FORC53_0001 SM00382 ATPases associated with a variety of cellular activities FORC53_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain FORC53_0002 SM00480 DNA polymerase III beta subunit FORC53_0004 SM00387 Histidine kinase-like ATPases FORC53_0004 SM00433 TopoisomeraseII FORC53_0006 SM00052 Putative diguanylate phosphodiesterase FORC53_0006 SM00267 diguanylate cyclase FORC53_0006 SM01079 FORC53_0006 FORC53_0016 SM00829 Enoylreductase FORC53_0033 SM00382 ATPases associated with a variety of cellular activities FORC53_0043 SM00220 Serine/Threonine protein kinases, catalytic domain FORC53_0045 SM00448 cheY-homologous receiver domain FORC53_0046 SM00354 helix_turn _helix lactose operon repressor FORC53_0057 SM00344 helix_turn_helix ASNC type FORC53_0058 SM00052 Putative diguanylate phosphodiesterase FORC53_0058 SM00091 PAS domain FORC53_0058 SM00267 diguanylate cyclase FORC53_0066 SM00028 Tetratricopeptide repeats FORC53_0072 SM01219 FORC53_0072 FORC53_0079 SM00052 Putative diguanylate phosphodiesterase FORC53_0079 SM00267 diguanylate cyclase FORC53_0079 SM00897 FIST N domain FORC53_0079 SM01204 FORC53_0079 FORC53_0080 SM01144 FORC53_0080 FORC53_0087 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC53_0088 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC53_0089 SM00404 Protein tyrosine phosphatase, catalytic domain motif FORC53_0100 SM00382 ATPases associated with a variety of cellular activities FORC53_0100 SM00962 SRP54-type protein, GTPase domain FORC53_0100 SM00963 SRP54-type protein, helical bundle domain FORC53_0101 SM00382 ATPases associated with a variety of cellular activities FORC53_0104 SM00450 Rhodanese Homology Domain FORC53_0109 SM00563 Phosphate acyltransferases FORC53_0119 SM00360 RNA recognition motif FORC53_0125 SM00155 Phospholipase D. Active site motifs. FORC53_0132 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FORC53_0132 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FORC53_0133 SM00649 Ribosomal protein L11/L12 FORC53_0138 SM00663 RNA polymerase I subunit A N-terminus FORC53_0144 SM00986 Uracil DNA glycosylase superfamily FORC53_0144 SM00987 UreE urease accessory protein, C-terminal domain FORC53_0148 SM00411 bacterial (prokaryotic) histone like domain FORC53_0150 SM01209 FORC53_0150 FORC53_0150 SM01210 FORC53_0150 FORC53_0151 SM00798 AICARFT/IMPCHase bienzyme FORC53_0151 SM00851 MGS-like domain FORC53_0152 SM00422 helix_turn_helix, mercury resistance FORC53_0153 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0153 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0153 SM01049 FORC53_0153 FORC53_0157 SM00878 Biotin carboxylase C-terminal domain FORC53_0161 SM00479 FORC53_0161 FORC53_0162 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_0164 SM00387 Histidine kinase-like ATPases FORC53_0164 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0164 SM00448 cheY-homologous receiver domain FORC53_0171 SM00421 helix_turn_helix, Lux Regulon FORC53_0171 SM00448 cheY-homologous receiver domain FORC53_0178 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0178 SM00387 Histidine kinase-like ATPases FORC53_0178 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0179 SM00448 cheY-homologous receiver domain FORC53_0179 SM00862 Transcriptional regulatory protein, C terminal FORC53_0184 SM00883 Chaperonin 10 Kd subunit FORC53_0189 SM00841 Elongation factor P, C-terminal FORC53_0189 SM01185 FORC53_0189 FORC53_0201 SM00971 Serine acetyltransferase, N-terminal FORC53_0204 SM00450 Rhodanese Homology Domain FORC53_0211 SM00479 FORC53_0211 FORC53_0214 SM00257 Lysin motif FORC53_0214 SM00646 FORC53_0214 FORC53_0215 SM00853 MutL C terminal dimerisation domain FORC53_0215 SM01340 FORC53_0215 FORC53_0219 SM00244 prohibitin homologues FORC53_0220 SM00244 prohibitin homologues FORC53_0222 SM00788 Adenylosuccinate synthetase FORC53_0223 SM00671 Sel1-like repeats. FORC53_0227 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_0227 SM00357 Cold shock protein domain FORC53_0227 SM00955 FORC53_0227 FORC53_0228 SM00967 RNA 2'-O ribose methyltransferase substrate binding FORC53_0237 SM01150 FORC53_0237 FORC53_0238 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_0238 SM00419 helix_turn_helix, cAMP Regulatory protein FORC53_0243 SM00382 ATPases associated with a variety of cellular activities FORC53_0250 SM00320 WD40 repeats FORC53_0258 SM00838 Elongation factor G C-terminus FORC53_0258 SM00889 Elongation factor G, domain IV FORC53_0272 SM00382 ATPases associated with a variety of cellular activities FORC53_0272 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_0275 SM00354 helix_turn _helix lactose operon repressor FORC53_0276 SM00487 DEAD-like helicases superfamily FORC53_0276 SM00490 helicase superfamily c-terminal domain FORC53_0278 SM00919 Malic enzyme, NAD binding domain FORC53_0278 SM01274 FORC53_0278 FORC53_0286 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC53_0296 SM00965 Secretin and TonB N terminus short domain FORC53_0308 SM01005 Alanine racemase, C-terminal domain FORC53_0323 SM00897 FIST N domain FORC53_0323 SM01204 FORC53_0323 FORC53_0324 SM00091 PAS domain FORC53_0324 SM00267 diguanylate cyclase FORC53_0327 SM01018 B12 binding domain FORC53_0333 SM00421 helix_turn_helix, Lux Regulon FORC53_0335 SM00052 Putative diguanylate phosphodiesterase FORC53_0335 SM00267 diguanylate cyclase FORC53_0339 SM00965 Secretin and TonB N terminus short domain FORC53_0341 SM00028 Tetratricopeptide repeats FORC53_0342 SM00382 ATPases associated with a variety of cellular activities FORC53_0356 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_0360 SM00670 Large family of predicted nucleotide-binding domains FORC53_0361 SM00487 DEAD-like helicases superfamily FORC53_0361 SM00490 helicase superfamily c-terminal domain FORC53_0382 SM00495 Chitin-binding domain type 3 FORC53_0388 SM00354 helix_turn _helix lactose operon repressor FORC53_0390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_0392 SM00849 Metallo-beta-lactamase superfamily FORC53_0394 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0394 SM01049 FORC53_0394 FORC53_0397 SM00478 endonuclease III FORC53_0397 SM00525 FORC53_0397 FORC53_0400 SM00478 endonuclease III FORC53_0401 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_0404 SM01152 FORC53_0404 FORC53_0410 SM00732 Likely ribonuclease with RNase H fold. FORC53_0415 SM00731 SprT homologues. FORC53_0418 SM00861 Transketolase, pyrimidine binding domain FORC53_0420 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC53_0444 SM00838 Elongation factor G C-terminus FORC53_0446 SM00358 Double-stranded RNA binding motif FORC53_0446 SM00535 Ribonuclease III family FORC53_0453 SM00267 diguanylate cyclase FORC53_0454 SM00073 Histidine Phosphotransfer domain FORC53_0454 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0454 SM00387 Histidine kinase-like ATPases FORC53_0454 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0454 SM00448 cheY-homologous receiver domain FORC53_0456 SM00954 Region found in RelA / SpoT proteins FORC53_0459 SM01192 FORC53_0459 FORC53_0459 SM01193 FORC53_0459 FORC53_0466 SM00257 Lysin motif FORC53_0468 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FORC53_0468 SM00534 ATPase domain of DNA mismatch repair MUTS family FORC53_0470 SM00382 ATPases associated with a variety of cellular activities FORC53_0481 SM00382 ATPases associated with a variety of cellular activities FORC53_0488 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC53_0494 SM00829 Enoylreductase FORC53_0500 SM01091 Transporter associated domain FORC53_0502 SM00382 ATPases associated with a variety of cellular activities FORC53_0502 SM00962 SRP54-type protein, GTPase domain FORC53_0502 SM00963 SRP54-type protein, helical bundle domain FORC53_0514 SM00644 FORC53_0514 FORC53_0515 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_0515 SM00895 FORC53_0515 FORC53_0521 SM00947 Carbonic anhydrase FORC53_0523 SM00382 ATPases associated with a variety of cellular activities FORC53_0532 SM00487 DEAD-like helicases superfamily FORC53_0532 SM00490 helicase superfamily c-terminal domain FORC53_0532 SM00847 Helicase associated domain (HA2) Add an annotation FORC53_0541 SM00938 Nitrogen regulatory protein P-II FORC53_0545 SM00382 ATPases associated with a variety of cellular activities FORC53_0547 SM01068 Putative carbohydrate binding domain FORC53_0551 SM00382 ATPases associated with a variety of cellular activities FORC53_0552 SM00382 ATPases associated with a variety of cellular activities FORC53_0556 SM00091 PAS domain FORC53_0556 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0556 SM00387 Histidine kinase-like ATPases FORC53_0556 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0556 SM00448 cheY-homologous receiver domain FORC53_0570 SM01103 FORC53_0570 FORC53_0572 SM00382 ATPases associated with a variety of cellular activities FORC53_0577 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_0581 SM01387 FORC53_0581 FORC53_0582 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_0582 SM00322 K homology RNA-binding domain FORC53_0583 SM00028 Tetratricopeptide repeats FORC53_0584 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_0588 SM00052 Putative diguanylate phosphodiesterase FORC53_0588 SM00091 PAS domain FORC53_0588 SM00267 diguanylate cyclase FORC53_0593 SM00052 Putative diguanylate phosphodiesterase FORC53_0593 SM00267 diguanylate cyclase FORC53_0594 SM00267 diguanylate cyclase FORC53_0599 SM01133 FORC53_0599 FORC53_0600 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain FORC53_0606 SM00382 ATPases associated with a variety of cellular activities FORC53_0607 SM00267 diguanylate cyclase FORC53_0610 SM00838 Elongation factor G C-terminus FORC53_0610 SM00889 Elongation factor G, domain IV FORC53_0614 SM00342 helix_turn_helix, arabinose operon control protein FORC53_0619 SM00858 FORC53_0619 FORC53_0629 SM00028 Tetratricopeptide repeats FORC53_0637 SM01038 Beta galactosidase small chain FORC53_0639 SM00354 helix_turn _helix lactose operon repressor FORC53_0644 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0644 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0644 SM01049 FORC53_0644 FORC53_0645 SM00354 helix_turn _helix lactose operon repressor FORC53_0653 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_0653 SM01134 FORC53_0653 FORC53_0667 SM00925 MltA specific insert domain FORC53_0687 SM00900 FORC53_0687 FORC53_0693 SM00267 diguanylate cyclase FORC53_0693 SM00448 cheY-homologous receiver domain FORC53_0695 SM00487 DEAD-like helicases superfamily FORC53_0695 SM00490 helicase superfamily c-terminal domain FORC53_0697 SM00495 Chitin-binding domain type 3 FORC53_0697 SM00636 FORC53_0697 FORC53_0709 SM00849 Metallo-beta-lactamase superfamily FORC53_0721 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_0730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_0732 SM00935 Outer membrane protein (OmpH-like) FORC53_0738 SM00481 DNA polymerase alpha chain like domain FORC53_0740 SM00977 TilS substrate C-terminal domain FORC53_0742 SM00938 Nitrogen regulatory protein P-II FORC53_0745 SM00257 Lysin motif FORC53_0746 SM00849 Metallo-beta-lactamase superfamily FORC53_0749 SM00479 FORC53_0749 FORC53_0765 SM00028 Tetratricopeptide repeats FORC53_0770 SM01130 FORC53_0770 FORC53_0789 SM00382 ATPases associated with a variety of cellular activities FORC53_0790 SM00387 Histidine kinase-like ATPases FORC53_0790 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0791 SM00382 ATPases associated with a variety of cellular activities FORC53_0791 SM00448 cheY-homologous receiver domain FORC53_0796 SM00382 ATPases associated with a variety of cellular activities FORC53_0808 SM00382 ATPases associated with a variety of cellular activities FORC53_0808 SM00962 SRP54-type protein, GTPase domain FORC53_0811 SM00448 cheY-homologous receiver domain FORC53_0813 SM00073 Histidine Phosphotransfer domain FORC53_0813 SM00260 Two component signalling adaptor domain FORC53_0813 SM00387 Histidine kinase-like ATPases FORC53_0813 SM01231 FORC53_0813 FORC53_0814 SM00448 cheY-homologous receiver domain FORC53_0816 SM00260 Two component signalling adaptor domain FORC53_0817 SM00260 Two component signalling adaptor domain FORC53_0819 SM00382 ATPases associated with a variety of cellular activities FORC53_0837 SM00855 Phosphoglycerate mutase family FORC53_0838 SM00463 Small MutS-related domain FORC53_0845 SM00825 Beta-ketoacyl synthase FORC53_0847 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC53_0856 SM00448 cheY-homologous receiver domain FORC53_0859 SM00382 ATPases associated with a variety of cellular activities FORC53_0861 SM00493 FORC53_0861 FORC53_0864 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0864 SM00387 Histidine kinase-like ATPases FORC53_0864 SM00388 His Kinase A (phosphoacceptor) domain FORC53_0865 SM00448 cheY-homologous receiver domain FORC53_0865 SM00862 Transcriptional regulatory protein, C terminal FORC53_0872 SM00098 Alkaline phosphatase homologues FORC53_0890 SM00487 DEAD-like helicases superfamily FORC53_0891 SM00530 Helix-turn-helix XRE-family like proteins FORC53_0905 SM00267 diguanylate cyclase FORC53_0907 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0907 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0909 SM00862 Transcriptional regulatory protein, C terminal FORC53_0912 SM00267 diguanylate cyclase FORC53_0913 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_0917 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0917 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0927 SM00487 DEAD-like helicases superfamily FORC53_0927 SM00490 helicase superfamily c-terminal domain FORC53_0927 SM00982 FORC53_0927 FORC53_0927 SM01058 CarD-like/TRCF domain FORC53_0930 SM00382 ATPases associated with a variety of cellular activities FORC53_0933 SM00849 Metallo-beta-lactamase superfamily FORC53_0934 SM00382 ATPases associated with a variety of cellular activities FORC53_0938 SM00267 diguanylate cyclase FORC53_0941 SM00763 PrkA AAA domain FORC53_0945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0950 SM00382 ATPases associated with a variety of cellular activities FORC53_0951 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_0951 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC53_0954 SM01276 FORC53_0954 FORC53_0956 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_0956 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_0960 SM00491 FORC53_0960 FORC53_0965 SM00357 Cold shock protein domain FORC53_0967 SM00382 ATPases associated with a variety of cellular activities FORC53_0967 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_0968 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_0974 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC53_0974 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC53_0974 SM00493 FORC53_0974 FORC53_0981 SM00354 helix_turn _helix lactose operon repressor FORC53_0983 SM00448 cheY-homologous receiver domain FORC53_0983 SM00862 Transcriptional regulatory protein, C terminal FORC53_0989 SM00342 helix_turn_helix, arabinose operon control protein FORC53_1000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1001 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC53_1002 SM00382 ATPases associated with a variety of cellular activities FORC53_1012 SM00028 Tetratricopeptide repeats FORC53_1019 SM00387 Histidine kinase-like ATPases FORC53_1019 SM00388 His Kinase A (phosphoacceptor) domain FORC53_1019 SM00448 cheY-homologous receiver domain FORC53_1025 SM00487 DEAD-like helicases superfamily FORC53_1025 SM00490 helicase superfamily c-terminal domain FORC53_1035 SM00530 Helix-turn-helix XRE-family like proteins FORC53_1043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1044 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_1044 SM01134 FORC53_1044 FORC53_1049 SM01007 Class II Aldolase and Adducin N-terminal domain FORC53_1057 SM00342 helix_turn_helix, arabinose operon control protein FORC53_1060 SM00052 Putative diguanylate phosphodiesterase FORC53_1060 SM00267 diguanylate cyclase FORC53_1060 SM01049 FORC53_1060 FORC53_1061 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_1062 SM00052 Putative diguanylate phosphodiesterase FORC53_1062 SM00091 PAS domain FORC53_1063 SM00052 Putative diguanylate phosphodiesterase FORC53_1063 SM00091 PAS domain FORC53_1073 SM00382 ATPases associated with a variety of cellular activities FORC53_1074 SM00642 Alpha-amylase domain FORC53_1075 SM00267 diguanylate cyclase FORC53_1082 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_1088 SM00387 Histidine kinase-like ATPases FORC53_1088 SM01049 FORC53_1088 FORC53_1089 SM00421 helix_turn_helix, Lux Regulon FORC53_1089 SM00448 cheY-homologous receiver domain FORC53_1090 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_1092 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1093 SM00479 FORC53_1093 FORC53_1094 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_1094 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_1097 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_1100 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_1103 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1103 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1106 SM00052 Putative diguanylate phosphodiesterase FORC53_1111 SM00387 Histidine kinase-like ATPases FORC53_1111 SM00388 His Kinase A (phosphoacceptor) domain FORC53_1111 SM00448 cheY-homologous receiver domain FORC53_1118 SM00091 PAS domain FORC53_1118 SM00382 ATPases associated with a variety of cellular activities FORC53_1123 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_1123 SM00387 Histidine kinase-like ATPases FORC53_1124 SM00448 cheY-homologous receiver domain FORC53_1125 SM00267 diguanylate cyclase FORC53_1126 SM00052 Putative diguanylate phosphodiesterase FORC53_1126 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_1126 SM00267 diguanylate cyclase FORC53_1128 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_1129 SM00052 Putative diguanylate phosphodiesterase FORC53_1129 SM00267 diguanylate cyclase FORC53_1134 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FORC53_1135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_1138 SM00046 Diacylglycerol kinase catalytic domain (presumed) FORC53_1145 SM00382 ATPases associated with a variety of cellular activities FORC53_1146 SM00382 ATPases associated with a variety of cellular activities FORC53_1161 SM00267 diguanylate cyclase FORC53_1169 SM00267 diguanylate cyclase FORC53_1169 SM01079 FORC53_1169 FORC53_1170 SM00479 FORC53_1170 FORC53_1178 SM00858 FORC53_1178 FORC53_1185 SM00028 Tetratricopeptide repeats FORC53_1190 SM00636 FORC53_1190 FORC53_1191 SM00382 ATPases associated with a variety of cellular activities FORC53_1191 SM00487 DEAD-like helicases superfamily FORC53_1191 SM00490 helicase superfamily c-terminal domain FORC53_1191 SM00847 Helicase associated domain (HA2) Add an annotation FORC53_1201 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1201 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1208 SM00530 Helix-turn-helix XRE-family like proteins FORC53_1215 SM00267 diguanylate cyclase FORC53_1217 SM00873 B3/4 domain FORC53_1217 SM00874 tRNA synthetase B5 domain FORC53_1217 SM00896 Ferredoxin-fold anticodon binding domain FORC53_1221 SM00411 bacterial (prokaryotic) histone like domain FORC53_1222 SM00954 Region found in RelA / SpoT proteins FORC53_1227 SM00671 Sel1-like repeats. FORC53_1233 SM00020 Trypsin-like serine protease FORC53_1240 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_1240 SM00866 FORC53_1240 FORC53_1243 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC53_1275 SM01022 FORC53_1275 FORC53_1307 SM00901 FORC53_1307 FORC53_1390 SM00507 HNH nucleases FORC53_1392 SM00357 Cold shock protein domain FORC53_1452 SM00448 cheY-homologous receiver domain FORC53_1453 SM00267 diguanylate cyclase FORC53_1456 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1458 SM01144 FORC53_1458 FORC53_1461 SM00852 Probable molybdopterin binding domain FORC53_1463 SM00382 ATPases associated with a variety of cellular activities FORC53_1466 SM00382 ATPases associated with a variety of cellular activities FORC53_1466 SM00448 cheY-homologous receiver domain FORC53_1467 SM00387 Histidine kinase-like ATPases FORC53_1467 SM00388 His Kinase A (phosphoacceptor) domain FORC53_1470 SM00382 ATPases associated with a variety of cellular activities FORC53_1471 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1471 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1478 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC53_1495 SM00382 ATPases associated with a variety of cellular activities FORC53_1501 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_1501 SM00419 helix_turn_helix, cAMP Regulatory protein FORC53_1511 SM00897 FIST N domain FORC53_1511 SM01204 FORC53_1511 FORC53_1513 SM00387 Histidine kinase-like ATPases FORC53_1513 SM00388 His Kinase A (phosphoacceptor) domain FORC53_1513 SM00448 cheY-homologous receiver domain FORC53_1535 SM00382 ATPases associated with a variety of cellular activities FORC53_1537 SM00981 FORC53_1537 FORC53_1544 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_1544 SM00245 tail specific protease FORC53_1545 SM00945 ProQ/FINO family FORC53_1547 SM00382 ATPases associated with a variety of cellular activities FORC53_1556 SM00028 Tetratricopeptide repeats FORC53_1556 SM00267 diguanylate cyclase FORC53_1563 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1563 SM00387 Histidine kinase-like ATPases FORC53_1563 SM00388 His Kinase A (phosphoacceptor) domain FORC53_1563 SM00448 cheY-homologous receiver domain FORC53_1564 SM00382 ATPases associated with a variety of cellular activities FORC53_1564 SM00448 cheY-homologous receiver domain FORC53_1583 SM01350 FORC53_1583 FORC53_1586 SM00448 cheY-homologous receiver domain FORC53_1587 SM00091 PAS domain FORC53_1587 SM00387 Histidine kinase-like ATPases FORC53_1593 SM00421 helix_turn_helix, Lux Regulon FORC53_1600 SM00563 Phosphate acyltransferases FORC53_1604 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_1607 SM00382 ATPases associated with a variety of cellular activities FORC53_1612 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1613 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC53_1614 SM00327 von Willebrand factor (vWF) type A domain FORC53_1643 SM00028 Tetratricopeptide repeats FORC53_1644 SM00267 diguanylate cyclase FORC53_1648 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1648 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1650 SM00020 Trypsin-like serine protease FORC53_1650 SM00495 Chitin-binding domain type 3 FORC53_1661 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_1661 SM00895 FORC53_1661 FORC53_1662 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_1662 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1662 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_1670 SM00421 helix_turn_helix, Lux Regulon FORC53_1671 SM00020 Trypsin-like serine protease FORC53_1673 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1673 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1674 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_1678 SM00382 ATPases associated with a variety of cellular activities FORC53_1679 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_1679 SM01134 FORC53_1679 FORC53_1683 SM00357 Cold shock protein domain FORC53_1684 SM00267 diguanylate cyclase FORC53_1688 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_1696 SM00028 Tetratricopeptide repeats FORC53_1706 SM00382 ATPases associated with a variety of cellular activities FORC53_1710 SM00855 Phosphoglycerate mutase family FORC53_1723 SM00487 DEAD-like helicases superfamily FORC53_1723 SM00490 helicase superfamily c-terminal domain FORC53_1723 SM00847 Helicase associated domain (HA2) Add an annotation FORC53_1724 SM00919 Malic enzyme, NAD binding domain FORC53_1724 SM01274 FORC53_1724 FORC53_1727 SM00267 diguanylate cyclase FORC53_1732 SM00382 ATPases associated with a variety of cellular activities FORC53_1733 SM00382 ATPases associated with a variety of cellular activities FORC53_1736 SM00387 Histidine kinase-like ATPases FORC53_1737 SM00448 cheY-homologous receiver domain FORC53_1754 SM00382 ATPases associated with a variety of cellular activities FORC53_1759 SM00363 S4 RNA-binding domain FORC53_1760 SM00487 DEAD-like helicases superfamily FORC53_1760 SM00490 helicase superfamily c-terminal domain FORC53_1762 SM00448 cheY-homologous receiver domain FORC53_1762 SM00862 Transcriptional regulatory protein, C terminal FORC53_1763 SM00387 Histidine kinase-like ATPases FORC53_1767 SM00267 diguanylate cyclase FORC53_1774 SM00382 ATPases associated with a variety of cellular activities FORC53_1776 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_1776 SM00382 ATPases associated with a variety of cellular activities FORC53_1781 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_1781 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_1783 SM00155 Phospholipase D. Active site motifs. FORC53_1792 SM00382 ATPases associated with a variety of cellular activities FORC53_1796 SM00382 ATPases associated with a variety of cellular activities FORC53_1797 SM00382 ATPases associated with a variety of cellular activities FORC53_1800 SM01131 FORC53_1800 FORC53_1820 SM00840 FORC53_1820 FORC53_1823 SM00052 Putative diguanylate phosphodiesterase FORC53_1835 SM00528 Domain in histone-like proteins of HNS family FORC53_1854 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_1854 SM00876 Biotin and Thiamin Synthesis associated domain FORC53_1857 SM00382 ATPases associated with a variety of cellular activities FORC53_1859 SM00843 FORC53_1859 FORC53_1860 SM00344 helix_turn_helix ASNC type FORC53_1861 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC53_1861 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC53_1870 SM00849 Metallo-beta-lactamase superfamily FORC53_1880 SM00382 ATPases associated with a variety of cellular activities FORC53_1881 SM00382 ATPases associated with a variety of cellular activities FORC53_1886 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC53_1887 SM00028 Tetratricopeptide repeats FORC53_1889 SM00411 bacterial (prokaryotic) histone like domain FORC53_1890 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_1893 SM00822 FORC53_1893 FORC53_1896 SM00481 DNA polymerase alpha chain like domain FORC53_1897 SM00260 Two component signalling adaptor domain FORC53_1897 SM00448 cheY-homologous receiver domain FORC53_1910 SM00825 Beta-ketoacyl synthase FORC53_1912 SM00822 FORC53_1912 FORC53_1913 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FORC53_1919 SM00363 S4 RNA-binding domain FORC53_1920 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_1922 SM00226 Low molecular weight phosphatase family FORC53_1939 SM00434 DNA Topoisomerase IV FORC53_1945 SM00852 Probable molybdopterin binding domain FORC53_1952 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC53_1952 SM00465 GIY-YIG type nucleases (URI domain) FORC53_1953 SM00421 helix_turn_helix, Lux Regulon FORC53_1953 SM00448 cheY-homologous receiver domain FORC53_1954 SM00486 DNA polymerase type-B family FORC53_1955 SM00052 Putative diguanylate phosphodiesterase FORC53_1957 SM00841 Elongation factor P, C-terminal FORC53_1957 SM01185 FORC53_1957 FORC53_1959 SM00363 S4 RNA-binding domain FORC53_1962 SM00481 DNA polymerase alpha chain like domain FORC53_1976 SM00382 ATPases associated with a variety of cellular activities FORC53_1977 SM00382 ATPases associated with a variety of cellular activities FORC53_1985 SM00852 Probable molybdopterin binding domain FORC53_1986 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_1989 SM00382 ATPases associated with a variety of cellular activities FORC53_1989 SM00448 cheY-homologous receiver domain FORC53_1990 SM00487 DEAD-like helicases superfamily FORC53_1990 SM00490 helicase superfamily c-terminal domain FORC53_1996 SM00900 FORC53_1996 FORC53_1998 SM00478 endonuclease III FORC53_1998 SM00525 FORC53_1998 FORC53_2002 SM00479 FORC53_2002 FORC53_2013 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC53_2024 SM00155 Phospholipase D. Active site motifs. FORC53_2025 SM00267 diguanylate cyclase FORC53_2025 SM00448 cheY-homologous receiver domain FORC53_2027 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_2027 SM00387 Histidine kinase-like ATPases FORC53_2027 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2029 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC53_2029 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC53_2029 SM00493 FORC53_2029 FORC53_2033 SM00870 FORC53_2033 FORC53_2037 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC53_2039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2043 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_2043 SM00267 diguanylate cyclase FORC53_2049 SM00344 helix_turn_helix ASNC type FORC53_2055 SM00978 FORC53_2055 FORC53_2057 SM00563 Phosphate acyltransferases FORC53_2061 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FORC53_2067 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_2068 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_2069 SM01144 FORC53_2069 FORC53_2073 SM00411 bacterial (prokaryotic) histone like domain FORC53_2074 SM00382 ATPases associated with a variety of cellular activities FORC53_2074 SM00464 Found in ATP-dependent protease La (LON) FORC53_2075 SM00382 ATPases associated with a variety of cellular activities FORC53_2075 SM00994 ClpX C4-type zinc finger FORC53_2075 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_2079 SM00387 Histidine kinase-like ATPases FORC53_2079 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2080 SM00382 ATPases associated with a variety of cellular activities FORC53_2080 SM00448 cheY-homologous receiver domain FORC53_2085 SM00382 ATPases associated with a variety of cellular activities FORC53_2089 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2089 SM00387 Histidine kinase-like ATPases FORC53_2090 SM00448 cheY-homologous receiver domain FORC53_2090 SM00862 Transcriptional regulatory protein, C terminal FORC53_2092 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2100 SM00563 Phosphate acyltransferases FORC53_2116 SM00825 Beta-ketoacyl synthase FORC53_2117 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2118 SM00448 cheY-homologous receiver domain FORC53_2118 SM00862 Transcriptional regulatory protein, C terminal FORC53_2127 SM00474 3'-5' exonuclease FORC53_2133 SM00487 DEAD-like helicases superfamily FORC53_2133 SM00491 FORC53_2133 FORC53_2137 SM00836 DALR anticodon binding domain FORC53_2137 SM01016 Arginyl tRNA synthetase N terminal dom FORC53_2142 SM00342 helix_turn_helix, arabinose operon control protein FORC53_2144 SM00382 ATPases associated with a variety of cellular activities FORC53_2146 SM00881 CoA binding domain FORC53_2149 SM00861 Transketolase, pyrimidine binding domain FORC53_2174 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FORC53_2176 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2176 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2176 SM01358 FORC53_2176 FORC53_2179 SM00387 Histidine kinase-like ATPases FORC53_2180 SM00862 Transcriptional regulatory protein, C terminal FORC53_2185 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2186 SM00938 Nitrogen regulatory protein P-II FORC53_2192 SM00244 prohibitin homologues FORC53_2196 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC53_2196 SM00292 breast cancer carboxy-terminal domain FORC53_2196 SM00532 Ligase N family FORC53_2197 SM00771 ZipA, C-terminal domain (FtsZ-binding) FORC53_2210 SM00047 Lysozyme subfamily 2 FORC53_2219 SM00138 Methyltransferase, chemotaxis proteins FORC53_2220 SM00260 Two component signalling adaptor domain FORC53_2220 SM00448 cheY-homologous receiver domain FORC53_2221 SM00858 FORC53_2221 FORC53_2234 SM01081 Putative carbohydrate binding domain FORC53_2236 SM00463 Small MutS-related domain FORC53_2237 SM00363 S4 RNA-binding domain FORC53_2244 SM00937 FORC53_2244 FORC53_2248 SM01400 FORC53_2248 FORC53_2254 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_2257 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2257 SM01091 Transporter associated domain FORC53_2268 SM00936 Penicillin-binding protein 5, C-terminal domain FORC53_2271 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_2275 SM00862 Transcriptional regulatory protein, C terminal FORC53_2279 SM00642 Alpha-amylase domain FORC53_2281 SM00354 helix_turn _helix lactose operon repressor FORC53_2283 SM00382 ATPases associated with a variety of cellular activities FORC53_2283 SM00930 FORC53_2283 FORC53_2289 SM00028 Tetratricopeptide repeats FORC53_2290 SM00267 diguanylate cyclase FORC53_2292 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC53_2292 SM00475 5'-3' exonuclease FORC53_2293 SM00477 DNA/RNA non-specific endonuclease FORC53_2293 SM00892 DNA/RNA non-specific endonuclease FORC53_2300 SM00981 FORC53_2300 FORC53_2305 SM00861 Transketolase, pyrimidine binding domain FORC53_2315 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC53_2325 SM01211 FORC53_2325 FORC53_2326 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_2329 SM00829 Enoylreductase FORC53_2337 SM00271 DnaJ molecular chaperone homology domain FORC53_2352 SM00530 Helix-turn-helix XRE-family like proteins FORC53_2353 SM00563 Phosphate acyltransferases FORC53_2367 SM00495 Chitin-binding domain type 3 FORC53_2369 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2369 SM01240 FORC53_2369 FORC53_2372 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_2372 SM00267 diguanylate cyclase FORC53_2374 SM00382 ATPases associated with a variety of cellular activities FORC53_2375 SM00564 beta-propeller repeat FORC53_2382 SM00562 FORC53_2382 FORC53_2387 SM00271 DnaJ molecular chaperone homology domain FORC53_2398 SM01323 FORC53_2398 FORC53_2402 SM00020 Trypsin-like serine protease FORC53_2403 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2415 SM00382 ATPases associated with a variety of cellular activities FORC53_2421 SM00091 PAS domain FORC53_2421 SM00387 Histidine kinase-like ATPases FORC53_2421 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2422 SM00448 cheY-homologous receiver domain FORC53_2422 SM00862 Transcriptional regulatory protein, C terminal FORC53_2428 SM00382 ATPases associated with a variety of cellular activities FORC53_2428 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_2430 SM00363 S4 RNA-binding domain FORC53_2433 SM00830 Chorismate mutase type II FORC53_2437 SM00382 ATPases associated with a variety of cellular activities FORC53_2440 SM00830 Chorismate mutase type II FORC53_2449 SM00448 cheY-homologous receiver domain FORC53_2449 SM00850 LytTr DNA-binding domain FORC53_2454 SM00904 Riboflavin kinase FORC53_2457 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC53_2460 SM01154 FORC53_2460 FORC53_2466 SM00927 DNA mismatch repair enzyme MutH FORC53_2470 SM00382 ATPases associated with a variety of cellular activities FORC53_2472 SM00937 FORC53_2472 FORC53_2479 SM00487 DEAD-like helicases superfamily FORC53_2479 SM00490 helicase superfamily c-terminal domain FORC53_2484 SM00986 Uracil DNA glycosylase superfamily FORC53_2484 SM00987 UreE urease accessory protein, C-terminal domain FORC53_2485 SM00518 AP endonuclease family 2 FORC53_2494 SM00448 cheY-homologous receiver domain FORC53_2494 SM00862 Transcriptional regulatory protein, C terminal FORC53_2496 SM00073 Histidine Phosphotransfer domain FORC53_2496 SM00091 PAS domain FORC53_2496 SM00387 Histidine kinase-like ATPases FORC53_2496 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2496 SM00448 cheY-homologous receiver domain FORC53_2497 SM00091 PAS domain FORC53_2497 SM00267 diguanylate cyclase FORC53_2498 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_2511 SM00851 MGS-like domain FORC53_2511 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FORC53_2512 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain FORC53_2515 SM00957 SecA DEAD-like domain FORC53_2515 SM00958 SecA preprotein cross-linking domain FORC53_2518 SM00864 Tubulin/FtsZ family, GTPase domain FORC53_2518 SM00865 Tubulin/FtsZ family, C-terminal domain FORC53_2519 SM00842 Cell division protein FtsA FORC53_2536 SM00749 bacterial OsmY and nodulation domain FORC53_2546 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_2547 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_2548 SM00434 DNA Topoisomerase IV FORC53_2549 SM00387 Histidine kinase-like ATPases FORC53_2549 SM00433 TopoisomeraseII FORC53_2557 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2559 SM00880 FORC53_2559 FORC53_2559 SM01118 FORC53_2559 FORC53_2562 SM00287 Bacterial SH3 domain homologues FORC53_2563 SM00382 ATPases associated with a variety of cellular activities FORC53_2567 SM00905 Dihydroneopterin aldolase FORC53_2568 SM01207 FORC53_2568 FORC53_2574 SM00400 zinc finger FORC53_2574 SM00493 FORC53_2574 FORC53_2574 SM00766 DNA primase DnaG DnaB-binding FORC53_2601 SM00563 Phosphate acyltransferases FORC53_2607 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_2607 SM01134 FORC53_2607 FORC53_2609 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_2609 SM00895 FORC53_2609 FORC53_2610 SM00091 PAS domain FORC53_2610 SM00267 diguanylate cyclase FORC53_2616 SM00014 Acid phosphatase homologues FORC53_2618 SM00917 LeuA allosteric (dimerisation) domain FORC53_2619 SM01329 FORC53_2619 FORC53_2623 SM00271 DnaJ molecular chaperone homology domain FORC53_2628 SM00650 Ribosomal RNA adenine dimethylases FORC53_2643 SM00563 Phosphate acyltransferases FORC53_2650 SM00382 ATPases associated with a variety of cellular activities FORC53_2652 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2656 SM00382 ATPases associated with a variety of cellular activities FORC53_2662 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2662 SM00924 MgtE intracellular N domain FORC53_2665 SM00382 ATPases associated with a variety of cellular activities FORC53_2682 SM00382 ATPases associated with a variety of cellular activities FORC53_2699 SM00662 RNA polymerases D FORC53_2700 SM00363 S4 RNA-binding domain FORC53_2700 SM01390 FORC53_2700 FORC53_2712 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FORC53_2713 SM01374 FORC53_2713 FORC53_2717 SM00322 K homology RNA-binding domain FORC53_2720 SM01382 FORC53_2720 FORC53_2720 SM01383 FORC53_2720 FORC53_2724 SM01403 FORC53_2724 FORC53_2726 SM01276 FORC53_2726 FORC53_2727 SM00849 Metallo-beta-lactamase superfamily FORC53_2727 SM01027 Beta-Casp domain FORC53_2729 SM00984 UDP binding domain FORC53_2747 SM00226 Low molecular weight phosphatase family FORC53_2774 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_2789 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FORC53_2789 SM01232 FORC53_2789 FORC53_2794 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2794 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2794 SM01049 FORC53_2794 FORC53_2804 SM00382 ATPases associated with a variety of cellular activities FORC53_2805 SM00382 ATPases associated with a variety of cellular activities FORC53_2815 SM00028 Tetratricopeptide repeats FORC53_2816 SM00072 Guanylate kinase homologues. FORC53_2817 SM01409 FORC53_2817 FORC53_2818 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_2818 SM00954 Region found in RelA / SpoT proteins FORC53_2820 SM00487 DEAD-like helicases superfamily FORC53_2820 SM00490 helicase superfamily c-terminal domain FORC53_2822 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2822 SM00387 Histidine kinase-like ATPases FORC53_2822 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2823 SM00448 cheY-homologous receiver domain FORC53_2823 SM00862 Transcriptional regulatory protein, C terminal FORC53_2825 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_2825 SM00732 Likely ribonuclease with RNase H fold. FORC53_2841 SM00382 ATPases associated with a variety of cellular activities FORC53_2844 SM00363 S4 RNA-binding domain FORC53_2854 SM01230 FORC53_2854 FORC53_2856 SM00387 Histidine kinase-like ATPases FORC53_2856 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2857 SM00382 ATPases associated with a variety of cellular activities FORC53_2857 SM00448 cheY-homologous receiver domain FORC53_2858 SM00052 Putative diguanylate phosphodiesterase FORC53_2858 SM00267 diguanylate cyclase FORC53_2858 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2859 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_2865 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC53_2865 SM00474 3'-5' exonuclease FORC53_2865 SM00475 5'-3' exonuclease FORC53_2865 SM00482 DNA polymerase A domain FORC53_2866 SM01004 Delta-aminolevulinic acid dehydratase FORC53_2884 SM00357 Cold shock protein domain FORC53_2884 SM00382 ATPases associated with a variety of cellular activities FORC53_2884 SM00959 Rho termination factor, N-terminal domain FORC53_2886 SM00487 DEAD-like helicases superfamily FORC53_2886 SM00490 helicase superfamily c-terminal domain FORC53_2890 SM00341 Helicase and RNase D C-terminal FORC53_2890 SM00487 DEAD-like helicases superfamily FORC53_2890 SM00490 helicase superfamily c-terminal domain FORC53_2890 SM00956 FORC53_2890 FORC53_2892 SM00342 helix_turn_helix, arabinose operon control protein FORC53_2903 SM00876 Biotin and Thiamin Synthesis associated domain FORC53_2920 SM01001 AIR carboxylase FORC53_2925 SM00257 Lysin motif FORC53_2938 SM00563 Phosphate acyltransferases FORC53_2940 SM00382 ATPases associated with a variety of cellular activities FORC53_2948 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_2952 SM00382 ATPases associated with a variety of cellular activities FORC53_2960 SM00470 ParB-like nuclease domain FORC53_2963 SM01228 FORC53_2963 FORC53_2968 SM00382 ATPases associated with a variety of cellular activities FORC53_2970 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_2973 SM00382 ATPases associated with a variety of cellular activities FORC53_2974 SM00382 ATPases associated with a variety of cellular activities FORC53_2978 SM00387 Histidine kinase-like ATPases FORC53_2978 SM00388 His Kinase A (phosphoacceptor) domain FORC53_2978 SM00448 cheY-homologous receiver domain FORC53_2984 SM00382 ATPases associated with a variety of cellular activities FORC53_2988 SM00387 Histidine kinase-like ATPases FORC53_2989 SM00448 cheY-homologous receiver domain FORC53_2989 SM00850 LytTr DNA-binding domain FORC53_2990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_2990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_2990 SM01049 FORC53_2990 FORC53_2999 SM01154 FORC53_2999 FORC53_3004 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3004 SM01009 AlkA N-terminal domain FORC53_3012 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC53_3012 SM00495 Chitin-binding domain type 3 FORC53_3012 SM00636 FORC53_3012 FORC53_3017 SM00267 diguanylate cyclase FORC53_3018 SM00267 diguanylate cyclase FORC53_3019 SM00642 Alpha-amylase domain FORC53_3024 SM00642 Alpha-amylase domain FORC53_3025 SM00671 Sel1-like repeats. FORC53_3036 SM00100 Cyclic nucleotide-monophosphate binding domain FORC53_3036 SM00419 helix_turn_helix, cAMP Regulatory protein FORC53_3045 SM00421 helix_turn_helix, Lux Regulon FORC53_3049 SM00642 Alpha-amylase domain FORC53_3050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3050 SM01358 FORC53_3050 FORC53_3051 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_3053 SM00344 helix_turn_helix ASNC type FORC53_3055 SM00495 Chitin-binding domain type 3 FORC53_3060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3062 SM00052 Putative diguanylate phosphodiesterase FORC53_3065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_3075 SM00387 Histidine kinase-like ATPases FORC53_3075 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3076 SM00448 cheY-homologous receiver domain FORC53_3076 SM00862 Transcriptional regulatory protein, C terminal FORC53_3077 SM00267 diguanylate cyclase FORC53_3081 SM00354 helix_turn _helix lactose operon repressor FORC53_3086 SM00382 ATPases associated with a variety of cellular activities FORC53_3087 SM00354 helix_turn _helix lactose operon repressor FORC53_3092 SM00382 ATPases associated with a variety of cellular activities FORC53_3093 SM00382 ATPases associated with a variety of cellular activities FORC53_3095 SM00354 helix_turn _helix lactose operon repressor FORC53_3099 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3100 SM01217 FORC53_3100 FORC53_3108 SM00974 FORC53_3108 FORC53_3113 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_3113 SM00267 diguanylate cyclase FORC53_3117 SM00354 helix_turn _helix lactose operon repressor FORC53_3119 SM00382 ATPases associated with a variety of cellular activities FORC53_3121 SM01038 Beta galactosidase small chain FORC53_3134 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3134 SM00871 Bacterial transcription activator, effector binding domain FORC53_3138 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_3138 SM00382 ATPases associated with a variety of cellular activities FORC53_3139 SM00849 Metallo-beta-lactamase superfamily FORC53_3143 SM00421 helix_turn_helix, Lux Regulon FORC53_3146 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3151 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_3157 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC53_3168 SM00357 Cold shock protein domain FORC53_3183 SM00849 Metallo-beta-lactamase superfamily FORC53_3188 SM00421 helix_turn_helix, Lux Regulon FORC53_3193 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_3195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_3195 SM00267 diguanylate cyclase FORC53_3197 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_3199 SM00642 Alpha-amylase domain FORC53_3204 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3204 SM00387 Histidine kinase-like ATPases FORC53_3204 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3205 SM00448 cheY-homologous receiver domain FORC53_3205 SM00862 Transcriptional regulatory protein, C terminal FORC53_3221 SM00014 Acid phosphatase homologues FORC53_3226 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3234 SM00267 diguanylate cyclase FORC53_3234 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3239 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_3241 SM00481 DNA polymerase alpha chain like domain FORC53_3244 SM00248 ankyrin repeats FORC53_3245 SM01060 FORC53_3245 FORC53_3256 SM00829 Enoylreductase FORC53_3276 SM00849 Metallo-beta-lactamase superfamily FORC53_3281 SM00421 helix_turn_helix, Lux Regulon FORC53_3281 SM00448 cheY-homologous receiver domain FORC53_3282 SM00267 diguanylate cyclase FORC53_3283 SM00421 helix_turn_helix, Lux Regulon FORC53_3283 SM00448 cheY-homologous receiver domain FORC53_3284 SM00052 Putative diguanylate phosphodiesterase FORC53_3284 SM00448 cheY-homologous receiver domain FORC53_3285 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_3285 SM00387 Histidine kinase-like ATPases FORC53_3285 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3285 SM00448 cheY-homologous receiver domain FORC53_3288 SM00382 ATPases associated with a variety of cellular activities FORC53_3293 SM01057 Eukaryotic-type carbonic anhydrase FORC53_3297 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3297 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3301 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_3301 SM00245 tail specific protease FORC53_3304 SM00382 ATPases associated with a variety of cellular activities FORC53_3308 SM00267 diguanylate cyclase FORC53_3309 SM00028 Tetratricopeptide repeats FORC53_3313 SM00422 helix_turn_helix, mercury resistance FORC53_3315 SM00257 Lysin motif FORC53_3317 SM00487 DEAD-like helicases superfamily FORC53_3317 SM00490 helicase superfamily c-terminal domain FORC53_3323 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3323 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3324 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3328 SM00382 ATPases associated with a variety of cellular activities FORC53_3329 SM00267 diguanylate cyclase FORC53_3331 SM00028 Tetratricopeptide repeats FORC53_3331 SM00327 von Willebrand factor (vWF) type A domain FORC53_3332 SM00327 von Willebrand factor (vWF) type A domain FORC53_3336 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3336 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3338 SM00421 helix_turn_helix, Lux Regulon FORC53_3339 SM00421 helix_turn_helix, Lux Regulon FORC53_3341 SM00382 ATPases associated with a variety of cellular activities FORC53_3352 SM00382 ATPases associated with a variety of cellular activities FORC53_3359 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3362 SM00267 diguanylate cyclase FORC53_3374 SM00382 ATPases associated with a variety of cellular activities FORC53_3380 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC53_3384 SM00260 Two component signalling adaptor domain FORC53_3384 SM00448 cheY-homologous receiver domain FORC53_3386 SM00857 Resolvase, N terminal domain FORC53_3388 SM00857 Resolvase, N terminal domain FORC53_3396 SM00642 Alpha-amylase domain FORC53_3397 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3397 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3398 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3398 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3416 SM00267 diguanylate cyclase FORC53_3416 SM01079 FORC53_3416 FORC53_3417 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3417 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3420 SM00267 diguanylate cyclase FORC53_3423 SM01266 FORC53_3423 FORC53_3428 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3433 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3433 SM00871 Bacterial transcription activator, effector binding domain FORC53_3441 SM00382 ATPases associated with a variety of cellular activities FORC53_3443 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_3443 SM00866 FORC53_3443 FORC53_3453 SM00936 Penicillin-binding protein 5, C-terminal domain FORC53_3456 SM00028 Tetratricopeptide repeats FORC53_3462 SM00382 ATPases associated with a variety of cellular activities FORC53_3481 SM00450 Rhodanese Homology Domain FORC53_3496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3501 SM01022 FORC53_3501 FORC53_3502 SM00014 Acid phosphatase homologues FORC53_3509 SM00382 ATPases associated with a variety of cellular activities FORC53_3510 SM00327 von Willebrand factor (vWF) type A domain FORC53_3516 SM00382 ATPases associated with a variety of cellular activities FORC53_3520 SM00354 helix_turn _helix lactose operon repressor FORC53_3522 SM00260 Two component signalling adaptor domain FORC53_3522 SM00448 cheY-homologous receiver domain FORC53_3526 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_3526 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3531 SM00091 PAS domain FORC53_3531 SM00387 Histidine kinase-like ATPases FORC53_3531 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3531 SM00448 cheY-homologous receiver domain FORC53_3532 SM00448 cheY-homologous receiver domain FORC53_3532 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_3549 SM00327 von Willebrand factor (vWF) type A domain FORC53_3557 SM00387 Histidine kinase-like ATPases FORC53_3558 SM00448 cheY-homologous receiver domain FORC53_3559 SM01266 FORC53_3559 FORC53_3567 SM00382 ATPases associated with a variety of cellular activities FORC53_3568 SM00422 helix_turn_helix, mercury resistance FORC53_3576 SM00851 MGS-like domain FORC53_3578 SM00073 Histidine Phosphotransfer domain FORC53_3578 SM00387 Histidine kinase-like ATPases FORC53_3578 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3578 SM00448 cheY-homologous receiver domain FORC53_3588 SM00487 DEAD-like helicases superfamily FORC53_3588 SM00490 helicase superfamily c-terminal domain FORC53_3589 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_3589 SM00387 Histidine kinase-like ATPases FORC53_3589 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3589 SM00448 cheY-homologous receiver domain FORC53_3590 SM00052 Putative diguanylate phosphodiesterase FORC53_3590 SM00421 helix_turn_helix, Lux Regulon FORC53_3590 SM00448 cheY-homologous receiver domain FORC53_3591 SM00448 cheY-homologous receiver domain FORC53_3593 SM00052 Putative diguanylate phosphodiesterase FORC53_3593 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_3593 SM00267 diguanylate cyclase FORC53_3594 SM00635 Bacterial Ig-like domain 2 FORC53_3597 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3598 SM00316 Ribosomal protein S1-like RNA-binding domain FORC53_3598 SM00357 Cold shock protein domain FORC53_3598 SM00955 FORC53_3598 FORC53_3599 SM00487 DEAD-like helicases superfamily FORC53_3599 SM00490 helicase superfamily c-terminal domain FORC53_3601 SM00028 Tetratricopeptide repeats FORC53_3613 SM00327 von Willebrand factor (vWF) type A domain FORC53_3620 SM00028 Tetratricopeptide repeats FORC53_3621 SM00990 FORC53_3621 FORC53_3627 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_3638 SM00382 ATPases associated with a variety of cellular activities FORC53_3646 SM00530 Helix-turn-helix XRE-family like proteins FORC53_3648 SM00020 Trypsin-like serine protease FORC53_3657 SM00354 helix_turn _helix lactose operon repressor FORC53_3661 SM00052 Putative diguanylate phosphodiesterase FORC53_3666 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3666 SM00387 Histidine kinase-like ATPases FORC53_3666 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3667 SM00448 cheY-homologous receiver domain FORC53_3669 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3670 SM00495 Chitin-binding domain type 3 FORC53_3670 SM00636 FORC53_3670 FORC53_3676 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_3678 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3680 SM00487 DEAD-like helicases superfamily FORC53_3680 SM00490 helicase superfamily c-terminal domain FORC53_3681 SM00052 Putative diguanylate phosphodiesterase FORC53_3684 SM00867 YceI-like domain FORC53_3685 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_3695 SM00782 PhnA Zinc-Ribbon FORC53_3704 SM00642 Alpha-amylase domain FORC53_3709 SM00271 DnaJ molecular chaperone homology domain FORC53_3712 SM00052 Putative diguanylate phosphodiesterase FORC53_3712 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC53_3712 SM00267 diguanylate cyclase FORC53_3715 SM00382 ATPases associated with a variety of cellular activities FORC53_3718 SM00797 Allophanate hydrolase subunit 2 FORC53_3719 SM00796 Allophanate hydrolase subunit 1 FORC53_3722 SM00091 PAS domain FORC53_3722 SM00267 diguanylate cyclase FORC53_3725 SM00881 CoA binding domain FORC53_3753 SM00448 cheY-homologous receiver domain FORC53_3753 SM00862 Transcriptional regulatory protein, C terminal FORC53_3754 SM00387 Histidine kinase-like ATPases FORC53_3754 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3756 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC53_3756 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC53_3759 SM00267 diguanylate cyclase FORC53_3761 SM00267 diguanylate cyclase FORC53_3761 SM00448 cheY-homologous receiver domain FORC53_3763 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_3765 SM00382 ATPases associated with a variety of cellular activities FORC53_3773 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3781 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC53_3783 SM00450 Rhodanese Homology Domain FORC53_3789 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3793 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3793 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3793 SM01049 FORC53_3793 FORC53_3795 SM00028 Tetratricopeptide repeats FORC53_3807 SM00091 PAS domain FORC53_3807 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3811 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3811 SM00387 Histidine kinase-like ATPases FORC53_3811 SM00388 His Kinase A (phosphoacceptor) domain FORC53_3811 SM00448 cheY-homologous receiver domain FORC53_3812 SM00138 Methyltransferase, chemotaxis proteins FORC53_3814 SM00267 diguanylate cyclase FORC53_3814 SM00448 cheY-homologous receiver domain FORC53_3817 SM00487 DEAD-like helicases superfamily FORC53_3817 SM00490 helicase superfamily c-terminal domain FORC53_3819 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC53_3821 SM00028 Tetratricopeptide repeats FORC53_3821 SM00267 diguanylate cyclase FORC53_3825 SM00382 ATPases associated with a variety of cellular activities FORC53_3828 SM01012 FORC53_3828 FORC53_3832 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC53_3834 SM00642 Alpha-amylase domain FORC53_3835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3836 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3838 SM00458 Ricin-type beta-trefoil FORC53_3848 SM00248 ankyrin repeats FORC53_3860 SM00382 ATPases associated with a variety of cellular activities FORC53_3860 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_3869 SM00331 Sigma factor PP2C-like phosphatases FORC53_3869 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FORC53_3875 SM00240 Forkhead associated domain FORC53_3876 SM00220 Serine/Threonine protein kinases, catalytic domain FORC53_3884 SM00052 Putative diguanylate phosphodiesterase FORC53_3884 SM00267 diguanylate cyclase FORC53_3895 SM00387 Histidine kinase-like ATPases FORC53_3896 SM00448 cheY-homologous receiver domain FORC53_3896 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_3901 SM00861 Transketolase, pyrimidine binding domain FORC53_3903 SM00893 Electron transfer flavoprotein domain FORC53_3904 SM00893 Electron transfer flavoprotein domain FORC53_3906 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3906 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3907 SM01005 Alanine racemase, C-terminal domain FORC53_3911 SM00382 ATPases associated with a variety of cellular activities FORC53_3913 SM00382 ATPases associated with a variety of cellular activities FORC53_3914 SM00822 FORC53_3914 FORC53_3921 SM00422 helix_turn_helix, mercury resistance FORC53_3928 SM00357 Cold shock protein domain FORC53_3932 SM00829 Enoylreductase FORC53_3936 SM00421 helix_turn_helix, Lux Regulon FORC53_3936 SM00448 cheY-homologous receiver domain FORC53_3937 SM00387 Histidine kinase-like ATPases FORC53_3940 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_3940 SM00267 diguanylate cyclase FORC53_3943 SM00357 Cold shock protein domain FORC53_3945 SM01322 FORC53_3945 FORC53_3953 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3953 SM01358 FORC53_3953 FORC53_3968 SM00852 Probable molybdopterin binding domain FORC53_3970 SM00450 Rhodanese Homology Domain FORC53_3971 SM00052 Putative diguanylate phosphodiesterase FORC53_3971 SM00267 diguanylate cyclase FORC53_3972 SM00636 FORC53_3972 FORC53_3975 SM00861 Transketolase, pyrimidine binding domain FORC53_3977 SM00052 Putative diguanylate phosphodiesterase FORC53_3977 SM00267 diguanylate cyclase FORC53_3977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_3978 SM00091 PAS domain FORC53_3978 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_3993 SM00342 helix_turn_helix, arabinose operon control protein FORC53_3997 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_4002 SM00052 Putative diguanylate phosphodiesterase FORC53_4002 SM00267 diguanylate cyclase FORC53_4008 SM00052 Putative diguanylate phosphodiesterase FORC53_4008 SM00267 diguanylate cyclase FORC53_4016 SM01119 FORC53_4016 FORC53_4019 SM00382 ATPases associated with a variety of cellular activities FORC53_4025 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC53_4028 SM00487 DEAD-like helicases superfamily FORC53_4028 SM00490 helicase superfamily c-terminal domain FORC53_4069 SM01252 FORC53_4069 FORC53_4077 SM00248 ankyrin repeats FORC53_4081 SM00382 ATPases associated with a variety of cellular activities FORC53_4090 SM00244 prohibitin homologues FORC53_4091 SM00244 prohibitin homologues FORC53_4100 SM00382 ATPases associated with a variety of cellular activities FORC53_4105 SM00382 ATPases associated with a variety of cellular activities FORC53_4111 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC53_4114 SM00155 Phospholipase D. Active site motifs. FORC53_4127 SM01240 FORC53_4127 FORC53_4131 SM00448 cheY-homologous receiver domain FORC53_4133 SM00421 helix_turn_helix, Lux Regulon FORC53_4133 SM00448 cheY-homologous receiver domain FORC53_4134 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4134 SM00387 Histidine kinase-like ATPases FORC53_4137 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC53_4143 SM01130 FORC53_4143 FORC53_4162 SM00344 helix_turn_helix ASNC type FORC53_4165 SM00387 Histidine kinase-like ATPases FORC53_4165 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4165 SM00448 cheY-homologous receiver domain FORC53_4173 SM00387 Histidine kinase-like ATPases FORC53_4173 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4173 SM00448 cheY-homologous receiver domain FORC53_4176 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC53_4179 SM00788 Adenylosuccinate synthetase FORC53_4183 SM00344 helix_turn_helix ASNC type FORC53_4187 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_4189 SM00387 Histidine kinase-like ATPases FORC53_4189 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4190 SM00448 cheY-homologous receiver domain FORC53_4190 SM00862 Transcriptional regulatory protein, C terminal FORC53_4192 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4195 SM00924 MgtE intracellular N domain FORC53_4196 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4196 SM00871 Bacterial transcription activator, effector binding domain FORC53_4201 SM00382 ATPases associated with a variety of cellular activities FORC53_4210 SM00327 von Willebrand factor (vWF) type A domain FORC53_4210 SM00609 Vault protein Inter-alpha-Trypsin domain FORC53_4211 SM00563 Phosphate acyltransferases FORC53_4214 SM00849 Metallo-beta-lactamase superfamily FORC53_4216 SM00052 Putative diguanylate phosphodiesterase FORC53_4220 SM00382 ATPases associated with a variety of cellular activities FORC53_4221 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_4225 SM00495 Chitin-binding domain type 3 FORC53_4226 SM00052 Putative diguanylate phosphodiesterase FORC53_4228 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_4229 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4229 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4230 SM00062 Bacterial periplasmic substrate-binding proteins FORC53_4235 SM00823 Phosphopantetheine attachment site FORC53_4244 SM00830 Chorismate mutase type II FORC53_4253 SM00849 Metallo-beta-lactamase superfamily FORC53_4262 SM00382 ATPases associated with a variety of cellular activities FORC53_4265 SM00354 helix_turn _helix lactose operon repressor FORC53_4271 SM01091 Transporter associated domain FORC53_4274 SM00382 ATPases associated with a variety of cellular activities FORC53_4275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_4275 SM00091 PAS domain FORC53_4275 SM00267 diguanylate cyclase FORC53_4280 SM00421 helix_turn_helix, Lux Regulon FORC53_4287 SM00849 Metallo-beta-lactamase superfamily FORC53_4288 SM00028 Tetratricopeptide repeats FORC53_4295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC53_4302 SM00642 Alpha-amylase domain FORC53_4317 SM00346 helix_turn_helix isocitrate lyase regulation FORC53_4318 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC53_4319 SM00479 FORC53_4319 FORC53_4332 SM00387 Histidine kinase-like ATPases FORC53_4332 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4332 SM00448 cheY-homologous receiver domain FORC53_4335 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4337 SM00422 helix_turn_helix, mercury resistance FORC53_4340 SM00448 cheY-homologous receiver domain FORC53_4340 SM00862 Transcriptional regulatory protein, C terminal FORC53_4341 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4341 SM00387 Histidine kinase-like ATPases FORC53_4344 SM00267 diguanylate cyclase FORC53_4344 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4346 SM00838 Elongation factor G C-terminus FORC53_4346 SM00889 Elongation factor G, domain IV FORC53_4354 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4368 SM00487 DEAD-like helicases superfamily FORC53_4368 SM00490 helicase superfamily c-terminal domain FORC53_4379 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4379 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4380 SM00073 Histidine Phosphotransfer domain FORC53_4380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_4380 SM00091 PAS domain FORC53_4380 SM00387 Histidine kinase-like ATPases FORC53_4380 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4380 SM00448 cheY-homologous receiver domain FORC53_4381 SM00448 cheY-homologous receiver domain FORC53_4381 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_4386 SM00382 ATPases associated with a variety of cellular activities FORC53_4386 SM00448 cheY-homologous receiver domain FORC53_4387 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC53_4387 SM00387 Histidine kinase-like ATPases FORC53_4389 SM00849 Metallo-beta-lactamase superfamily FORC53_4391 SM00448 cheY-homologous receiver domain FORC53_4391 SM00862 Transcriptional regulatory protein, C terminal FORC53_4392 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4392 SM00387 Histidine kinase-like ATPases FORC53_4392 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4399 SM00267 diguanylate cyclase FORC53_4403 SM00479 FORC53_4403 FORC53_4404 SM00382 ATPases associated with a variety of cellular activities FORC53_4412 SM00382 ATPases associated with a variety of cellular activities FORC53_4415 SM00895 FORC53_4415 FORC53_4425 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_4425 SM01134 FORC53_4425 FORC53_4427 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_4427 SM01134 FORC53_4427 FORC53_4429 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4432 SM00849 Metallo-beta-lactamase superfamily FORC53_4436 SM00671 Sel1-like repeats. FORC53_4442 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4446 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4451 SM00344 helix_turn_helix ASNC type FORC53_4452 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4458 SM00354 helix_turn _helix lactose operon repressor FORC53_4461 SM00487 DEAD-like helicases superfamily FORC53_4461 SM00490 helicase superfamily c-terminal domain FORC53_4463 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC53_4463 SM00895 FORC53_4463 FORC53_4477 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC53_4477 SM01134 FORC53_4477 FORC53_4481 SM01007 Class II Aldolase and Adducin N-terminal domain FORC53_4483 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC53_4487 SM00382 ATPases associated with a variety of cellular activities FORC53_4497 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4497 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4498 SM00382 ATPases associated with a variety of cellular activities FORC53_4509 SM00344 helix_turn_helix ASNC type FORC53_4515 SM00342 helix_turn_helix, arabinose operon control protein FORC53_4517 SM00421 helix_turn_helix, Lux Regulon FORC53_4519 SM00387 Histidine kinase-like ATPases FORC53_4519 SM00388 His Kinase A (phosphoacceptor) domain FORC53_4520 SM00448 cheY-homologous receiver domain FORC53_4523 SM00052 Putative diguanylate phosphodiesterase FORC53_4523 SM00267 diguanylate cyclase FORC53_4524 SM00382 ATPases associated with a variety of cellular activities FORC53_4528 SM00883 Chaperonin 10 Kd subunit FORC53_4529 SM01266 FORC53_4529 FORC53_4530 SM00028 Tetratricopeptide repeats FORC53_4537 SM00052 Putative diguanylate phosphodiesterase FORC53_4538 SM00855 Phosphoglycerate mutase family FORC53_4547 SM00331 Sigma factor PP2C-like phosphatases FORC53_4547 SM00448 cheY-homologous receiver domain FORC53_4549 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4550 SM00448 cheY-homologous receiver domain FORC53_4552 SM00138 Methyltransferase, chemotaxis proteins FORC53_4553 SM00091 PAS domain FORC53_4553 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_4553 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC53_4554 SM00260 Two component signalling adaptor domain FORC53_4555 SM00260 Two component signalling adaptor domain FORC53_4556 SM00073 Histidine Phosphotransfer domain FORC53_4556 SM00260 Two component signalling adaptor domain FORC53_4556 SM00387 Histidine kinase-like ATPases FORC53_4556 SM01231 FORC53_4556 FORC53_4557 SM00448 cheY-homologous receiver domain FORC53_4560 SM00470 ParB-like nuclease domain FORC53_4585 SM00528 Domain in histone-like proteins of HNS family FORC53_4597 SM00014 Acid phosphatase homologues FORC53_4598 SM00014 Acid phosphatase homologues FORC53_4624 SM00248 ankyrin repeats FORC53_4642 SM01193 FORC53_4642 FORC53_4667 SM00891 ERCC4 domain FORC53_4715 SM00382 ATPases associated with a variety of cellular activities FORC53_4803 SM00563 Phosphate acyltransferases FORC53_4808 SM00014 Acid phosphatase homologues FORC53_4821 SM00072 Guanylate kinase homologues. FORC53_4887 SM00411 bacterial (prokaryotic) histone like domain FORC53_4991 SM00977 TilS substrate C-terminal domain FORC53_5047 SM00562 FORC53_5047 FORC53_5048 SM00244 prohibitin homologues FORC53_5057 SM00020 Trypsin-like serine protease FORC53_5078 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC53_5078 SM00475 5'-3' exonuclease FORC53_5078 SM00482 DNA polymerase A domain FORC53_5087 SM00891 ERCC4 domain FORC53_5090 SM00465 GIY-YIG type nucleases (URI domain) FORC53_5094 SM00479 FORC53_5094 FORC53_5107 SM00411 bacterial (prokaryotic) histone like domain FORC53_5109 SM00986 Uracil DNA glycosylase superfamily FORC53_5109 SM00987 UreE urease accessory protein, C-terminal domain FORC53_5141 SM00411 bacterial (prokaryotic) histone like domain FORC53_5149 SM00528 Domain in histone-like proteins of HNS family FORC53_5156 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC53_5156 SM00532 Ligase N family FORC53_5167 SM00052 Putative diguanylate phosphodiesterase FORC53_5184 SM00867 YceI-like domain FORC53_5205 SM00382 ATPases associated with a variety of cellular activities FORC53_5211 SM00052 Putative diguanylate phosphodiesterase FORC53_5214 SM00267 diguanylate cyclase FORC53_5217 SM00028 Tetratricopeptide repeats FORC53_5217 SM00448 cheY-homologous receiver domain FORC53_5291 SM00479 FORC53_5291 FORC53_5318 SM00487 DEAD-like helicases superfamily FORC53_5318 SM00490 helicase superfamily c-terminal domain FORC53_5318 SM00982 FORC53_5318 FORC53_5318 SM01058 CarD-like/TRCF domain FORC53_5329 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain FORC53_5331 SM00957 SecA DEAD-like domain FORC53_5331 SM00958 SecA preprotein cross-linking domain FORC53_5333 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC53_5360 SM00382 ATPases associated with a variety of cellular activities FORC53_5362 SM00974 FORC53_5362 FORC53_5367 SM00341 Helicase and RNase D C-terminal FORC53_5367 SM00487 DEAD-like helicases superfamily FORC53_5367 SM00490 helicase superfamily c-terminal domain FORC53_5367 SM00956 FORC53_5367 FORC53_5369 SM00382 ATPases associated with a variety of cellular activities FORC53_5373 SM00671 Sel1-like repeats. FORC53_5375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC53_5377 SM00479 FORC53_5377 FORC53_5378 SM00382 ATPases associated with a variety of cellular activities FORC53_5379 SM00481 DNA polymerase alpha chain like domain FORC53_5383 SM00487 DEAD-like helicases superfamily FORC53_5383 SM00490 helicase superfamily c-terminal domain FORC53_5387 SM00052 Putative diguanylate phosphodiesterase FORC53_5388 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC53_5388 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC53_5388 SM00493 FORC53_5388 FORC53_5400 SM00482 DNA polymerase A domain FORC53_5401 SM00382 ATPases associated with a variety of cellular activities FORC53_5401 SM00994 ClpX C4-type zinc finger FORC53_5401 SM01086 C-terminal, D2-small domain, of ClpB protein FORC53_5404 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC53_5404 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC53_5404 SM00493 FORC53_5404 FORC53_5440 SM00507 HNH nucleases FORC53_5447 SM00382 ATPases associated with a variety of cellular activities FORC53_5452 SM00020 Trypsin-like serine protease FORC53_5539 SM00506 Appr-1"-p processing enzyme FORC53_5558 SM00530 Helix-turn-helix XRE-family like proteins FORC53_5561 SM00054 EF-hand, calcium binding motif FORC53_5585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC53_5614 SM00488 FORC53_5614 FORC53_5614 SM00491 FORC53_5614 FORC53_5622 SM00530 Helix-turn-helix XRE-family like proteins