locus-tag class description FORC54_0001 PF08299 Bacterial dnaA protein helix-turn-helix FORC54_0001 PF00308 Bacterial dnaA protein FORC54_0001 PF11638 DnaA N-terminal domain FORC54_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain FORC54_0002 PF02767 DNA polymerase III beta subunit, central domain FORC54_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain FORC54_0003 PF02463 RecF/RecN/SMC N terminal domain FORC54_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0004 PF18053 DNA gyrase B subunit insert domain FORC54_0004 PF01751 Toprim domain FORC54_0004 PF00204 DNA gyrase B FORC54_0004 PF00986 DNA gyrase B subunit, carboxyl terminus FORC54_0005 PF00011 Hsp20/alpha crystallin family FORC54_0006 PF03707 Bacterial signalling protein N terminal repeat FORC54_0006 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0006 PF00563 EAL domain FORC54_0007 PF00155 Aminotransferase class I and II FORC54_0010 PF02092 Glycyl-tRNA synthetase beta subunit FORC54_0010 PF05746 DALR anticodon binding domain FORC54_0011 PF02091 Glycyl-tRNA synthetase alpha subunit FORC54_0012 PF01169 Uncharacterized protein family UPF0016 FORC54_0014 PF01206 Sulfurtransferase TusA FORC54_0015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0015 PF03466 LysR substrate binding domain FORC54_0016 PF08240 Alcohol dehydrogenase GroES-like domain FORC54_0016 PF00107 Zinc-binding dehydrogenase FORC54_0017 PF00108 Thiolase, N-terminal domain FORC54_0017 PF02803 Thiolase, C-terminal domain FORC54_0018 PF00378 Enoyl-CoA hydratase/isomerase FORC54_0018 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FORC54_0018 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FORC54_0019 PF09186 Domain of unknown function (DUF1949) FORC54_0019 PF01205 Uncharacterized protein family UPF0029 FORC54_0020 PF02386 Cation transport protein FORC54_0021 PF12724 Flavodoxin domain FORC54_0022 PF13358 DDE superfamily endonuclease FORC54_0024 PF00394 Multicopper oxidase FORC54_0024 PF07731 Multicopper oxidase FORC54_0024 PF07732 Multicopper oxidase FORC54_0025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FORC54_0026 PF01964 Radical SAM ThiC family FORC54_0026 PF13667 ThiC-associated domain FORC54_0027 PF02581 Thiamine monophosphate synthase FORC54_0028 PF00899 ThiF family FORC54_0030 PF05690 Thiazole biosynthesis protein ThiG FORC54_0031 PF04055 Radical SAM superfamily FORC54_0031 PF06968 Biotin and Thiamin Synthesis associated domain FORC54_0032 PF00557 Metallopeptidase family M24 FORC54_0032 PF01321 Creatinase/Prolidase N-terminal domain FORC54_0032 PF00557 Metallopeptidase family M24 FORC54_0032 PF01321 Creatinase/Prolidase N-terminal domain FORC54_0033 PF03466 LysR substrate binding domain FORC54_0033 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0034 PF07690 Major Facilitator Superfamily FORC54_0038 PF05114 Protein of unknown function (DUF692) FORC54_0040 PF13361 UvrD-like helicase C-terminal domain FORC54_0040 PF00580 UvrD/REP helicase N-terminal domain FORC54_0041 PF01810 LysE type translocator FORC54_0043 PF00892 EamA-like transporter family FORC54_0044 PF00570 HRDC domain FORC54_0044 PF09382 RQC domain FORC54_0044 PF00271 Helicase conserved C-terminal domain FORC54_0044 PF00270 DEAD/DEAH box helicase FORC54_0044 PF16124 RecQ zinc-binding FORC54_0046 PF02592 Putative vitamin uptake transporter FORC54_0047 PF02541 Ppx/GppA phosphatase family FORC54_0048 PF00271 Helicase conserved C-terminal domain FORC54_0048 PF00270 DEAD/DEAH box helicase FORC54_0049 PF00085 Thioredoxin FORC54_0050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC54_0050 PF07497 Rho termination factor, RNA-binding domain FORC54_0050 PF07498 Rho termination factor, N-terminal domain FORC54_0052 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FORC54_0053 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_0053 PF00970 Oxidoreductase FAD-binding domain FORC54_0053 PF00175 Oxidoreductase NAD-binding domain FORC54_0054 PF00175 Oxidoreductase NAD-binding domain FORC54_0055 PF13358 DDE superfamily endonuclease FORC54_0059 PF02646 RmuC family FORC54_0060 PF01209 ubiE/COQ5 methyltransferase family FORC54_0061 PF02036 SCP-2 sterol transfer family FORC54_0062 PF03109 ABC1 family FORC54_0063 PF02416 mttA/Hcf106 family FORC54_0064 PF02416 mttA/Hcf106 family FORC54_0065 PF00902 Sec-independent protein translocase protein (TatC) FORC54_0066 PF01026 TatD related DNase FORC54_0067 PF00490 Delta-aminolevulinic acid dehydratase FORC54_0068 PF00476 DNA polymerase family A FORC54_0068 PF01367 5'-3' exonuclease, C-terminal SAM fold FORC54_0068 PF01612 3'-5' exonuclease FORC54_0068 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FORC54_0069 PF01926 50S ribosome-binding GTPase FORC54_0070 PF00034 Cytochrome c FORC54_0072 PF04220 Der GTPase activator (YihI) FORC54_0073 PF10675 Protein of unknown function (DUF2489) FORC54_0074 PF04055 Radical SAM superfamily FORC54_0074 PF06969 HemN C-terminal domain FORC54_0075 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0075 PF03707 Bacterial signalling protein N terminal repeat FORC54_0075 PF13188 PAS domain FORC54_0075 PF00563 EAL domain FORC54_0076 PF02954 Bacterial regulatory protein, Fis family FORC54_0076 PF00072 Response regulator receiver domain FORC54_0076 PF00158 Sigma-54 interaction domain FORC54_0077 PF00989 PAS fold FORC54_0077 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0079 PF03951 Glutamine synthetase, beta-Grasp domain FORC54_0079 PF00120 Glutamine synthetase, catalytic domain FORC54_0083 PF03631 Virulence factor BrkB FORC54_0084 PF02580 D-Tyr-tRNA(Tyr) deacylase FORC54_0085 PF09500 Putative thioesterase (yiiD_Cterm) FORC54_0085 PF00583 Acetyltransferase (GNAT) family FORC54_0087 PF01293 Phosphoenolpyruvate carboxykinase FORC54_0088 PF01430 Hsp33 protein FORC54_0089 PF01479 S4 domain FORC54_0091 PF11356 Type II secretion system protein C FORC54_0092 PF00263 Bacterial type II and III secretion system protein FORC54_0092 PF03958 Bacterial type II/III secretion system short domain FORC54_0093 PF00437 Type II/IV secretion system protein FORC54_0094 PF00482 Type II secretion system (T2SS), protein F FORC54_0095 PF08334 Type II secretion system (T2SS), protein G FORC54_0095 PF07963 Prokaryotic N-terminal methylation motif FORC54_0096 PF12019 Type II transport protein GspH FORC54_0097 PF02501 Type II secretion system (T2SS), protein I FORC54_0097 PF07963 Prokaryotic N-terminal methylation motif FORC54_0098 PF07963 Prokaryotic N-terminal methylation motif FORC54_0098 PF11612 Type II secretion system (T2SS), protein J FORC54_0099 PF03934 Type II secretion system (T2SS), protein K FORC54_0100 PF12693 GspL periplasmic domain FORC54_0100 PF05134 Type II secretion system (T2SS), protein L FORC54_0101 PF04612 Type II secretion system (T2SS), protein M FORC54_0102 PF01203 Type II secretion system (T2SS), protein N FORC54_0103 PF00459 Inositol monophosphatase family FORC54_0104 PF00293 NUDIX domain FORC54_0105 PF01521 Iron-sulphur cluster biosynthesis FORC54_0105 PF01106 NifU-like domain FORC54_0107 PF00561 alpha/beta hydrolase fold FORC54_0109 PF17674 HHH domain FORC54_0109 PF16921 Tex protein YqgF-like domain FORC54_0109 PF00575 S1 RNA binding domain FORC54_0109 PF09371 Tex-like protein N-terminal domain FORC54_0111 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC54_0111 PF03449 Transcription elongation factor, N-terminal FORC54_0112 PF00106 short chain dehydrogenase FORC54_0113 PF13411 MerR HTH family regulatory protein FORC54_0116 PF00005 ABC transporter FORC54_0117 PF02653 Branched-chain amino acid transport system / permease component FORC54_0118 PF00933 Glycosyl hydrolase family 3 N terminal domain FORC54_0118 PF01915 Glycosyl hydrolase family 3 C-terminal domain FORC54_0119 PF00072 Response regulator receiver domain FORC54_0119 PF00486 Transcriptional regulatory protein, C terminal FORC54_0120 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0120 PF00672 HAMP domain FORC54_0121 PF00860 Permease family FORC54_0122 PF00271 Helicase conserved C-terminal domain FORC54_0122 PF17191 RecG wedge domain FORC54_0122 PF00270 DEAD/DEAH box helicase FORC54_0123 PF00588 SpoU rRNA Methylase family FORC54_0123 PF12105 SpoU, rRNA methylase, C-terminal FORC54_0124 PF13291 ACT domain FORC54_0124 PF02824 TGS domain FORC54_0124 PF04607 Region found in RelA / SpoT proteins FORC54_0126 PF00625 Guanylate kinase FORC54_0129 PF02472 Biopolymer transport protein ExbD/TolR FORC54_0130 PF01618 MotA/TolQ/ExbB proton channel family FORC54_0131 PF01618 MotA/TolQ/ExbB proton channel family FORC54_0133 PF07715 TonB-dependent Receptor Plug Domain FORC54_0133 PF00593 TonB dependent receptor FORC54_0135 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0136 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0136 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_0137 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_0138 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_0138 PF00005 ABC transporter FORC54_0139 PF00005 ABC transporter FORC54_0139 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_0144 PF00892 EamA-like transporter family FORC54_0145 PF08340 Domain of unknown function (DUF1732) FORC54_0145 PF03755 YicC-like family, N-terminal region FORC54_0146 PF01138 3' exoribonuclease family, domain 1 FORC54_0146 PF03725 3' exoribonuclease family, domain 2 FORC54_0147 PF00156 Phosphoribosyl transferase domain FORC54_0148 PF03279 Bacterial lipid A biosynthesis acyltransferase FORC54_0149 PF00440 Bacterial regulatory proteins, tetR family FORC54_0150 PF04127 DNA / pantothenate metabolism flavoprotein FORC54_0150 PF02441 Flavoprotein FORC54_0151 PF02743 Cache domain FORC54_0151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_0151 PF00672 HAMP domain FORC54_0152 PF04002 RadC-like JAB domain FORC54_0153 PF00830 Ribosomal L28 family FORC54_0154 PF00471 Ribosomal protein L33 FORC54_0156 PF06827 Zinc finger found in FPG and IleRS FORC54_0156 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FORC54_0156 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FORC54_0158 PF01467 Cytidylyltransferase-like FORC54_0159 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC54_0160 PF00535 Glycosyl transferase family 2 FORC54_0161 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC54_0162 PF01219 Prokaryotic diacylglycerol kinase FORC54_0165 PF11893 Domain of unknown function (DUF3413) FORC54_0165 PF00884 Sulfatase FORC54_0168 PF02719 Polysaccharide biosynthesis protein FORC54_0170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FORC54_0173 PF00117 Glutamine amidotransferase class-I FORC54_0174 PF00977 Histidine biosynthesis protein FORC54_0175 PF02348 Cytidylyltransferase FORC54_0175 PF13472 GDSL-like Lipase/Acylhydrolase family FORC54_0177 PF08666 SAF domain FORC54_0177 PF03102 NeuB family FORC54_0179 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FORC54_0181 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FORC54_0182 PF03279 Bacterial lipid A biosynthesis acyltransferase FORC54_0183 PF01370 NAD dependent epimerase/dehydratase family FORC54_0184 PF06082 Exopolysaccharide biosynthesis protein YbjH FORC54_0186 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FORC54_0191 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FORC54_0191 PF02563 Polysaccharide biosynthesis/export protein FORC54_0191 PF10531 SLBB domain FORC54_0193 PF01451 Low molecular weight phosphotyrosine protein phosphatase FORC54_0194 PF02706 Chain length determinant protein FORC54_0194 PF13614 AAA domain FORC54_0194 PF13807 G-rich domain on putative tyrosine kinase FORC54_0195 PF16363 GDP-mannose 4,6 dehydratase FORC54_0196 PF00483 Nucleotidyl transferase FORC54_0197 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FORC54_0200 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_0201 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_0204 PF00534 Glycosyl transferases group 1 FORC54_0205 PF00534 Glycosyl transferases group 1 FORC54_0205 PF09318 Glycosyl transferase 1 domain A FORC54_0206 PF00483 Nucleotidyl transferase FORC54_0206 PF01050 Mannose-6-phosphate isomerase FORC54_0207 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC54_0207 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC54_0207 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC54_0207 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC54_0208 PF01238 Phosphomannose isomerase type I FORC54_0210 PF02397 Bacterial sugar transferase FORC54_0211 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FORC54_0211 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FORC54_0211 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FORC54_0215 PF10996 Beta-Casp domain FORC54_0215 PF00753 Metallo-beta-lactamase superfamily FORC54_0215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FORC54_0216 PF00338 Ribosomal protein S10p/S20e FORC54_0217 PF00297 Ribosomal protein L3 FORC54_0218 PF00573 Ribosomal protein L4/L1 family FORC54_0219 PF00276 Ribosomal protein L23 FORC54_0220 PF00181 Ribosomal Proteins L2, RNA binding domain FORC54_0220 PF03947 Ribosomal Proteins L2, C-terminal domain FORC54_0221 PF00203 Ribosomal protein S19 FORC54_0222 PF00237 Ribosomal protein L22p/L17e FORC54_0223 PF07650 KH domain FORC54_0223 PF00189 Ribosomal protein S3, C-terminal domain FORC54_0224 PF00252 Ribosomal protein L16p/L10e FORC54_0225 PF00831 Ribosomal L29 protein FORC54_0226 PF00366 Ribosomal protein S17 FORC54_0227 PF00238 Ribosomal protein L14p/L23e FORC54_0228 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FORC54_0228 PF00467 KOW motif FORC54_0229 PF00281 Ribosomal protein L5 FORC54_0229 PF00673 ribosomal L5P family C-terminus FORC54_0230 PF00253 Ribosomal protein S14p/S29e FORC54_0231 PF00410 Ribosomal protein S8 FORC54_0232 PF00347 Ribosomal protein L6 FORC54_0233 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FORC54_0234 PF00333 Ribosomal protein S5, N-terminal domain FORC54_0234 PF03719 Ribosomal protein S5, C-terminal domain FORC54_0235 PF00327 Ribosomal protein L30p/L7e FORC54_0236 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FORC54_0237 PF00344 SecY translocase FORC54_0238 PF00444 Ribosomal protein L36 FORC54_0239 PF00416 Ribosomal protein S13/S18 FORC54_0240 PF00411 Ribosomal protein S11 FORC54_0241 PF01479 S4 domain FORC54_0241 PF00163 Ribosomal protein S4/S9 N-terminal domain FORC54_0242 PF01000 RNA polymerase Rpb3/RpoA insert domain FORC54_0242 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FORC54_0242 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FORC54_0243 PF01196 Ribosomal protein L17 FORC54_0245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_0245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC54_0246 PF04225 Opacity-associated protein A LysM-like domain FORC54_0246 PF08525 Opacity-associated protein A N-terminal motif FORC54_0248 PF13673 Acetyltransferase (GNAT) domain FORC54_0250 PF02872 5'-nucleotidase, C-terminal domain FORC54_0250 PF00149 Calcineurin-like phosphoesterase FORC54_0251 PF10414 Sirohaem synthase dimerisation region FORC54_0251 PF14824 Sirohaem biosynthesis protein central FORC54_0251 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC54_0252 PF01507 Phosphoadenosine phosphosulfate reductase family FORC54_0253 PF00009 Elongation factor Tu GTP binding domain FORC54_0254 PF03600 Citrate transporter FORC54_0254 PF02080 TrkA-C domain FORC54_0259 PF02687 FtsX-like permease family FORC54_0259 PF12704 MacB-like periplasmic core domain FORC54_0259 PF00005 ABC transporter FORC54_0262 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FORC54_0264 PF01625 Peptide methionine sulfoxide reductase FORC54_0265 PF07244 Surface antigen variable number repeat FORC54_0265 PF17243 POTRA domain TamA domain 1 FORC54_0265 PF01103 Surface antigen FORC54_0266 PF04357 TamB, inner membrane protein subunit of TAM complex FORC54_0267 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FORC54_0269 PF00719 Inorganic pyrophosphatase FORC54_0270 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FORC54_0271 PF01225 Mur ligase family, catalytic domain FORC54_0271 PF08245 Mur ligase middle domain FORC54_0271 PF02875 Mur ligase family, glutamate ligase domain FORC54_0272 PF02441 Flavoprotein FORC54_0274 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0275 PF00005 ABC transporter FORC54_0276 PF04751 Protein of unknown function (DUF615) FORC54_0277 PF01523 Putative modulator of DNA gyrase FORC54_0278 PF00571 CBS domain FORC54_0278 PF01769 Divalent cation transporter FORC54_0278 PF03448 MgtE intracellular N domain FORC54_0279 PF00381 PTS HPr component phosphorylation site FORC54_0280 PF03668 P-loop ATPase protein family FORC54_0281 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_0282 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FORC54_0283 PF00309 Sigma-54 factor, Activator interacting domain (AID) FORC54_0283 PF04963 Sigma-54 factor, core binding domain FORC54_0283 PF04552 Sigma-54, DNA binding domain FORC54_0284 PF00005 ABC transporter FORC54_0284 PF12399 Branched-chain amino acid ATP-binding cassette transporter FORC54_0285 PF03968 OstA-like protein FORC54_0288 PF01380 SIS domain FORC54_0288 PF00571 CBS domain FORC54_0289 PF01699 Sodium/calcium exchanger protein FORC54_0290 PF00005 ABC transporter FORC54_0291 PF02405 Permease MlaE FORC54_0292 PF02470 MlaD protein FORC54_0293 PF05494 MlaC protein FORC54_0295 PF01722 BolA-like protein FORC54_0296 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FORC54_0297 PF01553 Acyltransferase FORC54_0298 PF00582 Universal stress protein family FORC54_0300 PF16868 NMT1-like family FORC54_0301 PF02863 Arginine repressor, C-terminal domain FORC54_0301 PF01316 Arginine repressor, DNA binding domain FORC54_0302 PF00056 lactate/malate dehydrogenase, NAD binding domain FORC54_0302 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FORC54_0303 PF00348 Polyprenyl synthetase FORC54_0304 PF00829 Ribosomal prokaryotic L21 protein FORC54_0305 PF01016 Ribosomal L27 protein FORC54_0306 PF01018 GTP1/OBG FORC54_0306 PF01926 50S ribosome-binding GTPase FORC54_0307 PF06738 Putative threonine/serine exporter FORC54_0308 PF12821 Threonine/Serine exporter, ThrE FORC54_0309 PF00186 Dihydrofolate reductase FORC54_0310 PF00149 Calcineurin-like phosphoesterase FORC54_0311 PF04379 ApaG domain FORC54_0312 PF00398 Ribosomal RNA adenine dimethylase FORC54_0313 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FORC54_0314 PF09312 SurA N-terminal domain FORC54_0314 PF00639 PPIC-type PPIASE domain FORC54_0315 PF03968 OstA-like protein FORC54_0315 PF04453 LPS transport system D FORC54_0316 PF00226 DnaJ domain FORC54_0316 PF05099 Tellurite resistance protein TerB FORC54_0318 PF00694 Aconitase C-terminal domain FORC54_0319 PF00330 Aconitase family (aconitate hydratase) FORC54_0320 PF00180 Isocitrate/isopropylmalate dehydrogenase FORC54_0321 PF08502 LeuA allosteric (dimerisation) domain FORC54_0321 PF00682 HMGL-like FORC54_0323 PF01569 PAP2 superfamily FORC54_0325 PF03466 LysR substrate binding domain FORC54_0325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0326 PF00501 AMP-binding enzyme FORC54_0327 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC54_0327 PF00205 Thiamine pyrophosphate enzyme, central domain FORC54_0327 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC54_0328 PF10369 Small subunit of acetolactate synthase FORC54_0329 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0329 PF07694 5TMR of 5TMR-LYT FORC54_0331 PF00224 Pyruvate kinase, barrel domain FORC54_0331 PF02887 Pyruvate kinase, alpha/beta domain FORC54_0332 PF08220 DeoR-like helix-turn-helix domain FORC54_0332 PF00455 DeoR C terminal sensor domain FORC54_0333 PF01380 SIS domain FORC54_0334 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC54_0337 PF07804 HipA-like C-terminal domain FORC54_0337 PF13657 HipA N-terminal domain FORC54_0341 PF17853 GGDEF-like domain FORC54_0341 PF12833 Helix-turn-helix domain FORC54_0344 PF04717 Type VI secretion system, phage-baseplate injector FORC54_0354 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_0354 PF17871 AAA lid domain FORC54_0354 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_0354 PF07724 AAA domain (Cdc48 subfamily) FORC54_0355 PF07478 D-ala D-ala ligase C-terminus FORC54_0355 PF01820 D-ala D-ala ligase N-terminus FORC54_0369 PF02371 Transposase IS116/IS110/IS902 family FORC54_0369 PF01548 Transposase FORC54_0370 PF04002 RadC-like JAB domain FORC54_0373 PF06803 Protein of unknown function (DUF1232) FORC54_0380 PF01609 Transposase DDE domain FORC54_0380 PF13006 Insertion element 4 transposase N-terminal FORC54_0385 PF13356 Arm DNA-binding domain FORC54_0385 PF00589 Phage integrase family FORC54_0386 PF04546 Sigma-70, non-essential region FORC54_0386 PF03979 Sigma-70 factor, region 1.1 FORC54_0386 PF00140 Sigma-70 factor, region 1.2 FORC54_0386 PF04539 Sigma-70 region 3 FORC54_0386 PF04545 Sigma-70, region 4 FORC54_0386 PF04542 Sigma-70 region 2 FORC54_0387 PF10410 DnaB-helicase binding domain of primase FORC54_0387 PF01807 CHC2 zinc finger FORC54_0387 PF08275 DNA primase catalytic core, N-terminal domain FORC54_0387 PF08278 DNA primase DnaG DnaB-binding FORC54_0388 PF09424 Yqey-like protein FORC54_0389 PF01165 Ribosomal protein S21 FORC54_0391 PF00814 Glycoprotease family FORC54_0392 PF12697 Alpha/beta hydrolase family FORC54_0393 PF02660 Glycerol-3-phosphate acyltransferase FORC54_0394 PF02152 Dihydroneopterin aldolase FORC54_0395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FORC54_0396 PF02673 Bacitracin resistance protein BacA FORC54_0397 PF01743 Poly A polymerase head domain FORC54_0397 PF12627 Probable RNA and SrmB- binding site of polymerase A FORC54_0397 PF01966 HD domain FORC54_0398 PF13401 AAA domain FORC54_0398 PF01471 Putative peptidoglycan binding domain FORC54_0399 PF08239 Bacterial SH3 domain FORC54_0400 PF01384 Phosphate transporter family FORC54_0401 PF01865 Protein of unknown function DUF47 FORC54_0402 PF01928 CYTH domain FORC54_0403 PF07885 Ion channel FORC54_0404 PF12729 Four helix bundle sensory module for signal transduction FORC54_0404 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_0404 PF00672 HAMP domain FORC54_0405 PF08335 GlnD PII-uridylyltransferase FORC54_0405 PF03710 Glutamate-ammonia ligase adenylyltransferase FORC54_0406 PF01467 Cytidylyltransferase-like FORC54_0406 PF00294 pfkB family carbohydrate kinase FORC54_0407 PF02321 Outer membrane efflux protein FORC54_0408 PF00293 NUDIX domain FORC54_0409 PF06853 Protein of unknown function (DUF1249) FORC54_0410 PF00149 Calcineurin-like phosphoesterase FORC54_0411 PF05728 Uncharacterised protein family (UPF0227) FORC54_0412 PF01751 Toprim domain FORC54_0412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0412 PF00204 DNA gyrase B FORC54_0412 PF00986 DNA gyrase B subunit, carboxyl terminus FORC54_0413 PF00521 DNA gyrase/topoisomerase IV, subunit A FORC54_0413 PF03989 DNA gyrase C-terminal domain, beta-propeller FORC54_0414 PF13180 PDZ domain FORC54_0415 PF00595 PDZ domain FORC54_0416 PF06295 Protein of unknown function (DUF1043) FORC54_0417 PF03969 AFG1-like ATPase FORC54_0418 PF00572 Ribosomal protein L13 FORC54_0419 PF00380 Ribosomal protein S9/S16 FORC54_0420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FORC54_0420 PF00355 Rieske [2Fe-2S] domain FORC54_0421 PF00033 Cytochrome b/b6/petB FORC54_0421 PF00032 Cytochrome b(C-terminal)/b6/petD FORC54_0422 PF02167 Cytochrome C1 family FORC54_0423 PF00043 Glutathione S-transferase, C-terminal domain FORC54_0423 PF02798 Glutathione S-transferase, N-terminal domain FORC54_0424 PF04386 Stringent starvation protein B FORC54_0425 PF04972 BON domain FORC54_0426 PF13580 SIS domain FORC54_0427 PF02021 Uncharacterised protein family UPF0102 FORC54_0428 PF04348 LppC putative lipoprotein FORC54_0429 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC54_0430 PF01795 MraW methylase family FORC54_0431 PF04999 Cell division protein FtsL FORC54_0432 PF00905 Penicillin binding protein transpeptidase domain FORC54_0432 PF03717 Penicillin-binding Protein dimerisation domain FORC54_0433 PF01225 Mur ligase family, catalytic domain FORC54_0433 PF08245 Mur ligase middle domain FORC54_0433 PF02875 Mur ligase family, glutamate ligase domain FORC54_0434 PF01225 Mur ligase family, catalytic domain FORC54_0434 PF08245 Mur ligase middle domain FORC54_0434 PF02875 Mur ligase family, glutamate ligase domain FORC54_0435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FORC54_0435 PF00953 Glycosyl transferase family 4 FORC54_0436 PF08245 Mur ligase middle domain FORC54_0436 PF02875 Mur ligase family, glutamate ligase domain FORC54_0437 PF01098 Cell cycle protein FORC54_0438 PF04101 Glycosyltransferase family 28 C-terminal domain FORC54_0438 PF03033 Glycosyltransferase family 28 N-terminal domain FORC54_0439 PF08245 Mur ligase middle domain FORC54_0439 PF02875 Mur ligase family, glutamate ligase domain FORC54_0439 PF01225 Mur ligase family, catalytic domain FORC54_0440 PF03799 Cell division protein FtsQ FORC54_0440 PF08478 POTRA domain, FtsQ-type FORC54_0441 PF02491 SHS2 domain inserted in FTSA FORC54_0442 PF12327 FtsZ family, C-terminal domain FORC54_0442 PF00091 Tubulin/FtsZ family, GTPase domain FORC54_0443 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FORC54_0445 PF07516 SecA Wing and Scaffold domain FORC54_0445 PF01043 SecA preprotein cross-linking domain FORC54_0445 PF07517 SecA DEAD-like domain FORC54_0445 PF02810 SEC-C motif FORC54_0446 PF00293 NUDIX domain FORC54_0447 PF01113 Dihydrodipicolinate reductase, N-terminus FORC54_0447 PF05173 Dihydrodipicolinate reductase, C-terminus FORC54_0448 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FORC54_0448 PF00117 Glutamine amidotransferase class-I FORC54_0449 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FORC54_0449 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FORC54_0449 PF02142 MGS-like domain FORC54_0452 PF01925 Sulfite exporter TauE/SafE FORC54_0453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0453 PF03466 LysR substrate binding domain FORC54_0454 PF03458 UPF0126 domain FORC54_0455 PF01497 Periplasmic binding protein FORC54_0456 PF17113 Regulatory signalling modulator protein AmpE FORC54_0456 PF03186 CobD/Cbib protein FORC54_0457 PF01048 Phosphorylase superfamily FORC54_0459 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FORC54_0459 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_0460 PF00310 Glutamine amidotransferases class-II FORC54_0460 PF01645 Conserved region in glutamate synthase FORC54_0460 PF04898 Glutamate synthase central domain FORC54_0460 PF01493 GXGXG motif FORC54_0461 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FORC54_0461 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_0462 PF04898 Glutamate synthase central domain FORC54_0462 PF01645 Conserved region in glutamate synthase FORC54_0462 PF01493 GXGXG motif FORC54_0462 PF00310 Glutamine amidotransferases class-II FORC54_0463 PF04055 Radical SAM superfamily FORC54_0463 PF16199 Radical_SAM C-terminal domain FORC54_0464 PF00563 EAL domain FORC54_0464 PF01590 GAF domain FORC54_0464 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0464 PF00360 Phytochrome region FORC54_0465 PF00072 Response regulator receiver domain FORC54_0465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0465 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0465 PF18415 Histidine kinase receptor ArcB trans-membrane domain FORC54_0465 PF01627 Hpt domain FORC54_0465 PF00989 PAS fold FORC54_0467 PF00072 Response regulator receiver domain FORC54_0467 PF00486 Transcriptional regulatory protein, C terminal FORC54_0469 PF03737 Aldolase/RraA FORC54_0471 PF00742 Homoserine dehydrogenase FORC54_0471 PF03447 Homoserine dehydrogenase, NAD binding domain FORC54_0471 PF01842 ACT domain FORC54_0471 PF00696 Amino acid kinase family FORC54_0471 PF13840 ACT domain FORC54_0472 PF08544 GHMP kinases C terminal FORC54_0472 PF00288 GHMP kinases N terminal domain FORC54_0473 PF00291 Pyridoxal-phosphate dependent enzyme FORC54_0473 PF14821 Threonine synthase N terminus FORC54_0474 PF01228 Glycine radical FORC54_0475 PF01261 Xylose isomerase-like TIM barrel FORC54_0476 PF03167 Uracil DNA glycosylase superfamily FORC54_0479 PF01235 Sodium:alanine symporter family FORC54_0480 PF03883 Peroxide stress protein YaaA FORC54_0481 PF00271 Helicase conserved C-terminal domain FORC54_0481 PF00270 DEAD/DEAH box helicase FORC54_0482 PF05175 Methyltransferase small domain FORC54_0483 PF05525 Branched-chain amino acid transport protein FORC54_0484 PF00258 Flavodoxin FORC54_0485 PF00589 Phage integrase family FORC54_0485 PF02899 Phage integrase, N-terminal SAM-like domain FORC54_0486 PF10411 Disulfide bond isomerase protein N-terminus FORC54_0486 PF13098 Thioredoxin-like domain FORC54_0487 PF01368 DHH family FORC54_0487 PF02272 DHHA1 domain FORC54_0487 PF17768 RecJ OB domain FORC54_0488 PF03462 PCRF domain FORC54_0488 PF00472 RF-1 domain FORC54_0489 PF01336 OB-fold nucleic acid binding domain FORC54_0489 PF00152 tRNA synthetases class II (D, K and N) FORC54_0490 PF02954 Bacterial regulatory protein, Fis family FORC54_0490 PF00158 Sigma-54 interaction domain FORC54_0490 PF02830 V4R domain FORC54_0490 PF06505 Activator of aromatic catabolism FORC54_0492 PF00248 Aldo/keto reductase family FORC54_0493 PF00248 Aldo/keto reductase family FORC54_0495 PF02976 DNA mismatch repair enzyme MutH FORC54_0496 PF00293 NUDIX domain FORC54_0497 PF02896 PEP-utilising enzyme, TIM barrel domain FORC54_0497 PF00391 PEP-utilising enzyme, mobile domain FORC54_0497 PF05524 PEP-utilising enzyme, N-terminal FORC54_0497 PF01590 GAF domain FORC54_0498 PF01925 Sulfite exporter TauE/SafE FORC54_0499 PF01790 Prolipoprotein diacylglyceryl transferase FORC54_0500 PF00303 Thymidylate synthase FORC54_0502 PF02690 Na+/Pi-cotransporter FORC54_0503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0503 PF03466 LysR substrate binding domain FORC54_0504 PF01022 Bacterial regulatory protein, arsR family FORC54_0505 PF01649 Ribosomal protein S20 FORC54_0506 PF03023 Lipid II flippase MurJ FORC54_0507 PF01687 Riboflavin kinase FORC54_0507 PF06574 FAD synthetase FORC54_0508 PF08264 Anticodon-binding domain of tRNA FORC54_0508 PF06827 Zinc finger found in FPG and IleRS FORC54_0508 PF00133 tRNA synthetases class I (I, L, M and V) FORC54_0509 PF01252 Signal peptidase (SPase) II FORC54_0510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_0511 PF02401 LytB protein FORC54_0512 PF00072 Response regulator receiver domain FORC54_0512 PF04397 LytTr DNA-binding domain FORC54_0513 PF06580 Histidine kinase FORC54_0513 PF07694 5TMR of 5TMR-LYT FORC54_0514 PF02554 Carbon starvation protein CstA FORC54_0518 PF03702 Anhydro-N-acetylmuramic acid kinase FORC54_0519 PF00933 Glycosyl hydrolase family 3 N terminal domain FORC54_0520 PF00793 DAHP synthetase I family FORC54_0521 PF01817 Chorismate mutase type II FORC54_0521 PF02153 Prephenate dehydrogenase FORC54_0522 PF04225 Opacity-associated protein A LysM-like domain FORC54_0522 PF01551 Peptidase family M23 FORC54_0523 PF07238 PilZ domain FORC54_0524 PF12848 ABC transporter FORC54_0524 PF00005 ABC transporter FORC54_0525 PF01464 Transglycosylase SLT domain FORC54_0525 PF14718 Soluble lytic murein transglycosylase L domain FORC54_0526 PF01371 Trp repressor protein FORC54_0527 PF01931 Protein of unknown function DUF84 FORC54_0528 PF00800 Prephenate dehydratase FORC54_0528 PF01817 Chorismate mutase type II FORC54_0529 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FORC54_0530 PF13525 Outer membrane lipoprotein FORC54_0531 PF01479 S4 domain FORC54_0531 PF00849 RNA pseudouridylate synthase FORC54_0533 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_0533 PF07724 AAA domain (Cdc48 subfamily) FORC54_0533 PF17871 AAA lid domain FORC54_0533 PF02861 Clp amino terminal domain, pathogenicity island component FORC54_0533 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_0534 PF03411 Penicillin-insensitive murein endopeptidase FORC54_0535 PF00037 4Fe-4S binding domain FORC54_0537 PF04381 Putative exonuclease, RdgC FORC54_0538 PF00072 Response regulator receiver domain FORC54_0538 PF00486 Transcriptional regulatory protein, C terminal FORC54_0539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0539 PF11808 Phosphate regulon sensor protein PhoR FORC54_0539 PF00989 PAS fold FORC54_0539 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0540 PF12849 PBP superfamily domain FORC54_0541 PF02541 Ppx/GppA phosphatase family FORC54_0542 PF13089 Polyphosphate kinase N-terminal domain FORC54_0542 PF02503 Polyphosphate kinase middle domain FORC54_0542 PF17941 Polyphosphate kinase C-terminal domain 1 FORC54_0542 PF13090 Polyphosphate kinase C-terminal domain 2 FORC54_0543 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0544 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0545 PF00005 ABC transporter FORC54_0546 PF01895 PhoU domain FORC54_0547 PF03976 Polyphosphate kinase 2 (PPK2) FORC54_0548 PF03932 CutC family FORC54_0549 PF10417 C-terminal domain of 1-Cys peroxiredoxin FORC54_0549 PF00578 AhpC/TSA family FORC54_0550 PF03466 LysR substrate binding domain FORC54_0550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0551 PF01274 Malate synthase FORC54_0552 PF00463 Isocitrate lyase family FORC54_0553 PF00571 CBS domain FORC54_0555 PF02547 Queuosine biosynthesis protein FORC54_0556 PF01702 Queuine tRNA-ribosyltransferase FORC54_0557 PF02699 Preprotein translocase subunit FORC54_0558 PF07549 SecD/SecF GG Motif FORC54_0558 PF02355 Protein export membrane protein FORC54_0558 PF13721 SecD export protein N-terminal TM region FORC54_0559 PF07549 SecD/SecF GG Motif FORC54_0559 PF02355 Protein export membrane protein FORC54_0562 PF00459 Inositol monophosphatase family FORC54_0563 PF00588 SpoU rRNA Methylase family FORC54_0564 PF02082 Transcriptional regulator FORC54_0565 PF00266 Aminotransferase class-V FORC54_0566 PF01592 NifU-like N terminal domain FORC54_0567 PF01521 Iron-sulphur cluster biosynthesis FORC54_0568 PF00226 DnaJ domain FORC54_0568 PF07743 HSCB C-terminal oligomerisation domain FORC54_0569 PF00012 Hsp70 protein FORC54_0570 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_0571 PF04384 Iron-sulphur cluster assembly FORC54_0572 PF12404 Peptidase FORC54_0572 PF00883 Cytosol aminopeptidase family, catalytic domain FORC54_0573 PF00334 Nucleoside diphosphate kinase FORC54_0574 PF04055 Radical SAM superfamily FORC54_0575 PF13464 Domain of unknown function (DUF4115) FORC54_0576 PF04551 GcpE protein FORC54_0577 PF13393 Histidyl-tRNA synthetase FORC54_0577 PF03129 Anticodon binding domain FORC54_0578 PF09976 Tetratricopeptide repeat-like domain FORC54_0579 PF13360 PQQ-like domain FORC54_0580 PF01926 50S ribosome-binding GTPase FORC54_0580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FORC54_0582 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0582 PF13185 GAF domain FORC54_0584 PF02601 Exonuclease VII, large subunit FORC54_0584 PF13742 OB-fold nucleic acid binding domain FORC54_0585 PF00478 IMP dehydrogenase / GMP reductase domain FORC54_0585 PF00571 CBS domain FORC54_0586 PF02540 NAD synthase FORC54_0586 PF00117 Glutamine amidotransferase class-I FORC54_0586 PF00958 GMP synthase C terminal domain FORC54_0587 PF00704 Glycosyl hydrolases family 18 FORC54_0587 PF06483 Chitinase C FORC54_0588 PF01184 GPR1/FUN34/yaaH family FORC54_0589 PF01235 Sodium:alanine symporter family FORC54_0590 PF01266 FAD dependent oxidoreductase FORC54_0591 PF01266 FAD dependent oxidoreductase FORC54_0592 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0592 PF03466 LysR substrate binding domain FORC54_0593 PF07885 Ion channel FORC54_0594 PF02028 BCCT, betaine/carnitine/choline family transporter FORC54_0596 PF01300 Telomere recombination FORC54_0596 PF03481 Putative GTP-binding controlling metal-binding FORC54_0612 PF01527 Transposase FORC54_0613 PF01548 Transposase FORC54_0613 PF02371 Transposase IS116/IS110/IS902 family FORC54_0614 PF00665 Integrase core domain FORC54_0615 PF01668 SmpB protein FORC54_0616 PF03364 Polyketide cyclase / dehydrase and lipid transport FORC54_0617 PF03658 RnfH family Ubiquitin FORC54_0618 PF04355 SmpA / OmlA family FORC54_0619 PF02463 RecF/RecN/SMC N terminal domain FORC54_0620 PF01513 ATP-NAD kinase FORC54_0621 PF01025 GrpE FORC54_0622 PF00375 Sodium:dicarboxylate symporter family FORC54_0625 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_0630 PF00012 Hsp70 protein FORC54_0631 PF01556 DnaJ C terminal domain FORC54_0631 PF00226 DnaJ domain FORC54_0631 PF00684 DnaJ central domain FORC54_0632 PF00114 Pilin (bacterial filament) FORC54_0632 PF07963 Prokaryotic N-terminal methylation motif FORC54_0637 PF03806 AbgT putative transporter family FORC54_0638 PF00756 Putative esterase FORC54_0639 PF00107 Zinc-binding dehydrogenase FORC54_0639 PF08240 Alcohol dehydrogenase GroES-like domain FORC54_0640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0640 PF03466 LysR substrate binding domain FORC54_0641 PF14437 MafB19-like deaminase FORC54_0642 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_0642 PF01464 Transglycosylase SLT domain FORC54_0643 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FORC54_0643 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FORC54_0643 PF02769 AIR synthase related protein, C-terminal domain FORC54_0648 PF01546 Peptidase family M20/M25/M40 FORC54_0648 PF07687 Peptidase dimerisation domain FORC54_0649 PF00860 Permease family FORC54_0650 PF00156 Phosphoribosyl transferase domain FORC54_0652 PF07417 Sigma factor-binding transcriptional regulator Crl FORC54_0653 PF00696 Amino acid kinase family FORC54_0653 PF01472 PUA domain FORC54_0654 PF00171 Aldehyde dehydrogenase family FORC54_0655 PF03477 ATP cone domain FORC54_0656 PF01872 RibD C-terminal domain FORC54_0656 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC54_0657 PF00677 Lumazine binding domain FORC54_0658 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FORC54_0658 PF00925 GTP cyclohydrolase II FORC54_0659 PF00885 6,7-dimethyl-8-ribityllumazine synthase FORC54_0660 PF01029 NusB family FORC54_0661 PF00586 AIR synthase related protein, N-terminal domain FORC54_0661 PF02769 AIR synthase related protein, C-terminal domain FORC54_0662 PF04608 Phosphatidylglycerophosphatase A FORC54_0663 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_0664 PF02780 Transketolase, C-terminal domain FORC54_0664 PF02779 Transketolase, pyrimidine binding domain FORC54_0664 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FORC54_0665 PF00348 Polyprenyl synthetase FORC54_0666 PF02609 Exonuclease VII small subunit FORC54_0668 PF01618 MotA/TolQ/ExbB proton channel family FORC54_0669 PF13677 Membrane MotB of proton-channel complex MotA/MotB FORC54_0669 PF00691 OmpA family FORC54_0670 PF02568 Thiamine biosynthesis protein (ThiI) FORC54_0670 PF02926 THUMP domain FORC54_0672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0672 PF03466 LysR substrate binding domain FORC54_0674 PF04241 Protein of unknown function (DUF423) FORC54_0675 PF01728 FtsJ-like methyltransferase FORC54_0675 PF18125 RlmM ferredoxin-like domain FORC54_0676 PF01223 DNA/RNA non-specific endonuclease FORC54_0677 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FORC54_0677 PF01367 5'-3' exonuclease, C-terminal SAM fold FORC54_0678 PF03641 Possible lysine decarboxylase FORC54_0678 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FORC54_0678 PF11892 Domain of unknown function (DUF3412) FORC54_0679 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0681 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FORC54_0681 PF14489 QueF-like protein FORC54_0682 PF07348 Syd protein (SUKH-2) FORC54_0683 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FORC54_0684 PF03180 NLPA lipoprotein FORC54_0685 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0686 PF00005 ABC transporter FORC54_0686 PF09383 NIL domain FORC54_0688 PF00356 Bacterial regulatory proteins, lacI family FORC54_0689 PF02378 Phosphotransferase system, EIIC FORC54_0689 PF00367 phosphotransferase system, EIIB FORC54_0690 PF00128 Alpha amylase, catalytic domain FORC54_0690 PF16657 Maltogenic Amylase, C-terminal domain FORC54_0698 PF00464 Serine hydroxymethyltransferase FORC54_0700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FORC54_0700 PF04055 Radical SAM superfamily FORC54_0701 PF03099 Biotin/lipoate A/B protein ligase family FORC54_0702 PF04359 Protein of unknown function (DUF493) FORC54_0703 PF00768 D-alanyl-D-alanine carboxypeptidase FORC54_0703 PF07943 Penicillin-binding protein 5, C-terminal domain FORC54_0704 PF03330 Lytic transglycolase FORC54_0704 PF05036 Sporulation related domain FORC54_0705 PF01098 Cell cycle protein FORC54_0706 PF00905 Penicillin binding protein transpeptidase domain FORC54_0706 PF03717 Penicillin-binding Protein dimerisation domain FORC54_0707 PF02590 Predicted SPOUT methyltransferase FORC54_0709 PF06144 DNA polymerase III, delta subunit FORC54_0709 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FORC54_0710 PF04390 Lipopolysaccharide-assembly FORC54_0711 PF00133 tRNA synthetases class I (I, L, M and V) FORC54_0711 PF08264 Anticodon-binding domain of tRNA FORC54_0711 PF13603 Leucyl-tRNA synthetase, Domain 2 FORC54_0712 PF07295 Zinc-ribbon containing domain FORC54_0713 PF00795 Carbon-nitrogen hydrolase FORC54_0714 PF03471 Transporter associated domain FORC54_0714 PF00571 CBS domain FORC54_0715 PF02130 Uncharacterized protein family UPF0054 FORC54_0716 PF02562 PhoH-like protein FORC54_0717 PF04055 Radical SAM superfamily FORC54_0717 PF01938 TRAM domain FORC54_0717 PF00919 Uncharacterized protein family UPF0004 FORC54_0718 PF01494 FAD binding domain FORC54_0719 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_0721 PF06071 Protein of unknown function (DUF933) FORC54_0721 PF01926 50S ribosome-binding GTPase FORC54_0722 PF01195 Peptidyl-tRNA hydrolase FORC54_0723 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FORC54_0723 PF14572 Phosphoribosyl synthetase-associated domain FORC54_0724 PF08544 GHMP kinases C terminal FORC54_0724 PF00288 GHMP kinases N terminal domain FORC54_0725 PF03550 Outer membrane lipoprotein LolB FORC54_0726 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FORC54_0726 PF01488 Shikimate / quinate 5-dehydrogenase FORC54_0726 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FORC54_0727 PF03462 PCRF domain FORC54_0727 PF00472 RF-1 domain FORC54_0728 PF13847 Methyltransferase domain FORC54_0728 PF17827 PrmC N-terminal domain FORC54_0729 PF04247 Invasion gene expression up-regulator, SirB FORC54_0730 PF13369 Transglutaminase-like superfamily FORC54_0731 PF00793 DAHP synthetase I family FORC54_0732 PF00149 Calcineurin-like phosphoesterase FORC54_0732 PF02872 5'-nucleotidase, C-terminal domain FORC54_0733 PF04073 Aminoacyl-tRNA editing domain FORC54_0734 PF00849 RNA pseudouridylate synthase FORC54_0734 PF01479 S4 domain FORC54_0735 PF01713 Smr domain FORC54_0737 PF01963 TraB family FORC54_0738 PF03173 Putative carbohydrate binding domain FORC54_0738 PF00728 Glycosyl hydrolase family 20, catalytic domain FORC54_0738 PF02838 Glycosyl hydrolase family 20, domain 2 FORC54_0738 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FORC54_0740 PF00403 Heavy-metal-associated domain FORC54_0741 PF13609 Gram-negative porin FORC54_0742 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC54_0743 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC54_0751 PF01584 CheW-like domain FORC54_0751 PF00072 Response regulator receiver domain FORC54_0752 PF03705 CheR methyltransferase, all-alpha domain FORC54_0752 PF01739 CheR methyltransferase, SAM binding domain FORC54_0753 PF00460 Flagella basal body rod protein FORC54_0754 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC54_0754 PF00460 Flagella basal body rod protein FORC54_0755 PF13861 FlgD Tudor-like domain FORC54_0755 PF03963 Flagellar hook capping protein - N-terminal region FORC54_0755 PF13860 FlgD Ig-like domain FORC54_0756 PF00460 Flagella basal body rod protein FORC54_0756 PF07559 Flagellar basal body protein FlaE FORC54_0756 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC54_0757 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC54_0757 PF00460 Flagella basal body rod protein FORC54_0758 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC54_0758 PF00460 Flagella basal body rod protein FORC54_0759 PF02107 Flagellar L-ring protein FORC54_0760 PF02119 Flagellar P-ring protein FORC54_0761 PF10135 Rod binding protein FORC54_0761 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FORC54_0762 PF07196 Flagellin hook IN motif FORC54_0762 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FORC54_0763 PF00669 Bacterial flagellin N-terminal helical region FORC54_0764 PF07196 Flagellin hook IN motif FORC54_0764 PF00700 Bacterial flagellin C-terminal helical region FORC54_0764 PF00669 Bacterial flagellin N-terminal helical region FORC54_0766 PF00669 Bacterial flagellin N-terminal helical region FORC54_0766 PF07196 Flagellin hook IN motif FORC54_0766 PF00700 Bacterial flagellin C-terminal helical region FORC54_0767 PF00700 Bacterial flagellin C-terminal helical region FORC54_0767 PF00669 Bacterial flagellin N-terminal helical region FORC54_0767 PF07196 Flagellin hook IN motif FORC54_0768 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FORC54_0769 PF05524 PEP-utilising enzyme, N-terminal FORC54_0769 PF00391 PEP-utilising enzyme, mobile domain FORC54_0769 PF02896 PEP-utilising enzyme, TIM barrel domain FORC54_0770 PF00381 PTS HPr component phosphorylation site FORC54_0771 PF00291 Pyridoxal-phosphate dependent enzyme FORC54_0773 PF04354 ZipA, C-terminal FtsZ-binding domain FORC54_0774 PF12826 Helix-hairpin-helix motif FORC54_0774 PF00533 BRCA1 C Terminus (BRCT) domain FORC54_0774 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FORC54_0774 PF03120 NAD-dependent DNA ligase OB-fold domain FORC54_0774 PF01653 NAD-dependent DNA ligase adenylation domain FORC54_0775 PF13609 Gram-negative porin FORC54_0778 PF16200 C-terminal region of band_7 FORC54_0778 PF01145 SPFH domain / Band 7 family FORC54_0779 PF00085 Thioredoxin FORC54_0780 PF00106 short chain dehydrogenase FORC54_0781 PF08338 Domain of unknown function (DUF1731) FORC54_0781 PF01370 NAD dependent epimerase/dehydratase family FORC54_0782 PF07556 Protein of unknown function (DUF1538) FORC54_0783 PF07556 Protein of unknown function (DUF1538) FORC54_0786 PF12850 Calcineurin-like phosphoesterase superfamily domain FORC54_0789 PF17323 Trans-membrane regulatory protein ToxS FORC54_0790 PF00486 Transcriptional regulatory protein, C terminal FORC54_0791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0791 PF00183 Hsp90 protein FORC54_0792 PF05191 Adenylate kinase, active site lid FORC54_0793 PF00762 Ferrochelatase FORC54_0794 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_0794 PF17200 Single Cache domain 2 FORC54_0794 PF00672 HAMP domain FORC54_0795 PF00854 POT family FORC54_0797 PF00733 Asparagine synthase FORC54_0797 PF13537 Glutamine amidotransferase domain FORC54_0798 PF00999 Sodium/hydrogen exchanger family FORC54_0798 PF02254 TrkA-N domain FORC54_0799 PF00480 ROK family FORC54_0799 PF01047 MarR family FORC54_0800 PF01979 Amidohydrolase family FORC54_0801 PF00367 phosphotransferase system, EIIB FORC54_0801 PF02378 Phosphotransferase system, EIIC FORC54_0802 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC54_0802 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FORC54_0803 PF01475 Ferric uptake regulator family FORC54_0805 PF00258 Flavodoxin FORC54_0807 PF12697 Alpha/beta hydrolase family FORC54_0808 PF03925 SeqA protein C-terminal domain FORC54_0808 PF17206 SeqA protein N-terminal domain FORC54_0809 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC54_0809 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC54_0809 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC54_0809 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC54_0810 PF08348 YheO-like PAS domain FORC54_0810 PF13309 HTH domain FORC54_0811 PF01042 Endoribonuclease L-PSP FORC54_0812 PF00375 Sodium:dicarboxylate symporter family FORC54_0813 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC54_0813 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_0815 PF01784 NIF3 (NGG1p interacting factor 3) FORC54_0816 PF00285 Citrate synthase, C-terminal domain FORC54_0817 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FORC54_0818 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FORC54_0819 PF00890 FAD binding domain FORC54_0819 PF02910 Fumarate reductase flavoprotein C-term FORC54_0820 PF13085 2Fe-2S iron-sulfur cluster binding domain FORC54_0821 PF16078 2-oxoglutarate dehydrogenase N-terminus FORC54_0821 PF02779 Transketolase, pyrimidine binding domain FORC54_0821 PF16870 2-oxoglutarate dehydrogenase C-terminal FORC54_0821 PF00676 Dehydrogenase E1 component FORC54_0822 PF00364 Biotin-requiring enzyme FORC54_0822 PF02817 e3 binding domain FORC54_0822 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FORC54_0823 PF00549 CoA-ligase FORC54_0823 PF08442 ATP-grasp domain FORC54_0824 PF00549 CoA-ligase FORC54_0824 PF02629 CoA binding domain FORC54_0825 PF00950 ABC 3 transport family FORC54_0826 PF00005 ABC transporter FORC54_0827 PF01297 Zinc-uptake complex component A periplasmic FORC54_0829 PF04023 FeoA domain FORC54_0830 PF07664 Ferrous iron transport protein B C terminus FORC54_0830 PF02421 Ferrous iron transport protein B FORC54_0830 PF07670 Nucleoside recognition FORC54_0833 PF05746 DALR anticodon binding domain FORC54_0833 PF00750 tRNA synthetases class I (R) FORC54_0833 PF03485 Arginyl tRNA synthetase N terminal domain FORC54_0834 PF06185 YecM protein FORC54_0835 PF01842 ACT domain FORC54_0835 PF00551 Formyl transferase FORC54_0837 PF13307 Helicase C-terminal domain FORC54_0837 PF04851 Type III restriction enzyme, res subunit FORC54_0838 PF00814 Glycoprotease family FORC54_0841 PF00561 alpha/beta hydrolase fold FORC54_0842 PF13193 AMP-binding enzyme C-terminal domain FORC54_0842 PF00501 AMP-binding enzyme FORC54_0843 PF01612 3'-5' exonuclease FORC54_0843 PF00570 HRDC domain FORC54_0844 PF03776 Septum formation topological specificity factor MinE FORC54_0845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FORC54_0846 PF05209 Septum formation inhibitor MinC, N-terminal domain FORC54_0846 PF03775 Septum formation inhibitor MinC, C-terminal domain FORC54_0847 PF05166 YcgL domain FORC54_0848 PF13406 Transglycosylase SLT domain FORC54_0849 PF03466 LysR substrate binding domain FORC54_0849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_0850 PF01773 Na+ dependent nucleoside transporter N-terminus FORC54_0850 PF07670 Nucleoside recognition FORC54_0850 PF07662 Na+ dependent nucleoside transporter C-terminus FORC54_0853 PF00486 Transcriptional regulatory protein, C terminal FORC54_0853 PF00072 Response regulator receiver domain FORC54_0854 PF18719 ArlS sensor domain FORC54_0854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0854 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0855 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC54_0855 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC54_0858 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC54_0858 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC54_0863 PF00221 Aromatic amino acid lyase FORC54_0864 PF00535 Glycosyl transferase family 2 FORC54_0868 PF00550 Phosphopantetheine attachment site FORC54_0869 PF00550 Phosphopantetheine attachment site FORC54_0874 PF04820 Tryptophan halogenase FORC54_0876 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_0876 PF00672 HAMP domain FORC54_0876 PF02743 Cache domain FORC54_0877 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FORC54_0878 PF00072 Response regulator receiver domain FORC54_0878 PF00486 Transcriptional regulatory protein, C terminal FORC54_0879 PF00672 HAMP domain FORC54_0879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0879 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0880 PF01547 Bacterial extracellular solute-binding protein FORC54_0882 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_0883 PF00005 ABC transporter FORC54_0883 PF17912 MalK OB fold domain FORC54_0883 PF03459 TOBE domain FORC54_0885 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC54_0886 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FORC54_0887 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC54_0889 PF02954 Bacterial regulatory protein, Fis family FORC54_0889 PF00072 Response regulator receiver domain FORC54_0889 PF00158 Sigma-54 interaction domain FORC54_0890 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0890 PF02743 Cache domain FORC54_0891 PF05697 Bacterial trigger factor protein (TF) FORC54_0891 PF05698 Bacterial trigger factor protein (TF) C-terminus FORC54_0891 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_0892 PF00574 Clp protease FORC54_0893 PF07724 AAA domain (Cdc48 subfamily) FORC54_0893 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_0893 PF06689 ClpX C4-type zinc finger FORC54_0894 PF02190 ATP-dependent protease La (LON) substrate-binding domain FORC54_0894 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC54_0894 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_0895 PF00216 Bacterial DNA-binding protein FORC54_0896 PF13145 PPIC-type PPIASE domain FORC54_0900 PF01966 HD domain FORC54_0900 PF13286 Phosphohydrolase-associated domain FORC54_0902 PF00155 Aminotransferase class I and II FORC54_0903 PF00425 chorismate binding enzyme FORC54_0904 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC54_0904 PF16582 Middle domain of thiamine pyrophosphate FORC54_0904 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC54_0905 PF12697 Alpha/beta hydrolase family FORC54_0906 PF00378 Enoyl-CoA hydratase/isomerase FORC54_0907 PF13378 Enolase C-terminal domain-like FORC54_0908 PF00501 AMP-binding enzyme FORC54_0908 PF13193 AMP-binding enzyme C-terminal domain FORC54_0910 PF03601 Conserved hypothetical protein 698 FORC54_0911 PF07690 Major Facilitator Superfamily FORC54_0915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_0916 PF00873 AcrB/AcrD/AcrF family FORC54_0919 PF00291 Pyridoxal-phosphate dependent enzyme FORC54_0920 PF13404 AsnC-type helix-turn-helix domain FORC54_0920 PF01037 Lrp/AsnC ligand binding domain FORC54_0923 PF09619 Type III secretion system lipoprotein chaperone (YscW) FORC54_0924 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FORC54_0926 PF00563 EAL domain FORC54_0926 PF03707 Bacterial signalling protein N terminal repeat FORC54_0926 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0929 PF01145 SPFH domain / Band 7 family FORC54_0930 PF01145 SPFH domain / Band 7 family FORC54_0931 PF06965 Na+/H+ antiporter 1 FORC54_0932 PF07969 Amidohydrolase family FORC54_0935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_0935 PF00672 HAMP domain FORC54_0935 PF02743 Cache domain FORC54_0937 PF01263 Aldose 1-epimerase FORC54_0938 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_0938 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC54_0939 PF01641 SelR domain FORC54_0941 PF07023 Protein of unknown function (DUF1315) FORC54_0942 PF17763 Glutaminase/Asparaginase C-terminal domain FORC54_0942 PF00710 Asparaginase, N-terminal FORC54_0943 PF01343 Peptidase family S49 FORC54_0944 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FORC54_0944 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_0945 PF00881 Nitroreductase family FORC54_0946 PF01131 DNA topoisomerase FORC54_0946 PF01751 Toprim domain FORC54_0947 PF00850 Histone deacetylase domain FORC54_0948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_0948 PF00512 His Kinase A (phospho-acceptor) domain FORC54_0948 PF00072 Response regulator receiver domain FORC54_0948 PF09308 LuxQ, periplasmic FORC54_0949 PF00072 Response regulator receiver domain FORC54_0949 PF00990 Diguanylate cyclase, GGDEF domain FORC54_0950 PF13091 PLD-like domain FORC54_0951 PF04074 YhcH/YjgK/YiaL FORC54_0952 PF02386 Cation transport protein FORC54_0953 PF02080 TrkA-C domain FORC54_0953 PF02254 TrkA-N domain FORC54_0954 PF01048 Phosphorylase superfamily FORC54_0958 PF11893 Domain of unknown function (DUF3413) FORC54_0958 PF00884 Sulfatase FORC54_0959 PF07208 Protein of unknown function (DUF1414) FORC54_0960 PF04245 37-kD nucleoid-associated bacterial protein FORC54_0963 PF03553 Na+/H+ antiporter family FORC54_0964 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC54_0964 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC54_0966 PF00520 Ion transport protein FORC54_0966 PF00027 Cyclic nucleotide-binding domain FORC54_0967 PF01914 MarC family integral membrane protein FORC54_0968 PF00465 Iron-containing alcohol dehydrogenase FORC54_0968 PF00171 Aldehyde dehydrogenase family FORC54_0971 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FORC54_0971 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FORC54_0972 PF00462 Glutaredoxin FORC54_0974 PF03553 Na+/H+ antiporter family FORC54_0974 PF13726 Na+-H+ antiporter family FORC54_0975 PF00929 Exonuclease FORC54_0976 PF00691 OmpA family FORC54_0976 PF18393 MotY N-terminal domain FORC54_0977 PF10952 Protein of unknown function (DUF2753) FORC54_0978 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC54_0979 PF00633 Helix-hairpin-helix motif FORC54_0979 PF10576 Iron-sulfur binding domain of endonuclease III FORC54_0979 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC54_0980 PF02508 Rnf-Nqr subunit, membrane protein FORC54_0981 PF04205 FMN-binding domain FORC54_0982 PF03116 NQR2, RnfD, RnfE family FORC54_0984 PF13375 RnfC Barrel sandwich hybrid domain FORC54_0984 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FORC54_0984 PF12838 4Fe-4S dicluster domain FORC54_0984 PF10531 SLBB domain FORC54_0985 PF04060 Putative Fe-S cluster FORC54_0986 PF02508 Rnf-Nqr subunit, membrane protein FORC54_0988 PF12344 Ultra-violet resistance protein B FORC54_0988 PF04851 Type III restriction enzyme, res subunit FORC54_0988 PF02151 UvrB/uvrC motif FORC54_0988 PF17757 UvrB interaction domain FORC54_0988 PF00271 Helicase conserved C-terminal domain FORC54_0989 PF00158 Sigma-54 interaction domain FORC54_0989 PF02954 Bacterial regulatory protein, Fis family FORC54_0989 PF00072 Response regulator receiver domain FORC54_0990 PF01627 Hpt domain FORC54_0991 PF01933 Uncharacterised protein family UPF0052 FORC54_0992 PF06463 Molybdenum Cofactor Synthesis C FORC54_0992 PF04055 Radical SAM superfamily FORC54_0993 PF00994 Probable molybdopterin binding domain FORC54_0994 PF01967 MoaC family FORC54_0995 PF02597 ThiS family FORC54_0996 PF02391 MoaE protein FORC54_0998 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_0999 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1000 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1000 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_1001 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_1001 PF00005 ABC transporter FORC54_1002 PF00005 ABC transporter FORC54_1002 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_1003 PF13409 Glutathione S-transferase, N-terminal domain FORC54_1005 PF03795 YCII-related domain FORC54_1006 PF03061 Thioesterase superfamily FORC54_1007 PF04279 Intracellular septation protein A FORC54_1009 PF00375 Sodium:dicarboxylate symporter family FORC54_1010 PF00290 Tryptophan synthase alpha chain FORC54_1011 PF00291 Pyridoxal-phosphate dependent enzyme FORC54_1012 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FORC54_1012 PF00218 Indole-3-glycerol phosphate synthase FORC54_1013 PF02885 Glycosyl transferase family, helical bundle domain FORC54_1013 PF00591 Glycosyl transferase family, a/b domain FORC54_1014 PF00117 Glutamine amidotransferase class-I FORC54_1015 PF00425 chorismate binding enzyme FORC54_1015 PF04715 Anthranilate synthase component I, N terminal region FORC54_1016 PF02811 PHP domain FORC54_1017 PF01300 Telomere recombination FORC54_1019 PF00849 RNA pseudouridylate synthase FORC54_1019 PF01479 S4 domain FORC54_1020 PF04269 Protein of unknown function, DUF440 FORC54_1021 PF08207 Elongation factor P (EF-P) KOW-like domain FORC54_1021 PF01132 Elongation factor P (EF-P) OB domain FORC54_1021 PF09285 Elongation factor P, C-terminal FORC54_1023 PF08447 PAS fold FORC54_1023 PF00563 EAL domain FORC54_1023 PF08448 PAS fold FORC54_1023 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1024 PF00136 DNA polymerase family B FORC54_1024 PF03104 DNA polymerase family B, exonuclease domain FORC54_1025 PF00196 Bacterial regulatory proteins, luxR family FORC54_1025 PF00072 Response regulator receiver domain FORC54_1026 PF08459 UvrC Helix-hairpin-helix N-terminal FORC54_1026 PF02151 UvrB/uvrC motif FORC54_1026 PF01541 GIY-YIG catalytic domain FORC54_1027 PF01066 CDP-alcohol phosphatidyltransferase FORC54_1028 PF00202 Aminotransferase class-III FORC54_1029 PF03435 Saccharopine dehydrogenase NADP binding domain FORC54_1029 PF16653 Saccharopine dehydrogenase C-terminal domain FORC54_1033 PF00994 Probable molybdopterin binding domain FORC54_1033 PF02464 Competence-damaged protein FORC54_1035 PF00268 Ribonucleotide reductase, small chain FORC54_1036 PF03477 ATP cone domain FORC54_1036 PF02867 Ribonucleotide reductase, barrel domain FORC54_1036 PF00317 Ribonucleotide reductase, all-alpha domain FORC54_1039 PF00521 DNA gyrase/topoisomerase IV, subunit A FORC54_1039 PF03989 DNA gyrase C-terminal domain, beta-propeller FORC54_1042 PF02335 Cytochrome c552 FORC54_1044 PF13247 4Fe-4S dicluster domain FORC54_1045 PF03916 Polysulphide reductase, NrfD FORC54_1046 PF01578 Cytochrome C assembly protein FORC54_1046 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FORC54_1047 PF08534 Redoxin FORC54_1048 PF03918 Cytochrome C biogenesis protein FORC54_1051 PF09334 tRNA synthetases class I (M) FORC54_1051 PF01588 Putative tRNA binding domain FORC54_1052 PF10609 NUBPL iron-transfer P-loop NTPase FORC54_1053 PF00485 Phosphoribulokinase / Uridine kinase family FORC54_1055 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FORC54_1055 PF12557 Cob(I)alamin adenosyltransferase N terminal FORC54_1056 PF01451 Low molecular weight phosphotyrosine protein phosphatase FORC54_1057 PF01740 STAS domain FORC54_1057 PF00916 Sulfate permease family FORC54_1058 PF00575 S1 RNA binding domain FORC54_1058 PF12111 Polyribonucleotide phosphorylase C terminal FORC54_1058 PF10150 Ribonuclease E/G family FORC54_1059 PF00849 RNA pseudouridylate synthase FORC54_1059 PF01479 S4 domain FORC54_1060 PF02545 Maf-like protein FORC54_1061 PF02620 Large ribosomal RNA subunit accumulation protein YceD FORC54_1062 PF01783 Ribosomal L32p protein family FORC54_1063 PF02504 Fatty acid synthesis protein FORC54_1064 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FORC54_1064 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FORC54_1065 PF00698 Acyl transferase domain FORC54_1067 PF00550 Phosphopantetheine attachment site FORC54_1068 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC54_1068 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC54_1069 PF01063 Amino-transferase class IV FORC54_1070 PF02618 YceG-like family FORC54_1071 PF02223 Thymidylate kinase FORC54_1072 PF09115 DNA polymerase III, delta subunit, C terminal FORC54_1073 PF01026 TatD related DNase FORC54_1074 PF02378 Phosphotransferase system, EIIC FORC54_1074 PF00367 phosphotransferase system, EIIB FORC54_1076 PF00209 Sodium:neurotransmitter symporter family FORC54_1078 PF01734 Patatin-like phospholipase FORC54_1079 PF00224 Pyruvate kinase, barrel domain FORC54_1079 PF02887 Pyruvate kinase, alpha/beta domain FORC54_1080 PF00480 ROK family FORC54_1081 PF00072 Response regulator receiver domain FORC54_1081 PF01584 CheW-like domain FORC54_1082 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FORC54_1082 PF14579 Helix-hairpin-helix motif FORC54_1082 PF02811 PHP domain FORC54_1082 PF01336 OB-fold nucleic acid binding domain FORC54_1082 PF07733 Bacterial DNA polymerase III alpha NTPase domain FORC54_1085 PF00106 short chain dehydrogenase FORC54_1086 PF01343 Peptidase family S49 FORC54_1086 PF08496 Peptidase family S49 N-terminal FORC54_1087 PF02224 Cytidylate kinase FORC54_1088 PF00575 S1 RNA binding domain FORC54_1089 PF00216 Bacterial DNA-binding protein FORC54_1090 PF06305 Lipopolysaccharide assembly protein A domain FORC54_1091 PF18073 Rubredoxin metal binding domain FORC54_1092 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC54_1094 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1095 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1095 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_1096 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_1097 PF00005 ABC transporter FORC54_1097 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_1098 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_1098 PF00005 ABC transporter FORC54_1101 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FORC54_1103 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_1103 PF03466 LysR substrate binding domain FORC54_1105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FORC54_1105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FORC54_1106 PF01037 Lrp/AsnC ligand binding domain FORC54_1107 PF09397 Ftsk gamma domain FORC54_1107 PF17854 FtsK alpha domain FORC54_1107 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FORC54_1107 PF01580 FtsK/SpoIIIE family FORC54_1108 PF03548 Outer membrane lipoprotein carrier protein LolA FORC54_1109 PF12002 MgsA AAA+ ATPase C terminal FORC54_1109 PF16193 AAA C-terminal domain FORC54_1109 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_1110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC54_1110 PF02403 Seryl-tRNA synthetase N-terminal domain FORC54_1112 PF04055 Radical SAM superfamily FORC54_1112 PF06968 Biotin and Thiamin Synthesis associated domain FORC54_1113 PF00155 Aminotransferase class I and II FORC54_1114 PF08241 Methyltransferase domain FORC54_1117 PF01435 Peptidase family M48 FORC54_1126 PF08328 Adenylosuccinate lyase C-terminal FORC54_1126 PF00206 Lyase FORC54_1127 PF04356 Protein of unknown function (DUF489) FORC54_1130 PF00294 pfkB family carbohydrate kinase FORC54_1131 PF00816 H-NS histone family FORC54_1132 PF03553 Na+/H+ antiporter family FORC54_1133 PF01634 ATP phosphoribosyltransferase FORC54_1133 PF08029 HisG, C-terminal domain FORC54_1134 PF00815 Histidinol dehydrogenase FORC54_1135 PF00155 Aminotransferase class I and II FORC54_1136 PF00475 Imidazoleglycerol-phosphate dehydratase FORC54_1136 PF08645 Polynucleotide kinase 3 phosphatase FORC54_1137 PF00117 Glutamine amidotransferase class-I FORC54_1138 PF00977 Histidine biosynthesis protein FORC54_1139 PF00977 Histidine biosynthesis protein FORC54_1140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FORC54_1140 PF01502 Phosphoribosyl-AMP cyclohydrolase FORC54_1141 PF02810 SEC-C motif FORC54_1142 PF00563 EAL domain FORC54_1142 PF08668 HDOD domain FORC54_1143 PF00149 Calcineurin-like phosphoesterase FORC54_1144 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FORC54_1145 PF09190 DALR domain FORC54_1145 PF01406 tRNA synthetases class I (C) catalytic domain FORC54_1146 PF00265 Thymidine kinase FORC54_1148 PF01370 NAD dependent epimerase/dehydratase family FORC54_1149 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_1149 PF03466 LysR substrate binding domain FORC54_1153 PF13006 Insertion element 4 transposase N-terminal FORC54_1153 PF01609 Transposase DDE domain FORC54_1154 PF01226 Formate/nitrite transporter FORC54_1155 PF03649 Uncharacterised protein family (UPF0014) FORC54_1156 PF06796 Periplasmic nitrate reductase protein NapE FORC54_1157 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC54_1158 PF00384 Molybdopterin oxidoreductase FORC54_1158 PF18364 Molybdopterin oxidoreductase N-terminal domain FORC54_1158 PF01568 Molydopterin dinucleotide binding domain FORC54_1162 PF16874 Glycosyl hydrolase family 36 C-terminal domain FORC54_1162 PF16875 Glycosyl hydrolase family 36 N-terminal domain FORC54_1164 PF01368 DHH family FORC54_1164 PF02833 DHHA2 domain FORC54_1167 PF00005 ABC transporter FORC54_1168 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_1168 PF00005 ABC transporter FORC54_1169 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_1169 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1170 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1171 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_1172 PF00158 Sigma-54 interaction domain FORC54_1172 PF02954 Bacterial regulatory protein, Fis family FORC54_1173 PF04012 PspA/IM30 family FORC54_1174 PF06667 Phage shock protein B FORC54_1175 PF04024 PspC domain FORC54_1177 PF13533 Biotin-lipoyl like FORC54_1178 PF00873 AcrB/AcrD/AcrF family FORC54_1179 PF03352 Methyladenine glycosylase FORC54_1180 PF01053 Cys/Met metabolism PLP-dependent enzyme FORC54_1181 PF13091 PLD-like domain FORC54_1181 PF13396 Phospholipase_D-nuclease N-terminal FORC54_1182 PF00209 Sodium:neurotransmitter symporter family FORC54_1183 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1183 PF00672 HAMP domain FORC54_1183 PF12729 Four helix bundle sensory module for signal transduction FORC54_1184 PF00849 RNA pseudouridylate synthase FORC54_1186 PF00175 Oxidoreductase NAD-binding domain FORC54_1186 PF00970 Oxidoreductase FAD-binding domain FORC54_1186 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_1187 PF03063 Prismane/CO dehydrogenase family FORC54_1188 PF01590 GAF domain FORC54_1188 PF00158 Sigma-54 interaction domain FORC54_1189 PF01066 CDP-alcohol phosphatidyltransferase FORC54_1190 PF00005 ABC transporter FORC54_1191 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1192 PF13416 Bacterial extracellular solute-binding protein FORC54_1194 PF06945 Protein of unknown function (DUF1289) FORC54_1196 PF00665 Integrase core domain FORC54_1197 PF01548 Transposase FORC54_1197 PF02371 Transposase IS116/IS110/IS902 family FORC54_1198 PF01527 Transposase FORC54_1200 PF03707 Bacterial signalling protein N terminal repeat FORC54_1200 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1200 PF00563 EAL domain FORC54_1203 PF01386 Ribosomal L25p family FORC54_1204 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1204 PF00672 HAMP domain FORC54_1205 PF00072 Response regulator receiver domain FORC54_1205 PF00486 Transcriptional regulatory protein, C terminal FORC54_1207 PF04851 Type III restriction enzyme, res subunit FORC54_1207 PF00271 Helicase conserved C-terminal domain FORC54_1208 PF00849 RNA pseudouridylate synthase FORC54_1208 PF01479 S4 domain FORC54_1209 PF07690 Major Facilitator Superfamily FORC54_1211 PF13460 NAD(P)H-binding FORC54_1211 PF11066 Protein of unknown function (DUF2867) FORC54_1212 PF00005 ABC transporter FORC54_1215 PF06965 Na+/H+ antiporter 1 FORC54_1217 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FORC54_1217 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FORC54_1217 PF02770 Acyl-CoA dehydrogenase, middle domain FORC54_1217 PF09317 Domain of unknown function (DUF1974) FORC54_1218 PF07055 Enoyl reductase FAD binding domain FORC54_1218 PF12241 Trans-2-enoyl-CoA reductase catalytic region FORC54_1218 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FORC54_1219 PF06826 Predicted Permease Membrane Region FORC54_1219 PF02080 TrkA-C domain FORC54_1220 PF00462 Glutaredoxin FORC54_1221 PF00465 Iron-containing alcohol dehydrogenase FORC54_1222 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_1223 PF01418 Helix-turn-helix domain, rpiR family FORC54_1223 PF01380 SIS domain FORC54_1224 PF00282 Pyridoxal-dependent decarboxylase conserved domain FORC54_1226 PF03956 Lysine exporter LysO FORC54_1228 PF04994 TfoX C-terminal domain FORC54_1228 PF04993 TfoX N-terminal domain FORC54_1231 PF13188 PAS domain FORC54_1231 PF13188 PAS domain FORC54_1231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1231 PF13426 PAS domain FORC54_1231 PF13426 PAS domain FORC54_1231 PF00989 PAS fold FORC54_1231 PF00989 PAS fold FORC54_1231 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1231 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1231 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1233 PF00266 Aminotransferase class-V FORC54_1234 PF00664 ABC transporter transmembrane region FORC54_1234 PF00005 ABC transporter FORC54_1235 PF00664 ABC transporter transmembrane region FORC54_1235 PF00005 ABC transporter FORC54_1236 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_1238 PF00266 Aminotransferase class-V FORC54_1240 PF00072 Response regulator receiver domain FORC54_1240 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1241 PF00939 Sodium:sulfate symporter transmembrane region FORC54_1242 PF02698 DUF218 domain FORC54_1243 PF03949 Malic enzyme, NAD binding domain FORC54_1243 PF00390 Malic enzyme, N-terminal domain FORC54_1244 PF00271 Helicase conserved C-terminal domain FORC54_1244 PF04408 Helicase associated domain (HA2) FORC54_1244 PF00270 DEAD/DEAH box helicase FORC54_1244 PF08482 ATP-dependent helicase C-terminal FORC54_1245 PF02253 Phospholipase A1 FORC54_1247 PF01259 SAICAR synthetase FORC54_1249 PF04172 LrgB-like family FORC54_1250 PF03788 LrgA family FORC54_1251 PF08411 Exonuclease C-terminal FORC54_1251 PF00929 Exonuclease FORC54_1254 PF02277 Phosphoribosyltransferase FORC54_1255 PF02654 Cobalamin-5-phosphate synthase FORC54_1256 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FORC54_1259 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FORC54_1260 PF01032 FecCD transport family FORC54_1261 PF00005 ABC transporter FORC54_1264 PF07690 Major Facilitator Superfamily FORC54_1265 PF03466 LysR substrate binding domain FORC54_1265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_1267 PF05971 RNA methyltransferase FORC54_1270 PF04204 Homoserine O-succinyltransferase FORC54_1271 PF00149 Calcineurin-like phosphoesterase FORC54_1271 PF02872 5'-nucleotidase, C-terminal domain FORC54_1272 PF01546 Peptidase family M20/M25/M40 FORC54_1272 PF07687 Peptidase dimerisation domain FORC54_1273 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC54_1274 PF04209 homogentisate 1,2-dioxygenase FORC54_1276 PF02798 Glutathione S-transferase, N-terminal domain FORC54_1276 PF14497 Glutathione S-transferase, C-terminal domain FORC54_1281 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1281 PF17151 Periplasmic sensor domain FORC54_1282 PF00313 'Cold-shock' DNA-binding domain FORC54_1284 PF00141 Peroxidase FORC54_1285 PF03009 Glycerophosphoryl diester phosphodiesterase family FORC54_1286 PF08220 DeoR-like helix-turn-helix domain FORC54_1286 PF00455 DeoR C terminal sensor domain FORC54_1287 PF00005 ABC transporter FORC54_1287 PF17912 MalK OB fold domain FORC54_1288 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1289 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1290 PF13416 Bacterial extracellular solute-binding protein FORC54_1291 PF02743 Cache domain FORC54_1291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1291 PF00672 HAMP domain FORC54_1292 PF01925 Sulfite exporter TauE/SafE FORC54_1293 PF00072 Response regulator receiver domain FORC54_1293 PF00196 Bacterial regulatory proteins, luxR family FORC54_1298 PF01970 Tripartite tricarboxylate transporter TctA family FORC54_1304 PF00285 Citrate synthase, C-terminal domain FORC54_1305 PF00330 Aconitase family (aconitate hydratase) FORC54_1305 PF00694 Aconitase C-terminal domain FORC54_1306 PF04303 PrpF protein FORC54_1307 PF00501 AMP-binding enzyme FORC54_1307 PF16177 Acetyl-coenzyme A synthetase N-terminus FORC54_1307 PF13193 AMP-binding enzyme C-terminal domain FORC54_1309 PF00089 Trypsin FORC54_1311 PF02743 Cache domain FORC54_1311 PF00672 HAMP domain FORC54_1311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1313 PF04055 Radical SAM superfamily FORC54_1314 PF06508 Queuosine biosynthesis protein QueC FORC54_1315 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1315 PF17151 Periplasmic sensor domain FORC54_1320 PF10672 S-adenosylmethionine-dependent methyltransferase FORC54_1320 PF17785 PUA-like domain FORC54_1321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1321 PF00672 HAMP domain FORC54_1321 PF02743 Cache domain FORC54_1322 PF00708 Acylphosphatase FORC54_1323 PF04358 DsrC like protein FORC54_1324 PF01027 Inhibitor of apoptosis-promoting Bax1 FORC54_1325 PF00005 ABC transporter FORC54_1326 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1327 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1328 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_1329 PF14824 Sirohaem biosynthesis protein central FORC54_1329 PF10414 Sirohaem synthase dimerisation region FORC54_1329 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC54_1330 PF12800 4Fe-4S binding domain FORC54_1330 PF12838 4Fe-4S dicluster domain FORC54_1331 PF13237 4Fe-4S dicluster domain FORC54_1331 PF12801 4Fe-4S binding domain FORC54_1332 PF01553 Acyltransferase FORC54_1334 PF02423 Ornithine cyclodeaminase/mu-crystallin family FORC54_1336 PF01266 FAD dependent oxidoreductase FORC54_1336 PF01571 Aminomethyltransferase folate-binding domain FORC54_1336 PF08669 Glycine cleavage T-protein C-terminal barrel domain FORC54_1336 PF16350 FAD dependent oxidoreductase central domain FORC54_1337 PF00582 Universal stress protein family FORC54_1338 PF03401 Tripartite tricarboxylate transporter family receptor FORC54_1341 PF00171 Aldehyde dehydrogenase family FORC54_1343 PF01613 Flavin reductase like domain FORC54_1344 PF01047 MarR family FORC54_1345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC54_1348 PF01557 Fumarylacetoacetate (FAA) hydrolase family FORC54_1349 PF03328 HpcH/HpaI aldolase/citrate lyase family FORC54_1350 PF01557 Fumarylacetoacetate (FAA) hydrolase family FORC54_1351 PF01557 Fumarylacetoacetate (FAA) hydrolase family FORC54_1352 PF00171 Aldehyde dehydrogenase family FORC54_1355 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FORC54_1356 PF00171 Aldehyde dehydrogenase family FORC54_1358 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FORC54_1359 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FORC54_1360 PF01810 LysE type translocator FORC54_1362 PF01235 Sodium:alanine symporter family FORC54_1369 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_1372 PF00989 PAS fold FORC54_1372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1372 PF17203 Single cache domain 3 FORC54_1372 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FORC54_1373 PF00072 Response regulator receiver domain FORC54_1373 PF12431 Transcriptional regulator FORC54_1374 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FORC54_1374 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FORC54_1375 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FORC54_1376 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FORC54_1376 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FORC54_1383 PF02397 Bacterial sugar transferase FORC54_1385 PF00534 Glycosyl transferases group 1 FORC54_1385 PF13439 Glycosyltransferase Family 4 FORC54_1392 PF00534 Glycosyl transferases group 1 FORC54_1392 PF13439 Glycosyltransferase Family 4 FORC54_1394 PF00158 Sigma-54 interaction domain FORC54_1394 PF00072 Response regulator receiver domain FORC54_1394 PF02954 Bacterial regulatory protein, Fis family FORC54_1395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1395 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1395 PF00072 Response regulator receiver domain FORC54_1395 PF01627 Hpt domain FORC54_1395 PF17149 Periplasmic sensor domain found in signal transduction proteins FORC54_1395 PF00672 HAMP domain FORC54_1398 PF02563 Polysaccharide biosynthesis/export protein FORC54_1398 PF10531 SLBB domain FORC54_1400 PF01740 STAS domain FORC54_1401 PF01068 ATP dependent DNA ligase domain FORC54_1401 PF14743 DNA ligase OB-like domain FORC54_1402 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1402 PF17158 Membrane-associated sensor, integral membrane domain FORC54_1403 PF04461 Protein of unknown function (DUF520) FORC54_1404 PF00793 DAHP synthetase I family FORC54_1407 PF17783 CvfB-like winged helix domain FORC54_1407 PF13509 S1 domain FORC54_1408 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FORC54_1408 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FORC54_1408 PF01189 16S rRNA methyltransferase RsmB/F FORC54_1409 PF02470 MlaD protein FORC54_1410 PF04403 Paraquat-inducible protein A FORC54_1411 PF00664 ABC transporter transmembrane region FORC54_1411 PF00005 ABC transporter FORC54_1412 PF13185 GAF domain FORC54_1413 PF04352 ProQ/FINO family FORC54_1413 PF17516 ProQ C-terminal domain FORC54_1414 PF03572 Peptidase family S41 FORC54_1414 PF00595 PDZ domain FORC54_1414 PF11818 C-terminal domain of tail specific protease (DUF3340) FORC54_1414 PF17804 Tail specific protease N-terminal domain FORC54_1416 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FORC54_1416 PF01433 Peptidase family M1 domain FORC54_1416 PF11940 Domain of unknown function (DUF3458) Ig-like fold FORC54_1417 PF05088 Bacterial NAD-glutamate dehydrogenase FORC54_1418 PF01180 Dihydroorotate dehydrogenase FORC54_1419 PF07126 Cell-division protein ZapC FORC54_1420 PF02926 THUMP domain FORC54_1420 PF10672 S-adenosylmethionine-dependent methyltransferase FORC54_1420 PF01170 Putative RNA methylase family UPF0020 FORC54_1422 PF00005 ABC transporter FORC54_1422 PF16326 ABC transporter C-terminal domain FORC54_1422 PF12848 ABC transporter FORC54_1424 PF04957 Ribosome modulation factor FORC54_1425 PF07977 FabA-like domain FORC54_1426 PF13654 AAA domain FORC54_1426 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC54_1427 PF17414 MatP C-terminal ribbon-helix-helix domain FORC54_1427 PF06303 MatP N-terminal domain FORC54_1433 PF01381 Helix-turn-helix FORC54_1438 PF01381 Helix-turn-helix FORC54_1443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1443 PF09308 LuxQ, periplasmic FORC54_1443 PF00072 Response regulator receiver domain FORC54_1443 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1446 PF00115 Cytochrome C and Quinol oxidase polypeptide I FORC54_1449 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FORC54_1449 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FORC54_1451 PF00403 Heavy-metal-associated domain FORC54_1454 PF00027 Cyclic nucleotide-binding domain FORC54_1454 PF13545 Crp-like helix-turn-helix domain FORC54_1455 PF00582 Universal stress protein family FORC54_1456 PF01171 PP-loop family FORC54_1458 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FORC54_1460 PF00005 ABC transporter FORC54_1460 PF08402 TOBE domain FORC54_1461 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1462 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1463 PF13416 Bacterial extracellular solute-binding protein FORC54_1464 PF13416 Bacterial extracellular solute-binding protein FORC54_1465 PF02146 Sir2 family FORC54_1466 PF00909 Ammonium Transporter Family FORC54_1471 PF13247 4Fe-4S dicluster domain FORC54_1472 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC54_1472 PF01568 Molydopterin dinucleotide binding domain FORC54_1472 PF00384 Molybdopterin oxidoreductase FORC54_1478 PF02634 FdhD/NarQ family FORC54_1479 PF00672 HAMP domain FORC54_1479 PF02743 Cache domain FORC54_1479 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1480 PF12848 ABC transporter FORC54_1480 PF00005 ABC transporter FORC54_1483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1483 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1483 PF00989 PAS fold FORC54_1484 PF02954 Bacterial regulatory protein, Fis family FORC54_1484 PF00158 Sigma-54 interaction domain FORC54_1484 PF00072 Response regulator receiver domain FORC54_1485 PF12849 PBP superfamily domain FORC54_1486 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_1487 PF00005 ABC transporter FORC54_1487 PF08402 TOBE domain FORC54_1488 PF12804 MobA-like NTP transferase domain FORC54_1489 PF00994 Probable molybdopterin binding domain FORC54_1489 PF03453 MoeA N-terminal region (domain I and II) FORC54_1489 PF03454 MoeA C-terminal region (domain IV) FORC54_1491 PF00480 ROK family FORC54_1494 PF00672 HAMP domain FORC54_1494 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1494 PF02743 Cache domain FORC54_1495 PF00877 NlpC/P60 family FORC54_1497 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1497 PF05230 MASE2 domain FORC54_1498 PF00072 Response regulator receiver domain FORC54_1498 PF01339 CheB methylesterase FORC54_1501 PF00677 Lumazine binding domain FORC54_1502 PF01554 MatE FORC54_1509 PF13737 Transposase DDE domain FORC54_1510 PF00665 Integrase core domain FORC54_1511 PF02371 Transposase IS116/IS110/IS902 family FORC54_1511 PF01548 Transposase FORC54_1512 PF01527 Transposase FORC54_1513 PF08378 Nuclease-related domain FORC54_1520 PF13333 Integrase core domain FORC54_1520 PF00665 Integrase core domain FORC54_1520 PF13276 HTH-like domain FORC54_1525 PF07859 alpha/beta hydrolase fold FORC54_1529 PF02048 Heat-stable enterotoxin ST FORC54_1552 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FORC54_1562 PF00665 Integrase core domain FORC54_1563 PF02371 Transposase IS116/IS110/IS902 family FORC54_1563 PF01548 Transposase FORC54_1564 PF01527 Transposase FORC54_1583 PF00583 Acetyltransferase (GNAT) family FORC54_1587 PF04229 GrpB protein FORC54_1587 PF13673 Acetyltransferase (GNAT) domain FORC54_1589 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FORC54_1590 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FORC54_1593 PF09905 DNA-binding protein VF530 FORC54_1600 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FORC54_1601 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FORC54_1603 PF01527 Transposase FORC54_1604 PF01548 Transposase FORC54_1604 PF02371 Transposase IS116/IS110/IS902 family FORC54_1605 PF00665 Integrase core domain FORC54_1618 PF03992 Antibiotic biosynthesis monooxygenase FORC54_1633 PF02567 Phenazine biosynthesis-like protein FORC54_1640 PF00665 Integrase core domain FORC54_1641 PF01527 Transposase FORC54_1672 PF13302 Acetyltransferase (GNAT) domain FORC54_1698 PF01527 Transposase FORC54_1699 PF00665 Integrase core domain FORC54_1703 PF13302 Acetyltransferase (GNAT) domain FORC54_1705 PF13302 Acetyltransferase (GNAT) domain FORC54_1733 PF09905 DNA-binding protein VF530 FORC54_1755 PF09905 DNA-binding protein VF530 FORC54_1757 PF02463 RecF/RecN/SMC N terminal domain FORC54_1768 PF00589 Phage integrase family FORC54_1768 PF13495 Phage integrase, N-terminal SAM-like domain FORC54_1769 PF00453 Ribosomal protein L20 FORC54_1770 PF01632 Ribosomal protein L35 FORC54_1771 PF05198 Translation initiation factor IF-3, N-terminal domain FORC54_1771 PF00707 Translation initiation factor IF-3, C-terminal domain FORC54_1772 PF02824 TGS domain FORC54_1772 PF03129 Anticodon binding domain FORC54_1772 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FORC54_1772 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC54_1774 PF07070 SpoOM protein FORC54_1775 PF00392 Bacterial regulatory proteins, gntR family FORC54_1775 PF07702 UTRA domain FORC54_1776 PF01979 Amidohydrolase family FORC54_1777 PF00491 Arginase family FORC54_1778 PF17391 Urocanase N-terminal domain FORC54_1778 PF01175 Urocanase Rossmann-like domain FORC54_1778 PF17392 Urocanase C-terminal domain FORC54_1779 PF00221 Aromatic amino acid lyase FORC54_1781 PF00089 Trypsin FORC54_1783 PF13183 4Fe-4S dicluster domain FORC54_1783 PF01565 FAD binding domain FORC54_1783 PF02913 FAD linked oxidases, C-terminal domain FORC54_1786 PF13488 Glycine zipper FORC54_1786 PF00691 OmpA family FORC54_1789 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC54_1789 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FORC54_1790 PF02222 ATP-grasp domain FORC54_1791 PF05724 Thiopurine S-methyltransferase (TPMT) FORC54_1793 PF00216 Bacterial DNA-binding protein FORC54_1796 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FORC54_1796 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FORC54_1797 PF02281 Transposase Tn5 dimerisation domain FORC54_1797 PF01609 Transposase DDE domain FORC54_1797 PF14706 Transposase DNA-binding FORC54_1798 PF03147 Ferredoxin-fold anticodon binding domain FORC54_1798 PF03483 B3/4 domain FORC54_1798 PF03484 tRNA synthetase B5 domain FORC54_1798 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FORC54_1798 PF01588 Putative tRNA binding domain FORC54_1799 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FORC54_1799 PF01409 tRNA synthetases class II core domain (F) FORC54_1800 PF00072 Response regulator receiver domain FORC54_1800 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1812 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FORC54_1812 PF17810 Arginine decarboxylase helical bundle domain FORC54_1812 PF17944 Arginine decarboxylase C-terminal helical extension FORC54_1813 PF00491 Arginase family FORC54_1814 PF07690 Major Facilitator Superfamily FORC54_1815 PF03280 Proteobacterial lipase chaperone protein FORC54_1816 PF00561 alpha/beta hydrolase fold FORC54_1821 PF11898 Domain of unknown function (DUF3418) FORC54_1821 PF00270 DEAD/DEAH box helicase FORC54_1821 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FORC54_1821 PF04408 Helicase associated domain (HA2) FORC54_1821 PF00271 Helicase conserved C-terminal domain FORC54_1823 PF02525 Flavodoxin-like fold FORC54_1830 PF00437 Type II/IV secretion system protein FORC54_1831 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FORC54_1833 PF04972 BON domain FORC54_1833 PF00263 Bacterial type II and III secretion system protein FORC54_1833 PF13629 Pilus formation protein N terminal region FORC54_1844 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1846 PF00012 Hsp70 protein FORC54_1847 PF00012 Hsp70 protein FORC54_1854 PF03707 Bacterial signalling protein N terminal repeat FORC54_1854 PF00563 EAL domain FORC54_1854 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1859 PF13439 Glycosyltransferase Family 4 FORC54_1859 PF00534 Glycosyl transferases group 1 FORC54_1860 PF13439 Glycosyltransferase Family 4 FORC54_1860 PF00534 Glycosyl transferases group 1 FORC54_1865 PF02563 Polysaccharide biosynthesis/export protein FORC54_1865 PF10531 SLBB domain FORC54_1865 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FORC54_1867 PF02397 Bacterial sugar transferase FORC54_1868 PF01235 Sodium:alanine symporter family FORC54_1869 PF00005 ABC transporter FORC54_1869 PF00664 ABC transporter transmembrane region FORC54_1870 PF00005 ABC transporter FORC54_1870 PF00664 ABC transporter transmembrane region FORC54_1873 PF00210 Ferritin-like domain FORC54_1874 PF00072 Response regulator receiver domain FORC54_1875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC54_1876 PF03222 Tryptophan/tyrosine permease family FORC54_1877 PF00781 Diacylglycerol kinase catalytic domain FORC54_1879 PF01734 Patatin-like phospholipase FORC54_1880 PF01966 HD domain FORC54_1883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_1883 PF03466 LysR substrate binding domain FORC54_1884 PF04055 Radical SAM superfamily FORC54_1885 PF11230 Protein of unknown function (DUF3029) FORC54_1886 PF03707 Bacterial signalling protein N terminal repeat FORC54_1886 PF13188 PAS domain FORC54_1886 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1886 PF00563 EAL domain FORC54_1887 PF11871 Domain of unknown function (DUF3391) FORC54_1887 PF01966 HD domain FORC54_1889 PF05231 MASE1 FORC54_1889 PF00563 EAL domain FORC54_1890 PF17158 Membrane-associated sensor, integral membrane domain FORC54_1890 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1892 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1892 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_1892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1893 PF00939 Sodium:sulfate symporter transmembrane region FORC54_1896 PF13302 Acetyltransferase (GNAT) domain FORC54_1897 PF13188 PAS domain FORC54_1897 PF18024 Helix-turn-helix domain FORC54_1897 PF00158 Sigma-54 interaction domain FORC54_1898 PF05128 Domain of unknown function (DUF697) FORC54_1899 PF04317 YcjX-like family, DUF463 FORC54_1902 PF00425 chorismate binding enzyme FORC54_1902 PF04715 Anthranilate synthase component I, N terminal region FORC54_1903 PF09308 LuxQ, periplasmic FORC54_1903 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1903 PF00072 Response regulator receiver domain FORC54_1905 PF00293 NUDIX domain FORC54_1906 PF03222 Tryptophan/tyrosine permease family FORC54_1907 PF03315 Serine dehydratase beta chain FORC54_1907 PF03313 Serine dehydratase alpha chain FORC54_1908 PF00563 EAL domain FORC54_1908 PF04940 Sensors of blue-light using FAD FORC54_1910 PF01242 6-pyruvoyl tetrahydropterin synthase FORC54_1911 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1911 PF00672 HAMP domain FORC54_1912 PF01336 OB-fold nucleic acid binding domain FORC54_1912 PF00152 tRNA synthetases class II (D, K and N) FORC54_1915 PF00672 HAMP domain FORC54_1915 PF01966 HD domain FORC54_1916 PF00155 Aminotransferase class I and II FORC54_1920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1920 PF00672 HAMP domain FORC54_1920 PF02743 Cache domain FORC54_1921 PF02028 BCCT, betaine/carnitine/choline family transporter FORC54_1922 PF01047 MarR family FORC54_1923 PF00072 Response regulator receiver domain FORC54_1923 PF00196 Bacterial regulatory proteins, luxR family FORC54_1924 PF17200 Single Cache domain 2 FORC54_1924 PF07730 Histidine kinase FORC54_1925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC54_1927 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC54_1930 PF00753 Metallo-beta-lactamase superfamily FORC54_1931 PF05951 Bacterial protein of unknown function (DUF882) FORC54_1932 PF01471 Putative peptidoglycan binding domain FORC54_1932 PF03734 L,D-transpeptidase catalytic domain FORC54_1937 PF00925 GTP cyclohydrolase II FORC54_1938 PF00392 Bacterial regulatory proteins, gntR family FORC54_1938 PF07840 FadR C-terminal domain FORC54_1939 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FORC54_1940 PF02600 Disulfide bond formation protein DsbB FORC54_1941 PF07516 SecA Wing and Scaffold domain FORC54_1941 PF02810 SEC-C motif FORC54_1941 PF07517 SecA DEAD-like domain FORC54_1941 PF01043 SecA preprotein cross-linking domain FORC54_1942 PF01207 Dihydrouridine synthase (Dus) FORC54_1943 PF00072 Response regulator receiver domain FORC54_1943 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1944 PF00128 Alpha amylase, catalytic domain FORC54_1944 PF02903 Alpha amylase, N-terminal ig-like domain FORC54_1945 PF00005 ABC transporter FORC54_1946 PF02653 Branched-chain amino acid transport system / permease component FORC54_1948 PF04217 Protein of unknown function, DUF412 FORC54_1949 PF00871 Acetokinase family FORC54_1950 PF01515 Phosphate acetyl/butaryl transferase FORC54_1950 PF07085 DRTGG domain FORC54_1951 PF01717 Cobalamin-independent synthase, Catalytic domain FORC54_1951 PF08267 Cobalamin-independent synthase, N-terminal domain FORC54_1952 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_1952 PF03466 LysR substrate binding domain FORC54_1955 PF03707 Bacterial signalling protein N terminal repeat FORC54_1955 PF00563 EAL domain FORC54_1955 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1956 PF03707 Bacterial signalling protein N terminal repeat FORC54_1956 PF00563 EAL domain FORC54_1956 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1957 PF08497 Radical SAM N-terminal FORC54_1957 PF04055 Radical SAM superfamily FORC54_1957 PF11842 Domain of unknown function (DUF3362) FORC54_1958 PF00990 Diguanylate cyclase, GGDEF domain FORC54_1958 PF03707 Bacterial signalling protein N terminal repeat FORC54_1958 PF00563 EAL domain FORC54_1960 PF01740 STAS domain FORC54_1960 PF00916 Sulfate permease family FORC54_1961 PF12833 Helix-turn-helix domain FORC54_1961 PF02311 AraC-like ligand binding domain FORC54_1966 PF03741 Integral membrane protein TerC family FORC54_1967 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_1967 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_1968 PF02743 Cache domain FORC54_1968 PF00672 HAMP domain FORC54_1968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_1969 PF13419 Haloacid dehalogenase-like hydrolase FORC54_1972 PF04229 GrpB protein FORC54_1986 PF04471 Restriction endonuclease FORC54_1986 PF14338 Mrr N-terminal domain FORC54_1990 PF06610 L-alanine exporter FORC54_1991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_1991 PF00512 His Kinase A (phospho-acceptor) domain FORC54_1991 PF09308 LuxQ, periplasmic FORC54_1991 PF00072 Response regulator receiver domain FORC54_1994 PF03738 Glutathionylspermidine synthase preATP-grasp FORC54_1996 PF03994 Domain of Unknown Function (DUF350) FORC54_1998 PF02445 Quinolinate synthetase A protein FORC54_1999 PF16331 TolA binding protein trimerisation FORC54_1999 PF13174 Tetratricopeptide repeat FORC54_2000 PF00691 OmpA family FORC54_2001 PF04052 TolB amino-terminal domain FORC54_2001 PF07676 WD40-like Beta Propeller Repeat FORC54_2003 PF02472 Biopolymer transport protein ExbD/TolR FORC54_2004 PF01618 MotA/TolQ/ExbB proton channel family FORC54_2005 PF03061 Thioesterase superfamily FORC54_2007 PF08173 Membrane bound YbgT-like protein FORC54_2008 PF02322 Cytochrome bd terminal oxidase subunit II FORC54_2009 PF01654 Cytochrome bd terminal oxidase subunit I FORC54_2010 PF05496 Holliday junction DNA helicase RuvB P-loop domain FORC54_2010 PF05491 RuvB C-terminal winged helix domain FORC54_2010 PF17864 RuvB AAA lid domain FORC54_2011 PF07499 RuvA, C-terminal domain FORC54_2011 PF01330 RuvA N terminal domain FORC54_2012 PF02075 Crossover junction endodeoxyribonuclease RuvC FORC54_2013 PF01336 OB-fold nucleic acid binding domain FORC54_2013 PF02938 GAD domain FORC54_2013 PF00152 tRNA synthetases class II (D, K and N) FORC54_2015 PF13649 Methyltransferase domain FORC54_2016 PF08003 Protein of unknown function (DUF1698) FORC54_2017 PF18030 RimK PreATP-grasp domain FORC54_2017 PF08443 RimK-like ATP-grasp domain FORC54_2020 PF04310 MukB N-terminal FORC54_2020 PF16330 MukB hinge domain FORC54_2021 PF04288 MukE-like family FORC54_2022 PF17192 MukF middle domain FORC54_2022 PF17193 MukF C-terminal domain FORC54_2022 PF03882 MukF winged-helix domain FORC54_2024 PF02698 DUF218 domain FORC54_2025 PF00072 Response regulator receiver domain FORC54_2025 PF00486 Transcriptional regulatory protein, C terminal FORC54_2026 PF02613 Nitrate reductase delta subunit FORC54_2027 PF00356 Bacterial regulatory proteins, lacI family FORC54_2028 PF04993 TfoX N-terminal domain FORC54_2028 PF04994 TfoX C-terminal domain FORC54_2031 PF00561 alpha/beta hydrolase fold FORC54_2032 PF00534 Glycosyl transferases group 1 FORC54_2032 PF08323 Starch synthase catalytic domain FORC54_2033 PF00483 Nucleotidyl transferase FORC54_2035 PF01396 Topoisomerase DNA binding C4 zinc finger FORC54_2035 PF08272 Topoisomerase I zinc-ribbon-like FORC54_2035 PF01131 DNA topoisomerase FORC54_2035 PF01751 Toprim domain FORC54_2036 PF10692 Protein of unknown function (DUF2498) FORC54_2037 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FORC54_2039 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FORC54_2040 PF04376 Arginine-tRNA-protein transferase, N terminus FORC54_2040 PF04377 Arginine-tRNA-protein transferase, C terminus FORC54_2041 PF01176 Translation initiation factor 1A / IF-1 FORC54_2042 PF02861 Clp amino terminal domain, pathogenicity island component FORC54_2042 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_2042 PF07724 AAA domain (Cdc48 subfamily) FORC54_2042 PF17871 AAA lid domain FORC54_2042 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_2043 PF02617 ATP-dependent Clp protease adaptor protein ClpS FORC54_2044 PF00313 'Cold-shock' DNA-binding domain FORC54_2045 PF03971 Monomeric isocitrate dehydrogenase FORC54_2046 PF00849 RNA pseudouridylate synthase FORC54_2047 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC54_2048 PF13609 Gram-negative porin FORC54_2049 PF13307 Helicase C-terminal domain FORC54_2049 PF06733 DEAD_2 FORC54_2050 PF01925 Sulfite exporter TauE/SafE FORC54_2051 PF07445 Primosomal replication protein priC FORC54_2052 PF10689 Protein of unknown function (DUF2496) FORC54_2053 PF02743 Cache domain FORC54_2053 PF00672 HAMP domain FORC54_2053 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2054 PF03372 Endonuclease/Exonuclease/phosphatase family FORC54_2056 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2057 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2058 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_2059 PF00005 ABC transporter FORC54_2062 PF01228 Glycine radical FORC54_2062 PF02901 Pyruvate formate lyase-like FORC54_2064 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2064 PF00672 HAMP domain FORC54_2065 PF04055 Radical SAM superfamily FORC54_2067 PF03887 YfbU domain FORC54_2068 PF08298 PrkA AAA domain FORC54_2068 PF06798 PrkA serine protein kinase C-terminal domain FORC54_2069 PF04285 Protein of unknown function (DUF444) FORC54_2070 PF04293 SpoVR like protein FORC54_2071 PF17155 Gammaproteobacterial periplasmic sensor domain FORC54_2071 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2072 PF02348 Cytidylyltransferase FORC54_2073 PF03966 Trm112p-like protein FORC54_2074 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FORC54_2075 PF00005 ABC transporter FORC54_2075 PF00664 ABC transporter transmembrane region FORC54_2076 PF03772 Competence protein FORC54_2076 PF00753 Metallo-beta-lactamase superfamily FORC54_2078 PF12704 MacB-like periplasmic core domain FORC54_2078 PF02687 FtsX-like permease family FORC54_2079 PF00005 ABC transporter FORC54_2080 PF02687 FtsX-like permease family FORC54_2080 PF12704 MacB-like periplasmic core domain FORC54_2082 PF00271 Helicase conserved C-terminal domain FORC54_2082 PF17757 UvrB interaction domain FORC54_2082 PF03461 TRCF domain FORC54_2082 PF02559 CarD-like/TRCF domain FORC54_2082 PF00270 DEAD/DEAH box helicase FORC54_2085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_2086 PF05728 Uncharacterised protein family (UPF0227) FORC54_2088 PF13036 Peptidoglycan-synthase activator LpoB FORC54_2088 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FORC54_2091 PF01230 HIT domain FORC54_2092 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2092 PF00672 HAMP domain FORC54_2094 PF01048 Phosphorylase superfamily FORC54_2095 PF00403 Heavy-metal-associated domain FORC54_2096 PF07085 DRTGG domain FORC54_2096 PF00571 CBS domain FORC54_2096 PF03061 Thioesterase superfamily FORC54_2096 PF00392 Bacterial regulatory proteins, gntR family FORC54_2097 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2098 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FORC54_2098 PF01276 Orn/Lys/Arg decarboxylase, major domain FORC54_2098 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FORC54_2099 PF13520 Amino acid permease FORC54_2101 PF18500 CadC C-terminal domain 1 FORC54_2101 PF00486 Transcriptional regulatory protein, C terminal FORC54_2102 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2103 PF00571 CBS domain FORC54_2103 PF01769 Divalent cation transporter FORC54_2103 PF03448 MgtE intracellular N domain FORC54_2104 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FORC54_2104 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FORC54_2105 PF13847 Methyltransferase domain FORC54_2108 PF00245 Alkaline phosphatase FORC54_2110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC54_2112 PF03692 Putative zinc- or iron-chelating domain FORC54_2113 PF03692 Putative zinc- or iron-chelating domain FORC54_2114 PF00230 Major intrinsic protein FORC54_2115 PF00486 Transcriptional regulatory protein, C terminal FORC54_2115 PF00072 Response regulator receiver domain FORC54_2116 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2116 PF00672 HAMP domain FORC54_2116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2119 PF02132 RecR protein FORC54_2119 PF13662 Toprim domain FORC54_2120 PF02575 YbaB/EbfC DNA-binding family FORC54_2121 PF12170 DNA polymerase III tau subunit V interacting with alpha FORC54_2121 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FORC54_2121 PF12169 DNA polymerase III subunits gamma and tau domain III FORC54_2122 PF00156 Phosphoribosyl transferase domain FORC54_2124 PF00072 Response regulator receiver domain FORC54_2125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2125 PF03466 LysR substrate binding domain FORC54_2126 PF00156 Phosphoribosyl transferase domain FORC54_2127 PF02674 Colicin V production protein FORC54_2128 PF05036 Sporulation related domain FORC54_2129 PF02875 Mur ligase family, glutamate ligase domain FORC54_2129 PF08245 Mur ligase middle domain FORC54_2130 PF01039 Carboxyl transferase domain FORC54_2130 PF17848 Acetyl-coA carboxylase zinc finger domain FORC54_2131 PF01416 tRNA pseudouridine synthase FORC54_2133 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC54_2133 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC54_2134 PF11890 Domain of unknown function (DUF3410) FORC54_2134 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_2134 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_2135 PF02801 Beta-ketoacyl synthase, C-terminal domain FORC54_2135 PF00109 Beta-ketoacyl synthase, N-terminal domain FORC54_2136 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FORC54_2136 PF01266 FAD dependent oxidoreductase FORC54_2137 PF08891 YfcL protein FORC54_2138 PF04315 Elongation factor P hydroxylase FORC54_2139 PF03458 UPF0126 domain FORC54_2140 PF01264 Chorismate synthase FORC54_2141 PF05175 Methyltransferase small domain FORC54_2142 PF01713 Smr domain FORC54_2143 PF00300 Histidine phosphatase superfamily (branch 1) FORC54_2144 PF00675 Insulinase (Peptidase family M16) FORC54_2144 PF05193 Peptidase M16 inactive domain FORC54_2145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FORC54_2145 PF00378 Enoyl-CoA hydratase/isomerase FORC54_2145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FORC54_2146 PF00108 Thiolase, N-terminal domain FORC54_2146 PF02803 Thiolase, C-terminal domain FORC54_2147 PF04542 Sigma-70 region 2 FORC54_2147 PF08281 Sigma-70, region 4 FORC54_2149 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC54_2150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC54_2151 PF04333 MlaA lipoprotein FORC54_2152 PF03918 Cytochrome C biogenesis protein FORC54_2153 PF03918 Cytochrome C biogenesis protein FORC54_2154 PF08534 Redoxin FORC54_2155 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FORC54_2155 PF01578 Cytochrome C assembly protein FORC54_2156 PF03100 CcmE FORC54_2157 PF04995 Heme exporter protein D (CcmD) FORC54_2158 PF01578 Cytochrome C assembly protein FORC54_2159 PF03379 CcmB protein FORC54_2160 PF00005 ABC transporter FORC54_2162 PF01584 CheW-like domain FORC54_2164 PF13614 AAA domain FORC54_2165 PF00072 Response regulator receiver domain FORC54_2165 PF01339 CheB methylesterase FORC54_2166 PF07194 P2 response regulator binding domain FORC54_2166 PF02895 Signal transducing histidine kinase, homodimeric domain FORC54_2166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2166 PF01584 CheW-like domain FORC54_2166 PF01627 Hpt domain FORC54_2167 PF04344 Chemotaxis phosphatase, CheZ FORC54_2168 PF00072 Response regulator receiver domain FORC54_2169 PF04545 Sigma-70, region 4 FORC54_2169 PF04539 Sigma-70 region 3 FORC54_2169 PF04542 Sigma-70 region 2 FORC54_2170 PF10609 NUBPL iron-transfer P-loop NTPase FORC54_2171 PF00448 SRP54-type protein, GTPase domain FORC54_2172 PF00771 FHIPEP family FORC54_2173 PF01312 FlhB HrpN YscU SpaS Family FORC54_2174 PF01311 Bacterial export proteins, family 1 FORC54_2175 PF01313 Bacterial export proteins, family 3 FORC54_2176 PF00813 FliP family FORC54_2177 PF04347 Flagellar biosynthesis protein, FliO FORC54_2178 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FORC54_2179 PF02154 Flagellar motor switch protein FliM FORC54_2179 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FORC54_2183 PF18269 T3SS EscN ATPase C-terminal domain FORC54_2183 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC54_2185 PF01706 FliG C-terminal domain FORC54_2185 PF14841 FliG middle domain FORC54_2185 PF14842 FliG N-terminal domain FORC54_2186 PF01514 Secretory protein of YscJ/FliF family FORC54_2186 PF08345 Flagellar M-ring protein C-terminal FORC54_2187 PF02049 Flagellar hook-basal body complex protein FliE FORC54_2188 PF02954 Bacterial regulatory protein, Fis family FORC54_2188 PF00072 Response regulator receiver domain FORC54_2188 PF00158 Sigma-54 interaction domain FORC54_2189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2189 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2190 PF00158 Sigma-54 interaction domain FORC54_2190 PF00072 Response regulator receiver domain FORC54_2190 PF02954 Bacterial regulatory protein, Fis family FORC54_2191 PF02561 Flagellar protein FliS FORC54_2193 PF07195 Flagellar hook-associated protein 2 C-terminus FORC54_2193 PF07196 Flagellin hook IN motif FORC54_2193 PF02465 Flagellar hook-associated protein 2 N-terminus FORC54_2194 PF03646 FlaG protein FORC54_2195 PF00700 Bacterial flagellin C-terminal helical region FORC54_2195 PF00669 Bacterial flagellin N-terminal helical region FORC54_2195 PF07196 Flagellin hook IN motif FORC54_2196 PF00669 Bacterial flagellin N-terminal helical region FORC54_2196 PF07196 Flagellin hook IN motif FORC54_2196 PF00700 Bacterial flagellin C-terminal helical region FORC54_2197 PF00669 Bacterial flagellin N-terminal helical region FORC54_2197 PF07196 Flagellin hook IN motif FORC54_2197 PF00700 Bacterial flagellin C-terminal helical region FORC54_2198 PF04261 Dyp-type peroxidase family FORC54_2203 PF03960 ArsC family FORC54_2204 PF01546 Peptidase family M20/M25/M40 FORC54_2204 PF07687 Peptidase dimerisation domain FORC54_2208 PF00701 Dihydrodipicolinate synthetase family FORC54_2209 PF01842 ACT domain FORC54_2210 PF00578 AhpC/TSA family FORC54_2211 PF01594 AI-2E family transporter FORC54_2213 PF01435 Peptidase family M48 FORC54_2213 PF13181 Tetratricopeptide repeat FORC54_2214 PF03960 ArsC family FORC54_2215 PF03358 NADPH-dependent FMN reductase FORC54_2218 PF00860 Permease family FORC54_2220 PF00586 AIR synthase related protein, N-terminal domain FORC54_2220 PF02769 AIR synthase related protein, C-terminal domain FORC54_2221 PF00551 Formyl transferase FORC54_2222 PF13230 Glutamine amidotransferases class-II FORC54_2223 PF13580 SIS domain FORC54_2224 PF09317 Domain of unknown function (DUF1974) FORC54_2224 PF02770 Acyl-CoA dehydrogenase, middle domain FORC54_2224 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FORC54_2224 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FORC54_2228 PF02254 TrkA-N domain FORC54_2228 PF00999 Sodium/hydrogen exchanger family FORC54_2229 PF02525 Flavodoxin-like fold FORC54_2231 PF00929 Exonuclease FORC54_2232 PF00075 RNase H FORC54_2233 PF08241 Methyltransferase domain FORC54_2234 PF00753 Metallo-beta-lactamase superfamily FORC54_2234 PF16123 Hydroxyacylglutathione hydrolase C-terminus FORC54_2235 PF01476 LysM domain FORC54_2235 PF01464 Transglycosylase SLT domain FORC54_2237 PF03372 Endonuclease/Exonuclease/phosphatase family FORC54_2238 PF00543 Nitrogen regulatory protein P-II FORC54_2239 PF00034 Cytochrome c FORC54_2240 PF01171 PP-loop family FORC54_2240 PF09179 TilS substrate binding domain FORC54_2240 PF11734 TilS substrate C-terminal domain FORC54_2241 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FORC54_2242 PF14579 Helix-hairpin-helix motif FORC54_2242 PF07733 Bacterial DNA polymerase III alpha NTPase domain FORC54_2242 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FORC54_2242 PF02811 PHP domain FORC54_2242 PF01336 OB-fold nucleic acid binding domain FORC54_2243 PF01351 Ribonuclease HII FORC54_2244 PF02684 Lipid-A-disaccharide synthetase FORC54_2245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FORC54_2245 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_2246 PF07977 FabA-like domain FORC54_2247 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_2247 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FORC54_2248 PF03938 Outer membrane protein (OmpH-like) FORC54_2249 PF07244 Surface antigen variable number repeat FORC54_2249 PF01103 Surface antigen FORC54_2250 PF02163 Peptidase family M50 FORC54_2250 PF17820 PDZ domain FORC54_2251 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FORC54_2251 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FORC54_2251 PF13288 DXP reductoisomerase C-terminal domain FORC54_2253 PF01255 Putative undecaprenyl diphosphate synthase FORC54_2254 PF01765 Ribosome recycling factor FORC54_2255 PF00696 Amino acid kinase family FORC54_2256 PF00889 Elongation factor TS FORC54_2257 PF00318 Ribosomal protein S2 FORC54_2258 PF00557 Metallopeptidase family M24 FORC54_2259 PF01966 HD domain FORC54_2259 PF08335 GlnD PII-uridylyltransferase FORC54_2259 PF01909 Nucleotidyltransferase domain FORC54_2260 PF11944 Protein of unknown function (DUF3461) FORC54_2261 PF00849 RNA pseudouridylate synthase FORC54_2262 PF04287 tRNA pseudouridine synthase C FORC54_2268 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FORC54_2269 PF03806 AbgT putative transporter family FORC54_2270 PF00444 Ribosomal protein L36 FORC54_2271 PF01197 Ribosomal protein L31 FORC54_2272 PF18389 TrmO C-terminal domain FORC54_2272 PF01980 tRNA-methyltransferase O FORC54_2273 PF03129 Anticodon binding domain FORC54_2273 PF04073 Aminoacyl-tRNA editing domain FORC54_2273 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FORC54_2275 PF06786 Uncharacterised protein family (UPF0253) FORC54_2277 PF00209 Sodium:neurotransmitter symporter family FORC54_2278 PF00041 Fibronectin type III domain FORC54_2278 PF00704 Glycosyl hydrolases family 18 FORC54_2280 PF00270 DEAD/DEAH box helicase FORC54_2280 PF00271 Helicase conserved C-terminal domain FORC54_2280 PF00570 HRDC domain FORC54_2280 PF16124 RecQ zinc-binding FORC54_2280 PF09382 RQC domain FORC54_2281 PF00817 impB/mucB/samB family FORC54_2281 PF11799 impB/mucB/samB family C-terminal domain FORC54_2282 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2282 PF00072 Response regulator receiver domain FORC54_2284 PF02424 ApbE family FORC54_2285 PF00970 Oxidoreductase FAD-binding domain FORC54_2285 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_2285 PF00175 Oxidoreductase NAD-binding domain FORC54_2286 PF02508 Rnf-Nqr subunit, membrane protein FORC54_2287 PF02508 Rnf-Nqr subunit, membrane protein FORC54_2288 PF04205 FMN-binding domain FORC54_2289 PF03116 NQR2, RnfD, RnfE family FORC54_2290 PF11973 NQRA C-terminal domain FORC54_2290 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FORC54_2291 PF01722 BolA-like protein FORC54_2292 PF05175 Methyltransferase small domain FORC54_2294 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FORC54_2295 PF07690 Major Facilitator Superfamily FORC54_2297 PF04542 Sigma-70 region 2 FORC54_2297 PF04545 Sigma-70, region 4 FORC54_2299 PF03502 Nucleoside-specific channel-forming protein, Tsx FORC54_2300 PF02558 Ketopantoate reductase PanE/ApbA FORC54_2300 PF08546 Ketopantoate reductase PanE/ApbA C terminal FORC54_2301 PF01965 DJ-1/PfpI family FORC54_2302 PF00266 Aminotransferase class-V FORC54_2305 PF02657 Fe-S metabolism associated domain FORC54_2306 PF00899 ThiF family FORC54_2307 PF03562 MltA specific insert domain FORC54_2307 PF06725 3D domain FORC54_2309 PF00583 Acetyltransferase (GNAT) family FORC54_2309 PF00696 Amino acid kinase family FORC54_2311 PF13538 UvrD-like helicase C-terminal domain FORC54_2312 PF13361 UvrD-like helicase C-terminal domain FORC54_2312 PF00580 UvrD/REP helicase N-terminal domain FORC54_2312 PF12705 PD-(D/E)XK nuclease superfamily FORC54_2313 PF17946 RecC C-terminal domain FORC54_2314 PF11893 Domain of unknown function (DUF3413) FORC54_2314 PF00884 Sulfatase FORC54_2316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2316 PF03466 LysR substrate binding domain FORC54_2317 PF07130 YebG protein FORC54_2318 PF14602 Hexapeptide repeat of succinyl-transferase FORC54_2318 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FORC54_2320 PF00230 Major intrinsic protein FORC54_2321 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FORC54_2321 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FORC54_2322 PF08220 DeoR-like helix-turn-helix domain FORC54_2322 PF00455 DeoR C terminal sensor domain FORC54_2323 PF01266 FAD dependent oxidoreductase FORC54_2323 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FORC54_2324 PF01544 CorA-like Mg2+ transporter protein FORC54_2326 PF02080 TrkA-C domain FORC54_2326 PF18030 RimK PreATP-grasp domain FORC54_2326 PF08443 RimK-like ATP-grasp domain FORC54_2329 PF01588 Putative tRNA binding domain FORC54_2330 PF00356 Bacterial regulatory proteins, lacI family FORC54_2331 PF17200 Single Cache domain 2 FORC54_2331 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2331 PF00672 HAMP domain FORC54_2332 PF01263 Aldose 1-epimerase FORC54_2333 PF00288 GHMP kinases N terminal domain FORC54_2333 PF08544 GHMP kinases C terminal FORC54_2333 PF10509 Galactokinase galactose-binding signature FORC54_2334 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FORC54_2334 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FORC54_2335 PF16363 GDP-mannose 4,6 dehydratase FORC54_2336 PF00356 Bacterial regulatory proteins, lacI family FORC54_2338 PF02929 Beta galactosidase small chain FORC54_2338 PF16353 Domain of unknown function(DUF4981) FORC54_2338 PF02837 Glycosyl hydrolases family 2, sugar binding domain FORC54_2338 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FORC54_2338 PF00703 Glycosyl hydrolases family 2 FORC54_2339 PF04074 YhcH/YjgK/YiaL FORC54_2340 PF13520 Amino acid permease FORC54_2341 PF13520 Amino acid permease FORC54_2343 PF01204 Trehalase FORC54_2346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2346 PF03466 LysR substrate binding domain FORC54_2347 PF02417 Chromate transporter FORC54_2351 PF00437 Type II/IV secretion system protein FORC54_2357 PF13629 Pilus formation protein N terminal region FORC54_2357 PF04972 BON domain FORC54_2357 PF00263 Bacterial type II and III secretion system protein FORC54_2364 PF02311 AraC-like ligand binding domain FORC54_2364 PF12833 Helix-turn-helix domain FORC54_2365 PF00501 AMP-binding enzyme FORC54_2366 PF00009 Elongation factor Tu GTP binding domain FORC54_2366 PF00679 Elongation factor G C-terminus FORC54_2366 PF14492 Elongation Factor G, domain II FORC54_2366 PF03144 Elongation factor Tu domain 2 FORC54_2366 PF03764 Elongation factor G, domain IV FORC54_2369 PF00563 EAL domain FORC54_2369 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2369 PF03707 Bacterial signalling protein N terminal repeat FORC54_2370 PF18073 Rubredoxin metal binding domain FORC54_2372 PF18429 Domain of unknown function (DUF5609) FORC54_2374 PF01048 Phosphorylase superfamily FORC54_2375 PF01676 Metalloenzyme superfamily FORC54_2376 PF02885 Glycosyl transferase family, helical bundle domain FORC54_2376 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FORC54_2376 PF00591 Glycosyl transferase family, a/b domain FORC54_2377 PF01791 DeoC/LacD family aldolase FORC54_2378 PF01773 Na+ dependent nucleoside transporter N-terminus FORC54_2378 PF07662 Na+ dependent nucleoside transporter C-terminus FORC54_2378 PF07670 Nucleoside recognition FORC54_2379 PF01026 TatD related DNase FORC54_2380 PF00009 Elongation factor Tu GTP binding domain FORC54_2380 PF03144 Elongation factor Tu domain 2 FORC54_2380 PF16658 Class II release factor RF3, C-terminal domain FORC54_2381 PF08448 PAS fold FORC54_2381 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2382 PF00563 EAL domain FORC54_2382 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2382 PF03707 Bacterial signalling protein N terminal repeat FORC54_2383 PF00583 Acetyltransferase (GNAT) family FORC54_2385 PF13508 Acetyltransferase (GNAT) domain FORC54_2387 PF00563 EAL domain FORC54_2387 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2387 PF03707 Bacterial signalling protein N terminal repeat FORC54_2390 PF01554 MatE FORC54_2392 PF13181 Tetratricopeptide repeat FORC54_2392 PF07719 Tetratricopeptide repeat FORC54_2393 PF00013 KH domain FORC54_2393 PF00575 S1 RNA binding domain FORC54_2393 PF03725 3' exoribonuclease family, domain 2 FORC54_2393 PF01138 3' exoribonuclease family, domain 1 FORC54_2393 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FORC54_2397 PF00312 Ribosomal protein S15 FORC54_2398 PF09157 Pseudouridine synthase II TruB, C-terminal FORC54_2398 PF16198 tRNA pseudouridylate synthase B C-terminal domain FORC54_2398 PF01509 TruB family pseudouridylate synthase (N terminal domain) FORC54_2399 PF02033 Ribosome-binding factor A FORC54_2400 PF00009 Elongation factor Tu GTP binding domain FORC54_2400 PF11987 Translation-initiation factor 2 FORC54_2400 PF08364 Bacterial translation initiation factor IF-2 associated region FORC54_2400 PF04760 Translation initiation factor IF-2, N-terminal region FORC54_2401 PF13184 NusA-like KH domain FORC54_2401 PF00575 S1 RNA binding domain FORC54_2401 PF08529 NusA N-terminal domain FORC54_2402 PF02576 RimP N-terminal domain FORC54_2402 PF17384 RimP C-terminal SH3 domain FORC54_2403 PF03840 Preprotein translocase SecG subunit FORC54_2404 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC54_2404 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC54_2404 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC54_2404 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC54_2405 PF00809 Pterin binding enzyme FORC54_2406 PF01434 Peptidase family M41 FORC54_2406 PF06480 FtsH Extracellular FORC54_2406 PF17862 AAA+ lid domain FORC54_2406 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_2407 PF01728 FtsJ-like methyltransferase FORC54_2408 PF01985 CRS1 / YhbY (CRM) domain FORC54_2409 PF03449 Transcription elongation factor, N-terminal FORC54_2409 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC54_2410 PF13609 Gram-negative porin FORC54_2411 PF01609 Transposase DDE domain FORC54_2411 PF13006 Insertion element 4 transposase N-terminal FORC54_2412 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FORC54_2413 PF04304 Protein of unknown function (DUF454) FORC54_2414 PF00579 tRNA synthetases class I (W and Y) FORC54_2415 PF01551 Peptidase family M23 FORC54_2415 PF04225 Opacity-associated protein A LysM-like domain FORC54_2416 PF00873 AcrB/AcrD/AcrF family FORC54_2417 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_2418 PF01521 Iron-sulphur cluster biosynthesis FORC54_2419 PF00202 Aminotransferase class-III FORC54_2420 PF01594 AI-2E family transporter FORC54_2421 PF05175 Methyltransferase small domain FORC54_2421 PF08468 Methyltransferase small domain N-terminal FORC54_2422 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2422 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2422 PF00072 Response regulator receiver domain FORC54_2422 PF09308 LuxQ, periplasmic FORC54_2423 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_2424 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2425 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2425 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_2426 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_2426 PF00005 ABC transporter FORC54_2427 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_2427 PF00005 ABC transporter FORC54_2429 PF01869 BadF/BadG/BcrA/BcrD ATPase family FORC54_2430 PF00728 Glycosyl hydrolase family 20, catalytic domain FORC54_2430 PF02838 Glycosyl hydrolase family 20, domain 2 FORC54_2431 PF06165 Glycosyltransferase family 36 FORC54_2431 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FORC54_2432 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC54_2432 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC54_2432 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC54_2433 PF00005 ABC transporter FORC54_2433 PF08402 TOBE domain FORC54_2435 PF13416 Bacterial extracellular solute-binding protein FORC54_2436 PF00909 Ammonium Transporter Family FORC54_2437 PF00543 Nitrogen regulatory protein P-II FORC54_2438 PF06062 Uncharacterised protein family (UPF0231) FORC54_2439 PF13556 PucR C-terminal helix-turn-helix domain FORC54_2439 PF17853 GGDEF-like domain FORC54_2439 PF05651 Putative sugar diacid recognition FORC54_2440 PF02447 GntP family permease FORC54_2441 PF02595 Glycerate kinase family FORC54_2442 PF00330 Aconitase family (aconitate hydratase) FORC54_2442 PF06434 Aconitate hydratase 2 N-terminus FORC54_2442 PF11791 Aconitate B N-terminal domain FORC54_2443 PF01734 Patatin-like phospholipase FORC54_2444 PF14814 Bifunctional transglycosylase second domain FORC54_2444 PF00905 Penicillin binding protein transpeptidase domain FORC54_2444 PF00912 Transglycosylase FORC54_2445 PF08482 ATP-dependent helicase C-terminal FORC54_2445 PF00271 Helicase conserved C-terminal domain FORC54_2445 PF04408 Helicase associated domain (HA2) FORC54_2445 PF00270 DEAD/DEAH box helicase FORC54_2446 PF03749 Sugar fermentation stimulation protein RE domain FORC54_2446 PF17746 SfsA N-terminal OB domain FORC54_2447 PF01258 Prokaryotic dksA/traR C4-type zinc finger FORC54_2448 PF00749 tRNA synthetases class I (E and Q), catalytic domain FORC54_2449 PF01743 Poly A polymerase head domain FORC54_2449 PF12626 Polymerase A arginine-rich C-terminus FORC54_2449 PF12627 Probable RNA and SrmB- binding site of polymerase A FORC54_2450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FORC54_2451 PF02548 Ketopantoate hydroxymethyltransferase FORC54_2452 PF02569 Pantoate-beta-alanine ligase FORC54_2453 PF01061 ABC-2 type transporter FORC54_2454 PF00005 ABC transporter FORC54_2455 PF00916 Sulfate permease family FORC54_2455 PF01740 STAS domain FORC54_2456 PF00484 Carbonic anhydrase FORC54_2457 PF00156 Phosphoribosyl transferase domain FORC54_2458 PF00440 Bacterial regulatory proteins, tetR family FORC54_2459 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_2459 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC54_2460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FORC54_2460 PF00364 Biotin-requiring enzyme FORC54_2460 PF02817 e3 binding domain FORC54_2461 PF00456 Transketolase, thiamine diphosphate binding domain FORC54_2461 PF17831 Pyruvate dehydrogenase E1 component middle domain FORC54_2462 PF07729 FCD domain FORC54_2462 PF00392 Bacterial regulatory proteins, gntR family FORC54_2464 PF01510 N-acetylmuramoyl-L-alanine amidase FORC54_2465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FORC54_2465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FORC54_2466 PF00114 Pilin (bacterial filament) FORC54_2466 PF07963 Prokaryotic N-terminal methylation motif FORC54_2467 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FORC54_2467 PF00437 Type II/IV secretion system protein FORC54_2468 PF00482 Type II secretion system (T2SS), protein F FORC54_2469 PF01478 Type IV leader peptidase family FORC54_2469 PF06750 Bacterial Peptidase A24 N-terminal domain FORC54_2470 PF01121 Dephospho-CoA kinase FORC54_2471 PF07072 Cell division protein FORC54_2472 PF01245 Ribosomal protein L19 FORC54_2473 PF01746 tRNA (Guanine-1)-methyltransferase FORC54_2474 PF01782 RimM N-terminal domain FORC54_2474 PF05239 PRC-barrel domain FORC54_2475 PF00886 Ribosomal protein S16 FORC54_2476 PF00448 SRP54-type protein, GTPase domain FORC54_2476 PF02881 SRP54-type protein, helical bundle domain FORC54_2476 PF02978 Signal peptide binding domain FORC54_2477 PF01578 Cytochrome C assembly protein FORC54_2478 PF00571 CBS domain FORC54_2478 PF01595 Cyclin M transmembrane N-terminal domain FORC54_2478 PF03471 Transporter associated domain FORC54_2479 PF02664 S-Ribosylhomocysteinase (LuxS) FORC54_2481 PF04262 Glutamate-cysteine ligase FORC54_2482 PF00675 Insulinase (Peptidase family M16) FORC54_2482 PF05193 Peptidase M16 inactive domain FORC54_2483 PF09335 SNARE associated Golgi protein FORC54_2484 PF08240 Alcohol dehydrogenase GroES-like domain FORC54_2484 PF00107 Zinc-binding dehydrogenase FORC54_2485 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FORC54_2486 PF00364 Biotin-requiring enzyme FORC54_2486 PF00682 HMGL-like FORC54_2486 PF02436 Conserved carboxylase domain FORC54_2487 PF04277 Oxaloacetate decarboxylase, gamma chain FORC54_2489 PF02599 Global regulator protein family FORC54_2490 PF00696 Amino acid kinase family FORC54_2490 PF01842 ACT domain FORC54_2490 PF13840 ACT domain FORC54_2491 PF02272 DHHA1 domain FORC54_2491 PF01411 tRNA synthetases class II (A) FORC54_2491 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FORC54_2492 PF02631 RecX family FORC54_2493 PF00154 recA bacterial DNA recombination protein FORC54_2494 PF02464 Competence-damaged protein FORC54_2495 PF00488 MutS domain V FORC54_2495 PF05190 MutS family domain IV FORC54_2495 PF05192 MutS domain III FORC54_2495 PF05188 MutS domain II FORC54_2495 PF01624 MutS domain I FORC54_2496 PF00140 Sigma-70 factor, region 1.2 FORC54_2496 PF04539 Sigma-70 region 3 FORC54_2496 PF04545 Sigma-70, region 4 FORC54_2496 PF04542 Sigma-70 region 2 FORC54_2497 PF01551 Peptidase family M23 FORC54_2497 PF01476 LysM domain FORC54_2499 PF01975 Survival protein SurE FORC54_2500 PF01142 tRNA pseudouridine synthase D (TruD) FORC54_2501 PF02542 YgbB family FORC54_2502 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FORC54_2503 PF04977 Septum formation initiator FORC54_2504 PF13006 Insertion element 4 transposase N-terminal FORC54_2504 PF01609 Transposase DDE domain FORC54_2505 PF03952 Enolase, N-terminal domain FORC54_2505 PF00113 Enolase, C-terminal TIM barrel domain FORC54_2506 PF06418 CTP synthase N-terminus FORC54_2506 PF00117 Glutamine amidotransferase class-I FORC54_2507 PF03819 MazG nucleotide pyrophosphohydrolase domain FORC54_2508 PF13291 ACT domain FORC54_2508 PF04607 Region found in RelA / SpoT proteins FORC54_2508 PF02824 TGS domain FORC54_2509 PF05958 tRNA (Uracil-5-)-methyltransferase FORC54_2509 PF01938 TRAM domain FORC54_2510 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC54_2510 PF00072 Response regulator receiver domain FORC54_2510 PF00672 HAMP domain FORC54_2510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2510 PF01627 Hpt domain FORC54_2511 PF00563 EAL domain FORC54_2511 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2514 PF01648 4'-phosphopantetheinyl transferase superfamily FORC54_2515 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FORC54_2516 PF02565 Recombination protein O C terminal FORC54_2516 PF11967 Recombination protein O N terminal FORC54_2517 PF07650 KH domain FORC54_2517 PF01926 50S ribosome-binding GTPase FORC54_2518 PF14622 Ribonuclease-III-like FORC54_2518 PF00035 Double-stranded RNA binding motif FORC54_2519 PF10502 Signal peptidase, peptidase S26 FORC54_2520 PF06421 GTP-binding protein LepA C-terminus FORC54_2520 PF03144 Elongation factor Tu domain 2 FORC54_2520 PF00009 Elongation factor Tu GTP binding domain FORC54_2520 PF00679 Elongation factor G C-terminus FORC54_2522 PF03888 MucB/RseB N-terminal domain FORC54_2522 PF17188 MucB/RseB C-terminal domain FORC54_2523 PF03873 Anti sigma-E protein RseA, C-terminal domain FORC54_2523 PF03872 Anti sigma-E protein RseA, N-terminal domain FORC54_2524 PF04542 Sigma-70 region 2 FORC54_2524 PF08281 Sigma-70, region 4 FORC54_2525 PF00890 FAD binding domain FORC54_2525 PF02910 Fumarate reductase flavoprotein C-term FORC54_2527 PF03937 Flavinator of succinate dehydrogenase FORC54_2528 PF01571 Aminomethyltransferase folate-binding domain FORC54_2531 PF01494 FAD binding domain FORC54_2532 PF01494 FAD binding domain FORC54_2533 PF03695 Uncharacterised protein family (UPF0149) FORC54_2534 PF05164 Cell division protein ZapA FORC54_2535 PF01812 5-formyltetrahydrofolate cyclo-ligase family FORC54_2536 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FORC54_2537 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_2537 PF01842 ACT domain FORC54_2537 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_2539 PF03466 LysR substrate binding domain FORC54_2539 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2540 PF01810 LysE type translocator FORC54_2541 PF05552 Conserved TM helix FORC54_2541 PF00924 Mechanosensitive ion channel FORC54_2542 PF01116 Fructose-bisphosphate aldolase class-II FORC54_2543 PF00162 Phosphoglycerate kinase FORC54_2544 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC54_2544 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_2546 PF02779 Transketolase, pyrimidine binding domain FORC54_2546 PF00456 Transketolase, thiamine diphosphate binding domain FORC54_2546 PF02780 Transketolase, C-terminal domain FORC54_2547 PF02772 S-adenosylmethionine synthetase, central domain FORC54_2547 PF02773 S-adenosylmethionine synthetase, C-terminal domain FORC54_2547 PF00438 S-adenosylmethionine synthetase, N-terminal domain FORC54_2549 PF10263 SprT-like family FORC54_2549 PF17283 SprT-like zinc ribbon domain FORC54_2550 PF04231 Endonuclease I FORC54_2551 PF04452 RNA methyltransferase FORC54_2552 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FORC54_2552 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FORC54_2553 PF02622 Uncharacterized ACR, COG1678 FORC54_2554 PF03652 Holliday junction resolvase FORC54_2555 PF00437 Type II/IV secretion system protein FORC54_2556 PF00437 Type II/IV secretion system protein FORC54_2557 PF01168 Alanine racemase, N-terminal domain FORC54_2558 PF14748 Pyrroline-5-carboxylate reductase dimerisation FORC54_2558 PF03807 NADP oxidoreductase coenzyme F420-dependent FORC54_2559 PF02325 YGGT family FORC54_2560 PF02594 Uncharacterised ACR, YggU family COG1872 FORC54_2562 PF01725 Ham1 family FORC54_2563 PF06969 HemN C-terminal domain FORC54_2563 PF04055 Radical SAM superfamily FORC54_2564 PF04960 Glutaminase FORC54_2565 PF02390 Putative methyltransferase FORC54_2566 PF00633 Helix-hairpin-helix motif FORC54_2566 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC54_2566 PF14815 NUDIX domain FORC54_2567 PF04362 Bacterial Fe(2+) trafficking FORC54_2568 PF01464 Transglycosylase SLT domain FORC54_2568 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FORC54_2569 PF00672 HAMP domain FORC54_2569 PF17200 Single Cache domain 2 FORC54_2569 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2574 PF00356 Bacterial regulatory proteins, lacI family FORC54_2575 PF04794 YdjC-like protein FORC54_2576 PF11975 Family 4 glycosyl hydrolase C-terminal domain FORC54_2576 PF02056 Family 4 glycosyl hydrolase FORC54_2577 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FORC54_2578 PF02378 Phosphotransferase system, EIIC FORC54_2579 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_2580 PF01522 Polysaccharide deacetylase FORC54_2582 PF03739 Lipopolysaccharide export system permease LptF/LptG FORC54_2583 PF03739 Lipopolysaccharide export system permease LptF/LptG FORC54_2584 PF02789 Cytosol aminopeptidase family, N-terminal domain FORC54_2584 PF00883 Cytosol aminopeptidase family, catalytic domain FORC54_2585 PF04364 DNA polymerase III chi subunit, HolC FORC54_2586 PF10458 Valyl tRNA synthetase tRNA binding arm FORC54_2586 PF00133 tRNA synthetases class I (I, L, M and V) FORC54_2586 PF08264 Anticodon-binding domain of tRNA FORC54_2588 PF05987 Bacterial protein of unknown function (DUF898) FORC54_2590 PF00583 Acetyltransferase (GNAT) family FORC54_2592 PF06877 Regulator of ribonuclease activity B FORC54_2594 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FORC54_2594 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FORC54_2595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FORC54_2595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FORC54_2596 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FORC54_2596 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FORC54_2597 PF01042 Endoribonuclease L-PSP FORC54_2598 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_2598 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_2599 PF00849 RNA pseudouridylate synthase FORC54_2600 PF00176 SNF2 family N-terminal domain FORC54_2600 PF12137 RNA polymerase recycling family C-terminal FORC54_2600 PF00271 Helicase conserved C-terminal domain FORC54_2600 PF18339 RapA N-terminal Tudor like domain 1 FORC54_2600 PF18337 RapA N-terminal Tudor like domain FORC54_2601 PF13638 PIN domain FORC54_2601 PF02562 PhoH-like protein FORC54_2602 PF01523 Putative modulator of DNA gyrase FORC54_2603 PF00795 Carbon-nitrogen hydrolase FORC54_2604 PF13116 Protein of unknown function FORC54_2604 PF13502 AsmA-like C-terminal region FORC54_2605 PF10150 Ribonuclease E/G family FORC54_2605 PF00575 S1 RNA binding domain FORC54_2606 PF02545 Maf-like protein FORC54_2607 PF04093 rod shape-determining protein MreD FORC54_2608 PF04085 rod shape-determining protein MreC FORC54_2616 PF07963 Prokaryotic N-terminal methylation motif FORC54_2616 PF00114 Pilin (bacterial filament) FORC54_2618 PF00482 Type II secretion system (T2SS), protein F FORC54_2619 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FORC54_2619 PF00437 Type II/IV secretion system protein FORC54_2621 PF13401 AAA domain FORC54_2621 PF01471 Putative peptidoglycan binding domain FORC54_2622 PF03958 Bacterial type II/III secretion system short domain FORC54_2622 PF00263 Bacterial type II and III secretion system protein FORC54_2622 PF07660 Secretin and TonB N terminus short domain FORC54_2622 PF11741 AMIN domain FORC54_2626 PF00563 EAL domain FORC54_2626 PF17157 Gammaproteobacterial periplasmic sensor domain FORC54_2626 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2627 PF00436 Single-strand binding protein family FORC54_2628 PF00196 Bacterial regulatory proteins, luxR family FORC54_2629 PF00483 Nucleotidyl transferase FORC54_2630 PF17760 UvrA interaction domain FORC54_2630 PF17755 UvrA DNA-binding domain FORC54_2630 PF00005 ABC transporter FORC54_2632 PF00266 Aminotransferase class-V FORC54_2633 PF00696 Amino acid kinase family FORC54_2633 PF01842 ACT domain FORC54_2634 PF02310 B12 binding domain FORC54_2634 PF02607 B12 binding domain FORC54_2634 PF02965 Vitamin B12 dependent methionine synthase, activation domain FORC54_2634 PF00809 Pterin binding enzyme FORC54_2634 PF02574 Homocysteine S-methyltransferase FORC54_2635 PF00999 Sodium/hydrogen exchanger family FORC54_2636 PF00072 Response regulator receiver domain FORC54_2636 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2638 PF01507 Phosphoadenosine phosphosulfate reductase family FORC54_2639 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FORC54_2639 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FORC54_2640 PF00667 FAD binding domain FORC54_2640 PF00175 Oxidoreductase NAD-binding domain FORC54_2640 PF00258 Flavodoxin FORC54_2644 PF01207 Dihydrouridine synthase (Dus) FORC54_2645 PF01475 Ferric uptake regulator family FORC54_2647 PF00342 Phosphoglucose isomerase FORC54_2648 PF01894 Uncharacterised protein family UPF0047 FORC54_2650 PF00842 Alanine racemase, C-terminal domain FORC54_2650 PF01168 Alanine racemase, N-terminal domain FORC54_2651 PF00772 DnaB-like helicase N terminal domain FORC54_2651 PF03796 DnaB-like helicase C terminal domain FORC54_2653 PF03948 Ribosomal protein L9, C-terminal domain FORC54_2653 PF01281 Ribosomal protein L9, N-terminal domain FORC54_2654 PF01084 Ribosomal protein S18 FORC54_2655 PF00436 Single-strand binding protein family FORC54_2656 PF01250 Ribosomal protein S6 FORC54_2657 PF00834 Ribulose-phosphate 3 epimerase family FORC54_2658 PF02086 D12 class N6 adenine-specific DNA methyltransferase FORC54_2660 PF01761 3-dehydroquinate synthase FORC54_2661 PF01202 Shikimate kinase FORC54_2662 PF07660 Secretin and TonB N terminus short domain FORC54_2662 PF03958 Bacterial type II/III secretion system short domain FORC54_2662 PF00263 Bacterial type II and III secretion system protein FORC54_2662 PF11741 AMIN domain FORC54_2667 PF17092 Penicillin-binding protein OB-like domain FORC54_2667 PF00912 Transglycosylase FORC54_2667 PF00905 Penicillin binding protein transpeptidase domain FORC54_2668 PF03466 LysR substrate binding domain FORC54_2668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2670 PF00206 Lyase FORC54_2670 PF00583 Acetyltransferase (GNAT) family FORC54_2670 PF14698 Argininosuccinate lyase C-terminal FORC54_2671 PF00764 Arginosuccinate synthase FORC54_2672 PF00696 Amino acid kinase family FORC54_2673 PF01118 Semialdehyde dehydrogenase, NAD binding domain FORC54_2673 PF02774 Semialdehyde dehydrogenase, dimerisation domain FORC54_2674 PF07687 Peptidase dimerisation domain FORC54_2674 PF01546 Peptidase family M20/M25/M40 FORC54_2675 PF00311 Phosphoenolpyruvate carboxylase FORC54_2677 PF02219 Methylenetetrahydrofolate reductase FORC54_2678 PF00696 Amino acid kinase family FORC54_2678 PF00742 Homoserine dehydrogenase FORC54_2678 PF03447 Homoserine dehydrogenase, NAD binding domain FORC54_2679 PF01053 Cys/Met metabolism PLP-dependent enzyme FORC54_2680 PF01340 Met Apo-repressor, MetJ FORC54_2681 PF00390 Malic enzyme, N-terminal domain FORC54_2681 PF03949 Malic enzyme, NAD binding domain FORC54_2682 PF01197 Ribosomal protein L31 FORC54_2683 PF18074 Primosomal protein N C-terminal domain FORC54_2683 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FORC54_2683 PF17764 3′ DNA-binding domain (3′BD) FORC54_2683 PF00270 DEAD/DEAH box helicase FORC54_2683 PF00271 Helicase conserved C-terminal domain FORC54_2684 PF00356 Bacterial regulatory proteins, lacI family FORC54_2686 PF00227 Proteasome subunit FORC54_2687 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_2687 PF07724 AAA domain (Cdc48 subfamily) FORC54_2687 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_2688 PF01040 UbiA prenyltransferase family FORC54_2689 PF03737 Aldolase/RraA FORC54_2690 PF06005 Cell division protein ZapB FORC54_2691 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FORC54_2696 PF00121 Triosephosphate isomerase FORC54_2697 PF16363 GDP-mannose 4,6 dehydratase FORC54_2698 PF00210 Ferritin-like domain FORC54_2699 PF04324 BFD-like [2Fe-2S] binding domain FORC54_2700 PF03143 Elongation factor Tu C-terminal domain FORC54_2700 PF03144 Elongation factor Tu domain 2 FORC54_2700 PF00009 Elongation factor Tu GTP binding domain FORC54_2701 PF14492 Elongation Factor G, domain II FORC54_2701 PF03764 Elongation factor G, domain IV FORC54_2701 PF03144 Elongation factor Tu domain 2 FORC54_2701 PF00679 Elongation factor G C-terminus FORC54_2701 PF00009 Elongation factor Tu GTP binding domain FORC54_2702 PF00177 Ribosomal protein S7p/S5e FORC54_2703 PF00164 Ribosomal protein S12/S23 FORC54_2705 PF02635 DsrE/DsrF-like family FORC54_2706 PF02635 DsrE/DsrF-like family FORC54_2707 PF13309 HTH domain FORC54_2707 PF08348 YheO-like PAS domain FORC54_2708 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC54_2708 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_2710 PF04102 SlyX FORC54_2711 PF01112 Asparaginase FORC54_2712 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_2714 PF00999 Sodium/hydrogen exchanger family FORC54_2714 PF02254 TrkA-N domain FORC54_2715 PF02525 Flavodoxin-like fold FORC54_2716 PF12848 ABC transporter FORC54_2716 PF00005 ABC transporter FORC54_2718 PF00561 alpha/beta hydrolase fold FORC54_2719 PF06794 Uncharacterised protein family (UPF0270) FORC54_2720 PF00485 Phosphoribulokinase / Uridine kinase family FORC54_2721 PF13545 Crp-like helix-turn-helix domain FORC54_2721 PF00027 Cyclic nucleotide-binding domain FORC54_2723 PF00171 Aldehyde dehydrogenase family FORC54_2724 PF04958 Arginine N-succinyltransferase beta subunit FORC54_2725 PF00202 Aminotransferase class-III FORC54_2726 PF00117 Glutamine amidotransferase class-I FORC54_2730 PF00579 tRNA synthetases class I (W and Y) FORC54_2731 PF13419 Haloacid dehalogenase-like hydrolase FORC54_2732 PF00588 SpoU rRNA Methylase family FORC54_2732 PF08032 RNA 2'-O ribose methyltransferase substrate binding FORC54_2733 PF00575 S1 RNA binding domain FORC54_2733 PF00773 RNB domain FORC54_2733 PF08206 Ribonuclease B OB domain FORC54_2733 PF08461 Ribonuclease R winged-helix domain FORC54_2733 PF17876 Cold shock domain FORC54_2734 PF01979 Amidohydrolase family FORC54_2735 PF02082 Transcriptional regulator FORC54_2736 PF00175 Oxidoreductase NAD-binding domain FORC54_2736 PF00042 Globin FORC54_2736 PF00970 Oxidoreductase FAD-binding domain FORC54_2737 PF08238 Sel1 repeat FORC54_2738 PF00709 Adenylosuccinate synthetase FORC54_2739 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FORC54_2740 PF01145 SPFH domain / Band 7 family FORC54_2741 PF12221 Bacterial membrane protein N terminal FORC54_2741 PF01145 SPFH domain / Band 7 family FORC54_2742 PF16360 GTP-binding GTPase Middle Region FORC54_2742 PF13167 GTP-binding GTPase N-terminal FORC54_2742 PF01926 50S ribosome-binding GTPase FORC54_2743 PF17209 Hfq protein FORC54_2745 PF01119 DNA mismatch repair protein, C-terminal domain FORC54_2745 PF08676 MutL C terminal dimerisation domain FORC54_2746 PF01520 N-acetylmuramoyl-L-alanine amidase FORC54_2747 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FORC54_2748 PF08331 Domain of unknown function (DUF1730) FORC54_2749 PF00929 Exonuclease FORC54_2750 PF03193 RsgA GTPase FORC54_2751 PF02666 Phosphatidylserine decarboxylase FORC54_2752 PF00939 Sodium:sulfate symporter transmembrane region FORC54_2754 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FORC54_2754 PF01676 Metalloenzyme superfamily FORC54_2756 PF00581 Rhodanese-like domain FORC54_2757 PF02556 Preprotein translocase subunit SecB FORC54_2758 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FORC54_2758 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FORC54_2759 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_2759 PF06426 Serine acetyltransferase, N-terminal FORC54_2760 PF01551 Peptidase family M23 FORC54_2762 PF08360 QacR-like protein, C-terminal region FORC54_2762 PF00440 Bacterial regulatory proteins, tetR family FORC54_2764 PF00152 tRNA synthetases class II (D, K and N) FORC54_2766 PF00890 FAD binding domain FORC54_2766 PF02910 Fumarate reductase flavoprotein C-term FORC54_2767 PF13183 4Fe-4S dicluster domain FORC54_2767 PF13085 2Fe-2S iron-sulfur cluster binding domain FORC54_2768 PF02300 Fumarate reductase subunit C FORC54_2769 PF02313 Fumarate reductase subunit D FORC54_2772 PF01132 Elongation factor P (EF-P) OB domain FORC54_2772 PF08207 Elongation factor P (EF-P) KOW-like domain FORC54_2772 PF09285 Elongation factor P, C-terminal FORC54_2773 PF04055 Radical SAM superfamily FORC54_2774 PF02308 MgtC family FORC54_2776 PF00118 TCP-1/cpn60 chaperonin family FORC54_2777 PF00166 Chaperonin 10 Kd subunit FORC54_2778 PF01554 MatE FORC54_2779 PF00365 Phosphofructokinase FORC54_2780 PF01545 Cation efflux family FORC54_2780 PF16916 Dimerisation domain of Zinc Transporter FORC54_2781 PF07813 LTXXQ motif family protein FORC54_2782 PF00486 Transcriptional regulatory protein, C terminal FORC54_2782 PF00072 Response regulator receiver domain FORC54_2783 PF16527 Two-component sensor protein CpxA, periplasmic domain FORC54_2783 PF00672 HAMP domain FORC54_2783 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2783 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2784 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FORC54_2784 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FORC54_2785 PF00588 SpoU rRNA Methylase family FORC54_2786 PF04186 FxsA cytoplasmic membrane protein FORC54_2787 PF10415 Fumarase C C-terminus FORC54_2787 PF00206 Lyase FORC54_2788 PF03605 Anaerobic c4-dicarboxylate membrane transporter FORC54_2789 PF02683 Cytochrome C biogenesis protein transmembrane region FORC54_2789 PF11412 Disulphide bond corrector protein DsbC FORC54_2790 PF00196 Bacterial regulatory proteins, luxR family FORC54_2790 PF00072 Response regulator receiver domain FORC54_2791 PF01914 MarC family integral membrane protein FORC54_2793 PF00474 Sodium:solute symporter family FORC54_2796 PF00072 Response regulator receiver domain FORC54_2796 PF01627 Hpt domain FORC54_2796 PF00512 His Kinase A (phospho-acceptor) domain FORC54_2796 PF00672 HAMP domain FORC54_2796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_2797 PF12832 MFS_1 like family FORC54_2800 PF13193 AMP-binding enzyme C-terminal domain FORC54_2800 PF00501 AMP-binding enzyme FORC54_2800 PF16177 Acetyl-coenzyme A synthetase N-terminus FORC54_2801 PF01220 Dehydroquinase class II FORC54_2802 PF00364 Biotin-requiring enzyme FORC54_2803 PF00289 Biotin carboxylase, N-terminal domain FORC54_2803 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FORC54_2803 PF02785 Biotin carboxylase C-terminal domain FORC54_2805 PF01207 Dihydrouridine synthase (Dus) FORC54_2806 PF02954 Bacterial regulatory protein, Fis family FORC54_2807 PF17200 Single Cache domain 2 FORC54_2807 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_2807 PF00672 HAMP domain FORC54_2808 PF13411 MerR HTH family regulatory protein FORC54_2809 PF02142 MGS-like domain FORC54_2809 PF01808 AICARFT/IMPCHase bienzyme FORC54_2810 PF02844 Phosphoribosylglycinamide synthetase, N domain FORC54_2810 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FORC54_2810 PF02843 Phosphoribosylglycinamide synthetase, C domain FORC54_2812 PF00216 Bacterial DNA-binding protein FORC54_2813 PF00571 CBS domain FORC54_2813 PF01595 Cyclin M transmembrane N-terminal domain FORC54_2814 PF04222 Protein of unknown function (DUF416) FORC54_2815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_2815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_2816 PF03167 Uracil DNA glycosylase superfamily FORC54_2817 PF14706 Transposase DNA-binding FORC54_2817 PF01609 Transposase DDE domain FORC54_2817 PF02281 Transposase Tn5 dimerisation domain FORC54_2818 PF01208 Uroporphyrinogen decarboxylase (URO-D) FORC54_2821 PF09297 NADH pyrophosphatase zinc ribbon domain FORC54_2821 PF00293 NUDIX domain FORC54_2822 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FORC54_2823 PF04998 RNA polymerase Rpb1, domain 5 FORC54_2823 PF04983 RNA polymerase Rpb1, domain 3 FORC54_2823 PF00623 RNA polymerase Rpb1, domain 2 FORC54_2823 PF04997 RNA polymerase Rpb1, domain 1 FORC54_2823 PF05000 RNA polymerase Rpb1, domain 4 FORC54_2824 PF10385 RNA polymerase beta subunit external 1 domain FORC54_2824 PF00562 RNA polymerase Rpb2, domain 6 FORC54_2824 PF04560 RNA polymerase Rpb2, domain 7 FORC54_2824 PF04563 RNA polymerase beta subunit FORC54_2824 PF04565 RNA polymerase Rpb2, domain 3 FORC54_2824 PF04561 RNA polymerase Rpb2, domain 2 FORC54_2825 PF16320 Ribosomal protein L7/L12 dimerisation domain FORC54_2825 PF00542 Ribosomal protein L7/L12 C-terminal domain FORC54_2826 PF00466 Ribosomal protein L10 FORC54_2827 PF00687 Ribosomal protein L1p/L10e family FORC54_2828 PF00298 Ribosomal protein L11, RNA binding domain FORC54_2828 PF03946 Ribosomal protein L11, N-terminal domain FORC54_2829 PF00467 KOW motif FORC54_2829 PF02357 Transcription termination factor nusG FORC54_2830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FORC54_2831 PF03143 Elongation factor Tu C-terminal domain FORC54_2831 PF03144 Elongation factor Tu domain 2 FORC54_2831 PF00009 Elongation factor Tu GTP binding domain FORC54_2832 PF00485 Phosphoribulokinase / Uridine kinase family FORC54_2833 PF03099 Biotin/lipoate A/B protein ligase family FORC54_2833 PF02237 Biotin protein ligase C terminal domain FORC54_2833 PF08279 HTH domain FORC54_2834 PF01565 FAD binding domain FORC54_2834 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FORC54_2836 PF13091 PLD-like domain FORC54_2838 PF13358 DDE superfamily endonuclease FORC54_2840 PF01177 Asp/Glu/Hydantoin racemase FORC54_2842 PF00593 TonB dependent receptor FORC54_2842 PF07715 TonB-dependent Receptor Plug Domain FORC54_2843 PF05958 tRNA (Uracil-5-)-methyltransferase FORC54_2848 PF01434 Peptidase family M41 FORC54_2848 PF17862 AAA+ lid domain FORC54_2848 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_2848 PF06480 FtsH Extracellular FORC54_2849 PF00075 RNase H FORC54_2851 PF04002 RadC-like JAB domain FORC54_2861 PF00075 RNase H FORC54_2869 PF00440 Bacterial regulatory proteins, tetR family FORC54_2870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC54_2870 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_2872 PF00717 Peptidase S24-like FORC54_2872 PF01726 LexA DNA binding domain FORC54_2873 PF01553 Acyltransferase FORC54_2874 PF01040 UbiA prenyltransferase family FORC54_2875 PF04345 Chorismate lyase FORC54_2876 PF03748 Flagellar basal body-associated protein FliL FORC54_2877 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FORC54_2877 PF01694 Rhomboid family FORC54_2878 PF00581 Rhodanese-like domain FORC54_2879 PF04545 Sigma-70, region 4 FORC54_2879 PF04542 Sigma-70 region 2 FORC54_2879 PF00140 Sigma-70 factor, region 1.2 FORC54_2880 PF18075 FtsX extracellular domain FORC54_2881 PF00005 ABC transporter FORC54_2882 PF02881 SRP54-type protein, helical bundle domain FORC54_2882 PF00448 SRP54-type protein, GTPase domain FORC54_2885 PF01914 MarC family integral membrane protein FORC54_2893 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_2893 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC54_2894 PF01022 Bacterial regulatory protein, arsR family FORC54_2895 PF08668 HDOD domain FORC54_2895 PF00563 EAL domain FORC54_2896 PF01810 LysE type translocator FORC54_2897 PF12146 Serine aminopeptidase, S33 FORC54_2902 PF00563 EAL domain FORC54_2902 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2902 PF08495 FIST N domain FORC54_2902 PF10442 FIST C domain FORC54_2903 PF13419 Haloacid dehalogenase-like hydrolase FORC54_2904 PF00589 Phage integrase family FORC54_2904 PF02899 Phage integrase, N-terminal SAM-like domain FORC54_2906 PF01678 Diaminopimelate epimerase FORC54_2907 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FORC54_2907 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FORC54_2909 PF01491 Frataxin-like domain FORC54_2910 PF12633 Adenylate cyclase NT domain FORC54_2910 PF01295 Adenylate cyclase, class-I FORC54_2912 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FORC54_2912 PF03900 Porphobilinogen deaminase, C-terminal domain FORC54_2913 PF02602 Uroporphyrinogen-III synthase HemD FORC54_2914 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FORC54_2917 PF10625 Universal stress protein B (UspB) FORC54_2918 PF00210 Ferritin-like domain FORC54_2919 PF00582 Universal stress protein family FORC54_2920 PF00892 EamA-like transporter family FORC54_2922 PF04445 Putative SAM-dependent methyltransferase FORC54_2923 PF00563 EAL domain FORC54_2923 PF00990 Diguanylate cyclase, GGDEF domain FORC54_2923 PF08448 PAS fold FORC54_2924 PF01037 Lrp/AsnC ligand binding domain FORC54_2925 PF01432 Peptidase family M3 FORC54_2926 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FORC54_2927 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_2927 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC54_2928 PF01081 KDPG and KHG aldolase FORC54_2929 PF02447 GntP family permease FORC54_2930 PF01202 Shikimate kinase FORC54_2931 PF00920 Dehydratase family FORC54_2932 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC54_2932 PF00356 Bacterial regulatory proteins, lacI family FORC54_2935 PF03793 PASTA domain FORC54_2935 PF00069 Protein kinase domain FORC54_2942 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2942 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_2944 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_2945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_2945 PF00005 ABC transporter FORC54_2947 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FORC54_2948 PF00580 UvrD/REP helicase N-terminal domain FORC54_2948 PF13361 UvrD-like helicase C-terminal domain FORC54_2949 PF00440 Bacterial regulatory proteins, tetR family FORC54_2950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_2951 PF00873 AcrB/AcrD/AcrF family FORC54_2952 PF04380 Membrane fusogenic activity FORC54_2953 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FORC54_2953 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FORC54_2954 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2954 PF03466 LysR substrate binding domain FORC54_2956 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_2957 PF07369 Protein of unknown function (DUF1488) FORC54_2958 PF01488 Shikimate / quinate 5-dehydrogenase FORC54_2958 PF08501 Shikimate dehydrogenase substrate binding domain FORC54_2958 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FORC54_2959 PF01218 Coproporphyrinogen III oxidase FORC54_2960 PF01300 Telomere recombination FORC54_2961 PF00731 AIR carboxylase FORC54_2962 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FORC54_2962 PF02222 ATP-grasp domain FORC54_2963 PF01396 Topoisomerase DNA binding C4 zinc finger FORC54_2964 PF04361 Protein of unknown function (DUF494) FORC54_2965 PF17782 DprA winged helix domain FORC54_2965 PF02481 DNA recombination-mediator protein A FORC54_2967 PF01327 Polypeptide deformylase FORC54_2968 PF00551 Formyl transferase FORC54_2968 PF02911 Formyl transferase, C-terminal domain FORC54_2969 PF01029 NusB family FORC54_2969 PF01189 16S rRNA methyltransferase RsmB/F FORC54_2970 PF02080 TrkA-C domain FORC54_2970 PF02254 TrkA-N domain FORC54_2971 PF02386 Cation transport protein FORC54_2972 PF03006 Haemolysin-III related FORC54_2973 PF07070 SpoOM protein FORC54_2975 PF06288 Protein of unknown function (DUF1040) FORC54_2976 PF13746 4Fe-4S dicluster domain FORC54_2976 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FORC54_2976 PF12801 4Fe-4S binding domain FORC54_2977 PF01636 Phosphotransferase enzyme family FORC54_2978 PF01323 DSBA-like thioredoxin domain FORC54_2979 PF01553 Acyltransferase FORC54_2981 PF13335 Magnesium chelatase, subunit ChlI C-terminal FORC54_2981 PF01078 Magnesium chelatase, subunit ChlI FORC54_2982 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FORC54_2982 PF00205 Thiamine pyrophosphate enzyme, central domain FORC54_2982 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FORC54_2984 PF01063 Amino-transferase class IV FORC54_2985 PF00920 Dehydratase family FORC54_2986 PF00291 Pyridoxal-phosphate dependent enzyme FORC54_2986 PF00585 C-terminal regulatory domain of Threonine dehydratase FORC54_2987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_2987 PF03466 LysR substrate binding domain FORC54_2988 PF07690 Major Facilitator Superfamily FORC54_2989 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_2990 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_2991 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_2991 PF12804 MobA-like NTP transferase domain FORC54_2992 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FORC54_2992 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FORC54_2993 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC54_2993 PF02874 ATP synthase alpha/beta family, beta-barrel domain FORC54_2994 PF00231 ATP synthase FORC54_2995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FORC54_2995 PF00306 ATP synthase alpha/beta chain, C terminal domain FORC54_2995 PF02874 ATP synthase alpha/beta family, beta-barrel domain FORC54_2996 PF00213 ATP synthase delta (OSCP) subunit FORC54_2997 PF00430 ATP synthase B/B' CF(0) FORC54_2998 PF00137 ATP synthase subunit C FORC54_2999 PF00119 ATP synthase A chain FORC54_3000 PF03899 ATP synthase I chain FORC54_3001 PF17762 HTH domain found in ParB protein FORC54_3001 PF02195 ParB-like nuclease domain FORC54_3002 PF13614 AAA domain FORC54_3003 PF02527 rRNA small subunit methyltransferase G FORC54_3004 PF13932 GidA associated domain FORC54_3004 PF01134 Glucose inhibited division protein A FORC54_3005 PF00258 Flavodoxin FORC54_3006 PF01926 50S ribosome-binding GTPase FORC54_3006 PF12631 MnmE helical domain FORC54_3006 PF10396 GTP-binding protein TrmE N-terminus FORC54_3007 PF02096 60Kd inner membrane protein FORC54_3007 PF14849 YidC periplasmic domain FORC54_3008 PF00825 Ribonuclease P FORC54_3009 PF00468 Ribosomal protein L34 FORC54_3010 PF00005 ABC transporter FORC54_3011 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3012 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_3015 PF00005 ABC transporter FORC54_3015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_3016 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_3016 PF00005 ABC transporter FORC54_3018 PF00925 GTP cyclohydrolase II FORC54_3018 PF08719 Domain of unknown function (DUF1768) FORC54_3020 PF17149 Periplasmic sensor domain found in signal transduction proteins FORC54_3020 PF00072 Response regulator receiver domain FORC54_3020 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3020 PF00672 HAMP domain FORC54_3020 PF01627 Hpt domain FORC54_3022 PF01709 Transcriptional regulator FORC54_3025 PF00005 ABC transporter FORC54_3026 PF02687 FtsX-like permease family FORC54_3026 PF12704 MacB-like periplasmic core domain FORC54_3029 PF06580 Histidine kinase FORC54_3029 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3029 PF07694 5TMR of 5TMR-LYT FORC54_3030 PF00072 Response regulator receiver domain FORC54_3030 PF04397 LytTr DNA-binding domain FORC54_3031 PF17200 Single Cache domain 2 FORC54_3031 PF00672 HAMP domain FORC54_3031 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3034 PF03616 Sodium/glutamate symporter FORC54_3035 PF03616 Sodium/glutamate symporter FORC54_3037 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FORC54_3041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3041 PF03466 LysR substrate binding domain FORC54_3043 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_3046 PF06029 AlkA N-terminal domain FORC54_3046 PF00730 HhH-GPD superfamily base excision DNA repair protein FORC54_3047 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FORC54_3047 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FORC54_3048 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FORC54_3050 PF03600 Citrate transporter FORC54_3052 PF08361 MAATS-type transcriptional repressor, C-terminal region FORC54_3052 PF00440 Bacterial regulatory proteins, tetR family FORC54_3054 PF00704 Glycosyl hydrolases family 18 FORC54_3054 PF08329 Chitinase A, N-terminal domain FORC54_3056 PF06865 Pyrimidine/purine nucleoside phosphorylase FORC54_3057 PF01609 Transposase DDE domain FORC54_3057 PF13006 Insertion element 4 transposase N-terminal FORC54_3058 PF02678 Pirin FORC54_3058 PF05726 Pirin C-terminal cupin domain FORC54_3060 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3060 PF00563 EAL domain FORC54_3061 PF17158 Membrane-associated sensor, integral membrane domain FORC54_3061 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3062 PF00128 Alpha amylase, catalytic domain FORC54_3062 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC54_3063 PF02264 LamB porin FORC54_3064 PF07148 Maltose operon periplasmic protein precursor (MalM) FORC54_3066 PF01547 Bacterial extracellular solute-binding protein FORC54_3067 PF02903 Alpha amylase, N-terminal ig-like domain FORC54_3067 PF00128 Alpha amylase, catalytic domain FORC54_3067 PF16657 Maltogenic Amylase, C-terminal domain FORC54_3069 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC54_3069 PF17967 Pullulanase N2 domain FORC54_3069 PF03714 Bacterial pullanase-associated domain FORC54_3069 PF11852 Domain of unknown function (DUF3372) FORC54_3069 PF18494 Pullulanase Ins domain FORC54_3072 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FORC54_3072 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FORC54_3072 PF01276 Orn/Lys/Arg decarboxylase, major domain FORC54_3073 PF13520 Amino acid permease FORC54_3074 PF08543 Phosphomethylpyrimidine kinase FORC54_3080 PF13545 Crp-like helix-turn-helix domain FORC54_3080 PF00027 Cyclic nucleotide-binding domain FORC54_3081 PF00375 Sodium:dicarboxylate symporter family FORC54_3082 PF03193 RsgA GTPase FORC54_3083 PF04314 Copper chaperone PCu(A)C FORC54_3084 PF02630 SCO1/SenC FORC54_3089 PF00196 Bacterial regulatory proteins, luxR family FORC54_3089 PF17874 MalT-like TPR region FORC54_3091 PF00343 Carbohydrate phosphorylase FORC54_3092 PF02446 4-alpha-glucanotransferase FORC54_3093 PF02806 Alpha amylase, C-terminal all-beta domain FORC54_3093 PF00128 Alpha amylase, catalytic domain FORC54_3093 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FORC54_3094 PF16591 Helical bimodular sensor domain FORC54_3094 PF00672 HAMP domain FORC54_3094 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3095 PF04055 Radical SAM superfamily FORC54_3095 PF00919 Uncharacterized protein family UPF0004 FORC54_3095 PF18693 TRAM domain FORC54_3096 PF01810 LysE type translocator FORC54_3097 PF01037 Lrp/AsnC ligand binding domain FORC54_3098 PF01470 Pyroglutamyl peptidase FORC54_3101 PF02661 Fic/DOC family FORC54_3103 PF00672 HAMP domain FORC54_3103 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3103 PF02743 Cache domain FORC54_3105 PF00171 Aldehyde dehydrogenase family FORC54_3106 PF02798 Glutathione S-transferase, N-terminal domain FORC54_3107 PF01966 HD domain FORC54_3108 PF02690 Na+/Pi-cotransporter FORC54_3109 PF05193 Peptidase M16 inactive domain FORC54_3109 PF00675 Insulinase (Peptidase family M16) FORC54_3111 PF03466 LysR substrate binding domain FORC54_3111 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3113 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3113 PF08521 Two-component sensor kinase N-terminal FORC54_3113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3114 PF00486 Transcriptional regulatory protein, C terminal FORC54_3114 PF00072 Response regulator receiver domain FORC54_3115 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3118 PF02264 LamB porin FORC54_3120 PF00356 Bacterial regulatory proteins, lacI family FORC54_3122 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3123 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3124 PF00232 Glycosyl hydrolase family 1 FORC54_3125 PF00005 ABC transporter FORC54_3125 PF17912 MalK OB fold domain FORC54_3126 PF00356 Bacterial regulatory proteins, lacI family FORC54_3129 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_3130 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3131 PF12911 N-terminal TM domain of oligopeptide transport permease C FORC54_3131 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3132 PF00005 ABC transporter FORC54_3132 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_3133 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_3133 PF00005 ABC transporter FORC54_3135 PF00356 Bacterial regulatory proteins, lacI family FORC54_3138 PF00722 Glycosyl hydrolases family 16 FORC54_3139 PF02264 LamB porin FORC54_3140 PF12833 Helix-turn-helix domain FORC54_3142 PF01915 Glycosyl hydrolase family 3 C-terminal domain FORC54_3142 PF00933 Glycosyl hydrolase family 3 N terminal domain FORC54_3142 PF14310 Fibronectin type III-like domain FORC54_3143 PF01554 MatE FORC54_3145 PF00529 HlyD membrane-fusion protein of T1SS FORC54_3145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_3150 PF00849 RNA pseudouridylate synthase FORC54_3151 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3151 PF03707 Bacterial signalling protein N terminal repeat FORC54_3151 PF00563 EAL domain FORC54_3152 PF00873 AcrB/AcrD/AcrF family FORC54_3155 PF00356 Bacterial regulatory proteins, lacI family FORC54_3156 PF02653 Branched-chain amino acid transport system / permease component FORC54_3157 PF00005 ABC transporter FORC54_3158 PF13407 Periplasmic binding protein domain FORC54_3159 PF02929 Beta galactosidase small chain FORC54_3159 PF16353 Domain of unknown function(DUF4981) FORC54_3159 PF00703 Glycosyl hydrolases family 2 FORC54_3159 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FORC54_3159 PF02837 Glycosyl hydrolases family 2, sugar binding domain FORC54_3161 PF16874 Glycosyl hydrolase family 36 C-terminal domain FORC54_3161 PF16875 Glycosyl hydrolase family 36 N-terminal domain FORC54_3163 PF00588 SpoU rRNA Methylase family FORC54_3163 PF08032 RNA 2'-O ribose methyltransferase substrate binding FORC54_3164 PF11953 Domain of unknown function (DUF3470) FORC54_3164 PF00037 4Fe-4S binding domain FORC54_3167 PF00392 Bacterial regulatory proteins, gntR family FORC54_3167 PF07702 UTRA domain FORC54_3168 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_3168 PF02378 Phosphotransferase system, EIIC FORC54_3168 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_3169 PF07748 Glycosyl hydrolases family 38 C-terminal domain FORC54_3169 PF09261 Alpha mannosidase middle domain FORC54_3169 PF01074 Glycosyl hydrolases family 38 N-terminal domain FORC54_3170 PF02595 Glycerate kinase family FORC54_3171 PF01238 Phosphomannose isomerase type I FORC54_3172 PF00593 TonB dependent receptor FORC54_3172 PF07715 TonB-dependent Receptor Plug Domain FORC54_3173 PF12833 Helix-turn-helix domain FORC54_3179 PF01238 Phosphomannose isomerase type I FORC54_3180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_3180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_3180 PF02378 Phosphotransferase system, EIIC FORC54_3181 PF12833 Helix-turn-helix domain FORC54_3183 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_3186 PF17678 Glycosyl hydrolase family 92 N-terminal domain FORC54_3186 PF07971 Glycosyl hydrolase family 92 FORC54_3187 PF17678 Glycosyl hydrolase family 92 N-terminal domain FORC54_3187 PF07971 Glycosyl hydrolase family 92 FORC54_3189 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_3189 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_3192 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FORC54_3192 PF01568 Molydopterin dinucleotide binding domain FORC54_3192 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC54_3192 PF12838 4Fe-4S dicluster domain FORC54_3192 PF00384 Molybdopterin oxidoreductase FORC54_3194 PF00356 Bacterial regulatory proteins, lacI family FORC54_3194 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC54_3195 PF02378 Phosphotransferase system, EIIC FORC54_3195 PF00367 phosphotransferase system, EIIB FORC54_3196 PF00155 Aminotransferase class I and II FORC54_3197 PF01238 Phosphomannose isomerase type I FORC54_3198 PF01048 Phosphorylase superfamily FORC54_3199 PF03466 LysR substrate binding domain FORC54_3199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3200 PF08453 Peptidase family M9 N-terminal FORC54_3200 PF01752 Collagenase FORC54_3200 PF04151 Bacterial pre-peptidase C-terminal domain FORC54_3205 PF04973 Nicotinamide mononucleotide transporter FORC54_3206 PF01048 Phosphorylase superfamily FORC54_3210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3210 PF03466 LysR substrate binding domain FORC54_3213 PF00764 Arginosuccinate synthase FORC54_3214 PF03466 LysR substrate binding domain FORC54_3214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3215 PF00375 Sodium:dicarboxylate symporter family FORC54_3221 PF03466 LysR substrate binding domain FORC54_3221 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3223 PF00881 Nitroreductase family FORC54_3224 PF05958 tRNA (Uracil-5-)-methyltransferase FORC54_3225 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FORC54_3232 PF00155 Aminotransferase class I and II FORC54_3232 PF00392 Bacterial regulatory proteins, gntR family FORC54_3234 PF17158 Membrane-associated sensor, integral membrane domain FORC54_3234 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3237 PF04231 Endonuclease I FORC54_3238 PF16657 Maltogenic Amylase, C-terminal domain FORC54_3238 PF02903 Alpha amylase, N-terminal ig-like domain FORC54_3238 PF00128 Alpha amylase, catalytic domain FORC54_3240 PF00884 Sulfatase FORC54_3241 PF08019 Phosphoethanolamine transferase EptA/EptB FORC54_3241 PF00884 Sulfatase FORC54_3242 PF01219 Prokaryotic diacylglycerol kinase FORC54_3243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3243 PF00672 HAMP domain FORC54_3243 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3244 PF00072 Response regulator receiver domain FORC54_3244 PF00486 Transcriptional regulatory protein, C terminal FORC54_3247 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3247 PF03466 LysR substrate binding domain FORC54_3248 PF00106 short chain dehydrogenase FORC54_3249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3249 PF03466 LysR substrate binding domain FORC54_3253 PF01323 DSBA-like thioredoxin domain FORC54_3254 PF00282 Pyridoxal-dependent decarboxylase conserved domain FORC54_3260 PF01569 PAP2 superfamily FORC54_3261 PF08543 Phosphomethylpyrimidine kinase FORC54_3262 PF04013 Putative SAM-dependent RNA methyltransferase FORC54_3265 PF10928 Protein of unknown function (DUF2810) FORC54_3267 PF07690 Major Facilitator Superfamily FORC54_3271 PF13416 Bacterial extracellular solute-binding protein FORC54_3272 PF00593 TonB dependent receptor FORC54_3272 PF07715 TonB-dependent Receptor Plug Domain FORC54_3274 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3274 PF00563 EAL domain FORC54_3274 PF03707 Bacterial signalling protein N terminal repeat FORC54_3276 PF01906 Putative heavy-metal-binding FORC54_3277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3277 PF03466 LysR substrate binding domain FORC54_3279 PF01966 HD domain FORC54_3283 PF00080 Copper/zinc superoxide dismutase (SODC) FORC54_3285 PF06628 Catalase-related immune-responsive FORC54_3285 PF00199 Catalase FORC54_3289 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FORC54_3290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3290 PF03466 LysR substrate binding domain FORC54_3291 PF07690 Major Facilitator Superfamily FORC54_3294 PF00657 GDSL-like Lipase/Acylhydrolase FORC54_3295 PF00155 Aminotransferase class I and II FORC54_3296 PF08240 Alcohol dehydrogenase GroES-like domain FORC54_3296 PF00107 Zinc-binding dehydrogenase FORC54_3304 PF06508 Queuosine biosynthesis protein QueC FORC54_3306 PF09669 Phage regulatory protein Rha (Phage_pRha) FORC54_3306 PF10549 ORF11CD3 domain FORC54_3308 PF00589 Phage integrase family FORC54_3308 PF12167 Arm DNA-binding domain FORC54_3316 PF00717 Peptidase S24-like FORC54_3316 PF01381 Helix-turn-helix FORC54_3321 PF03354 Phage Terminase FORC54_3327 PF06147 Protein of unknown function (DUF968) FORC54_3329 PF01171 PP-loop family FORC54_3336 PF00959 Phage lysozyme FORC54_3342 PF01972 Serine dehydrogenase proteinase FORC54_3342 PF01957 NfeD-like C-terminal, partner-binding FORC54_3344 PF03864 Phage major capsid protein E FORC54_3360 PF08240 Alcohol dehydrogenase GroES-like domain FORC54_3360 PF00107 Zinc-binding dehydrogenase FORC54_3369 PF08212 Lipocalin-like domain FORC54_3372 PF03466 LysR substrate binding domain FORC54_3372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3375 PF13737 Transposase DDE domain FORC54_3376 PF02371 Transposase IS116/IS110/IS902 family FORC54_3376 PF01548 Transposase FORC54_3377 PF04076 Bacterial OB fold (BOF) protein FORC54_3379 PF00664 ABC transporter transmembrane region FORC54_3379 PF00005 ABC transporter FORC54_3379 PF03412 Peptidase C39 family FORC54_3380 PF00529 HlyD membrane-fusion protein of T1SS FORC54_3381 PF02321 Outer membrane efflux protein FORC54_3384 PF00194 Eukaryotic-type carbonic anhydrase FORC54_3385 PF00924 Mechanosensitive ion channel FORC54_3387 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3387 PF00672 HAMP domain FORC54_3388 PF07238 PilZ domain FORC54_3388 PF12945 Flagellar protein YcgR FORC54_3390 PF13302 Acetyltransferase (GNAT) domain FORC54_3391 PF14684 Tricorn protease C1 domain FORC54_3391 PF14685 Tricorn protease PDZ domain FORC54_3391 PF03572 Peptidase family S41 FORC54_3391 PF07676 WD40-like Beta Propeller Repeat FORC54_3394 PF12558 ATP-binding cassette cobalt transporter FORC54_3394 PF00005 ABC transporter FORC54_3395 PF07155 ECF-type riboflavin transporter, S component FORC54_3396 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_3396 PF00529 HlyD membrane-fusion protein of T1SS FORC54_3397 PF11742 Protein of unknown function (DUF3302) FORC54_3398 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3401 PF01048 Phosphorylase superfamily FORC54_3402 PF08349 Protein of unknown function (DUF1722) FORC54_3403 PF13411 MerR HTH family regulatory protein FORC54_3404 PF00875 DNA photolyase FORC54_3404 PF03441 FAD binding domain of DNA photolyase FORC54_3405 PF01476 LysM domain FORC54_3405 PF03734 L,D-transpeptidase catalytic domain FORC54_3405 PF17969 L,D-transpeptidase C-terminal domain FORC54_3407 PF00270 DEAD/DEAH box helicase FORC54_3407 PF00271 Helicase conserved C-terminal domain FORC54_3408 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FORC54_3408 PF00326 Prolyl oligopeptidase family FORC54_3409 PF00593 TonB dependent receptor FORC54_3409 PF07715 TonB-dependent Receptor Plug Domain FORC54_3409 PF04886 PT repeat FORC54_3413 PF12729 Four helix bundle sensory module for signal transduction FORC54_3413 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3413 PF00672 HAMP domain FORC54_3415 PF12849 PBP superfamily domain FORC54_3416 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3417 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3418 PF00005 ABC transporter FORC54_3419 PF01590 GAF domain FORC54_3419 PF00563 EAL domain FORC54_3419 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3419 PF00360 Phytochrome region FORC54_3421 PF07584 Aerotolerance regulator N-terminal FORC54_3421 PF00092 von Willebrand factor type A domain FORC54_3424 PF01882 Protein of unknown function DUF58 FORC54_3425 PF17863 AAA lid domain FORC54_3425 PF07726 ATPase family associated with various cellular activities (AAA) FORC54_3426 PF00672 HAMP domain FORC54_3426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3426 PF02743 Cache domain FORC54_3428 PF00196 Bacterial regulatory proteins, luxR family FORC54_3429 PF00196 Bacterial regulatory proteins, luxR family FORC54_3431 PF00664 ABC transporter transmembrane region FORC54_3431 PF00005 ABC transporter FORC54_3432 PF00529 HlyD membrane-fusion protein of T1SS FORC54_3435 PF13439 Glycosyltransferase Family 4 FORC54_3435 PF00534 Glycosyl transferases group 1 FORC54_3437 PF00534 Glycosyl transferases group 1 FORC54_3437 PF13439 Glycosyltransferase Family 4 FORC54_3438 PF02706 Chain length determinant protein FORC54_3438 PF13807 G-rich domain on putative tyrosine kinase FORC54_3438 PF13614 AAA domain FORC54_3439 PF02563 Polysaccharide biosynthesis/export protein FORC54_3439 PF10531 SLBB domain FORC54_3441 PF02397 Bacterial sugar transferase FORC54_3442 PF00005 ABC transporter FORC54_3442 PF08402 TOBE domain FORC54_3444 PF01547 Bacterial extracellular solute-binding protein FORC54_3445 PF14785 Maltose transport system permease protein MalF P2 domain FORC54_3445 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3446 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3452 PF05661 Protein of unknown function (DUF808) FORC54_3453 PF17151 Periplasmic sensor domain FORC54_3453 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3454 PF01979 Amidohydrolase family FORC54_3455 PF03476 MOSC N-terminal beta barrel domain FORC54_3455 PF03473 MOSC domain FORC54_3455 PF03473 MOSC domain FORC54_3455 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_3455 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_3455 PF03476 MOSC N-terminal beta barrel domain FORC54_3456 PF02540 NAD synthase FORC54_3465 PF00005 ABC transporter FORC54_3466 PF01032 FecCD transport family FORC54_3468 PF02472 Biopolymer transport protein ExbD/TolR FORC54_3469 PF01618 MotA/TolQ/ExbB proton channel family FORC54_3470 PF03544 Gram-negative bacterial TonB protein C-terminal FORC54_3472 PF04055 Radical SAM superfamily FORC54_3473 PF06228 Haem utilisation ChuX/HutX FORC54_3474 PF01243 Pyridoxamine 5'-phosphate oxidase FORC54_3476 PF00072 Response regulator receiver domain FORC54_3476 PF01584 CheW-like domain FORC54_3478 PF00582 Universal stress protein family FORC54_3479 PF00128 Alpha amylase, catalytic domain FORC54_3480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3480 PF02743 Cache domain FORC54_3480 PF00672 HAMP domain FORC54_3481 PF02743 Cache domain FORC54_3481 PF00672 HAMP domain FORC54_3481 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3489 PF01476 LysM domain FORC54_3489 PF08525 Opacity-associated protein A N-terminal motif FORC54_3489 PF01551 Peptidase family M23 FORC54_3490 PF13419 Haloacid dehalogenase-like hydrolase FORC54_3493 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FORC54_3493 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FORC54_3497 PF07670 Nucleoside recognition FORC54_3497 PF01773 Na+ dependent nucleoside transporter N-terminus FORC54_3497 PF07662 Na+ dependent nucleoside transporter C-terminus FORC54_3500 PF00563 EAL domain FORC54_3500 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3500 PF03707 Bacterial signalling protein N terminal repeat FORC54_3501 PF12729 Four helix bundle sensory module for signal transduction FORC54_3501 PF00672 HAMP domain FORC54_3501 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3504 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3505 PF01625 Peptide methionine sulfoxide reductase FORC54_3505 PF01641 SelR domain FORC54_3506 PF02566 OsmC-like protein FORC54_3507 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FORC54_3507 PF14602 Hexapeptide repeat of succinyl-transferase FORC54_3507 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_3510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3510 PF03466 LysR substrate binding domain FORC54_3511 PF13419 Haloacid dehalogenase-like hydrolase FORC54_3514 PF00672 HAMP domain FORC54_3514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3516 PF00155 Aminotransferase class I and II FORC54_3517 PF01497 Periplasmic binding protein FORC54_3517 PF12833 Helix-turn-helix domain FORC54_3518 PF13419 Haloacid dehalogenase-like hydrolase FORC54_3520 PF00266 Aminotransferase class-V FORC54_3527 PF00005 ABC transporter FORC54_3529 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3530 PF07702 UTRA domain FORC54_3530 PF00392 Bacterial regulatory proteins, gntR family FORC54_3532 PF01266 FAD dependent oxidoreductase FORC54_3533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3533 PF03466 LysR substrate binding domain FORC54_3535 PF00854 POT family FORC54_3536 PF03313 Serine dehydratase alpha chain FORC54_3536 PF03315 Serine dehydratase beta chain FORC54_3540 PF07943 Penicillin-binding protein 5, C-terminal domain FORC54_3540 PF00768 D-alanyl-D-alanine carboxypeptidase FORC54_3545 PF13977 BetI-type transcriptional repressor, C-terminal FORC54_3545 PF00440 Bacterial regulatory proteins, tetR family FORC54_3546 PF00171 Aldehyde dehydrogenase family FORC54_3547 PF00732 GMC oxidoreductase FORC54_3547 PF05199 GMC oxidoreductase FORC54_3548 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FORC54_3549 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3550 PF00571 CBS domain FORC54_3550 PF00005 ABC transporter FORC54_3551 PF04224 Protein of unknown function, DUF417 FORC54_3552 PF00391 PEP-utilising enzyme, mobile domain FORC54_3552 PF02896 PEP-utilising enzyme, TIM barrel domain FORC54_3552 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FORC54_3553 PF03618 Kinase/pyrophosphorylase FORC54_3557 PF01266 FAD dependent oxidoreductase FORC54_3557 PF04324 BFD-like [2Fe-2S] binding domain FORC54_3558 PF00890 FAD binding domain FORC54_3559 PF13183 4Fe-4S dicluster domain FORC54_3559 PF02754 Cysteine-rich domain FORC54_3562 PF02016 LD-carboxypeptidase N-terminal domain FORC54_3562 PF17676 LD-carboxypeptidase C-terminal domain FORC54_3563 PF07995 Glucose / Sorbosone dehydrogenase FORC54_3565 PF00465 Iron-containing alcohol dehydrogenase FORC54_3566 PF00012 Hsp70 protein FORC54_3567 PF00581 Rhodanese-like domain FORC54_3572 PF13533 Biotin-lipoyl like FORC54_3573 PF00873 AcrB/AcrD/AcrF family FORC54_3574 PF13194 Domain of unknown function (DUF4010) FORC54_3575 PF01447 Thermolysin metallopeptidase, catalytic domain FORC54_3575 PF03413 Peptidase propeptide and YPEB domain FORC54_3575 PF07504 Fungalysin/Thermolysin Propeptide Motif FORC54_3575 PF02868 Thermolysin metallopeptidase, alpha-helical domain FORC54_3579 PF03222 Tryptophan/tyrosine permease family FORC54_3580 PF00149 Calcineurin-like phosphoesterase FORC54_3582 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3582 PF02743 Cache domain FORC54_3582 PF00672 HAMP domain FORC54_3584 PF18416 N-acetylglucosamine binding protein domain 2 FORC54_3584 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FORC54_3585 PF00892 EamA-like transporter family FORC54_3588 PF01569 PAP2 superfamily FORC54_3590 PF03606 C4-dicarboxylate anaerobic carrier FORC54_3591 PF00171 Aldehyde dehydrogenase family FORC54_3592 PF00034 Cytochrome c FORC54_3593 PF01212 Beta-eliminating lyase FORC54_3595 PF17868 AAA lid domain FORC54_3595 PF07728 AAA domain (dynein-related subfamily) FORC54_3595 PF12592 Protein of unknown function (DUF3763) FORC54_3596 PF05762 VWA domain containing CoxE-like protein FORC54_3597 PF04237 YjbR FORC54_3600 PF05025 RbsD / FucU transport protein family FORC54_3601 PF00005 ABC transporter FORC54_3602 PF02653 Branched-chain amino acid transport system / permease component FORC54_3603 PF13407 Periplasmic binding protein domain FORC54_3604 PF00294 pfkB family carbohydrate kinase FORC54_3605 PF00356 Bacterial regulatory proteins, lacI family FORC54_3607 PF01584 CheW-like domain FORC54_3607 PF00072 Response regulator receiver domain FORC54_3609 PF00583 Acetyltransferase (GNAT) family FORC54_3610 PF01926 50S ribosome-binding GTPase FORC54_3611 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3611 PF12729 Four helix bundle sensory module for signal transduction FORC54_3611 PF00672 HAMP domain FORC54_3613 PF00149 Calcineurin-like phosphoesterase FORC54_3613 PF12320 Type 5 capsule protein repressor C-terminal domain FORC54_3614 PF13476 AAA domain FORC54_3616 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3616 PF03466 LysR substrate binding domain FORC54_3620 PF04972 BON domain FORC54_3620 PF00263 Bacterial type II and III secretion system protein FORC54_3620 PF13629 Pilus formation protein N terminal region FORC54_3623 PF00437 Type II/IV secretion system protein FORC54_3636 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3636 PF00672 HAMP domain FORC54_3636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3637 PF00072 Response regulator receiver domain FORC54_3637 PF12431 Transcriptional regulator FORC54_3638 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_3638 PF12464 Maltose acetyltransferase FORC54_3644 PF01032 FecCD transport family FORC54_3645 PF01032 FecCD transport family FORC54_3646 PF00005 ABC transporter FORC54_3647 PF13411 MerR HTH family regulatory protein FORC54_3654 PF12805 FUSC-like inner membrane protein yccS FORC54_3655 PF13361 UvrD-like helicase C-terminal domain FORC54_3655 PF12462 DNA helicase IV / RNA helicase N terminal FORC54_3655 PF00580 UvrD/REP helicase N-terminal domain FORC54_3656 PF02142 MGS-like domain FORC54_3657 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC54_3658 PF00072 Response regulator receiver domain FORC54_3658 PF01627 Hpt domain FORC54_3658 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3658 PF17149 Periplasmic sensor domain found in signal transduction proteins FORC54_3658 PF00672 HAMP domain FORC54_3658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3662 PF03781 Sulfatase-modifying factor enzyme 1 FORC54_3663 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC54_3666 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FORC54_3667 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB FORC54_3668 PF00271 Helicase conserved C-terminal domain FORC54_3668 PF00270 DEAD/DEAH box helicase FORC54_3668 PF03880 DbpA RNA binding domain FORC54_3669 PF09456 RcsC Alpha-Beta-Loop (ABL) FORC54_3669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3669 PF00072 Response regulator receiver domain FORC54_3669 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3670 PF00563 EAL domain FORC54_3670 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3670 PF00498 FHA domain FORC54_3673 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3673 PF03707 Bacterial signalling protein N terminal repeat FORC54_3673 PF00563 EAL domain FORC54_3675 PF12849 PBP superfamily domain FORC54_3677 PF12833 Helix-turn-helix domain FORC54_3678 PF08206 Ribonuclease B OB domain FORC54_3678 PF00773 RNB domain FORC54_3678 PF00575 S1 RNA binding domain FORC54_3679 PF03880 DbpA RNA binding domain FORC54_3679 PF00270 DEAD/DEAH box helicase FORC54_3679 PF00271 Helicase conserved C-terminal domain FORC54_3680 PF00871 Acetokinase family FORC54_3681 PF00884 Sulfatase FORC54_3683 PF04055 Radical SAM superfamily FORC54_3683 PF13186 Iron-sulfur cluster-binding domain FORC54_3684 PF04055 Radical SAM superfamily FORC54_3684 PF13186 Iron-sulfur cluster-binding domain FORC54_3685 PF17863 AAA lid domain FORC54_3685 PF07726 ATPase family associated with various cellular activities (AAA) FORC54_3688 PF00092 von Willebrand factor type A domain FORC54_3692 PF03466 LysR substrate binding domain FORC54_3692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3693 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase FORC54_3694 PF03781 Sulfatase-modifying factor enzyme 1 FORC54_3695 PF04055 Radical SAM superfamily FORC54_3695 PF13186 Iron-sulfur cluster-binding domain FORC54_3697 PF18081 Fanconi anemia-associated nuclease SAP domain FORC54_3697 PF08774 VRR-NUC domain FORC54_3701 PF07690 Major Facilitator Superfamily FORC54_3702 PF13533 Biotin-lipoyl like FORC54_3709 PF00795 Carbon-nitrogen hydrolase FORC54_3712 PF00005 ABC transporter FORC54_3712 PF00664 ABC transporter transmembrane region FORC54_3716 PF13361 UvrD-like helicase C-terminal domain FORC54_3716 PF00580 UvrD/REP helicase N-terminal domain FORC54_3718 PF00665 Integrase core domain FORC54_3719 PF01527 Transposase FORC54_3723 PF17866 AAA lid domain FORC54_3723 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_3724 PF02347 Glycine cleavage system P-protein FORC54_3725 PF01597 Glycine cleavage H-protein FORC54_3726 PF00464 Serine hydroxymethyltransferase FORC54_3728 PF08669 Glycine cleavage T-protein C-terminal barrel domain FORC54_3728 PF01571 Aminomethyltransferase folate-binding domain FORC54_3733 PF00873 AcrB/AcrD/AcrF family FORC54_3735 PF02378 Phosphotransferase system, EIIC FORC54_3735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FORC54_3736 PF00294 pfkB family carbohydrate kinase FORC54_3737 PF00381 PTS HPr component phosphorylation site FORC54_3737 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_3738 PF00356 Bacterial regulatory proteins, lacI family FORC54_3738 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FORC54_3743 PF00224 Pyruvate kinase, barrel domain FORC54_3743 PF02887 Pyruvate kinase, alpha/beta domain FORC54_3744 PF07690 Major Facilitator Superfamily FORC54_3746 PF02743 Cache domain FORC54_3746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3746 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3747 PF00072 Response regulator receiver domain FORC54_3747 PF02954 Bacterial regulatory protein, Fis family FORC54_3747 PF14532 Sigma-54 interaction domain FORC54_3748 PF00465 Iron-containing alcohol dehydrogenase FORC54_3749 PF12833 Helix-turn-helix domain FORC54_3749 PF06719 AraC-type transcriptional regulator N-terminus FORC54_3750 PF06483 Chitinase C FORC54_3750 PF00704 Glycosyl hydrolases family 18 FORC54_3751 PF00483 Nucleotidyl transferase FORC54_3752 PF01268 Formate--tetrahydrofolate ligase FORC54_3753 PF00294 pfkB family carbohydrate kinase FORC54_3756 PF11849 Domain of unknown function (DUF3369) FORC54_3757 PF13419 Haloacid dehalogenase-like hydrolase FORC54_3758 PF00672 HAMP domain FORC54_3758 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3759 PF04336 Acyl carrier protein phosphodiesterase FORC54_3760 PF00270 DEAD/DEAH box helicase FORC54_3760 PF00271 Helicase conserved C-terminal domain FORC54_3763 PF01292 Prokaryotic cytochrome b561 FORC54_3764 PF04264 YceI-like domain FORC54_3765 PF01226 Formate/nitrite transporter FORC54_3766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3766 PF03466 LysR substrate binding domain FORC54_3767 PF06496 Protein of unknown function (DUF1097) FORC54_3768 PF11398 Protein of unknown function (DUF2813) FORC54_3769 PF02872 5'-nucleotidase, C-terminal domain FORC54_3769 PF00149 Calcineurin-like phosphoesterase FORC54_3770 PF03741 Integral membrane protein TerC family FORC54_3772 PF00892 EamA-like transporter family FORC54_3773 PF00491 Arginase family FORC54_3776 PF12262 Bacterial virulence factor lipase N-terminal FORC54_3777 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FORC54_3780 PF03061 Thioesterase superfamily FORC54_3782 PF12793 Sugar transport-related sRNA regulator N-term FORC54_3782 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FORC54_3784 PF00128 Alpha amylase, catalytic domain FORC54_3784 PF16657 Maltogenic Amylase, C-terminal domain FORC54_3785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3785 PF03466 LysR substrate binding domain FORC54_3789 PF00226 DnaJ domain FORC54_3789 PF01556 DnaJ C terminal domain FORC54_3789 PF00684 DnaJ central domain FORC54_3792 PF00563 EAL domain FORC54_3792 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3792 PF00498 FHA domain FORC54_3793 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FORC54_3793 PF07055 Enoyl reductase FAD binding domain FORC54_3793 PF12241 Trans-2-enoyl-CoA reductase catalytic region FORC54_3794 PF13472 GDSL-like Lipase/Acylhydrolase family FORC54_3795 PF00005 ABC transporter FORC54_3797 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FORC54_3797 PF01266 FAD dependent oxidoreductase FORC54_3798 PF02626 Carboxyltransferase domain, subdomain A and B FORC54_3799 PF02682 Carboxyltransferase domain, subdomain C and D FORC54_3800 PF03746 LamB/YcsF family FORC54_3802 PF00563 EAL domain FORC54_3802 PF08447 PAS fold FORC54_3802 PF05231 MASE1 FORC54_3802 PF13426 PAS domain FORC54_3802 PF08448 PAS fold FORC54_3802 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3803 PF04886 PT repeat FORC54_3803 PF00593 TonB dependent receptor FORC54_3803 PF07715 TonB-dependent Receptor Plug Domain FORC54_3804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3804 PF03466 LysR substrate binding domain FORC54_3805 PF00583 Acetyltransferase (GNAT) family FORC54_3805 PF13380 CoA binding domain FORC54_3805 PF13607 Succinyl-CoA ligase like flavodoxin domain FORC54_3806 PF05036 Sporulation related domain FORC54_3807 PF01820 D-ala D-ala ligase N-terminus FORC54_3807 PF07478 D-ala D-ala ligase C-terminus FORC54_3809 PF01253 Translation initiation factor SUI1 FORC54_3812 PF03701 Uncharacterised protein family (UPF0181) FORC54_3815 PF00486 Transcriptional regulatory protein, C terminal FORC54_3815 PF00072 Response regulator receiver domain FORC54_3817 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_3818 PF02233 NAD(P) transhydrogenase beta subunit FORC54_3819 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FORC54_3819 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FORC54_3819 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FORC54_3822 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3824 PF00072 Response regulator receiver domain FORC54_3824 PF00486 Transcriptional regulatory protein, C terminal FORC54_3826 PF01047 MarR family FORC54_3827 PF00892 EamA-like transporter family FORC54_3828 PF00005 ABC transporter FORC54_3828 PF03459 TOBE domain FORC54_3829 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3831 PF07685 CobB/CobQ-like glutamine amidotransferase domain FORC54_3831 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FORC54_3834 PF08443 RimK-like ATP-grasp domain FORC54_3834 PF18030 RimK PreATP-grasp domain FORC54_3835 PF00155 Aminotransferase class I and II FORC54_3837 PF03477 ATP cone domain FORC54_3837 PF13597 Anaerobic ribonucleoside-triphosphate reductase FORC54_3839 PF00873 AcrB/AcrD/AcrF family FORC54_3842 PF04143 Sulphur transport FORC54_3845 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_3845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FORC54_3848 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FORC54_3848 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FORC54_3849 PF00085 Thioredoxin FORC54_3850 PF07690 Major Facilitator Superfamily FORC54_3851 PF12833 Helix-turn-helix domain FORC54_3852 PF01554 MatE FORC54_3853 PF11756 Nitrous oxide-stimulated promoter FORC54_3855 PF00672 HAMP domain FORC54_3855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3855 PF17200 Single Cache domain 2 FORC54_3856 PF03605 Anaerobic c4-dicarboxylate membrane transporter FORC54_3859 PF02472 Biopolymer transport protein ExbD/TolR FORC54_3860 PF01618 MotA/TolQ/ExbB proton channel family FORC54_3861 PF01618 MotA/TolQ/ExbB proton channel family FORC54_3865 PF14824 Sirohaem biosynthesis protein central FORC54_3865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC54_3865 PF10414 Sirohaem synthase dimerisation region FORC54_3867 PF13806 Rieske-like [2Fe-2S] domain FORC54_3868 PF04324 BFD-like [2Fe-2S] binding domain FORC54_3868 PF18267 Rubredoxin NAD+ reductase C-terminal domain FORC54_3868 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_3868 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FORC54_3868 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FORC54_3869 PF17200 Single Cache domain 2 FORC54_3869 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3869 PF00672 HAMP domain FORC54_3871 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_3873 PF00072 Response regulator receiver domain FORC54_3873 PF01627 Hpt domain FORC54_3873 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3873 PF00672 HAMP domain FORC54_3873 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC54_3874 PF03705 CheR methyltransferase, all-alpha domain FORC54_3874 PF01739 CheR methyltransferase, SAM binding domain FORC54_3875 PF01339 CheB methylesterase FORC54_3876 PF00563 EAL domain FORC54_3876 PF00360 Phytochrome region FORC54_3876 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3876 PF01590 GAF domain FORC54_3878 PF00491 Arginase family FORC54_3879 PF00271 Helicase conserved C-terminal domain FORC54_3879 PF00270 DEAD/DEAH box helicase FORC54_3882 PF02492 CobW/HypB/UreG, nucleotide-binding domain FORC54_3882 PF07683 Cobalamin synthesis protein cobW C-terminal domain FORC54_3884 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3887 PF13806 Rieske-like [2Fe-2S] domain FORC54_3887 PF18267 Rubredoxin NAD+ reductase C-terminal domain FORC54_3887 PF04324 BFD-like [2Fe-2S] binding domain FORC54_3887 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FORC54_3887 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FORC54_3887 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_3888 PF00005 ABC transporter FORC54_3889 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_3890 PF00005 ABC transporter FORC54_3891 PF08376 Nitrate and nitrite sensing FORC54_3891 PF03861 ANTAR domain FORC54_3892 PF01738 Dienelactone hydrolase family FORC54_3893 PF02885 Glycosyl transferase family, helical bundle domain FORC54_3893 PF00591 Glycosyl transferase family, a/b domain FORC54_3894 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FORC54_3894 PF10414 Sirohaem synthase dimerisation region FORC54_3894 PF14824 Sirohaem biosynthesis protein central FORC54_3895 PF00384 Molybdopterin oxidoreductase FORC54_3895 PF04324 BFD-like [2Fe-2S] binding domain FORC54_3895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC54_3895 PF01568 Molydopterin dinucleotide binding domain FORC54_3898 PF00128 Alpha amylase, catalytic domain FORC54_3899 PF00672 HAMP domain FORC54_3899 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3900 PF00672 HAMP domain FORC54_3900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3902 PF07968 Leukocidin/Hemolysin toxin family FORC54_3902 PF00652 Ricin-type beta-trefoil lectin domain FORC54_3903 PF07690 Major Facilitator Superfamily FORC54_3904 PF03009 Glycerophosphoryl diester phosphodiesterase family FORC54_3905 PF01523 Putative modulator of DNA gyrase FORC54_3906 PF01523 Putative modulator of DNA gyrase FORC54_3907 PF07963 Prokaryotic N-terminal methylation motif FORC54_3907 PF08334 Type II secretion system (T2SS), protein G FORC54_3908 PF03606 C4-dicarboxylate anaerobic carrier FORC54_3909 PF04011 LemA family FORC54_3910 PF01435 Peptidase family M48 FORC54_3914 PF03527 RHS protein FORC54_3916 PF03527 RHS protein FORC54_3919 PF04717 Type VI secretion system, phage-baseplate injector FORC54_3919 PF16671 Actin cross-linking domain FORC54_3922 PF07724 AAA domain (Cdc48 subfamily) FORC54_3922 PF00004 ATPase family associated with various cellular activities (AAA) FORC54_3922 PF10431 C-terminal, D2-small domain, of ClpB protein FORC54_3922 PF17871 AAA lid domain FORC54_3934 PF13677 Membrane MotB of proton-channel complex MotA/MotB FORC54_3934 PF00691 OmpA family FORC54_3938 PF03793 PASTA domain FORC54_3938 PF00069 Protein kinase domain FORC54_3942 PF12843 Putative quorum-sensing-regulated virulence factor FORC54_3945 PF00990 Diguanylate cyclase, GGDEF domain FORC54_3945 PF00563 EAL domain FORC54_3945 PF03707 Bacterial signalling protein N terminal repeat FORC54_3946 PF01329 Pterin 4 alpha carbinolamine dehydratase FORC54_3947 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FORC54_3948 PF13193 AMP-binding enzyme C-terminal domain FORC54_3948 PF00501 AMP-binding enzyme FORC54_3950 PF03466 LysR substrate binding domain FORC54_3950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_3952 PF00892 EamA-like transporter family FORC54_3956 PF00512 His Kinase A (phospho-acceptor) domain FORC54_3956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_3956 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_3957 PF11849 Domain of unknown function (DUF3369) FORC54_3959 PF00962 Adenosine/AMP deaminase FORC54_3960 PF00676 Dehydrogenase E1 component FORC54_3961 PF02780 Transketolase, C-terminal domain FORC54_3961 PF02779 Transketolase, pyrimidine binding domain FORC54_3962 PF00364 Biotin-requiring enzyme FORC54_3962 PF02817 e3 binding domain FORC54_3962 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FORC54_3963 PF01012 Electron transfer flavoprotein domain FORC54_3963 PF00766 Electron transfer flavoprotein FAD-binding domain FORC54_3964 PF01012 Electron transfer flavoprotein domain FORC54_3967 PF00672 HAMP domain FORC54_3967 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_3968 PF01168 Alanine racemase, N-terminal domain FORC54_3968 PF00842 Alanine racemase, C-terminal domain FORC54_3969 PF12146 Serine aminopeptidase, S33 FORC54_3969 PF11647 Membrane Localization Domain FORC54_3969 PF07634 RtxA repeat FORC54_3969 PF11713 Peptidase C80 family FORC54_3969 PF16671 Actin cross-linking domain FORC54_3970 PF02794 RTX toxin acyltransferase family FORC54_3972 PF03412 Peptidase C39 family FORC54_3972 PF00005 ABC transporter FORC54_3972 PF00664 ABC transporter transmembrane region FORC54_3974 PF03412 Peptidase C39 family FORC54_3974 PF00664 ABC transporter transmembrane region FORC54_3974 PF00005 ABC transporter FORC54_3977 PF09722 Protein of unknown function (DUF2384) FORC54_3980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FORC54_3980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FORC54_3981 PF00378 Enoyl-CoA hydratase/isomerase FORC54_3982 PF00378 Enoyl-CoA hydratase/isomerase FORC54_3984 PF00171 Aldehyde dehydrogenase family FORC54_3985 PF00108 Thiolase, N-terminal domain FORC54_3985 PF02803 Thiolase, C-terminal domain FORC54_3986 PF09278 MerR, DNA binding FORC54_3986 PF00376 MerR family regulatory protein FORC54_3987 PF02770 Acyl-CoA dehydrogenase, middle domain FORC54_3987 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FORC54_3987 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FORC54_3988 PF01039 Carboxyl transferase domain FORC54_3989 PF00378 Enoyl-CoA hydratase/isomerase FORC54_3990 PF00682 HMGL-like FORC54_3991 PF00578 AhpC/TSA family FORC54_3991 PF10417 C-terminal domain of 1-Cys peroxiredoxin FORC54_3992 PF13192 Thioredoxin domain FORC54_3992 PF07992 Pyridine nucleotide-disulphide oxidoreductase FORC54_3993 PF00313 'Cold-shock' DNA-binding domain FORC54_3995 PF01699 Sodium/calcium exchanger protein FORC54_3996 PF00440 Bacterial regulatory proteins, tetR family FORC54_3996 PF16925 Tetracyclin repressor-like, C-terminal domain FORC54_3997 PF16884 N-terminal domain of oxidoreductase FORC54_3997 PF00107 Zinc-binding dehydrogenase FORC54_4000 PF07690 Major Facilitator Superfamily FORC54_4001 PF00196 Bacterial regulatory proteins, luxR family FORC54_4001 PF00072 Response regulator receiver domain FORC54_4002 PF05231 MASE1 FORC54_4002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4002 PF07730 Histidine kinase FORC54_4003 PF07690 Major Facilitator Superfamily FORC54_4004 PF01238 Phosphomannose isomerase type I FORC54_4005 PF00563 EAL domain FORC54_4005 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4005 PF13426 PAS domain FORC54_4007 PF03889 Alternative ribosome-rescue factor A FORC54_4008 PF00313 'Cold-shock' DNA-binding domain FORC54_4014 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FORC54_4014 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FORC54_4015 PF13419 Haloacid dehalogenase-like hydrolase FORC54_4016 PF12729 Four helix bundle sensory module for signal transduction FORC54_4016 PF00672 HAMP domain FORC54_4016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4017 PF00873 AcrB/AcrD/AcrF family FORC54_4018 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_4019 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FORC54_4020 PF01546 Peptidase family M20/M25/M40 FORC54_4020 PF07687 Peptidase dimerisation domain FORC54_4022 PF00248 Aldo/keto reductase family FORC54_4025 PF00654 Voltage gated chloride channel FORC54_4027 PF01227 GTP cyclohydrolase I FORC54_4028 PF03454 MoeA C-terminal region (domain IV) FORC54_4028 PF03453 MoeA N-terminal region (domain I and II) FORC54_4028 PF00994 Probable molybdopterin binding domain FORC54_4029 PF00899 ThiF family FORC54_4030 PF00581 Rhodanese-like domain FORC54_4031 PF00563 EAL domain FORC54_4031 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4031 PF03707 Bacterial signalling protein N terminal repeat FORC54_4032 PF00704 Glycosyl hydrolases family 18 FORC54_4032 PF08329 Chitinase A, N-terminal domain FORC54_4034 PF00923 Transaldolase/Fructose-6-phosphate aldolase FORC54_4035 PF00456 Transketolase, thiamine diphosphate binding domain FORC54_4035 PF02780 Transketolase, C-terminal domain FORC54_4035 PF02779 Transketolase, pyrimidine binding domain FORC54_4037 PF03707 Bacterial signalling protein N terminal repeat FORC54_4037 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4037 PF00563 EAL domain FORC54_4038 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4038 PF08447 PAS fold FORC54_4040 PF00793 DAHP synthetase I family FORC54_4041 PF00691 OmpA family FORC54_4041 PF01389 OmpA-like transmembrane domain FORC54_4042 PF01040 UbiA prenyltransferase family FORC54_4043 PF02628 Cytochrome oxidase assembly protein FORC54_4047 PF00510 Cytochrome c oxidase subunit III FORC54_4048 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FORC54_4049 PF00115 Cytochrome C and Quinol oxidase polypeptide I FORC54_4050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FORC54_4050 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FORC54_4051 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FORC54_4051 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FORC54_4051 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FORC54_4051 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FORC54_4053 PF01810 LysE type translocator FORC54_4057 PF01557 Fumarylacetoacetate (FAA) hydrolase family FORC54_4058 PF01047 MarR family FORC54_4059 PF02566 OsmC-like protein FORC54_4062 PF00578 AhpC/TSA family FORC54_4064 PF03707 Bacterial signalling protein N terminal repeat FORC54_4064 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4064 PF00563 EAL domain FORC54_4065 PF00892 EamA-like transporter family FORC54_4066 PF00462 Glutaredoxin FORC54_4068 PF07690 Major Facilitator Superfamily FORC54_4069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4069 PF03466 LysR substrate binding domain FORC54_4070 PF01590 GAF domain FORC54_4070 PF00563 EAL domain FORC54_4070 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4070 PF00360 Phytochrome region FORC54_4071 PF01042 Endoribonuclease L-PSP FORC54_4073 PF02838 Glycosyl hydrolase family 20, domain 2 FORC54_4073 PF00728 Glycosyl hydrolase family 20, catalytic domain FORC54_4076 PF07969 Amidohydrolase family FORC54_4078 PF01418 Helix-turn-helix domain, rpiR family FORC54_4078 PF02685 Glucokinase FORC54_4078 PF01380 SIS domain FORC54_4080 PF00005 ABC transporter FORC54_4082 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FORC54_4085 PF01047 MarR family FORC54_4089 PF00271 Helicase conserved C-terminal domain FORC54_4089 PF00270 DEAD/DEAH box helicase FORC54_4091 PF00132 Bacterial transferase hexapeptide (six repeats) FORC54_4094 PF03372 Endonuclease/Exonuclease/phosphatase family FORC54_4096 PF00579 tRNA synthetases class I (W and Y) FORC54_4097 PF00583 Acetyltransferase (GNAT) family FORC54_4098 PF14760 Rnk N-terminus FORC54_4098 PF01272 Transcription elongation factor, GreA/GreB, C-term FORC54_4108 PF00478 IMP dehydrogenase / GMP reductase domain FORC54_4110 PF03853 YjeF-related protein N-terminus FORC54_4110 PF01256 Carbohydrate kinase FORC54_4114 PF00072 Response regulator receiver domain FORC54_4114 PF00196 Bacterial regulatory proteins, luxR family FORC54_4115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4115 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FORC54_4115 PF00672 HAMP domain FORC54_4115 PF07730 Histidine kinase FORC54_4116 PF12838 4Fe-4S dicluster domain FORC54_4116 PF13187 4Fe-4S dicluster domain FORC54_4118 PF01568 Molydopterin dinucleotide binding domain FORC54_4118 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FORC54_4118 PF00384 Molybdopterin oxidoreductase FORC54_4119 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FORC54_4120 PF03264 NapC/NirT cytochrome c family, N-terminal region FORC54_4121 PF07646 Kelch motif FORC54_4122 PF01344 Kelch motif FORC54_4123 PF01380 SIS domain FORC54_4123 PF01418 Helix-turn-helix domain, rpiR family FORC54_4124 PF00701 Dihydrodipicolinate synthetase family FORC54_4125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC54_4126 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FORC54_4127 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC54_4128 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FORC54_4129 PF00480 ROK family FORC54_4130 PF01979 Amidohydrolase family FORC54_4132 PF00561 alpha/beta hydrolase fold FORC54_4132 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FORC54_4134 PF00108 Thiolase, N-terminal domain FORC54_4134 PF02803 Thiolase, C-terminal domain FORC54_4135 PF00106 short chain dehydrogenase FORC54_4136 PF02355 Protein export membrane protein FORC54_4136 PF07549 SecD/SecF GG Motif FORC54_4137 PF13721 SecD export protein N-terminal TM region FORC54_4137 PF02355 Protein export membrane protein FORC54_4137 PF07549 SecD/SecF GG Motif FORC54_4142 PF01037 Lrp/AsnC ligand binding domain FORC54_4145 PF00072 Response regulator receiver domain FORC54_4145 PF09308 LuxQ, periplasmic FORC54_4145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4145 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4146 PF13407 Periplasmic binding protein domain FORC54_4149 PF01541 GIY-YIG catalytic domain FORC54_4150 PF04337 Protein of unknown function, DUF480 FORC54_4152 PF04363 Protein of unknown function (DUF496) FORC54_4153 PF01554 MatE FORC54_4154 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC54_4154 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4154 PF01627 Hpt domain FORC54_4154 PF00672 HAMP domain FORC54_4154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4154 PF00072 Response regulator receiver domain FORC54_4157 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_4157 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FORC54_4159 PF03466 LysR substrate binding domain FORC54_4159 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4161 PF00462 Glutaredoxin FORC54_4161 PF08534 Redoxin FORC54_4163 PF03466 LysR substrate binding domain FORC54_4163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4164 PF01037 Lrp/AsnC ligand binding domain FORC54_4165 PF13520 Amino acid permease FORC54_4166 PF13230 Glutamine amidotransferases class-II FORC54_4167 PF00392 Bacterial regulatory proteins, gntR family FORC54_4167 PF00155 Aminotransferase class I and II FORC54_4169 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4169 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4169 PF00672 HAMP domain FORC54_4169 PF16527 Two-component sensor protein CpxA, periplasmic domain FORC54_4170 PF00486 Transcriptional regulatory protein, C terminal FORC54_4170 PF00072 Response regulator receiver domain FORC54_4172 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FORC54_4172 PF12833 Helix-turn-helix domain FORC54_4175 PF03448 MgtE intracellular N domain FORC54_4175 PF01769 Divalent cation transporter FORC54_4175 PF00571 CBS domain FORC54_4176 PF12833 Helix-turn-helix domain FORC54_4177 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FORC54_4178 PF07969 Amidohydrolase family FORC54_4179 PF05362 Lon protease (S16) C-terminal proteolytic domain FORC54_4179 PF13654 AAA domain FORC54_4181 PF00005 ABC transporter FORC54_4181 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FORC54_4182 PF00326 Prolyl oligopeptidase family FORC54_4182 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FORC54_4183 PF03466 LysR substrate binding domain FORC54_4183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4184 PF02652 L-lactate permease FORC54_4185 PF02754 Cysteine-rich domain FORC54_4186 PF11870 Domain of unknown function (DUF3390) FORC54_4186 PF02589 LUD domain FORC54_4186 PF13183 4Fe-4S dicluster domain FORC54_4187 PF02589 LUD domain FORC54_4191 PF07690 Major Facilitator Superfamily FORC54_4196 PF02378 Phosphotransferase system, EIIC FORC54_4200 PF04170 NlpE N-terminal domain FORC54_4200 PF17185 NlpE C-terminal OB domain FORC54_4201 PF00005 ABC transporter FORC54_4202 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_4203 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_4204 PF00528 Binding-protein-dependent transport system inner membrane component FORC54_4207 PF08448 PAS fold FORC54_4207 PF00563 EAL domain FORC54_4207 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4208 PF13472 GDSL-like Lipase/Acylhydrolase family FORC54_4208 PF17996 Carbohydrate esterase 2 N-terminal FORC54_4210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4210 PF12729 Four helix bundle sensory module for signal transduction FORC54_4210 PF00672 HAMP domain FORC54_4211 PF00497 Bacterial extracellular solute-binding proteins, family 3 FORC54_4214 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FORC54_4214 PF01648 4'-phosphopantetheinyl transferase superfamily FORC54_4215 PF00668 Condensation domain FORC54_4215 PF07993 Male sterility protein FORC54_4215 PF00550 Phosphopantetheine attachment site FORC54_4215 PF00501 AMP-binding enzyme FORC54_4215 PF13193 AMP-binding enzyme C-terminal domain FORC54_4216 PF13193 AMP-binding enzyme C-terminal domain FORC54_4216 PF00501 AMP-binding enzyme FORC54_4216 PF00975 Thioesterase domain FORC54_4216 PF00668 Condensation domain FORC54_4216 PF00550 Phosphopantetheine attachment site FORC54_4217 PF00793 DAHP synthetase I family FORC54_4219 PF00425 chorismate binding enzyme FORC54_4220 PF00501 AMP-binding enzyme FORC54_4220 PF13193 AMP-binding enzyme C-terminal domain FORC54_4222 PF04954 Siderophore-interacting protein FORC54_4222 PF08021 Siderophore-interacting FAD-binding domain FORC54_4223 PF00550 Phosphopantetheine attachment site FORC54_4223 PF00857 Isochorismatase family FORC54_4225 PF13193 AMP-binding enzyme C-terminal domain FORC54_4225 PF00501 AMP-binding enzyme FORC54_4227 PF01497 Periplasmic binding protein FORC54_4228 PF07715 TonB-dependent Receptor Plug Domain FORC54_4229 PF00668 Condensation domain FORC54_4229 PF13193 AMP-binding enzyme C-terminal domain FORC54_4229 PF00501 AMP-binding enzyme FORC54_4229 PF00550 Phosphopantetheine attachment site FORC54_4229 PF00975 Thioesterase domain FORC54_4230 PF18030 RimK PreATP-grasp domain FORC54_4230 PF08443 RimK-like ATP-grasp domain FORC54_4231 PF08443 RimK-like ATP-grasp domain FORC54_4231 PF18030 RimK PreATP-grasp domain FORC54_4232 PF00753 Metallo-beta-lactamase superfamily FORC54_4235 PF00873 AcrB/AcrD/AcrF family FORC54_4237 PF01212 Beta-eliminating lyase FORC54_4238 PF03222 Tryptophan/tyrosine permease family FORC54_4239 PF16326 ABC transporter C-terminal domain FORC54_4239 PF12848 ABC transporter FORC54_4239 PF00005 ABC transporter FORC54_4240 PF00970 Oxidoreductase FAD-binding domain FORC54_4240 PF00111 2Fe-2S iron-sulfur cluster binding domain FORC54_4240 PF00175 Oxidoreductase NAD-binding domain FORC54_4241 PF00356 Bacterial regulatory proteins, lacI family FORC54_4242 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_4244 PF03611 PTS system sugar-specific permease component FORC54_4245 PF01327 Polypeptide deformylase FORC54_4252 PF01527 Transposase FORC54_4253 PF00665 Integrase core domain FORC54_4263 PF14490 Helix-hairpin-helix containing domain FORC54_4263 PF13538 UvrD-like helicase C-terminal domain FORC54_4263 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FORC54_4268 PF12561 ToxR activated gene A lipoprotein domain FORC54_4268 PF00041 Fibronectin type III domain FORC54_4269 PF00571 CBS domain FORC54_4269 PF03471 Transporter associated domain FORC54_4269 PF01595 Cyclin M transmembrane N-terminal domain FORC54_4270 PF00171 Aldehyde dehydrogenase family FORC54_4271 PF01590 GAF domain FORC54_4271 PF00158 Sigma-54 interaction domain FORC54_4271 PF02954 Bacterial regulatory protein, Fis family FORC54_4272 PF03707 Bacterial signalling protein N terminal repeat FORC54_4272 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4272 PF00563 EAL domain FORC54_4273 PF13407 Periplasmic binding protein domain FORC54_4274 PF02798 Glutathione S-transferase, N-terminal domain FORC54_4274 PF14497 Glutathione S-transferase, C-terminal domain FORC54_4275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4275 PF03466 LysR substrate binding domain FORC54_4276 PF02567 Phenazine biosynthesis-like protein FORC54_4277 PF00196 Bacterial regulatory proteins, luxR family FORC54_4277 PF00072 Response regulator receiver domain FORC54_4278 PF01479 S4 domain FORC54_4278 PF00579 tRNA synthetases class I (W and Y) FORC54_4279 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FORC54_4279 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FORC54_4282 PF13533 Biotin-lipoyl like FORC54_4284 PF00753 Metallo-beta-lactamase superfamily FORC54_4284 PF14863 Alkyl sulfatase dimerisation FORC54_4284 PF14864 Alkyl sulfatase C-terminal FORC54_4286 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4286 PF03466 LysR substrate binding domain FORC54_4287 PF00884 Sulfatase FORC54_4287 PF08019 Phosphoethanolamine transferase EptA/EptB FORC54_4288 PF01758 Sodium Bile acid symporter family FORC54_4291 PF07687 Peptidase dimerisation domain FORC54_4291 PF01546 Peptidase family M20/M25/M40 FORC54_4292 PF07670 Nucleoside recognition FORC54_4293 PF07670 Nucleoside recognition FORC54_4295 PF00128 Alpha amylase, catalytic domain FORC54_4296 PF01081 KDPG and KHG aldolase FORC54_4297 PF00294 pfkB family carbohydrate kinase FORC54_4298 PF00892 EamA-like transporter family FORC54_4300 PF03466 LysR substrate binding domain FORC54_4300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4303 PF08543 Phosphomethylpyrimidine kinase FORC54_4304 PF00155 Aminotransferase class I and II FORC54_4305 PF02080 TrkA-C domain FORC54_4305 PF06826 Predicted Permease Membrane Region FORC54_4308 PF13533 Biotin-lipoyl like FORC54_4311 PF00135 Carboxylesterase family FORC54_4312 PF13091 PLD-like domain FORC54_4313 PF17243 POTRA domain TamA domain 1 FORC54_4313 PF01103 Surface antigen FORC54_4315 PF07883 Cupin domain FORC54_4316 PF10688 Bacterial inner membrane protein FORC54_4318 PF01614 Bacterial transcriptional regulator FORC54_4318 PF09339 IclR helix-turn-helix domain FORC54_4322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4322 PF00672 HAMP domain FORC54_4322 PF12729 Four helix bundle sensory module for signal transduction FORC54_4329 PF00924 Mechanosensitive ion channel FORC54_4332 PF00873 AcrB/AcrD/AcrF family FORC54_4333 PF13533 Biotin-lipoyl like FORC54_4337 PF01627 Hpt domain FORC54_4337 PF00072 Response regulator receiver domain FORC54_4337 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC54_4337 PF00672 HAMP domain FORC54_4337 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4337 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4338 PF00293 NUDIX domain FORC54_4339 PF01161 Phosphatidylethanolamine-binding protein FORC54_4340 PF12833 Helix-turn-helix domain FORC54_4341 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FORC54_4342 PF09278 MerR, DNA binding FORC54_4342 PF00376 MerR family regulatory protein FORC54_4344 PF00367 phosphotransferase system, EIIB FORC54_4344 PF02378 Phosphotransferase system, EIIC FORC54_4346 PF17151 Periplasmic sensor domain FORC54_4346 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4347 PF00583 Acetyltransferase (GNAT) family FORC54_4348 PF00679 Elongation factor G C-terminus FORC54_4348 PF14492 Elongation Factor G, domain II FORC54_4348 PF03764 Elongation factor G, domain IV FORC54_4348 PF00009 Elongation factor Tu GTP binding domain FORC54_4348 PF03144 Elongation factor Tu domain 2 FORC54_4351 PF02001 Protein of unknown function DUF134 FORC54_4353 PF03150 Di-haem cytochrome c peroxidase FORC54_4353 PF00034 Cytochrome c FORC54_4354 PF06942 GlpM protein FORC54_4356 PF12833 Helix-turn-helix domain FORC54_4357 PF07690 Major Facilitator Superfamily FORC54_4361 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FORC54_4362 PF00892 EamA-like transporter family FORC54_4363 PF00175 Oxidoreductase NAD-binding domain FORC54_4363 PF00970 Oxidoreductase FAD-binding domain FORC54_4365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4365 PF03466 LysR substrate binding domain FORC54_4367 PF00881 Nitroreductase family FORC54_4368 PF00561 alpha/beta hydrolase fold FORC54_4369 PF00271 Helicase conserved C-terminal domain FORC54_4369 PF00270 DEAD/DEAH box helicase FORC54_4375 PF07504 Fungalysin/Thermolysin Propeptide Motif FORC54_4375 PF03413 Peptidase propeptide and YPEB domain FORC54_4375 PF01447 Thermolysin metallopeptidase, catalytic domain FORC54_4375 PF02868 Thermolysin metallopeptidase, alpha-helical domain FORC54_4375 PF04151 Bacterial pre-peptidase C-terminal domain FORC54_4376 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FORC54_4376 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FORC54_4378 PF13599 Pentapeptide repeats (9 copies) FORC54_4380 PF00672 HAMP domain FORC54_4380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4381 PF00072 Response regulator receiver domain FORC54_4381 PF00672 HAMP domain FORC54_4381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4381 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4381 PF01627 Hpt domain FORC54_4381 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FORC54_4382 PF00072 Response regulator receiver domain FORC54_4384 PF01266 FAD dependent oxidoreductase FORC54_4388 PF00072 Response regulator receiver domain FORC54_4388 PF02954 Bacterial regulatory protein, Fis family FORC54_4388 PF00158 Sigma-54 interaction domain FORC54_4389 PF02743 Cache domain FORC54_4389 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4389 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4391 PF14864 Alkyl sulfatase C-terminal FORC54_4391 PF14863 Alkyl sulfatase dimerisation FORC54_4391 PF00753 Metallo-beta-lactamase superfamily FORC54_4393 PF00072 Response regulator receiver domain FORC54_4393 PF00486 Transcriptional regulatory protein, C terminal FORC54_4394 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4394 PF00672 HAMP domain FORC54_4395 PF03466 LysR substrate binding domain FORC54_4395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4396 PF00529 HlyD membrane-fusion protein of T1SS FORC54_4396 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FORC54_4398 PF01717 Cobalamin-independent synthase, Catalytic domain FORC54_4398 PF08267 Cobalamin-independent synthase, N-terminal domain FORC54_4401 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4408 PF02811 PHP domain FORC54_4408 PF14579 Helix-hairpin-helix motif FORC54_4408 PF00929 Exonuclease FORC54_4408 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FORC54_4408 PF11490 DNA polymerase III polC-type N-terminus II FORC54_4408 PF07733 Bacterial DNA polymerase III alpha NTPase domain FORC54_4409 PF02687 FtsX-like permease family FORC54_4409 PF12704 MacB-like periplasmic core domain FORC54_4409 PF00005 ABC transporter FORC54_4410 PF00005 ABC transporter FORC54_4410 PF02687 FtsX-like permease family FORC54_4410 PF12704 MacB-like periplasmic core domain FORC54_4411 PF00005 ABC transporter FORC54_4411 PF02687 FtsX-like permease family FORC54_4411 PF12704 MacB-like periplasmic core domain FORC54_4416 PF00005 ABC transporter FORC54_4417 PF01497 Periplasmic binding protein FORC54_4418 PF01032 FecCD transport family FORC54_4420 PF00593 TonB dependent receptor FORC54_4420 PF07715 TonB-dependent Receptor Plug Domain FORC54_4421 PF01116 Fructose-bisphosphate aldolase class-II FORC54_4422 PF01979 Amidohydrolase family FORC54_4423 PF03610 PTS system fructose IIA component FORC54_4424 PF03613 PTS system mannose/fructose/sorbose family IID component FORC54_4425 PF03609 PTS system sorbose-specific iic component FORC54_4426 PF03830 PTS system sorbose subfamily IIB component FORC54_4427 PF01380 SIS domain FORC54_4428 PF08013 Tagatose 6 phosphate kinase FORC54_4429 PF08220 DeoR-like helix-turn-helix domain FORC54_4429 PF00455 DeoR C terminal sensor domain FORC54_4431 PF08220 DeoR-like helix-turn-helix domain FORC54_4431 PF00455 DeoR C terminal sensor domain FORC54_4432 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FORC54_4432 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FORC54_4433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4433 PF03466 LysR substrate binding domain FORC54_4434 PF14863 Alkyl sulfatase dimerisation FORC54_4434 PF00753 Metallo-beta-lactamase superfamily FORC54_4434 PF14864 Alkyl sulfatase C-terminal FORC54_4445 PF01641 SelR domain FORC54_4446 PF01625 Peptide methionine sulfoxide reductase FORC54_4450 PF00672 HAMP domain FORC54_4450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4452 PF00462 Glutaredoxin FORC54_4453 PF12852 Cupin FORC54_4453 PF12833 Helix-turn-helix domain FORC54_4458 PF03475 3-alpha domain FORC54_4458 PF03473 MOSC domain FORC54_4459 PF00356 Bacterial regulatory proteins, lacI family FORC54_4460 PF03553 Na+/H+ antiporter family FORC54_4461 PF00155 Aminotransferase class I and II FORC54_4462 PF00270 DEAD/DEAH box helicase FORC54_4462 PF00271 Helicase conserved C-terminal domain FORC54_4463 PF03786 D-mannonate dehydratase (UxuA) FORC54_4464 PF00392 Bacterial regulatory proteins, gntR family FORC54_4464 PF07729 FCD domain FORC54_4465 PF03480 Bacterial extracellular solute-binding protein, family 7 FORC54_4466 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FORC54_4467 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FORC54_4468 PF01232 Mannitol dehydrogenase Rossmann domain FORC54_4468 PF08125 Mannitol dehydrogenase C-terminal domain FORC54_4469 PF02614 Glucuronate isomerase FORC54_4470 PF00294 pfkB family carbohydrate kinase FORC54_4471 PF01081 KDPG and KHG aldolase FORC54_4472 PF10688 Bacterial inner membrane protein FORC54_4473 PF03466 LysR substrate binding domain FORC54_4473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4475 PF07690 Major Facilitator Superfamily FORC54_4477 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FORC54_4478 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FORC54_4481 PF08803 Putative mono-oxygenase ydhR FORC54_4482 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FORC54_4482 PF03466 LysR substrate binding domain FORC54_4484 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FORC54_4486 PF08220 DeoR-like helix-turn-helix domain FORC54_4486 PF00455 DeoR C terminal sensor domain FORC54_4487 PF03611 PTS system sugar-specific permease component FORC54_4488 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FORC54_4489 PF00596 Class II Aldolase and Adducin N-terminal domain FORC54_4491 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC54_4492 PF01261 Xylose isomerase-like TIM barrel FORC54_4495 PF00664 ABC transporter transmembrane region FORC54_4495 PF00005 ABC transporter FORC54_4497 PF01037 Lrp/AsnC ligand binding domain FORC54_4500 PF00474 Sodium:solute symporter family FORC54_4502 PF00171 Aldehyde dehydrogenase family FORC54_4502 PF14850 DNA-binding domain of Proline dehydrogenase FORC54_4502 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FORC54_4502 PF01619 Proline dehydrogenase FORC54_4503 PF12833 Helix-turn-helix domain FORC54_4505 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FORC54_4505 PF01243 Pyridoxamine 5'-phosphate oxidase FORC54_4506 PF02743 Cache domain FORC54_4506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4506 PF00512 His Kinase A (phospho-acceptor) domain FORC54_4507 PF02954 Bacterial regulatory protein, Fis family FORC54_4507 PF00072 Response regulator receiver domain FORC54_4507 PF00158 Sigma-54 interaction domain FORC54_4508 PF00529 HlyD membrane-fusion protein of T1SS FORC54_4511 PF03412 Peptidase C39 family FORC54_4511 PF00005 ABC transporter FORC54_4511 PF00664 ABC transporter transmembrane region FORC54_4514 PF00118 TCP-1/cpn60 chaperonin family FORC54_4515 PF00166 Chaperonin 10 Kd subunit FORC54_4517 PF01029 NusB family FORC54_4517 PF01189 16S rRNA methyltransferase RsmB/F FORC54_4518 PF01380 SIS domain FORC54_4518 PF01418 Helix-turn-helix domain, rpiR family FORC54_4519 PF13580 SIS domain FORC54_4520 PF02378 Phosphotransferase system, EIIC FORC54_4520 PF00367 phosphotransferase system, EIIB FORC54_4522 PF00300 Histidine phosphatase superfamily (branch 1) FORC54_4523 PF01752 Collagenase FORC54_4523 PF08453 Peptidase family M9 N-terminal FORC54_4523 PF04151 Bacterial pre-peptidase C-terminal domain FORC54_4530 PF00072 Response regulator receiver domain FORC54_4530 PF00990 Diguanylate cyclase, GGDEF domain FORC54_4532 PF02203 Tar ligand binding domain homologue FORC54_4532 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4532 PF00672 HAMP domain FORC54_4533 PF01339 CheB methylesterase FORC54_4533 PF00072 Response regulator receiver domain FORC54_4534 PF03975 CheD chemotactic sensory transduction FORC54_4535 PF01739 CheR methyltransferase, SAM binding domain FORC54_4535 PF03705 CheR methyltransferase, all-alpha domain FORC54_4536 PF02203 Tar ligand binding domain homologue FORC54_4536 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FORC54_4536 PF00672 HAMP domain FORC54_4537 PF01584 CheW-like domain FORC54_4538 PF01584 CheW-like domain FORC54_4539 PF01584 CheW-like domain FORC54_4539 PF09078 CheY binding FORC54_4539 PF02895 Signal transducing histidine kinase, homodimeric domain FORC54_4539 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FORC54_4539 PF01627 Hpt domain FORC54_4540 PF00072 Response regulator receiver domain FORC54_4542 PF05127 Helicase FORC54_4542 PF13718 GNAT acetyltransferase 2 FORC54_4543 PF08775 ParB family FORC54_4543 PF02195 ParB-like nuclease domain FORC54_4544 PF13614 AAA domain FORC54_4544 PF18607 ParA helix turn helix domain FORC54_p007 PF02796 Helix-turn-helix domain of resolvase FORC54_p007 PF00239 Resolvase, N terminal domain FORC54_p010 PF00239 Resolvase, N terminal domain FORC54_p010 PF02796 Helix-turn-helix domain of resolvase FORC54_p017 PF01381 Helix-turn-helix FORC54_p017 PF00145 C-5 cytosine-specific DNA methylase FORC54_p018 PF12419 SNF2 Helicase protein FORC54_p018 PF00271 Helicase conserved C-terminal domain FORC54_p018 PF00176 SNF2 family N-terminal domain FORC54_p019 PF08676 MutL C terminal dimerisation domain FORC54_p019 PF01119 DNA mismatch repair protein, C-terminal domain FORC54_p025 PF07728 AAA domain (dynein-related subfamily) FORC54_p030 PF00717 Peptidase S24-like FORC54_p031 PF13438 Domain of unknown function (DUF4113) FORC54_p031 PF00817 impB/mucB/samB family FORC54_p031 PF11799 impB/mucB/samB family C-terminal domain FORC54_p033 PF13614 AAA domain FORC54_p034 PF08775 ParB family FORC54_p034 PF02195 ParB-like nuclease domain