51161 8 258 5.24E-63 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:1.10.3130.10 1 142 9.3E-52 T 14-10-2018 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 75 262 4.9E-56 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 7 73 120.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_12265 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_03085 b5c6a533198448e323ee0983b28a2791 430 SUPERFAMILY SSF52540 2 376 1.65E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03085 b5c6a533198448e323ee0983b28a2791 430 Pfam PF13175 AAA ATPase domain 3 373 2.5E-19 T 14-10-2018 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 Pfam PF00654 Voltage gated chloride channel 88 435 2.3E-95 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 PRINTS PR00762 Chloride channel signature 181 200 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 PRINTS PR00762 Chloride channel signature 385 401 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 PRINTS PR00762 Chloride channel signature 403 422 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 PRINTS PR00762 Chloride channel signature 350 370 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 PRINTS PR00762 Chloride channel signature 100 117 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 Gene3D G3DSA:1.10.3080.10 29 467 1.5E-143 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 SUPERFAMILY SSF81340 26 451 6.15E-115 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD94_15645 c22a9bc0ece62eba28f6edd14ee2225f 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 51.248 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 BJD94_21575 46471a7663b093c668489990e3ce63b7 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.5E-39 T 14-10-2018 IPR018772 Transcription activator HlyU BJD94_00260 00bed2fb057f08be17abd6f160ebb31e 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BJD94_00260 00bed2fb057f08be17abd6f160ebb31e 280 Pfam PF01148 Cytidylyltransferase family 2 280 2.9E-68 T 14-10-2018 BJD94_03850 a66efdbcbb817d3e04c0a7392d8d7f8c 781 SUPERFAMILY SSF52540 456 626 1.13E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_03850 a66efdbcbb817d3e04c0a7392d8d7f8c 781 Gene3D G3DSA:3.40.50.300 454 597 5.0E-8 T 14-10-2018 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 Gene3D G3DSA:3.40.190.10 93 290 2.1E-74 T 14-10-2018 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 Gene3D G3DSA:1.10.10.10 4 92 5.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 SUPERFAMILY SSF53850 89 295 7.76E-53 T 14-10-2018 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 Pfam PF03466 LysR substrate binding domain 89 293 7.8E-51 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 Gene3D G3DSA:3.40.190.10 164 264 2.1E-74 T 14-10-2018 BJD94_20135 f8b178d264e1b0ed9ca9d5efb4244146 307 SUPERFAMILY SSF46785 5 113 1.77E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 1.7E-90 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 SUPERFAMILY SSF118215 30 444 1.2E-82 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.5E-14 T 14-10-2018 BJD94_07010 82324f22e2f6c28361c84ec885ceeaa8 468 Gene3D G3DSA:1.10.3860.10 21 463 5.7E-96 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_06580 17ccbb2235ebb74169bcb5977432b205 202 Pfam PF03942 DTW domain 3 188 1.2E-49 T 14-10-2018 IPR005636 DTW BJD94_06580 17ccbb2235ebb74169bcb5977432b205 202 SMART SM01144 1 193 2.3E-69 T 14-10-2018 IPR005636 DTW BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 Pfam PF07687 Peptidase dimerisation domain 182 274 4.4E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 Pfam PF01546 Peptidase family M20/M25/M40 72 367 2.1E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 PIRSF PIRSF001123 80 190 3.4E-4 T 14-10-2018 IPR008007 Peptidase M42 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 PIRSF PIRSF001123 290 368 0.0015 T 14-10-2018 IPR008007 Peptidase M42 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 PIRSF PIRSF001123 6 105 1.5 T 14-10-2018 IPR008007 Peptidase M42 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 Gene3D G3DSA:3.30.70.360 176 287 3.8E-113 T 14-10-2018 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 SUPERFAMILY SSF55031 177 289 7.2E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 Gene3D G3DSA:3.40.630.10 16 362 3.8E-113 T 14-10-2018 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 SUPERFAMILY SSF53187 7 367 2.34E-59 T 14-10-2018 BJD94_04705 4ea750f84be65d213ff2464f92e37cfc 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 1.9E-158 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like BJD94_14550 58e17670546bf0c910a9699d0fd2be52 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 4.4E-10 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 PIRSF PIRSF028788 1 197 1.7E-50 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 Pfam PF04993 TfoX N-terminal domain 12 103 2.5E-30 T 14-10-2018 IPR007076 TfoX, N-terminal BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 Gene3D G3DSA:3.30.1460.30 1 104 4.3E-36 T 14-10-2018 BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 Gene3D G3DSA:1.10.150.20 114 196 4.1E-23 T 14-10-2018 BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 SUPERFAMILY SSF159894 5 103 8.63E-31 T 14-10-2018 BJD94_01375 a3b0e8aca66a9ccae0e2966c55083996 197 Pfam PF04994 TfoX C-terminal domain 115 194 3.4E-31 T 14-10-2018 IPR007077 TfoX, C-terminal BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 Pfam PF13500 AAA domain 4 211 2.6E-39 T 14-10-2018 BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 PIRSF PIRSF006755 1 227 5.5E-79 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.967 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 8.7E-54 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 SUPERFAMILY SSF52540 2 213 1.2E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05475 bbc062d1f59fc4e210a63d03e61b8e6a 227 Gene3D G3DSA:3.40.50.300 2 224 1.4E-70 T 14-10-2018 BJD94_21735 33a7e9266b156a568627f4e47f4ea7da 461 Pfam PF01554 MatE 28 188 1.5E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_21735 33a7e9266b156a568627f4e47f4ea7da 461 Pfam PF01554 MatE 252 414 3.1E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_21735 33a7e9266b156a568627f4e47f4ea7da 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 426 2.8E-54 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_21735 33a7e9266b156a568627f4e47f4ea7da 461 PIRSF PIRSF006603 4 459 3.0E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_10320 9ca27347b10f0bd01afb0d3d6bde53eb 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 2.3E-89 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 BJD94_10320 9ca27347b10f0bd01afb0d3d6bde53eb 254 PIRSF PIRSF028069 4 254 2.1E-93 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 BJD94_16015 0a13564f3b0aa21a19de0d74fabf5aae 379 SUPERFAMILY SSF53474 73 228 2.32E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16015 0a13564f3b0aa21a19de0d74fabf5aae 379 Pfam PF01764 Lipase (class 3) 76 205 2.4E-19 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 BJD94_16015 0a13564f3b0aa21a19de0d74fabf5aae 379 Gene3D G3DSA:3.40.50.1820 41 261 2.0E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_14615 b5efe53b21bef7438328156cc61a25a8 477 PIRSF PIRSF006060 1 475 3.3E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_14615 b5efe53b21bef7438328156cc61a25a8 477 Gene3D G3DSA:1.20.1740.10 5 472 3.2E-8 T 14-10-2018 BJD94_14615 b5efe53b21bef7438328156cc61a25a8 477 Pfam PF13520 Amino acid permease 11 439 2.2E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_06320 68474da4817b295b68481455ff589646 182 Pfam PF00881 Nitroreductase family 8 161 4.4E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD94_06320 68474da4817b295b68481455ff589646 182 Gene3D G3DSA:3.40.109.10 1 182 1.3E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_06320 68474da4817b295b68481455ff589646 182 PIRSF PIRSF000232 1 182 1.1E-61 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BJD94_06320 68474da4817b295b68481455ff589646 182 SUPERFAMILY SSF55469 1 181 1.27E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD94_03405 95de66707b7980af3deb38ef9b420574 120 Gene3D G3DSA:3.10.180.10 1 120 6.7E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_03405 95de66707b7980af3deb38ef9b420574 120 SUPERFAMILY SSF54593 2 119 8.88E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_18800 c6a0d4d48b4046eb1cc9d897ca29c27c 99 SUPERFAMILY SSF52794 2 94 1.31E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD94_18800 c6a0d4d48b4046eb1cc9d897ca29c27c 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.8E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD94_18800 c6a0d4d48b4046eb1cc9d897ca29c27c 99 Gene3D G3DSA:3.40.50.2300 1 98 2.0E-36 T 14-10-2018 BJD94_18800 c6a0d4d48b4046eb1cc9d897ca29c27c 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 1.7E-32 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 Gene3D G3DSA:3.20.110.10 1 239 4.4E-72 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 Gene3D G3DSA:2.70.98.30 451 727 4.0E-61 T 14-10-2018 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 Gene3D G3DSA:1.20.1270.50 244 339 1.1E-29 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 SUPERFAMILY SSF74650 353 780 2.32E-28 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 3 222 3.4E-27 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 SUPERFAMILY SSF88688 248 339 2.39E-12 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 SUPERFAMILY SSF88713 2 234 3.34E-34 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 Pfam PF09261 Alpha mannosidase middle domain 247 317 3.0E-9 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BJD94_16245 2b7408151a45ad5248c2254048e77ba7 809 SMART SM00872 246 317 4.3E-13 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BJD94_00035 eba84bf10b2ec05d1b78b7105f0a50a8 193 SUPERFAMILY SSF88697 2 182 6.96E-43 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_00035 eba84bf10b2ec05d1b78b7105f0a50a8 193 Gene3D G3DSA:2.30.130.40 1 104 1.7E-26 T 14-10-2018 BJD94_00035 eba84bf10b2ec05d1b78b7105f0a50a8 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 132 5.3E-14 T 14-10-2018 IPR003111 Lon, substrate-binding domain BJD94_14815 eba84bf10b2ec05d1b78b7105f0a50a8 193 SUPERFAMILY SSF88697 2 182 6.96E-43 T 14-10-2018 IPR015947 PUA-like superfamily BJD94_14815 eba84bf10b2ec05d1b78b7105f0a50a8 193 Gene3D G3DSA:2.30.130.40 1 104 1.7E-26 T 14-10-2018 BJD94_14815 eba84bf10b2ec05d1b78b7105f0a50a8 193 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 132 5.3E-14 T 14-10-2018 IPR003111 Lon, substrate-binding domain BJD94_04480 2625865f2401c536ba3afeb689f2e83e 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 6.1E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 BJD94_09925 9ccd7a86275ec503a561f4667e10fb98 273 Pfam PF00483 Nucleotidyl transferase 9 265 1.1E-30 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD94_09925 9ccd7a86275ec503a561f4667e10fb98 273 SUPERFAMILY SSF53448 2 268 4.12E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_09925 9ccd7a86275ec503a561f4667e10fb98 273 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.4E-122 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BJD94_09925 9ccd7a86275ec503a561f4667e10fb98 273 Gene3D G3DSA:3.90.550.10 1 271 5.3E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_21295 ef6c422bd893d4df93493a6870ffb6ea 197 PIRSF PIRSF011489 1 196 6.0E-87 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 BJD94_21295 ef6c422bd893d4df93493a6870ffb6ea 197 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 5.4E-29 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 616 1.4E-171 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 619 7.6E-62 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 Pfam PF01578 Cytochrome C assembly protein 89 295 2.3E-42 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_05810 5ee197e55fa8c7ae332d2e72c47d72b8 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.3E-70 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 SUPERFAMILY SSF53720 3 449 2.62E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 Gene3D G3DSA:3.40.605.10 7 448 6.2E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 1.7E-121 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 Gene3D G3DSA:3.40.309.10 247 436 6.2E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 1.4E-229 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_12495 4aa38ffdb783da72a1fa4717d0f6a8d2 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.896 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 BJD94_11625 d4c9158b584eb9874e45a332c95b6d14 332 SUPERFAMILY SSF53474 35 319 1.28E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_11625 d4c9158b584eb9874e45a332c95b6d14 332 Pfam PF12146 Serine aminopeptidase, S33 53 310 2.9E-58 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 BJD94_11625 d4c9158b584eb9874e45a332c95b6d14 332 Gene3D G3DSA:3.40.50.1820 26 329 3.0E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_19950 39ef1ad304b746203f4ccdc115ddca98 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 3.0E-47 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD94_19950 39ef1ad304b746203f4ccdc115ddca98 177 SUPERFAMILY SSF89028 7 169 2.75E-35 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD94_19950 39ef1ad304b746203f4ccdc115ddca98 177 Pfam PF01923 Cobalamin adenosyltransferase 20 156 4.9E-14 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD94_19950 39ef1ad304b746203f4ccdc115ddca98 177 Gene3D G3DSA:1.20.1200.10 17 173 5.9E-22 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 Gene3D G3DSA:3.40.50.720 2 313 1.0E-106 T 14-10-2018 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 9.3E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 Gene3D G3DSA:3.40.50.720 104 305 1.0E-106 T 14-10-2018 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 320 4.5E-13 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 SUPERFAMILY SSF52283 1 124 1.25E-19 T 14-10-2018 BJD94_17285 508c958096e57860c02a7f8185bb0141 328 SUPERFAMILY SSF51735 106 289 3.96E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_01220 8c128a3ae9c408550e9f805c18322168 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 4.7E-269 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 Pfam PF01235 Sodium:alanine symporter family 54 448 3.5E-138 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.5E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 9.1E-152 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_04375 890a2199c08bb37c2c43ee1aad7d5eba 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BJD94_16270 f51ea3798119271dc66850337611b7d4 116 Pfam PF10973 Protein of unknown function (DUF2799) 29 103 2.8E-14 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 BJD94_17395 ac4964bb9f55968e81c8f87320dba348 344 Gene3D G3DSA:3.20.20.210 1 344 6.1E-136 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_17395 ac4964bb9f55968e81c8f87320dba348 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 7 331 3.2E-36 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD94_17395 ac4964bb9f55968e81c8f87320dba348 344 PIRSF PIRSF005632 1 344 4.7E-194 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit BJD94_17395 ac4964bb9f55968e81c8f87320dba348 344 SUPERFAMILY SSF51726 9 343 1.12E-69 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 4.7E-43 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 Pfam PF01491 Frataxin-like domain 1 100 1.3E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 SUPERFAMILY SSF55387 1 103 3.66E-39 T 14-10-2018 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 Gene3D G3DSA:3.30.920.10 1 104 1.4E-37 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 SMART SM01219 1 104 1.3E-54 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.521 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11565 e067f4b14e564076a0cdfeca1b7d312d 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_11875 99a2811baf630906642b1635e9fdc556 145 SUPERFAMILY SSF55729 9 118 2.7E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_11875 99a2811baf630906642b1635e9fdc556 145 Pfam PF13673 Acetyltransferase (GNAT) domain 32 117 1.1E-9 T 14-10-2018 IPR000182 GNAT domain BJD94_11875 99a2811baf630906642b1635e9fdc556 145 Gene3D G3DSA:3.40.630.30 14 138 3.8E-10 T 14-10-2018 BJD94_21320 2f5f62cc94a5835764ad3a7ff0d383de 189 Gene3D G3DSA:2.40.128.110 23 189 6.4E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD94_21320 2f5f62cc94a5835764ad3a7ff0d383de 189 SMART SM00867 24 187 2.3E-59 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD94_21320 2f5f62cc94a5835764ad3a7ff0d383de 189 SUPERFAMILY SSF101874 23 188 1.31E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD94_21320 2f5f62cc94a5835764ad3a7ff0d383de 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 46.254 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI BJD94_21320 2f5f62cc94a5835764ad3a7ff0d383de 189 Pfam PF04264 YceI-like domain 25 184 2.8E-34 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 6.3E-216 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.426 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 Gene3D G3DSA:1.20.200.10 198 509 3.5E-123 T 14-10-2018 BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 Pfam PF00221 Aromatic amino acid lyase 11 471 1.1E-187 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 Gene3D G3DSA:1.10.275.10 2 197 4.4E-71 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD94_02600 0eba340276c19f949b15d0c0162d25fd 511 SUPERFAMILY SSF48557 5 506 1.96E-192 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.3E-57 T 14-10-2018 BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 Gene3D G3DSA:3.40.50.720 1 252 5.7E-72 T 14-10-2018 BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 SUPERFAMILY SSF51735 6 250 3.47E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0014 T 14-10-2018 BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_15400 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_11650 38670082e860e6cc65c82d14a21293d4 169 SUPERFAMILY SSF52799 17 164 5.17E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD94_11650 38670082e860e6cc65c82d14a21293d4 169 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 114 124 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 BJD94_11650 38670082e860e6cc65c82d14a21293d4 169 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 20 133 4.3E-8 T 14-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD94_11650 38670082e860e6cc65c82d14a21293d4 169 Gene3D G3DSA:3.90.190.10 6 169 4.9E-28 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 SUPERFAMILY SSF56112 78 345 2.29E-53 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 SMART SM00220 100 399 3.5E-35 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 Pfam PF00069 Protein kinase domain 100 317 9.1E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 227 239 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 Gene3D G3DSA:3.30.200.20 38 188 2.0E-25 T 14-10-2018 BJD94_15200 7fc7ccea0217c67bde618f8cb9879e9b 722 Gene3D G3DSA:1.10.510.10 189 378 5.2E-31 T 14-10-2018 BJD94_19105 127be92290fb94a778d8417edc8b1bc2 98 SUPERFAMILY SSF81296 12 95 4.25E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set BJD94_19105 127be92290fb94a778d8417edc8b1bc2 98 Gene3D G3DSA:2.60.40.10 3 96 7.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_07955 86dac0f4c236e58ad449d7fd75d47d0e 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 3.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07955 86dac0f4c236e58ad449d7fd75d47d0e 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.5E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07955 86dac0f4c236e58ad449d7fd75d47d0e 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 SMART SM00448 3 115 4.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 Gene3D G3DSA:3.40.50.2300 2 124 9.6E-29 T 14-10-2018 BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 Gene3D G3DSA:3.40.1550.10 139 328 1.0E-30 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 Pfam PF00072 Response regulator receiver domain 5 115 2.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 SUPERFAMILY SSF52172 4 122 3.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_16055 aaaf3f3bd2937098b3560b072778b1b3 334 SUPERFAMILY SSF103039 140 327 3.14E-37 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_02575 ad66b67a5dfde7b4a7973f184b73f11e 229 Pfam PF11813 Protein of unknown function (DUF3334) 4 229 5.6E-116 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 BJD94_02575 ad66b67a5dfde7b4a7973f184b73f11e 229 SUPERFAMILY SSF103039 10 173 2.09E-24 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_02575 ad66b67a5dfde7b4a7973f184b73f11e 229 Gene3D G3DSA:3.40.1550.10 8 173 4.3E-20 T 14-10-2018 IPR028976 CheC-like superfamily BJD94_12580 05b8f1f8a771003467e2e92aa02d3855 124 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 1 124 2.9E-53 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BJD94_12580 05b8f1f8a771003467e2e92aa02d3855 124 SUPERFAMILY SSF75169 2 124 2.16E-37 T 14-10-2018 IPR027396 DsrEFH-like BJD94_12580 05b8f1f8a771003467e2e92aa02d3855 124 Pfam PF02635 DsrE/DsrF-like family 2 124 2.9E-28 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein BJD94_12580 05b8f1f8a771003467e2e92aa02d3855 124 Gene3D G3DSA:3.40.1260.10 1 124 4.3E-51 T 14-10-2018 IPR027396 DsrEFH-like BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 PIRSF PIRSF000545 1 307 1.1E-146 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 175.049 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 2.3E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 SUPERFAMILY SSF52540 3 307 1.19E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 232 5.7E-13 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BJD94_11890 f368991c145d8ebf8e5218426380b8d3 307 Gene3D G3DSA:3.40.50.300 1 307 1.5E-90 T 14-10-2018 BJD94_01760 e421bf6c83c1162c4df81170f932986a 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 2.9E-18 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 BJD94_00740 c58156ac8ae95e99f7ae72040cd89fd2 161 SUPERFAMILY SSF82093 30 142 1.57E-37 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 BJD94_00740 c58156ac8ae95e99f7ae72040cd89fd2 161 Pfam PF03100 CcmE 4 136 2.0E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD94_00740 c58156ac8ae95e99f7ae72040cd89fd2 161 Gene3D G3DSA:2.40.50.140 30 142 7.0E-40 T 14-10-2018 BJD94_00740 c58156ac8ae95e99f7ae72040cd89fd2 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 31.918 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD94_19465 6295b5854b2b0931d099007f90407043 436 Pfam PF02321 Outer membrane efflux protein 22 213 9.3E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_19465 6295b5854b2b0931d099007f90407043 436 Pfam PF02321 Outer membrane efflux protein 236 417 1.1E-34 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_19465 6295b5854b2b0931d099007f90407043 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 432 4.1E-91 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BJD94_19465 6295b5854b2b0931d099007f90407043 436 Gene3D G3DSA:1.20.1600.10 21 427 1.7E-80 T 14-10-2018 BJD94_19465 6295b5854b2b0931d099007f90407043 436 SUPERFAMILY SSF56954 4 419 1.7E-84 T 14-10-2018 BJD94_00955 191bf719d63fbbe0d66a89c3c74db822 145 PIRSF PIRSF006173 1 144 5.5E-65 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 BJD94_00955 191bf719d63fbbe0d66a89c3c74db822 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.0E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BJD94_00955 191bf719d63fbbe0d66a89c3c74db822 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.704 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 BJD94_21635 5d939db899e6a1df4ed98aab33dcfddd 122 Gene3D G3DSA:2.40.50.200 18 122 2.2E-16 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BJD94_21635 5d939db899e6a1df4ed98aab33dcfddd 122 Pfam PF04076 Bacterial OB fold (BOF) protein 48 116 1.7E-10 T 14-10-2018 IPR005220 Bacterial OB-fold BJD94_21635 5d939db899e6a1df4ed98aab33dcfddd 122 SUPERFAMILY SSF101756 19 121 2.35E-22 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily BJD94_03605 122f2cb4deb56491ee2fa77c2e0c16a9 139 SUPERFAMILY SSF55729 50 123 3.96E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03605 122f2cb4deb56491ee2fa77c2e0c16a9 139 Pfam PF13508 Acetyltransferase (GNAT) domain 58 115 1.6E-6 T 14-10-2018 IPR000182 GNAT domain BJD94_03605 122f2cb4deb56491ee2fa77c2e0c16a9 139 Gene3D G3DSA:3.40.630.30 1 131 7.2E-29 T 14-10-2018 BJD94_00610 4fc41088834a753363657d90fa8c5533 143 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.6E-34 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BJD94_00610 4fc41088834a753363657d90fa8c5533 143 Pfam PF02050 Flagellar FliJ protein 18 140 3.7E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BJD94_07365 b15608effee8cdb7a350c8b5e0102a00 196 Hamap MF_00789 UPF0319 protein YccT [yccT]. 2 193 24.283 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BJD94_07365 b15608effee8cdb7a350c8b5e0102a00 196 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 21 190 3.6E-30 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BJD94_11710 d60cfd2cefcc6b48e458111ec0926681 322 PIRSF PIRSF003097 24 318 8.4E-59 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 SMART SM00862 146 220 1.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 SUPERFAMILY SSF52172 1 167 2.99E-37 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 Pfam PF00072 Response regulator receiver domain 3 112 4.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 Gene3D G3DSA:1.10.10.10 126 222 8.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.6E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-35 T 14-10-2018 BJD94_06810 db6a20e092423285cfa7c7b52740ca73 222 SMART SM00448 1 113 2.3E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 Pfam PF00551 Formyl transferase 6 183 3.1E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 Gene3D G3DSA:3.10.25.10 210 314 3.6E-36 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 3.3E-106 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 SUPERFAMILY SSF53328 3 207 1.24E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 5.6E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 SUPERFAMILY SSF50486 208 310 5.02E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.834 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BJD94_10950 b2db19c116f6d6999b06c47f1d8c9f12 315 Gene3D G3DSA:3.40.50.170 1 209 6.3E-88 T 14-10-2018 BJD94_06195 8cc8869d4f8fb2b8f56cbee6bbca47ba 209 Gene3D G3DSA:3.40.30.10 1 208 1.2E-57 T 14-10-2018 BJD94_06195 8cc8869d4f8fb2b8f56cbee6bbca47ba 209 SUPERFAMILY SSF52833 1 184 3.74E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_06195 8cc8869d4f8fb2b8f56cbee6bbca47ba 209 Pfam PF13743 Thioredoxin 6 175 1.1E-21 T 14-10-2018 BJD94_06535 2bc9720c1f5df486798433607beef09a 497 SUPERFAMILY SSF56801 32 489 5.76E-82 T 14-10-2018 BJD94_06535 2bc9720c1f5df486798433607beef09a 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_06535 2bc9720c1f5df486798433607beef09a 497 Pfam PF00501 AMP-binding enzyme 37 400 2.7E-50 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_06535 2bc9720c1f5df486798433607beef09a 497 Gene3D G3DSA:3.40.50.12780 27 396 2.5E-64 T 14-10-2018 BJD94_06535 2bc9720c1f5df486798433607beef09a 497 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 56 488 9.7E-128 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BJD94_06535 2bc9720c1f5df486798433607beef09a 497 Gene3D G3DSA:3.30.300.30 397 475 6.1E-15 T 14-10-2018 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 SUPERFAMILY SSF48452 38 196 2.65E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 SMART SM00028 72 105 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 SMART SM00028 38 71 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 SMART SM00028 142 175 7.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 SMART SM00028 106 139 41.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 Gene3D G3DSA:1.25.40.10 37 243 8.1E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 Pfam PF13431 Tetratricopeptide repeat 94 125 6.2E-8 T 14-10-2018 BJD94_04720 06ca89e990f55331a5954d4277bc050a 244 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 5.6E-86 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW BJD94_15050 e0e709edd648743e86348b899fed4ee1 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 1.0E-125 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BJD94_15050 e0e709edd648743e86348b899fed4ee1 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 1.7E-144 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 BJD94_12520 ff5d6fd57a7af6b082726968e61aa22a 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_12520 ff5d6fd57a7af6b082726968e61aa22a 325 SUPERFAMILY SSF53474 31 299 1.32E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_12520 ff5d6fd57a7af6b082726968e61aa22a 325 PIRSF PIRSF005211 1 324 1.9E-103 T 14-10-2018 IPR012020 AB hydrolase 4 family BJD94_01850 e92c51472bbadf09b94b6666abe0f4db 459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 19 459 1.3E-144 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase BJD94_01850 e92c51472bbadf09b94b6666abe0f4db 459 Gene3D G3DSA:1.10.760.10 312 459 4.7E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_01850 e92c51472bbadf09b94b6666abe0f4db 459 SUPERFAMILY SSF46626 317 459 1.65E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_01850 e92c51472bbadf09b94b6666abe0f4db 459 PIRSF PIRSF028099 7 459 1.0E-184 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Gene3D G3DSA:2.40.50.140 653 764 1.7E-26 T 14-10-2018 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Pfam PF00773 RNB domain 267 594 1.2E-106 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SUPERFAMILY SSF50249 227 650 8.0E-144 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SMART SM00316 650 733 6.0E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SUPERFAMILY SSF50249 71 154 2.29E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SUPERFAMILY SSF50249 145 244 3.38E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 3.5E-255 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Pfam PF08206 Ribonuclease B OB domain 91 151 1.4E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.8E-12 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Gene3D G3DSA:2.40.50.140 77 155 2.4E-11 T 14-10-2018 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SMART SM00357 90 152 1.8E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Pfam PF00575 S1 RNA binding domain 650 731 9.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.258 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SMART SM00955 267 595 4.7E-185 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 SUPERFAMILY SSF50249 651 739 7.86E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_12450 96c7b597e8e0b5d094d49e517a5420ea 817 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 733 1.9E-274 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BJD94_06865 b25d3637d6b4e33d7c2874358be36c6a 284 SUPERFAMILY SSF53474 9 282 3.06E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_06865 b25d3637d6b4e33d7c2874358be36c6a 284 Pfam PF00561 alpha/beta hydrolase fold 27 140 5.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_06865 b25d3637d6b4e33d7c2874358be36c6a 284 Gene3D G3DSA:3.40.50.1820 1 277 2.8E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 SUPERFAMILY SSF54631 262 320 2.75E-8 T 14-10-2018 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 Gene3D G3DSA:3.40.50.10490 6 195 5.9E-66 T 14-10-2018 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 Pfam PF01380 SIS domain 41 172 7.3E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 1.6E-112 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 SUPERFAMILY SSF53697 9 282 1.13E-67 T 14-10-2018 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 SMART SM00116 210 258 0.2 T 14-10-2018 IPR000644 CBS domain BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 SMART SM00116 275 322 5.0 T 14-10-2018 IPR000644 CBS domain BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 Pfam PF00571 CBS domain 203 258 3.7E-4 T 14-10-2018 IPR000644 CBS domain BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 Pfam PF00571 CBS domain 268 320 1.2E-5 T 14-10-2018 IPR000644 CBS domain BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 Gene3D G3DSA:3.10.580.10 196 320 1.0E-43 T 14-10-2018 BJD94_09525 50d19d94885744fa5661071adfc16c4f 323 PIRSF PIRSF004692 1 323 1.4E-129 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BJD94_15500 24a301ae186c6da1a049384f524bb2ce 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 2.0E-16 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 BJD94_15500 24a301ae186c6da1a049384f524bb2ce 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 1.0E-18 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 BJD94_02840 cee362aa2c882bb02ec8fe0e24b39035 129 Pfam PF06271 RDD family 7 123 4.8E-14 T 14-10-2018 IPR010432 RDD BJD94_06940 502b4601596039dd3ad3e3bc4204a9b0 261 SUPERFAMILY SSF52540 3 216 2.71E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06940 502b4601596039dd3ad3e3bc4204a9b0 261 SMART SM00382 29 198 2.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_06940 502b4601596039dd3ad3e3bc4204a9b0 261 Gene3D G3DSA:3.40.50.300 1 239 1.6E-57 T 14-10-2018 BJD94_06940 502b4601596039dd3ad3e3bc4204a9b0 261 Pfam PF00005 ABC transporter 20 148 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_21760 71b6397274d883433722ad2f785f2211 425 SUPERFAMILY SSF48452 57 235 6.91E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 Gene3D G3DSA:1.25.40.10 170 399 3.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 SMART SM00028 66 99 72.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 SMART SM00028 342 375 390.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 SMART SM00028 278 311 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 SMART SM00028 104 137 0.61 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_21760 71b6397274d883433722ad2f785f2211 425 Pfam PF13428 Tetratricopeptide repeat 107 149 3.9E-5 T 14-10-2018 BJD94_21760 71b6397274d883433722ad2f785f2211 425 Gene3D G3DSA:1.25.40.10 33 169 6.0E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_03635 086a44ad56dc3c3a8fb6f50eea4ae190 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 151 1.0E-9 T 14-10-2018 IPR000182 GNAT domain BJD94_03635 086a44ad56dc3c3a8fb6f50eea4ae190 165 Gene3D G3DSA:3.40.630.30 1 159 2.8E-44 T 14-10-2018 BJD94_03635 086a44ad56dc3c3a8fb6f50eea4ae190 165 SUPERFAMILY SSF55729 12 147 5.5E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 Pfam PF01545 Cation efflux family 15 206 6.9E-45 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 SUPERFAMILY SSF160240 210 288 8.89E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 Gene3D G3DSA:3.30.70.1350 207 290 5.3E-30 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.1E-70 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 SUPERFAMILY SSF161111 8 207 1.11E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 Gene3D G3DSA:1.20.1510.10 8 206 2.0E-62 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD94_12170 2b61f0cdb587e65259a5183ce9de55df 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 9.4E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BJD94_10390 b8507f627746848b206003a89469be84 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 77 152 1.3E-23 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 Pfam PF03449 Transcription elongation factor, N-terminal 1 70 7.2E-25 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 Gene3D G3DSA:3.10.50.30 73 155 5.2E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 116 132 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 Gene3D G3DSA:1.10.287.180 1 72 3.0E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 151 26.682 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BJD94_10390 b8507f627746848b206003a89469be84 156 SUPERFAMILY SSF46557 2 73 7.32E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 13 44 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 153 50.108 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 1 153 2.1E-71 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BJD94_10390 b8507f627746848b206003a89469be84 156 SUPERFAMILY SSF54534 76 152 3.14E-20 T 14-10-2018 BJD94_10390 b8507f627746848b206003a89469be84 156 PIRSF PIRSF006092 1 154 5.0E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD94_15980 2e7082d91fbf35134fc8203f8e65ac10 172 Gene3D G3DSA:3.40.630.30 3 167 8.7E-37 T 14-10-2018 BJD94_15980 2e7082d91fbf35134fc8203f8e65ac10 172 SUPERFAMILY SSF55729 4 155 1.9E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_15980 2e7082d91fbf35134fc8203f8e65ac10 172 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 4.6E-24 T 14-10-2018 IPR000182 GNAT domain BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Gene3D G3DSA:3.30.1360.200 296 423 7.2E-23 T 14-10-2018 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 350 592 2.8E-72 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Gene3D G3DSA:3.30.70.3400 221 295 1.2E-15 T 14-10-2018 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Gene3D G3DSA:1.20.1640.10 424 612 9.9E-10 T 14-10-2018 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 SUPERFAMILY SSF82866 409 606 2.75E-40 T 14-10-2018 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Pfam PF02355 Protein export membrane protein 432 600 3.7E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 13 614 42.296 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 136 600 3.2E-130 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Pfam PF07549 SecD/SecF GG Motif 129 153 6.3E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD94_16130 29fd853c1a2a0a5b7f3e289109cd9905 614 Pfam PF13721 SecD export protein N-terminal TM region 12 113 1.9E-23 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain BJD94_07610 cdb2727616e6cdc56080f48a0824d618 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 24.296 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BJD94_07610 cdb2727616e6cdc56080f48a0824d618 176 Gene3D G3DSA:3.30.160.150 18 167 1.1E-49 T 14-10-2018 BJD94_07610 cdb2727616e6cdc56080f48a0824d618 176 Pfam PF04390 Lipopolysaccharide-assembly 41 159 2.9E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BJD94_17000 e11606449f66bf75e728cb65273b40e7 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 6.1E-22 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal BJD94_17000 e11606449f66bf75e728cb65273b40e7 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 6.9E-28 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD94_17000 e11606449f66bf75e728cb65273b40e7 211 SUPERFAMILY SSF89623 1 160 4.45E-35 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD94_17000 e11606449f66bf75e728cb65273b40e7 211 Gene3D G3DSA:3.40.1400.10 1 211 9.4E-99 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 Gene3D G3DSA:3.30.470.30 51 151 4.7E-54 T 14-10-2018 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 SUPERFAMILY SSF56091 27 198 1.9E-38 T 14-10-2018 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 Pfam PF14743 DNA ligase OB-like domain 212 277 2.5E-26 T 14-10-2018 IPR029319 DNA ligase, OB-like domain BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 Gene3D G3DSA:3.30.1490.70 31 190 4.7E-54 T 14-10-2018 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 SUPERFAMILY SSF50249 173 277 5.54E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 Pfam PF01068 ATP dependent DNA ligase domain 41 198 1.8E-7 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BJD94_04195 64aad6def2d7ba1b13926fce23c4620f 280 Gene3D G3DSA:2.40.50.140 198 280 1.9E-8 T 14-10-2018 BJD94_05205 aa60afb50d0d51cb35a2c76cba7e7726 320 Gene3D G3DSA:1.10.3720.10 69 308 2.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05205 aa60afb50d0d51cb35a2c76cba7e7726 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.7E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_05205 aa60afb50d0d51cb35a2c76cba7e7726 320 SUPERFAMILY SSF161098 69 298 5.72E-20 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_16355 68a811e030993a2a224480fda4fb1c5e 253 SUPERFAMILY SSF56235 2 250 1.2E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_16355 68a811e030993a2a224480fda4fb1c5e 253 Pfam PF13230 Glutamine amidotransferases class-II 25 198 5.8E-20 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 BJD94_16355 68a811e030993a2a224480fda4fb1c5e 253 Gene3D G3DSA:3.60.20.10 1 252 1.3E-87 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD94_20810 bd7de97d8793b832ae94ba149ed84711 337 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 33 331 2.2E-136 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT BJD94_20810 bd7de97d8793b832ae94ba149ed84711 337 SUPERFAMILY SSF53822 33 297 7.07E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_20810 bd7de97d8793b832ae94ba149ed84711 337 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 287 2.4E-31 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BJD94_20810 bd7de97d8793b832ae94ba149ed84711 337 Gene3D G3DSA:3.40.50.2300 141 327 3.7E-116 T 14-10-2018 BJD94_20810 bd7de97d8793b832ae94ba149ed84711 337 Gene3D G3DSA:3.40.50.2300 34 303 3.7E-116 T 14-10-2018 BJD94_19760 838bcd71275ad3995f64221323747b03 277 SUPERFAMILY SSF52540 17 145 2.45E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19760 838bcd71275ad3995f64221323747b03 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 6.3E-60 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS BJD94_14995 4e9a31be38506145d20c713e16f96ab7 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 124 1.1E-17 T 14-10-2018 IPR000182 GNAT domain BJD94_14995 4e9a31be38506145d20c713e16f96ab7 156 SUPERFAMILY SSF55729 1 142 4.05E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_14995 4e9a31be38506145d20c713e16f96ab7 156 Gene3D G3DSA:3.40.630.30 1 147 1.8E-33 T 14-10-2018 BJD94_13300 68e84c34d2a026ebe2ee232a49e24183 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 2.1E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BJD94_13300 68e84c34d2a026ebe2ee232a49e24183 102 Gene3D G3DSA:1.20.58.280 1 101 2.2E-34 T 14-10-2018 BJD94_13300 68e84c34d2a026ebe2ee232a49e24183 102 PIRSF PIRSF000699 1 102 1.8E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BJD94_13300 68e84c34d2a026ebe2ee232a49e24183 102 SUPERFAMILY SSF46973 2 98 1.01E-33 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BJD94_10840 f024a56de43c4a18de2aa7439e44f792 444 Pfam PF02581 Thiamine monophosphate synthase 222 400 7.8E-54 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD94_10840 f024a56de43c4a18de2aa7439e44f792 444 Gene3D G3DSA:3.20.20.70 201 420 3.0E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10840 f024a56de43c4a18de2aa7439e44f792 444 SUPERFAMILY SSF51391 212 416 2.09E-60 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD94_10840 f024a56de43c4a18de2aa7439e44f792 444 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 224 411 6.0E-45 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD94_10840 f024a56de43c4a18de2aa7439e44f792 444 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 204 418 19.039 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD94_10575 7b4c85cdf62d985e187fd98cf78407b4 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.354 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 BJD94_10575 7b4c85cdf62d985e187fd98cf78407b4 181 Pfam PF04220 Der GTPase activator (YihI) 21 171 1.5E-43 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 SUPERFAMILY SSF53850 89 287 1.38E-37 T 14-10-2018 BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 Pfam PF03466 LysR substrate binding domain 88 286 1.6E-39 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 Gene3D G3DSA:3.40.190.290 90 290 7.0E-73 T 14-10-2018 BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 Gene3D G3DSA:1.10.10.10 1 89 2.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_00895 8ba3d92502319fafd36aa0336d09e9ae 291 SUPERFAMILY SSF46785 1 83 1.12E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_20630 d4aa3f42405e52bf56244d9b2e722568 97 Pfam PF04964 Flp/Fap pilin component 25 70 5.4E-14 T 14-10-2018 IPR007047 Flp/Fap pilin component BJD94_11720 8c1c7eca1d017aa3da3611961167a6bc 106 SMART SM00450 7 102 2.2E-17 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_11720 8c1c7eca1d017aa3da3611961167a6bc 106 Gene3D G3DSA:3.40.250.10 1 101 4.5E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_11720 8c1c7eca1d017aa3da3611961167a6bc 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.601 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 BJD94_11720 8c1c7eca1d017aa3da3611961167a6bc 106 SUPERFAMILY SSF52821 1 105 1.96E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_11720 8c1c7eca1d017aa3da3611961167a6bc 106 Pfam PF00581 Rhodanese-like domain 13 98 4.4E-11 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_14440 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07670 Nucleoside recognition 95 191 3.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_14440 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BJD94_14440 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 8.7E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BJD94_14440 118b28dab1ed18dc6be54d7411882b28 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 7.9E-150 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BJD94_13445 730482343b651858a7db0faaed884770 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 9.7E-68 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BJD94_13445 730482343b651858a7db0faaed884770 239 Pfam PF02390 Putative methyltransferase 62 232 2.5E-58 T 14-10-2018 BJD94_13445 730482343b651858a7db0faaed884770 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.623 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BJD94_13445 730482343b651858a7db0faaed884770 239 Gene3D G3DSA:3.40.50.150 29 239 7.5E-70 T 14-10-2018 BJD94_13445 730482343b651858a7db0faaed884770 239 SUPERFAMILY SSF53335 16 237 1.94E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_21475 31778b9ad68529e28589e6894c7e460e 813 Pfam PF12704 MacB-like periplasmic core domain 29 192 1.0E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_21475 31778b9ad68529e28589e6894c7e460e 813 Pfam PF02687 FtsX-like permease family 279 371 2.2E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_21475 31778b9ad68529e28589e6894c7e460e 813 Pfam PF02687 FtsX-like permease family 721 803 6.1E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_09000 59ea39987ea4905ae4d6b51c3b56dd9f 367 Gene3D G3DSA:3.40.50.300 13 185 2.8E-20 T 14-10-2018 BJD94_09000 59ea39987ea4905ae4d6b51c3b56dd9f 367 SUPERFAMILY SSF52540 62 201 2.74E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09000 59ea39987ea4905ae4d6b51c3b56dd9f 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.069 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 BJD94_09000 59ea39987ea4905ae4d6b51c3b56dd9f 367 Pfam PF03969 AFG1-like ATPase 1 364 1.4E-155 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 SUPERFAMILY SSF53822 61 330 1.22E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_14665 d114c28277549a324ee4f90adad80eba 333 SMART SM00354 1 71 6.6E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.4E-36 T 14-10-2018 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 Gene3D G3DSA:3.40.50.2300 63 321 9.5E-73 T 14-10-2018 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 Gene3D G3DSA:3.40.50.2300 160 326 9.5E-73 T 14-10-2018 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 SUPERFAMILY SSF47413 1 60 6.84E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_14665 d114c28277549a324ee4f90adad80eba 333 Gene3D G3DSA:1.10.260.40 1 59 2.6E-21 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.30.1950.10 45 100 1.2E-15 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 395 445 5.4E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 104 148 7.5E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 299 351 6.5E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 494 537 8.1E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 211 252 5.8E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF10531 SLBB domain 589 632 1.4E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 101 181 1.2E-15 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 95 6.1E-12 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 481 575 3.8E-18 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 577 670 3.5E-18 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 288 377 2.5E-17 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 199 287 1.0E-15 T 14-10-2018 BJD94_04210 a5d065c7f40a4dd02f0d1ccbe33a3538 699 Gene3D G3DSA:3.10.560.10 386 473 4.8E-13 T 14-10-2018 BJD94_09870 e651f3df8f75fcb377f25aa66924d9f5 100 Pfam PF00276 Ribosomal protein L23 9 95 1.4E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BJD94_09870 e651f3df8f75fcb377f25aa66924d9f5 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09870 e651f3df8f75fcb377f25aa66924d9f5 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BJD94_09870 e651f3df8f75fcb377f25aa66924d9f5 100 Gene3D G3DSA:3.30.70.330 1 100 4.0E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD94_09870 e651f3df8f75fcb377f25aa66924d9f5 100 SUPERFAMILY SSF54189 3 92 3.6E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD94_16075 27a873f1fb90c6961309e1790aa67b6e 101 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.446 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BJD94_16075 27a873f1fb90c6961309e1790aa67b6e 101 Pfam PF03927 NapD protein 6 80 9.7E-29 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly BJD94_16075 27a873f1fb90c6961309e1790aa67b6e 101 Gene3D G3DSA:3.30.70.920 6 75 1.1E-22 T 14-10-2018 BJD94_21000 22873375a7741e25199d567011fbded9 585 Pfam PF13519 von Willebrand factor type A domain 112 217 3.1E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_21000 22873375a7741e25199d567011fbded9 585 SUPERFAMILY SSF53300 110 278 1.6E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_21000 22873375a7741e25199d567011fbded9 585 Gene3D G3DSA:3.40.50.410 107 290 4.0E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_05695 442838afba2aa414c2050ec424cc9907 324 Pfam PF02618 YceG-like family 29 315 2.3E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BJD94_05695 442838afba2aa414c2050ec424cc9907 324 Gene3D G3DSA:1.10.8.1150 24 97 5.2E-6 T 14-10-2018 BJD94_05695 442838afba2aa414c2050ec424cc9907 324 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 320 32.189 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BJD94_05695 442838afba2aa414c2050ec424cc9907 324 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 323 3.2E-97 T 14-10-2018 IPR003770 Endolytic murein transglycosylase BJD94_05695 442838afba2aa414c2050ec424cc9907 324 Gene3D G3DSA:3.30.160.60 289 324 2.8E-18 T 14-10-2018 BJD94_00880 90c1eaf32b272c224861feac5bf81bf7 187 SUPERFAMILY SSF110997 110 183 4.84E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_00880 90c1eaf32b272c224861feac5bf81bf7 187 Gene3D G3DSA:3.30.70.1070 105 180 2.5E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_00880 90c1eaf32b272c224861feac5bf81bf7 187 Pfam PF05036 Sporulation related domain 111 178 4.5E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_13045 bffe5fdca954a77788e5577deb88e025 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.881 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD94_13045 bffe5fdca954a77788e5577deb88e025 179 Gene3D G3DSA:2.40.50.140 2 147 7.6E-51 T 14-10-2018 BJD94_13045 bffe5fdca954a77788e5577deb88e025 179 Pfam PF00436 Single-strand binding protein family 6 105 1.3E-42 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD94_13045 bffe5fdca954a77788e5577deb88e025 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 2.3E-62 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD94_13045 bffe5fdca954a77788e5577deb88e025 179 SUPERFAMILY SSF50249 4 179 1.3E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD94_08390 e4cab0a1b6609425543473126b569a0d 276 SUPERFAMILY SSF55166 23 273 9.42E-92 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_08390 e4cab0a1b6609425543473126b569a0d 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 270 6.6E-90 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 BJD94_08390 e4cab0a1b6609425543473126b569a0d 276 Gene3D G3DSA:3.30.1380.10 22 275 4.0E-92 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_08390 e4cab0a1b6609425543473126b569a0d 276 PIRSF PIRSF018455 1 276 2.7E-111 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 SUPERFAMILY SSF55326 15 149 2.09E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 149 6.0E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 Gene3D G3DSA:3.30.1330.10 13 155 8.4E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 SUPERFAMILY SSF56042 153 311 2.69E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 Gene3D G3DSA:3.90.650.10 156 333 6.9E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 PIRSF PIRSF005303 8 332 5.7E-84 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 14 332 27.214 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 307 2.3E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain BJD94_07830 a06f63e9bc1ba2425b0c1df5da3b7078 334 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 15 332 1.9E-103 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:3.40.190.10 163 266 2.1E-15 T 14-10-2018 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 Pfam PF03466 LysR substrate binding domain 88 291 3.5E-26 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 SUPERFAMILY SSF53850 89 290 5.07E-25 T 14-10-2018 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:1.10.10.10 4 89 8.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 Gene3D G3DSA:3.40.190.10 91 280 2.1E-15 T 14-10-2018 BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 SUPERFAMILY SSF46785 2 110 2.39E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_18430 345445aef5ca9ac42b38f49c2f32f1b9 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_03870 86121ff77565a8cf5b1c54172e334514 154 Pfam PF11749 Protein of unknown function (DUF3305) 52 144 1.2E-22 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 BJD94_11000 54c697e1e0e1b5059acc3b7cbc465138 293 SMART SM00563 85 227 7.1E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_11000 54c697e1e0e1b5059acc3b7cbc465138 293 SUPERFAMILY SSF69593 20 289 3.14E-27 T 14-10-2018 BJD94_11000 54c697e1e0e1b5059acc3b7cbc465138 293 Pfam PF01553 Acyltransferase 73 226 1.7E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_21240 6885d9f3e2754a78201e6ea2bae12d1b 382 SUPERFAMILY SSF56796 3 380 3.4E-98 T 14-10-2018 BJD94_21240 6885d9f3e2754a78201e6ea2bae12d1b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 4.8E-82 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BJD94_21240 6885d9f3e2754a78201e6ea2bae12d1b 382 Gene3D G3DSA:1.20.1090.10 181 381 1.4E-37 T 14-10-2018 BJD94_21240 6885d9f3e2754a78201e6ea2bae12d1b 382 Gene3D G3DSA:3.40.50.1970 1 180 8.8E-49 T 14-10-2018 BJD94_04215 eba3d45870ea4f4f3532a85ad8246e53 230 SUPERFAMILY SSF52540 23 202 1.2E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04215 eba3d45870ea4f4f3532a85ad8246e53 230 Gene3D G3DSA:3.40.50.300 5 197 8.5E-21 T 14-10-2018 BJD94_13645 cf94e5abcf860c05958c00651f5e8c00 86 SUPERFAMILY SSF109910 2 79 6.15E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BJD94_13645 cf94e5abcf860c05958c00651f5e8c00 86 Gene3D G3DSA:1.10.150.250 1 86 5.4E-37 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BJD94_13645 cf94e5abcf860c05958c00651f5e8c00 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.4E-24 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 8.7E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 Gene3D G3DSA:1.10.3860.10 3 405 4.0E-71 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 SUPERFAMILY SSF118215 15 399 5.23E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.4 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 8.2E-13 T 14-10-2018 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 8.2E-13 T 14-10-2018 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 8.2E-13 T 14-10-2018 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 8.2E-13 T 14-10-2018 BJD94_18275 99b18dbb12983482c1aa610b55fd818d 406 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 8.2E-13 T 14-10-2018 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 SUPERFAMILY SSF53748 3 382 3.42E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.216 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 Pfam PF00162 Phosphoglycerate kinase 6 373 6.2E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 Gene3D G3DSA:3.40.50.1260 10 379 3.7E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 Gene3D G3DSA:3.40.50.1260 165 373 3.7E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_13560 b14558bc105b588f8ddf6ee46f3353be 386 PIRSF PIRSF000724 1 386 8.6E-134 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD94_15690 378323f90544d693082966e9d782dc7b 330 SUPERFAMILY SSF100950 70 320 1.09E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_15690 378323f90544d693082966e9d782dc7b 330 Pfam PF04198 Putative sugar-binding domain 66 320 5.8E-77 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BJD94_15690 378323f90544d693082966e9d782dc7b 330 Gene3D G3DSA:3.40.50.1360 60 325 2.4E-80 T 14-10-2018 BJD94_15690 378323f90544d693082966e9d782dc7b 330 Gene3D G3DSA:1.10.10.60 9 59 2.1E-18 T 14-10-2018 BJD94_01825 90609936f5f5d6b4bd7f8724e62bbc09 180 Pfam PF02600 Disulfide bond formation protein DsbB 22 170 1.6E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BJD94_01825 90609936f5f5d6b4bd7f8724e62bbc09 180 Gene3D G3DSA:1.20.1550.10 11 180 6.5E-59 T 14-10-2018 IPR023380 DsbB-like superfamily BJD94_01825 90609936f5f5d6b4bd7f8724e62bbc09 180 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 17 178 22.063 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB BJD94_01825 90609936f5f5d6b4bd7f8724e62bbc09 180 SUPERFAMILY SSF158442 25 171 7.98E-44 T 14-10-2018 IPR023380 DsbB-like superfamily BJD94_16275 ddaee0f789510bc0b614304a7ffa2f92 139 Pfam PF07883 Cupin domain 61 128 6.4E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel BJD94_16275 ddaee0f789510bc0b614304a7ffa2f92 139 SUPERFAMILY SSF51182 35 130 4.8E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD94_16275 ddaee0f789510bc0b614304a7ffa2f92 139 Gene3D G3DSA:2.60.120.10 33 136 4.1E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_06030 39de66a16ded32018025f3afedebb412 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 1.1E-64 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BJD94_06030 39de66a16ded32018025f3afedebb412 187 Pfam PF04279 Intracellular septation protein A 1 174 1.3E-68 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BJD94_06030 39de66a16ded32018025f3afedebb412 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.499 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BJD94_20685 742cba0bb883ec31022cde4baae0d558 442 SMART SM00327 166 434 4.7E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A BJD94_20685 742cba0bb883ec31022cde4baae0d558 442 SUPERFAMILY SSF53300 164 332 2.97E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_20685 742cba0bb883ec31022cde4baae0d558 442 Gene3D G3DSA:3.40.50.410 163 429 4.5E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.2E-29 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 SUPERFAMILY SSF55620 3 117 6.12E-37 T 14-10-2018 BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 Gene3D G3DSA:3.30.1130.10 1 118 7.3E-46 T 14-10-2018 BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 SMART SM00905 6 116 1.7E-48 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 1.5E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD94_09115 a8c4dba4229d4acbc2252b966b50eb01 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.9E-35 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Gene3D G3DSA:1.10.3720.10 279 521 1.0E-68 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 SUPERFAMILY SSF161098 271 512 1.7E-58 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 SUPERFAMILY SSF160964 24 269 6.41E-82 T 14-10-2018 BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Gene3D G3DSA:1.20.58.370 18 105 2.2E-33 T 14-10-2018 IPR035277 MalF, N-terminal BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 269 3.7E-55 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Gene3D G3DSA:3.10.650.10 108 277 1.4E-49 T 14-10-2018 BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Gene3D G3DSA:2.40.430.10 128 213 1.4E-49 T 14-10-2018 BJD94_19805 8b4ec8e58bd61be362405200dce45829 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 511 3.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_12300 32152826f40564b535412951b1a74da3 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 466 2.8E-81 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_12300 32152826f40564b535412951b1a74da3 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 466 1.9E-48 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 SUPERFAMILY SSF52540 1 208 9.45E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 Gene3D G3DSA:3.40.50.300 1 139 2.2E-49 T 14-10-2018 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 Gene3D G3DSA:1.10.8.60 142 212 1.1E-19 T 14-10-2018 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 328 1.8E-34 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 Gene3D G3DSA:1.20.272.10 213 338 1.2E-39 T 14-10-2018 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.7E-50 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 SUPERFAMILY SSF48019 211 332 2.89E-30 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD94_07615 13177c917f35c1d5b421049d00212c9c 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 330 1.3E-107 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 Gene3D G3DSA:2.30.110.10 13 211 2.2E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 SUPERFAMILY SSF50475 11 211 3.93E-66 T 14-10-2018 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 6.4E-90 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 PIRSF PIRSF000190 1 211 1.1E-81 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 2.5E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.9E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.908 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_17755 945bf8ca7c97c776d5cc0f61d4402b8f 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 Gene3D G3DSA:2.170.130.10 53 183 1.8E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 726 3.7E-116 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 172 6.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 Pfam PF00593 TonB dependent receptor 256 724 2.9E-59 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 SUPERFAMILY SSF56935 43 726 2.04E-134 T 14-10-2018 BJD94_18735 97e5bff6e99a8ef5b8c9f7d92903548c 726 Gene3D G3DSA:2.40.170.20 184 726 4.0E-131 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 PRINTS PR00108 Thymidylate synthase family signature 205 222 7.2E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 PRINTS PR00108 Thymidylate synthase family signature 38 59 7.2E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 PRINTS PR00108 Thymidylate synthase family signature 123 142 7.2E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 PRINTS PR00108 Thymidylate synthase family signature 167 193 7.2E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 30.857 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 SUPERFAMILY SSF55831 1 277 1.83E-88 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 ProSitePatterns PS00091 Thymidylate synthase active site. 134 162 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 1 277 8.3E-40 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 Gene3D G3DSA:3.30.572.10 1 277 4.9E-77 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_08590 a7994094101d17afb46a7c0eb242c452 277 Pfam PF00303 Thymidylate synthase 1 277 3.7E-71 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD94_20700 e4e1de2df37f3b54400da56c3b1ad71e 308 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 93 298 3.9E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_20700 e4e1de2df37f3b54400da56c3b1ad71e 308 Gene3D G3DSA:3.60.10.10 87 308 3.9E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_20700 e4e1de2df37f3b54400da56c3b1ad71e 308 SUPERFAMILY SSF56219 86 306 7.59E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 Gene3D G3DSA:3.30.70.270 229 412 8.1E-44 T 14-10-2018 BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 SMART SM00267 226 412 3.8E-34 T 14-10-2018 IPR000160 GGDEF domain BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 SUPERFAMILY SSF55073 243 410 2.59E-33 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 341 3.3E-22 T 14-10-2018 IPR000160 GGDEF domain BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 408 5.7E-6 T 14-10-2018 IPR000160 GGDEF domain BJD94_21585 76386df7d8f9bf3f86f6a8e74c803e5c 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 354 8.0E-23 T 14-10-2018 IPR000160 GGDEF domain BJD94_00930 22e2d779bd67ec88245284b32afd22a1 333 Pfam PF11059 Protein of unknown function (DUF2860) 33 332 6.4E-108 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 BJD94_00930 22e2d779bd67ec88245284b32afd22a1 333 PIRSF PIRSF028696 1 333 2.9E-138 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 BJD94_05630 b7c92f5513256d4b5d684fed9b1b43dc 465 Pfam PF00817 impB/mucB/samB family 16 146 2.6E-5 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD94_05630 b7c92f5513256d4b5d684fed9b1b43dc 465 SUPERFAMILY SSF56672 20 223 2.67E-26 T 14-10-2018 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-39 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 110 2.1E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_09855 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.8E-19 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 Gene3D G3DSA:1.10.3390.10 1 75 3.0E-31 T 14-10-2018 IPR023202 YejL-like superfamily BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.657 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 PIRSF PIRSF006188 1 72 6.7E-35 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 SUPERFAMILY SSF158651 1 75 3.66E-29 T 14-10-2018 IPR023202 YejL-like superfamily BJD94_06265 56f44c2ebe22186297fa086a8766fe58 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 3.0E-33 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 BJD94_16105 c3c7fe6f7f5b27ac3856691d669e0dcd 590 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 2.2E-248 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 BJD94_16105 c3c7fe6f7f5b27ac3856691d669e0dcd 590 Gene3D G3DSA:3.40.50.1820 229 517 5.1E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16105 c3c7fe6f7f5b27ac3856691d669e0dcd 590 SUPERFAMILY SSF53474 225 526 1.49E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_16105 c3c7fe6f7f5b27ac3856691d669e0dcd 590 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.2E-73 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 BJD94_15065 d0f27b35bce98dc6ccf84760af58faef 454 SUPERFAMILY SSF56219 32 450 3.24E-14 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_15065 d0f27b35bce98dc6ccf84760af58faef 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 38 445 7.0E-27 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 Gene3D G3DSA:1.20.1250.20 1 455 3.0E-131 T 14-10-2018 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 Pfam PF00854 POT family 228 405 4.3E-32 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 Pfam PF00854 POT family 85 197 1.7E-28 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 441 3.7E-47 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 2.9E-58 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BJD94_07095 c016ff4b358658a67d4c1baaa367df8a 462 SUPERFAMILY SSF103473 8 439 7.98E-42 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_04605 ac25e49204efc89a050b7cf8fcaa188d 434 Gene3D G3DSA:3.40.190.10 146 419 1.0E-113 T 14-10-2018 BJD94_04605 ac25e49204efc89a050b7cf8fcaa188d 434 Pfam PF13416 Bacterial extracellular solute-binding protein 45 367 4.7E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_04605 ac25e49204efc89a050b7cf8fcaa188d 434 Gene3D G3DSA:3.40.190.10 30 380 1.0E-113 T 14-10-2018 BJD94_04605 ac25e49204efc89a050b7cf8fcaa188d 434 SUPERFAMILY SSF53850 26 421 7.06E-68 T 14-10-2018 BJD94_04605 ac25e49204efc89a050b7cf8fcaa188d 434 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 BJD94_01285 101d7a5e720f32652e7d1d821270738c 332 Gene3D G3DSA:2.40.160.10 81 313 4.4E-13 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_01285 101d7a5e720f32652e7d1d821270738c 332 SUPERFAMILY SSF56935 40 331 1.55E-19 T 14-10-2018 BJD94_14780 e005de5352d0b5c44443ac9aae837fef 269 Gene3D G3DSA:3.40.50.720 5 269 1.9E-110 T 14-10-2018 BJD94_14780 e005de5352d0b5c44443ac9aae837fef 269 SUPERFAMILY SSF69572 9 267 1.7E-65 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD94_14780 e005de5352d0b5c44443ac9aae837fef 269 Pfam PF00899 ThiF family 23 265 3.7E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD94_21110 5989924ebacea9345c211b21dadd9b86 615 SUPERFAMILY SSF52540 99 253 1.08E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21110 5989924ebacea9345c211b21dadd9b86 615 Gene3D G3DSA:3.40.50.300 37 228 1.7E-14 T 14-10-2018 BJD94_21110 5989924ebacea9345c211b21dadd9b86 615 Pfam PF05729 NACHT domain 102 235 1.2E-7 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase BJD94_11515 b078eaca3598f37f1147afdaa8cb1245 296 Pfam PF00892 EamA-like transporter family 138 276 1.7E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_11515 b078eaca3598f37f1147afdaa8cb1245 296 SUPERFAMILY SSF103481 35 128 3.92E-5 T 14-10-2018 BJD94_11515 b078eaca3598f37f1147afdaa8cb1245 296 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 7.4E-74 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 BJD94_11515 b078eaca3598f37f1147afdaa8cb1245 296 SUPERFAMILY SSF103481 181 276 2.62E-5 T 14-10-2018 BJD94_05530 914750a2a00335500cedbfd4e8448450 400 Pfam PF13679 Methyltransferase domain 118 230 3.4E-17 T 14-10-2018 IPR025714 Methyltransferase domain BJD94_05530 914750a2a00335500cedbfd4e8448450 400 SUPERFAMILY SSF53335 105 192 8.66E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_04640 0b5edc42cae611b559f27c72de2a281a 99 Pfam PF04342 Putative member of DMT superfamily (DUF486) 1 94 2.2E-41 T 14-10-2018 IPR007437 Protein of unknown function DUF486 BJD94_04640 0b5edc42cae611b559f27c72de2a281a 99 PIRSF PIRSF021239 1 97 1.3E-49 T 14-10-2018 IPR007437 Protein of unknown function DUF486 BJD94_01880 1d3a4a30d753f8e8a38457d414b6e65a 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 7.7E-59 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 BJD94_20990 2bc9e07756e3a27bfa793be9f1efd9c3 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 2.8E-27 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF52172 3 126 4.41E-42 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00448 5 116 6.1E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:1.10.10.10 130 238 3.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:3.40.50.2300 1 125 4.9E-40 T 14-10-2018 BJD94_10385 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00862 156 232 8.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_17040 951574648e5b059e0039ff189ad74a52 132 Pfam PF13840 ACT domain 72 127 7.4E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain BJD94_17040 951574648e5b059e0039ff189ad74a52 132 Pfam PF10000 ACT domain 2 69 7.4E-27 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 BJD94_17040 951574648e5b059e0039ff189ad74a52 132 Gene3D G3DSA:3.30.2130.10 1 130 2.8E-47 T 14-10-2018 BJD94_17040 951574648e5b059e0039ff189ad74a52 132 SUPERFAMILY SSF55021 3 65 1.97E-19 T 14-10-2018 BJD94_17040 951574648e5b059e0039ff189ad74a52 132 SUPERFAMILY SSF55021 69 128 6.18E-19 T 14-10-2018 BJD94_05000 8a41283aec859755d13dfbc7a28086ec 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 2.8E-44 T 14-10-2018 IPR010791 AttH domain BJD94_05000 8a41283aec859755d13dfbc7a28086ec 374 Pfam PF17186 Lipocalin-like domain 252 374 4.0E-33 T 14-10-2018 BJD94_05000 8a41283aec859755d13dfbc7a28086ec 374 Gene3D G3DSA:2.40.370.10 252 374 1.9E-24 T 14-10-2018 IPR023374 AttH-like domain superfamily BJD94_05000 8a41283aec859755d13dfbc7a28086ec 374 SUPERFAMILY SSF159245 56 374 6.28E-94 T 14-10-2018 BJD94_05000 8a41283aec859755d13dfbc7a28086ec 374 Gene3D G3DSA:2.40.370.10 67 251 4.1E-52 T 14-10-2018 IPR023374 AttH-like domain superfamily BJD94_02520 990c2f59919b93849cac68c8956ac61d 237 SUPERFAMILY SSF55811 2 156 2.34E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_02520 990c2f59919b93849cac68c8956ac61d 237 Gene3D G3DSA:3.90.79.10 3 158 2.2E-23 T 14-10-2018 BJD94_04735 65cacdba661429e8e01979665d6e90e3 170 Pfam PF01863 Protein of unknown function DUF45 94 150 6.5E-10 T 14-10-2018 IPR002725 Protein of unknown function DUF45 BJD94_04735 65cacdba661429e8e01979665d6e90e3 170 Gene3D G3DSA:3.30.2010.10 75 163 7.3E-6 T 14-10-2018 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Gene3D G3DSA:2.160.10.10 100 308 1.7E-63 T 14-10-2018 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.102 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 0.0029 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 3.5E-10 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Gene3D G3DSA:3.40.1390.10 1 99 2.2E-31 T 14-10-2018 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 SUPERFAMILY SSF51161 32 316 1.84E-83 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.0E-115 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_00285 0b9ff6c633723a41dcca0949365c5019 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 4.7E-22 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 BJD94_13255 3a614e63a659c56a99d5d72e389a39f0 149 SUPERFAMILY SSF102400 1 146 1.7E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BJD94_13255 3a614e63a659c56a99d5d72e389a39f0 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 1.1E-31 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BJD94_13255 3a614e63a659c56a99d5d72e389a39f0 149 Gene3D G3DSA:3.40.50.10110 1 146 1.5E-40 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BJD94_06235 3fb35dc0196c3a8196db92677e3f7a0d 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_06235 3fb35dc0196c3a8196db92677e3f7a0d 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_06235 3fb35dc0196c3a8196db92677e3f7a0d 173 SUPERFAMILY SSF54523 8 140 1.26E-14 T 14-10-2018 BJD94_06235 3fb35dc0196c3a8196db92677e3f7a0d 173 Gene3D G3DSA:3.30.700.10 8 150 4.6E-14 T 14-10-2018 BJD94_06235 3fb35dc0196c3a8196db92677e3f7a0d 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_17945 3b890beec2016db7e75acab05ea059cd 119 SUPERFAMILY SSF52172 1 119 2.56E-38 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_17945 3b890beec2016db7e75acab05ea059cd 119 SMART SM00448 2 115 3.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17945 3b890beec2016db7e75acab05ea059cd 119 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_17945 3b890beec2016db7e75acab05ea059cd 119 Gene3D G3DSA:3.40.50.12740 2 119 2.2E-38 T 14-10-2018 BJD94_06980 4e40f88986ebad73401cd567c031c963 114 SUPERFAMILY SSF81343 4 113 9.65E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06980 4e40f88986ebad73401cd567c031c963 114 PIRSF PIRSF000169 1 114 7.7E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BJD94_06980 4e40f88986ebad73401cd567c031c963 114 Gene3D G3DSA:1.20.1300.10 1 114 1.0E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD94_06980 4e40f88986ebad73401cd567c031c963 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 7.1E-34 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Pfam PF02913 FAD linked oxidases, C-terminal domain 274 520 3.8E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 SUPERFAMILY SSF55103 275 527 3.43E-56 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Pfam PF13183 4Fe-4S dicluster domain 544 616 1.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Pfam PF02754 Cysteine-rich domain 714 785 0.03 T 14-10-2018 IPR004017 Cysteine-rich domain BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 SUPERFAMILY SSF56176 12 268 5.72E-55 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Gene3D G3DSA:3.30.43.10 2 96 7.8E-9 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Gene3D G3DSA:3.30.70.2740 398 481 4.2E-8 T 14-10-2018 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Pfam PF01565 FAD binding domain 47 183 5.3E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Gene3D G3DSA:1.10.1060.10 521 638 5.8E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 SUPERFAMILY SSF46548 507 631 3.66E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD94_16465 e5b7fc29a0f00f12030a5f7e2398bd44 945 Gene3D G3DSA:1.10.45.10 486 520 7.2E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BJD94_06735 b3c2f3371417d05b82f768f71c686670 185 Pfam PF04279 Intracellular septation protein A 16 162 7.2E-7 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 BJD94_15125 cea89a378ae29822d89971815fc00e4a 322 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 307 1.1E-58 T 14-10-2018 IPR010732 Type VI secretion, TssG-like BJD94_15125 cea89a378ae29822d89971815fc00e4a 322 Pfam PF06996 Type VI secretion, TssG 12 307 6.1E-65 T 14-10-2018 IPR010732 Type VI secretion, TssG-like BJD94_05135 750caa9ddcd0de18751058014d49018d 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 2.7E-24 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05135 750caa9ddcd0de18751058014d49018d 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 2.7E-105 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like BJD94_05135 750caa9ddcd0de18751058014d49018d 231 SUPERFAMILY SSF55120 2 197 1.28E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05135 750caa9ddcd0de18751058014d49018d 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_05135 750caa9ddcd0de18751058014d49018d 231 Gene3D G3DSA:3.30.2350.10 1 196 2.3E-46 T 14-10-2018 BJD94_00775 5cc116b244a2c1cd24a97e72f398a994 440 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 440 2.5E-122 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_00775 5cc116b244a2c1cd24a97e72f398a994 440 SUPERFAMILY SSF56935 27 440 3.62E-91 T 14-10-2018 BJD94_00775 5cc116b244a2c1cd24a97e72f398a994 440 Gene3D G3DSA:2.40.160.60 27 440 1.1E-117 T 14-10-2018 BJD94_02535 54132fc9abcd689c372a651cb04960dc 258 SUPERFAMILY SSF81301 64 221 1.44E-16 T 14-10-2018 BJD94_02535 54132fc9abcd689c372a651cb04960dc 258 Gene3D G3DSA:3.30.460.10 73 195 7.8E-6 T 14-10-2018 BJD94_01485 fc5c73e71a2f45f880a326d883730dcf 528 PIRSF PIRSF006446 349 526 2.8E-32 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD94_01485 fc5c73e71a2f45f880a326d883730dcf 528 PIRSF PIRSF006446 1 330 1.2E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD94_01485 fc5c73e71a2f45f880a326d883730dcf 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.7E-177 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD94_14210 4e16c5f5c6463352e1e5e3faa16ff5d6 348 Pfam PF01594 AI-2E family transporter 2 334 9.9E-53 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like BJD94_08990 b6f736e2b46edfae7540d6397f46b3a5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BJD94_08990 b6f736e2b46edfae7540d6397f46b3a5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.3E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BJD94_08990 b6f736e2b46edfae7540d6397f46b3a5 130 SUPERFAMILY SSF54211 5 130 7.97E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD94_08990 b6f736e2b46edfae7540d6397f46b3a5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.501 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BJD94_08990 b6f736e2b46edfae7540d6397f46b3a5 130 Gene3D G3DSA:3.30.230.10 1 130 6.7E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD94_04885 cc47000e38742c64e3da2311afcbccd2 414 SUPERFAMILY SSF53383 5 410 5.17E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_04885 cc47000e38742c64e3da2311afcbccd2 414 Pfam PF00266 Aminotransferase class-V 26 401 2.0E-70 T 14-10-2018 IPR000192 Aminotransferase class V domain BJD94_04885 cc47000e38742c64e3da2311afcbccd2 414 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 5 404 2.4E-163 T 14-10-2018 IPR011340 Cysteine desulfurase-related BJD94_04885 cc47000e38742c64e3da2311afcbccd2 414 Gene3D G3DSA:3.40.640.10 33 289 1.0E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_04885 cc47000e38742c64e3da2311afcbccd2 414 Gene3D G3DSA:3.90.1150.10 24 405 1.0E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_21525 c72ea888bee1226e22059c5c82193c68 191 SUPERFAMILY SSF110997 101 164 9.15E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_21525 c72ea888bee1226e22059c5c82193c68 191 Gene3D G3DSA:3.30.70.1070 88 182 3.1E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_21525 c72ea888bee1226e22059c5c82193c68 191 Pfam PF05036 Sporulation related domain 101 173 3.0E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 3.3E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Gene3D G3DSA:1.10.540.10 1 117 3.3E-31 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 PIRSF PIRSF016578 219 382 5.0E-15 T 14-10-2018 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 PIRSF PIRSF016578 3 192 2.2E-12 T 14-10-2018 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 SUPERFAMILY SSF56645 1 240 6.41E-78 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 SUPERFAMILY SSF47203 225 379 1.61E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Gene3D G3DSA:1.20.140.10 233 383 6.0E-57 T 14-10-2018 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Gene3D G3DSA:2.40.110.10 121 232 5.5E-43 T 14-10-2018 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.8E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD94_15420 c54983f26948d8694655c2bcd2dd6a3b 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.2E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD94_12110 6b5eb49ef223c26e7da3ca64bf90f315 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.7E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted BJD94_12110 6b5eb49ef223c26e7da3ca64bf90f315 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.4E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted BJD94_17700 59bb1d18f841da26d202194b7896e437 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 387 6.8E-122 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BJD94_17700 59bb1d18f841da26d202194b7896e437 388 Gene3D G3DSA:3.90.1150.10 12 383 1.4E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_17700 59bb1d18f841da26d202194b7896e437 388 SUPERFAMILY SSF53383 2 387 1.93E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_17700 59bb1d18f841da26d202194b7896e437 388 Pfam PF00155 Aminotransferase class I and II 36 383 2.6E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_17700 59bb1d18f841da26d202194b7896e437 388 Gene3D G3DSA:3.40.640.10 69 292 1.4E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Gene3D G3DSA:2.40.10.410 291 377 9.8E-37 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Gene3D G3DSA:3.40.50.10610 114 290 1.6E-54 T 14-10-2018 BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 7.3E-44 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 6.1E-28 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Gene3D G3DSA:3.30.1660.40 24 113 5.1E-35 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily BJD94_07345 d4909869e8114a8107530f1df86a8085 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 2.5E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 315 328 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 SUPERFAMILY SSF53383 142 517 4.17E-45 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 Gene3D G3DSA:1.10.20.110 42 407 2.4E-199 T 14-10-2018 BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 Pfam PF00155 Aminotransferase class I and II 178 512 1.7E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 Gene3D G3DSA:3.90.1150.10 35 527 2.4E-199 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 Gene3D G3DSA:3.40.640.10 166 385 2.4E-199 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_16955 ce799c979d84aaace43d7fc2edfe363a 531 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 16 529 3.1E-220 T 14-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD94_05340 2fde7f0e1e590918026354d90552c2af 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.3E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_05340 2fde7f0e1e590918026354d90552c2af 243 SUPERFAMILY SSF56300 1 224 2.15E-33 T 14-10-2018 BJD94_05340 2fde7f0e1e590918026354d90552c2af 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 121.978 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BJD94_05340 2fde7f0e1e590918026354d90552c2af 243 Gene3D G3DSA:3.60.21.10 1 235 3.7E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_05340 2fde7f0e1e590918026354d90552c2af 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 5.6E-104 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BJD94_09215 979e25a8e87e622a5e523da17dced834 113 PIRSF PIRSF031804 1 113 2.9E-42 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 BJD94_09215 979e25a8e87e622a5e523da17dced834 113 Pfam PF06803 Protein of unknown function (DUF1232) 50 85 3.4E-13 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 BJD94_19905 611760707e1014813444ccc2ba98a512 261 Gene3D G3DSA:3.40.50.300 1 253 1.3E-59 T 14-10-2018 BJD94_19905 611760707e1014813444ccc2ba98a512 261 SUPERFAMILY SSF52540 10 237 1.39E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19905 611760707e1014813444ccc2ba98a512 261 Pfam PF00005 ABC transporter 22 171 1.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_19905 611760707e1014813444ccc2ba98a512 261 SMART SM00382 31 220 2.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_19285 5d63f9624e66b93fda9d29fb33d1bad7 146 SUPERFAMILY SSF55961 2 145 4.05E-22 T 14-10-2018 BJD94_19285 5d63f9624e66b93fda9d29fb33d1bad7 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 143 1.9E-8 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like BJD94_19285 5d63f9624e66b93fda9d29fb33d1bad7 146 Gene3D G3DSA:3.30.530.20 1 146 2.5E-20 T 14-10-2018 IPR023393 START-like domain superfamily BJD94_21610 70d5a3928ae73941514e8df3271039c7 304 Pfam PF00892 EamA-like transporter family 139 275 6.0E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_21610 70d5a3928ae73941514e8df3271039c7 304 Pfam PF00892 EamA-like transporter family 3 119 2.8E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_01845 9d1cf1ade1daa7a76ba9c8de42f43021 420 Gene3D G3DSA:1.20.1420.20 18 403 6.4E-85 T 14-10-2018 IPR038352 Imelysin-like domain superfamily BJD94_01845 9d1cf1ade1daa7a76ba9c8de42f43021 420 Pfam PF09375 Imelysin 40 398 1.5E-98 T 14-10-2018 IPR018976 Imelysin-like domain BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 SUPERFAMILY SSF50814 4 170 1.22E-52 T 14-10-2018 IPR012674 Calycin BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 29 43 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 99 113 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 159 169 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 46 62 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 132 143 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PRINTS PR01171 Bacterial lipocalin signature 65 74 1.6E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 PIRSF PIRSF036893 1 171 2.0E-45 T 14-10-2018 IPR022271 Lipocalin, ApoD type BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 Gene3D G3DSA:2.40.128.20 8 171 4.5E-53 T 14-10-2018 IPR012674 Calycin BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 Pfam PF08212 Lipocalin-like domain 30 170 4.9E-42 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BJD94_19400 6887fc76efd1eda5f3ee6cee79b9eea6 171 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 14-10-2018 IPR022272 Lipocalin family conserved site BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 Gene3D G3DSA:3.40.50.300 1 196 9.3E-43 T 14-10-2018 BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 SMART SM00382 26 205 2.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 SUPERFAMILY SSF52540 2 193 1.82E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 2.1E-78 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 BJD94_00720 347ae0ae766a41059e3223ee6bcad9e0 205 Pfam PF00005 ABC transporter 18 158 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_21125 0023990453c09341fbc8f3bf820af867 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.7E-51 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BJD94_21125 0023990453c09341fbc8f3bf820af867 126 SUPERFAMILY SSF51230 3 125 9.16E-45 T 14-10-2018 IPR011053 Single hybrid motif BJD94_21125 0023990453c09341fbc8f3bf820af867 126 Pfam PF01597 Glycine cleavage H-protein 5 125 4.4E-50 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BJD94_21125 0023990453c09341fbc8f3bf820af867 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.518 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BJD94_21125 0023990453c09341fbc8f3bf820af867 126 Gene3D G3DSA:2.40.50.100 1 126 7.7E-51 T 14-10-2018 BJD94_13615 451fbf2b00036334f59832a74f0a8147 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 179 2.2E-35 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD94_13615 451fbf2b00036334f59832a74f0a8147 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 23 169 1.3E-10 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD94_13615 451fbf2b00036334f59832a74f0a8147 191 Gene3D G3DSA:1.20.120.740 3 191 1.7E-49 T 14-10-2018 BJD94_13615 451fbf2b00036334f59832a74f0a8147 191 SUPERFAMILY SSF101327 6 178 6.41E-47 T 14-10-2018 IPR036255 YgfB-like superfamily BJD94_13615 451fbf2b00036334f59832a74f0a8147 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.62 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD94_18565 634716cdfcabfe69d82aa62f6ab962ab 533 Pfam PF00722 Glycosyl hydrolases family 16 94 274 2.0E-23 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 BJD94_18565 634716cdfcabfe69d82aa62f6ab962ab 533 SUPERFAMILY SSF49785 377 532 7.37E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_18565 634716cdfcabfe69d82aa62f6ab962ab 533 Gene3D G3DSA:2.60.120.200 51 344 7.3E-90 T 14-10-2018 BJD94_18565 634716cdfcabfe69d82aa62f6ab962ab 533 SUPERFAMILY SSF49899 50 337 1.05E-80 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD94_20945 2d3638166804ce8277fb24865d765e16 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 2.7E-93 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD94_20945 2d3638166804ce8277fb24865d765e16 365 Gene3D G3DSA:3.20.20.70 1 365 2.8E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_20945 2d3638166804ce8277fb24865d765e16 365 SUPERFAMILY SSF51395 3 364 1.86E-126 T 14-10-2018 BJD94_18465 e9209aada5e08f1c0cc07e577a4df23f 199 Pfam PF12261 Thermostable hemolysin 15 184 4.5E-61 T 14-10-2018 IPR022050 Thermostable hemolysin BJD94_00515 b9759eccb2e30483fc7895a5988119df 110 Pfam PF13698 Domain of unknown function (DUF4156) 30 109 3.4E-23 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 BJD94_17045 8bcc2eea22e7675a52a248ae73c0a259 198 Pfam PF00924 Mechanosensitive ion channel 78 174 1.4E-9 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_17045 8bcc2eea22e7675a52a248ae73c0a259 198 Gene3D G3DSA:2.30.30.60 124 175 1.0E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_17045 8bcc2eea22e7675a52a248ae73c0a259 198 SUPERFAMILY SSF50182 109 175 3.92E-11 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_07860 9156c985172a1bb387f0d9b59ac46ca2 149 Pfam PF03477 ATP cone domain 50 136 2.3E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BJD94_07860 9156c985172a1bb387f0d9b59ac46ca2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.763 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BJD94_07860 9156c985172a1bb387f0d9b59ac46ca2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.1E-73 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BJD94_16665 ecc1af48c48bc0e945cf4915ca851162 80 Pfam PF00550 Phosphopantetheine attachment site 10 68 1.8E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD94_16665 ecc1af48c48bc0e945cf4915ca851162 80 Gene3D G3DSA:1.10.1200.10 4 77 1.4E-21 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_16665 ecc1af48c48bc0e945cf4915ca851162 80 SUPERFAMILY SSF47336 10 75 1.57E-12 T 14-10-2018 IPR036736 ACP-like superfamily BJD94_16665 ecc1af48c48bc0e945cf4915ca851162 80 ProSitePatterns PS00012 Phosphopantetheine attachment site. 33 48 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site BJD94_10770 1ed25c4c689a4ada48eaaeb81698ac65 223 PIRSF PIRSF006324 1 214 1.3E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_10770 1ed25c4c689a4ada48eaaeb81698ac65 223 Pfam PF01810 LysE type translocator 16 212 1.8E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_21685 aba6038e51b3075a5c8aa3e01a4ebbab 140 Pfam PF04143 Sulphur transport 3 126 5.5E-11 T 14-10-2018 IPR007272 Sulphur transport domain BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 Pfam PF03466 LysR substrate binding domain 93 294 7.5E-25 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 Gene3D G3DSA:3.40.190.10 103 294 1.2E-46 T 14-10-2018 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 SUPERFAMILY SSF46785 9 113 1.02E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 Gene3D G3DSA:1.10.10.10 6 99 2.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 SUPERFAMILY SSF53850 94 299 6.52E-26 T 14-10-2018 BJD94_08105 16ce9afb683735ea4a3c35e91f330eb5 300 Gene3D G3DSA:3.40.190.10 163 271 1.2E-46 T 14-10-2018 BJD94_03395 e7a313a728de4121adb4c8160452dc27 80 SUPERFAMILY SSF143120 1 76 2.22E-15 T 14-10-2018 IPR036165 YefM-like superfamily BJD94_03395 e7a313a728de4121adb4c8160452dc27 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 53 1.5E-14 T 14-10-2018 BJD94_03395 e7a313a728de4121adb4c8160452dc27 80 Gene3D G3DSA:3.40.1620.10 1 49 2.7E-7 T 14-10-2018 BJD94_03395 e7a313a728de4121adb4c8160452dc27 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 63 7.3E-12 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD94_19900 ff127cc68a2e45534f5bceebb60fcd03 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_19900 ff127cc68a2e45534f5bceebb60fcd03 153 SUPERFAMILY SSF46689 1 74 1.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_19900 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.20.5.830 111 153 2.3E-23 T 14-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily BJD94_19900 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 14-10-2018 BJD94_19900 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.287.790 61 110 5.2E-28 T 14-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 75 172 2.8E-20 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 PIRSF PIRSF026760 36 387 3.5E-156 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 Gene3D G3DSA:3.40.50.300 175 383 1.6E-66 T 14-10-2018 BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 SUPERFAMILY SSF52540 32 383 6.15E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 183 372 5.6E-60 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop BJD94_06400 18b36d0f2c677d68fe813c90d2a3cc5d 394 Gene3D G3DSA:3.40.50.720 28 174 3.0E-47 T 14-10-2018 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 Pfam PF13377 Periplasmic binding protein-like domain 168 314 9.3E-29 T 14-10-2018 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 SUPERFAMILY SSF53822 61 315 4.71E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 Gene3D G3DSA:3.40.50.2300 55 306 1.2E-64 T 14-10-2018 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 Gene3D G3DSA:1.10.260.40 1 54 2.6E-21 T 14-10-2018 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 SMART SM00354 1 71 2.5E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 Gene3D G3DSA:3.40.50.2300 160 289 1.2E-64 T 14-10-2018 BJD94_13315 88e62a714553e0d27aa3233d3653eb2f 331 SUPERFAMILY SSF47413 2 59 2.28E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 Gene3D G3DSA:1.50.10.10 305 783 6.6E-256 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 Gene3D G3DSA:3.30.1390.40 484 515 6.6E-256 T 14-10-2018 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 Gene3D G3DSA:2.70.98.50 28 259 1.4E-97 T 14-10-2018 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 Pfam PF01204 Trehalase 577 765 1.3E-9 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 Gene3D G3DSA:1.10.287.100 260 298 2.5E-21 T 14-10-2018 BJD94_14605 4e2e96da799125cec3a96068e035d3fc 787 SUPERFAMILY SSF48208 276 782 7.94E-84 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD94_19925 a364ae96c505aefa955c1dafcb09db24 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.9E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_09275 be60fb4b502bc20d843bd567e8501fca 111 SMART SM00530 27 82 2.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_09275 be60fb4b502bc20d843bd567e8501fca 111 Pfam PF01381 Helix-turn-helix 28 81 1.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD94_09275 be60fb4b502bc20d843bd567e8501fca 111 Gene3D G3DSA:1.10.260.40 14 86 1.6E-13 T 14-10-2018 BJD94_09275 be60fb4b502bc20d843bd567e8501fca 111 SUPERFAMILY SSF47413 17 80 3.85E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_10970 09feb89864a1e2fe5064d2ad7ade7703 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.7E-66 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BJD94_10970 09feb89864a1e2fe5064d2ad7ade7703 214 Pfam PF03006 Haemolysin-III related 7 204 8.2E-38 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BJD94_13025 ca38e6ff6b1bae8ed47124eab3ab6f82 587 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 576 5.4E-64 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal BJD94_13025 ca38e6ff6b1bae8ed47124eab3ab6f82 587 Pfam PF15864 Protein glycosylation ligase 174 199 2.5E-11 T 14-10-2018 IPR031726 Protein glycosylation ligase domain BJD94_13025 ca38e6ff6b1bae8ed47124eab3ab6f82 587 Pfam PF04932 O-Antigen ligase 221 366 8.2E-15 T 14-10-2018 IPR007016 O-antigen ligase-related BJD94_06070 4b3c1542d63169b8a4bf145f193d27e2 306 Gene3D G3DSA:1.10.3720.10 85 301 1.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_06070 4b3c1542d63169b8a4bf145f193d27e2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_06070 4b3c1542d63169b8a4bf145f193d27e2 306 SUPERFAMILY SSF161098 89 291 6.0E-21 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18000 62549950b5c09804f71010c280af9425 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 1.1E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_18000 62549950b5c09804f71010c280af9425 251 SUPERFAMILY SSF53850 22 250 9.34E-23 T 14-10-2018 BJD94_18000 62549950b5c09804f71010c280af9425 251 Gene3D G3DSA:3.40.190.10 33 250 1.3E-14 T 14-10-2018 BJD94_18000 62549950b5c09804f71010c280af9425 251 Gene3D G3DSA:3.40.190.10 111 212 1.3E-14 T 14-10-2018 BJD94_14530 9209047f9a61befa52c66114899ac690 448 Gene3D G3DSA:3.40.50.300 148 358 3.9E-11 T 14-10-2018 BJD94_14530 9209047f9a61befa52c66114899ac690 448 SUPERFAMILY SSF52540 152 436 1.22E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_06190 d0280607d8b5cccd798a6172dc52ce37 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 2.6E-6 T 14-10-2018 BJD94_06190 d0280607d8b5cccd798a6172dc52ce37 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.6E-6 T 14-10-2018 BJD94_06190 d0280607d8b5cccd798a6172dc52ce37 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.1E-35 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal BJD94_06190 d0280607d8b5cccd798a6172dc52ce37 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.2E-76 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BJD94_01075 13b3f00f7c59a1525ca52d49efbc30ac 468 SUPERFAMILY SSF48452 124 265 1.08E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_16635 c72c9af57770ffa46bd15aba2b8484be 393 SUPERFAMILY SSF56322 20 385 2.62E-86 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_16635 c72c9af57770ffa46bd15aba2b8484be 393 Gene3D G3DSA:3.60.120.10 3 391 1.6E-114 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_16635 c72c9af57770ffa46bd15aba2b8484be 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 101 382 4.1E-85 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BJD94_16635 c72c9af57770ffa46bd15aba2b8484be 393 Pfam PF00425 chorismate binding enzyme 121 375 2.9E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD94_20535 ce1522501481e4ae4babe2723dbd17d2 145 Pfam PF06127 Protein of unknown function (DUF962) 1 141 8.0E-22 T 14-10-2018 IPR009305 Protein of unknown function DUF962 BJD94_00505 4f38dce767a9d2e59bf92a21512594f5 115 Pfam PF03960 ArsC family 6 113 1.9E-19 T 14-10-2018 IPR006660 Arsenate reductase-like BJD94_00505 4f38dce767a9d2e59bf92a21512594f5 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 8.9E-32 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BJD94_00505 4f38dce767a9d2e59bf92a21512594f5 115 SUPERFAMILY SSF52833 2 114 8.96E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_00505 4f38dce767a9d2e59bf92a21512594f5 115 Gene3D G3DSA:3.40.30.10 2 115 1.3E-42 T 14-10-2018 BJD94_05090 9da63d319e512d64076ac6bbc8f641f4 148 Pfam PF03724 META domain 34 141 1.8E-26 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ BJD94_05090 9da63d319e512d64076ac6bbc8f641f4 148 Gene3D G3DSA:2.40.128.270 40 143 1.8E-30 T 14-10-2018 IPR038670 HslJ-like superfamily BJD94_00405 9893f94b78209468f7797bbb410d013a 191 SUPERFAMILY SSF53697 1 189 1.48E-52 T 14-10-2018 BJD94_00405 9893f94b78209468f7797bbb410d013a 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.794 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BJD94_00405 9893f94b78209468f7797bbb410d013a 191 Gene3D G3DSA:3.40.50.10490 1 191 5.1E-72 T 14-10-2018 BJD94_00405 9893f94b78209468f7797bbb410d013a 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.9E-82 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 BJD94_00405 9893f94b78209468f7797bbb410d013a 191 Pfam PF13580 SIS domain 25 146 1.2E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 4.9E-258 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 563 1.9E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 4.5E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 SUPERFAMILY SSF161098 30 284 6.76E-43 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 Gene3D G3DSA:1.10.3720.10 28 291 1.5E-48 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 Gene3D G3DSA:1.10.3720.10 310 564 6.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20200 e25f83c799cff9b83637b29a164f5993 574 SUPERFAMILY SSF161098 308 558 4.19E-31 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_17090 790d76ba897eac2d721433aadbc19403 133 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_17090 790d76ba897eac2d721433aadbc19403 133 Pfam PF00293 NUDIX domain 5 113 2.7E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_17090 790d76ba897eac2d721433aadbc19403 133 Gene3D G3DSA:3.90.79.10 4 130 6.1E-22 T 14-10-2018 BJD94_17090 790d76ba897eac2d721433aadbc19403 133 SUPERFAMILY SSF55811 3 128 1.25E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_09500 1b1841fe830fa726a3debcf3cb6ee39a 219 Pfam PF05494 MlaC protein 41 206 1.9E-46 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BJD94_09500 1b1841fe830fa726a3debcf3cb6ee39a 219 PIRSF PIRSF004649 8 219 4.5E-55 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BJD94_09500 1b1841fe830fa726a3debcf3cb6ee39a 219 Gene3D G3DSA:3.10.450.710 33 211 3.1E-38 T 14-10-2018 BJD94_15230 7111c771d81bb57da9ca0fc5e1af9fd9 114 Pfam PF08888 HopJ type III effector protein 4 111 7.2E-50 T 14-10-2018 IPR014984 HopJ type III effector protein BJD94_15230 7111c771d81bb57da9ca0fc5e1af9fd9 114 Gene3D G3DSA:3.20.160.10 1 114 7.4E-51 T 14-10-2018 IPR038604 Type III effector HopJ superfamily BJD94_21665 7100c3efee8e8aa5ea4866640a38724a 303 Gene3D G3DSA:3.60.10.10 20 293 2.4E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_21665 7100c3efee8e8aa5ea4866640a38724a 303 SUPERFAMILY SSF56219 23 297 7.72E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_21665 7100c3efee8e8aa5ea4866640a38724a 303 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 287 7.0E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 Gene3D G3DSA:3.40.50.2300 79 318 5.2E-44 T 14-10-2018 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 Gene3D G3DSA:1.10.260.40 1 58 1.1E-17 T 14-10-2018 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 SMART SM00354 1 66 1.4E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 Gene3D G3DSA:3.40.50.2300 158 320 5.2E-44 T 14-10-2018 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 Pfam PF13377 Periplasmic binding protein-like domain 167 326 1.8E-32 T 14-10-2018 BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 SUPERFAMILY SSF53822 76 320 3.93E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_14635 149ba7553920a38212cd8d3e7a3f4394 335 SUPERFAMILY SSF47413 3 52 4.41E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_02260 d85bdd261fb605737e288d6ec41da2e0 159 Gene3D G3DSA:3.40.630.30 1 148 3.0E-23 T 14-10-2018 BJD94_02260 d85bdd261fb605737e288d6ec41da2e0 159 SUPERFAMILY SSF55729 4 138 3.01E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_02260 d85bdd261fb605737e288d6ec41da2e0 159 Pfam PF13302 Acetyltransferase (GNAT) domain 20 126 7.4E-15 T 14-10-2018 IPR000182 GNAT domain BJD94_15630 fadc0be61695b2717c228227576d3de7 136 SUPERFAMILY SSF47413 2 61 2.29E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_15630 fadc0be61695b2717c228227576d3de7 136 Gene3D G3DSA:1.10.260.40 2 66 3.8E-5 T 14-10-2018 BJD94_11690 14eade16a2557e1d22d550e742ffc90c 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.6E-18 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 BJD94_15915 37bb408253199866d205ba725beb9862 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_15915 37bb408253199866d205ba725beb9862 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_15915 37bb408253199866d205ba725beb9862 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_15915 37bb408253199866d205ba725beb9862 365 Pfam PF12698 ABC-2 family transporter protein 25 356 6.2E-50 T 14-10-2018 BJD94_12730 7c359da49e61dee949c7a91d1ab2e5a8 203 Gene3D G3DSA:1.10.10.10 25 113 8.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12730 7c359da49e61dee949c7a91d1ab2e5a8 203 Pfam PF03551 Transcriptional regulator PadR-like family 31 104 1.4E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal BJD94_12730 7c359da49e61dee949c7a91d1ab2e5a8 203 SUPERFAMILY SSF46785 27 200 1.02E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_12730 7c359da49e61dee949c7a91d1ab2e5a8 203 Pfam PF10400 Virulence activator alpha C-term 116 200 1.9E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal BJD94_19130 771061b76137e7eb7ea9ca6634bb0e1d 179 Pfam PF00857 Isochorismatase family 7 149 2.9E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 BJD94_19130 771061b76137e7eb7ea9ca6634bb0e1d 179 SUPERFAMILY SSF52499 1 179 1.44E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_19130 771061b76137e7eb7ea9ca6634bb0e1d 179 Gene3D G3DSA:3.40.50.850 1 179 2.1E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 Pfam PF01061 ABC-2 type transporter 8 218 1.0E-38 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 PIRSF PIRSF006648 7 253 2.5E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 9.4E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 9.4E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 9.4E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_14045 1688b47dfe2302ad7b975df6e3aab5eb 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 9.4E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD94_07685 85d52af78aae909b5ac6aae34d7d14e8 179 SUPERFAMILY SSF54523 8 58 9.42E-12 T 14-10-2018 BJD94_07685 85d52af78aae909b5ac6aae34d7d14e8 179 Gene3D G3DSA:3.30.700.10 7 166 7.7E-11 T 14-10-2018 BJD94_07685 85d52af78aae909b5ac6aae34d7d14e8 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 9.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_07685 85d52af78aae909b5ac6aae34d7d14e8 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_01900 b631fccb6f41b2b3fc6e36af7306f889 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.6E-100 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BJD94_01900 b631fccb6f41b2b3fc6e36af7306f889 428 PIRSF PIRSF006066 1 427 4.9E-75 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD94_01900 b631fccb6f41b2b3fc6e36af7306f889 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 8.0E-108 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 5.4E-36 T 14-10-2018 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 194 6.4E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.187 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 SUPERFAMILY SSF56784 5 224 4.2E-60 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 Gene3D G3DSA:1.10.150.240 21 94 4.1E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 193 8.2E-14 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 1.6E-59 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD94_12460 b538e9616fb61d92995a94f2fb16a323 228 Gene3D G3DSA:3.40.50.1000 9 216 4.1E-64 T 14-10-2018 IPR023214 HAD superfamily BJD94_15850 0076f1712c7956daa98614a2a100c831 397 Pfam PF07690 Major Facilitator Superfamily 21 351 1.3E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_15850 0076f1712c7956daa98614a2a100c831 397 SUPERFAMILY SSF103473 4 384 3.4E-57 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_15850 0076f1712c7956daa98614a2a100c831 397 Gene3D G3DSA:1.20.1720.10 10 385 3.4E-83 T 14-10-2018 BJD94_04185 d75a172462ac13e0bb101911224650a1 160 Gene3D G3DSA:3.30.70.990 9 94 4.9E-27 T 14-10-2018 IPR035570 UPF0234, N-terminal BJD94_04185 d75a172462ac13e0bb101911224650a1 160 Gene3D G3DSA:3.30.70.860 95 160 1.7E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal BJD94_04185 d75a172462ac13e0bb101911224650a1 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.247 T 14-10-2018 IPR007551 Protein of unknown function DUF520 BJD94_04185 d75a172462ac13e0bb101911224650a1 160 SUPERFAMILY SSF89963 2 85 2.88E-29 T 14-10-2018 IPR036183 YajQ-like superfamily BJD94_04185 d75a172462ac13e0bb101911224650a1 160 SUPERFAMILY SSF89963 88 160 1.07E-28 T 14-10-2018 IPR036183 YajQ-like superfamily BJD94_04185 d75a172462ac13e0bb101911224650a1 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 2.9E-63 T 14-10-2018 IPR007551 Protein of unknown function DUF520 BJD94_00700 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Gene3D G3DSA:3.40.50.300 1 254 8.0E-67 T 14-10-2018 BJD94_00700 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 SUPERFAMILY SSF52540 1 252 6.69E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00700 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Pfam PF13614 AAA domain 4 177 8.1E-50 T 14-10-2018 IPR025669 AAA domain BJD94_00700 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 1 81 1.8E-13 T 14-10-2018 BJD94_00700 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 96 239 1.6E-7 T 14-10-2018 BJD94_18530 20518a7dde64596ce5bebd6533ccf6f1 324 SUPERFAMILY SSF161098 93 311 3.11E-15 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18530 20518a7dde64596ce5bebd6533ccf6f1 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 5.5E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_18530 20518a7dde64596ce5bebd6533ccf6f1 324 Gene3D G3DSA:1.10.3720.10 89 316 6.6E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_20540 fcd138ee60301ed39d1791d2d755f9c7 206 Pfam PF01810 LysE type translocator 15 204 1.5E-24 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_20540 fcd138ee60301ed39d1791d2d755f9c7 206 PIRSF PIRSF006324 1 206 6.8E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_05450 5b7bc268b2e92a05781ac8418088df4e 255 Pfam PF07103 Protein of unknown function (DUF1365) 7 243 2.6E-68 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 BJD94_08345 0e938cde488da8758c9d1fc8addff97d 730 SUPERFAMILY SSF161098 425 667 8.0E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_08345 0e938cde488da8758c9d1fc8addff97d 730 SUPERFAMILY SSF69322 68 370 1.96E-8 T 14-10-2018 BJD94_08345 0e938cde488da8758c9d1fc8addff97d 730 Gene3D G3DSA:1.10.3720.10 497 727 8.3E-21 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_08345 0e938cde488da8758c9d1fc8addff97d 730 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 448 724 1.1E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_06850 b2642f380f8dcfcbfc29582cb5d59318 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 3.3E-23 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD94_06850 b2642f380f8dcfcbfc29582cb5d59318 87 Gene3D G3DSA:3.30.1070.10 1 84 2.4E-26 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BJD94_06850 b2642f380f8dcfcbfc29582cb5d59318 87 SUPERFAMILY SSF55229 33 86 6.8E-17 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BJD94_06850 b2642f380f8dcfcbfc29582cb5d59318 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 3.5E-34 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD94_06850 b2642f380f8dcfcbfc29582cb5d59318 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.873 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 Gene3D G3DSA:2.40.500.20 83 194 1.5E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.3E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.9E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF46609 1 84 2.75E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 Gene3D G3DSA:1.10.287.990 20 82 2.0E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PIRSF PIRSF000349 1 194 8.7E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 SUPERFAMILY SSF54719 84 193 7.2E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_06205 05ffbd85142505ae298bbf93555ef2f0 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD94_04740 2c9a6eb1ab859f70cb7428f34d7d0580 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BJD94_04740 2c9a6eb1ab859f70cb7428f34d7d0580 76 SUPERFAMILY SSF52833 3 72 4.28E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily BJD94_04740 2c9a6eb1ab859f70cb7428f34d7d0580 76 Gene3D G3DSA:3.40.30.10 1 73 1.7E-15 T 14-10-2018 BJD94_04740 2c9a6eb1ab859f70cb7428f34d7d0580 76 Pfam PF00462 Glutaredoxin 4 60 1.8E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD94_00340 783defd8c4fa4203568ee8442b362d98 229 Pfam PF06930 Protein of unknown function (DUF1282) 14 224 2.3E-57 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 Pfam PF00691 OmpA family 96 190 1.0E-16 T 14-10-2018 IPR006665 OmpA-like domain BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 Gene3D G3DSA:3.30.1330.60 61 199 2.8E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 ProSitePatterns PS01068 OmpA-like domain. 128 172 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 SUPERFAMILY SSF103088 83 196 1.44E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 PRINTS PR01021 OMPA domain signature 141 157 6.0E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_15575 2f67cbeea29c8ee759519ecde310af61 200 PRINTS PR01021 OMPA domain signature 126 141 6.0E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_13245 d002199af1bbeb45539e69fce6780bb7 331 Pfam PF01435 Peptidase family M48 155 330 1.0E-25 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD94_07900 e1358dba6cf604fdeaffe49eb1bb25c0 179 Pfam PF11810 Domain of unknown function (DUF3332) 5 175 2.3E-43 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 SUPERFAMILY SSF48452 126 242 4.24E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 Gene3D G3DSA:1.25.40.10 164 317 4.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 Gene3D G3DSA:1.25.40.10 21 163 4.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 SMART SM00028 127 160 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 SMART SM00028 207 240 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_19555 d6b7d15627d14cd2ac609fddd5c653e1 499 SMART SM00028 167 200 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_07965 0f8b3353e09e57eb266437ff1602f899 205 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 8.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 Pfam PF00574 Clp protease 25 205 8.4E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.1E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.494 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 SUPERFAMILY SSF52096 23 207 8.59E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 Gene3D G3DSA:3.90.226.10 5 208 6.0E-85 T 14-10-2018 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD94_06615 2929ad1bca60a58e997f2cac7711f56e 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site BJD94_06945 a2d7a781cfcdc540e936bea90245ddd1 261 Gene3D G3DSA:1.10.3470.10 5 259 2.7E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_06945 a2d7a781cfcdc540e936bea90245ddd1 261 Pfam PF00950 ABC 3 transport family 1 255 6.5E-74 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BJD94_06945 a2d7a781cfcdc540e936bea90245ddd1 261 SUPERFAMILY SSF81345 2 256 2.22E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_08095 f042399cd146c86b199bb4afb9578488 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 503 1.9E-145 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD94_08095 f042399cd146c86b199bb4afb9578488 637 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 14-10-2018 IPR018093 BCCT transporter, conserved site BJD94_08095 f042399cd146c86b199bb4afb9578488 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 1.5E-156 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PIRSF PIRSF001415 1 323 3.9E-150 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 239 251 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 1 319 2.6E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 Gene3D G3DSA:3.20.20.70 1 324 8.4E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 SMART SM01004 1 320 2.0E-239 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 SUPERFAMILY SSF51569 1 322 4.83E-143 T 14-10-2018 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 147 166 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 116 130 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 239 255 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 185 204 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 294 313 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_10600 7d249265236b38578a1b37acc83ebac7 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 264 279 6.0E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD94_07000 77fd8a615d6c50bced786bf228f585c5 252 Pfam PF08907 Domain of unknown function (DUF1853) 8 213 1.4E-39 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Gene3D G3DSA:2.40.40.20 705 828 6.5E-47 T 14-10-2018 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 8.2E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 8.8E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.658 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 SUPERFAMILY SSF50692 688 828 5.18E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 SUPERFAMILY SSF53706 38 698 6.15E-199 T 14-10-2018 BJD94_16080 96c7a21793eb81eeab6215a4f31cb17c 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD94_04140 64814b7c0eaefcafceec4c16bdc4a58c 157 Gene3D G3DSA:3.30.450.40 2 157 5.4E-62 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_04140 64814b7c0eaefcafceec4c16bdc4a58c 157 Pfam PF13185 GAF domain 31 145 1.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 BJD94_04140 64814b7c0eaefcafceec4c16bdc4a58c 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site BJD94_04140 64814b7c0eaefcafceec4c16bdc4a58c 157 SUPERFAMILY SSF55781 5 145 3.36E-39 T 14-10-2018 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 Gene3D G3DSA:1.25.40.10 147 255 4.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 Pfam PF13181 Tetratricopeptide repeat 149 180 0.0083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 Gene3D G3DSA:1.25.40.10 35 146 2.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SMART SM00028 149 182 0.37 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SMART SM00028 72 105 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SMART SM00028 292 322 83.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SMART SM00028 358 391 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SUPERFAMILY SSF48452 72 247 2.54E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 Gene3D G3DSA:1.25.40.10 269 390 1.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 Pfam PF13176 Tetratricopeptide repeat 293 320 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_10345 72c2d1a21c3816de0b837561b4619210 405 SUPERFAMILY SSF48452 213 386 9.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_09620 66610e6c79f5ca9bf264f12448085718 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.5E-53 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD94_09620 66610e6c79f5ca9bf264f12448085718 176 SUPERFAMILY SSF50324 3 173 2.22E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD94_09620 66610e6c79f5ca9bf264f12448085718 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD94_09620 66610e6c79f5ca9bf264f12448085718 176 Gene3D G3DSA:3.90.80.10 1 174 7.3E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD94_09620 66610e6c79f5ca9bf264f12448085718 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.518 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD94_13635 b805d9d73ba3cd4b95ba57cf63190b59 170 Gene3D G3DSA:3.90.960.10 8 157 4.5E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_13635 b805d9d73ba3cd4b95ba57cf63190b59 170 SUPERFAMILY SSF55826 6 157 4.19E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD94_13635 b805d9d73ba3cd4b95ba57cf63190b59 170 Pfam PF04073 Aminoacyl-tRNA editing domain 29 146 1.3E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 SUPERFAMILY SSF81901 64 186 2.49E-22 T 14-10-2018 BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 Pfam PF08238 Sel1 repeat 74 106 0.27 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 SMART SM00671 144 179 22.0 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 SMART SM00671 108 143 2.9E-6 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 SMART SM00671 72 107 0.025 T 14-10-2018 IPR006597 Sel1-like repeat BJD94_12430 774ef93c2f3fdf0e3cd5cf54f2fad0a1 211 Gene3D G3DSA:1.25.40.10 34 211 2.3E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 Gene3D G3DSA:3.30.379.10 28 163 4.1E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 420 7.0E-103 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 Gene3D G3DSA:3.20.20.80 164 445 1.3E-89 T 14-10-2018 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 1.7E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 Gene3D G3DSA:3.20.20.80 520 642 1.1E-14 T 14-10-2018 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 4.6E-15 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 SUPERFAMILY SSF55545 30 164 3.79E-30 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD94_15875 986ec3620aae0acbeb634985f41356ab 823 SUPERFAMILY SSF51445 165 617 5.82E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_07800 a7931b7f9582eb05e2a9d5583b432f8a 317 Gene3D G3DSA:3.30.1330.60 153 301 3.7E-53 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_07800 a7931b7f9582eb05e2a9d5583b432f8a 317 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 57 2.7E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain BJD94_07800 a7931b7f9582eb05e2a9d5583b432f8a 317 SUPERFAMILY SSF103088 182 299 8.76E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_07800 a7931b7f9582eb05e2a9d5583b432f8a 317 Pfam PF00691 OmpA family 195 293 1.3E-18 T 14-10-2018 IPR006665 OmpA-like domain BJD94_01565 d625479656f801b162bb784a581a5061 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 2.6E-31 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD94_01565 d625479656f801b162bb784a581a5061 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 2.5E-42 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD94_01565 d625479656f801b162bb784a581a5061 189 SUPERFAMILY SSF101327 3 175 1.24E-30 T 14-10-2018 IPR036255 YgfB-like superfamily BJD94_10420 452973842df92354f2efe83ed98dd93d 184 Gene3D G3DSA:3.90.79.10 7 183 2.0E-48 T 14-10-2018 BJD94_10420 452973842df92354f2efe83ed98dd93d 184 Pfam PF00293 NUDIX domain 47 155 9.3E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_10420 452973842df92354f2efe83ed98dd93d 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_10420 452973842df92354f2efe83ed98dd93d 184 SUPERFAMILY SSF55811 7 178 2.98E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_10420 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 89 104 7.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_10420 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 75 89 7.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.1E-10 T 14-10-2018 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.1E-10 T 14-10-2018 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.1E-10 T 14-10-2018 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.1E-10 T 14-10-2018 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 3.8E-123 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 SUPERFAMILY SSF51905 3 381 3.42E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 Gene3D G3DSA:3.50.50.60 5 335 7.0E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 387 2.2E-147 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 Pfam PF01494 FAD binding domain 4 335 1.3E-23 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD94_13620 deb3d6fcc9839923ea1ef8923db8ae7d 391 Gene3D G3DSA:3.30.9.50 80 269 7.0E-96 T 14-10-2018 BJD94_04865 47883165111f7af21634b7e44e563cd1 238 Pfam PF02698 DUF218 domain 51 175 5.9E-22 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BJD94_05595 854b4319ba2245be50916f078978f392 88 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 86 19.208 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 BJD94_05595 854b4319ba2245be50916f078978f392 88 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 85 3.5E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BJD94_10080 d476d5d8ea4df2d1f06251c2b2ef2cd3 229 SUPERFAMILY SSF53448 1 228 4.93E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10080 d476d5d8ea4df2d1f06251c2b2ef2cd3 229 Pfam PF02348 Cytidylyltransferase 6 78 8.3E-20 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BJD94_10080 d476d5d8ea4df2d1f06251c2b2ef2cd3 229 Gene3D G3DSA:3.90.550.10 2 229 1.8E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_01060 6e17fe43fb73caf97355280aa3c417a1 386 SUPERFAMILY SSF52980 1 382 1.61E-119 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD94_01060 6e17fe43fb73caf97355280aa3c417a1 386 Gene3D G3DSA:3.40.1350.10 251 376 2.7E-78 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BJD94_01060 6e17fe43fb73caf97355280aa3c417a1 386 Gene3D G3DSA:3.40.50.10770 1 140 4.4E-58 T 14-10-2018 BJD94_01060 6e17fe43fb73caf97355280aa3c417a1 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 2.5E-168 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 BJD94_01060 6e17fe43fb73caf97355280aa3c417a1 386 Gene3D G3DSA:1.10.10.680 169 250 2.7E-78 T 14-10-2018 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 Gene3D G3DSA:3.40.50.300 159 336 1.3E-52 T 14-10-2018 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.98 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 SUPERFAMILY SSF52540 151 341 1.34E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 Gene3D G3DSA:2.70.210.12 1 158 7.4E-59 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.6E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 Pfam PF01018 GTP1/OBG 4 156 2.6E-56 T 14-10-2018 IPR006169 GTP1/OBG domain BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 SUPERFAMILY SSF82051 2 157 2.35E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 8.2E-144 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BJD94_09435 b9df462f19fd367ab64f0578315ffd03 389 PIRSF PIRSF002401 1 374 2.5E-137 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 Gene3D G3DSA:3.10.20.30 1 112 8.2E-37 T 14-10-2018 IPR012675 Beta-grasp domain superfamily BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 SUPERFAMILY SSF54292 5 107 1.57E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.2E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.0E-61 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BJD94_08210 923d80f3de09dae1110833f7466c22bc 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BJD94_10525 2fcb48bb9ce93190f8ac8b7321305d95 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 5.9E-89 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 BJD94_03010 df49f2b250425e0586e0fcc7417c707f 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 19 101 4.3E-8 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 BJD94_03010 df49f2b250425e0586e0fcc7417c707f 104 SUPERFAMILY SSF47413 43 90 2.25E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_03010 df49f2b250425e0586e0fcc7417c707f 104 Gene3D G3DSA:1.10.260.40 4 101 1.4E-17 T 14-10-2018 BJD94_02455 637b96599d3c365a986a3dc1144d25df 202 SUPERFAMILY SSF52317 13 200 4.28E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_02455 637b96599d3c365a986a3dc1144d25df 202 Pfam PF01965 DJ-1/PfpI family 15 181 2.1E-21 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD94_02455 637b96599d3c365a986a3dc1144d25df 202 Gene3D G3DSA:3.40.50.880 4 202 4.2E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD94_21795 a83f1e4c241aa931d919e9ab4aa273c2 143 Pfam PF13778 Domain of unknown function (DUF4174) 21 133 6.2E-27 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 BJD94_01855 cf1fdfe08ba6b05060860900f972c8ae 341 Pfam PF09375 Imelysin 42 319 3.3E-45 T 14-10-2018 IPR018976 Imelysin-like domain BJD94_01855 cf1fdfe08ba6b05060860900f972c8ae 341 Gene3D G3DSA:1.20.1420.20 30 341 3.1E-70 T 14-10-2018 IPR038352 Imelysin-like domain superfamily BJD94_04275 e64d602f536b5481a1e68d122d4ec355 368 Pfam PF13439 Glycosyltransferase Family 4 20 177 4.2E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_04275 e64d602f536b5481a1e68d122d4ec355 368 Pfam PF00534 Glycosyl transferases group 1 187 333 7.7E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_04275 e64d602f536b5481a1e68d122d4ec355 368 Gene3D G3DSA:3.40.50.2000 174 350 1.0E-60 T 14-10-2018 BJD94_04275 e64d602f536b5481a1e68d122d4ec355 368 SUPERFAMILY SSF53756 9 362 7.85E-70 T 14-10-2018 BJD94_04275 e64d602f536b5481a1e68d122d4ec355 368 Gene3D G3DSA:3.40.50.2000 35 362 1.0E-60 T 14-10-2018 BJD94_03710 46b61f76605eaa23d006fa989b3c6518 263 Gene3D G3DSA:3.30.65.10 210 262 8.1E-6 T 14-10-2018 BJD94_03710 46b61f76605eaa23d006fa989b3c6518 263 SUPERFAMILY SSF57783 224 260 6.97E-6 T 14-10-2018 BJD94_03710 46b61f76605eaa23d006fa989b3c6518 263 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 223 262 8.0E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BJD94_03710 46b61f76605eaa23d006fa989b3c6518 263 Pfam PF08378 Nuclease-related domain 39 149 6.6E-31 T 14-10-2018 IPR011528 Nuclease-related domain, NERD BJD94_19965 385052817983ca1bb5f420d74fd2af1d 93 SUPERFAMILY SSF53041 14 84 4.05E-8 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD94_19965 385052817983ca1bb5f420d74fd2af1d 93 Gene3D G3DSA:3.40.50.1390 12 91 1.8E-13 T 14-10-2018 BJD94_19965 385052817983ca1bb5f420d74fd2af1d 93 Pfam PF00239 Resolvase, N terminal domain 16 85 1.3E-9 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD94_07815 97200044129638ca845eeaa10b3e9fd8 294 Pfam PF00348 Polyprenyl synthetase 28 270 1.8E-59 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BJD94_07815 97200044129638ca845eeaa10b3e9fd8 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD94_07815 97200044129638ca845eeaa10b3e9fd8 294 SUPERFAMILY SSF48576 2 287 2.88E-87 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD94_07815 97200044129638ca845eeaa10b3e9fd8 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD94_07815 97200044129638ca845eeaa10b3e9fd8 294 Gene3D G3DSA:1.10.600.10 1 294 4.7E-114 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 7.9E-203 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 SUPERFAMILY SSF51998 4 757 5.04E-286 T 14-10-2018 BJD94_01215 8c28c511c4f9354782fbf5f9948be2f4 758 Pfam PF01228 Glycine radical 628 739 2.0E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 BJD94_14535 eb28ab647661c02ffddd2f256536e9f2 248 Pfam PF08666 SAF domain 45 105 1.0E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD94_14535 eb28ab647661c02ffddd2f256536e9f2 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 225 3.7E-74 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB BJD94_14535 eb28ab647661c02ffddd2f256536e9f2 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 3.8E-29 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain BJD94_14535 eb28ab647661c02ffddd2f256536e9f2 248 SMART SM00858 44 106 3.6E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 SUPERFAMILY SSF51569 3 205 3.48E-65 T 14-10-2018 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 203 3.0E-81 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 Gene3D G3DSA:3.20.20.70 1 206 6.5E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 Pfam PF01081 KDPG and KHG aldolase 6 197 2.5E-70 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_16915 3a864cd433f385fd79dffda5fd3bc52e 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD94_12200 6427f5f5378e60b7c30b3e4f4cd4c529 164 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_12200 6427f5f5378e60b7c30b3e4f4cd4c529 164 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_12200 6427f5f5378e60b7c30b3e4f4cd4c529 164 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_12200 6427f5f5378e60b7c30b3e4f4cd4c529 164 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_12200 6427f5f5378e60b7c30b3e4f4cd4c529 164 Pfam PF02308 MgtC family 19 141 4.5E-29 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 Gene3D G3DSA:2.40.320.10 1 198 2.9E-35 T 14-10-2018 BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 Pfam PF01928 CYTH domain 3 197 6.3E-34 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 SMART SM01118 2 203 3.7E-43 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 SUPERFAMILY SSF55154 1 214 9.16E-50 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 Pfam PF05235 CHAD domain 231 432 1.2E-8 T 14-10-2018 IPR007899 CHAD domain BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 SMART SM00880 229 497 1.1E-29 T 14-10-2018 IPR007899 CHAD domain BJD94_09075 27dfb16d04b584a6bbe664763e37bfae 505 Gene3D G3DSA:1.40.20.10 214 446 4.2E-11 T 14-10-2018 IPR038186 CHAD domain superfamily BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 SUPERFAMILY SSF54523 13 141 1.37E-26 T 14-10-2018 BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 Gene3D G3DSA:3.30.700.10 13 141 2.8E-32 T 14-10-2018 BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 Pfam PF00114 Pilin (bacterial filament) 41 141 6.1E-18 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 1.7E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 4.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 1.7E-11 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_13985 82a7f8b9a271cf86affb1043fd9dd600 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 1.7E-11 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD94_18090 38f0bb64b3691c59abcb9befea829219 119 Pfam PF04219 Protein of unknown function, DUF 12 100 2.9E-34 T 14-10-2018 IPR007335 Protein of unknown function DUF413 BJD94_09470 69e6ccd05db1df381a71a4a954f3641e 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 731 4.9E-214 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ BJD94_09470 69e6ccd05db1df381a71a4a954f3641e 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 670 1.7E-78 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BJD94_09470 69e6ccd05db1df381a71a4a954f3641e 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 852 2.8E-68 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 BJD94_08090 0ca24348052bc0cff9267192b2bc4e41 191 Pfam PF09335 SNARE associated Golgi protein 27 147 2.3E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein BJD94_03320 4d9b2b3474d1cf5fb73cf5b26c29f911 106 Pfam PF13711 Domain of unknown function (DUF4160) 9 79 1.2E-14 T 14-10-2018 IPR025427 Protein of unknown function DUF4160 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 SUPERFAMILY SSF103473 3 384 2.22E-67 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_20935 30c10f1dc125731f092f178d014fb224 398 PRINTS PR01035 Tetracycline resistance protein signature 10 26 2.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 PRINTS PR01035 Tetracycline resistance protein signature 40 59 2.9E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 Pfam PF07690 Major Facilitator Superfamily 9 320 2.3E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_20935 30c10f1dc125731f092f178d014fb224 398 Gene3D G3DSA:1.20.1250.20 3 378 4.9E-56 T 14-10-2018 BJD94_03785 b26329fd003b2397b90d4a22c6d411ef 675 SUPERFAMILY SSF58104 372 673 3.14E-57 T 14-10-2018 BJD94_03785 b26329fd003b2397b90d4a22c6d411ef 675 SMART SM00283 412 673 3.0E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_03785 b26329fd003b2397b90d4a22c6d411ef 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 492 639 1.4E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD94_03785 b26329fd003b2397b90d4a22c6d411ef 675 Gene3D G3DSA:1.10.287.950 347 675 1.0E-57 T 14-10-2018 BJD94_00200 ff3c15719a787d60ebe5f7eebf38e5f7 145 Gene3D G3DSA:3.40.630.30 4 129 1.5E-20 T 14-10-2018 BJD94_00200 ff3c15719a787d60ebe5f7eebf38e5f7 145 Pfam PF13302 Acetyltransferase (GNAT) domain 14 116 3.9E-17 T 14-10-2018 IPR000182 GNAT domain BJD94_00200 ff3c15719a787d60ebe5f7eebf38e5f7 145 SUPERFAMILY SSF55729 13 119 9.86E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 382 43.529 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 Pfam PF00155 Aminotransferase class I and II 43 377 2.1E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 Gene3D G3DSA:3.90.1150.10 43 375 8.6E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 378 4.0E-130 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 SUPERFAMILY SSF53383 6 378 6.05E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_05485 167c074960be7958e1ccacd13ec91a93 385 Gene3D G3DSA:3.40.640.10 59 285 8.6E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_18125 dfb6a50d57d60f537ffa7faa909d58e6 131 SUPERFAMILY SSF51316 9 130 3.03E-33 T 14-10-2018 IPR011057 Mss4-like superfamily BJD94_18125 dfb6a50d57d60f537ffa7faa909d58e6 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 113 3.4E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD94_18125 dfb6a50d57d60f537ffa7faa909d58e6 131 Gene3D G3DSA:2.170.150.70 14 131 1.1E-37 T 14-10-2018 BJD94_17270 530b7e165234d58434b541286ebd9103 300 Pfam PF01841 Transglutaminase-like superfamily 93 152 1.6E-9 T 14-10-2018 IPR002931 Transglutaminase-like BJD94_17270 530b7e165234d58434b541286ebd9103 300 Gene3D G3DSA:3.10.620.30 91 164 3.9E-11 T 14-10-2018 BJD94_17270 530b7e165234d58434b541286ebd9103 300 SUPERFAMILY SSF54001 95 255 9.49E-28 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD94_05105 41601686e56a9e4457cf94c92a00a206 216 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_05105 41601686e56a9e4457cf94c92a00a206 216 Gene3D G3DSA:3.40.50.300 1 207 4.6E-52 T 14-10-2018 BJD94_05105 41601686e56a9e4457cf94c92a00a206 216 SUPERFAMILY SSF52540 10 199 3.08E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05105 41601686e56a9e4457cf94c92a00a206 216 Pfam PF00005 ABC transporter 20 163 5.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_05105 41601686e56a9e4457cf94c92a00a206 216 SMART SM00382 28 212 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14410 b0f7dd573e814d3411949ebd08ef88fb 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 129 3.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_14410 b0f7dd573e814d3411949ebd08ef88fb 133 Gene3D G3DSA:3.40.50.10220 35 133 1.9E-26 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_14410 b0f7dd573e814d3411949ebd08ef88fb 133 PIRSF PIRSF029225 2 133 2.1E-48 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_14410 b0f7dd573e814d3411949ebd08ef88fb 133 Pfam PF03603 DNA polymerase III psi subunit 3 130 3.0E-36 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_14410 b0f7dd573e814d3411949ebd08ef88fb 133 SUPERFAMILY SSF102220 30 133 1.24E-30 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD94_01830 b02db1c2faeb3419f0840a6298a44de0 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 381.661 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BJD94_01830 b02db1c2faeb3419f0840a6298a44de0 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 516 6.7E-301 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BJD94_01830 b02db1c2faeb3419f0840a6298a44de0 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 BJD94_10745 d9240f7271a74f8df1b913864f0aa1ad 223 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.653 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD94_10745 d9240f7271a74f8df1b913864f0aa1ad 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.0E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD94_10745 d9240f7271a74f8df1b913864f0aa1ad 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 1.3E-62 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 SUPERFAMILY SSF111369 68 283 2.22E-27 T 14-10-2018 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 366 3.6E-68 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 Gene3D G3DSA:1.10.287.470 111 170 2.0E-77 T 14-10-2018 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 Gene3D G3DSA:2.40.50.100 77 210 2.0E-77 T 14-10-2018 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 Gene3D G3DSA:2.40.420.20 57 364 2.0E-77 T 14-10-2018 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 Gene3D G3DSA:2.40.30.170 63 287 2.0E-77 T 14-10-2018 BJD94_20410 9b419ee4f7737dc48be7f426789032b3 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 279 1.7E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_10285 ddd5b9243e925dc90b40c2447f727834 632 Pfam PF00884 Sulfatase 260 529 6.3E-26 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_10285 ddd5b9243e925dc90b40c2447f727834 632 Gene3D G3DSA:3.40.720.10 251 531 4.2E-43 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_10285 ddd5b9243e925dc90b40c2447f727834 632 SUPERFAMILY SSF53649 258 558 2.76E-39 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_19915 693be78fa1cd28aee577989556e88c8b 283 Pfam PF01497 Periplasmic binding protein 29 257 1.1E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BJD94_19915 693be78fa1cd28aee577989556e88c8b 283 Gene3D G3DSA:3.40.50.1980 23 144 3.0E-33 T 14-10-2018 BJD94_19915 693be78fa1cd28aee577989556e88c8b 283 Gene3D G3DSA:3.40.50.1980 145 283 1.6E-43 T 14-10-2018 BJD94_19915 693be78fa1cd28aee577989556e88c8b 283 SUPERFAMILY SSF53807 27 281 8.24E-47 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 SUPERFAMILY SSF75138 229 353 2.62E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Gene3D G3DSA:3.40.50.10950 398 709 6.6E-134 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 7.7E-132 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Gene3D G3DSA:3.40.1390.20 225 365 2.6E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 SUPERFAMILY SSF53659 392 709 3.04E-96 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Pfam PF07085 DRTGG domain 233 344 6.1E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Pfam PF13500 AAA domain 3 229 7.7E-50 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 SUPERFAMILY SSF52540 1 240 1.93E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Gene3D G3DSA:3.40.50.300 5 219 2.2E-12 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Gene3D G3DSA:3.40.50.10750 529 682 6.6E-134 T 14-10-2018 BJD94_01775 b0f80282cd1922f585a06c8b338c71c5 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.9E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BJD94_09005 72a7c33597efe7f1a598b7a4d87576b3 149 PIRSF PIRSF006318 1 137 4.3E-51 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 BJD94_09005 72a7c33597efe7f1a598b7a4d87576b3 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 1.2E-45 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 BJD94_11685 e322d2593acfb48adc5d18aa203f4371 197 Pfam PF01914 MarC family integral membrane protein 3 192 1.3E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_11685 e322d2593acfb48adc5d18aa203f4371 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 1.4E-30 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_09560 47041d86ebb8bed7c9ce1429a86770f7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 1.9E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_09560 47041d86ebb8bed7c9ce1429a86770f7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 3.4E-53 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 BJD94_09560 47041d86ebb8bed7c9ce1429a86770f7 148 Gene3D G3DSA:3.40.930.10 1 148 1.1E-53 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_09560 47041d86ebb8bed7c9ce1429a86770f7 148 SUPERFAMILY SSF55804 1 147 4.45E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD94_09560 47041d86ebb8bed7c9ce1429a86770f7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain BJD94_14260 1aa88a928c0d86dbd64e926ca287394e 343 Gene3D G3DSA:2.40.160.10 22 343 9.1E-65 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_14260 1aa88a928c0d86dbd64e926ca287394e 343 SUPERFAMILY SSF56935 22 343 9.77E-54 T 14-10-2018 BJD94_14260 1aa88a928c0d86dbd64e926ca287394e 343 Pfam PF13609 Gram-negative porin 10 312 6.3E-27 T 14-10-2018 BJD94_04730 326112a73dcebcc8db7411757f06b9ad 364 Gene3D G3DSA:3.40.50.150 75 352 3.2E-73 T 14-10-2018 BJD94_04730 326112a73dcebcc8db7411757f06b9ad 364 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 42 354 52.963 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BJD94_04730 326112a73dcebcc8db7411757f06b9ad 364 Pfam PF05971 Protein of unknown function (DUF890) 42 352 2.1E-121 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 BJD94_04730 326112a73dcebcc8db7411757f06b9ad 364 PIRSF PIRSF029038 31 364 3.9E-157 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 BJD94_04730 326112a73dcebcc8db7411757f06b9ad 364 SUPERFAMILY SSF53335 80 351 5.12E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_02385 97631994478e53b6a45994766da19f7f 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.469 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BJD94_02385 97631994478e53b6a45994766da19f7f 195 Pfam PF02525 Flavodoxin-like fold 3 190 2.9E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold BJD94_02385 97631994478e53b6a45994766da19f7f 195 SUPERFAMILY SSF52218 1 193 9.78E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_02385 97631994478e53b6a45994766da19f7f 195 Gene3D G3DSA:3.40.50.360 1 195 1.3E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 1.0E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 137 1.6E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 SUPERFAMILY SSF161070 10 453 5.1E-118 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_00140 ab34a29f237dec0bb155a5c27f767c21 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BJD94_00770 6bd1dabef019f1723002f380ca209db3 442 SUPERFAMILY SSF56935 26 442 5.19E-103 T 14-10-2018 BJD94_00770 6bd1dabef019f1723002f380ca209db3 442 Gene3D G3DSA:2.40.160.60 26 442 1.4E-125 T 14-10-2018 BJD94_00770 6bd1dabef019f1723002f380ca209db3 442 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 442 1.1E-133 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_20450 5800fd3b21910324c00225522b825c51 245 Gene3D G3DSA:3.60.21.10 4 232 5.3E-44 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD94_20450 5800fd3b21910324c00225522b825c51 245 SUPERFAMILY SSF56300 6 226 7.74E-36 T 14-10-2018 BJD94_20450 5800fd3b21910324c00225522b825c51 245 Pfam PF00149 Calcineurin-like phosphoesterase 15 199 1.6E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 SUPERFAMILY SSF53335 27 258 2.01E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.1E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 Gene3D G3DSA:3.40.50.150 40 260 7.5E-75 T 14-10-2018 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.268 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD94_10635 41c80f1048dbf1dfb2635d000dd2a34b 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 1.5E-82 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PIRSF PIRSF004749 1 170 4.0E-57 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 SUPERFAMILY SSF56420 3 165 3.79E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.215 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Pfam PF01327 Polypeptide deformylase 4 152 2.0E-51 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.1E-62 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 Gene3D G3DSA:3.90.45.10 1 169 8.0E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 101 119 4.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 89 100 4.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 33 62 4.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BJD94_10945 2bcbe0a5ab8661cee2cfa4d2faeb0b70 170 PRINTS PR01576 Peptide deformylase signature 120 149 4.4E-38 T 14-10-2018 IPR023635 Peptide deformylase BJD94_03670 8a538cc3e6e3e0227469e84b92c63365 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 2.3E-13 T 14-10-2018 BJD94_03670 8a538cc3e6e3e0227469e84b92c63365 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 4.6E-17 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD94_03670 8a538cc3e6e3e0227469e84b92c63365 93 SUPERFAMILY SSF143120 10 77 4.84E-17 T 14-10-2018 IPR036165 YefM-like superfamily BJD94_03670 8a538cc3e6e3e0227469e84b92c63365 93 Gene3D G3DSA:3.40.1620.40 12 74 6.7E-11 T 14-10-2018 BJD94_05315 2c592f2b8087599d5bdc2f769ab90b20 276 Pfam PF13460 NAD(P)H-binding 9 183 5.1E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain BJD94_05315 2c592f2b8087599d5bdc2f769ab90b20 276 SUPERFAMILY SSF51735 1 247 2.27E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_05315 2c592f2b8087599d5bdc2f769ab90b20 276 Gene3D G3DSA:3.40.50.720 1 276 2.9E-45 T 14-10-2018 BJD94_21470 d88b212da1dc5a8499a354217004c2a2 225 SUPERFAMILY SSF52540 5 224 3.25E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21470 d88b212da1dc5a8499a354217004c2a2 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_21470 d88b212da1dc5a8499a354217004c2a2 225 SMART SM00382 34 220 9.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_21470 d88b212da1dc5a8499a354217004c2a2 225 Pfam PF00005 ABC transporter 25 171 1.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_21470 d88b212da1dc5a8499a354217004c2a2 225 Gene3D G3DSA:3.40.50.300 3 225 2.9E-69 T 14-10-2018 BJD94_19745 47457e68ac8650616e38c34e198ac9c5 107 Pfam PF04892 VanZ like family 35 95 5.0E-9 T 14-10-2018 IPR006976 VanZ-like BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 Pfam PF02167 Cytochrome C1 family 34 244 4.7E-17 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 SUPERFAMILY SSF46626 17 208 1.3E-49 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 PRINTS PR00603 Cytochrome C1 signature 105 129 7.0E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 PRINTS PR00603 Cytochrome C1 signature 42 61 7.0E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 PRINTS PR00603 Cytochrome C1 signature 191 210 7.0E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 PRINTS PR00603 Cytochrome C1 signature 210 225 7.0E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD94_08975 2ade02367025f7078eae2a017641d3ee 245 Gene3D G3DSA:1.10.760.10 26 210 2.9E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_18495 304a67d9033ac017fa3f5e9bd1f5435f 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 310 2.0E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_18495 304a67d9033ac017fa3f5e9bd1f5435f 329 Gene3D G3DSA:1.10.3720.10 70 324 6.9E-64 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18495 304a67d9033ac017fa3f5e9bd1f5435f 329 SUPERFAMILY SSF161098 72 313 5.89E-55 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_18490 2768f4ab7b0d7788b8df7217a4ab29ea 414 Gene3D G3DSA:3.40.190.10 49 339 1.3E-73 T 14-10-2018 BJD94_18490 2768f4ab7b0d7788b8df7217a4ab29ea 414 Gene3D G3DSA:3.40.190.10 137 400 1.3E-73 T 14-10-2018 BJD94_18490 2768f4ab7b0d7788b8df7217a4ab29ea 414 SUPERFAMILY SSF53850 23 409 1.92E-61 T 14-10-2018 BJD94_18490 2768f4ab7b0d7788b8df7217a4ab29ea 414 Pfam PF13416 Bacterial extracellular solute-binding protein 45 345 2.5E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_19635 16b9560e73d7bc880b0fdaff01fff2b9 483 Pfam PF07603 Protein of unknown function (DUF1566) 296 434 7.7E-17 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 BJD94_19890 97c0adaa0b24021f6dd47d410c15247e 101 Pfam PF07383 Protein of unknown function (DUF1496) 43 94 6.1E-23 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.47 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 178 191 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 86 101 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 156 167 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 142 152 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 41 52 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 7 24 2.7E-36 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.0E-42 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 SUPERFAMILY SSF52540 8 204 4.87E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 Gene3D G3DSA:3.40.50.300 3 213 2.0E-61 T 14-10-2018 BJD94_05780 2df2b10e0e999efd81eadd9f6aca37f5 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 1.6E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 BJD94_14465 55e964d1904c8098b3cea99934085a86 203 Pfam PF10144 Bacterial virulence factor haemolysin 7 151 2.2E-38 T 14-10-2018 IPR019305 Uncharacterised protein family Smp BJD94_20980 cee9009de23a23cf56115d80df7aadeb 327 Gene3D G3DSA:3.40.50.300 1 208 4.6E-51 T 14-10-2018 BJD94_20980 cee9009de23a23cf56115d80df7aadeb 327 SUPERFAMILY SSF52540 9 301 3.63E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_20980 cee9009de23a23cf56115d80df7aadeb 327 Gene3D G3DSA:1.10.8.300 209 324 5.1E-35 T 14-10-2018 BJD94_20980 cee9009de23a23cf56115d80df7aadeb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.6E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BJD94_20980 cee9009de23a23cf56115d80df7aadeb 327 PIRSF PIRSF002849 1 327 2.0E-126 T 14-10-2018 BJD94_03380 6cf6679768a357d91f77074bb8c9f89a 139 Pfam PF06271 RDD family 16 132 1.2E-9 T 14-10-2018 IPR010432 RDD BJD94_02985 6cf6679768a357d91f77074bb8c9f89a 139 Pfam PF06271 RDD family 16 132 1.2E-9 T 14-10-2018 IPR010432 RDD BJD94_10965 f28a21d71adfdbd033462242058f84f2 481 Pfam PF02386 Cation transport protein 60 475 7.7E-51 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BJD94_10965 f28a21d71adfdbd033462242058f84f2 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.8E-115 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BJD94_10965 f28a21d71adfdbd033462242058f84f2 481 PIRSF PIRSF006247 1 481 2.9E-165 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BJD94_07335 6d132b969543f9c638666c71a6e8e770 143 PIRSF PIRSF028687 1 143 9.4E-58 T 14-10-2018 IPR007293 Flagellar protein FlgP BJD94_07335 6d132b969543f9c638666c71a6e8e770 143 Pfam PF02169 LPP20 lipoprotein 21 118 8.5E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like BJD94_21225 ed5a99193579969268a0371429a7cc60 433 Gene3D G3DSA:3.40.190.10 135 276 5.6E-21 T 14-10-2018 BJD94_21225 ed5a99193579969268a0371429a7cc60 433 SUPERFAMILY SSF53850 32 291 1.6E-27 T 14-10-2018 BJD94_21225 ed5a99193579969268a0371429a7cc60 433 Pfam PF13343 Bacterial extracellular solute-binding protein 83 295 5.4E-13 T 14-10-2018 BJD94_15705 67b9f9ed28023dc9b8a8820a13ff6de4 203 Gene3D G3DSA:2.60.40.420 43 138 3.5E-11 T 14-10-2018 IPR008972 Cupredoxin BJD94_15705 67b9f9ed28023dc9b8a8820a13ff6de4 203 SUPERFAMILY SSF49503 58 170 6.29E-16 T 14-10-2018 IPR008972 Cupredoxin BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Pfam PF13533 Biotin-lipoyl like 71 110 3.4E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Gene3D G3DSA:1.10.287.470 178 248 3.8E-16 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Gene3D G3DSA:1.10.287.470 99 160 2.6E-11 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 226 321 2.2E-7 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Gene3D G3DSA:2.40.30.170 282 329 3.8E-16 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Gene3D G3DSA:2.40.50.100 70 98 2.6E-11 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 SUPERFAMILY SSF111369 64 153 3.4E-8 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 Gene3D G3DSA:2.40.50.100 249 281 3.8E-16 T 14-10-2018 BJD94_16395 2460044a76a2a0b9f8bee53f77e6a49b 407 SUPERFAMILY SSF111369 198 296 1.44E-6 T 14-10-2018 BJD94_21790 70c03b2aea6d8cab4a4ab5ab598849cf 162 Gene3D G3DSA:3.40.50.1010 2 161 6.7E-57 T 14-10-2018 BJD94_21790 70c03b2aea6d8cab4a4ab5ab598849cf 162 Pfam PF01936 NYN domain 7 155 1.1E-40 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type BJD94_10050 462183c60f8d7b1bbb64129004f64bab 330 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 1.5E-71 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD94_10050 462183c60f8d7b1bbb64129004f64bab 330 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 313 8.0E-102 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 BJD94_10050 462183c60f8d7b1bbb64129004f64bab 330 PIRSF PIRSF026649 12 317 1.2E-83 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD94_10050 462183c60f8d7b1bbb64129004f64bab 330 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 45.803 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 SUPERFAMILY SSF52540 9 262 5.59E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 Gene3D G3DSA:3.40.50.300 8 331 3.2E-79 T 14-10-2018 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF00005 ABC transporter 35 192 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.5E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.0E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BJD94_14175 463ce0d1583e31707b0fb43efa4e2916 331 SMART SM00382 43 241 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_04060 b9f7d379b0a4155bd0c0bed4eb862578 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 3.8E-39 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 BJD94_00670 229ac5e831eda015de85bfa3e238911d 295 Gene3D G3DSA:3.40.50.300 22 263 1.4E-59 T 14-10-2018 BJD94_00670 229ac5e831eda015de85bfa3e238911d 295 PIRSF PIRSF003092 6 287 1.5E-86 T 14-10-2018 IPR025501 ATP binding protein MinD BJD94_00670 229ac5e831eda015de85bfa3e238911d 295 SUPERFAMILY SSF52540 22 283 7.88E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_00670 229ac5e831eda015de85bfa3e238911d 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.8E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BJD94_14735 634d014b142f8288d7a2e601cb9d92e0 325 Gene3D G3DSA:1.50.10.150 5 315 1.1E-44 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily BJD94_14735 634d014b142f8288d7a2e601cb9d92e0 325 Pfam PF03595 Voltage-dependent anion channel 19 306 1.8E-31 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 BJD94_12670 1bc9d35ad92b4635b0f350f24378e99e 305 PIRSF PIRSF005355 1 303 5.5E-83 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 BJD94_12670 1bc9d35ad92b4635b0f350f24378e99e 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.632 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BJD94_12670 1bc9d35ad92b4635b0f350f24378e99e 305 Pfam PF01040 UbiA prenyltransferase family 21 275 9.3E-38 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD94_12670 1bc9d35ad92b4635b0f350f24378e99e 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 5.0E-97 T 14-10-2018 BJD94_15150 f54c6717cbd41cb7af169dea4d67baa6 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 1.1E-186 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_15150 f54c6717cbd41cb7af169dea4d67baa6 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 23 493 2.3E-203 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_05285 a9fd13b2f06264f26aec5596fc4079c6 264 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 249 2.9E-72 T 14-10-2018 IPR005226 UPF0014 family BJD94_21200 ba22b3317b296dfab5129ccad0be2eab 270 Gene3D G3DSA:3.40.190.10 36 264 4.3E-16 T 14-10-2018 BJD94_21200 ba22b3317b296dfab5129ccad0be2eab 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 268 5.0E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_21200 ba22b3317b296dfab5129ccad0be2eab 270 Gene3D G3DSA:3.40.190.10 115 230 4.3E-16 T 14-10-2018 BJD94_21200 ba22b3317b296dfab5129ccad0be2eab 270 SUPERFAMILY SSF53850 31 269 9.48E-26 T 14-10-2018 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 Pfam PF00034 Cytochrome c 30 112 3.1E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 SUPERFAMILY SSF46626 122 206 2.01E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 Gene3D G3DSA:1.10.760.10 30 115 2.1E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 129 202 1.3E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 SUPERFAMILY SSF46626 22 114 8.15E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 PIRSF PIRSF000005 6 207 1.1E-32 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 BJD94_20845 99882e0fb7671a53e12902673ca2e643 207 Gene3D G3DSA:1.10.760.10 119 206 4.9E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD94_01090 92da4ceb951a3f7bd35944b7d7c13774 291 Pfam PF01636 Phosphotransferase enzyme family 30 216 4.1E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase BJD94_01090 92da4ceb951a3f7bd35944b7d7c13774 291 SUPERFAMILY SSF56112 26 269 5.98E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily BJD94_01090 92da4ceb951a3f7bd35944b7d7c13774 291 Gene3D G3DSA:3.90.1200.10 106 287 2.3E-13 T 14-10-2018 BJD94_01090 92da4ceb951a3f7bd35944b7d7c13774 291 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 283 1.2E-106 T 14-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 BJD94_17365 1b8f62baff1a7c0db940d133349f4af9 126 PIRSF PIRSF028299 4 126 1.4E-48 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 BJD94_17365 1b8f62baff1a7c0db940d133349f4af9 126 Pfam PF11777 Protein of unknown function (DUF3316) 6 119 6.9E-18 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 BJD94_03815 131d68ca6d208d597bf9d0b41137f926 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 2.5E-33 T 14-10-2018 IPR025877 MobA-like NTP transferase BJD94_03815 131d68ca6d208d597bf9d0b41137f926 195 SUPERFAMILY SSF53448 8 188 1.94E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_03815 131d68ca6d208d597bf9d0b41137f926 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 187 7.8E-75 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BJD94_03815 131d68ca6d208d597bf9d0b41137f926 195 Gene3D G3DSA:3.90.550.10 6 192 2.1E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_03815 131d68ca6d208d597bf9d0b41137f926 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.015 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BJD94_16350 ab5a933b11ca55de7180bbe4012004c0 417 Pfam PF13520 Amino acid permease 9 405 1.6E-32 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_16350 ab5a933b11ca55de7180bbe4012004c0 417 PIRSF PIRSF006060 1 415 5.3E-58 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD94_16350 ab5a933b11ca55de7180bbe4012004c0 417 Gene3D G3DSA:1.20.1740.10 2 416 1.6E-58 T 14-10-2018 BJD94_12415 cc77328cc8dc9015a9d416c581a6e988 326 SMART SM00244 18 218 1.3E-45 T 14-10-2018 IPR001107 Band 7 domain BJD94_12415 cc77328cc8dc9015a9d416c581a6e988 326 PIRSF PIRSF005651 1 326 4.5E-95 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BJD94_12415 cc77328cc8dc9015a9d416c581a6e988 326 SUPERFAMILY SSF117892 56 223 1.57E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD94_12415 cc77328cc8dc9015a9d416c581a6e988 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.9E-136 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BJD94_12415 cc77328cc8dc9015a9d416c581a6e988 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.0E-28 T 14-10-2018 IPR001107 Band 7 domain BJD94_21710 e8b3f9f20f314fa6736ac8c53cafe2eb 438 Pfam PF07394 Protein of unknown function (DUF1501) 34 422 2.8E-73 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 BJD94_20515 9609eb562e9a05ba1ee2f9f30337ea57 171 Pfam PF00293 NUDIX domain 33 149 4.5E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD94_20515 9609eb562e9a05ba1ee2f9f30337ea57 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD94_20515 9609eb562e9a05ba1ee2f9f30337ea57 171 SUPERFAMILY SSF55811 2 168 6.09E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD94_20515 9609eb562e9a05ba1ee2f9f30337ea57 171 Gene3D G3DSA:3.90.79.10 1 167 3.1E-45 T 14-10-2018 BJD94_17950 13e98340b8f0031c3a61a53c884194bb 84 SUPERFAMILY SSF52091 5 81 1.26E-10 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_17950 13e98340b8f0031c3a61a53c884194bb 84 Gene3D G3DSA:3.30.750.24 2 83 9.2E-8 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_17950 13e98340b8f0031c3a61a53c884194bb 84 Pfam PF13466 STAS domain 6 80 1.1E-10 T 14-10-2018 IPR002645 STAS domain BJD94_17825 05bbb0a3674e9fefe5523716ba8cbd93 361 Gene3D G3DSA:1.25.40.10 28 230 4.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17825 05bbb0a3674e9fefe5523716ba8cbd93 361 Pfam PF02698 DUF218 domain 190 309 1.3E-19 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BJD94_17825 05bbb0a3674e9fefe5523716ba8cbd93 361 SUPERFAMILY SSF48452 81 147 1.05E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_17825 05bbb0a3674e9fefe5523716ba8cbd93 361 SMART SM00028 91 124 0.008 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 SUPERFAMILY SSF50331 237 360 2.04E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 Pfam PF00005 ABC transporter 20 161 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 SMART SM00382 28 210 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 Gene3D G3DSA:3.40.50.300 1 238 3.5E-77 T 14-10-2018 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 Gene3D G3DSA:2.40.50.140 283 346 9.3E-14 T 14-10-2018 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 Gene3D G3DSA:2.40.50.100 239 360 9.3E-14 T 14-10-2018 BJD94_18510 2ba86c92d496b9fa40f612f3de99dc73 365 SUPERFAMILY SSF52540 4 242 2.74E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17390 47c7cc0e1a34c02aa1487fbcc52efcf8 335 Pfam PF11168 Protein of unknown function (DUF2955) 5 141 4.1E-46 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 BJD94_17390 47c7cc0e1a34c02aa1487fbcc52efcf8 335 Pfam PF13515 Fusaric acid resistance protein-like 182 310 9.3E-8 T 14-10-2018 BJD94_17390 47c7cc0e1a34c02aa1487fbcc52efcf8 335 PIRSF PIRSF029594 1 329 3.1E-89 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 BJD94_00360 412e1c3bfa1839cd70bdb46aad503d0c 155 Pfam PF00075 RNase H 3 141 2.4E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BJD94_00360 412e1c3bfa1839cd70bdb46aad503d0c 155 Gene3D G3DSA:3.30.420.10 1 155 3.6E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_00360 412e1c3bfa1839cd70bdb46aad503d0c 155 SUPERFAMILY SSF53098 3 143 1.64E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_00360 412e1c3bfa1839cd70bdb46aad503d0c 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.424 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 BJD94_07325 f60ac20b069e3610bcffce38f9356557 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 99 1.1E-25 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BJD94_07325 f60ac20b069e3610bcffce38f9356557 108 SUPERFAMILY SSF101498 3 99 9.81E-20 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BJD94_07325 f60ac20b069e3610bcffce38f9356557 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 96 5.5E-19 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BJD94_01860 be806f149e58ceedc2b59a610102f345 364 SUPERFAMILY SSF63829 62 317 1.9E-9 T 14-10-2018 BJD94_01860 be806f149e58ceedc2b59a610102f345 364 Pfam PF07433 Protein of unknown function (DUF1513) 71 362 3.2E-110 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 BJD94_01860 be806f149e58ceedc2b59a610102f345 364 PIRSF PIRSF028101 4 364 1.9E-164 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 BJD94_05245 287749643131d7c41c70a3c7efbc5f8b 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.4E-162 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter BJD94_09505 efa861ca089d7986fe88711b185c603e 162 Pfam PF02470 MlaD protein 40 118 1.9E-19 T 14-10-2018 IPR003399 Mce/MlaD BJD94_09505 efa861ca089d7986fe88711b185c603e 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.1E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 BJD94_03435 4306abb7acc4b826a13b6d5887a71322 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 BJD94_03435 4306abb7acc4b826a13b6d5887a71322 73 Gene3D G3DSA:1.10.720.30 14 72 3.5E-30 T 14-10-2018 IPR036361 SAP domain superfamily BJD94_03335 4306abb7acc4b826a13b6d5887a71322 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 BJD94_03335 4306abb7acc4b826a13b6d5887a71322 73 Gene3D G3DSA:1.10.720.30 14 72 3.5E-30 T 14-10-2018 IPR036361 SAP domain superfamily BJD94_16450 28f438445f6208598edb13bc6c099464 251 Pfam PF02754 Cysteine-rich domain 139 223 2.7E-12 T 14-10-2018 IPR004017 Cysteine-rich domain BJD94_16450 28f438445f6208598edb13bc6c099464 251 Pfam PF02754 Cysteine-rich domain 11 91 1.7E-11 T 14-10-2018 IPR004017 Cysteine-rich domain BJD94_10035 b6dd6d26d05e4f33bcabd7835e5837fb 265 Pfam PF06251 Capsule biosynthesis GfcC 34 263 1.3E-71 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 BJD94_10035 b6dd6d26d05e4f33bcabd7835e5837fb 265 Gene3D G3DSA:3.10.560.10 168 240 8.8E-17 T 14-10-2018 BJD94_10125 1dd5d285962db76cd808bd6351c8e5a1 296 Pfam PF00535 Glycosyl transferase family 2 15 181 3.8E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD94_10125 1dd5d285962db76cd808bd6351c8e5a1 296 Gene3D G3DSA:3.90.550.10 1 277 1.3E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_10125 1dd5d285962db76cd808bd6351c8e5a1 296 SUPERFAMILY SSF53448 12 239 9.38E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD94_01125 fb8a8fde6c45b264e9a8fd519af1e994 401 Pfam PF02687 FtsX-like permease family 295 394 7.2E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_01125 fb8a8fde6c45b264e9a8fd519af1e994 401 Pfam PF12704 MacB-like periplasmic core domain 29 205 9.7E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_01125 fb8a8fde6c45b264e9a8fd519af1e994 401 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 401 8.4E-130 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BJD94_20660 6edeeb80677820a41d7b53fb774a7adf 305 Pfam PF00482 Type II secretion system (T2SS), protein F 137 261 7.0E-18 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_03995 6b38e9f2bedf74edef2b1c6fd7de5ea7 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 1.7E-55 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain BJD94_05550 0e4a0fcf99ffc6c72697822fdf50e4dc 1214 SUPERFAMILY SSF55486 294 670 3.42E-17 T 14-10-2018 BJD94_05550 0e4a0fcf99ffc6c72697822fdf50e4dc 1214 Gene3D G3DSA:3.40.390.10 540 671 8.6E-6 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD94_05550 0e4a0fcf99ffc6c72697822fdf50e4dc 1214 Pfam PF16313 Met-zincin 601 720 1.1E-8 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 BJD94_04000 f1431420457592e8b9018db436090bc5 56 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.0E-15 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type BJD94_04000 f1431420457592e8b9018db436090bc5 56 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.7E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type BJD94_09955 250c57a4f9a6a7dbbc4678f90ff80238 373 Pfam PF00534 Glycosyl transferases group 1 189 345 3.7E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_09955 250c57a4f9a6a7dbbc4678f90ff80238 373 Gene3D G3DSA:3.40.50.2000 15 364 2.5E-67 T 14-10-2018 BJD94_09955 250c57a4f9a6a7dbbc4678f90ff80238 373 Pfam PF13439 Glycosyltransferase Family 4 15 174 6.2E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_09955 250c57a4f9a6a7dbbc4678f90ff80238 373 SUPERFAMILY SSF53756 7 372 1.73E-71 T 14-10-2018 BJD94_09955 250c57a4f9a6a7dbbc4678f90ff80238 373 Gene3D G3DSA:3.40.50.2000 171 355 2.5E-67 T 14-10-2018 BJD94_02130 04342664f9253560065c8c45403fd57d 288 SUPERFAMILY SSF52151 3 270 6.02E-32 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD94_02130 04342664f9253560065c8c45403fd57d 288 Pfam PF01734 Patatin-like phospholipase 4 168 2.7E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BJD94_02130 04342664f9253560065c8c45403fd57d 288 Gene3D G3DSA:3.40.1090.10 89 226 2.6E-8 T 14-10-2018 BJD94_02130 04342664f9253560065c8c45403fd57d 288 Gene3D G3DSA:3.40.1090.10 1 88 6.8E-9 T 14-10-2018 BJD94_16535 4f2d6151646891f062fec098f57f0220 155 Pfam PF10517 Electron transfer DM13 59 154 1.1E-18 T 14-10-2018 IPR019545 DM13 domain BJD94_20840 01d0439153816720b920a267112c550d 185 SUPERFAMILY SSF48695 16 182 4.46E-30 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_20840 01d0439153816720b920a267112c550d 185 PIRSF PIRSF000013 1 185 1.2E-69 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 BJD94_20840 01d0439153816720b920a267112c550d 185 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 9 182 4.1E-57 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal BJD94_20840 01d0439153816720b920a267112c550d 185 Gene3D G3DSA:1.10.3820.10 13 185 3.0E-31 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily BJD94_14120 0ff33f45edcaa40ee70e872d0ef0f953 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.539 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BJD94_14120 0ff33f45edcaa40ee70e872d0ef0f953 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 7.1E-42 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BJD94_14120 0ff33f45edcaa40ee70e872d0ef0f953 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-63 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BJD94_14120 0ff33f45edcaa40ee70e872d0ef0f953 122 PIRSF PIRSF006287 1 122 4.7E-49 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 BJD94_01585 071add157eb4903300f8183923278e8c 286 Pfam PF13280 WYL domain 124 208 1.2E-13 T 14-10-2018 IPR026881 WYL domain BJD94_01585 071add157eb4903300f8183923278e8c 286 PIRSF PIRSF015558 1 286 1.1E-108 T 14-10-2018 IPR016634 WYL domain protein, s026 type BJD94_09565 14e168dbb157340a44ed4bc922d173c3 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.501 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BJD94_09565 14e168dbb157340a44ed4bc922d173c3 287 SUPERFAMILY SSF52540 1 155 1.6E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09565 14e168dbb157340a44ed4bc922d173c3 287 PIRSF PIRSF005052 1 286 1.2E-105 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BJD94_09565 14e168dbb157340a44ed4bc922d173c3 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.7E-110 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 BJD94_17590 3a3d0e6ed8f022ad6ef910d8b82e60b3 177 Gene3D G3DSA:3.40.430.10 2 175 4.0E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_17590 3a3d0e6ed8f022ad6ef910d8b82e60b3 177 Pfam PF01872 RibD C-terminal domain 4 168 1.2E-20 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BJD94_17590 3a3d0e6ed8f022ad6ef910d8b82e60b3 177 SUPERFAMILY SSF53597 4 175 6.81E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD94_13815 c301e547790491684caaf9dec55a15fb 153 Hamap MF_01114 Regulatory protein RecX [recX]. 11 153 13.32 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BJD94_13815 c301e547790491684caaf9dec55a15fb 153 Gene3D G3DSA:1.10.10.10 58 101 1.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13815 c301e547790491684caaf9dec55a15fb 153 Gene3D G3DSA:1.10.10.10 104 151 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_13815 c301e547790491684caaf9dec55a15fb 153 Pfam PF02631 RecX family 36 150 4.3E-29 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BJD94_13815 c301e547790491684caaf9dec55a15fb 153 Gene3D G3DSA:1.10.10.10 11 56 6.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_17775 87e603d5bf37e71c52207376985fb9c9 245 Gene3D G3DSA:3.10.620.30 40 231 1.3E-72 T 14-10-2018 BJD94_17775 87e603d5bf37e71c52207376985fb9c9 245 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 81 187 1.5E-13 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted BJD94_20770 80073d9dce8de41bea5799eb3f1b92c7 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 2.0E-33 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 BJD94_20770 80073d9dce8de41bea5799eb3f1b92c7 82 Pfam PF10688 Bacterial inner membrane protein 4 73 4.6E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV BJD94_20770 80073d9dce8de41bea5799eb3f1b92c7 82 Gene3D G3DSA:1.20.1280.290 27 76 2.5E-6 T 14-10-2018 BJD94_21350 88a5582720b4a133b6978d748aa52112 394 Pfam PF03741 Integral membrane protein TerC family 141 342 7.2E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BJD94_21350 88a5582720b4a133b6978d748aa52112 394 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 70 374 2.7E-105 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 BJD94_20830 9db30bc1336b53bb14e40b4dbbde2234 365 Pfam PF08308 PEGA domain 296 360 9.4E-24 T 14-10-2018 IPR013229 PEGA BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 Pfam PF12592 Protein of unknown function (DUF3763) 486 537 9.5E-20 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 SMART SM00382 46 189 5.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 Gene3D G3DSA:3.40.50.300 8 228 1.4E-58 T 14-10-2018 BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 Gene3D G3DSA:1.10.8.300 229 301 9.2E-27 T 14-10-2018 BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 9.3E-23 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BJD94_20520 1af314d6aa28182c0f34ab8ed9d974e6 555 SUPERFAMILY SSF52540 21 303 2.7E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17720 76872cf58172ede0bc988eddd9893605 234 Pfam PF04286 Protein of unknown function (DUF445) 140 233 7.7E-9 T 14-10-2018 IPR007383 Protein of unknown function DUF445 BJD94_21535 29879cc5c2952fdb18c182417a14f5dc 124 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 4.3E-47 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 1.9E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 Gene3D G3DSA:3.40.190.10 129 318 1.0E-119 T 14-10-2018 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PIRSF PIRSF019574 1 345 2.3E-123 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 SUPERFAMILY SSF53850 24 342 1.38E-92 T 14-10-2018 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 3.8E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD94_03940 b677dd89bdf59734f1bd0fd2ade8e01b 345 Gene3D G3DSA:3.40.190.10 29 312 1.0E-119 T 14-10-2018 BJD94_04320 f863e2fd717c600293eec20a9ad57c48 244 Gene3D G3DSA:3.40.50.1360 1 244 5.5E-86 T 14-10-2018 BJD94_04320 f863e2fd717c600293eec20a9ad57c48 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 3.5E-59 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BJD94_04320 f863e2fd717c600293eec20a9ad57c48 244 SUPERFAMILY SSF100950 3 243 5.44E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like BJD94_04320 f863e2fd717c600293eec20a9ad57c48 244 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 242 1.6E-50 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 BJD94_15385 55a61ef7408c043687c250863398e48e 248 SUPERFAMILY SSF53850 14 234 9.08E-34 T 14-10-2018 BJD94_15385 55a61ef7408c043687c250863398e48e 248 Gene3D G3DSA:3.40.190.10 41 230 2.0E-22 T 14-10-2018 BJD94_15385 55a61ef7408c043687c250863398e48e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 234 2.7E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_15385 55a61ef7408c043687c250863398e48e 248 Gene3D G3DSA:3.40.190.10 97 196 2.0E-22 T 14-10-2018 BJD94_18585 0b49e542a4741f2dcaf5c3ef6fc2e4c2 446 PIRSF PIRSF006603 2 446 5.1E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_18585 0b49e542a4741f2dcaf5c3ef6fc2e4c2 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 1.1E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_18585 0b49e542a4741f2dcaf5c3ef6fc2e4c2 446 Pfam PF01554 MatE 247 404 3.6E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_18585 0b49e542a4741f2dcaf5c3ef6fc2e4c2 446 Pfam PF01554 MatE 19 179 2.2E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD94_15140 03bbd02a8332b58a08b83dcd09ab9dc6 267 SUPERFAMILY SSF144059 3 262 2.35E-83 T 14-10-2018 BJD94_15140 03bbd02a8332b58a08b83dcd09ab9dc6 267 PIRSF PIRSF029288 1 265 8.7E-92 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type BJD94_15140 03bbd02a8332b58a08b83dcd09ab9dc6 267 Pfam PF07024 ImpE protein 140 258 2.6E-34 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type BJD94_15140 03bbd02a8332b58a08b83dcd09ab9dc6 267 Gene3D G3DSA:1.25.40.10 5 87 1.2E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_07185 ae02008544b8bba29ba4c33253df0c6f 130 Gene3D G3DSA:2.40.50.140 60 130 9.0E-10 T 14-10-2018 BJD94_07185 ae02008544b8bba29ba4c33253df0c6f 130 SUPERFAMILY SSF141322 71 127 1.01E-5 T 14-10-2018 BJD94_07185 ae02008544b8bba29ba4c33253df0c6f 130 Pfam PF01957 NfeD-like C-terminal, partner-binding 2 128 3.0E-19 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain BJD94_14025 b7a2ac14d2fbba49cfc52206027d0e54 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.2E-72 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 BJD94_14025 b7a2ac14d2fbba49cfc52206027d0e54 176 Pfam PF00156 Phosphoribosyl transferase domain 14 159 4.5E-26 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_14025 b7a2ac14d2fbba49cfc52206027d0e54 176 Gene3D G3DSA:3.40.50.2020 1 176 1.0E-64 T 14-10-2018 BJD94_14025 b7a2ac14d2fbba49cfc52206027d0e54 176 SUPERFAMILY SSF53271 3 175 1.31E-54 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_08275 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 2.4E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC BJD94_08275 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 2.4E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC BJD94_08275 0db84054d3bf18f26d3310a9b2f83495 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 5.5E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC BJD94_08275 0db84054d3bf18f26d3310a9b2f83495 109 SMART SM01323 17 101 4.0E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC BJD94_08275 0db84054d3bf18f26d3310a9b2f83495 109 Pfam PF02699 Preprotein translocase subunit 21 98 5.7E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC BJD94_07890 816d851ac4f31aeca5f11de72f8cbaee 429 Pfam PF00860 Permease family 17 391 8.8E-56 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BJD94_07890 816d851ac4f31aeca5f11de72f8cbaee 429 PIRSF PIRSF005353 1 429 1.7E-189 T 14-10-2018 IPR026033 Purine permease PbuG-like BJD94_21445 a5b7c4e967cd4ca50047e26a63050a38 185 Gene3D G3DSA:3.40.630.30 2 180 1.4E-35 T 14-10-2018 BJD94_21445 a5b7c4e967cd4ca50047e26a63050a38 185 SUPERFAMILY SSF55729 3 170 3.35E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_21445 a5b7c4e967cd4ca50047e26a63050a38 185 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.1E-22 T 14-10-2018 IPR000182 GNAT domain BJD94_21540 1e6fcb67dc718f7485ed8d251c04dfa7 103 Pfam PF01253 Translation initiation factor SUI1 27 96 4.2E-20 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 BJD94_21540 1e6fcb67dc718f7485ed8d251c04dfa7 103 SUPERFAMILY SSF55159 3 99 2.22E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 BJD94_21540 1e6fcb67dc718f7485ed8d251c04dfa7 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.1E-38 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 BJD94_21540 1e6fcb67dc718f7485ed8d251c04dfa7 103 Gene3D G3DSA:3.30.780.10 23 103 1.1E-33 T 14-10-2018 BJD94_21540 1e6fcb67dc718f7485ed8d251c04dfa7 103 PIRSF PIRSF037511 1 103 9.9E-34 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 Gene3D G3DSA:2.160.10.10 91 211 2.0E-23 T 14-10-2018 BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 7 207 2.3E-56 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 Gene3D G3DSA:3.40.50.20 3 90 3.1E-12 T 14-10-2018 BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 SUPERFAMILY SSF51161 3 205 2.63E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_10095 227cb5f714230a2ae5fe0348e6bba07c 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 8.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_05065 e568c33c40f0e8dd21e3c67393d66516 437 Pfam PF07394 Protein of unknown function (DUF1501) 33 419 2.2E-71 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 BJD94_10325 0776ee64faaf6f7f6bb002369b2b4f5e 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 316 434 1.0E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_10325 0776ee64faaf6f7f6bb002369b2b4f5e 453 PIRSF PIRSF037714 2 453 1.2E-171 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein BJD94_19940 b64325c14feb68c120b0d3162ca6f73b 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 7.2E-33 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like BJD94_19940 b64325c14feb68c120b0d3162ca6f73b 167 PIRSF PIRSF030840 1 167 4.2E-64 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like BJD94_19940 b64325c14feb68c120b0d3162ca6f73b 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 9.2E-63 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like BJD94_19940 b64325c14feb68c120b0d3162ca6f73b 167 Gene3D G3DSA:3.40.1570.10 1 167 1.7E-60 T 14-10-2018 BJD94_19940 b64325c14feb68c120b0d3162ca6f73b 167 SUPERFAMILY SSF144064 1 164 4.71E-56 T 14-10-2018 BJD94_19260 fd1b57797ab4b9d1e3137a0b08c83880 425 Pfam PF11301 Protein of unknown function (DUF3103) 66 423 4.1E-182 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 BJD94_12475 611573c29b6e88de53a53300dfb090a9 1043 SUPERFAMILY SSF56219 505 895 8.64E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_12475 611573c29b6e88de53a53300dfb090a9 1043 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 529 889 2.1E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_17640 f537860d8695a8dab85b8ad8226bcf1f 161 Pfam PF04224 Protein of unknown function, DUF417 18 156 2.3E-26 T 14-10-2018 IPR007339 Inner membrane protein RclC-like BJD94_17640 f537860d8695a8dab85b8ad8226bcf1f 161 PIRSF PIRSF028065 2 161 4.4E-70 T 14-10-2018 IPR016865 Inner membrane protein RclC BJD94_01170 3aa1a1051c81c29412fe2cebeeb6be46 262 Gene3D G3DSA:3.30.70.270 121 262 5.9E-26 T 14-10-2018 BJD94_01170 3aa1a1051c81c29412fe2cebeeb6be46 262 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 262 3.6E-20 T 14-10-2018 IPR000160 GGDEF domain BJD94_01170 3aa1a1051c81c29412fe2cebeeb6be46 262 SUPERFAMILY SSF55073 136 262 9.42E-26 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_01170 3aa1a1051c81c29412fe2cebeeb6be46 262 SMART SM00267 120 261 3.2E-18 T 14-10-2018 IPR000160 GGDEF domain BJD94_01170 3aa1a1051c81c29412fe2cebeeb6be46 262 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 262 4.1E-20 T 14-10-2018 IPR000160 GGDEF domain BJD94_18325 34818a7c4a55626ddbe3995b9482bf79 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 8.8E-127 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BJD94_18325 34818a7c4a55626ddbe3995b9482bf79 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 1.7E-191 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BJD94_18325 34818a7c4a55626ddbe3995b9482bf79 726 SUPERFAMILY SSF51445 165 718 2.45E-149 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_18700 09a67934b7d69518b0134e25b50902be 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.0E-16 T 14-10-2018 IPR022569 Ferredoxin, C-terminal BJD94_18700 09a67934b7d69518b0134e25b50902be 107 SUPERFAMILY SSF54862 3 96 7.38E-23 T 14-10-2018 BJD94_18700 09a67934b7d69518b0134e25b50902be 107 Gene3D G3DSA:3.30.70.20 2 103 1.1E-25 T 14-10-2018 BJD94_18700 09a67934b7d69518b0134e25b50902be 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD94_18700 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD94_18700 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD94_18700 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD94_03485 910ea71a4f5b3431abe16ab56f41c8da 171 SUPERFAMILY SSF55729 2 150 5.71E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_03485 910ea71a4f5b3431abe16ab56f41c8da 171 Gene3D G3DSA:3.40.630.30 2 164 7.3E-37 T 14-10-2018 BJD94_03485 910ea71a4f5b3431abe16ab56f41c8da 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 2.5E-27 T 14-10-2018 IPR000182 GNAT domain BJD94_04415 3aa01277cebb5776848f4d3156d9d365 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.3E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_04415 3aa01277cebb5776848f4d3156d9d365 342 SMART SM00062 38 267 3.5E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_04415 3aa01277cebb5776848f4d3156d9d365 342 SUPERFAMILY SSF53850 29 259 3.13E-50 T 14-10-2018 BJD94_04415 3aa01277cebb5776848f4d3156d9d365 342 Gene3D G3DSA:3.40.190.10 130 225 1.2E-51 T 14-10-2018 BJD94_04415 3aa01277cebb5776848f4d3156d9d365 342 Gene3D G3DSA:3.40.190.10 28 257 1.2E-51 T 14-10-2018 BJD94_15300 9e60e8bdc45299fa2d36510992b31c9b 331 Pfam PF00962 Adenosine/AMP deaminase 6 327 2.0E-71 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 BJD94_15300 9e60e8bdc45299fa2d36510992b31c9b 331 Gene3D G3DSA:3.20.20.140 3 331 9.7E-105 T 14-10-2018 BJD94_15300 9e60e8bdc45299fa2d36510992b31c9b 331 SUPERFAMILY SSF51556 5 328 1.8E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase BJD94_15300 9e60e8bdc45299fa2d36510992b31c9b 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.801 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 BJD94_15300 9e60e8bdc45299fa2d36510992b31c9b 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 328 2.2E-89 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 BJD94_09195 549a854ff61964ff6f58ed8b2647e294 329 SUPERFAMILY SSF52540 26 174 2.46E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_09195 549a854ff61964ff6f58ed8b2647e294 329 Gene3D G3DSA:3.40.50.300 2 202 3.7E-25 T 14-10-2018 BJD94_09195 549a854ff61964ff6f58ed8b2647e294 329 Pfam PF01926 50S ribosome-binding GTPase 42 134 8.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 BJD94_14505 a3cb31e56e11e092b201472aeec81b64 561 Pfam PF00501 AMP-binding enzyme 25 440 9.2E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD94_14505 a3cb31e56e11e092b201472aeec81b64 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site BJD94_14505 a3cb31e56e11e092b201472aeec81b64 561 SUPERFAMILY SSF56801 14 547 6.28E-109 T 14-10-2018 BJD94_14505 a3cb31e56e11e092b201472aeec81b64 561 Gene3D G3DSA:3.40.50.12780 10 436 8.4E-84 T 14-10-2018 BJD94_15835 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 191 288 1.19E-9 T 14-10-2018 BJD94_15835 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 155 284 3.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_15835 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 9 144 3.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_15835 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 47 145 5.75E-9 T 14-10-2018 BJD94_20280 80e34dae7e60e68414934c345784055e 486 SUPERFAMILY SSF53720 3 478 4.06E-170 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD94_20280 80e34dae7e60e68414934c345784055e 486 Gene3D G3DSA:3.40.309.10 253 446 4.6E-179 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD94_20280 80e34dae7e60e68414934c345784055e 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 60.523 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD94_20280 80e34dae7e60e68414934c345784055e 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD94_20280 80e34dae7e60e68414934c345784055e 486 Gene3D G3DSA:3.40.605.10 18 474 4.6E-179 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD94_20280 80e34dae7e60e68414934c345784055e 486 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.5E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD94_02015 dd684b84df335769a757bed7855283c5 466 Gene3D G3DSA:3.60.120.10 17 466 4.3E-176 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_02015 dd684b84df335769a757bed7855283c5 466 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_02015 dd684b84df335769a757bed7855283c5 466 PRINTS PR00095 Anthranilate synthase component I signature 414 428 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_02015 dd684b84df335769a757bed7855283c5 466 PRINTS PR00095 Anthranilate synthase component I signature 319 332 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_02015 dd684b84df335769a757bed7855283c5 466 PRINTS PR00095 Anthranilate synthase component I signature 399 413 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_02015 dd684b84df335769a757bed7855283c5 466 Pfam PF00425 chorismate binding enzyme 203 457 2.6E-98 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD94_02015 dd684b84df335769a757bed7855283c5 466 SUPERFAMILY SSF56322 22 465 6.67E-146 T 14-10-2018 IPR005801 ADC synthase GO:0009058 BJD94_02015 dd684b84df335769a757bed7855283c5 466 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 122 458 3.8E-126 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 BJD94_02015 dd684b84df335769a757bed7855283c5 466 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 169 6.5E-28 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD94_10430 5fc46971bee625f6d0e8f9cac7f4c36f 245 Pfam PF01203 Type II secretion system (T2SS), protein N 29 239 7.1E-58 T 14-10-2018 IPR022792 Type II secretion system, protein N BJD94_08000 1a224783c25e2ab5a6d571e2842075ed 392 SUPERFAMILY SSF56935 54 384 7.14E-16 T 14-10-2018 BJD94_00710 cf22b1a2d87ca0181662b16204d47024 164 SMART SM00260 16 153 9.2E-50 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_00710 cf22b1a2d87ca0181662b16204d47024 164 Pfam PF01584 CheW-like domain 20 156 2.5E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD94_00710 cf22b1a2d87ca0181662b16204d47024 164 Gene3D G3DSA:2.30.30.40 22 147 4.9E-43 T 14-10-2018 BJD94_00710 cf22b1a2d87ca0181662b16204d47024 164 SUPERFAMILY SSF50341 14 158 5.1E-42 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD94_00710 cf22b1a2d87ca0181662b16204d47024 164 Gene3D G3DSA:2.40.50.180 39 148 4.9E-43 T 14-10-2018 BJD94_21745 e6e1a06ad387dc65c6126959d48ab171 65 Pfam PF11661 Protein of unknown function (DUF2986) 1 42 1.9E-20 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 BJD94_21825 646143b529c793420cc89a61af7eb061 944 Gene3D G3DSA:2.40.160.50 629 943 8.8E-10 T 14-10-2018 BJD94_21825 646143b529c793420cc89a61af7eb061 944 Gene3D G3DSA:2.120.10.30 382 601 2.3E-20 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD94_21825 646143b529c793420cc89a61af7eb061 944 SUPERFAMILY SSF82171 334 557 3.92E-21 T 14-10-2018 BJD94_03825 2521a08e114cbb0d33875e0441edf2d1 232 Gene3D G3DSA:1.10.3720.10 1 229 1.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_03825 2521a08e114cbb0d33875e0441edf2d1 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 4.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_03825 2521a08e114cbb0d33875e0441edf2d1 232 SUPERFAMILY SSF161098 6 222 1.83E-30 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Gene3D G3DSA:2.40.50.100 48 180 1.6E-72 T 14-10-2018 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Gene3D G3DSA:1.10.287.470 82 141 1.6E-72 T 14-10-2018 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Gene3D G3DSA:2.40.30.170 35 260 1.6E-72 T 14-10-2018 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Gene3D G3DSA:2.40.420.20 262 342 1.6E-72 T 14-10-2018 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Pfam PF13437 HlyD family secretion protein 146 243 5.5E-8 T 14-10-2018 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 Pfam PF13533 Biotin-lipoyl like 52 95 1.5E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 24 344 6.2E-70 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD94_05170 79dce105e5da914bfd506c4db5a79c4f 352 SUPERFAMILY SSF111369 41 255 1.44E-29 T 14-10-2018 BJD94_16700 1837ed5b4725714342f4bc2d7b233694 460 Gene3D G3DSA:1.20.1600.10 35 438 3.0E-43 T 14-10-2018 BJD94_16700 1837ed5b4725714342f4bc2d7b233694 460 Pfam PF02321 Outer membrane efflux protein 42 221 2.1E-10 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_16700 1837ed5b4725714342f4bc2d7b233694 460 Pfam PF02321 Outer membrane efflux protein 257 436 1.3E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD94_16700 1837ed5b4725714342f4bc2d7b233694 460 SUPERFAMILY SSF56954 2 438 4.97E-54 T 14-10-2018 BJD94_16605 82a54bcbaf8d630cb4fef90429778736 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.5E-35 T 14-10-2018 IPR007416 Protein of unknown function DUF469 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 SUPERFAMILY SSF53850 106 309 5.97E-38 T 14-10-2018 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 Gene3D G3DSA:1.10.10.10 14 104 2.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 Pfam PF03466 LysR substrate binding domain 121 307 8.2E-20 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 SUPERFAMILY SSF46785 22 99 2.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 Gene3D G3DSA:3.40.190.10 108 307 2.0E-39 T 14-10-2018 BJD94_09340 ce87422f4ace27fe83b85889c31b0834 319 Gene3D G3DSA:3.40.190.10 187 283 2.0E-39 T 14-10-2018 BJD94_11585 61cd3a9536136bf3d1ee02448d012779 233 Pfam PF04340 Protein of unknown function, DUF484 6 216 2.0E-69 T 14-10-2018 IPR007435 Protein of unknown function DUF484 BJD94_11585 61cd3a9536136bf3d1ee02448d012779 233 Gene3D G3DSA:3.30.450.40 43 221 1.3E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily BJD94_15985 f5887ad4cfec7b6c9362b02f56e6e3e7 442 Gene3D G3DSA:3.60.10.10 170 441 2.4E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_15985 f5887ad4cfec7b6c9362b02f56e6e3e7 442 SUPERFAMILY SSF56219 175 440 5.1E-65 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_15985 f5887ad4cfec7b6c9362b02f56e6e3e7 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 405 4.0E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_10930 48176dd3f477cd41fefbe211b7f27779 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.726 T 14-10-2018 IPR007456 Smg BJD94_10930 48176dd3f477cd41fefbe211b7f27779 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 4.1E-59 T 14-10-2018 IPR007456 Smg BJD94_06340 a187052160f702892328087f2372b22d 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 2.4E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Gene3D G3DSA:1.10.150.130 10 105 3.3E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Gene3D G3DSA:1.10.443.10 118 299 2.2E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 3.5E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 61.256 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 SUPERFAMILY SSF47823 11 107 2.75E-34 T 14-10-2018 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 SUPERFAMILY SSF56349 113 303 2.21E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 56.219 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 Pfam PF00589 Phage integrase family 120 291 8.7E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD94_08660 27d56a6fa27785402a224baf74f0f8c7 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 4.9E-116 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.4E-55 T 14-10-2018 BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 Gene3D G3DSA:3.40.50.720 3 249 7.2E-79 T 14-10-2018 BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 SUPERFAMILY SSF51735 5 250 5.41E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_03540 af64caffb16dc09f01ea65bfe9701c68 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_04770 f3a64f3b44c95fc87ebb30ffd8a1a28e 331 Gene3D G3DSA:1.10.3470.10 4 328 1.6E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_04770 f3a64f3b44c95fc87ebb30ffd8a1a28e 331 Pfam PF01032 FecCD transport family 20 326 6.6E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_04770 f3a64f3b44c95fc87ebb30ffd8a1a28e 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.12 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 BJD94_04770 f3a64f3b44c95fc87ebb30ffd8a1a28e 331 SUPERFAMILY SSF81345 7 326 1.26E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_04680 fdf20af8fa25a05455ede04776ed0bcf 271 SMART SM00062 43 265 0.0084 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_04680 fdf20af8fa25a05455ede04776ed0bcf 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 253 4.2E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_04680 fdf20af8fa25a05455ede04776ed0bcf 271 SUPERFAMILY SSF53850 44 254 5.97E-32 T 14-10-2018 BJD94_04680 fdf20af8fa25a05455ede04776ed0bcf 271 Gene3D G3DSA:3.40.190.10 49 254 8.7E-24 T 14-10-2018 BJD94_04680 fdf20af8fa25a05455ede04776ed0bcf 271 Gene3D G3DSA:3.40.190.10 129 225 8.7E-24 T 14-10-2018 BJD94_00830 39da239b2e1f1c2765e1521d5222b6b0 176 Pfam PF04315 Elongation factor P hydroxylase 11 168 3.7E-73 T 14-10-2018 IPR007411 Elongation factor P hydroxylase BJD94_18030 28f32f8a34c746de8f29311dd962f38b 421 Pfam PF02687 FtsX-like permease family 314 411 1.5E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_18030 28f32f8a34c746de8f29311dd962f38b 421 Pfam PF12704 MacB-like periplasmic core domain 27 254 8.2E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_10795 c516c7e391fadc5ccafd3b6dd172aed1 148 Pfam PF07681 DoxX 24 104 6.3E-18 T 14-10-2018 IPR032808 DoxX family BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 2.9E-43 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 Gene3D G3DSA:3.30.930.10 1 322 9.8E-108 T 14-10-2018 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 2.5E-126 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 2.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 2.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 SUPERFAMILY SSF55681 10 320 9.96E-81 T 14-10-2018 BJD94_12240 1d54016cc9c5e54baf1c7cba3db91f27 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.735 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BJD94_18920 cdfb5e500a63de712dc8c229b9849d54 301 Pfam PF00892 EamA-like transporter family 158 298 2.9E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_18920 cdfb5e500a63de712dc8c229b9849d54 301 Pfam PF00892 EamA-like transporter family 20 147 1.2E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_18920 cdfb5e500a63de712dc8c229b9849d54 301 SUPERFAMILY SSF103481 51 148 1.24E-9 T 14-10-2018 BJD94_18920 cdfb5e500a63de712dc8c229b9849d54 301 SUPERFAMILY SSF103481 204 299 1.96E-17 T 14-10-2018 BJD94_04565 14c16cb8228c18b89caf046472141e12 513 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.5E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane BJD94_12795 14abf5137fe23acbf475984dc3b1b40f 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 3.2E-40 T 14-10-2018 IPR007446 Pilus assembly protein PilP BJD94_12795 14abf5137fe23acbf475984dc3b1b40f 170 PIRSF PIRSF016481 1 170 2.1E-47 T 14-10-2018 IPR007446 Pilus assembly protein PilP BJD94_12795 14abf5137fe23acbf475984dc3b1b40f 170 Gene3D G3DSA:2.30.30.830 90 170 1.1E-23 T 14-10-2018 BJD94_00925 d72f832bed9c5f05c7af9ddedf601658 358 Gene3D G3DSA:3.30.750.44 119 213 1.1E-6 T 14-10-2018 BJD94_00925 d72f832bed9c5f05c7af9ddedf601658 358 Gene3D G3DSA:2.60.40.10 39 118 1.5E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_04610 66986227567db79d2480a19f26ce21e5 295 SUPERFAMILY SSF161098 57 284 1.05E-41 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04610 66986227567db79d2480a19f26ce21e5 295 Gene3D G3DSA:1.10.3720.10 53 294 1.3E-47 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_04610 66986227567db79d2480a19f26ce21e5 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 290 9.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_21270 f812bfd55d1c799e8a9c02c4c04a8983 161 PIRSF PIRSF003174 1 157 1.7E-48 T 14-10-2018 IPR010292 Uncharacterised protein family CreA BJD94_21270 f812bfd55d1c799e8a9c02c4c04a8983 161 Pfam PF05981 CreA protein 24 146 4.8E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA BJD94_02880 c28cc665f35d6e6687c1fd0aba01b2d4 119 Gene3D G3DSA:3.10.180.10 1 118 2.8E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02880 c28cc665f35d6e6687c1fd0aba01b2d4 119 SUPERFAMILY SSF54593 6 117 2.69E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_02880 c28cc665f35d6e6687c1fd0aba01b2d4 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 3.7E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_14555 8bbcf2f38f579617c3d81dd436398c61 150 Pfam PF07811 TadE-like protein 17 59 5.6E-10 T 14-10-2018 IPR012495 TadE-like BJD94_17230 8eb978e07eba5c59c9a684986beff890 96 Gene3D G3DSA:3.30.70.100 1 94 3.5E-25 T 14-10-2018 BJD94_17230 8eb978e07eba5c59c9a684986beff890 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.0E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BJD94_17230 8eb978e07eba5c59c9a684986beff890 96 SUPERFAMILY SSF54909 2 80 2.91E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 Gene3D G3DSA:3.40.190.10 169 267 4.0E-40 T 14-10-2018 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 Pfam PF03466 LysR substrate binding domain 96 294 2.8E-20 T 14-10-2018 IPR005119 LysR, substrate-binding BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 Gene3D G3DSA:3.40.190.10 93 290 4.0E-40 T 14-10-2018 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 SUPERFAMILY SSF53850 93 294 4.71E-34 T 14-10-2018 BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 Gene3D G3DSA:1.10.10.10 2 87 9.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16860 1c8b7a402a778ddef8879c29e6bc01f7 298 SUPERFAMILY SSF46785 4 85 3.14E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_15655 00fb8eeda38ee5c33be867d41eee88a4 412 Pfam PF01566 Natural resistance-associated macrophage protein 56 379 2.4E-18 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.814 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 216 246 0.04 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 180 213 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 31 96 2.77E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 109 279 1.18E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 180 213 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 69 102 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 214 247 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 35 68 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.02 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_05590 38d4d23c66e38e274972d4bf75633a8f 389 Gene3D G3DSA:1.25.40.10 22 356 1.2E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 SMART SM00862 148 224 6.7E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 Gene3D G3DSA:1.10.10.10 128 227 1.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 SUPERFAMILY SSF46894 125 225 1.56E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 2.2E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 SMART SM00448 2 111 1.0E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 Gene3D G3DSA:3.40.50.2300 1 127 7.9E-38 T 14-10-2018 BJD94_12160 ec78824eddc98d2d9589ba75808a2e51 227 SUPERFAMILY SSF52172 1 123 3.27E-39 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_00780 c3e37a2e8deb84aeaa6736c699fc50ea 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 8.3E-84 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 BJD94_02460 1a51c2afe8738b02046a614eaf4d6e3a 183 Pfam PF13302 Acetyltransferase (GNAT) domain 12 154 2.7E-19 T 14-10-2018 IPR000182 GNAT domain BJD94_02460 1a51c2afe8738b02046a614eaf4d6e3a 183 Gene3D G3DSA:3.40.630.30 5 177 1.5E-30 T 14-10-2018 BJD94_02460 1a51c2afe8738b02046a614eaf4d6e3a 183 SUPERFAMILY SSF55729 8 175 5.95E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_15355 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 BJD94_15355 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 BJD94_15355 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 BJD94_15355 b2241f901f0a02899dfad299521d6b4d 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 2.5E-47 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 BJD94_04395 2132596f2583bfcc73f38454aeb1da09 252 SUPERFAMILY SSF69593 4 242 4.97E-59 T 14-10-2018 BJD94_04395 2132596f2583bfcc73f38454aeb1da09 252 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.3E-42 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BJD94_04395 2132596f2583bfcc73f38454aeb1da09 252 SMART SM00563 67 182 3.0E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_04395 2132596f2583bfcc73f38454aeb1da09 252 Pfam PF01553 Acyltransferase 57 180 5.3E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD94_04175 6049ebeb87e2f2607001e5a24b5e79e8 161 Pfam PF14539 Domain of unknown function (DUF4442) 18 127 6.1E-10 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 BJD94_04175 6049ebeb87e2f2607001e5a24b5e79e8 161 Gene3D G3DSA:3.10.129.10 4 155 4.3E-26 T 14-10-2018 BJD94_04175 6049ebeb87e2f2607001e5a24b5e79e8 161 SUPERFAMILY SSF54637 12 156 1.9E-15 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_12215 d52c9e184b6169705d89ef4994ebdfe5 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 3.9E-37 T 14-10-2018 IPR001107 Band 7 domain BJD94_08375 f73cd7862c9c58c221d9470c1b2be5fd 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.492 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BJD94_08375 f73cd7862c9c58c221d9470c1b2be5fd 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.1E-125 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BJD94_18950 9f247dcea680dc1b0a6948ef5485987b 371 Gene3D G3DSA:2.40.160.50 95 369 1.4E-8 T 14-10-2018 BJD94_18950 9f247dcea680dc1b0a6948ef5485987b 371 Pfam PF01103 Surface antigen 89 294 1.9E-8 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_15795 e37bf652b2465c7c05808a6e5f00e25f 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 1.8E-25 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD BJD94_19340 b13312ecd8dccb3dacc10fe82f44c8bb 413 Pfam PF07690 Major Facilitator Superfamily 23 353 7.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_19340 b13312ecd8dccb3dacc10fe82f44c8bb 413 SUPERFAMILY SSF103473 13 404 6.54E-56 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_19340 b13312ecd8dccb3dacc10fe82f44c8bb 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD94_19340 b13312ecd8dccb3dacc10fe82f44c8bb 413 Gene3D G3DSA:1.20.1250.20 14 409 2.2E-49 T 14-10-2018 BJD94_09255 0ba3c6ad8ff80f1e372b42f1cc1a41cb 410 SMART SM00974 296 390 3.4E-24 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding BJD94_09255 0ba3c6ad8ff80f1e372b42f1cc1a41cb 410 Pfam PF13455 Meiotically up-regulated gene 113 302 390 8.8E-15 T 14-10-2018 BJD94_17850 737cfeac9f63464eb2cdfb9dd7b84783 352 Gene3D G3DSA:2.40.160.10 22 351 9.8E-35 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_17850 737cfeac9f63464eb2cdfb9dd7b84783 352 SUPERFAMILY SSF56935 26 350 1.4E-41 T 14-10-2018 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 SUPERFAMILY SSF102114 19 117 6.67E-7 T 14-10-2018 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 Pfam PF04055 Radical SAM superfamily 19 116 1.6E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 PIRSF PIRSF000370 1 216 2.6E-66 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 Pfam PF13394 4Fe-4S single cluster domain 17 121 4.4E-11 T 14-10-2018 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 2.9E-110 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 31.357 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BJD94_04495 d828d3b1cdebe930ec8823bbe85bf800 216 Gene3D G3DSA:3.20.20.70 1 216 3.5E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD94_18895 809b775e37d0b9b2c724ecf1df52fae0 242 SUPERFAMILY SSF53167 4 220 1.57E-67 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD94_18895 809b775e37d0b9b2c724ecf1df52fae0 242 Gene3D G3DSA:3.40.50.1580 1 241 6.8E-73 T 14-10-2018 BJD94_18895 809b775e37d0b9b2c724ecf1df52fae0 242 Pfam PF01048 Phosphorylase superfamily 17 199 3.2E-31 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD94_11665 e47920b5b47a3035dd092e27fa054de9 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 3.9E-26 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 BJD94_11665 e47920b5b47a3035dd092e27fa054de9 109 Gene3D G3DSA:2.40.50.660 32 108 3.5E-7 T 14-10-2018 BJD94_21385 55c612b817f6ad5b53c6291e61574aad 360 Pfam PF02163 Peptidase family M50 227 260 5.1E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BJD94_05575 e4373c1877097891e81e34ab7e636f34 347 Gene3D G3DSA:1.10.3720.10 133 339 1.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05575 e4373c1877097891e81e34ab7e636f34 347 SUPERFAMILY SSF161098 139 325 3.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05575 e4373c1877097891e81e34ab7e636f34 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 8.8E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_05015 7cfccf0301ae2d630cada018f1700c25 496 SUPERFAMILY SSF51735 21 314 1.54E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_05015 7cfccf0301ae2d630cada018f1700c25 496 Pfam PF13460 NAD(P)H-binding 28 137 1.8E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain BJD94_05015 7cfccf0301ae2d630cada018f1700c25 496 Pfam PF11066 Protein of unknown function (DUF2867) 352 485 2.6E-12 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 BJD94_05015 7cfccf0301ae2d630cada018f1700c25 496 Gene3D G3DSA:3.40.50.720 22 328 6.6E-32 T 14-10-2018 BJD94_15775 2c5162e455d564962b00c68823a476ca 140 SUPERFAMILY SSF55729 33 139 4.58E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_15775 2c5162e455d564962b00c68823a476ca 140 Pfam PF00583 Acetyltransferase (GNAT) family 36 117 1.1E-11 T 14-10-2018 IPR000182 GNAT domain BJD94_15775 2c5162e455d564962b00c68823a476ca 140 Gene3D G3DSA:3.40.630.30 36 139 2.1E-25 T 14-10-2018 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 Pfam PF02253 Phospholipase A1 19 252 4.2E-60 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 Gene3D G3DSA:2.40.230.10 9 255 1.9E-67 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 SUPERFAMILY SSF56931 14 255 2.09E-71 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 54 71 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 220 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 225 245 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 137 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 138 156 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_04850 8c917051555278bd2d1991885aa85b56 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD94_20055 8257729b8c72d7921c585297de671da5 185 Gene3D G3DSA:3.40.630.30 2 174 3.3E-41 T 14-10-2018 BJD94_20055 8257729b8c72d7921c585297de671da5 185 SUPERFAMILY SSF55729 6 173 6.1E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_20055 8257729b8c72d7921c585297de671da5 185 Pfam PF13302 Acetyltransferase (GNAT) domain 31 149 4.7E-22 T 14-10-2018 IPR000182 GNAT domain BJD94_17730 ef250864e37da80b3e31e2b930110b62 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.7E-95 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD94_17730 ef250864e37da80b3e31e2b930110b62 497 Gene3D G3DSA:1.20.1730.10 23 495 1.5E-97 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD94_17730 ef250864e37da80b3e31e2b930110b62 497 Pfam PF00474 Sodium:solute symporter family 36 437 9.5E-107 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD94_17730 ef250864e37da80b3e31e2b930110b62 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 3.8E-220 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 SUPERFAMILY SSF90123 2 300 4.71E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 Pfam PF00664 ABC transporter transmembrane region 3 266 2.8E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 SUPERFAMILY SSF52540 310 547 1.98E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 SMART SM00382 336 537 5.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 Pfam PF00005 ABC transporter 328 475 6.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 Gene3D G3DSA:3.40.50.300 304 557 2.3E-72 T 14-10-2018 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 Gene3D G3DSA:1.20.1560.10 1 293 1.6E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD94_02180 5d826183a12981d050d3460fa4ea4f7e 557 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_04245 beb6564f04471ba0c7eaf493dcbecb8e 392 Gene3D G3DSA:3.40.50.2000 202 358 5.8E-23 T 14-10-2018 BJD94_04245 beb6564f04471ba0c7eaf493dcbecb8e 392 SUPERFAMILY SSF53756 4 369 4.76E-35 T 14-10-2018 BJD94_04245 beb6564f04471ba0c7eaf493dcbecb8e 392 Pfam PF00534 Glycosyl transferases group 1 208 353 7.7E-19 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_01675 21451eca269050e86dd785d6e8b5d195 156 Pfam PF04229 GrpB protein 7 155 1.0E-24 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase BJD94_01675 21451eca269050e86dd785d6e8b5d195 156 SUPERFAMILY SSF81301 7 155 4.25E-32 T 14-10-2018 BJD94_01675 21451eca269050e86dd785d6e8b5d195 156 Gene3D G3DSA:3.30.460.10 4 156 8.2E-22 T 14-10-2018 BJD94_00905 c17fa26cf2079d7a7c2c57329bb078ed 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 5.5E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BJD94_00905 c17fa26cf2079d7a7c2c57329bb078ed 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.638 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BJD94_00905 c17fa26cf2079d7a7c2c57329bb078ed 181 Gene3D G3DSA:3.40.50.2020 1 181 9.9E-66 T 14-10-2018 BJD94_00905 c17fa26cf2079d7a7c2c57329bb078ed 181 SUPERFAMILY SSF53271 11 178 1.1E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like BJD94_00905 c17fa26cf2079d7a7c2c57329bb078ed 181 Pfam PF00156 Phosphoribosyl transferase domain 30 145 1.4E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD94_13675 623612674b114eab088ddc0fba127d1b 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 5.2E-31 T 14-10-2018 BJD94_13675 623612674b114eab088ddc0fba127d1b 156 PIRSF PIRSF004923 1 156 1.4E-38 T 14-10-2018 IPR026268 Protein RseC BJD94_08960 ce764f09a8ebfe6a8fd54033d36d2fb7 197 SMART SM00749 48 111 7.8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BJD94_08960 ce764f09a8ebfe6a8fd54033d36d2fb7 197 SMART SM00749 125 188 1.5E-6 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BJD94_08960 ce764f09a8ebfe6a8fd54033d36d2fb7 197 Pfam PF04972 BON domain 120 185 2.7E-19 T 14-10-2018 IPR007055 BON domain BJD94_08960 ce764f09a8ebfe6a8fd54033d36d2fb7 197 Pfam PF04972 BON domain 44 110 1.2E-11 T 14-10-2018 IPR007055 BON domain BJD94_05055 a473d27929276a4db2ae8e6328d6f475 92 Pfam PF01386 Ribosomal L25p family 4 89 2.0E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD94_05055 a473d27929276a4db2ae8e6328d6f475 92 Gene3D G3DSA:2.40.240.10 1 92 8.5E-35 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_05055 a473d27929276a4db2ae8e6328d6f475 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.282 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD94_05055 a473d27929276a4db2ae8e6328d6f475 92 SUPERFAMILY SSF50715 1 92 6.1E-28 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD94_05055 a473d27929276a4db2ae8e6328d6f475 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 6.0E-48 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD94_06215 2d69317bd3bd47409251527002778d5d 227 Gene3D G3DSA:3.40.50.720 1 226 4.6E-24 T 14-10-2018 BJD94_06215 2d69317bd3bd47409251527002778d5d 227 SUPERFAMILY SSF51735 1 207 9.52E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_06215 2d69317bd3bd47409251527002778d5d 227 Pfam PF00106 short chain dehydrogenase 8 186 1.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 Pfam PF00561 alpha/beta hydrolase fold 23 123 3.1E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 SUPERFAMILY SSF53474 1 267 2.45E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_09125 a6f7f862c70efe347a5991b27523ca3e 272 Gene3D G3DSA:3.40.50.1820 1 270 7.9E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_17505 f315759c57574f518f380a582a3fb50a 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.2E-72 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 BJD94_12575 c85392cbc07140cff3456f8a4e37e496 230 Pfam PF13309 HTH domain 164 221 6.0E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain BJD94_12575 c85392cbc07140cff3456f8a4e37e496 230 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 20 133 1.0E-61 T 14-10-2018 IPR013559 YheO-like BJD94_12575 c85392cbc07140cff3456f8a4e37e496 230 Pfam PF08348 YheO-like PAS domain 21 129 7.8E-36 T 14-10-2018 IPR013559 YheO-like BJD94_04305 f45a7b53a6d24967982000b0821378cb 211 SUPERFAMILY SSF56925 29 181 7.06E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD94_04305 f45a7b53a6d24967982000b0821378cb 211 Pfam PF13505 Outer membrane protein beta-barrel domain 8 174 5.9E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel BJD94_04305 f45a7b53a6d24967982000b0821378cb 211 Gene3D G3DSA:2.40.160.20 25 186 5.4E-5 T 14-10-2018 BJD94_05225 4dbd54b2bfdca3ba75c297dafb67edf2 260 Pfam PF11150 Protein of unknown function (DUF2927) 33 230 4.2E-64 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 BJD94_00555 0f1111dab5dc3e114b5414ebd2fb7ecc 698 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 3.3E-20 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BJD94_00555 0f1111dab5dc3e114b5414ebd2fb7ecc 698 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 463 687 9.6E-55 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BJD94_00555 0f1111dab5dc3e114b5414ebd2fb7ecc 698 Pfam PF07196 Flagellin hook IN motif 125 178 2.0E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD94_13320 91efb21cba71b4c19ef77eaaa7ff986b 135 Gene3D G3DSA:3.10.180.10 8 135 3.3E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_13320 91efb21cba71b4c19ef77eaaa7ff986b 135 SUPERFAMILY SSF54593 1 131 5.19E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_13320 91efb21cba71b4c19ef77eaaa7ff986b 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 5.5E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD94_15390 c60fcb2d4acccf949d5b87c5a10115c1 133 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 9 111 2.0E-49 T 14-10-2018 IPR020358 Uncharacterised protein family Y4oB BJD94_15390 c60fcb2d4acccf949d5b87c5a10115c1 133 Pfam PF09722 Protein of unknown function (DUF2384) 76 130 5.0E-7 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 BJD94_04755 8151c5ac419fefea7aa29bc30f5a686f 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 178 3.3E-66 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 BJD94_07210 f420284abcd808aed0fdeaacda4d4884 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 246 27.492 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 BJD94_07210 f420284abcd808aed0fdeaacda4d4884 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 1.5E-41 T 14-10-2018 BJD94_06530 0100b5f1d0a235dd28fdd7a1ded94ffe 311 Pfam PF03601 Conserved hypothetical protein 698 25 291 2.9E-54 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 BJD94_10645 853b6d53595ee6723e13d7234e5507d0 302 Pfam PF00892 EamA-like transporter family 155 286 5.9E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_10645 853b6d53595ee6723e13d7234e5507d0 302 Pfam PF00892 EamA-like transporter family 9 141 4.8E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_10645 853b6d53595ee6723e13d7234e5507d0 302 SUPERFAMILY SSF103481 45 144 3.53E-12 T 14-10-2018 BJD94_10645 853b6d53595ee6723e13d7234e5507d0 302 SUPERFAMILY SSF103481 189 291 1.14E-10 T 14-10-2018 BJD94_16670 5c59354ac9d7f3d0b05aadcea3129063 302 Gene3D G3DSA:3.40.50.1980 25 280 3.9E-89 T 14-10-2018 BJD94_16670 5c59354ac9d7f3d0b05aadcea3129063 302 Gene3D G3DSA:3.40.50.1980 171 274 3.9E-89 T 14-10-2018 BJD94_16670 5c59354ac9d7f3d0b05aadcea3129063 302 Pfam PF01497 Periplasmic binding protein 41 275 7.5E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain BJD94_16670 5c59354ac9d7f3d0b05aadcea3129063 302 SUPERFAMILY SSF53807 23 281 3.77E-60 T 14-10-2018 BJD94_05300 81df0e395ec063be28e5a8a199e5c20f 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.1E-9 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like BJD94_05300 81df0e395ec063be28e5a8a199e5c20f 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 2.8E-38 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 BJD94_06065 d3243f72c635eeefddaf0eca0f16d103 300 SUPERFAMILY SSF161098 97 281 8.63E-27 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_06065 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.9E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_06065 d3243f72c635eeefddaf0eca0f16d103 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 8.8E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BJD94_06065 d3243f72c635eeefddaf0eca0f16d103 300 Gene3D G3DSA:1.10.3720.10 96 296 2.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10860 f2b1aea17c1c1a824558d118267d7d09 84 Pfam PF13384 Homeodomain-like domain 20 66 5.9E-11 T 14-10-2018 BJD94_10860 f2b1aea17c1c1a824558d118267d7d09 84 SUPERFAMILY SSF46689 15 81 3.4E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_01705 3e5f90e315944daa9d3d0cc0b200ca1c 256 Pfam PF03741 Integral membrane protein TerC family 16 203 9.3E-43 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 SUPERFAMILY SSF52283 1 136 1.47E-41 T 14-10-2018 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 5.1E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 Gene3D G3DSA:3.40.50.720 103 298 1.0E-131 T 14-10-2018 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 SUPERFAMILY SSF51735 103 299 2.24E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 5.6E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BJD94_01700 0384d241afc4eb383e02b64d4c6934dd 331 Gene3D G3DSA:3.40.50.720 3 318 1.0E-131 T 14-10-2018 BJD94_18070 d3c30ad780ecdfe1141f41a58c2f238b 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.051 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_18070 d3c30ad780ecdfe1141f41a58c2f238b 408 Pfam PF03616 Sodium/glutamate symporter 10 376 3.9E-148 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_18070 d3c30ad780ecdfe1141f41a58c2f238b 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 407 1.9E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 BJD94_03885 52cf56e850209ce3650054b52551b098 206 SUPERFAMILY SSF89155 3 193 1.44E-52 T 14-10-2018 IPR036411 TorD-like superfamily BJD94_03885 52cf56e850209ce3650054b52551b098 206 Pfam PF02613 Nitrate reductase delta subunit 41 156 1.3E-30 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone BJD94_03885 52cf56e850209ce3650054b52551b098 206 Gene3D G3DSA:1.10.3480.10 4 194 7.6E-40 T 14-10-2018 BJD94_10305 d6463da78e772694f1650ca296f503af 347 SUPERFAMILY SSF161098 139 325 1.44E-18 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10305 d6463da78e772694f1650ca296f503af 347 Gene3D G3DSA:1.10.3720.10 133 338 2.5E-17 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_10305 d6463da78e772694f1650ca296f503af 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 5.7E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_13225 ed1793083e90c33e52f1869a8e1702c8 258 SUPERFAMILY SSF49785 2 156 2.89E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_13225 ed1793083e90c33e52f1869a8e1702c8 258 Gene3D G3DSA:2.60.120.260 35 156 1.2E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 SUPERFAMILY SSF53822 29 371 1.48E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 Pfam PF13458 Periplasmic binding protein 29 366 8.6E-72 T 14-10-2018 IPR028081 Leucine-binding protein domain BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 Gene3D G3DSA:3.40.50.2300 32 356 4.0E-87 T 14-10-2018 BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 BJD94_17125 acf88b3ad3d479b88a50772733f0154e 387 Gene3D G3DSA:3.40.50.2300 145 369 4.0E-87 T 14-10-2018 BJD94_09510 de735ea7ce959ad09184ea8a1e11025a 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 260 9.6E-98 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BJD94_09510 de735ea7ce959ad09184ea8a1e11025a 262 Pfam PF02405 Permease MlaE 47 258 3.3E-75 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BJD94_03570 d3e1d6f04f280ee8c79d35856feae2c3 310 Pfam PF14022 Protein of unknown function (DUF4238) 8 298 1.0E-28 T 14-10-2018 IPR025332 Protein of unknown function DUF4238 BJD94_20320 4b13b89603b46a79f93013001044187f 337 Pfam PF10974 Protein of unknown function (DUF2804) 15 335 5.1E-88 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 BJD94_18245 9a6391a5ac8475289ea9bd1921d05677 427 SUPERFAMILY SSF103647 174 233 5.23E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_01890 66271d19eb322dfb8d80076fc0f019b5 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 6.0E-71 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BJD94_01890 66271d19eb322dfb8d80076fc0f019b5 362 Gene3D G3DSA:3.40.190.10 156 327 3.7E-117 T 14-10-2018 BJD94_01890 66271d19eb322dfb8d80076fc0f019b5 362 PIRSF PIRSF039026 4 362 2.4E-141 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like BJD94_01890 66271d19eb322dfb8d80076fc0f019b5 362 Gene3D G3DSA:3.40.190.170 38 348 3.7E-117 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BJD94_13430 cf319f5564c820366dad510f821add43 379 Pfam PF11873 Domain of unknown function (DUF3393) 7 206 2.9E-79 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal BJD94_13430 cf319f5564c820366dad510f821add43 379 Pfam PF01464 Transglycosylase SLT domain 211 332 1.3E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD94_13430 cf319f5564c820366dad510f821add43 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BJD94_13430 cf319f5564c820366dad510f821add43 379 Gene3D G3DSA:1.10.530.10 190 371 2.7E-49 T 14-10-2018 BJD94_13430 cf319f5564c820366dad510f821add43 379 SUPERFAMILY SSF53955 183 371 3.1E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 1.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 1.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 1.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 181 0.0061 T 14-10-2018 BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 Gene3D G3DSA:3.40.50.720 3 249 1.1E-72 T 14-10-2018 BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 Pfam PF00106 short chain dehydrogenase 16 211 6.1E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 SUPERFAMILY SSF51735 12 245 1.06E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.8E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.8E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.8E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.8E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.8E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD94_05620 286c41696d4b4398b66761280d9e38aa 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 29.769 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 Gene3D G3DSA:3.40.50.300 12 292 6.0E-106 T 14-10-2018 BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 Pfam PF01715 IPP transferase 42 286 1.5E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 SUPERFAMILY SSF52540 10 153 4.85E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 6.0E-116 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD94_12395 1c00fbddd5c808ec6330cf61f822410a 315 Gene3D G3DSA:1.10.20.140 115 186 6.0E-106 T 14-10-2018 BJD94_00760 138bc975af030497723ec606783d31c1 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.5E-8 T 14-10-2018 BJD94_00760 138bc975af030497723ec606783d31c1 404 SUPERFAMILY SSF48452 161 266 2.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_00760 138bc975af030497723ec606783d31c1 404 Gene3D G3DSA:1.25.40.10 153 294 3.8E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_00760 138bc975af030497723ec606783d31c1 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 2.1E-32 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI BJD94_19600 91f1bed08cecf74399015228978fb335 704 SUPERFAMILY SSF52540 21 661 1.7E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19600 91f1bed08cecf74399015228978fb335 704 Pfam PF13476 AAA domain 22 292 1.4E-6 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain BJD94_20825 83fba2f4c78ff6effcdf83481eaca499 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 2.8E-299 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase BJD94_17900 f06d0986f07b66af5cb8545019cd8d28 99 SUPERFAMILY SSF52091 7 98 1.28E-21 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_17900 f06d0986f07b66af5cb8545019cd8d28 99 Gene3D G3DSA:3.30.750.24 3 99 3.8E-19 T 14-10-2018 IPR036513 STAS domain superfamily BJD94_17900 f06d0986f07b66af5cb8545019cd8d28 99 Pfam PF01740 STAS domain 6 96 2.7E-10 T 14-10-2018 IPR002645 STAS domain BJD94_20625 17739e6b85cedb373288616b0983ee3a 146 Pfam PF01478 Type IV leader peptidase family 8 104 3.7E-7 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BJD94_20625 17739e6b85cedb373288616b0983ee3a 146 Gene3D G3DSA:1.20.120.1220 2 133 9.1E-8 T 14-10-2018 BJD94_02810 2f5db20796c72f1f87bdab1d6ab42fad 179 Gene3D G3DSA:3.40.50.300 3 161 6.6E-16 T 14-10-2018 BJD94_02810 2f5db20796c72f1f87bdab1d6ab42fad 179 SUPERFAMILY SSF52540 5 102 2.57E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_02810 2f5db20796c72f1f87bdab1d6ab42fad 179 Pfam PF01202 Shikimate kinase 12 45 7.6E-5 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD94_20385 44fc0c46cbd7045d5cc7294d9db2d162 129 Gene3D G3DSA:3.40.250.10 36 123 5.0E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_20385 44fc0c46cbd7045d5cc7294d9db2d162 129 SMART SM00450 34 128 3.5E-20 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_20385 44fc0c46cbd7045d5cc7294d9db2d162 129 Pfam PF00581 Rhodanese-like domain 40 117 1.5E-15 T 14-10-2018 IPR001763 Rhodanese-like domain BJD94_20385 44fc0c46cbd7045d5cc7294d9db2d162 129 SUPERFAMILY SSF52821 13 124 4.06E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily BJD94_02355 082a70cd013b57111fc91c9d7f5ef2e1 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 252 7.2E-18 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_02355 082a70cd013b57111fc91c9d7f5ef2e1 294 Gene3D G3DSA:1.20.81.30 119 229 2.7E-6 T 14-10-2018 BJD94_21620 294198a5706f4291bacd095b20a7374e 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 1.7E-71 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BJD94_21620 294198a5706f4291bacd095b20a7374e 228 Gene3D G3DSA:1.10.3720.10 2 224 5.5E-60 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_21620 294198a5706f4291bacd095b20a7374e 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 213 1.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_21620 294198a5706f4291bacd095b20a7374e 228 SUPERFAMILY SSF161098 6 217 1.03E-47 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_03645 36413b5ec2d79d629a9785838505a80d 162 Pfam PF00583 Acetyltransferase (GNAT) family 36 132 1.0E-7 T 14-10-2018 IPR000182 GNAT domain BJD94_03645 36413b5ec2d79d629a9785838505a80d 162 Gene3D G3DSA:3.40.630.30 6 142 5.7E-10 T 14-10-2018 BJD94_03645 36413b5ec2d79d629a9785838505a80d 162 SUPERFAMILY SSF55729 33 117 1.77E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_21785 730e4c99d5d3047c299c4c3e5e4d7356 255 Pfam PF11932 Protein of unknown function (DUF3450) 8 247 2.4E-83 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 BJD94_21785 730e4c99d5d3047c299c4c3e5e4d7356 255 PIRSF PIRSF028069 1 255 8.5E-102 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 BJD94_13715 0649ae800bb9387d2484cd6d41dacc27 426 SUPERFAMILY SSF56935 28 426 1.03E-17 T 14-10-2018 BJD94_05010 3f84ed5f68d58bf98ddf87d45ed46784 223 Pfam PF00005 ABC transporter 21 167 1.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD94_05010 3f84ed5f68d58bf98ddf87d45ed46784 223 SUPERFAMILY SSF52540 1 218 7.99E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05010 3f84ed5f68d58bf98ddf87d45ed46784 223 Gene3D G3DSA:3.40.50.300 1 223 2.0E-57 T 14-10-2018 BJD94_05010 3f84ed5f68d58bf98ddf87d45ed46784 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD94_05010 3f84ed5f68d58bf98ddf87d45ed46784 223 SMART SM00382 30 218 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain BJD94_14940 d02547602a25ab30189167cac6dab1d6 1040 Pfam PF02412 Thrombospondin type 3 repeat 278 311 0.0075 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 BJD94_14940 d02547602a25ab30189167cac6dab1d6 1040 SUPERFAMILY SSF103647 313 414 7.19E-13 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_14940 d02547602a25ab30189167cac6dab1d6 1040 Gene3D G3DSA:4.10.1080.10 235 346 8.0E-13 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_03325 fa49e02cfc9968672ae64902e0243971 81 SUPERFAMILY SSF143880 4 67 1.26E-6 T 14-10-2018 IPR036782 NE0471-like, N-terminal BJD94_03325 fa49e02cfc9968672ae64902e0243971 81 Pfam PF10387 Protein of unknown function (DUF2442) 6 79 7.1E-9 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 BJD94_01870 8561612d7857dfaefbd4612c75827d73 181 Pfam PF05951 Bacterial protein of unknown function (DUF882) 33 181 9.6E-72 T 14-10-2018 IPR010275 Protein of unknown function DUF882 BJD94_01870 8561612d7857dfaefbd4612c75827d73 181 SUPERFAMILY SSF55166 68 181 2.88E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_01870 8561612d7857dfaefbd4612c75827d73 181 Gene3D G3DSA:3.30.1380.10 63 181 1.1E-11 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD94_04165 d508da84ba6071416d45f39e1e1a64cc 278 PIRSF PIRSF012524 1 278 7.5E-100 T 14-10-2018 IPR014464 Conserved virulence factor B BJD94_04165 d508da84ba6071416d45f39e1e1a64cc 278 Pfam PF13509 S1 domain 71 132 2.1E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain BJD94_04165 d508da84ba6071416d45f39e1e1a64cc 278 Pfam PF13509 S1 domain 4 63 1.2E-22 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain BJD94_04165 d508da84ba6071416d45f39e1e1a64cc 278 Gene3D G3DSA:1.10.10.10 215 277 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_03795 d6e3d088f43fc9d68ddee2923ed126e4 251 Pfam PF03942 DTW domain 30 221 5.6E-40 T 14-10-2018 IPR005636 DTW BJD94_03795 d6e3d088f43fc9d68ddee2923ed126e4 251 SMART SM01144 27 227 1.5E-62 T 14-10-2018 IPR005636 DTW BJD94_14245 aea2512a376fb1f37a865e24bdff1afc 138 PIRSF PIRSF016789 13 135 1.8E-31 T 14-10-2018 IPR007401 Protein of unknown function DUF454 BJD94_14245 aea2512a376fb1f37a865e24bdff1afc 138 Pfam PF04304 Protein of unknown function (DUF454) 17 129 1.6E-32 T 14-10-2018 IPR007401 Protein of unknown function DUF454 BJD94_01385 d169213c75746edb4ab304b0bde28717 214 Pfam PF02613 Nitrate reductase delta subunit 50 182 7.5E-39 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone BJD94_01385 d169213c75746edb4ab304b0bde28717 214 Gene3D G3DSA:1.20.120.1820 3 126 2.8E-41 T 14-10-2018 BJD94_01385 d169213c75746edb4ab304b0bde28717 214 SUPERFAMILY SSF89155 8 212 4.97E-51 T 14-10-2018 IPR036411 TorD-like superfamily BJD94_01385 d169213c75746edb4ab304b0bde28717 214 Gene3D G3DSA:1.20.1280.20 129 214 4.2E-21 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 BJD94_01385 d169213c75746edb4ab304b0bde28717 214 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.364 T 14-10-2018 IPR023069 Chaperone TorD BJD94_12140 8df8f31de0e9589c0e4fc5188c3e8dff 184 Pfam PF04186 FxsA cytoplasmic membrane protein 15 122 1.3E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 BJD94_16160 d1ecd8c957454e6c3d9f3cf5f865ebd7 324 SUPERFAMILY SSF103481 39 138 1.96E-10 T 14-10-2018 BJD94_16160 d1ecd8c957454e6c3d9f3cf5f865ebd7 324 Pfam PF00892 EamA-like transporter family 3 136 8.3E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_16160 d1ecd8c957454e6c3d9f3cf5f865ebd7 324 Pfam PF00892 EamA-like transporter family 155 294 1.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_16160 d1ecd8c957454e6c3d9f3cf5f865ebd7 324 SUPERFAMILY SSF103481 212 294 1.07E-7 T 14-10-2018 BJD94_07635 be6fe4e6ab753166a8e05156d2bd87a4 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_07635 be6fe4e6ab753166a8e05156d2bd87a4 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.219 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_07635 be6fe4e6ab753166a8e05156d2bd87a4 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.5E-135 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_07635 be6fe4e6ab753166a8e05156d2bd87a4 373 Pfam PF01098 Cell cycle protein 24 367 2.7E-113 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD94_20750 1911bc6ffda59e8e4d160d3ebc7bc374 311 Gene3D G3DSA:1.10.3470.10 1 310 1.1E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_20750 1911bc6ffda59e8e4d160d3ebc7bc374 311 Pfam PF01032 FecCD transport family 8 306 2.0E-63 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BJD94_20750 1911bc6ffda59e8e4d160d3ebc7bc374 311 SUPERFAMILY SSF81345 4 306 2.48E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like BJD94_11570 c960ca7c6877a77eeaeb2fb6e1bfa8c9 71 Pfam PF13627 Prokaryotic lipoprotein-attachment site 39 61 2.1E-8 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site BJD94_01460 72b41ad6b0429e757cde8c56ca0e379a 288 SUPERFAMILY SSF117396 4 266 9.02E-72 T 14-10-2018 IPR036520 UPF0759 superfamily BJD94_01460 72b41ad6b0429e757cde8c56ca0e379a 288 Gene3D G3DSA:3.20.20.410 2 268 2.4E-41 T 14-10-2018 IPR036520 UPF0759 superfamily BJD94_01460 72b41ad6b0429e757cde8c56ca0e379a 288 Pfam PF01904 Protein of unknown function DUF72 23 262 2.5E-53 T 14-10-2018 IPR002763 Protein of unknown function DUF72 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 Gene3D G3DSA:3.40.50.300 26 302 3.7E-39 T 14-10-2018 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 Pfam PF06733 DEAD_2 198 261 1.4E-4 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 Pfam PF13307 Helicase C-terminal domain 525 684 1.6E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 SMART SM00491 539 671 8.6E-28 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 SUPERFAMILY SSF52540 16 667 3.15E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 SUPERFAMILY SSF52540 507 666 9.02E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.38 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 BJD94_01280 1afb3a185e4f7d0492f9dda97409bf0f 691 Gene3D G3DSA:3.40.50.300 499 689 5.5E-34 T 14-10-2018 BJD94_14080 50b66825fdc5010c3ee1afc3ad3e147c 238 Gene3D G3DSA:3.40.1350.60 81 236 3.8E-56 T 14-10-2018 BJD94_14080 50b66825fdc5010c3ee1afc3ad3e147c 238 Pfam PF03749 Sugar fermentation stimulation protein 14 229 1.7E-77 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BJD94_14080 50b66825fdc5010c3ee1afc3ad3e147c 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 229 2.1E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BJD94_14080 50b66825fdc5010c3ee1afc3ad3e147c 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 55.189 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein BJD94_14080 50b66825fdc5010c3ee1afc3ad3e147c 238 Gene3D G3DSA:2.40.50.580 1 80 3.6E-27 T 14-10-2018 BJD94_19405 7d993f6c63d65971c613ab05d2ccb7ed 359 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 36 124 5.3E-12 T 14-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain BJD94_19405 7d993f6c63d65971c613ab05d2ccb7ed 359 PIRSF PIRSF035009 1 359 1.2E-143 T 14-10-2018 IPR017035 Uncharacterised conserved protein UCP035009, HsdR, All3000-type BJD94_02085 7299085d481ed6d98090511255c3dd20 292 Pfam PF03547 Membrane transport protein 176 284 2.3E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BJD94_02085 7299085d481ed6d98090511255c3dd20 292 Pfam PF03547 Membrane transport protein 6 152 2.2E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BJD94_13375 6ca2004d8a4ab6ce7a381680db395594 203 SUPERFAMILY SSF58104 26 146 9.68E-6 T 14-10-2018 BJD94_01340 552018ce98a78f3b2d78ec17758144c9 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 3.9E-41 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 BJD94_01340 552018ce98a78f3b2d78ec17758144c9 82 Gene3D G3DSA:1.10.1900.30 9 76 6.0E-35 T 14-10-2018 IPR038191 YciN superfamily BJD94_15750 7affd7d204ba660be5d02d8b089657cc 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 1.6E-49 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15750 7affd7d204ba660be5d02d8b089657cc 294 SUPERFAMILY SSF81452 3 294 6.54E-78 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_15750 7affd7d204ba660be5d02d8b089657cc 294 Gene3D G3DSA:1.10.287.70 1 78 2.5E-18 T 14-10-2018 BJD94_15750 7affd7d204ba660be5d02d8b089657cc 294 Gene3D G3DSA:1.20.120.80 79 294 2.4E-62 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD94_10040 48ab2e87ee128bb30516f9cfc8d1bd09 749 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 51 743 9.9E-270 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH BJD94_04595 39f1cc5be83e3f00de22a5305ee03570 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 1.5E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_17795 0bf0e52a02db141e2f7ff1a8875c43dd 488 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 448 1.4E-79 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BJD94_17795 0bf0e52a02db141e2f7ff1a8875c43dd 488 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 53 440 8.0E-110 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 BJD94_04670 833dc2535301a348620dbf48f9352562 221 PIRSF PIRSF028063 1 221 6.0E-143 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger BJD94_04670 833dc2535301a348620dbf48f9352562 221 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.5E-37 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 BJD94_19060 25d9eb432360444e9ec8e9951bd035dc 144 Pfam PF03733 Inner membrane component domain 76 126 9.9E-18 T 14-10-2018 IPR005185 Inner membrane component domain BJD94_19060 25d9eb432360444e9ec8e9951bd035dc 144 Pfam PF03733 Inner membrane component domain 4 53 6.9E-14 T 14-10-2018 IPR005185 Inner membrane component domain BJD94_19060 25d9eb432360444e9ec8e9951bd035dc 144 PIRSF PIRSF028777 1 138 3.6E-52 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 BJD94_08580 5176cfaa42f4a704c06b644c8a7bd3bc 381 Pfam PF02690 Na+/Pi-cotransporter 217 325 6.9E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BJD94_08580 5176cfaa42f4a704c06b644c8a7bd3bc 381 Pfam PF02690 Na+/Pi-cotransporter 29 149 1.8E-20 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BJD94_19250 7217d4681942c4c5119d2e9f5c76976e 179 Pfam PF13689 Domain of unknown function (DUF4154) 35 171 2.8E-23 T 14-10-2018 IPR025293 YfiR-like BJD94_20100 aff33b25fc82caa511026c9c9f94cad9 190 Gene3D G3DSA:2.170.170.11 14 133 1.6E-30 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_20100 aff33b25fc82caa511026c9c9f94cad9 190 SUPERFAMILY SSF51645 20 186 1.12E-23 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD94_06035 dc0a4ef781951d5fa1376a33e7319248 132 Gene3D G3DSA:3.10.129.10 2 132 4.5E-40 T 14-10-2018 BJD94_06035 dc0a4ef781951d5fa1376a33e7319248 132 Pfam PF03061 Thioesterase superfamily 26 98 2.7E-19 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD94_06035 dc0a4ef781951d5fa1376a33e7319248 132 SUPERFAMILY SSF54637 8 129 2.14E-38 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_00445 8da5de1c2424ecb7f5130bcbd2141137 191 SUPERFAMILY SSF52218 6 188 4.06E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_00445 8da5de1c2424ecb7f5130bcbd2141137 191 ProSitePatterns PS00201 Flavodoxin signature. 9 25 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BJD94_00445 8da5de1c2424ecb7f5130bcbd2141137 191 Pfam PF03358 NADPH-dependent FMN reductase 35 136 1.4E-9 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD94_00445 8da5de1c2424ecb7f5130bcbd2141137 191 Gene3D G3DSA:3.40.50.360 1 191 6.0E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_03650 8477b965493fb3101447b7552253f3a2 103 SUPERFAMILY SSF54909 1 69 1.23E-6 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_14185 1e3b0098971ff9f1eb1913edb2990131 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 7.5E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_14185 1e3b0098971ff9f1eb1913edb2990131 341 SUPERFAMILY SSF161098 96 287 1.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_14185 1e3b0098971ff9f1eb1913edb2990131 341 Gene3D G3DSA:1.10.3720.10 90 299 2.7E-17 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_00145 8d4df89d7fda3a1c8259da9050d3a4bd 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 5.7E-21 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.1E-138 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_07270 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD94_18120 3a29cabae4761f18ec2a79d6d03bb990 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 9.6E-33 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT BJD94_20555 503dec6b08848ed711aca40b3361866e 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 321 2.1E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BJD94_07755 4117dbf6d00f04a2a33613b618f984ca 521 SUPERFAMILY SSF55073 366 518 4.63E-36 T 14-10-2018 IPR029787 Nucleotide cyclase BJD94_07755 4117dbf6d00f04a2a33613b618f984ca 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 4.1E-35 T 14-10-2018 IPR000160 GGDEF domain BJD94_07755 4117dbf6d00f04a2a33613b618f984ca 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.5E-36 T 14-10-2018 IPR000160 GGDEF domain BJD94_07755 4117dbf6d00f04a2a33613b618f984ca 521 Gene3D G3DSA:3.30.70.270 347 520 4.9E-41 T 14-10-2018 BJD94_07755 4117dbf6d00f04a2a33613b618f984ca 521 SMART SM00267 351 521 2.7E-41 T 14-10-2018 IPR000160 GGDEF domain BJD94_09490 bd98645109472b241102f088d1afe7b7 66 Gene3D G3DSA:3.30.300.90 1 66 9.4E-28 T 14-10-2018 BJD94_09490 bd98645109472b241102f088d1afe7b7 66 Pfam PF01722 BolA-like protein 3 56 5.0E-15 T 14-10-2018 IPR002634 BolA protein BJD94_09490 bd98645109472b241102f088d1afe7b7 66 PIRSF PIRSF003113 1 65 4.7E-21 T 14-10-2018 IPR002634 BolA protein BJD94_09490 bd98645109472b241102f088d1afe7b7 66 SUPERFAMILY SSF82657 1 64 1.22E-24 T 14-10-2018 IPR036065 BolA-like superfamily BJD94_09685 5135ea39f1cde32c50d2fa3cd58e72b5 300 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 39 288 1.7E-107 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 BJD94_09685 5135ea39f1cde32c50d2fa3cd58e72b5 300 Pfam PF10987 Protein of unknown function (DUF2806) 60 278 4.4E-88 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 BJD94_08695 37d962ad50e7f2862ea18c57b7c15b3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 2.7E-27 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 PRINTS PR01021 OMPA domain signature 86 108 1.0E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 PRINTS PR01021 OMPA domain signature 116 131 1.0E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 PRINTS PR01021 OMPA domain signature 131 147 1.0E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 Pfam PF00691 OmpA family 85 180 2.4E-17 T 14-10-2018 IPR006665 OmpA-like domain BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 SUPERFAMILY SSF103088 55 184 3.4E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_04475 f3457cb452b547c0896be84dfe8ecadd 208 Gene3D G3DSA:3.30.1330.60 62 185 1.6E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily BJD94_02290 87a3596625b8a98070a885a713a32e04 176 Pfam PF00929 Exonuclease 7 171 2.4E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_02290 87a3596625b8a98070a885a713a32e04 176 SUPERFAMILY SSF53098 4 175 5.98E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_02290 87a3596625b8a98070a885a713a32e04 176 Gene3D G3DSA:3.30.420.10 1 176 1.1E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD94_02290 87a3596625b8a98070a885a713a32e04 176 SMART SM00479 5 176 7.2E-5 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD94_06665 b709b7441b78516b2ec3ec7c906daad9 307 SUPERFAMILY SSF161098 68 294 2.35E-47 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_06665 b709b7441b78516b2ec3ec7c906daad9 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD94_06665 b709b7441b78516b2ec3ec7c906daad9 307 Gene3D G3DSA:1.10.3720.10 64 305 8.5E-56 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_01395 199eed60778610d86c172e491e8ece4f 266 Pfam PF02698 DUF218 domain 80 242 6.5E-27 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BJD94_02320 ea46677a7e3f83acfdf0693244690f84 58 Pfam PF04964 Flp/Fap pilin component 5 52 2.0E-12 T 14-10-2018 IPR007047 Flp/Fap pilin component BJD94_18870 62146254aad9ba4f12c876912b405cf3 127 PIRSF PIRSF005610 1 121 1.1E-13 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BJD94_18870 62146254aad9ba4f12c876912b405cf3 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 123 5.6E-29 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB BJD94_20665 bbaff8380de6e20d1079104a50c9b8e7 292 Pfam PF00482 Type II secretion system (T2SS), protein F 154 281 5.8E-15 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_16005 f4cae6014eedbefa6fae02079d893ed5 135 PIRSF PIRSF006092 13 127 2.0E-27 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD94_16005 f4cae6014eedbefa6fae02079d893ed5 135 Gene3D G3DSA:3.10.50.30 45 135 1.2E-26 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD94_16005 f4cae6014eedbefa6fae02079d893ed5 135 Pfam PF14760 Rnk N-terminus 6 43 1.3E-11 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BJD94_16005 f4cae6014eedbefa6fae02079d893ed5 135 SUPERFAMILY SSF54534 49 126 3.27E-16 T 14-10-2018 BJD94_16005 f4cae6014eedbefa6fae02079d893ed5 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 8.3E-16 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD94_03385 5f0e9e1c46e79b3819e421b574b7f749 489 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 207 386 4.3E-8 T 14-10-2018 IPR018647 Domain of unknown function DUF2075 BJD94_03385 5f0e9e1c46e79b3819e421b574b7f749 489 Gene3D G3DSA:3.40.50.300 173 353 6.7E-10 T 14-10-2018 BJD94_03385 5f0e9e1c46e79b3819e421b574b7f749 489 SUPERFAMILY SSF52540 88 358 4.84E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_21305 bfec503d5a93843563a90dcee5c01515 282 SMART SM00052 35 272 1.5E-10 T 14-10-2018 IPR001633 EAL domain BJD94_21305 bfec503d5a93843563a90dcee5c01515 282 SUPERFAMILY SSF141868 45 275 1.24E-40 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_21305 bfec503d5a93843563a90dcee5c01515 282 Pfam PF00563 EAL domain 43 267 3.9E-48 T 14-10-2018 IPR001633 EAL domain BJD94_21305 bfec503d5a93843563a90dcee5c01515 282 Gene3D G3DSA:3.20.20.450 38 279 5.2E-41 T 14-10-2018 IPR035919 EAL domain superfamily BJD94_19015 8d5885762593434e3e1a21409ddec26c 615 Gene3D G3DSA:1.10.1370.30 27 308 4.4E-8 T 14-10-2018 BJD94_19015 8d5885762593434e3e1a21409ddec26c 615 Pfam PF01432 Peptidase family M3 284 549 7.7E-16 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD94_19015 8d5885762593434e3e1a21409ddec26c 615 Gene3D G3DSA:1.10.1370.20 317 501 2.7E-9 T 14-10-2018 BJD94_19015 8d5885762593434e3e1a21409ddec26c 615 SUPERFAMILY SSF55486 3 551 1.47E-73 T 14-10-2018 BJD94_12420 5ea3f19f82833ea3d5439b85fdf5f932 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 3.6E-24 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 BJD94_17870 2f0794b20a2fac7845b69b4ad8d7a697 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 6.7E-22 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 BJD94_17870 2f0794b20a2fac7845b69b4ad8d7a697 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 4.0E-21 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 BJD94_00130 d733d6333e096a4f0477b67266574160 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 2.1E-72 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 BJD94_07050 7653aea4e36a77de0c2c92bf7ef98ec5 165 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.6E-24 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 BJD94_07050 7653aea4e36a77de0c2c92bf7ef98ec5 165 SUPERFAMILY SSF54637 10 156 4.48E-24 T 14-10-2018 IPR029069 HotDog domain superfamily BJD94_07050 7653aea4e36a77de0c2c92bf7ef98ec5 165 Gene3D G3DSA:3.10.129.10 15 157 2.8E-26 T 14-10-2018 BJD94_06210 87441b8ed52813060d00aeaa44c6df33 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 161 3.7E-62 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) BJD94_18990 7750742aa87323253b29da51cf7723b9 280 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 268 3.2E-57 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 BJD94_18990 7750742aa87323253b29da51cf7723b9 280 SUPERFAMILY SSF51197 1 275 7.78E-82 T 14-10-2018 BJD94_18990 7750742aa87323253b29da51cf7723b9 280 Gene3D G3DSA:3.60.130.10 1 279 2.5E-81 T 14-10-2018 BJD94_08965 4c61f6af628054a828abad4430fcc3c6 158 Gene3D G3DSA:2.30.30.220 3 130 1.9E-52 T 14-10-2018 IPR036760 SspB-like superfamily BJD94_08965 4c61f6af628054a828abad4430fcc3c6 158 PIRSF PIRSF005276 3 158 7.7E-63 T 14-10-2018 IPR007481 Stringent starvation protein B BJD94_08965 4c61f6af628054a828abad4430fcc3c6 158 Pfam PF04386 Stringent starvation protein B 9 158 5.1E-41 T 14-10-2018 IPR007481 Stringent starvation protein B BJD94_08965 4c61f6af628054a828abad4430fcc3c6 158 SUPERFAMILY SSF101738 4 120 1.22E-49 T 14-10-2018 IPR036760 SspB-like superfamily BJD94_11675 26b39cefedae57d2eb6050d259442938 206 Pfam PF07947 YhhN family 26 204 4.0E-34 T 14-10-2018 IPR012506 YhhN-like GO:0016021 BJD94_19000 c28051fccf18affccad55ff0d3103a9c 1222 SUPERFAMILY SSF103647 249 334 1.09E-5 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD94_18600 5b84c93132d1d1b03296dc45dad653d6 336 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 1.4E-32 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 BJD94_17965 10e9690a115850505e706d0c54439670 405 SUPERFAMILY SSF52540 108 368 1.68E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_17965 10e9690a115850505e706d0c54439670 405 Gene3D G3DSA:3.40.50.300 107 398 5.1E-57 T 14-10-2018 BJD94_17965 10e9690a115850505e706d0c54439670 405 Gene3D G3DSA:1.10.1660.30 36 102 5.7E-6 T 14-10-2018 BJD94_17965 10e9690a115850505e706d0c54439670 405 Pfam PF13614 AAA domain 110 296 5.4E-23 T 14-10-2018 IPR025669 AAA domain BJD94_15080 4ffa007faa4e5fcc99eff81acd4dc734 252 Pfam PF13930 DNA/RNA non-specific endonuclease 109 237 3.9E-38 T 14-10-2018 BJD94_13170 9a95aef7148545cec333e382c84c91c1 481 Gene3D G3DSA:3.30.2290.10 14 240 1.3E-13 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD94_13170 9a95aef7148545cec333e382c84c91c1 481 PIRSF PIRSF004919 15 481 2.0E-142 T 14-10-2018 IPR025502 TldD BJD94_13170 9a95aef7148545cec333e382c84c91c1 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.8E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD94_13170 9a95aef7148545cec333e382c84c91c1 481 SUPERFAMILY SSF111283 18 480 1.57E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD94_13525 7b2af8f7177e4d479bbb15f869f1964c 231 Pfam PF04231 Endonuclease I 38 227 4.0E-45 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 BJD94_13525 7b2af8f7177e4d479bbb15f869f1964c 231 SUPERFAMILY SSF54060 20 228 3.18E-94 T 14-10-2018 BJD94_19750 edfed85cd7a44611eedf253f547351f5 437 Pfam PF01943 Polysaccharide biosynthesis protein 28 298 8.4E-8 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BJD94_20245 5c474469dd7ae3428467c7bbb0aa8e54 310 SUPERFAMILY SSF64182 3 307 1.31E-11 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily BJD94_20245 5c474469dd7ae3428467c7bbb0aa8e54 310 PIRSF PIRSF028235 1 310 3.6E-213 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 BJD94_02005 096f84158443d8bbe27bb529691c273b 185 Gene3D G3DSA:3.90.1520.10 1 183 1.2E-55 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 BJD94_02005 096f84158443d8bbe27bb529691c273b 185 Pfam PF07700 Haem-NO-binding 2 162 1.6E-37 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 BJD94_02005 096f84158443d8bbe27bb529691c273b 185 SUPERFAMILY SSF111126 1 177 2.93E-49 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily BJD94_09030 9adfff88c812ba965357ca78e5db410d 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 9 194 1.4E-68 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA BJD94_09030 9adfff88c812ba965357ca78e5db410d 196 Gene3D G3DSA:3.40.50.1820 8 196 1.4E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_09030 9adfff88c812ba965357ca78e5db410d 196 SUPERFAMILY SSF53474 5 194 1.37E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_19570 7c53e5c6c8ac6c37ac39bf705e721c47 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 5.3E-44 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 BJD94_19570 7c53e5c6c8ac6c37ac39bf705e721c47 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 1.4E-37 T 14-10-2018 IPR007553 Domain of unknown function DUF523 BJD94_19570 7c53e5c6c8ac6c37ac39bf705e721c47 317 PIRSF PIRSF037004 1 317 3.8E-139 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 BJD94_05895 c14eef80a62297e6e27fb61e4ffb7ba5 414 Gene3D G3DSA:3.30.360.10 159 355 5.9E-143 T 14-10-2018 BJD94_05895 c14eef80a62297e6e27fb61e4ffb7ba5 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 1.7E-29 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 BJD94_05895 c14eef80a62297e6e27fb61e4ffb7ba5 414 SUPERFAMILY SSF51735 3 178 1.36E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_05895 c14eef80a62297e6e27fb61e4ffb7ba5 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.0E-34 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 BJD94_05895 c14eef80a62297e6e27fb61e4ffb7ba5 414 Gene3D G3DSA:3.40.50.720 4 398 5.9E-143 T 14-10-2018 BJD94_03005 9d8bd37c3277cae99d979b4b044e37b3 110 PIRSF PIRSF039032 1 110 4.4E-44 T 14-10-2018 IPR009387 Toxin HigB-2 BJD94_03005 9d8bd37c3277cae99d979b4b044e37b3 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 5 105 1.7E-9 T 14-10-2018 IPR009387 Toxin HigB-2 BJD94_01670 27acabb7925362e16ebb0d73652a01be 177 Pfam PF13521 AAA domain 4 167 5.3E-37 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain BJD94_01670 27acabb7925362e16ebb0d73652a01be 177 SUPERFAMILY SSF52540 4 171 3.71E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_04435 a28b515c0e4aed5d8f9fc4347aae626d 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 14-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 BJD94_04435 a28b515c0e4aed5d8f9fc4347aae626d 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.1E-38 T 14-10-2018 IPR006214 Bax inhibitor 1-related BJD94_11165 680a4076d802a365edd0c90f75a703c7 250 Gene3D G3DSA:3.40.190.10 93 205 8.4E-29 T 14-10-2018 BJD94_11165 680a4076d802a365edd0c90f75a703c7 250 SMART SM00062 26 247 3.2E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_11165 680a4076d802a365edd0c90f75a703c7 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 7.5E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD94_11165 680a4076d802a365edd0c90f75a703c7 250 SUPERFAMILY SSF53850 1 248 6.09E-57 T 14-10-2018 BJD94_11165 680a4076d802a365edd0c90f75a703c7 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site BJD94_09745 ed692a2ba1a732ea9d1cc2419a505947 164 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 34 160 3.7E-22 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE BJD94_16140 45eee363a77ff1c9d3d94c318950a7ee 219 Pfam PF08239 Bacterial SH3 domain 70 120 2.7E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BJD94_16140 45eee363a77ff1c9d3d94c318950a7ee 219 Gene3D G3DSA:2.30.30.40 60 129 7.2E-6 T 14-10-2018 BJD94_20125 30730499ab6a2f55dd22dbd905424fc6 228 Pfam PF08279 HTH domain 6 59 6.2E-17 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 BJD94_20125 30730499ab6a2f55dd22dbd905424fc6 228 Gene3D G3DSA:1.10.10.10 1 64 4.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_20125 30730499ab6a2f55dd22dbd905424fc6 228 SUPERFAMILY SSF46785 1 61 7.12E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_20125 30730499ab6a2f55dd22dbd905424fc6 228 Pfam PF13280 WYL domain 140 222 8.6E-18 T 14-10-2018 IPR026881 WYL domain BJD94_19410 712aa1161effb00125538dc84373ad19 242 Pfam PF06629 MltA-interacting protein MipA 33 242 5.5E-35 T 14-10-2018 IPR010583 MltA-interacting MipA BJD94_19490 9235aa7c9977b2b2e704604034e1fc95 115 SUPERFAMILY SSF47413 5 87 7.41E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD94_19490 9235aa7c9977b2b2e704604034e1fc95 115 Gene3D G3DSA:1.10.260.40 2 87 4.3E-10 T 14-10-2018 BJD94_00215 58dbf30deea92d779c084a53ba172a71 245 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.2E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00215 58dbf30deea92d779c084a53ba172a71 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_00215 58dbf30deea92d779c084a53ba172a71 245 Gene3D G3DSA:3.30.2350.10 1 225 8.2E-59 T 14-10-2018 BJD94_00215 58dbf30deea92d779c084a53ba172a71 245 SUPERFAMILY SSF55120 2 237 2.72E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD94_08500 294b3a4826ee073d01e9e4370835329c 328 Gene3D G3DSA:3.20.20.300 1 327 1.3E-123 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD94_08500 294b3a4826ee073d01e9e4370835329c 328 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.54 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD94_08500 294b3a4826ee073d01e9e4370835329c 328 SUPERFAMILY SSF51445 2 284 6.21E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily BJD94_08500 294b3a4826ee073d01e9e4370835329c 328 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BJD94_08500 294b3a4826ee073d01e9e4370835329c 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 284 9.4E-81 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD94_04355 c303da14363e04e3184f3ba649c3abcd 388 Pfam PF12698 ABC-2 family transporter protein 15 372 5.3E-39 T 14-10-2018 BJD94_00600 98973bb4873996299f282895a3630fec 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 3.0E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BJD94_00600 98973bb4873996299f282895a3630fec 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 3.0E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BJD94_00600 98973bb4873996299f282895a3630fec 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 3.0E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BJD94_00600 98973bb4873996299f282895a3630fec 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 1.6E-33 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 Gene3D G3DSA:1.20.81.30 257 370 3.5E-28 T 14-10-2018 BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.3E-30 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.0E-27 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_13090 f4c0e5c2c76c6a19d908d04940241f0f 406 Gene3D G3DSA:1.20.81.30 59 176 2.6E-32 T 14-10-2018 BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 PIRSF PIRSF036597 932 1248 2.2E-133 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 PIRSF PIRSF036597 1 939 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 113 400 4.1E-81 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 Gene3D G3DSA:2.60.40.10 1031 1113 2.3E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 Gene3D G3DSA:2.60.40.10 757 839 6.0E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 SUPERFAMILY SSF55486 239 323 1.32E-6 T 14-10-2018 BJD94_20615 2b3791dee1be7f825e7c05fd23fba824 1249 Pfam PF05547 Immune inhibitor A peptidase M6 132 341 1.0E-13 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BJD94_03390 6432aadc6621a647ff1ae20a4a70805c 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 93 2.1E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD94_03390 6432aadc6621a647ff1ae20a4a70805c 98 Gene3D G3DSA:3.30.2310.20 1 98 2.9E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD94_02230 9b3748179c0ab7b942f6354a6756c961 368 SUPERFAMILY SSF53756 5 367 2.83E-61 T 14-10-2018 BJD94_02230 9b3748179c0ab7b942f6354a6756c961 368 Pfam PF00534 Glycosyl transferases group 1 199 341 5.5E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_02230 9b3748179c0ab7b942f6354a6756c961 368 Gene3D G3DSA:3.40.50.2000 185 366 4.3E-33 T 14-10-2018 BJD94_02230 9b3748179c0ab7b942f6354a6756c961 368 Gene3D G3DSA:3.40.50.2000 2 184 8.9E-20 T 14-10-2018 BJD94_02230 9b3748179c0ab7b942f6354a6756c961 368 Pfam PF13439 Glycosyltransferase Family 4 18 179 1.4E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD94_09355 e0f3df82f2cb536035ba16df7f97eeff 255 Pfam PF08239 Bacterial SH3 domain 130 182 7.3E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BJD94_09355 e0f3df82f2cb536035ba16df7f97eeff 255 Gene3D G3DSA:2.30.30.40 125 183 1.8E-10 T 14-10-2018 BJD94_16205 0b1a1ab3b1f4f95cb468cd20f64ca712 445 Pfam PF01609 Transposase DDE domain 129 356 1.1E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 BJD94_16205 0b1a1ab3b1f4f95cb468cd20f64ca712 445 SUPERFAMILY SSF53098 122 392 6.83E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily BJD94_16205 0b1a1ab3b1f4f95cb468cd20f64ca712 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 1.1E-27 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal BJD94_02660 932e33affa9266430999639a886f4195 208 TIGRFAM TIGR04498 AbiV_defense: abortive infection protein, AbiV family 17 158 7.6E-37 T 14-10-2018 IPR030987 Abortive infection protein, AbiV family BJD94_10570 bf32e362077307c744dd090a6c94d525 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 4.6E-45 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 BJD94_02675 eb1449a066a38b25bae3b6374c3c5700 107 SUPERFAMILY SSF102705 3 103 4.71E-16 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BJD94_02675 eb1449a066a38b25bae3b6374c3c5700 107 Gene3D G3DSA:3.30.70.120 2 106 3.4E-28 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD94_06260 14d815d58a7a3370b3cd1c44e406426c 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 4.7E-99 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BJD94_06260 14d815d58a7a3370b3cd1c44e406426c 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 47.933 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BJD94_01515 da8ba56b3830ce7a3db2ceaf1470200d 146 Gene3D G3DSA:3.30.420.270 63 137 9.8E-19 T 14-10-2018 BJD94_01515 da8ba56b3830ce7a3db2ceaf1470200d 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 5.2E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD94_01515 da8ba56b3830ce7a3db2ceaf1470200d 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.183 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BJD94_00715 1d0ff4da23274d7da5ad2897df39d9bb 166 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 2.1E-22 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 BJD94_04360 3ed9367d828ba815adca100863c5ae76 381 Pfam PF12698 ABC-2 family transporter protein 22 367 6.9E-39 T 14-10-2018 BJD94_00440 187bc8d015991e880dbf5729d79b8990 144 Pfam PF09842 Predicted membrane protein (DUF2069) 16 118 1.1E-33 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane BJD94_07155 0407fa24387b6506205d29e216da8f38 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 7.5E-68 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 BJD94_17510 92b9e877d703be69b5d08e36fbbdadf3 157 SUPERFAMILY SSF52728 3 156 1.7E-51 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BJD94_17510 92b9e877d703be69b5d08e36fbbdadf3 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 8.5E-51 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 BJD94_17510 92b9e877d703be69b5d08e36fbbdadf3 157 Gene3D G3DSA:3.40.35.10 1 155 1.7E-55 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 BJD94_17510 92b9e877d703be69b5d08e36fbbdadf3 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 5.1E-68 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 BJD94_08815 f5337f443fba190f45b56fb7c16e6c0d 206 Pfam PF03458 UPF0126 domain 95 163 9.0E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD94_08815 f5337f443fba190f45b56fb7c16e6c0d 206 Pfam PF03458 UPF0126 domain 8 81 1.8E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD94_09085 8a8719e795b8dd180653447cb1740fd9 419 Pfam PF01384 Phosphate transporter family 26 407 1.5E-113 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BJD94_09540 761f0fa50b32d2c31283ddb4764a4edd 169 Pfam PF03968 OstA-like protein 35 146 2.9E-31 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BJD94_09540 761f0fa50b32d2c31283ddb4764a4edd 169 Gene3D G3DSA:2.60.450.10 25 162 1.6E-41 T 14-10-2018 BJD94_09540 761f0fa50b32d2c31283ddb4764a4edd 169 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 6 165 24.741 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BJD94_09540 761f0fa50b32d2c31283ddb4764a4edd 169 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 165 1.2E-46 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BJD94_17205 c218acd54e2cc443a201a25333b2d6ad 215 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 215 29.003 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BJD94_17205 c218acd54e2cc443a201a25333b2d6ad 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 210 1.0E-51 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 BJD94_03195 4d21e9f9dac9449528c2cc96b09e678e 305 SUPERFAMILY SSF52467 2 297 1.96E-5 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_20465 88edd0f09cf37e26da2f5b6417aacf19 559 SUPERFAMILY SSF53383 95 555 3.81E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD94_20465 88edd0f09cf37e26da2f5b6417aacf19 559 Gene3D G3DSA:3.40.640.10 118 440 5.4E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD94_20465 88edd0f09cf37e26da2f5b6417aacf19 559 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 462 4.3E-30 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BJD94_09975 7506a519aa546b176b3e5a203b7cd43d 355 Gene3D G3DSA:3.40.50.2000 173 344 2.6E-19 T 14-10-2018 BJD94_09975 7506a519aa546b176b3e5a203b7cd43d 355 SUPERFAMILY SSF53756 48 350 6.28E-25 T 14-10-2018 BJD94_09975 7506a519aa546b176b3e5a203b7cd43d 355 Pfam PF00534 Glycosyl transferases group 1 182 303 6.6E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 BJD94_09975 7506a519aa546b176b3e5a203b7cd43d 355 Gene3D G3DSA:3.40.50.2000 43 352 2.6E-19 T 14-10-2018 BJD94_02445 e50ad605d9fa45f04d203d7d58bf8f81 158 Gene3D G3DSA:3.40.50.1000 2 158 8.2E-30 T 14-10-2018 IPR023214 HAD superfamily BJD94_02445 e50ad605d9fa45f04d203d7d58bf8f81 158 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 132 5.2E-10 T 14-10-2018 BJD94_02445 e50ad605d9fa45f04d203d7d58bf8f81 158 SUPERFAMILY SSF56784 1 141 2.94E-23 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_18645 835aca2869ade57d6f9cc7df3c531562 218 Gene3D G3DSA:1.10.357.10 2 216 2.3E-58 T 14-10-2018 BJD94_18645 835aca2869ade57d6f9cc7df3c531562 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 3.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_18645 835aca2869ade57d6f9cc7df3c531562 218 SUPERFAMILY SSF46689 7 85 7.7E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_15055 9e78502844c64ccb3e59399eecea4a00 196 Gene3D G3DSA:1.20.1440.20 15 196 1.3E-61 T 14-10-2018 IPR023353 LemA-like domain superfamily BJD94_15055 9e78502844c64ccb3e59399eecea4a00 196 SUPERFAMILY SSF140478 25 181 3.66E-53 T 14-10-2018 IPR023353 LemA-like domain superfamily BJD94_15055 9e78502844c64ccb3e59399eecea4a00 196 Pfam PF04011 LemA family 6 196 6.8E-66 T 14-10-2018 IPR007156 LemA BJD94_15280 93c37b6c74b4d430eaf5008761bfef5d 326 Gene3D G3DSA:3.40.50.2300 139 267 1.4E-10 T 14-10-2018 BJD94_15280 93c37b6c74b4d430eaf5008761bfef5d 326 Gene3D G3DSA:3.40.50.2300 71 298 1.4E-10 T 14-10-2018 BJD94_07380 daf6477d90a6326bc0d618aeca95c19c 149 Pfam PF04214 Protein of unknown function, DUF 48 118 5.3E-30 T 14-10-2018 IPR007332 Protein of unknown function DUF411 BJD94_16835 94400f37be6ec7c87ccad85e932849d5 274 SUPERFAMILY SSF46785 2 79 3.02E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_16835 94400f37be6ec7c87ccad85e932849d5 274 Gene3D G3DSA:1.10.10.10 2 83 4.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_16835 94400f37be6ec7c87ccad85e932849d5 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD94_18450 66c7d37fa0607077ccfa1b89c03f90f5 209 Gene3D G3DSA:1.25.40.10 19 199 2.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_18450 66c7d37fa0607077ccfa1b89c03f90f5 209 Pfam PF13181 Tetratricopeptide repeat 135 153 0.024 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD94_18450 66c7d37fa0607077ccfa1b89c03f90f5 209 SUPERFAMILY SSF48452 58 179 4.74E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD94_14385 ccb937d4cf1ae63fb5bc98d23d7bca53 292 Pfam PF01136 Peptidase family U32 82 236 2.4E-12 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BJD94_11995 75af763dc66e22ba3b82ef4e2dc5c096 308 Gene3D G3DSA:3.40.50.720 92 277 1.0E-96 T 14-10-2018 BJD94_11995 75af763dc66e22ba3b82ef4e2dc5c096 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 2.3E-45 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD94_11995 75af763dc66e22ba3b82ef4e2dc5c096 308 SUPERFAMILY SSF51735 94 274 1.29E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD94_11995 75af763dc66e22ba3b82ef4e2dc5c096 308 SUPERFAMILY SSF52283 9 115 1.79E-6 T 14-10-2018 BJD94_11995 75af763dc66e22ba3b82ef4e2dc5c096 308 Gene3D G3DSA:3.40.50.720 32 300 1.0E-96 T 14-10-2018 BJD94_15305 4c35fa4f4c679df3f900c7c22640d458 478 Pfam PF13751 Transposase DDE domain 324 442 1.9E-27 T 14-10-2018 IPR025668 Transposase DDE domain BJD94_15305 4c35fa4f4c679df3f900c7c22640d458 478 Pfam PF05598 Transposase domain (DUF772) 52 125 5.5E-22 T 14-10-2018 IPR008490 Transposase InsH, N-terminal BJD94_19520 2a6d5ee06149c32990a0656fa141553b 393 Gene3D G3DSA:1.20.1250.20 200 386 1.8E-15 T 14-10-2018 BJD94_19520 2a6d5ee06149c32990a0656fa141553b 393 Pfam PF07690 Major Facilitator Superfamily 16 345 8.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD94_19520 2a6d5ee06149c32990a0656fa141553b 393 SUPERFAMILY SSF103473 7 378 4.71E-36 T 14-10-2018 IPR036259 MFS transporter superfamily BJD94_19520 2a6d5ee06149c32990a0656fa141553b 393 Gene3D G3DSA:1.20.1250.20 3 196 4.3E-6 T 14-10-2018 BJD94_05625 40c8ed29a335a1cf31f4039c15ead935 227 SUPERFAMILY SSF52540 47 157 1.06E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_05625 40c8ed29a335a1cf31f4039c15ead935 227 PIRSF PIRSF037290 1 227 6.0E-79 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 BJD94_05625 40c8ed29a335a1cf31f4039c15ead935 227 Gene3D G3DSA:3.40.50.300 51 156 2.3E-27 T 14-10-2018 BJD94_07950 d79e54185cdf99b18941f05ef0664972 519 Pfam PF03806 AbgT putative transporter family 19 517 1.0E-211 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 BJD94_19230 e860c84e1788e38c2bf84c175570b03e 295 SUPERFAMILY SSF103481 190 283 1.23E-14 T 14-10-2018 BJD94_19230 e860c84e1788e38c2bf84c175570b03e 295 SUPERFAMILY SSF103481 40 141 2.88E-10 T 14-10-2018 BJD94_19230 e860c84e1788e38c2bf84c175570b03e 295 Pfam PF00892 EamA-like transporter family 149 279 6.9E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_19230 e860c84e1788e38c2bf84c175570b03e 295 Pfam PF00892 EamA-like transporter family 8 137 1.5E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_18135 2a3c69d9cbb1cb76eba07adcad2ccbbe 339 Pfam PF01757 Acyltransferase family 6 328 1.3E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD94_10975 f73141a03b67c19413df8f79b629aed2 264 Pfam PF07070 SpoOM protein 4 220 4.1E-77 T 14-10-2018 IPR009776 Sporulation stage 0, protein M BJD94_15160 46b76ff0193a308d8852a0ed1871902e 377 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 12 371 1.0E-76 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA BJD94_15160 46b76ff0193a308d8852a0ed1871902e 377 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 144 8.5E-30 T 14-10-2018 IPR010657 ImpA, N-terminal BJD94_05060 bc256e9e11a9638293e5ab1cc093e36d 541 Pfam PF08811 Protein of unknown function (DUF1800) 43 534 2.3E-98 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 BJD94_16200 2e3deaf34a3facc0cc07e35c89383571 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 1.0E-45 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BJD94_16200 2e3deaf34a3facc0cc07e35c89383571 104 PIRSF PIRSF028773 1 104 6.3E-46 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BJD94_16200 2e3deaf34a3facc0cc07e35c89383571 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 3.5E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BJD94_16200 2e3deaf34a3facc0cc07e35c89383571 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.397 T 14-10-2018 IPR007458 Protein of unknown function DUF496 BJD94_00205 da3b8fb673afab6baf65e36d87ac8aca 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.2E-136 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 BJD94_12865 6f2e7ca0da183b37fb80652f1c1b528d 403 Pfam PF01103 Surface antigen 118 376 1.5E-10 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD94_12865 6f2e7ca0da183b37fb80652f1c1b528d 403 Gene3D G3DSA:2.40.160.50 123 400 1.5E-15 T 14-10-2018 BJD94_21340 9a5a0efd78b7c34a25b30c32e94127c9 543 Gene3D G3DSA:3.40.50.300 1 336 7.4E-17 T 14-10-2018 BJD94_21340 9a5a0efd78b7c34a25b30c32e94127c9 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 2.0E-153 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 BJD94_21340 9a5a0efd78b7c34a25b30c32e94127c9 543 SUPERFAMILY SSF52540 1 323 4.28E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_10890 2d1d046f0b8877353888c71d690cb33c 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 6.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_10890 2d1d046f0b8877353888c71d690cb33c 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 129 1.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat BJD94_10890 2d1d046f0b8877353888c71d690cb33c 184 SUPERFAMILY SSF51161 4 175 1.8E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD94_10890 2d1d046f0b8877353888c71d690cb33c 184 Gene3D G3DSA:2.160.10.10 1 183 9.2E-56 T 14-10-2018 BJD94_02115 042dfe3b1b73cbc82709a5e5b4d3beeb 319 Pfam PF14321 Domain of unknown function (DUF4382) 29 176 2.2E-24 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 BJD94_10165 ad8e6ada503c1099b25be58eb81fa4f9 611 Pfam PF00884 Sulfatase 248 527 2.2E-32 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD94_10165 ad8e6ada503c1099b25be58eb81fa4f9 611 Gene3D G3DSA:3.40.720.10 237 562 2.9E-58 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD94_10165 ad8e6ada503c1099b25be58eb81fa4f9 611 Pfam PF11893 Domain of unknown function (DUF3413) 3 239 1.2E-55 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal BJD94_10165 ad8e6ada503c1099b25be58eb81fa4f9 611 PIRSF PIRSF004950 1 611 1.8E-226 T 14-10-2018 IPR012159 Inner membrane protein YejM BJD94_10165 ad8e6ada503c1099b25be58eb81fa4f9 611 SUPERFAMILY SSF53649 245 594 1.01E-57 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD94_05100 dfb1d9644657992a681baab7a66794e2 566 SUPERFAMILY SSF161098 298 537 1.96E-21 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05100 dfb1d9644657992a681baab7a66794e2 566 SUPERFAMILY SSF161098 5 274 4.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05100 dfb1d9644657992a681baab7a66794e2 566 Gene3D G3DSA:1.10.3720.10 2 279 2.0E-16 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05100 dfb1d9644657992a681baab7a66794e2 566 Gene3D G3DSA:1.10.3720.10 297 547 8.3E-17 T 14-10-2018 IPR035906 MetI-like superfamily BJD94_05190 623bc45e72dcc0da039cd2651e9ee42c 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.5E-95 T 14-10-2018 IPR014319 Phage shock protein, PspA BJD94_05190 623bc45e72dcc0da039cd2651e9ee42c 223 Pfam PF04012 PspA/IM30 family 2 217 3.8E-60 T 14-10-2018 IPR007157 PspA/IM30 BJD94_11270 c34c6c4d3386e1555f863f51257b4b4e 176 SUPERFAMILY SSF52218 4 174 7.26E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_11270 c34c6c4d3386e1555f863f51257b4b4e 176 Gene3D G3DSA:3.40.50.360 3 176 1.5E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily BJD94_11270 c34c6c4d3386e1555f863f51257b4b4e 176 Pfam PF12724 Flavodoxin domain 6 154 4.6E-50 T 14-10-2018 IPR026816 Flavodoxin domain BJD94_03075 e6745f54390d1bc11f3150bfc2825fcd 271 SUPERFAMILY SSF54506 20 260 1.47E-54 T 14-10-2018 BJD94_03075 e6745f54390d1bc11f3150bfc2825fcd 271 Gene3D G3DSA:3.10.310.10 23 264 7.9E-61 T 14-10-2018 BJD94_03075 e6745f54390d1bc11f3150bfc2825fcd 271 Gene3D G3DSA:3.10.310.10 131 262 7.9E-61 T 14-10-2018 BJD94_03075 e6745f54390d1bc11f3150bfc2825fcd 271 Pfam PF02567 Phenazine biosynthesis-like protein 24 240 2.5E-32 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD94_03075 e6745f54390d1bc11f3150bfc2825fcd 271 PIRSF PIRSF016184 16 271 1.9E-61 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD94_15780 e4f45a87712d0f007c4a059aaf2eb0e1 210 Pfam PF01810 LysE type translocator 16 205 3.5E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_15780 e4f45a87712d0f007c4a059aaf2eb0e1 210 PIRSF PIRSF006324 1 209 1.9E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_07040 1b729dd4f4be99cff4b0e590f6138b03 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 7.4E-18 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 BJD94_07620 daae37e2002df553250e1845c6e26c58 89 SUPERFAMILY SSF81301 1 89 4.25E-35 T 14-10-2018 BJD94_07620 daae37e2002df553250e1845c6e26c58 89 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 2 88 1.5E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BJD94_07620 daae37e2002df553250e1845c6e26c58 89 Pfam PF02410 Ribosomal silencing factor during starvation 2 88 9.8E-27 T 14-10-2018 BJD94_07620 daae37e2002df553250e1845c6e26c58 89 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 89 19.414 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BJD94_07620 daae37e2002df553250e1845c6e26c58 89 Gene3D G3DSA:3.30.460.10 1 89 7.4E-35 T 14-10-2018 BJD94_20435 c32d76790d55b67916b9997ac9dc1628 122 Pfam PF07238 PilZ domain 7 104 3.6E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 BJD94_18190 6d02d1e811dd91c40caa12a96de4b67b 287 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 75 205 1.3E-43 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 BJD94_17435 f6b241a260440837c0469fa2d925ad26 404 Pfam PF02687 FtsX-like permease family 305 396 2.7E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_17435 f6b241a260440837c0469fa2d925ad26 404 Pfam PF12704 MacB-like periplasmic core domain 19 238 3.9E-23 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_00735 6a2f991718a661bf24b9459691a7fabc 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 5.0E-20 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BJD94_00735 6a2f991718a661bf24b9459691a7fabc 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.4E-16 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BJD94_09090 6a10b66e06d1b44deb1373618a760067 194 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 15 193 2.5E-53 T 14-10-2018 IPR016476 SH3 domain protein BJD94_09090 6a10b66e06d1b44deb1373618a760067 194 Pfam PF08239 Bacterial SH3 domain 23 73 6.7E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BJD94_09090 6a10b66e06d1b44deb1373618a760067 194 PIRSF PIRSF006158 1 194 1.4E-71 T 14-10-2018 IPR016476 SH3 domain protein BJD94_09090 6a10b66e06d1b44deb1373618a760067 194 SMART SM00287 11 77 1.2E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type BJD94_09090 6a10b66e06d1b44deb1373618a760067 194 Gene3D G3DSA:2.30.30.40 21 77 1.2E-7 T 14-10-2018 BJD94_20720 532a96363060ffa21de9a3c9c20556b8 262 SUPERFAMILY SSF53474 9 246 1.1E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_20720 532a96363060ffa21de9a3c9c20556b8 262 Pfam PF01764 Lipase (class 3) 60 204 9.0E-28 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 BJD94_20720 532a96363060ffa21de9a3c9c20556b8 262 Gene3D G3DSA:3.40.50.1820 6 236 3.9E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_21740 e0cb44669b69ba15ff6eb8ac5f9229c8 141 Pfam PF11756 Nitrous oxide-stimulated promoter 19 120 2.4E-45 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA BJD94_21740 e0cb44669b69ba15ff6eb8ac5f9229c8 141 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 22 110 1.0E-47 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA BJD94_08600 b2d7434b0654488183b8f6f4da56713c 245 Pfam PF01925 Sulfite exporter TauE/SafE 2 243 3.8E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_08825 f98d8b6f81b15423f49a56e661c6178a 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 5.7E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD94_07055 9008327b9e3737d21654c13bbffb3e35 149 SUPERFAMILY SSF46785 5 135 2.05E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD94_07055 9008327b9e3737d21654c13bbffb3e35 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.3E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BJD94_07055 9008327b9e3737d21654c13bbffb3e35 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD94_07055 9008327b9e3737d21654c13bbffb3e35 149 Gene3D G3DSA:3.30.1490.190 85 141 1.2E-22 T 14-10-2018 BJD94_05800 283cf0281132e8276d534e9baeb1077c 145 Gene3D G3DSA:1.10.8.640 35 119 3.0E-32 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BJD94_05800 283cf0281132e8276d534e9baeb1077c 145 Pfam PF03918 Cytochrome C biogenesis protein 35 143 2.3E-41 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BJD94_05800 283cf0281132e8276d534e9baeb1077c 145 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 12 143 7.5E-59 T 14-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF BJD94_21695 442366b6ea25c50a85783999959e7b60 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.2E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 BJD94_21500 143206ca76899a7559fe347615d995ec 195 Pfam PF13689 Domain of unknown function (DUF4154) 53 185 1.3E-24 T 14-10-2018 IPR025293 YfiR-like BJD94_04825 abe219ad84ce7af7f770aded655bfc40 123 Pfam PF03788 LrgA family 23 114 6.6E-26 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 BJD94_19695 6bcf4aa5c65114f4f0984d66b37a63b2 156 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 2.5E-34 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 BJD94_18345 0cf0868dc283c8ca3ab4283f812babe7 195 Pfam PF01810 LysE type translocator 17 188 1.1E-14 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_19275 522deff07c8d98dce8b589f37b72487b 307 SUPERFAMILY SSF103481 41 139 1.57E-13 T 14-10-2018 BJD94_19275 522deff07c8d98dce8b589f37b72487b 307 SUPERFAMILY SSF103481 182 292 1.44E-7 T 14-10-2018 BJD94_19275 522deff07c8d98dce8b589f37b72487b 307 Pfam PF00892 EamA-like transporter family 7 136 5.6E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_19275 522deff07c8d98dce8b589f37b72487b 307 Pfam PF00892 EamA-like transporter family 156 290 6.6E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD94_08670 5d78d52218a78d932dbf4765c49421bb 422 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 1 398 2.0E-136 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BJD94_08670 5d78d52218a78d932dbf4765c49421bb 422 Pfam PF05525 Branched-chain amino acid transport protein 1 411 2.1E-149 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BJD94_16690 92413deaa4f99911663ca95edc79e92d 142 SUPERFAMILY SSF50630 6 140 8.25E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_16690 92413deaa4f99911663ca95edc79e92d 142 Gene3D G3DSA:2.40.70.10 3 133 3.2E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily BJD94_16690 92413deaa4f99911663ca95edc79e92d 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 139 2.0E-28 T 14-10-2018 BJD94_05235 c8c8e01ff3afb2fcf8c1d5670bf5a712 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 6.9E-35 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 BJD94_04925 5524d5b418b3f890b40661967da3ebef 165 Pfam PF00072 Response regulator receiver domain 6 126 4.4E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04925 5524d5b418b3f890b40661967da3ebef 165 SUPERFAMILY SSF52172 1 141 1.01E-19 T 14-10-2018 IPR011006 CheY-like superfamily BJD94_04925 5524d5b418b3f890b40661967da3ebef 165 SMART SM00448 4 125 4.0E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD94_04925 5524d5b418b3f890b40661967da3ebef 165 Gene3D G3DSA:3.40.50.2300 3 143 1.2E-17 T 14-10-2018 BJD94_05085 0fb55bba50fb54ea033f70d256bd231a 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.4E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 BJD94_09675 98ebdf8a56301fbeef5e4fc912b0e101 419 Pfam PF02687 FtsX-like permease family 317 410 7.6E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_09675 98ebdf8a56301fbeef5e4fc912b0e101 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 8.0E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_01175 10377ac84a44709b06f4158c46e2f2d1 510 Pfam PF04293 SpoVR like protein 17 447 8.0E-178 T 14-10-2018 IPR007390 Sporulation stage V, protein R BJD94_16530 77ba5322ec1176fcec95c83b94bb6991 281 Pfam PF00924 Mechanosensitive ion channel 57 179 2.6E-16 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD94_16530 77ba5322ec1176fcec95c83b94bb6991 281 SUPERFAMILY SSF50182 96 169 6.21E-11 T 14-10-2018 IPR010920 LSM domain superfamily BJD94_16530 77ba5322ec1176fcec95c83b94bb6991 281 Gene3D G3DSA:2.30.30.60 112 168 2.0E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD94_13895 d0c927707e7f9b282758a7ae24c663a7 153 Pfam PF09335 SNARE associated Golgi protein 54 148 5.4E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein BJD94_09720 e0e4c0d0c96e062c7487308fe0573440 187 Gene3D G3DSA:2.60.120.10 3 139 2.1E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold BJD94_09720 e0e4c0d0c96e062c7487308fe0573440 187 SUPERFAMILY SSF51206 18 137 2.75E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD94_01645 038dd7b5f251c391c02345b7f2583549 374 Pfam PF06250 Protein of unknown function (DUF1016) 17 357 5.5E-114 T 14-10-2018 IPR009362 Protein of unknown function DUF1016 BJD94_07905 79202ac11e3c0feaffcd04c755803f87 352 SUPERFAMILY SSF53187 20 318 4.3E-76 T 14-10-2018 BJD94_07905 79202ac11e3c0feaffcd04c755803f87 352 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 7.6E-72 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_07905 79202ac11e3c0feaffcd04c755803f87 352 PIRSF PIRSF039012 4 325 1.3E-90 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD94_07905 79202ac11e3c0feaffcd04c755803f87 352 Gene3D G3DSA:3.40.630.10 16 320 1.4E-91 T 14-10-2018 BJD94_00490 f5d73eb5e83511f118e6eded32f80232 68 Pfam PF11446 Protein of unknown function (DUF2897) 5 57 6.1E-22 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 BJD94_06080 3d76ce1f0679b276cab54f149b44dac0 131 SUPERFAMILY SSF54690 3 129 1.57E-53 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD94_06080 3d76ce1f0679b276cab54f149b44dac0 131 Gene3D G3DSA:3.90.1170.40 1 129 5.2E-52 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD94_06080 3d76ce1f0679b276cab54f149b44dac0 131 Pfam PF02391 MoaE protein 5 99 5.4E-37 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD94_16180 7e1c3b4ac4dbb6f86b98869a6a3ac61c 389 Pfam PF13729 F plasmid transfer operon, TraF, protein 48 306 1.8E-76 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related BJD94_11965 e8a853986f05d084f76ffab258bec287 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 2.4E-54 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BJD94_11965 e8a853986f05d084f76ffab258bec287 164 Gene3D G3DSA:1.20.120.1370 1 157 3.0E-51 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily BJD94_11965 e8a853986f05d084f76ffab258bec287 164 PIRSF PIRSF016548 3 164 6.4E-72 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 BJD94_17200 7ae643eaa6ca884e5a5ca3b15f3d2835 176 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.9E-24 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 BJD94_18655 4f4beb8d393240243657d8162c6e4adb 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.4E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BJD94_13465 21ed67d6dc8bdaf6bb1575aa79d74d87 143 Gene3D G3DSA:2.60.40.3340 14 143 4.6E-39 T 14-10-2018 BJD94_13465 21ed67d6dc8bdaf6bb1575aa79d74d87 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.8E-48 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 BJD94_17430 6c7175ddf344e2e34492c3ab57dcca3f 427 Pfam PF02687 FtsX-like permease family 322 420 9.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD94_17430 6c7175ddf344e2e34492c3ab57dcca3f 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 3.7E-24 T 14-10-2018 IPR025857 MacB-like periplasmic core domain BJD94_09995 39e02648a54162fb65598dbe4c9aa1c6 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 66 2.4E-5 T 14-10-2018 BJD94_09995 39e02648a54162fb65598dbe4c9aa1c6 126 Gene3D G3DSA:3.40.50.1000 1 126 2.6E-41 T 14-10-2018 IPR023214 HAD superfamily BJD94_09995 39e02648a54162fb65598dbe4c9aa1c6 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 125 2.1E-64 T 14-10-2018 IPR010039 Capsule biosynthesis phosphatase BJD94_09995 39e02648a54162fb65598dbe4c9aa1c6 126 SUPERFAMILY SSF56784 1 107 6.74E-22 T 14-10-2018 IPR036412 HAD-like superfamily BJD94_16760 9de848b4333bad8dfdcef85bc14f7294 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.2E-145 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 BJD94_04560 a7ab30d95b27b90646ece5651f2db1c5 171 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 26 162 2.3E-18 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 BJD94_03510 d1a175a32a91f08bb5e222cd83de9ee3 165 Pfam PF11066 Protein of unknown function (DUF2867) 14 157 8.4E-41 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 BJD94_07160 db590d081cb3428f0dc7eff78188b41a 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 3.8E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 BJD94_18010 aaf2a0fabdb1a18cfdb53b3f3e9ef693 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 6.0E-35 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 BJD94_14110 1e893a962e7c4d2a202065adcd978d6a 450 PIRSF PIRSF002746 1 450 1.6E-116 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BJD94_14110 1e893a962e7c4d2a202065adcd978d6a 450 Pfam PF02447 GntP family permease 1 448 1.4E-97 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BJD94_11325 de43b34ff6b61637187968dff51134b1 83 Pfam PF04380 Membrane fusogenic activity 1 78 2.4E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity BJD94_03890 8d86b7339dd211beb5c5c61049b27894 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 5.1E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD94_03890 8d86b7339dd211beb5c5c61049b27894 65 PIRSF PIRSF036704 1 65 4.7E-33 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing BJD94_03890 8d86b7339dd211beb5c5c61049b27894 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 2.3E-28 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing BJD94_17240 54ffa31cc1e686d1592f31be2aba6ac2 433 SUPERFAMILY SSF53474 33 421 6.29E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_17240 54ffa31cc1e686d1592f31be2aba6ac2 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD94_17240 54ffa31cc1e686d1592f31be2aba6ac2 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD94_17240 54ffa31cc1e686d1592f31be2aba6ac2 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 140 154 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD94_17240 54ffa31cc1e686d1592f31be2aba6ac2 433 Pfam PF00561 alpha/beta hydrolase fold 51 238 2.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD94_20420 24a289b8d99ac8b2848bb023cc81abc4 423 Pfam PF02308 MgtC family 17 141 9.0E-19 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BJD94_20420 24a289b8d99ac8b2848bb023cc81abc4 423 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 1.7E-64 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 BJD94_21680 cafb07259001dca4e8923d06c1e96443 155 Pfam PF04143 Sulphur transport 46 140 2.0E-6 T 14-10-2018 IPR007272 Sulphur transport domain BJD94_16965 ba3bae04469dbe944a8eaa223769502c 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.0E-15 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 BJD94_21590 004f0bc36ccadcf5a53f85ff42a3ad19 331 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 330 4.4E-150 T 14-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain BJD94_03535 210f33f45c18cafa4f2023cc7d1820a2 236 Pfam PF13643 Domain of unknown function (DUF4145) 112 198 1.9E-9 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 BJD94_11400 75ece41a5c82581b0f53aa58af7f33b2 314 SUPERFAMILY SSF110997 73 144 8.37E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD94_11400 75ece41a5c82581b0f53aa58af7f33b2 314 Pfam PF05036 Sporulation related domain 74 143 4.2E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD94_10330 b7175c14f998da5db6f124ae2bb03180 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 168 4.2E-20 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_03165 f348eba10a07ba65c11df37d557fa598 77 Pfam PF14110 Domain of unknown function (DUF4282) 2 73 9.6E-14 T 14-10-2018 IPR025557 Protein of unknown function DUF4282 BJD94_02705 0b3acf59b6d5d47bfcd1aaf390af8d46 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 28 165 9.7E-19 T 14-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 BJD94_16900 895652e6ef748da6d988153aaea29e22 249 Pfam PF07670 Nucleoside recognition 85 179 2.4E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_15145 0c1f1551c9f9811b4c87eda6fbbd99c2 535 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 84 529 2.0E-135 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_15145 0c1f1551c9f9811b4c87eda6fbbd99c2 535 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 99 529 7.0E-162 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_16410 be1fb068f04503e29b3947030b1d7854 412 Gene3D G3DSA:1.10.4160.10 3 409 1.8E-46 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily BJD94_16410 be1fb068f04503e29b3947030b1d7854 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 5.7E-64 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 BJD94_09225 f788e8cde115f57202e753123d6e2af1 149 Gene3D G3DSA:3.10.450.430 1 141 5.0E-26 T 14-10-2018 BJD94_09225 f788e8cde115f57202e753123d6e2af1 149 Pfam PF10980 Protein of unknown function (DUF2787) 15 138 1.0E-32 T 14-10-2018 IPR021248 Protein of unknown function DUF2787 BJD94_10780 d5288a1aa4178f75531a87f21cfc276c 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.7E-22 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane BJD94_02280 7b27b660a0c81880fc8ff17f582f9a8f 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.4E-54 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 BJD94_01550 2a2291f1e2f652b9b52712a86d256128 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 2.4E-12 T 14-10-2018 IPR007140 Protein of unknown function DUF350 BJD94_01550 2a2291f1e2f652b9b52712a86d256128 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 5.3E-12 T 14-10-2018 IPR007140 Protein of unknown function DUF350 BJD94_03255 907b7811efe05c4259bb8b999ef1cb28 171 Pfam PF12158 Protein of unknown function (DUF3592) 9 157 5.5E-16 T 14-10-2018 IPR021994 Protein of unknown function DUF3592 BJD94_17890 b5ca9b224385b86469a47669ee9a869b 557 Pfam PF03961 Flagellar Assembly Protein A 81 544 1.3E-124 T 14-10-2018 IPR005646 Flagellar assembly protein A BJD94_13145 e7d89a0c8ee64009af1fc9c9fdee5afb 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 2.4E-37 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BJD94_13145 e7d89a0c8ee64009af1fc9c9fdee5afb 162 Pfam PF04093 rod shape-determining protein MreD 9 154 1.1E-39 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BJD94_13145 e7d89a0c8ee64009af1fc9c9fdee5afb 162 PIRSF PIRSF018472 1 162 2.4E-41 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type BJD94_17135 d853d21c7201f160c280c3a6c003774b 151 Gene3D G3DSA:3.40.630.30 2 151 3.8E-43 T 14-10-2018 BJD94_17135 d853d21c7201f160c280c3a6c003774b 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 129 6.5E-15 T 14-10-2018 IPR000182 GNAT domain BJD94_17135 d853d21c7201f160c280c3a6c003774b 151 SUPERFAMILY SSF55729 10 146 1.3E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_07190 f734d1c913355e7f554b22c19d51a433 122 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.5E-14 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 BJD94_01785 aad4531297b77dc4f8a5a8b41c68f313 150 Pfam PF04217 Protein of unknown function, DUF412 9 146 8.5E-60 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 BJD94_01785 aad4531297b77dc4f8a5a8b41c68f313 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 37.537 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 BJD94_19640 fa3e3ee16e0003e5a0e2f5fd038095e5 186 Pfam PF07603 Protein of unknown function (DUF1566) 42 183 7.5E-21 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 BJD94_10545 4187ca3b704a36f55b1e64efde981f7d 178 Pfam PF13511 Domain of unknown function (DUF4124) 9 57 6.7E-11 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 BJD94_07580 3abeddae2116bc9bd4052ca45e9e06e2 370 SUPERFAMILY SSF52540 119 320 5.29E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_07580 3abeddae2116bc9bd4052ca45e9e06e2 370 Gene3D G3DSA:3.40.50.300 117 323 4.7E-74 T 14-10-2018 BJD94_07580 3abeddae2116bc9bd4052ca45e9e06e2 370 Pfam PF02562 PhoH-like protein 120 323 7.2E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 BJD94_06775 2882bc84ea1bfae38090e67745fc60bc 202 Pfam PF11659 Protein of unknown function (DUF3261) 51 194 1.3E-33 T 14-10-2018 IPR021675 Protein of unknown function DUF3261 BJD94_10265 a1d5d5e15d19108e631e14a8cfa0bd6e 87 Pfam PF11907 Domain of unknown function (DUF3427) 25 80 8.6E-7 T 14-10-2018 IPR021835 Protein of unknown function DUF3427 BJD94_04945 65b59eff67ea57f93df851cecad0bd32 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-87 T 14-10-2018 IPR005642 Lysine exporter LysO BJD94_04945 65b59eff67ea57f93df851cecad0bd32 301 Pfam PF03956 Lysine exporter LysO 112 297 2.3E-52 T 14-10-2018 IPR005642 Lysine exporter LysO BJD94_01795 916d2d8eddb0dfcf471477fe7379e7ee 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 270 2.0E-25 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BJD94_08075 2d1d50a6258ce87709974d2cf6e7238f 375 SUPERFAMILY SSF56059 120 310 1.06E-7 T 14-10-2018 BJD94_18060 7f5f1facbe2a95f3c8c5db9cf7841fc1 263 Pfam PF14247 Putative metallopeptidase 36 258 2.9E-66 T 14-10-2018 IPR025644 Putative metallopeptidase BJD94_05040 75190119e529a1ef6917fb1da8b49856 129 Gene3D G3DSA:3.10.450.40 58 120 8.9E-8 T 14-10-2018 BJD94_14565 d246840838ef96dfae996ec611f05f85 416 Gene3D G3DSA:3.40.50.300 165 401 2.3E-42 T 14-10-2018 BJD94_14565 d246840838ef96dfae996ec611f05f85 416 SUPERFAMILY SSF52540 166 402 4.76E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_01110 2688c6ed73a5130063f30750263b3cbd 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 254 5.3E-71 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV BJD94_21775 831e380d53a20e3c278d02b4ea074b80 185 Pfam PF01618 MotA/TolQ/ExbB proton channel family 65 178 2.0E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD94_21400 aecd928319fdc7435ecdb7d396a098ea 78 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.3E-35 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 BJD94_21085 a2306508b25165ac28d61a0cee8b4275 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 2.2E-30 T 14-10-2018 IPR032036 Protein of unknown function DUF5062 BJD94_21085 a2306508b25165ac28d61a0cee8b4275 86 Gene3D G3DSA:1.20.120.1930 1 86 2.1E-39 T 14-10-2018 BJD94_03370 fc0957f14072fd4c90e28893e916e586 304 Pfam PF07859 alpha/beta hydrolase fold 77 282 7.9E-60 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BJD94_03370 fc0957f14072fd4c90e28893e916e586 304 Gene3D G3DSA:3.40.50.1820 2 304 2.0E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_03370 fc0957f14072fd4c90e28893e916e586 304 SUPERFAMILY SSF53474 58 302 2.73E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD94_00825 304adbe5df022749a3ebe909cff4899d 207 Pfam PF03458 UPF0126 domain 5 76 1.0E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD94_00825 304adbe5df022749a3ebe909cff4899d 207 Pfam PF03458 UPF0126 domain 92 163 9.6E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD94_04270 0a57101c4bbd9bc8db012985e849570d 477 Pfam PF13807 G-rich domain on putative tyrosine kinase 362 442 1.3E-6 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain BJD94_15880 3fc6ba0290898e202c1e8e30597a9981 505 Pfam PF00474 Sodium:solute symporter family 34 417 5.8E-46 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD94_15880 3fc6ba0290898e202c1e8e30597a9981 505 Gene3D G3DSA:1.20.1730.10 8 484 4.2E-72 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD94_19895 a61766ec7de92db9f3f0b614f5875fb6 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 5.7E-30 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 BJD94_19895 a61766ec7de92db9f3f0b614f5875fb6 99 Gene3D G3DSA:3.30.70.860 1 99 8.7E-40 T 14-10-2018 IPR035571 UPF0234-like, C-terminal BJD94_18265 e491d3a5dc5bf4946f834d52e2577aab 146 PIRSF PIRSF015875 1 146 3.4E-44 T 14-10-2018 IPR007418 Protein of unknown function DUF474 BJD94_00520 66f69692fdf8210aed0dcbb347e785ea 120 Pfam PF11169 Protein of unknown function (DUF2956) 11 116 7.4E-44 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 BJD94_13720 cd37187c33056bad245c8814a1e4ec77 137 SUPERFAMILY SSF53850 14 125 3.26E-8 T 14-10-2018 BJD94_21565 85ec9b24ee374825855838eb7a17ab7f 464 SUPERFAMILY SSF52467 291 464 1.12E-79 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD94_21565 85ec9b24ee374825855838eb7a17ab7f 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 9.3E-202 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD94_21565 85ec9b24ee374825855838eb7a17ab7f 464 PIRSF PIRSF000204 1 464 4.5E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 BJD94_21565 85ec9b24ee374825855838eb7a17ab7f 464 Gene3D G3DSA:3.40.50.1220 288 464 1.4E-89 T 14-10-2018 BJD94_14560 b5c573d3f23b5e4eeefe61c49ba9346a 171 Pfam PF07811 TadE-like protein 13 55 2.3E-8 T 14-10-2018 IPR012495 TadE-like BJD94_20590 892cf1a5144bef27478fef2f35c74e8d 182 SUPERFAMILY SSF55729 3 155 2.74E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD94_20590 892cf1a5144bef27478fef2f35c74e8d 182 Gene3D G3DSA:3.40.630.30 4 169 1.3E-25 T 14-10-2018 BJD94_20590 892cf1a5144bef27478fef2f35c74e8d 182 Pfam PF00583 Acetyltransferase (GNAT) family 45 138 2.3E-15 T 14-10-2018 IPR000182 GNAT domain BJD94_18355 3f2584c16f9c114d6ba6701ed56873f5 583 SUPERFAMILY SSF58113 354 498 3.66E-7 T 14-10-2018 BJD94_18355 3f2584c16f9c114d6ba6701ed56873f5 583 Gene3D G3DSA:1.20.120.20 358 502 9.7E-11 T 14-10-2018 BJD94_01265 bff80c452c2b14a994c848c02b0848a5 55 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.6E-23 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related BJD94_17145 cd9f826d9cf92d7c3fd337d3d0345bd8 65 Pfam PF04400 (Na+)-NQR maturation NqrM 22 61 3.7E-18 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM BJD94_19680 8d913a0c439ade828c6a8ee1b61d2982 543 Pfam PF13584 Oxygen tolerance 15 467 6.3E-78 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD BJD94_12725 5015de4fd22001168da8126b83c253cd 297 SUPERFAMILY SSF51730 22 294 8.04E-96 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like BJD94_12725 5015de4fd22001168da8126b83c253cd 297 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.3E-101 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD94_12725 5015de4fd22001168da8126b83c253cd 297 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.2E-102 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 BJD94_12725 5015de4fd22001168da8126b83c253cd 297 Gene3D G3DSA:3.20.20.220 1 297 7.8E-113 T 14-10-2018 BJD94_17615 8af52a4edfc9008078d6d6f908ccce10 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.5E-36 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 BJD94_10750 9a872165ddcf4ad450d73fc9549b4864 104 Pfam PF12305 Protein of unknown function (DUF3630) 8 100 1.8E-37 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 BJD94_10030 8083b08ba908c1f9c3853d9f67421163 243 SUPERFAMILY SSF159270 32 239 6.02E-57 T 14-10-2018 IPR023373 YmcC-like superfamily BJD94_10030 8083b08ba908c1f9c3853d9f67421163 243 Gene3D G3DSA:2.40.360.10 31 241 5.9E-62 T 14-10-2018 IPR023373 YmcC-like superfamily BJD94_10030 8083b08ba908c1f9c3853d9f67421163 243 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 27 235 3.3E-61 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB BJD94_20500 6e3d46ab91186e93065c8dc3fb230157 491 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 486 6.7E-136 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BJD94_03160 2cda1c95140dff22a8595780eeabb010 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 1.6E-28 T 14-10-2018 IPR009956 Post-segregation antitoxin CcdA BJD94_05440 c4271bd4327203694f9d38c5e4420203 171 Pfam PF11086 Protein of unknown function (DUF2878) 4 149 2.9E-33 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 BJD94_00765 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 117 134 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD94_00765 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 154 171 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD94_00765 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 66 82 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD94_00765 94ceeaaeeaa4e53570c7e02108318ad0 262 PRINTS PR01805 VacJ lipoprotein signature 48 61 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD94_00765 94ceeaaeeaa4e53570c7e02108318ad0 262 Pfam PF04333 MlaA lipoprotein 48 238 1.1E-62 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD94_21265 3321e1535750a99582d73f6f5de2a920 434 Pfam PF00294 pfkB family carbohydrate kinase 139 294 2.1E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB BJD94_21265 3321e1535750a99582d73f6f5de2a920 434 SUPERFAMILY SSF53613 34 417 7.89E-45 T 14-10-2018 IPR029056 Ribokinase-like BJD94_01330 4a9524b41d81829e1b30eaae9327cdd0 153 Pfam PF05433 Glycine zipper 2TM domain 58 92 5.6E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BJD94_00435 1df33b630047fe55fe157bca3e3879e6 403 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 4.6E-67 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 BJD94_07195 57ee087366451818aeb5461e8e4522c7 449 Gene3D G3DSA:2.40.160.10 51 448 2.1E-14 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_02480 70275cd07db56027fdab7e6e83599948 262 Gene3D G3DSA:1.10.357.10 27 213 9.9E-13 T 14-10-2018 BJD94_02480 70275cd07db56027fdab7e6e83599948 262 SUPERFAMILY SSF46689 28 86 2.0E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD94_02480 70275cd07db56027fdab7e6e83599948 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 81 1.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD94_00960 b7940d26b0484333510f6c46c508a6e4 97 Gene3D G3DSA:3.30.70.100 1 95 6.2E-26 T 14-10-2018 BJD94_00960 b7940d26b0484333510f6c46c508a6e4 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 4.2E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BJD94_00960 b7940d26b0484333510f6c46c508a6e4 97 SUPERFAMILY SSF54909 1 92 5.37E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_03155 4b2ba54c59de5bb51d6ddd8154812640 105 Pfam PF01845 CcdB protein 3 104 3.2E-35 T 14-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BJD94_03155 4b2ba54c59de5bb51d6ddd8154812640 105 Gene3D G3DSA:2.30.30.110 1 105 1.7E-40 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BJD94_03155 4b2ba54c59de5bb51d6ddd8154812640 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 4.0E-38 T 14-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BJD94_03155 4b2ba54c59de5bb51d6ddd8154812640 105 SUPERFAMILY SSF50118 3 105 5.23E-32 T 14-10-2018 BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 Gene3D G3DSA:3.90.10.10 25 141 1.5E-6 T 14-10-2018 BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 SUPERFAMILY SSF48695 14 193 7.37E-29 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 6.9E-5 T 14-10-2018 IPR010177 Doubled CXXCH motif BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 Pfam PF13435 Cytochrome c554 and c-prime 35 88 9.3E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 Gene3D G3DSA:3.90.10.10 142 194 1.1E-5 T 14-10-2018 BJD94_05825 8c9b13bd73e6bcfaf09ab66c9370d113 195 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 43 189 1.2E-65 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 BJD94_01665 d36480803215c83abdce958367d54793 559 Pfam PF04434 SWIM zinc finger 55 89 7.2E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 BJD94_05320 7fa3ca3761f3ea0b9664bfe1de37b504 212 Gene3D G3DSA:3.40.50.620 15 150 1.7E-26 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD94_05320 7fa3ca3761f3ea0b9664bfe1de37b504 212 Pfam PF02698 DUF218 domain 33 145 1.4E-22 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BJD94_16030 967b8c3ee645c9256c3e7993ed0be4c8 71 SUPERFAMILY SSF56349 16 47 2.5E-6 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD94_08060 3c6e00c2d23dffd0b93ef1cbb9592330 145 Pfam PF04945 YHS domain 39 83 5.2E-11 T 14-10-2018 IPR007029 YHS domain BJD94_13575 d051a1d2ad9deaf0716dc96b8b7b05ca 191 Pfam PF01810 LysE type translocator 2 187 8.1E-42 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD94_12255 78f4cb22be2774821133df87d1c91087 317 SUPERFAMILY SSF64182 5 316 9.42E-41 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily BJD94_19325 fe8c587ff89e9755543c425843927d48 471 Pfam PF03929 PepSY-associated TM region 23 408 2.3E-64 T 14-10-2018 IPR005625 PepSY-associated TM protein BJD94_02595 2310216e60375faeedb9eec2230db4eb 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 4.4E-98 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 BJD94_05880 5e26f369b9519a2f6d776c410b3c3573 292 Pfam PF13084 Domain of unknown function (DUF3943) 129 238 1.7E-37 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 BJD94_04760 bce911b154cce0c679f8de2c0cdc3db7 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.4E-9 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BJD94_17050 50cfb1565f9478a38fe7a8a2d2d033de 739 Gene3D G3DSA:2.130.10.10 131 422 8.8E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD94_17050 50cfb1565f9478a38fe7a8a2d2d033de 739 SUPERFAMILY SSF50969 107 449 1.1E-17 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BJD94_17050 50cfb1565f9478a38fe7a8a2d2d033de 739 Pfam PF13449 Esterase-like activity of phytase 460 720 3.8E-46 T 14-10-2018 IPR027372 Phytase-like domain BJD94_00835 755eb45ec53de71c9c4b2fe695b5fd9e 87 Pfam PF08891 YfcL protein 4 84 4.6E-32 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL BJD94_13475 10f401e1337f1fcbaf6cc986feb0a540 185 Pfam PF02325 YGGT family 10 77 3.7E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 BJD94_13475 10f401e1337f1fcbaf6cc986feb0a540 185 Pfam PF02325 YGGT family 109 173 1.9E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 BJD94_05655 2375e8caa3869e1a94ad840b819536f5 392 Gene3D G3DSA:3.40.1090.10 15 122 2.7E-9 T 14-10-2018 BJD94_05655 2375e8caa3869e1a94ad840b819536f5 392 Gene3D G3DSA:3.40.1090.10 133 238 8.7E-7 T 14-10-2018 BJD94_05655 2375e8caa3869e1a94ad840b819536f5 392 SUPERFAMILY SSF52151 25 278 2.62E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD94_05655 2375e8caa3869e1a94ad840b819536f5 392 Pfam PF01734 Patatin-like phospholipase 30 197 3.2E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BJD94_20005 78f15e489a7f1048945afd3161a78499 458 Pfam PF07670 Nucleoside recognition 144 238 1.3E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD94_11105 3a18077caf83a9474063bc9ef919555f 129 Pfam PF03899 ATP synthase I chain 16 111 2.6E-16 T 14-10-2018 IPR005598 ATP synthase protein I BJD94_21195 10fced18039322450d5ff6ebc8ffc78a 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 272 2.3E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD94_21195 10fced18039322450d5ff6ebc8ffc78a 322 SUPERFAMILY SSF56219 2 318 9.81E-35 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_21195 10fced18039322450d5ff6ebc8ffc78a 322 Gene3D G3DSA:3.60.10.10 1 318 4.1E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD94_12645 d11969da059d247e41cfd6114f1338ad 112 Pfam PF11333 Protein of unknown function (DUF3135) 9 89 2.1E-32 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 BJD94_03705 ab450487e09464bfca62dc78b4c83850 77 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 68 1.7E-18 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 BJD94_12640 858c4d71a7e5909033cba45fc16fc7b4 140 Pfam PF05656 Protein of unknown function (DUF805) 8 138 1.6E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 BJD94_03070 dfe576de3d6aafac22a5d49e3b1003e4 315 Pfam PF14088 Domain of unknown function (DUF4268) 175 307 1.8E-26 T 14-10-2018 IPR025364 Domain of unknown function DUF4268 BJD94_04255 3843c4b7bc25b7ca20a7f53f1ddc03d4 453 Pfam PF04932 O-Antigen ligase 240 376 2.0E-18 T 14-10-2018 IPR007016 O-antigen ligase-related BJD94_19370 5f31ae7a9d4de97dbf013db17c1740b9 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 164 3.9E-17 T 14-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 BJD94_18300 0439a75cd2dd69050858a712e377f1e9 322 Pfam PF04018 Domain of unknown function (DUF368) 29 273 6.0E-97 T 14-10-2018 IPR007163 Protein of unknown function DUF368 BJD94_13275 a457fea9586bcbd556978990b5a849da 158 Pfam PF06271 RDD family 9 148 4.6E-21 T 14-10-2018 IPR010432 RDD BJD94_05435 d74ec2f101cb3311445f6b388f0cb04a 187 Pfam PF16036 Chalcone isomerase-like 49 184 1.0E-7 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 BJD94_02360 46e27ae04ba5bc4ef36b3bffe6234762 293 Pfam PF00482 Type II secretion system (T2SS), protein F 153 281 1.3E-20 T 14-10-2018 IPR018076 Type II secretion system F domain BJD94_05305 a8163d0a81bff6de9452bf15461a543d 141 Pfam PF05232 Chlorhexidine efflux transporter 2 63 1.0E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter BJD94_05305 a8163d0a81bff6de9452bf15461a543d 141 Pfam PF05232 Chlorhexidine efflux transporter 69 131 5.0E-23 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter BJD94_15885 3b7fd6497389a1c89c0c1b77baf98046 130 SUPERFAMILY SSF55298 18 126 6.6E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_15885 3b7fd6497389a1c89c0c1b77baf98046 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 2.4E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD94_15885 3b7fd6497389a1c89c0c1b77baf98046 130 Gene3D G3DSA:3.30.1330.40 16 129 1.5E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD94_01555 3b076a52fa3f1aa9d75bce41f7059625 185 Pfam PF06693 Protein of unknown function (DUF1190) 38 182 4.5E-24 T 14-10-2018 IPR009576 Biofilm formation YgiB BJD94_09170 7d331d375b0af05eceb9d54c4892847c 155 Pfam PF13274 Protein of unknown function (DUF4065) 32 122 2.0E-17 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 BJD94_04300 6f7d2311238d0f52b5e6ae1d6bdac481 126 Gene3D G3DSA:3.10.180.10 1 126 2.6E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_04300 6f7d2311238d0f52b5e6ae1d6bdac481 126 SUPERFAMILY SSF54593 1 125 8.86E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD94_01370 59b6336b891533cb3b1299c27948c624 225 Pfam PF09335 SNARE associated Golgi protein 66 181 3.5E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein BJD94_05740 349e526e7e81aee5934d29bbb001f577 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 4.9E-16 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BJD94_09040 1b301ca44461079b9ddaa34ddecf3c6e 149 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.0E-38 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 BJD94_19475 a25485ec51f3a15d592fdd3d9a1ea63b 302 Gene3D G3DSA:3.40.190.10 100 235 1.7E-39 T 14-10-2018 BJD94_19475 a25485ec51f3a15d592fdd3d9a1ea63b 302 Gene3D G3DSA:3.40.190.10 45 280 1.7E-39 T 14-10-2018 BJD94_19475 a25485ec51f3a15d592fdd3d9a1ea63b 302 Pfam PF12849 PBP superfamily domain 45 248 6.5E-10 T 14-10-2018 IPR024370 PBP domain BJD94_19475 a25485ec51f3a15d592fdd3d9a1ea63b 302 SUPERFAMILY SSF53850 44 291 1.06E-35 T 14-10-2018 BJD94_00370 a3ecb1e2c5253443553d8ab9b7d66265 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 399 7.9E-135 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 BJD94_07405 3cd540c6b2c65b6d8280e73ab234bd9d 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 3.2E-14 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 BJD94_20130 55d6df783f01a2cc8f65bc69c0f3a784 104 SUPERFAMILY SSF54909 4 69 1.39E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel BJD94_19995 74fcb53184f2f0d698ef842c17c9e387 342 Pfam PF01757 Acyltransferase family 6 314 7.6E-31 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD94_09240 c086a1a2bb5d0660ba349b25bfe00389 624 SUPERFAMILY SSF50985 126 453 6.54E-18 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II BJD94_07735 a1dcfcd97112354c39f9a63209dc2cbe 258 PIRSF PIRSF029037 1 258 3.6E-117 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 BJD94_07735 a1dcfcd97112354c39f9a63209dc2cbe 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 4.3E-114 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 BJD94_17970 dea86cc869dd53624ae0aec222f89977 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 2.8E-144 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 BJD94_12525 eea15c090e3e106e3509c49ddffa86e1 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.0E-42 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 BJD94_12525 eea15c090e3e106e3509c49ddffa86e1 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 2.0E-28 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 BJD94_01680 a739d2415e27a54cab7033e1e7827d64 176 Pfam PF06042 Nucleotidyltransferase 21 174 4.1E-56 T 14-10-2018 IPR009267 Putative nucleotidyltransferase BJD94_20075 0ee86807fde553b540b3926fff1a3714 365 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 1.1E-116 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 BJD94_04795 7490f2ee6c94b4aceedf435ea5ec60fe 255 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 255 45.291 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD94_04795 7490f2ee6c94b4aceedf435ea5ec60fe 255 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 1.0E-48 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD94_18130 d54e44d999b4885c3a9d734f1999d63e 478 Pfam PF03600 Citrate transporter 46 421 9.5E-53 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BJD94_17080 97ce64a9ce402fd90d97202c2c058a92 174 SUPERFAMILY SSF56524 40 173 6.02E-20 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BJD94_17080 97ce64a9ce402fd90d97202c2c058a92 174 Gene3D G3DSA:3.90.420.10 56 172 2.2E-5 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BJD94_17080 97ce64a9ce402fd90d97202c2c058a92 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 74 148 3.2E-6 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BJD94_09185 abd85cc3d5b427bebcd5e6cd28d46870 212 Pfam PF11726 Inovirus Gp2 31 209 1.1E-41 T 14-10-2018 BJD94_20905 8f67aac25b7a1def877d8635fe896a2b 118 Pfam PF11225 Protein of unknown function (DUF3024) 60 118 1.1E-17 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 BJD94_03715 db766adfaa1a946a326aa22ebab6b03c 306 Pfam PF13737 Transposase DDE domain 19 129 7.4E-43 T 14-10-2018 IPR025668 Transposase DDE domain BJD94_14525 410b1a303cd0f476371d34b8599ca863 167 Pfam PF01478 Type IV leader peptidase family 2 107 3.6E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BJD94_10790 3a9f7660029129a3ed1e874ece9ec5c3 257 Pfam PF09836 Putative DNA-binding domain 5 96 8.6E-22 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria BJD94_07915 85e46e104f93d2a67868d4955dfd17f5 105 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 1.3E-35 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 BJD94_11545 d18316f282c9dad2bb3a5830c9676503 401 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 60 388 1.9E-101 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BJD94_06225 a2ecc41c6edd10d03f0e885e3f776d53 212 Pfam PF01914 MarC family integral membrane protein 8 208 5.3E-65 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_06225 a2ecc41c6edd10d03f0e885e3f776d53 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 4.6E-66 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD94_20060 1a4ae6417ac6647fae5b8e7d066e4002 202 Pfam PF11140 Protein of unknown function (DUF2913) 13 192 4.7E-46 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 BJD94_06345 63f4112602ee6427da5435c0e82ede25 279 Pfam PF11207 Protein of unknown function (DUF2989) 23 225 1.9E-75 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 BJD94_20445 e1bec52c0b27eb95ca1d30d00d41a655 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 407 6.6E-15 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BJD94_14770 020b6705709f2df5af7c9d7861ffa6a6 155 Pfam PF11012 Protein of unknown function (DUF2850) 69 146 5.2E-31 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 BJD94_08515 31623aea58e4e2197e94ad9c17072b05 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 4.2E-23 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 BJD94_12900 224bd9889cb5d981c368fa69b090adc4 220 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 220 1.9E-48 T 14-10-2018 IPR026387 Outer membrane protein BJD94_16305 bd63e1de7b2a7fc58c3c7fbcc2d2de86 350 SUPERFAMILY SSF56935 25 350 1.34E-28 T 14-10-2018 BJD94_16305 bd63e1de7b2a7fc58c3c7fbcc2d2de86 350 Gene3D G3DSA:2.40.160.10 192 350 4.5E-7 T 14-10-2018 IPR023614 Porin domain superfamily BJD94_02120 d9d9b4e5c36dec5992f2265447c97cac 200 SMART SM00702 11 187 1.6E-27 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 BJD94_02120 d9d9b4e5c36dec5992f2265447c97cac 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 1.6E-20 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD94_02120 d9d9b4e5c36dec5992f2265447c97cac 200 Gene3D G3DSA:2.60.120.620 1 189 1.1E-52 T 14-10-2018 BJD94_09205 84e07e41824d217843009ad5047bcc05 322 Pfam PF13280 WYL domain 156 309 4.8E-18 T 14-10-2018 IPR026881 WYL domain BJD94_08860 99367389d0378f665029293c8f5912c2 152 Pfam PF05258 Protein of unknown function (DUF721) 11 90 3.8E-10 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 BJD94_19970 680da85a1a436af5cf5654517085d8ec 534 Pfam PF03235 Protein of unknown function DUF262 2 209 2.2E-23 T 14-10-2018 IPR004919 Domain of unknown function DUF262 BJD94_21095 0712aea0b5c601b35e08b7a55b5c731e 248 Gene3D G3DSA:3.60.110.10 1 245 4.7E-47 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_21095 0712aea0b5c601b35e08b7a55b5c731e 248 SUPERFAMILY SSF56317 5 241 5.89E-46 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD94_21095 0712aea0b5c601b35e08b7a55b5c731e 248 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 1.3E-24 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD94_19885 179694a562e71f48cf2613920c49bfc5 199 Gene3D G3DSA:3.80.10.10 20 195 1.2E-6 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily BJD94_21005 20f9df9eebe9d9ddcf71c2d4cdd6a45b 443 Pfam PF13584 Oxygen tolerance 69 299 6.9E-24 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD BJD94_05395 42363bae0f1ed3fc2dfbd87266a4fb84 533 Pfam PF03553 Na+/H+ antiporter family 165 497 1.4E-105 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BJD94_07780 61d367a5a06c0a57c4f0b954ba07512c 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.1E-29 T 14-10-2018 IPR006696 Protein of unknown function DUF423 BJD94_15965 73b065e107dd7b9fe1ca97dfd026ef25 135 Pfam PF12614 Ribosome recycling factor 9 133 1.8E-55 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial BJD94_17035 d7e94faeb7942398650ddcaf12c66b17 484 Pfam PF11840 Protein of unknown function (DUF3360) 3 484 5.1E-253 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 BJD94_07305 1e2988095a2c8da6081d4d1324983122 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.6E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BJD94_07305 1e2988095a2c8da6081d4d1324983122 131 PIRSF PIRSF002889 1 131 3.4E-32 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BJD94_09425 55d44e164da3c17bbf83b409425a934e 158 Pfam PF12821 Threonine/Serine exporter, ThrE 14 148 1.5E-36 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE BJD94_20010 cc5c5c9924d38a139426aa52b141d6a5 222 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 5.0E-30 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 BJD94_08155 1a964989cdc4d609b76ef0502bc56e4c 291 SUPERFAMILY SSF55186 122 273 4.06E-12 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD94_00060 d14a5a286eb9d0457ba7630ff5e46a71 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.3E-51 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG BJD94_14840 d14a5a286eb9d0457ba7630ff5e46a71 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.3E-51 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG BJD94_01895 fd1df369d37ec5663011b1a6b1bd6e43 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.2E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ BJD94_20240 44677d463498b515c014ec686eb3c159 285 Pfam PF02698 DUF218 domain 6 132 4.5E-15 T 14-10-2018 IPR003848 Domain of unknown function DUF218 BJD94_20680 93de1903f69e8df9c7f61f74f9472a5f 193 Pfam PF16964 Putative tight adherence pilin protein F 2 171 4.7E-28 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F BJD94_04250 f461fd66129fcc06c76f07f04b4bc06a 486 Pfam PF01943 Polysaccharide biosynthesis protein 12 273 2.3E-14 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BJD94_11660 c571dcaaecccbf9477d8341f77a42e88 337 Pfam PF01757 Acyltransferase family 7 327 7.3E-36 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD94_20675 f972b51800cac6c22dfff5de6f1eb3f2 175 Pfam PF07811 TadE-like protein 7 43 8.1E-5 T 14-10-2018 IPR012495 TadE-like BJD94_07600 f3ebf12ed6738097df6cd4824bf4559d 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.6E-47 T 14-10-2018 IPR009912 Zinc-ribbon containing domain BJD94_04915 ab25007a55ae15b5bffe636433878152 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.1E-37 T 14-10-2018 IPR010352 Protein of unknown function DUF945 BJD94_01140 24892a172403544a639bc3110df484a6 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.2E-45 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 BJD94_01630 fb53c6a0e0fb598f4213573dc9e271fd 930 SUPERFAMILY SSF52540 21 893 6.72E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD94_19525 521a48d1b93044fb3a972fa9c7bc979f 280 Pfam PF02361 Cobalt transport protein 17 235 5.8E-32 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BJD94_13005 cc7b0e7230c494524f6120947e67d477 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 1.1E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD94_12245 0ed7a2ede47460160c1a6f053ce84609 122 Pfam PF04892 VanZ like family 29 106 9.1E-10 T 14-10-2018 IPR006976 VanZ-like BJD94_16975 061e2847fca6062f45f57bfb226d5583 451 Pfam PF04632 Fusaric acid resistance protein family 9 200 5.4E-29 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 BJD94_03110 8b728fd80dd45f854d8d348f692f46c7 137 Pfam PF01541 GIY-YIG catalytic domain 32 59 6.6E-5 T 14-10-2018 IPR000305 GIY-YIG endonuclease BJD94_03110 8b728fd80dd45f854d8d348f692f46c7 137 SUPERFAMILY SSF82771 34 71 4.05E-5 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD94_01995 6f6628c4e1a84a95703a3810c200ee5f 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 7.0E-18 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 BJD94_03170 54cf6f1b95f46922b5888c3948cc74d1 150 Pfam PF13274 Protein of unknown function (DUF4065) 27 118 1.1E-22 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 BJD94_04830 2a51894685d0ed619fb3ee3246881d7a 225 Pfam PF04172 LrgB-like family 6 218 2.1E-71 T 14-10-2018 IPR007300 CidB/LrgB family BJD94_00180 51964b44da912d5961cc83ed55b116bb 528 Pfam PF03806 AbgT putative transporter family 19 526 3.0E-229 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 BJD94_06640 b5fae0e7768ac7af346d6f13fed37375 221 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 9.3E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ BJD94_17455 d81285da64430db7277fbd2ab2f816b3 244 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 237 1.2E-92 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family BJD94_17400 ed9b1263f499648226e8e57f98204261 324 PIRSF PIRSF034367 1 324 2.9E-199 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 BJD94_17400 ed9b1263f499648226e8e57f98204261 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 2.1E-183 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 BJD94_00620 3ec95d19422e7940f3ae8d8b6a916431 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 4.2E-21 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973