FORC54_0001 SM00382 ATPases associated with a variety of cellular activities FORC54_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain FORC54_0002 SM00480 DNA polymerase III beta subunit FORC54_0004 SM00387 Histidine kinase-like ATPases FORC54_0004 SM00433 TopoisomeraseII FORC54_0006 SM00052 Putative diguanylate phosphodiesterase FORC54_0006 SM00267 diguanylate cyclase FORC54_0006 SM01079 FORC54_0006 FORC54_0016 SM00829 Enoylreductase FORC54_0031 SM00876 Biotin and Thiamin Synthesis associated domain FORC54_0042 SM00342 helix_turn_helix, arabinose operon control protein FORC54_0044 SM00341 Helicase and RNase D C-terminal FORC54_0044 SM00487 DEAD-like helicases superfamily FORC54_0044 SM00490 helicase superfamily c-terminal domain FORC54_0044 SM00956 FORC54_0044 FORC54_0048 SM00487 DEAD-like helicases superfamily FORC54_0048 SM00490 helicase superfamily c-terminal domain FORC54_0050 SM00357 Cold shock protein domain FORC54_0050 SM00382 ATPases associated with a variety of cellular activities FORC54_0050 SM00959 Rho termination factor, N-terminal domain FORC54_0067 SM01004 Delta-aminolevulinic acid dehydratase FORC54_0068 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC54_0068 SM00474 3'-5' exonuclease FORC54_0068 SM00475 5'-3' exonuclease FORC54_0068 SM00482 DNA polymerase A domain FORC54_0074 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_0075 SM00052 Putative diguanylate phosphodiesterase FORC54_0075 SM00267 diguanylate cyclase FORC54_0075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0076 SM00382 ATPases associated with a variety of cellular activities FORC54_0076 SM00448 cheY-homologous receiver domain FORC54_0077 SM00091 PAS domain FORC54_0077 SM00387 Histidine kinase-like ATPases FORC54_0077 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0079 SM01230 FORC54_0079 FORC54_0089 SM00363 S4 RNA-binding domain FORC54_0093 SM00382 ATPases associated with a variety of cellular activities FORC54_0109 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_0109 SM00732 Likely ribonuclease with RNase H fold. FORC54_0113 SM00422 helix_turn_helix, mercury resistance FORC54_0114 SM00421 helix_turn_helix, Lux Regulon FORC54_0116 SM00382 ATPases associated with a variety of cellular activities FORC54_0119 SM00448 cheY-homologous receiver domain FORC54_0119 SM00862 Transcriptional regulatory protein, C terminal FORC54_0120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0120 SM00387 Histidine kinase-like ATPases FORC54_0120 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0122 SM00487 DEAD-like helicases superfamily FORC54_0122 SM00490 helicase superfamily c-terminal domain FORC54_0124 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_0124 SM00954 Region found in RelA / SpoT proteins FORC54_0125 SM01409 FORC54_0125 FORC54_0126 SM00072 Guanylate kinase homologues. FORC54_0127 SM00028 Tetratricopeptide repeats FORC54_0138 SM00382 ATPases associated with a variety of cellular activities FORC54_0139 SM00382 ATPases associated with a variety of cellular activities FORC54_0151 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_0151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0151 SM01049 FORC54_0151 FORC54_0156 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FORC54_0156 SM01232 FORC54_0156 FORC54_0177 SM00858 FORC54_0177 FORC54_0193 SM00226 Low molecular weight phosphatase family FORC54_0211 SM00984 UDP binding domain FORC54_0215 SM00849 Metallo-beta-lactamase superfamily FORC54_0215 SM01027 Beta-Casp domain FORC54_0216 SM01403 FORC54_0216 FORC54_0220 SM01382 FORC54_0220 FORC54_0220 SM01383 FORC54_0220 FORC54_0223 SM00322 K homology RNA-binding domain FORC54_0227 SM01374 FORC54_0227 FORC54_0228 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FORC54_0241 SM00363 S4 RNA-binding domain FORC54_0241 SM01390 FORC54_0241 FORC54_0242 SM00662 RNA polymerases D FORC54_0259 SM00382 ATPases associated with a variety of cellular activities FORC54_0275 SM00382 ATPases associated with a variety of cellular activities FORC54_0278 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0278 SM00924 MgtE intracellular N domain FORC54_0284 SM00382 ATPases associated with a variety of cellular activities FORC54_0288 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0290 SM00382 ATPases associated with a variety of cellular activities FORC54_0297 SM00563 Phosphate acyltransferases FORC54_0312 SM00650 Ribosomal RNA adenine dimethylases FORC54_0316 SM00271 DnaJ molecular chaperone homology domain FORC54_0320 SM01329 FORC54_0320 FORC54_0321 SM00917 LeuA allosteric (dimerisation) domain FORC54_0323 SM00014 Acid phosphatase homologues FORC54_0329 SM00091 PAS domain FORC54_0329 SM00267 diguanylate cyclase FORC54_0330 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_0330 SM00895 FORC54_0330 FORC54_0332 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_0332 SM01134 FORC54_0332 FORC54_0335 SM00563 Phosphate acyltransferases FORC54_0338 SM00530 Helix-turn-helix XRE-family like proteins FORC54_0341 SM00342 helix_turn_helix, arabinose operon control protein FORC54_0354 SM00382 ATPases associated with a variety of cellular activities FORC54_0354 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_0359 SM00240 Forkhead associated domain FORC54_0367 SM00247 Beta/gamma crystallins FORC54_0387 SM00400 zinc finger FORC54_0387 SM00493 FORC54_0387 FORC54_0387 SM00766 DNA primase DnaG DnaB-binding FORC54_0393 SM01207 FORC54_0393 FORC54_0394 SM00905 Dihydroneopterin aldolase FORC54_0398 SM00382 ATPases associated with a variety of cellular activities FORC54_0399 SM00287 Bacterial SH3 domain homologues FORC54_0402 SM00880 FORC54_0402 FORC54_0402 SM01118 FORC54_0402 FORC54_0404 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_0412 SM00387 Histidine kinase-like ATPases FORC54_0412 SM00433 TopoisomeraseII FORC54_0413 SM00434 DNA Topoisomerase IV FORC54_0414 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC54_0415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC54_0425 SM00749 bacterial OsmY and nodulation domain FORC54_0441 SM00842 Cell division protein FtsA FORC54_0442 SM00864 Tubulin/FtsZ family, GTPase domain FORC54_0442 SM00865 Tubulin/FtsZ family, C-terminal domain FORC54_0445 SM00957 SecA DEAD-like domain FORC54_0445 SM00958 SecA preprotein cross-linking domain FORC54_0448 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain FORC54_0449 SM00851 MGS-like domain FORC54_0449 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FORC54_0463 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_0464 SM00091 PAS domain FORC54_0464 SM00267 diguanylate cyclase FORC54_0465 SM00073 Histidine Phosphotransfer domain FORC54_0465 SM00091 PAS domain FORC54_0465 SM00387 Histidine kinase-like ATPases FORC54_0465 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0465 SM00448 cheY-homologous receiver domain FORC54_0467 SM00448 cheY-homologous receiver domain FORC54_0467 SM00862 Transcriptional regulatory protein, C terminal FORC54_0475 SM00518 AP endonuclease family 2 FORC54_0476 SM00986 Uracil DNA glycosylase superfamily FORC54_0476 SM00987 UreE urease accessory protein, C-terminal domain FORC54_0481 SM00487 DEAD-like helicases superfamily FORC54_0481 SM00490 helicase superfamily c-terminal domain FORC54_0488 SM00937 FORC54_0488 FORC54_0495 SM00927 DNA mismatch repair enzyme MutH FORC54_0497 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_0501 SM01154 FORC54_0501 FORC54_0504 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC54_0507 SM00904 Riboflavin kinase FORC54_0512 SM00448 cheY-homologous receiver domain FORC54_0512 SM00850 LytTr DNA-binding domain FORC54_0521 SM00830 Chorismate mutase type II FORC54_0524 SM00382 ATPases associated with a variety of cellular activities FORC54_0528 SM00830 Chorismate mutase type II FORC54_0531 SM00363 S4 RNA-binding domain FORC54_0533 SM00382 ATPases associated with a variety of cellular activities FORC54_0533 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_0538 SM00448 cheY-homologous receiver domain FORC54_0538 SM00862 Transcriptional regulatory protein, C terminal FORC54_0539 SM00091 PAS domain FORC54_0539 SM00387 Histidine kinase-like ATPases FORC54_0539 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0545 SM00382 ATPases associated with a variety of cellular activities FORC54_0553 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0554 SM00020 Trypsin-like serine protease FORC54_0557 SM01323 FORC54_0557 FORC54_0568 SM00271 DnaJ molecular chaperone homology domain FORC54_0573 SM00562 FORC54_0573 FORC54_0579 SM00564 beta-propeller repeat FORC54_0580 SM00173 Ras subfamily of RAS small GTPases FORC54_0580 SM00382 ATPases associated with a variety of cellular activities FORC54_0582 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_0582 SM00267 diguanylate cyclase FORC54_0585 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0585 SM01240 FORC54_0585 FORC54_0587 SM00495 Chitin-binding domain type 3 FORC54_0602 SM00563 Phosphate acyltransferases FORC54_0603 SM00530 Helix-turn-helix XRE-family like proteins FORC54_0631 SM00271 DnaJ molecular chaperone homology domain FORC54_0639 SM00829 Enoylreductase FORC54_0642 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_0643 SM01211 FORC54_0643 FORC54_0653 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC54_0664 SM00861 Transketolase, pyrimidine binding domain FORC54_0670 SM00981 FORC54_0670 FORC54_0676 SM00477 DNA/RNA non-specific endonuclease FORC54_0676 SM00892 DNA/RNA non-specific endonuclease FORC54_0677 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC54_0677 SM00475 5'-3' exonuclease FORC54_0679 SM00267 diguanylate cyclase FORC54_0680 SM00028 Tetratricopeptide repeats FORC54_0686 SM00382 ATPases associated with a variety of cellular activities FORC54_0686 SM00930 FORC54_0686 FORC54_0688 SM00354 helix_turn _helix lactose operon repressor FORC54_0690 SM00642 Alpha-amylase domain FORC54_0696 SM00862 Transcriptional regulatory protein, C terminal FORC54_0700 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_0703 SM00936 Penicillin-binding protein 5, C-terminal domain FORC54_0714 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0714 SM01091 Transporter associated domain FORC54_0717 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_0723 SM01400 FORC54_0723 FORC54_0727 SM00937 FORC54_0727 FORC54_0734 SM00363 S4 RNA-binding domain FORC54_0735 SM00463 Small MutS-related domain FORC54_0738 SM01081 Putative carbohydrate binding domain FORC54_0750 SM00858 FORC54_0750 FORC54_0751 SM00260 Two component signalling adaptor domain FORC54_0751 SM00448 cheY-homologous receiver domain FORC54_0752 SM00138 Methyltransferase, chemotaxis proteins FORC54_0761 SM00047 Lysozyme subfamily 2 FORC54_0773 SM00771 ZipA, C-terminal domain (FtsZ-binding) FORC54_0774 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC54_0774 SM00292 breast cancer carboxy-terminal domain FORC54_0774 SM00532 Ligase N family FORC54_0778 SM00244 prohibitin homologues FORC54_0784 SM00938 Nitrogen regulatory protein P-II FORC54_0785 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_0790 SM00862 Transcriptional regulatory protein, C terminal FORC54_0791 SM00387 Histidine kinase-like ATPases FORC54_0794 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_0794 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0796 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FORC54_0821 SM00861 Transketolase, pyrimidine binding domain FORC54_0824 SM00881 CoA binding domain FORC54_0826 SM00382 ATPases associated with a variety of cellular activities FORC54_0828 SM00342 helix_turn_helix, arabinose operon control protein FORC54_0833 SM00836 DALR anticodon binding domain FORC54_0833 SM01016 Arginyl tRNA synthetase N terminal dom FORC54_0837 SM00487 DEAD-like helicases superfamily FORC54_0837 SM00491 FORC54_0837 FORC54_0843 SM00474 3'-5' exonuclease FORC54_0853 SM00448 cheY-homologous receiver domain FORC54_0853 SM00862 Transcriptional regulatory protein, C terminal FORC54_0854 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0855 SM00825 Beta-ketoacyl synthase FORC54_0858 SM00825 Beta-ketoacyl synthase FORC54_0870 SM00563 Phosphate acyltransferases FORC54_0875 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC54_0876 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_0876 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0878 SM00448 cheY-homologous receiver domain FORC54_0878 SM00862 Transcriptional regulatory protein, C terminal FORC54_0879 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_0879 SM00387 Histidine kinase-like ATPases FORC54_0883 SM00382 ATPases associated with a variety of cellular activities FORC54_0889 SM00382 ATPases associated with a variety of cellular activities FORC54_0889 SM00448 cheY-homologous receiver domain FORC54_0890 SM00387 Histidine kinase-like ATPases FORC54_0890 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0893 SM00382 ATPases associated with a variety of cellular activities FORC54_0893 SM00994 ClpX C4-type zinc finger FORC54_0893 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_0894 SM00382 ATPases associated with a variety of cellular activities FORC54_0894 SM00464 Found in ATP-dependent protease La (LON) FORC54_0895 SM00411 bacterial (prokaryotic) histone like domain FORC54_0899 SM01144 FORC54_0899 FORC54_0900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_0901 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_0907 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FORC54_0911 SM00563 Phosphate acyltransferases FORC54_0913 SM00978 FORC54_0913 FORC54_0920 SM00344 helix_turn_helix ASNC type FORC54_0926 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_0926 SM00267 diguanylate cyclase FORC54_0929 SM00244 prohibitin homologues FORC54_0930 SM00244 prohibitin homologues FORC54_0935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_0938 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_0942 SM00870 FORC54_0942 FORC54_0946 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC54_0946 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC54_0946 SM00493 FORC54_0946 FORC54_0948 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_0948 SM00387 Histidine kinase-like ATPases FORC54_0948 SM00388 His Kinase A (phosphoacceptor) domain FORC54_0948 SM00448 cheY-homologous receiver domain FORC54_0949 SM00267 diguanylate cyclase FORC54_0949 SM00448 cheY-homologous receiver domain FORC54_0950 SM00155 Phospholipase D. Active site motifs. FORC54_0964 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC54_0975 SM00479 FORC54_0975 FORC54_0979 SM00478 endonuclease III FORC54_0979 SM00525 FORC54_0979 FORC54_0981 SM00900 FORC54_0981 FORC54_0988 SM00487 DEAD-like helicases superfamily FORC54_0988 SM00490 helicase superfamily c-terminal domain FORC54_0989 SM00382 ATPases associated with a variety of cellular activities FORC54_0989 SM00448 cheY-homologous receiver domain FORC54_0992 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_0993 SM00852 Probable molybdopterin binding domain FORC54_1001 SM00382 ATPases associated with a variety of cellular activities FORC54_1002 SM00382 ATPases associated with a variety of cellular activities FORC54_1016 SM00481 DNA polymerase alpha chain like domain FORC54_1019 SM00363 S4 RNA-binding domain FORC54_1021 SM00841 Elongation factor P, C-terminal FORC54_1021 SM01185 FORC54_1021 FORC54_1023 SM00052 Putative diguanylate phosphodiesterase FORC54_1024 SM00486 DNA polymerase type-B family FORC54_1025 SM00421 helix_turn_helix, Lux Regulon FORC54_1025 SM00448 cheY-homologous receiver domain FORC54_1026 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC54_1026 SM00465 GIY-YIG type nucleases (URI domain) FORC54_1033 SM00852 Probable molybdopterin binding domain FORC54_1039 SM00434 DNA Topoisomerase IV FORC54_1056 SM00226 Low molecular weight phosphatase family FORC54_1058 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_1059 SM00363 S4 RNA-binding domain FORC54_1065 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FORC54_1066 SM00822 FORC54_1066 FORC54_1068 SM00825 Beta-ketoacyl synthase FORC54_1081 SM00260 Two component signalling adaptor domain FORC54_1081 SM00448 cheY-homologous receiver domain FORC54_1082 SM00481 DNA polymerase alpha chain like domain FORC54_1088 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_1089 SM00411 bacterial (prokaryotic) histone like domain FORC54_1091 SM00028 Tetratricopeptide repeats FORC54_1092 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC54_1097 SM00382 ATPases associated with a variety of cellular activities FORC54_1098 SM00382 ATPases associated with a variety of cellular activities FORC54_1105 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC54_1105 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC54_1106 SM00344 helix_turn_helix ASNC type FORC54_1107 SM00843 FORC54_1107 FORC54_1109 SM00382 ATPases associated with a variety of cellular activities FORC54_1112 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_1112 SM00876 Biotin and Thiamin Synthesis associated domain FORC54_1131 SM00528 Domain in histone-like proteins of HNS family FORC54_1142 SM00052 Putative diguanylate phosphodiesterase FORC54_1145 SM00840 FORC54_1145 FORC54_1164 SM01131 FORC54_1164 FORC54_1167 SM00382 ATPases associated with a variety of cellular activities FORC54_1168 SM00382 ATPases associated with a variety of cellular activities FORC54_1172 SM00382 ATPases associated with a variety of cellular activities FORC54_1181 SM00155 Phospholipase D. Active site motifs. FORC54_1183 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1183 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1188 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_1188 SM00382 ATPases associated with a variety of cellular activities FORC54_1190 SM00382 ATPases associated with a variety of cellular activities FORC54_1200 SM00267 diguanylate cyclase FORC54_1204 SM00387 Histidine kinase-like ATPases FORC54_1205 SM00448 cheY-homologous receiver domain FORC54_1205 SM00862 Transcriptional regulatory protein, C terminal FORC54_1207 SM00487 DEAD-like helicases superfamily FORC54_1207 SM00490 helicase superfamily c-terminal domain FORC54_1208 SM00363 S4 RNA-binding domain FORC54_1212 SM00382 ATPases associated with a variety of cellular activities FORC54_1230 SM00448 cheY-homologous receiver domain FORC54_1231 SM00387 Histidine kinase-like ATPases FORC54_1234 SM00382 ATPases associated with a variety of cellular activities FORC54_1235 SM00382 ATPases associated with a variety of cellular activities FORC54_1240 SM00267 diguanylate cyclase FORC54_1243 SM00919 Malic enzyme, NAD binding domain FORC54_1243 SM01274 FORC54_1243 FORC54_1244 SM00487 DEAD-like helicases superfamily FORC54_1244 SM00490 helicase superfamily c-terminal domain FORC54_1244 SM00847 Helicase associated domain (HA2) Add an annotation FORC54_1257 SM00855 Phosphoglycerate mutase family FORC54_1261 SM00382 ATPases associated with a variety of cellular activities FORC54_1269 SM00028 Tetratricopeptide repeats FORC54_1277 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_1281 SM00267 diguanylate cyclase FORC54_1282 SM00357 Cold shock protein domain FORC54_1286 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_1286 SM01134 FORC54_1286 FORC54_1287 SM00382 ATPases associated with a variety of cellular activities FORC54_1291 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1291 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1293 SM00421 helix_turn_helix, Lux Regulon FORC54_1301 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_1301 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_1302 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_1302 SM00895 FORC54_1302 FORC54_1309 SM00020 Trypsin-like serine protease FORC54_1309 SM00495 Chitin-binding domain type 3 FORC54_1311 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1315 SM00028 Tetratricopeptide repeats FORC54_1315 SM00267 diguanylate cyclase FORC54_1320 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC54_1321 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1325 SM00382 ATPases associated with a variety of cellular activities FORC54_1328 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_1332 SM00563 Phosphate acyltransferases FORC54_1333 SM00342 helix_turn_helix, arabinose operon control protein FORC54_1343 SM00903 Flavin reductase like domain FORC54_1344 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_1357 SM00342 helix_turn_helix, arabinose operon control protein FORC54_1366 SM00421 helix_turn_helix, Lux Regulon FORC54_1372 SM00091 PAS domain FORC54_1372 SM00387 Histidine kinase-like ATPases FORC54_1373 SM00448 cheY-homologous receiver domain FORC54_1376 SM01350 FORC54_1376 FORC54_1394 SM00382 ATPases associated with a variety of cellular activities FORC54_1394 SM00448 cheY-homologous receiver domain FORC54_1395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1395 SM00387 Histidine kinase-like ATPases FORC54_1395 SM00388 His Kinase A (phosphoacceptor) domain FORC54_1395 SM00448 cheY-homologous receiver domain FORC54_1402 SM00028 Tetratricopeptide repeats FORC54_1402 SM00267 diguanylate cyclase FORC54_1411 SM00382 ATPases associated with a variety of cellular activities FORC54_1413 SM00945 ProQ/FINO family FORC54_1414 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC54_1414 SM00245 tail specific protease FORC54_1420 SM00981 FORC54_1420 FORC54_1422 SM00382 ATPases associated with a variety of cellular activities FORC54_1433 SM00530 Helix-turn-helix XRE-family like proteins FORC54_1438 SM00530 Helix-turn-helix XRE-family like proteins FORC54_1443 SM00387 Histidine kinase-like ATPases FORC54_1443 SM00388 His Kinase A (phosphoacceptor) domain FORC54_1443 SM00448 cheY-homologous receiver domain FORC54_1444 SM00897 FIST N domain FORC54_1444 SM01204 FORC54_1444 FORC54_1454 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_1454 SM00419 helix_turn_helix, cAMP Regulatory protein FORC54_1460 SM00382 ATPases associated with a variety of cellular activities FORC54_1472 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC54_1479 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1479 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1480 SM00382 ATPases associated with a variety of cellular activities FORC54_1483 SM00387 Histidine kinase-like ATPases FORC54_1483 SM00388 His Kinase A (phosphoacceptor) domain FORC54_1484 SM00382 ATPases associated with a variety of cellular activities FORC54_1484 SM00448 cheY-homologous receiver domain FORC54_1487 SM00382 ATPases associated with a variety of cellular activities FORC54_1489 SM00852 Probable molybdopterin binding domain FORC54_1492 SM01144 FORC54_1492 FORC54_1494 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1497 SM00267 diguanylate cyclase FORC54_1498 SM00448 cheY-homologous receiver domain FORC54_1542 SM01034 Sensors of blue-light using FAD FORC54_1612 SM01034 Sensors of blue-light using FAD FORC54_1621 SM01022 FORC54_1621 FORC54_1664 SM00978 FORC54_1664 FORC54_1696 SM00901 FORC54_1696 FORC54_1749 SM01040 BRO family, N-terminal domain FORC54_1772 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC54_1775 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_1775 SM00866 FORC54_1775 FORC54_1781 SM00020 Trypsin-like serine protease FORC54_1787 SM00671 Sel1-like repeats. FORC54_1793 SM00411 bacterial (prokaryotic) histone like domain FORC54_1798 SM00873 B3/4 domain FORC54_1798 SM00874 tRNA synthetase B5 domain FORC54_1798 SM00896 Ferredoxin-fold anticodon binding domain FORC54_1800 SM00267 diguanylate cyclase FORC54_1807 SM00530 Helix-turn-helix XRE-family like proteins FORC54_1821 SM00382 ATPases associated with a variety of cellular activities FORC54_1821 SM00487 DEAD-like helicases superfamily FORC54_1821 SM00490 helicase superfamily c-terminal domain FORC54_1821 SM00847 Helicase associated domain (HA2) Add an annotation FORC54_1822 SM00636 FORC54_1822 FORC54_1827 SM00028 Tetratricopeptide repeats FORC54_1834 SM00858 FORC54_1834 FORC54_1843 SM00479 FORC54_1843 FORC54_1844 SM00267 diguanylate cyclase FORC54_1844 SM01079 FORC54_1844 FORC54_1850 SM00342 helix_turn_helix, arabinose operon control protein FORC54_1854 SM00267 diguanylate cyclase FORC54_1869 SM00382 ATPases associated with a variety of cellular activities FORC54_1870 SM00382 ATPases associated with a variety of cellular activities FORC54_1877 SM00046 Diacylglycerol kinase catalytic domain (presumed) FORC54_1880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_1881 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FORC54_1886 SM00052 Putative diguanylate phosphodiesterase FORC54_1886 SM00267 diguanylate cyclase FORC54_1887 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_1889 SM00052 Putative diguanylate phosphodiesterase FORC54_1889 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_1889 SM00267 diguanylate cyclase FORC54_1890 SM00267 diguanylate cyclase FORC54_1891 SM00448 cheY-homologous receiver domain FORC54_1892 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_1892 SM00387 Histidine kinase-like ATPases FORC54_1897 SM00091 PAS domain FORC54_1897 SM00382 ATPases associated with a variety of cellular activities FORC54_1903 SM00387 Histidine kinase-like ATPases FORC54_1903 SM00388 His Kinase A (phosphoacceptor) domain FORC54_1903 SM00448 cheY-homologous receiver domain FORC54_1908 SM00052 Putative diguanylate phosphodiesterase FORC54_1911 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1911 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_1918 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_1918 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_1919 SM00479 FORC54_1919 FORC54_1920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_1922 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_1923 SM00421 helix_turn_helix, Lux Regulon FORC54_1923 SM00448 cheY-homologous receiver domain FORC54_1924 SM00387 Histidine kinase-like ATPases FORC54_1924 SM01049 FORC54_1924 FORC54_1930 SM00849 Metallo-beta-lactamase superfamily FORC54_1938 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_1943 SM00267 diguanylate cyclase FORC54_1944 SM00642 Alpha-amylase domain FORC54_1945 SM00382 ATPases associated with a variety of cellular activities FORC54_1955 SM00052 Putative diguanylate phosphodiesterase FORC54_1955 SM00091 PAS domain FORC54_1956 SM00052 Putative diguanylate phosphodiesterase FORC54_1956 SM00091 PAS domain FORC54_1957 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_1958 SM00052 Putative diguanylate phosphodiesterase FORC54_1958 SM00267 diguanylate cyclase FORC54_1958 SM01049 FORC54_1958 FORC54_1961 SM00342 helix_turn_helix, arabinose operon control protein FORC54_1968 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_1976 SM00530 Helix-turn-helix XRE-family like proteins FORC54_1991 SM00387 Histidine kinase-like ATPases FORC54_1991 SM00388 His Kinase A (phosphoacceptor) domain FORC54_1991 SM00448 cheY-homologous receiver domain FORC54_1999 SM00028 Tetratricopeptide repeats FORC54_2010 SM00382 ATPases associated with a variety of cellular activities FORC54_2011 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC54_2025 SM00448 cheY-homologous receiver domain FORC54_2025 SM00862 Transcriptional regulatory protein, C terminal FORC54_2027 SM00354 helix_turn _helix lactose operon repressor FORC54_2035 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC54_2035 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC54_2035 SM00493 FORC54_2035 FORC54_2041 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_2042 SM00382 ATPases associated with a variety of cellular activities FORC54_2042 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_2044 SM00357 Cold shock protein domain FORC54_2049 SM00491 FORC54_2049 FORC54_2053 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2053 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2055 SM01276 FORC54_2055 FORC54_2058 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_2058 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC54_2059 SM00382 ATPases associated with a variety of cellular activities FORC54_2064 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2064 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2068 SM00763 PrkA AAA domain FORC54_2071 SM00267 diguanylate cyclase FORC54_2075 SM00382 ATPases associated with a variety of cellular activities FORC54_2076 SM00849 Metallo-beta-lactamase superfamily FORC54_2079 SM00382 ATPases associated with a variety of cellular activities FORC54_2082 SM00487 DEAD-like helicases superfamily FORC54_2082 SM00490 helicase superfamily c-terminal domain FORC54_2082 SM00982 FORC54_2082 FORC54_2082 SM01058 CarD-like/TRCF domain FORC54_2092 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2096 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_2097 SM00267 diguanylate cyclase FORC54_2101 SM00862 Transcriptional regulatory protein, C terminal FORC54_2102 SM00267 diguanylate cyclase FORC54_2108 SM00098 Alkaline phosphatase homologues FORC54_2115 SM00448 cheY-homologous receiver domain FORC54_2115 SM00862 Transcriptional regulatory protein, C terminal FORC54_2116 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2116 SM00387 Histidine kinase-like ATPases FORC54_2116 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2119 SM00493 FORC54_2119 FORC54_2121 SM00382 ATPases associated with a variety of cellular activities FORC54_2124 SM00448 cheY-homologous receiver domain FORC54_2133 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC54_2135 SM00825 Beta-ketoacyl synthase FORC54_2142 SM00463 Small MutS-related domain FORC54_2143 SM00855 Phosphoglycerate mutase family FORC54_2160 SM00382 ATPases associated with a variety of cellular activities FORC54_2162 SM00260 Two component signalling adaptor domain FORC54_2163 SM00260 Two component signalling adaptor domain FORC54_2165 SM00448 cheY-homologous receiver domain FORC54_2166 SM00073 Histidine Phosphotransfer domain FORC54_2166 SM00260 Two component signalling adaptor domain FORC54_2166 SM00387 Histidine kinase-like ATPases FORC54_2166 SM01231 FORC54_2166 FORC54_2168 SM00448 cheY-homologous receiver domain FORC54_2171 SM00382 ATPases associated with a variety of cellular activities FORC54_2171 SM00962 SRP54-type protein, GTPase domain FORC54_2183 SM00382 ATPases associated with a variety of cellular activities FORC54_2188 SM00382 ATPases associated with a variety of cellular activities FORC54_2188 SM00448 cheY-homologous receiver domain FORC54_2189 SM00387 Histidine kinase-like ATPases FORC54_2189 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2190 SM00382 ATPases associated with a variety of cellular activities FORC54_2208 SM01130 FORC54_2208 FORC54_2213 SM00028 Tetratricopeptide repeats FORC54_2231 SM00479 FORC54_2231 FORC54_2234 SM00849 Metallo-beta-lactamase superfamily FORC54_2235 SM00257 Lysin motif FORC54_2238 SM00938 Nitrogen regulatory protein P-II FORC54_2240 SM00977 TilS substrate C-terminal domain FORC54_2242 SM00481 DNA polymerase alpha chain like domain FORC54_2248 SM00935 Outer membrane protein (OmpH-like) FORC54_2250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC54_2259 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_2278 SM00495 Chitin-binding domain type 3 FORC54_2278 SM00636 FORC54_2278 FORC54_2280 SM00487 DEAD-like helicases superfamily FORC54_2280 SM00490 helicase superfamily c-terminal domain FORC54_2282 SM00267 diguanylate cyclase FORC54_2282 SM00448 cheY-homologous receiver domain FORC54_2288 SM00900 FORC54_2288 FORC54_2307 SM00925 MltA specific insert domain FORC54_2322 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_2322 SM01134 FORC54_2322 FORC54_2330 SM00354 helix_turn _helix lactose operon repressor FORC54_2331 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2331 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2331 SM01049 FORC54_2331 FORC54_2336 SM00354 helix_turn _helix lactose operon repressor FORC54_2338 SM01038 Beta galactosidase small chain FORC54_2348 SM00028 Tetratricopeptide repeats FORC54_2358 SM00858 FORC54_2358 FORC54_2364 SM00342 helix_turn_helix, arabinose operon control protein FORC54_2366 SM00838 Elongation factor G C-terminus FORC54_2366 SM00889 Elongation factor G, domain IV FORC54_2369 SM00267 diguanylate cyclase FORC54_2370 SM00382 ATPases associated with a variety of cellular activities FORC54_2376 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain FORC54_2377 SM01133 FORC54_2377 FORC54_2381 SM00267 diguanylate cyclase FORC54_2382 SM00052 Putative diguanylate phosphodiesterase FORC54_2382 SM00267 diguanylate cyclase FORC54_2387 SM00052 Putative diguanylate phosphodiesterase FORC54_2387 SM00091 PAS domain FORC54_2387 SM00267 diguanylate cyclase FORC54_2391 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_2392 SM00028 Tetratricopeptide repeats FORC54_2393 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_2393 SM00322 K homology RNA-binding domain FORC54_2397 SM01387 FORC54_2397 FORC54_2401 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_2406 SM00382 ATPases associated with a variety of cellular activities FORC54_2408 SM01103 FORC54_2408 FORC54_2422 SM00091 PAS domain FORC54_2422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2422 SM00387 Histidine kinase-like ATPases FORC54_2422 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2422 SM00448 cheY-homologous receiver domain FORC54_2426 SM00382 ATPases associated with a variety of cellular activities FORC54_2427 SM00382 ATPases associated with a variety of cellular activities FORC54_2431 SM01068 Putative carbohydrate binding domain FORC54_2433 SM00382 ATPases associated with a variety of cellular activities FORC54_2437 SM00938 Nitrogen regulatory protein P-II FORC54_2445 SM00487 DEAD-like helicases superfamily FORC54_2445 SM00490 helicase superfamily c-terminal domain FORC54_2445 SM00847 Helicase associated domain (HA2) Add an annotation FORC54_2454 SM00382 ATPases associated with a variety of cellular activities FORC54_2456 SM00947 Carbonic anhydrase FORC54_2462 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_2462 SM00895 FORC54_2462 FORC54_2464 SM00644 FORC54_2464 FORC54_2476 SM00382 ATPases associated with a variety of cellular activities FORC54_2476 SM00962 SRP54-type protein, GTPase domain FORC54_2476 SM00963 SRP54-type protein, helical bundle domain FORC54_2478 SM01091 Transporter associated domain FORC54_2484 SM00829 Enoylreductase FORC54_2491 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC54_2493 SM00382 ATPases associated with a variety of cellular activities FORC54_2495 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FORC54_2495 SM00534 ATPase domain of DNA mismatch repair MUTS family FORC54_2497 SM00257 Lysin motif FORC54_2505 SM01192 FORC54_2505 FORC54_2505 SM01193 FORC54_2505 FORC54_2508 SM00954 Region found in RelA / SpoT proteins FORC54_2510 SM00073 Histidine Phosphotransfer domain FORC54_2510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2510 SM00387 Histidine kinase-like ATPases FORC54_2510 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2510 SM00448 cheY-homologous receiver domain FORC54_2511 SM00267 diguanylate cyclase FORC54_2518 SM00358 Double-stranded RNA binding motif FORC54_2518 SM00535 Ribonuclease III family FORC54_2520 SM00838 Elongation factor G C-terminus FORC54_2544 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_2546 SM00861 Transketolase, pyrimidine binding domain FORC54_2549 SM00731 SprT homologues. FORC54_2554 SM00732 Likely ribonuclease with RNase H fold. FORC54_2560 SM01152 FORC54_2560 FORC54_2563 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_2566 SM00478 endonuclease III FORC54_2566 SM00525 FORC54_2566 FORC54_2569 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2569 SM01049 FORC54_2569 FORC54_2571 SM00849 Metallo-beta-lactamase superfamily FORC54_2572 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_2574 SM00354 helix_turn _helix lactose operon repressor FORC54_2580 SM00495 Chitin-binding domain type 3 FORC54_2600 SM00487 DEAD-like helicases superfamily FORC54_2600 SM00490 helicase superfamily c-terminal domain FORC54_2601 SM00670 Large family of predicted nucleotide-binding domains FORC54_2605 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_2610 SM00560 LamG-like jellyroll fold domain FORC54_2619 SM00382 ATPases associated with a variety of cellular activities FORC54_2620 SM00028 Tetratricopeptide repeats FORC54_2622 SM00965 Secretin and TonB N terminus short domain FORC54_2626 SM00052 Putative diguanylate phosphodiesterase FORC54_2626 SM00267 diguanylate cyclase FORC54_2628 SM00421 helix_turn_helix, Lux Regulon FORC54_2634 SM01018 B12 binding domain FORC54_2636 SM00091 PAS domain FORC54_2636 SM00267 diguanylate cyclase FORC54_2637 SM00897 FIST N domain FORC54_2637 SM01204 FORC54_2637 FORC54_2650 SM01005 Alanine racemase, C-terminal domain FORC54_2662 SM00965 Secretin and TonB N terminus short domain FORC54_2673 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC54_2681 SM00919 Malic enzyme, NAD binding domain FORC54_2681 SM01274 FORC54_2681 FORC54_2683 SM00487 DEAD-like helicases superfamily FORC54_2683 SM00490 helicase superfamily c-terminal domain FORC54_2684 SM00354 helix_turn _helix lactose operon repressor FORC54_2687 SM00382 ATPases associated with a variety of cellular activities FORC54_2687 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_2701 SM00838 Elongation factor G C-terminus FORC54_2701 SM00889 Elongation factor G, domain IV FORC54_2709 SM00320 WD40 repeats FORC54_2716 SM00382 ATPases associated with a variety of cellular activities FORC54_2721 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_2721 SM00419 helix_turn_helix, cAMP Regulatory protein FORC54_2722 SM01150 FORC54_2722 FORC54_2732 SM00967 RNA 2'-O ribose methyltransferase substrate binding FORC54_2733 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_2733 SM00357 Cold shock protein domain FORC54_2733 SM00955 FORC54_2733 FORC54_2737 SM00671 Sel1-like repeats. FORC54_2738 SM00788 Adenylosuccinate synthetase FORC54_2740 SM00244 prohibitin homologues FORC54_2741 SM00244 prohibitin homologues FORC54_2745 SM00853 MutL C terminal dimerisation domain FORC54_2745 SM01340 FORC54_2745 FORC54_2746 SM00257 Lysin motif FORC54_2746 SM00646 FORC54_2746 FORC54_2749 SM00479 FORC54_2749 FORC54_2756 SM00450 Rhodanese Homology Domain FORC54_2759 SM00971 Serine acetyltransferase, N-terminal FORC54_2771 SM00495 Chitin-binding domain type 3 FORC54_2772 SM00841 Elongation factor P, C-terminal FORC54_2772 SM01185 FORC54_2772 FORC54_2777 SM00883 Chaperonin 10 Kd subunit FORC54_2782 SM00448 cheY-homologous receiver domain FORC54_2782 SM00862 Transcriptional regulatory protein, C terminal FORC54_2783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2783 SM00387 Histidine kinase-like ATPases FORC54_2783 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2790 SM00421 helix_turn_helix, Lux Regulon FORC54_2790 SM00448 cheY-homologous receiver domain FORC54_2796 SM00387 Histidine kinase-like ATPases FORC54_2796 SM00388 His Kinase A (phosphoacceptor) domain FORC54_2796 SM00448 cheY-homologous receiver domain FORC54_2798 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_2799 SM00479 FORC54_2799 FORC54_2803 SM00878 Biotin carboxylase C-terminal domain FORC54_2807 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_2807 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_2807 SM01049 FORC54_2807 FORC54_2808 SM00422 helix_turn_helix, mercury resistance FORC54_2809 SM00798 AICARFT/IMPCHase bienzyme FORC54_2809 SM00851 MGS-like domain FORC54_2810 SM01209 FORC54_2810 FORC54_2810 SM01210 FORC54_2810 FORC54_2812 SM00411 bacterial (prokaryotic) histone like domain FORC54_2816 SM00986 Uracil DNA glycosylase superfamily FORC54_2816 SM00987 UreE urease accessory protein, C-terminal domain FORC54_2823 SM00663 RNA polymerase I subunit A N-terminus FORC54_2828 SM00649 Ribosomal protein L11/L12 FORC54_2829 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FORC54_2829 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FORC54_2836 SM00155 Phospholipase D. Active site motifs. FORC54_2839 SM00360 RNA recognition motif FORC54_2848 SM00382 ATPases associated with a variety of cellular activities FORC54_2873 SM00563 Phosphate acyltransferases FORC54_2878 SM00450 Rhodanese Homology Domain FORC54_2881 SM00382 ATPases associated with a variety of cellular activities FORC54_2882 SM00382 ATPases associated with a variety of cellular activities FORC54_2882 SM00962 SRP54-type protein, GTPase domain FORC54_2882 SM00963 SRP54-type protein, helical bundle domain FORC54_2893 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_2894 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC54_2901 SM01144 FORC54_2901 FORC54_2902 SM00052 Putative diguanylate phosphodiesterase FORC54_2902 SM00267 diguanylate cyclase FORC54_2902 SM00897 FIST N domain FORC54_2902 SM01204 FORC54_2902 FORC54_2909 SM01219 FORC54_2909 FORC54_2915 SM00028 Tetratricopeptide repeats FORC54_2923 SM00052 Putative diguanylate phosphodiesterase FORC54_2923 SM00091 PAS domain FORC54_2923 SM00267 diguanylate cyclase FORC54_2924 SM00344 helix_turn_helix ASNC type FORC54_2932 SM00354 helix_turn _helix lactose operon repressor FORC54_2933 SM00448 cheY-homologous receiver domain FORC54_2935 SM00220 Serine/Threonine protein kinases, catalytic domain FORC54_2945 SM00382 ATPases associated with a variety of cellular activities FORC54_2961 SM01001 AIR carboxylase FORC54_2966 SM00257 Lysin motif FORC54_2979 SM00563 Phosphate acyltransferases FORC54_2981 SM00382 ATPases associated with a variety of cellular activities FORC54_2989 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_2993 SM00382 ATPases associated with a variety of cellular activities FORC54_3001 SM00470 ParB-like nuclease domain FORC54_3004 SM01228 FORC54_3004 FORC54_3010 SM00382 ATPases associated with a variety of cellular activities FORC54_3012 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_3015 SM00382 ATPases associated with a variety of cellular activities FORC54_3016 SM00382 ATPases associated with a variety of cellular activities FORC54_3020 SM00387 Histidine kinase-like ATPases FORC54_3020 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3020 SM00448 cheY-homologous receiver domain FORC54_3025 SM00382 ATPases associated with a variety of cellular activities FORC54_3029 SM00387 Histidine kinase-like ATPases FORC54_3030 SM00448 cheY-homologous receiver domain FORC54_3030 SM00850 LytTr DNA-binding domain FORC54_3031 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3031 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3031 SM01049 FORC54_3031 FORC54_3046 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3046 SM01009 AlkA N-terminal domain FORC54_3054 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC54_3054 SM00495 Chitin-binding domain type 3 FORC54_3054 SM00636 FORC54_3054 FORC54_3060 SM00267 diguanylate cyclase FORC54_3061 SM00267 diguanylate cyclase FORC54_3062 SM00642 Alpha-amylase domain FORC54_3067 SM00642 Alpha-amylase domain FORC54_3068 SM00671 Sel1-like repeats. FORC54_3080 SM00100 Cyclic nucleotide-monophosphate binding domain FORC54_3080 SM00419 helix_turn_helix, cAMP Regulatory protein FORC54_3089 SM00421 helix_turn_helix, Lux Regulon FORC54_3093 SM00642 Alpha-amylase domain FORC54_3094 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3094 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3094 SM01358 FORC54_3094 FORC54_3095 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_3097 SM00344 helix_turn_helix ASNC type FORC54_3099 SM00495 Chitin-binding domain type 3 FORC54_3103 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3103 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3107 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_3113 SM00387 Histidine kinase-like ATPases FORC54_3113 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3114 SM00448 cheY-homologous receiver domain FORC54_3114 SM00862 Transcriptional regulatory protein, C terminal FORC54_3115 SM00267 diguanylate cyclase FORC54_3120 SM00354 helix_turn _helix lactose operon repressor FORC54_3125 SM00382 ATPases associated with a variety of cellular activities FORC54_3126 SM00354 helix_turn _helix lactose operon repressor FORC54_3132 SM00382 ATPases associated with a variety of cellular activities FORC54_3133 SM00382 ATPases associated with a variety of cellular activities FORC54_3135 SM00354 helix_turn _helix lactose operon repressor FORC54_3140 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3142 SM01217 FORC54_3142 FORC54_3151 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_3151 SM00267 diguanylate cyclase FORC54_3155 SM00354 helix_turn _helix lactose operon repressor FORC54_3157 SM00382 ATPases associated with a variety of cellular activities FORC54_3159 SM01038 Beta galactosidase small chain FORC54_3167 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_3167 SM00866 FORC54_3167 FORC54_3169 SM00872 Alpha mannosidase, middle domain FORC54_3173 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3173 SM00871 Bacterial transcription activator, effector binding domain FORC54_3178 SM00421 helix_turn_helix, Lux Regulon FORC54_3181 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3192 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC54_3194 SM00354 helix_turn _helix lactose operon repressor FORC54_3207 SM00357 Cold shock protein domain FORC54_3222 SM00849 Metallo-beta-lactamase superfamily FORC54_3226 SM00421 helix_turn_helix, Lux Regulon FORC54_3231 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC54_3232 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_3234 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_3234 SM00267 diguanylate cyclase FORC54_3236 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_3238 SM00642 Alpha-amylase domain FORC54_3243 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3243 SM00387 Histidine kinase-like ATPases FORC54_3243 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3244 SM00448 cheY-homologous receiver domain FORC54_3244 SM00862 Transcriptional regulatory protein, C terminal FORC54_3260 SM00014 Acid phosphatase homologues FORC54_3274 SM00267 diguanylate cyclase FORC54_3274 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_3281 SM00481 DNA polymerase alpha chain like domain FORC54_3284 SM00248 ankyrin repeats FORC54_3285 SM01060 FORC54_3285 FORC54_3296 SM00829 Enoylreductase FORC54_3316 SM00530 Helix-turn-helix XRE-family like proteins FORC54_3317 SM00530 Helix-turn-helix XRE-family like proteins FORC54_3355 SM00060 Fibronectin type 3 domain FORC54_3371 SM00849 Metallo-beta-lactamase superfamily FORC54_3379 SM00382 ATPases associated with a variety of cellular activities FORC54_3384 SM01057 Eukaryotic-type carbonic anhydrase FORC54_3387 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3387 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3391 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC54_3391 SM00245 tail specific protease FORC54_3394 SM00382 ATPases associated with a variety of cellular activities FORC54_3398 SM00267 diguanylate cyclase FORC54_3399 SM00028 Tetratricopeptide repeats FORC54_3403 SM00422 helix_turn_helix, mercury resistance FORC54_3405 SM00257 Lysin motif FORC54_3407 SM00487 DEAD-like helicases superfamily FORC54_3407 SM00490 helicase superfamily c-terminal domain FORC54_3413 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3413 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3418 SM00382 ATPases associated with a variety of cellular activities FORC54_3419 SM00267 diguanylate cyclase FORC54_3421 SM00028 Tetratricopeptide repeats FORC54_3421 SM00327 von Willebrand factor (vWF) type A domain FORC54_3422 SM00327 von Willebrand factor (vWF) type A domain FORC54_3426 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3426 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3428 SM00421 helix_turn_helix, Lux Regulon FORC54_3429 SM00421 helix_turn_helix, Lux Regulon FORC54_3431 SM00382 ATPases associated with a variety of cellular activities FORC54_3442 SM00382 ATPases associated with a variety of cellular activities FORC54_3450 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3453 SM00267 diguanylate cyclase FORC54_3465 SM00382 ATPases associated with a variety of cellular activities FORC54_3472 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC54_3476 SM00260 Two component signalling adaptor domain FORC54_3476 SM00448 cheY-homologous receiver domain FORC54_3479 SM00642 Alpha-amylase domain FORC54_3480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3481 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3481 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3500 SM00267 diguanylate cyclase FORC54_3500 SM01079 FORC54_3500 FORC54_3501 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3501 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3504 SM00267 diguanylate cyclase FORC54_3507 SM01266 FORC54_3507 FORC54_3512 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3514 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3517 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3517 SM00871 Bacterial transcription activator, effector binding domain FORC54_3527 SM00382 ATPases associated with a variety of cellular activities FORC54_3530 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_3530 SM00866 FORC54_3530 FORC54_3540 SM00936 Penicillin-binding protein 5, C-terminal domain FORC54_3544 SM00028 Tetratricopeptide repeats FORC54_3550 SM00382 ATPases associated with a variety of cellular activities FORC54_3567 SM00450 Rhodanese Homology Domain FORC54_3582 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3582 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3587 SM01022 FORC54_3587 FORC54_3588 SM00014 Acid phosphatase homologues FORC54_3595 SM00382 ATPases associated with a variety of cellular activities FORC54_3596 SM00327 von Willebrand factor (vWF) type A domain FORC54_3601 SM00382 ATPases associated with a variety of cellular activities FORC54_3605 SM00354 helix_turn _helix lactose operon repressor FORC54_3607 SM00260 Two component signalling adaptor domain FORC54_3607 SM00448 cheY-homologous receiver domain FORC54_3611 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_3611 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3629 SM00327 von Willebrand factor (vWF) type A domain FORC54_3636 SM00387 Histidine kinase-like ATPases FORC54_3637 SM00448 cheY-homologous receiver domain FORC54_3638 SM01266 FORC54_3638 FORC54_3646 SM00382 ATPases associated with a variety of cellular activities FORC54_3647 SM00422 helix_turn_helix, mercury resistance FORC54_3656 SM00851 MGS-like domain FORC54_3658 SM00073 Histidine Phosphotransfer domain FORC54_3658 SM00387 Histidine kinase-like ATPases FORC54_3658 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3658 SM00448 cheY-homologous receiver domain FORC54_3668 SM00487 DEAD-like helicases superfamily FORC54_3668 SM00490 helicase superfamily c-terminal domain FORC54_3669 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_3669 SM00387 Histidine kinase-like ATPases FORC54_3669 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3669 SM00448 cheY-homologous receiver domain FORC54_3670 SM00052 Putative diguanylate phosphodiesterase FORC54_3670 SM00421 helix_turn_helix, Lux Regulon FORC54_3670 SM00448 cheY-homologous receiver domain FORC54_3671 SM00448 cheY-homologous receiver domain FORC54_3673 SM00052 Putative diguanylate phosphodiesterase FORC54_3673 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_3673 SM00267 diguanylate cyclase FORC54_3674 SM00635 Bacterial Ig-like domain 2 FORC54_3677 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3678 SM00316 Ribosomal protein S1-like RNA-binding domain FORC54_3678 SM00357 Cold shock protein domain FORC54_3678 SM00955 FORC54_3678 FORC54_3679 SM00487 DEAD-like helicases superfamily FORC54_3679 SM00490 helicase superfamily c-terminal domain FORC54_3688 SM00327 von Willebrand factor (vWF) type A domain FORC54_3696 SM00028 Tetratricopeptide repeats FORC54_3697 SM00990 FORC54_3697 FORC54_3703 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_3712 SM00382 ATPases associated with a variety of cellular activities FORC54_3723 SM00382 ATPases associated with a variety of cellular activities FORC54_3727 SM00530 Helix-turn-helix XRE-family like proteins FORC54_3729 SM00020 Trypsin-like serine protease FORC54_3738 SM00354 helix_turn _helix lactose operon repressor FORC54_3742 SM00052 Putative diguanylate phosphodiesterase FORC54_3746 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3746 SM00387 Histidine kinase-like ATPases FORC54_3746 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3747 SM00448 cheY-homologous receiver domain FORC54_3749 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3750 SM00495 Chitin-binding domain type 3 FORC54_3750 SM00636 FORC54_3750 FORC54_3756 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_3758 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3760 SM00487 DEAD-like helicases superfamily FORC54_3760 SM00490 helicase superfamily c-terminal domain FORC54_3761 SM00052 Putative diguanylate phosphodiesterase FORC54_3764 SM00867 YceI-like domain FORC54_3765 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_3775 SM00782 PhnA Zinc-Ribbon FORC54_3784 SM00642 Alpha-amylase domain FORC54_3789 SM00271 DnaJ molecular chaperone homology domain FORC54_3792 SM00052 Putative diguanylate phosphodiesterase FORC54_3792 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC54_3792 SM00267 diguanylate cyclase FORC54_3795 SM00382 ATPases associated with a variety of cellular activities FORC54_3798 SM00797 Allophanate hydrolase subunit 2 FORC54_3799 SM00796 Allophanate hydrolase subunit 1 FORC54_3802 SM00091 PAS domain FORC54_3802 SM00267 diguanylate cyclase FORC54_3802 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3805 SM00881 CoA binding domain FORC54_3815 SM00448 cheY-homologous receiver domain FORC54_3815 SM00862 Transcriptional regulatory protein, C terminal FORC54_3816 SM00387 Histidine kinase-like ATPases FORC54_3816 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3819 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC54_3819 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC54_3822 SM00267 diguanylate cyclase FORC54_3824 SM00267 diguanylate cyclase FORC54_3824 SM00448 cheY-homologous receiver domain FORC54_3826 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_3828 SM00382 ATPases associated with a variety of cellular activities FORC54_3843 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC54_3845 SM00450 Rhodanese Homology Domain FORC54_3851 SM00342 helix_turn_helix, arabinose operon control protein FORC54_3855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3855 SM01049 FORC54_3855 FORC54_3857 SM00028 Tetratricopeptide repeats FORC54_3869 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3873 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3873 SM00387 Histidine kinase-like ATPases FORC54_3873 SM00388 His Kinase A (phosphoacceptor) domain FORC54_3873 SM00448 cheY-homologous receiver domain FORC54_3874 SM00138 Methyltransferase, chemotaxis proteins FORC54_3876 SM00267 diguanylate cyclase FORC54_3876 SM00448 cheY-homologous receiver domain FORC54_3879 SM00487 DEAD-like helicases superfamily FORC54_3879 SM00490 helicase superfamily c-terminal domain FORC54_3882 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC54_3884 SM00028 Tetratricopeptide repeats FORC54_3884 SM00267 diguanylate cyclase FORC54_3888 SM00382 ATPases associated with a variety of cellular activities FORC54_3891 SM01012 FORC54_3891 FORC54_3895 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC54_3898 SM00642 Alpha-amylase domain FORC54_3899 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3899 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3902 SM00458 Ricin-type beta-trefoil FORC54_3912 SM00248 ankyrin repeats FORC54_3915 SM00248 ankyrin repeats FORC54_3922 SM00382 ATPases associated with a variety of cellular activities FORC54_3922 SM01086 C-terminal, D2-small domain, of ClpB protein FORC54_3931 SM00331 Sigma factor PP2C-like phosphatases FORC54_3931 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FORC54_3937 SM00240 Forkhead associated domain FORC54_3938 SM00220 Serine/Threonine protein kinases, catalytic domain FORC54_3945 SM00052 Putative diguanylate phosphodiesterase FORC54_3945 SM00267 diguanylate cyclase FORC54_3956 SM00387 Histidine kinase-like ATPases FORC54_3957 SM00448 cheY-homologous receiver domain FORC54_3957 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_3961 SM00861 Transketolase, pyrimidine binding domain FORC54_3963 SM00893 Electron transfer flavoprotein domain FORC54_3964 SM00893 Electron transfer flavoprotein domain FORC54_3967 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_3967 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_3968 SM01005 Alanine racemase, C-terminal domain FORC54_3972 SM00382 ATPases associated with a variety of cellular activities FORC54_3974 SM00382 ATPases associated with a variety of cellular activities FORC54_3978 SM00953 FORC54_3978 FORC54_3979 SM00822 FORC54_3979 FORC54_3986 SM00422 helix_turn_helix, mercury resistance FORC54_3993 SM00357 Cold shock protein domain FORC54_3997 SM00829 Enoylreductase FORC54_4001 SM00421 helix_turn_helix, Lux Regulon FORC54_4001 SM00448 cheY-homologous receiver domain FORC54_4002 SM00387 Histidine kinase-like ATPases FORC54_4005 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_4005 SM00267 diguanylate cyclase FORC54_4008 SM00357 Cold shock protein domain FORC54_4009 SM01322 FORC54_4009 FORC54_4016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4016 SM01358 FORC54_4016 FORC54_4028 SM00852 Probable molybdopterin binding domain FORC54_4030 SM00450 Rhodanese Homology Domain FORC54_4031 SM00052 Putative diguanylate phosphodiesterase FORC54_4031 SM00267 diguanylate cyclase FORC54_4032 SM00636 FORC54_4032 FORC54_4035 SM00861 Transketolase, pyrimidine binding domain FORC54_4037 SM00052 Putative diguanylate phosphodiesterase FORC54_4037 SM00267 diguanylate cyclase FORC54_4037 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4038 SM00091 PAS domain FORC54_4038 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4054 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4058 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_4064 SM00052 Putative diguanylate phosphodiesterase FORC54_4064 SM00267 diguanylate cyclase FORC54_4070 SM00052 Putative diguanylate phosphodiesterase FORC54_4070 SM00267 diguanylate cyclase FORC54_4077 SM01119 FORC54_4077 FORC54_4080 SM00382 ATPases associated with a variety of cellular activities FORC54_4085 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_4089 SM00487 DEAD-like helicases superfamily FORC54_4089 SM00490 helicase superfamily c-terminal domain FORC54_4108 SM01240 FORC54_4108 FORC54_4112 SM00448 cheY-homologous receiver domain FORC54_4114 SM00421 helix_turn_helix, Lux Regulon FORC54_4114 SM00448 cheY-homologous receiver domain FORC54_4115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4115 SM00387 Histidine kinase-like ATPases FORC54_4118 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC54_4124 SM01130 FORC54_4124 FORC54_4135 SM00822 FORC54_4135 FORC54_4142 SM00344 helix_turn_helix ASNC type FORC54_4145 SM00387 Histidine kinase-like ATPases FORC54_4145 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4145 SM00448 cheY-homologous receiver domain FORC54_4154 SM00387 Histidine kinase-like ATPases FORC54_4154 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4154 SM00448 cheY-homologous receiver domain FORC54_4157 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC54_4160 SM00788 Adenylosuccinate synthetase FORC54_4164 SM00344 helix_turn_helix ASNC type FORC54_4167 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_4169 SM00387 Histidine kinase-like ATPases FORC54_4169 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4170 SM00448 cheY-homologous receiver domain FORC54_4170 SM00862 Transcriptional regulatory protein, C terminal FORC54_4172 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4175 SM00924 MgtE intracellular N domain FORC54_4176 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4176 SM00871 Bacterial transcription activator, effector binding domain FORC54_4181 SM00382 ATPases associated with a variety of cellular activities FORC54_4190 SM00327 von Willebrand factor (vWF) type A domain FORC54_4190 SM00609 Vault protein Inter-alpha-Trypsin domain FORC54_4191 SM00563 Phosphate acyltransferases FORC54_4194 SM00849 Metallo-beta-lactamase superfamily FORC54_4196 SM00052 Putative diguanylate phosphodiesterase FORC54_4201 SM00382 ATPases associated with a variety of cellular activities FORC54_4202 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_4206 SM00495 Chitin-binding domain type 3 FORC54_4207 SM00052 Putative diguanylate phosphodiesterase FORC54_4209 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_4210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4211 SM00062 Bacterial periplasmic substrate-binding proteins FORC54_4224 SM00830 Chorismate mutase type II FORC54_4232 SM00849 Metallo-beta-lactamase superfamily FORC54_4239 SM00382 ATPases associated with a variety of cellular activities FORC54_4241 SM00354 helix_turn _helix lactose operon repressor FORC54_4263 SM00382 ATPases associated with a variety of cellular activities FORC54_4269 SM01091 Transporter associated domain FORC54_4271 SM00382 ATPases associated with a variety of cellular activities FORC54_4272 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_4272 SM00091 PAS domain FORC54_4272 SM00267 diguanylate cyclase FORC54_4277 SM00421 helix_turn_helix, Lux Regulon FORC54_4284 SM00849 Metallo-beta-lactamase superfamily FORC54_4295 SM00642 Alpha-amylase domain FORC54_4312 SM00155 Phospholipase D. Active site motifs. FORC54_4318 SM00346 helix_turn_helix isocitrate lyase regulation FORC54_4319 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC54_4320 SM00479 FORC54_4320 FORC54_4322 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4337 SM00387 Histidine kinase-like ATPases FORC54_4337 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4337 SM00448 cheY-homologous receiver domain FORC54_4340 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4342 SM00422 helix_turn_helix, mercury resistance FORC54_4346 SM00267 diguanylate cyclase FORC54_4346 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4348 SM00838 Elongation factor G C-terminus FORC54_4348 SM00889 Elongation factor G, domain IV FORC54_4356 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4369 SM00487 DEAD-like helicases superfamily FORC54_4369 SM00490 helicase superfamily c-terminal domain FORC54_4380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4381 SM00073 Histidine Phosphotransfer domain FORC54_4381 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_4381 SM00091 PAS domain FORC54_4381 SM00387 Histidine kinase-like ATPases FORC54_4381 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4381 SM00448 cheY-homologous receiver domain FORC54_4382 SM00448 cheY-homologous receiver domain FORC54_4382 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC54_4388 SM00382 ATPases associated with a variety of cellular activities FORC54_4388 SM00448 cheY-homologous receiver domain FORC54_4389 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC54_4389 SM00387 Histidine kinase-like ATPases FORC54_4391 SM00849 Metallo-beta-lactamase superfamily FORC54_4393 SM00448 cheY-homologous receiver domain FORC54_4393 SM00862 Transcriptional regulatory protein, C terminal FORC54_4394 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4394 SM00387 Histidine kinase-like ATPases FORC54_4394 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4401 SM00267 diguanylate cyclase FORC54_4408 SM00479 FORC54_4408 FORC54_4409 SM00382 ATPases associated with a variety of cellular activities FORC54_4416 SM00382 ATPases associated with a variety of cellular activities FORC54_4419 SM00895 FORC54_4419 FORC54_4429 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_4429 SM01134 FORC54_4429 FORC54_4431 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_4431 SM01134 FORC54_4431 FORC54_4434 SM00849 Metallo-beta-lactamase superfamily FORC54_4438 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC54_4443 SM00671 Sel1-like repeats. FORC54_4450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4453 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4456 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4459 SM00354 helix_turn _helix lactose operon repressor FORC54_4462 SM00487 DEAD-like helicases superfamily FORC54_4462 SM00490 helicase superfamily c-terminal domain FORC54_4464 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC54_4464 SM00895 FORC54_4464 FORC54_4486 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC54_4486 SM01134 FORC54_4486 FORC54_4489 SM01007 Class II Aldolase and Adducin N-terminal domain FORC54_4491 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC54_4495 SM00382 ATPases associated with a variety of cellular activities FORC54_4497 SM00344 helix_turn_helix ASNC type FORC54_4503 SM00342 helix_turn_helix, arabinose operon control protein FORC54_4504 SM00421 helix_turn_helix, Lux Regulon FORC54_4506 SM00387 Histidine kinase-like ATPases FORC54_4506 SM00388 His Kinase A (phosphoacceptor) domain FORC54_4507 SM00448 cheY-homologous receiver domain FORC54_4510 SM00052 Putative diguanylate phosphodiesterase FORC54_4510 SM00267 diguanylate cyclase FORC54_4511 SM00382 ATPases associated with a variety of cellular activities FORC54_4515 SM00883 Chaperonin 10 Kd subunit FORC54_4522 SM00855 Phosphoglycerate mutase family FORC54_4530 SM00331 Sigma factor PP2C-like phosphatases FORC54_4530 SM00448 cheY-homologous receiver domain FORC54_4532 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4533 SM00448 cheY-homologous receiver domain FORC54_4535 SM00138 Methyltransferase, chemotaxis proteins FORC54_4536 SM00091 PAS domain FORC54_4536 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC54_4536 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC54_4537 SM00260 Two component signalling adaptor domain FORC54_4538 SM00260 Two component signalling adaptor domain FORC54_4539 SM00073 Histidine Phosphotransfer domain FORC54_4539 SM00260 Two component signalling adaptor domain FORC54_4539 SM00387 Histidine kinase-like ATPases FORC54_4539 SM01231 FORC54_4539 FORC54_4540 SM00448 cheY-homologous receiver domain FORC54_4543 SM00470 ParB-like nuclease domain FORC54_p007 SM00857 Resolvase, N terminal domain FORC54_p010 SM00857 Resolvase, N terminal domain FORC54_p018 SM00487 DEAD-like helicases superfamily FORC54_p018 SM00490 helicase superfamily c-terminal domain