locus-tag class description VVMO6_00001 PF01134 Glucose inhibited division protein A VVMO6_00001 PF13932 GidA associated domain VVMO6_00002 PF02527 rRNA small subunit methyltransferase G VVMO6_00003 PF13614 AAA domain VVMO6_00004 PF17762 HTH domain found in ParB protein VVMO6_00004 PF02195 ParB-like nuclease domain VVMO6_00005 PF03899 ATP synthase I chain VVMO6_00006 PF00119 ATP synthase A chain VVMO6_00007 PF00137 ATP synthase subunit C VVMO6_00008 PF00430 ATP synthase B/B' CF(0) VVMO6_00009 PF00213 ATP synthase delta (OSCP) subunit VVMO6_00010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VVMO6_00010 PF02874 ATP synthase alpha/beta family, beta-barrel domain VVMO6_00010 PF00306 ATP synthase alpha/beta chain, C terminal domain VVMO6_00011 PF00231 ATP synthase VVMO6_00012 PF02874 ATP synthase alpha/beta family, beta-barrel domain VVMO6_00012 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VVMO6_00013 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VVMO6_00013 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VVMO6_00014 PF12804 MobA-like NTP transferase domain VVMO6_00014 PF14602 Hexapeptide repeat of succinyl-transferase VVMO6_00014 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_00015 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00016 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_00017 PF07690 Major Facilitator Superfamily VVMO6_00018 PF03466 LysR substrate binding domain VVMO6_00018 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00019 PF00585 C-terminal regulatory domain of Threonine dehydratase VVMO6_00019 PF00291 Pyridoxal-phosphate dependent enzyme VVMO6_00020 PF00920 Dehydratase family VVMO6_00021 PF01063 Amino-transferase class IV VVMO6_00023 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VVMO6_00023 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VVMO6_00023 PF00205 Thiamine pyrophosphate enzyme, central domain VVMO6_00024 PF01078 Magnesium chelatase, subunit ChlI VVMO6_00024 PF13335 Magnesium chelatase, subunit ChlI C-terminal VVMO6_00026 PF01553 Acyltransferase VVMO6_00027 PF01323 DSBA-like thioredoxin domain VVMO6_00028 PF01636 Phosphotransferase enzyme family VVMO6_00029 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VVMO6_00029 PF12801 4Fe-4S binding domain VVMO6_00029 PF13746 4Fe-4S dicluster domain VVMO6_00030 PF06288 Protein of unknown function (DUF1040) VVMO6_00032 PF07070 SpoOM protein VVMO6_00033 PF03006 Haemolysin-III related VVMO6_00034 PF02386 Cation transport protein VVMO6_00035 PF02254 TrkA-N domain VVMO6_00035 PF02080 TrkA-C domain VVMO6_00036 PF01029 NusB family VVMO6_00036 PF01189 16S rRNA methyltransferase RsmB/F VVMO6_00037 PF00551 Formyl transferase VVMO6_00037 PF02911 Formyl transferase, C-terminal domain VVMO6_00038 PF01327 Polypeptide deformylase VVMO6_00040 PF02481 DNA recombination-mediator protein A VVMO6_00040 PF17782 DprA winged helix domain VVMO6_00041 PF04361 Protein of unknown function (DUF494) VVMO6_00042 PF01396 Topoisomerase DNA binding C4 zinc finger VVMO6_00043 PF02222 ATP-grasp domain VVMO6_00043 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VVMO6_00044 PF00731 AIR carboxylase VVMO6_00045 PF01300 Telomere recombination VVMO6_00046 PF01218 Coproporphyrinogen III oxidase VVMO6_00047 PF08501 Shikimate dehydrogenase substrate binding domain VVMO6_00047 PF01488 Shikimate / quinate 5-dehydrogenase VVMO6_00047 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VVMO6_00048 PF07369 Protein of unknown function (DUF1488) VVMO6_00049 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_00050 PF13358 DDE superfamily endonuclease VVMO6_00053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00053 PF03466 LysR substrate binding domain VVMO6_00054 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VVMO6_00054 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VVMO6_00055 PF04380 Membrane fusogenic activity VVMO6_00056 PF00873 AcrB/AcrD/AcrF family VVMO6_00057 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_00058 PF00440 Bacterial regulatory proteins, tetR family VVMO6_00059 PF00580 UvrD/REP helicase N-terminal domain VVMO6_00059 PF13361 UvrD-like helicase C-terminal domain VVMO6_00060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VVMO6_00062 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_00062 PF00005 ABC transporter VVMO6_00063 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_00065 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_00065 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00072 PF00069 Protein kinase domain VVMO6_00072 PF03793 PASTA domain VVMO6_00075 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VVMO6_00076 PF00920 Dehydratase family VVMO6_00077 PF01202 Shikimate kinase VVMO6_00078 PF02447 GntP family permease VVMO6_00079 PF01081 KDPG and KHG aldolase VVMO6_00082 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VVMO6_00082 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_00083 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VVMO6_00084 PF01432 Peptidase family M3 VVMO6_00085 PF01037 Lrp/AsnC ligand binding domain VVMO6_00086 PF00563 EAL domain VVMO6_00086 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00086 PF08448 PAS fold VVMO6_00088 PF04445 Putative SAM-dependent methyltransferase VVMO6_00090 PF00892 EamA-like transporter family VVMO6_00091 PF00582 Universal stress protein family VVMO6_00092 PF00210 Ferritin-like domain VVMO6_00093 PF10625 Universal stress protein B (UspB) VVMO6_00096 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VVMO6_00097 PF02602 Uroporphyrinogen-III synthase HemD VVMO6_00098 PF03900 Porphobilinogen deaminase, C-terminal domain VVMO6_00098 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VVMO6_00099 PF01295 Adenylate cyclase, class-I VVMO6_00099 PF12633 Adenylate cyclase NT domain VVMO6_00100 PF01491 Frataxin-like domain VVMO6_00102 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VVMO6_00102 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VVMO6_00103 PF01678 Diaminopimelate epimerase VVMO6_00105 PF00589 Phage integrase family VVMO6_00105 PF02899 Phage integrase, N-terminal SAM-like domain VVMO6_00106 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_00107 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00107 PF00563 EAL domain VVMO6_00107 PF10442 FIST C domain VVMO6_00107 PF08495 FIST N domain VVMO6_00112 PF12146 Serine aminopeptidase, S33 VVMO6_00113 PF01810 LysE type translocator VVMO6_00114 PF00563 EAL domain VVMO6_00114 PF08668 HDOD domain VVMO6_00115 PF01022 Bacterial regulatory protein, arsR family VVMO6_00116 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_00116 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VVMO6_00125 PF01914 MarC family integral membrane protein VVMO6_00128 PF00448 SRP54-type protein, GTPase domain VVMO6_00128 PF02881 SRP54-type protein, helical bundle domain VVMO6_00129 PF00005 ABC transporter VVMO6_00130 PF18075 FtsX extracellular domain VVMO6_00131 PF04542 Sigma-70 region 2 VVMO6_00131 PF00140 Sigma-70 factor, region 1.2 VVMO6_00131 PF04545 Sigma-70, region 4 VVMO6_00133 PF00581 Rhodanese-like domain VVMO6_00134 PF01694 Rhomboid family VVMO6_00134 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VVMO6_00135 PF03748 Flagellar basal body-associated protein FliL VVMO6_00136 PF04345 Chorismate lyase VVMO6_00137 PF01040 UbiA prenyltransferase family VVMO6_00139 PF01553 Acyltransferase VVMO6_00140 PF01726 LexA DNA binding domain VVMO6_00140 PF00717 Peptidase S24-like VVMO6_00142 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VVMO6_00142 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_00143 PF00440 Bacterial regulatory proteins, tetR family VVMO6_00145 PF05958 tRNA (Uracil-5-)-methyltransferase VVMO6_00146 PF00593 TonB dependent receptor VVMO6_00146 PF07715 TonB-dependent Receptor Plug Domain VVMO6_00148 PF01177 Asp/Glu/Hydantoin racemase VVMO6_00150 PF13358 DDE superfamily endonuclease VVMO6_00152 PF13091 PLD-like domain VVMO6_00154 PF01565 FAD binding domain VVMO6_00154 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VVMO6_00155 PF08279 HTH domain VVMO6_00155 PF02237 Biotin protein ligase C terminal domain VVMO6_00155 PF03099 Biotin/lipoate A/B protein ligase family VVMO6_00156 PF00485 Phosphoribulokinase / Uridine kinase family VVMO6_00157 PF00009 Elongation factor Tu GTP binding domain VVMO6_00157 PF03144 Elongation factor Tu domain 2 VVMO6_00157 PF03143 Elongation factor Tu C-terminal domain VVMO6_00158 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VVMO6_00159 PF02357 Transcription termination factor nusG VVMO6_00159 PF00467 KOW motif VVMO6_00160 PF03946 Ribosomal protein L11, N-terminal domain VVMO6_00160 PF00298 Ribosomal protein L11, RNA binding domain VVMO6_00161 PF00687 Ribosomal protein L1p/L10e family VVMO6_00162 PF00466 Ribosomal protein L10 VVMO6_00163 PF00542 Ribosomal protein L7/L12 C-terminal domain VVMO6_00163 PF16320 Ribosomal protein L7/L12 dimerisation domain VVMO6_00164 PF10385 RNA polymerase beta subunit external 1 domain VVMO6_00164 PF04560 RNA polymerase Rpb2, domain 7 VVMO6_00164 PF04561 RNA polymerase Rpb2, domain 2 VVMO6_00164 PF04563 RNA polymerase beta subunit VVMO6_00164 PF04565 RNA polymerase Rpb2, domain 3 VVMO6_00164 PF00562 RNA polymerase Rpb2, domain 6 VVMO6_00165 PF05000 RNA polymerase Rpb1, domain 4 VVMO6_00165 PF04983 RNA polymerase Rpb1, domain 3 VVMO6_00165 PF04997 RNA polymerase Rpb1, domain 1 VVMO6_00165 PF04998 RNA polymerase Rpb1, domain 5 VVMO6_00165 PF00623 RNA polymerase Rpb1, domain 2 VVMO6_00166 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VVMO6_00167 PF00293 NUDIX domain VVMO6_00167 PF09297 NADH pyrophosphatase zinc ribbon domain VVMO6_00170 PF01208 Uroporphyrinogen decarboxylase (URO-D) VVMO6_00171 PF03167 Uracil DNA glycosylase superfamily VVMO6_00172 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_00172 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_00173 PF04222 Protein of unknown function (DUF416) VVMO6_00174 PF00571 CBS domain VVMO6_00174 PF01595 Cyclin M transmembrane N-terminal domain VVMO6_00175 PF00216 Bacterial DNA-binding protein VVMO6_00177 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VVMO6_00177 PF02843 Phosphoribosylglycinamide synthetase, C domain VVMO6_00177 PF02844 Phosphoribosylglycinamide synthetase, N domain VVMO6_00178 PF02142 MGS-like domain VVMO6_00178 PF01808 AICARFT/IMPCHase bienzyme VVMO6_00179 PF13411 MerR HTH family regulatory protein VVMO6_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00180 PF17200 Single Cache domain 2 VVMO6_00180 PF00672 HAMP domain VVMO6_00181 PF02954 Bacterial regulatory protein, Fis family VVMO6_00182 PF01207 Dihydrouridine synthase (Dus) VVMO6_00184 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VVMO6_00184 PF00289 Biotin carboxylase, N-terminal domain VVMO6_00184 PF02785 Biotin carboxylase C-terminal domain VVMO6_00185 PF00364 Biotin-requiring enzyme VVMO6_00186 PF01220 Dehydroquinase class II VVMO6_00187 PF13193 AMP-binding enzyme C-terminal domain VVMO6_00187 PF00501 AMP-binding enzyme VVMO6_00187 PF16177 Acetyl-coenzyme A synthetase N-terminus VVMO6_00190 PF12832 MFS_1 like family VVMO6_00191 PF00672 HAMP domain VVMO6_00191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00191 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00191 PF01627 Hpt domain VVMO6_00191 PF00072 Response regulator receiver domain VVMO6_00193 PF00474 Sodium:solute symporter family VVMO6_00195 PF01914 MarC family integral membrane protein VVMO6_00196 PF00072 Response regulator receiver domain VVMO6_00196 PF00196 Bacterial regulatory proteins, luxR family VVMO6_00197 PF11412 Disulphide bond corrector protein DsbC VVMO6_00197 PF02683 Cytochrome C biogenesis protein transmembrane region VVMO6_00198 PF03605 Anaerobic c4-dicarboxylate membrane transporter VVMO6_00199 PF00206 Lyase VVMO6_00199 PF10415 Fumarase C C-terminus VVMO6_00200 PF04186 FxsA cytoplasmic membrane protein VVMO6_00201 PF00588 SpoU rRNA Methylase family VVMO6_00202 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VVMO6_00202 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VVMO6_00203 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00203 PF00672 HAMP domain VVMO6_00203 PF16527 Two-component sensor protein CpxA, periplasmic domain VVMO6_00204 PF00072 Response regulator receiver domain VVMO6_00204 PF00486 Transcriptional regulatory protein, C terminal VVMO6_00205 PF07813 LTXXQ motif family protein VVMO6_00206 PF01545 Cation efflux family VVMO6_00206 PF16916 Dimerisation domain of Zinc Transporter VVMO6_00207 PF00365 Phosphofructokinase VVMO6_00208 PF01554 MatE VVMO6_00209 PF00166 Chaperonin 10 Kd subunit VVMO6_00210 PF00118 TCP-1/cpn60 chaperonin family VVMO6_00212 PF02308 MgtC family VVMO6_00213 PF04055 Radical SAM superfamily VVMO6_00214 PF08207 Elongation factor P (EF-P) KOW-like domain VVMO6_00214 PF09285 Elongation factor P, C-terminal VVMO6_00214 PF01132 Elongation factor P (EF-P) OB domain VVMO6_00216 PF02313 Fumarate reductase subunit D VVMO6_00217 PF02300 Fumarate reductase subunit C VVMO6_00218 PF13183 4Fe-4S dicluster domain VVMO6_00218 PF13085 2Fe-2S iron-sulfur cluster binding domain VVMO6_00219 PF02910 Fumarate reductase flavoprotein C-term VVMO6_00219 PF00890 FAD binding domain VVMO6_00221 PF00152 tRNA synthetases class II (D, K and N) VVMO6_00222 PF08360 QacR-like protein, C-terminal region VVMO6_00222 PF00440 Bacterial regulatory proteins, tetR family VVMO6_00224 PF01551 Peptidase family M23 VVMO6_00225 PF06426 Serine acetyltransferase, N-terminal VVMO6_00225 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_00226 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VVMO6_00226 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VVMO6_00227 PF02556 Preprotein translocase subunit SecB VVMO6_00228 PF00581 Rhodanese-like domain VVMO6_00230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VVMO6_00230 PF01676 Metalloenzyme superfamily VVMO6_00232 PF00939 Sodium:sulfate symporter transmembrane region VVMO6_00233 PF02666 Phosphatidylserine decarboxylase VVMO6_00234 PF03193 RsgA GTPase VVMO6_00235 PF00929 Exonuclease VVMO6_00236 PF08331 Domain of unknown function (DUF1730) VVMO6_00237 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VVMO6_00238 PF01520 N-acetylmuramoyl-L-alanine amidase VVMO6_00239 PF08676 MutL C terminal dimerisation domain VVMO6_00239 PF01119 DNA mismatch repair protein, C-terminal domain VVMO6_00241 PF17209 Hfq protein VVMO6_00242 PF01926 50S ribosome-binding GTPase VVMO6_00242 PF13167 GTP-binding GTPase N-terminal VVMO6_00242 PF16360 GTP-binding GTPase Middle Region VVMO6_00243 PF12221 Bacterial membrane protein N terminal VVMO6_00243 PF01145 SPFH domain / Band 7 family VVMO6_00244 PF01145 SPFH domain / Band 7 family VVMO6_00245 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VVMO6_00246 PF00709 Adenylosuccinate synthetase VVMO6_00247 PF08238 Sel1 repeat VVMO6_00248 PF00970 Oxidoreductase FAD-binding domain VVMO6_00248 PF00042 Globin VVMO6_00248 PF00175 Oxidoreductase NAD-binding domain VVMO6_00249 PF02082 Transcriptional regulator VVMO6_00250 PF01979 Amidohydrolase family VVMO6_00251 PF17876 Cold shock domain VVMO6_00251 PF00575 S1 RNA binding domain VVMO6_00251 PF08461 Ribonuclease R winged-helix domain VVMO6_00251 PF08206 Ribonuclease B OB domain VVMO6_00251 PF00773 RNB domain VVMO6_00252 PF08032 RNA 2'-O ribose methyltransferase substrate binding VVMO6_00252 PF00588 SpoU rRNA Methylase family VVMO6_00253 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_00254 PF00579 tRNA synthetases class I (W and Y) VVMO6_00257 PF00117 Glutamine amidotransferase class-I VVMO6_00258 PF00202 Aminotransferase class-III VVMO6_00259 PF04958 Arginine N-succinyltransferase beta subunit VVMO6_00260 PF00171 Aldehyde dehydrogenase family VVMO6_00262 PF13545 Crp-like helix-turn-helix domain VVMO6_00262 PF00027 Cyclic nucleotide-binding domain VVMO6_00263 PF00485 Phosphoribulokinase / Uridine kinase family VVMO6_00264 PF06794 Uncharacterised protein family (UPF0270) VVMO6_00265 PF00561 alpha/beta hydrolase fold VVMO6_00267 PF12848 ABC transporter VVMO6_00267 PF00005 ABC transporter VVMO6_00268 PF02525 Flavodoxin-like fold VVMO6_00269 PF02254 TrkA-N domain VVMO6_00269 PF00999 Sodium/hydrogen exchanger family VVMO6_00271 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_00272 PF01112 Asparaginase VVMO6_00274 PF04102 SlyX VVMO6_00276 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_00276 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VVMO6_00277 PF08348 YheO-like PAS domain VVMO6_00277 PF13309 HTH domain VVMO6_00278 PF02635 DsrE/DsrF-like family VVMO6_00279 PF02635 DsrE/DsrF-like family VVMO6_00280 PF04077 DsrH like protein VVMO6_00281 PF00164 Ribosomal protein S12/S23 VVMO6_00282 PF00177 Ribosomal protein S7p/S5e VVMO6_00283 PF03144 Elongation factor Tu domain 2 VVMO6_00283 PF03764 Elongation factor G, domain IV VVMO6_00283 PF14492 Elongation Factor G, domain II VVMO6_00283 PF00009 Elongation factor Tu GTP binding domain VVMO6_00283 PF00679 Elongation factor G C-terminus VVMO6_00284 PF03143 Elongation factor Tu C-terminal domain VVMO6_00284 PF03144 Elongation factor Tu domain 2 VVMO6_00284 PF00009 Elongation factor Tu GTP binding domain VVMO6_00285 PF04324 BFD-like [2Fe-2S] binding domain VVMO6_00286 PF00210 Ferritin-like domain VVMO6_00287 PF16363 GDP-mannose 4,6 dehydratase VVMO6_00288 PF00121 Triosephosphate isomerase VVMO6_00293 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VVMO6_00294 PF06005 Cell division protein ZapB VVMO6_00295 PF03737 Aldolase/RraA VVMO6_00296 PF01040 UbiA prenyltransferase family VVMO6_00297 PF07724 AAA domain (Cdc48 subfamily) VVMO6_00297 PF10431 C-terminal, D2-small domain, of ClpB protein VVMO6_00297 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_00298 PF00227 Proteasome subunit VVMO6_00300 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00301 PF00270 DEAD/DEAH box helicase VVMO6_00301 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VVMO6_00301 PF18074 Primosomal protein N C-terminal domain VVMO6_00301 PF17764 3′ DNA-binding domain (3′BD) VVMO6_00301 PF00271 Helicase conserved C-terminal domain VVMO6_00302 PF01197 Ribosomal protein L31 VVMO6_00303 PF03949 Malic enzyme, NAD binding domain VVMO6_00303 PF00390 Malic enzyme, N-terminal domain VVMO6_00304 PF01340 Met Apo-repressor, MetJ VVMO6_00305 PF01053 Cys/Met metabolism PLP-dependent enzyme VVMO6_00306 PF00696 Amino acid kinase family VVMO6_00306 PF03447 Homoserine dehydrogenase, NAD binding domain VVMO6_00306 PF00742 Homoserine dehydrogenase VVMO6_00307 PF02219 Methylenetetrahydrofolate reductase VVMO6_00310 PF00311 Phosphoenolpyruvate carboxylase VVMO6_00311 PF07687 Peptidase dimerisation domain VVMO6_00311 PF01546 Peptidase family M20/M25/M40 VVMO6_00312 PF01118 Semialdehyde dehydrogenase, NAD binding domain VVMO6_00312 PF02774 Semialdehyde dehydrogenase, dimerisation domain VVMO6_00313 PF00696 Amino acid kinase family VVMO6_00314 PF00764 Arginosuccinate synthase VVMO6_00315 PF00583 Acetyltransferase (GNAT) family VVMO6_00315 PF14698 Argininosuccinate lyase C-terminal VVMO6_00315 PF00206 Lyase VVMO6_00317 PF03466 LysR substrate binding domain VVMO6_00317 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00318 PF17092 Penicillin-binding protein OB-like domain VVMO6_00318 PF00905 Penicillin binding protein transpeptidase domain VVMO6_00318 PF00912 Transglycosylase VVMO6_00323 PF11741 AMIN domain VVMO6_00323 PF00263 Bacterial type II and III secretion system protein VVMO6_00323 PF03958 Bacterial type II/III secretion system short domain VVMO6_00323 PF07660 Secretin and TonB N terminus short domain VVMO6_00324 PF01202 Shikimate kinase VVMO6_00325 PF01761 3-dehydroquinate synthase VVMO6_00327 PF02086 D12 class N6 adenine-specific DNA methyltransferase VVMO6_00328 PF00834 Ribulose-phosphate 3 epimerase family VVMO6_00329 PF01250 Ribosomal protein S6 VVMO6_00330 PF00436 Single-strand binding protein family VVMO6_00331 PF01084 Ribosomal protein S18 VVMO6_00332 PF03948 Ribosomal protein L9, C-terminal domain VVMO6_00332 PF01281 Ribosomal protein L9, N-terminal domain VVMO6_00334 PF00772 DnaB-like helicase N terminal domain VVMO6_00334 PF03796 DnaB-like helicase C terminal domain VVMO6_00335 PF01168 Alanine racemase, N-terminal domain VVMO6_00335 PF00842 Alanine racemase, C-terminal domain VVMO6_00337 PF01894 Uncharacterised protein family UPF0047 VVMO6_00338 PF00342 Phosphoglucose isomerase VVMO6_00340 PF01475 Ferric uptake regulator family VVMO6_00341 PF01207 Dihydrouridine synthase (Dus) VVMO6_00345 PF00175 Oxidoreductase NAD-binding domain VVMO6_00345 PF00258 Flavodoxin VVMO6_00345 PF00667 FAD binding domain VVMO6_00346 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VVMO6_00346 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VVMO6_00347 PF01507 Phosphoadenosine phosphosulfate reductase family VVMO6_00351 PF00072 Response regulator receiver domain VVMO6_00351 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00352 PF00999 Sodium/hydrogen exchanger family VVMO6_00353 PF02574 Homocysteine S-methyltransferase VVMO6_00353 PF02965 Vitamin B12 dependent methionine synthase, activation domain VVMO6_00353 PF02607 B12 binding domain VVMO6_00353 PF02310 B12 binding domain VVMO6_00353 PF00809 Pterin binding enzyme VVMO6_00354 PF01842 ACT domain VVMO6_00354 PF00696 Amino acid kinase family VVMO6_00355 PF00266 Aminotransferase class-V VVMO6_00357 PF00005 ABC transporter VVMO6_00357 PF17755 UvrA DNA-binding domain VVMO6_00357 PF17760 UvrA interaction domain VVMO6_00358 PF00483 Nucleotidyl transferase VVMO6_00359 PF00196 Bacterial regulatory proteins, luxR family VVMO6_00360 PF00436 Single-strand binding protein family VVMO6_00361 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00361 PF17157 Gammaproteobacterial periplasmic sensor domain VVMO6_00361 PF00563 EAL domain VVMO6_00365 PF07660 Secretin and TonB N terminus short domain VVMO6_00365 PF03958 Bacterial type II/III secretion system short domain VVMO6_00365 PF00263 Bacterial type II and III secretion system protein VVMO6_00365 PF11741 AMIN domain VVMO6_00366 PF01471 Putative peptidoglycan binding domain VVMO6_00366 PF13401 AAA domain VVMO6_00368 PF00437 Type II/IV secretion system protein VVMO6_00368 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VVMO6_00369 PF00482 Type II secretion system (T2SS), protein F VVMO6_00371 PF00114 Pilin (bacterial filament) VVMO6_00371 PF07963 Prokaryotic N-terminal methylation motif VVMO6_00372 PF08334 Type II secretion system (T2SS), protein G VVMO6_00372 PF07963 Prokaryotic N-terminal methylation motif VVMO6_00379 PF04085 rod shape-determining protein MreC VVMO6_00380 PF04093 rod shape-determining protein MreD VVMO6_00381 PF02545 Maf-like protein VVMO6_00382 PF00575 S1 RNA binding domain VVMO6_00382 PF10150 Ribonuclease E/G family VVMO6_00383 PF13116 Protein of unknown function VVMO6_00383 PF13502 AsmA-like C-terminal region VVMO6_00384 PF00795 Carbon-nitrogen hydrolase VVMO6_00385 PF01523 Putative modulator of DNA gyrase VVMO6_00386 PF13638 PIN domain VVMO6_00386 PF02562 PhoH-like protein VVMO6_00387 PF12137 RNA polymerase recycling family C-terminal VVMO6_00387 PF18337 RapA N-terminal Tudor like domain VVMO6_00387 PF00176 SNF2 family N-terminal domain VVMO6_00387 PF00271 Helicase conserved C-terminal domain VVMO6_00387 PF18339 RapA N-terminal Tudor like domain 1 VVMO6_00388 PF00849 RNA pseudouridylate synthase VVMO6_00389 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_00389 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_00390 PF01042 Endoribonuclease L-PSP VVMO6_00391 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VVMO6_00391 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VVMO6_00392 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VVMO6_00392 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VVMO6_00393 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VVMO6_00393 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VVMO6_00397 PF06877 Regulator of ribonuclease activity B VVMO6_00399 PF00583 Acetyltransferase (GNAT) family VVMO6_00401 PF05987 Bacterial protein of unknown function (DUF898) VVMO6_00403 PF10458 Valyl tRNA synthetase tRNA binding arm VVMO6_00403 PF00133 tRNA synthetases class I (I, L, M and V) VVMO6_00403 PF08264 Anticodon-binding domain of tRNA VVMO6_00404 PF04364 DNA polymerase III chi subunit, HolC VVMO6_00405 PF02789 Cytosol aminopeptidase family, N-terminal domain VVMO6_00405 PF00883 Cytosol aminopeptidase family, catalytic domain VVMO6_00406 PF03739 Lipopolysaccharide export system permease LptF/LptG VVMO6_00407 PF03739 Lipopolysaccharide export system permease LptF/LptG VVMO6_00409 PF01522 Polysaccharide deacetylase VVMO6_00411 PF02378 Phosphotransferase system, EIIC VVMO6_00412 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VVMO6_00413 PF02056 Family 4 glycosyl hydrolase VVMO6_00413 PF11975 Family 4 glycosyl hydrolase C-terminal domain VVMO6_00414 PF04794 YdjC-like protein VVMO6_00415 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00417 PF00072 Response regulator receiver domain VVMO6_00420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00420 PF08447 PAS fold VVMO6_00420 PF13426 PAS domain VVMO6_00421 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VVMO6_00421 PF01464 Transglycosylase SLT domain VVMO6_00422 PF04362 Bacterial Fe(2+) trafficking VVMO6_00423 PF00730 HhH-GPD superfamily base excision DNA repair protein VVMO6_00423 PF00633 Helix-hairpin-helix motif VVMO6_00423 PF14815 NUDIX domain VVMO6_00424 PF02390 Putative methyltransferase VVMO6_00425 PF04960 Glutaminase VVMO6_00427 PF04055 Radical SAM superfamily VVMO6_00427 PF06969 HemN C-terminal domain VVMO6_00428 PF01725 Ham1 family VVMO6_00430 PF02594 Uncharacterised ACR, YggU family COG1872 VVMO6_00431 PF02325 YGGT family VVMO6_00432 PF03807 NADP oxidoreductase coenzyme F420-dependent VVMO6_00432 PF14748 Pyrroline-5-carboxylate reductase dimerisation VVMO6_00433 PF01168 Alanine racemase, N-terminal domain VVMO6_00434 PF00437 Type II/IV secretion system protein VVMO6_00435 PF00437 Type II/IV secretion system protein VVMO6_00436 PF03652 Holliday junction resolvase VVMO6_00437 PF02622 Uncharacterized ACR, COG1678 VVMO6_00438 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VVMO6_00438 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VVMO6_00439 PF04452 RNA methyltransferase VVMO6_00441 PF04231 Endonuclease I VVMO6_00442 PF17283 SprT-like zinc ribbon domain VVMO6_00442 PF10263 SprT-like family VVMO6_00444 PF00438 S-adenosylmethionine synthetase, N-terminal domain VVMO6_00444 PF02772 S-adenosylmethionine synthetase, central domain VVMO6_00444 PF02773 S-adenosylmethionine synthetase, C-terminal domain VVMO6_00445 PF02780 Transketolase, C-terminal domain VVMO6_00445 PF00456 Transketolase, thiamine diphosphate binding domain VVMO6_00445 PF02779 Transketolase, pyrimidine binding domain VVMO6_00447 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VVMO6_00447 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_00448 PF00162 Phosphoglycerate kinase VVMO6_00449 PF01116 Fructose-bisphosphate aldolase class-II VVMO6_00450 PF05552 Conserved TM helix VVMO6_00450 PF00924 Mechanosensitive ion channel VVMO6_00451 PF01810 LysE type translocator VVMO6_00452 PF03466 LysR substrate binding domain VVMO6_00452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00454 PF01842 ACT domain VVMO6_00454 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_00454 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_00456 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VVMO6_00457 PF01812 5-formyltetrahydrofolate cyclo-ligase family VVMO6_00458 PF05164 Cell division protein ZapA VVMO6_00459 PF03695 Uncharacterised protein family (UPF0149) VVMO6_00460 PF01494 FAD binding domain VVMO6_00461 PF01494 FAD binding domain VVMO6_00464 PF01571 Aminomethyltransferase folate-binding domain VVMO6_00465 PF03937 Flavinator of succinate dehydrogenase VVMO6_00467 PF00890 FAD binding domain VVMO6_00467 PF02910 Fumarate reductase flavoprotein C-term VVMO6_00468 PF04542 Sigma-70 region 2 VVMO6_00468 PF08281 Sigma-70, region 4 VVMO6_00469 PF03873 Anti sigma-E protein RseA, C-terminal domain VVMO6_00469 PF03872 Anti sigma-E protein RseA, N-terminal domain VVMO6_00470 PF03888 MucB/RseB N-terminal domain VVMO6_00470 PF17188 MucB/RseB C-terminal domain VVMO6_00472 PF00679 Elongation factor G C-terminus VVMO6_00472 PF00009 Elongation factor Tu GTP binding domain VVMO6_00472 PF03144 Elongation factor Tu domain 2 VVMO6_00472 PF06421 GTP-binding protein LepA C-terminus VVMO6_00473 PF10502 Signal peptidase, peptidase S26 VVMO6_00474 PF14622 Ribonuclease-III-like VVMO6_00474 PF00035 Double-stranded RNA binding motif VVMO6_00475 PF07650 KH domain VVMO6_00475 PF01926 50S ribosome-binding GTPase VVMO6_00476 PF11967 Recombination protein O N terminal VVMO6_00476 PF02565 Recombination protein O C terminal VVMO6_00477 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VVMO6_00478 PF01648 4'-phosphopantetheinyl transferase superfamily VVMO6_00481 PF00563 EAL domain VVMO6_00481 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00483 PF01627 Hpt domain VVMO6_00483 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00483 PF00072 Response regulator receiver domain VVMO6_00483 PF00672 HAMP domain VVMO6_00483 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_00483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00484 PF01938 TRAM domain VVMO6_00484 PF05958 tRNA (Uracil-5-)-methyltransferase VVMO6_00485 PF13291 ACT domain VVMO6_00485 PF02824 TGS domain VVMO6_00485 PF04607 Region found in RelA / SpoT proteins VVMO6_00486 PF03819 MazG nucleotide pyrophosphohydrolase domain VVMO6_00487 PF06418 CTP synthase N-terminus VVMO6_00487 PF00117 Glutamine amidotransferase class-I VVMO6_00488 PF03952 Enolase, N-terminal domain VVMO6_00488 PF00113 Enolase, C-terminal TIM barrel domain VVMO6_00490 PF04977 Septum formation initiator VVMO6_00491 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VVMO6_00492 PF02542 YgbB family VVMO6_00493 PF01142 tRNA pseudouridine synthase D (TruD) VVMO6_00494 PF01975 Survival protein SurE VVMO6_00496 PF01551 Peptidase family M23 VVMO6_00496 PF01476 LysM domain VVMO6_00497 PF04542 Sigma-70 region 2 VVMO6_00497 PF04545 Sigma-70, region 4 VVMO6_00497 PF00140 Sigma-70 factor, region 1.2 VVMO6_00497 PF04539 Sigma-70 region 3 VVMO6_00498 PF00488 MutS domain V VVMO6_00498 PF05188 MutS domain II VVMO6_00498 PF01624 MutS domain I VVMO6_00498 PF05190 MutS family domain IV VVMO6_00498 PF05192 MutS domain III VVMO6_00499 PF02464 Competence-damaged protein VVMO6_00500 PF00154 recA bacterial DNA recombination protein VVMO6_00501 PF02631 RecX family VVMO6_00502 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VVMO6_00502 PF01411 tRNA synthetases class II (A) VVMO6_00502 PF02272 DHHA1 domain VVMO6_00503 PF13840 ACT domain VVMO6_00503 PF01842 ACT domain VVMO6_00503 PF00696 Amino acid kinase family VVMO6_00504 PF02599 Global regulator protein family VVMO6_00506 PF00682 HMGL-like VVMO6_00506 PF02436 Conserved carboxylase domain VVMO6_00506 PF00364 Biotin-requiring enzyme VVMO6_00507 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VVMO6_00508 PF08240 Alcohol dehydrogenase GroES-like domain VVMO6_00508 PF00107 Zinc-binding dehydrogenase VVMO6_00509 PF09335 SNARE associated Golgi protein VVMO6_00510 PF00675 Insulinase (Peptidase family M16) VVMO6_00510 PF05193 Peptidase M16 inactive domain VVMO6_00511 PF04262 Glutamate-cysteine ligase VVMO6_00513 PF02664 S-Ribosylhomocysteinase (LuxS) VVMO6_00514 PF01595 Cyclin M transmembrane N-terminal domain VVMO6_00514 PF03471 Transporter associated domain VVMO6_00514 PF00571 CBS domain VVMO6_00515 PF01578 Cytochrome C assembly protein VVMO6_00516 PF02978 Signal peptide binding domain VVMO6_00516 PF00448 SRP54-type protein, GTPase domain VVMO6_00516 PF02881 SRP54-type protein, helical bundle domain VVMO6_00517 PF00886 Ribosomal protein S16 VVMO6_00518 PF01782 RimM N-terminal domain VVMO6_00518 PF05239 PRC-barrel domain VVMO6_00519 PF01746 tRNA (Guanine-1)-methyltransferase VVMO6_00520 PF01245 Ribosomal protein L19 VVMO6_00521 PF03884 DNA gyrase inhibitor YacG VVMO6_00522 PF07072 Cell division protein VVMO6_00523 PF01121 Dephospho-CoA kinase VVMO6_00524 PF06750 Bacterial Peptidase A24 N-terminal domain VVMO6_00524 PF01478 Type IV leader peptidase family VVMO6_00525 PF00482 Type II secretion system (T2SS), protein F VVMO6_00526 PF00437 Type II/IV secretion system protein VVMO6_00526 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VVMO6_00527 PF07963 Prokaryotic N-terminal methylation motif VVMO6_00527 PF00114 Pilin (bacterial filament) VVMO6_00528 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VVMO6_00528 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VVMO6_00529 PF01510 N-acetylmuramoyl-L-alanine amidase VVMO6_00531 PF07729 FCD domain VVMO6_00531 PF00392 Bacterial regulatory proteins, gntR family VVMO6_00532 PF17831 Pyruvate dehydrogenase E1 component middle domain VVMO6_00532 PF00456 Transketolase, thiamine diphosphate binding domain VVMO6_00533 PF00364 Biotin-requiring enzyme VVMO6_00533 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VVMO6_00533 PF02817 e3 binding domain VVMO6_00534 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_00534 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VVMO6_00535 PF00440 Bacterial regulatory proteins, tetR family VVMO6_00536 PF00156 Phosphoribosyl transferase domain VVMO6_00537 PF00484 Carbonic anhydrase VVMO6_00538 PF01740 STAS domain VVMO6_00538 PF00916 Sulfate permease family VVMO6_00539 PF00005 ABC transporter VVMO6_00540 PF01061 ABC-2 type transporter VVMO6_00541 PF02569 Pantoate-beta-alanine ligase VVMO6_00542 PF02548 Ketopantoate hydroxymethyltransferase VVMO6_00543 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VVMO6_00544 PF12627 Probable RNA and SrmB- binding site of polymerase A VVMO6_00544 PF12626 Polymerase A arginine-rich C-terminus VVMO6_00544 PF01743 Poly A polymerase head domain VVMO6_00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain VVMO6_00546 PF01258 Prokaryotic dksA/traR C4-type zinc finger VVMO6_00547 PF03749 Sugar fermentation stimulation protein RE domain VVMO6_00547 PF17746 SfsA N-terminal OB domain VVMO6_00548 PF00271 Helicase conserved C-terminal domain VVMO6_00548 PF04408 Helicase associated domain (HA2) VVMO6_00548 PF00270 DEAD/DEAH box helicase VVMO6_00548 PF08482 ATP-dependent helicase C-terminal VVMO6_00549 PF14814 Bifunctional transglycosylase second domain VVMO6_00549 PF00905 Penicillin binding protein transpeptidase domain VVMO6_00549 PF00912 Transglycosylase VVMO6_00550 PF01734 Patatin-like phospholipase VVMO6_00551 PF11791 Aconitate B N-terminal domain VVMO6_00551 PF06434 Aconitate hydratase 2 N-terminus VVMO6_00551 PF00330 Aconitase family (aconitate hydratase) VVMO6_00552 PF02595 Glycerate kinase family VVMO6_00553 PF02447 GntP family permease VVMO6_00554 PF17853 GGDEF-like domain VVMO6_00554 PF13556 PucR C-terminal helix-turn-helix domain VVMO6_00554 PF05651 Putative sugar diacid recognition VVMO6_00555 PF06062 Uncharacterised protein family (UPF0231) VVMO6_00556 PF00543 Nitrogen regulatory protein P-II VVMO6_00557 PF00909 Ammonium Transporter Family VVMO6_00558 PF13416 Bacterial extracellular solute-binding protein VVMO6_00560 PF00005 ABC transporter VVMO6_00560 PF08402 TOBE domain VVMO6_00561 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VVMO6_00561 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VVMO6_00561 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VVMO6_00562 PF06165 Glycosyltransferase family 36 VVMO6_00562 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VVMO6_00563 PF00728 Glycosyl hydrolase family 20, catalytic domain VVMO6_00563 PF02838 Glycosyl hydrolase family 20, domain 2 VVMO6_00564 PF01869 BadF/BadG/BcrA/BcrD ATPase family VVMO6_00566 PF00005 ABC transporter VVMO6_00566 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_00567 PF00005 ABC transporter VVMO6_00567 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_00568 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_00568 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00569 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_00571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00571 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00571 PF09308 LuxQ, periplasmic VVMO6_00571 PF00072 Response regulator receiver domain VVMO6_00572 PF08468 Methyltransferase small domain N-terminal VVMO6_00572 PF05175 Methyltransferase small domain VVMO6_00573 PF01594 AI-2E family transporter VVMO6_00575 PF00202 Aminotransferase class-III VVMO6_00576 PF01521 Iron-sulphur cluster biosynthesis VVMO6_00577 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_00578 PF00873 AcrB/AcrD/AcrF family VVMO6_00579 PF01551 Peptidase family M23 VVMO6_00579 PF04225 Opacity-associated protein A LysM-like domain VVMO6_00580 PF00579 tRNA synthetases class I (W and Y) VVMO6_00581 PF04304 Protein of unknown function (DUF454) VVMO6_00582 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VVMO6_00583 PF13609 Gram-negative porin VVMO6_00585 PF01272 Transcription elongation factor, GreA/GreB, C-term VVMO6_00585 PF03449 Transcription elongation factor, N-terminal VVMO6_00586 PF01985 CRS1 / YhbY (CRM) domain VVMO6_00587 PF01728 FtsJ-like methyltransferase VVMO6_00588 PF17862 AAA+ lid domain VVMO6_00588 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_00588 PF06480 FtsH Extracellular VVMO6_00588 PF01434 Peptidase family M41 VVMO6_00589 PF00809 Pterin binding enzyme VVMO6_00590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VVMO6_00590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VVMO6_00590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VVMO6_00590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VVMO6_00592 PF03840 Preprotein translocase SecG subunit VVMO6_00593 PF17384 RimP C-terminal SH3 domain VVMO6_00593 PF02576 RimP N-terminal domain VVMO6_00594 PF00575 S1 RNA binding domain VVMO6_00594 PF08529 NusA N-terminal domain VVMO6_00594 PF13184 NusA-like KH domain VVMO6_00595 PF08364 Bacterial translation initiation factor IF-2 associated region VVMO6_00595 PF11987 Translation-initiation factor 2 VVMO6_00595 PF00009 Elongation factor Tu GTP binding domain VVMO6_00595 PF04760 Translation initiation factor IF-2, N-terminal region VVMO6_00596 PF02033 Ribosome-binding factor A VVMO6_00597 PF09157 Pseudouridine synthase II TruB, C-terminal VVMO6_00597 PF16198 tRNA pseudouridylate synthase B C-terminal domain VVMO6_00597 PF01509 TruB family pseudouridylate synthase (N terminal domain) VVMO6_00598 PF00312 Ribosomal protein S15 VVMO6_00605 PF03725 3' exoribonuclease family, domain 2 VVMO6_00605 PF00575 S1 RNA binding domain VVMO6_00605 PF01138 3' exoribonuclease family, domain 1 VVMO6_00605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VVMO6_00605 PF00013 KH domain VVMO6_00606 PF07719 Tetratricopeptide repeat VVMO6_00606 PF13181 Tetratricopeptide repeat VVMO6_00608 PF01554 MatE VVMO6_00611 PF03707 Bacterial signalling protein N terminal repeat VVMO6_00611 PF00563 EAL domain VVMO6_00611 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00613 PF13508 Acetyltransferase (GNAT) domain VVMO6_00615 PF00583 Acetyltransferase (GNAT) family VVMO6_00616 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00616 PF03707 Bacterial signalling protein N terminal repeat VVMO6_00616 PF00563 EAL domain VVMO6_00617 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00617 PF08448 PAS fold VVMO6_00618 PF16658 Class II release factor RF3, C-terminal domain VVMO6_00618 PF03144 Elongation factor Tu domain 2 VVMO6_00618 PF00009 Elongation factor Tu GTP binding domain VVMO6_00620 PF01026 TatD related DNase VVMO6_00621 PF01773 Na+ dependent nucleoside transporter N-terminus VVMO6_00621 PF07670 Nucleoside recognition VVMO6_00621 PF07662 Na+ dependent nucleoside transporter C-terminus VVMO6_00622 PF01791 DeoC/LacD family aldolase VVMO6_00623 PF00591 Glycosyl transferase family, a/b domain VVMO6_00623 PF02885 Glycosyl transferase family, helical bundle domain VVMO6_00623 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VVMO6_00624 PF01676 Metalloenzyme superfamily VVMO6_00625 PF01048 Phosphorylase superfamily VVMO6_00627 PF18429 Domain of unknown function (DUF5609) VVMO6_00629 PF18073 Rubredoxin metal binding domain VVMO6_00630 PF03707 Bacterial signalling protein N terminal repeat VVMO6_00630 PF00563 EAL domain VVMO6_00630 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00633 PF14492 Elongation Factor G, domain II VVMO6_00633 PF03144 Elongation factor Tu domain 2 VVMO6_00633 PF03764 Elongation factor G, domain IV VVMO6_00633 PF00009 Elongation factor Tu GTP binding domain VVMO6_00633 PF00679 Elongation factor G C-terminus VVMO6_00634 PF03466 LysR substrate binding domain VVMO6_00634 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00636 PF00501 AMP-binding enzyme VVMO6_00637 PF12833 Helix-turn-helix domain VVMO6_00637 PF02311 AraC-like ligand binding domain VVMO6_00643 PF04972 BON domain VVMO6_00643 PF00263 Bacterial type II and III secretion system protein VVMO6_00643 PF13629 Pilus formation protein N terminal region VVMO6_00649 PF00437 Type II/IV secretion system protein VVMO6_00653 PF02417 Chromate transporter VVMO6_00654 PF03466 LysR substrate binding domain VVMO6_00654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00656 PF01204 Trehalase VVMO6_00657 PF13520 Amino acid permease VVMO6_00658 PF13520 Amino acid permease VVMO6_00659 PF04074 YhcH/YjgK/YiaL VVMO6_00660 PF02929 Beta galactosidase small chain VVMO6_00660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VVMO6_00660 PF16353 Domain of unknown function(DUF4981) VVMO6_00660 PF00703 Glycosyl hydrolases family 2 VVMO6_00660 PF02837 Glycosyl hydrolases family 2, sugar binding domain VVMO6_00662 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00663 PF16363 GDP-mannose 4,6 dehydratase VVMO6_00664 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VVMO6_00664 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VVMO6_00665 PF10509 Galactokinase galactose-binding signature VVMO6_00665 PF00288 GHMP kinases N terminal domain VVMO6_00665 PF08544 GHMP kinases C terminal VVMO6_00666 PF01263 Aldose 1-epimerase VVMO6_00667 PF00672 HAMP domain VVMO6_00667 PF17200 Single Cache domain 2 VVMO6_00667 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00668 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00669 PF00356 Bacterial regulatory proteins, lacI family VVMO6_00670 PF01588 Putative tRNA binding domain VVMO6_00673 PF08443 RimK-like ATP-grasp domain VVMO6_00673 PF02080 TrkA-C domain VVMO6_00673 PF18030 RimK PreATP-grasp domain VVMO6_00675 PF01544 CorA-like Mg2+ transporter protein VVMO6_00676 PF01266 FAD dependent oxidoreductase VVMO6_00676 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VVMO6_00677 PF00455 DeoR C terminal sensor domain VVMO6_00677 PF08220 DeoR-like helix-turn-helix domain VVMO6_00678 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VVMO6_00678 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VVMO6_00679 PF00230 Major intrinsic protein VVMO6_00680 PF14602 Hexapeptide repeat of succinyl-transferase VVMO6_00680 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VVMO6_00682 PF07130 YebG protein VVMO6_00683 PF03466 LysR substrate binding domain VVMO6_00683 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00685 PF00884 Sulfatase VVMO6_00685 PF11893 Domain of unknown function (DUF3413) VVMO6_00686 PF17946 RecC C-terminal domain VVMO6_00687 PF13361 UvrD-like helicase C-terminal domain VVMO6_00687 PF00580 UvrD/REP helicase N-terminal domain VVMO6_00687 PF12705 PD-(D/E)XK nuclease superfamily VVMO6_00688 PF13538 UvrD-like helicase C-terminal domain VVMO6_00690 PF00583 Acetyltransferase (GNAT) family VVMO6_00690 PF00696 Amino acid kinase family VVMO6_00693 PF06725 3D domain VVMO6_00693 PF03562 MltA specific insert domain VVMO6_00694 PF00899 ThiF family VVMO6_00695 PF02657 Fe-S metabolism associated domain VVMO6_00696 PF00266 Aminotransferase class-V VVMO6_00697 PF01965 DJ-1/PfpI family VVMO6_00698 PF08546 Ketopantoate reductase PanE/ApbA C terminal VVMO6_00698 PF02558 Ketopantoate reductase PanE/ApbA VVMO6_00699 PF03502 Nucleoside-specific channel-forming protein, Tsx VVMO6_00702 PF04542 Sigma-70 region 2 VVMO6_00702 PF04545 Sigma-70, region 4 VVMO6_00704 PF07690 Major Facilitator Superfamily VVMO6_00705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VVMO6_00707 PF05175 Methyltransferase small domain VVMO6_00708 PF01722 BolA-like protein VVMO6_00709 PF11973 NQRA C-terminal domain VVMO6_00709 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VVMO6_00710 PF03116 NQR2, RnfD, RnfE family VVMO6_00711 PF04205 FMN-binding domain VVMO6_00712 PF02508 Rnf-Nqr subunit, membrane protein VVMO6_00713 PF02508 Rnf-Nqr subunit, membrane protein VVMO6_00714 PF00175 Oxidoreductase NAD-binding domain VVMO6_00714 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_00714 PF00970 Oxidoreductase FAD-binding domain VVMO6_00715 PF02424 ApbE family VVMO6_00717 PF00072 Response regulator receiver domain VVMO6_00717 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00718 PF00817 impB/mucB/samB family VVMO6_00718 PF11799 impB/mucB/samB family C-terminal domain VVMO6_00719 PF00570 HRDC domain VVMO6_00719 PF00270 DEAD/DEAH box helicase VVMO6_00719 PF16124 RecQ zinc-binding VVMO6_00719 PF09382 RQC domain VVMO6_00719 PF00271 Helicase conserved C-terminal domain VVMO6_00721 PF00041 Fibronectin type III domain VVMO6_00721 PF00704 Glycosyl hydrolases family 18 VVMO6_00722 PF00209 Sodium:neurotransmitter symporter family VVMO6_00724 PF06786 Uncharacterised protein family (UPF0253) VVMO6_00726 PF03129 Anticodon binding domain VVMO6_00726 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VVMO6_00726 PF04073 Aminoacyl-tRNA editing domain VVMO6_00727 PF01980 tRNA-methyltransferase O VVMO6_00727 PF18389 TrmO C-terminal domain VVMO6_00728 PF01197 Ribosomal protein L31 VVMO6_00729 PF00444 Ribosomal protein L36 VVMO6_00730 PF03806 AbgT putative transporter family VVMO6_00734 PF01370 NAD dependent epimerase/dehydratase family VVMO6_00736 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VVMO6_00741 PF04287 tRNA pseudouridine synthase C VVMO6_00742 PF00849 RNA pseudouridylate synthase VVMO6_00743 PF11944 Protein of unknown function (DUF3461) VVMO6_00744 PF08335 GlnD PII-uridylyltransferase VVMO6_00744 PF01909 Nucleotidyltransferase domain VVMO6_00744 PF01966 HD domain VVMO6_00745 PF00557 Metallopeptidase family M24 VVMO6_00746 PF00318 Ribosomal protein S2 VVMO6_00747 PF00889 Elongation factor TS VVMO6_00748 PF00696 Amino acid kinase family VVMO6_00749 PF01765 Ribosome recycling factor VVMO6_00750 PF01255 Putative undecaprenyl diphosphate synthase VVMO6_00752 PF13288 DXP reductoisomerase C-terminal domain VVMO6_00752 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VVMO6_00752 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VVMO6_00753 PF17820 PDZ domain VVMO6_00753 PF02163 Peptidase family M50 VVMO6_00754 PF01103 Surface antigen VVMO6_00754 PF07244 Surface antigen variable number repeat VVMO6_00755 PF03938 Outer membrane protein (OmpH-like) VVMO6_00756 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_00756 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VVMO6_00757 PF07977 FabA-like domain VVMO6_00758 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VVMO6_00758 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_00759 PF02684 Lipid-A-disaccharide synthetase VVMO6_00760 PF01351 Ribonuclease HII VVMO6_00761 PF01336 OB-fold nucleic acid binding domain VVMO6_00761 PF14579 Helix-hairpin-helix motif VVMO6_00761 PF07733 Bacterial DNA polymerase III alpha NTPase domain VVMO6_00761 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VVMO6_00761 PF02811 PHP domain VVMO6_00762 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VVMO6_00763 PF11734 TilS substrate C-terminal domain VVMO6_00763 PF01171 PP-loop family VVMO6_00763 PF09179 TilS substrate binding domain VVMO6_00764 PF00034 Cytochrome c VVMO6_00765 PF00543 Nitrogen regulatory protein P-II VVMO6_00766 PF03372 Endonuclease/Exonuclease/phosphatase family VVMO6_00768 PF01476 LysM domain VVMO6_00768 PF01464 Transglycosylase SLT domain VVMO6_00769 PF00753 Metallo-beta-lactamase superfamily VVMO6_00769 PF16123 Hydroxyacylglutathione hydrolase C-terminus VVMO6_00770 PF08241 Methyltransferase domain VVMO6_00771 PF00075 RNase H VVMO6_00772 PF00929 Exonuclease VVMO6_00774 PF02525 Flavodoxin-like fold VVMO6_00775 PF02254 TrkA-N domain VVMO6_00775 PF00999 Sodium/hydrogen exchanger family VVMO6_00780 PF02770 Acyl-CoA dehydrogenase, middle domain VVMO6_00780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VVMO6_00780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VVMO6_00780 PF09317 Domain of unknown function (DUF1974) VVMO6_00781 PF13580 SIS domain VVMO6_00782 PF13230 Glutamine amidotransferases class-II VVMO6_00783 PF00551 Formyl transferase VVMO6_00784 PF00586 AIR synthase related protein, N-terminal domain VVMO6_00784 PF02769 AIR synthase related protein, C-terminal domain VVMO6_00786 PF00860 Permease family VVMO6_00789 PF03358 NADPH-dependent FMN reductase VVMO6_00790 PF03960 ArsC family VVMO6_00791 PF01435 Peptidase family M48 VVMO6_00791 PF13181 Tetratricopeptide repeat VVMO6_00793 PF01594 AI-2E family transporter VVMO6_00794 PF00578 AhpC/TSA family VVMO6_00795 PF01842 ACT domain VVMO6_00796 PF00701 Dihydrodipicolinate synthetase family VVMO6_00800 PF01546 Peptidase family M20/M25/M40 VVMO6_00800 PF07687 Peptidase dimerisation domain VVMO6_00801 PF03960 ArsC family VVMO6_00806 PF04261 Dyp-type peroxidase family VVMO6_00807 PF00669 Bacterial flagellin N-terminal helical region VVMO6_00807 PF07196 Flagellin hook IN motif VVMO6_00807 PF00700 Bacterial flagellin C-terminal helical region VVMO6_00808 PF00669 Bacterial flagellin N-terminal helical region VVMO6_00808 PF00700 Bacterial flagellin C-terminal helical region VVMO6_00808 PF07196 Flagellin hook IN motif VVMO6_00809 PF00700 Bacterial flagellin C-terminal helical region VVMO6_00809 PF07196 Flagellin hook IN motif VVMO6_00809 PF00669 Bacterial flagellin N-terminal helical region VVMO6_00810 PF03646 FlaG protein VVMO6_00811 PF07196 Flagellin hook IN motif VVMO6_00811 PF07195 Flagellar hook-associated protein 2 C-terminus VVMO6_00811 PF02465 Flagellar hook-associated protein 2 N-terminus VVMO6_00813 PF02561 Flagellar protein FliS VVMO6_00814 PF00158 Sigma-54 interaction domain VVMO6_00814 PF00072 Response regulator receiver domain VVMO6_00814 PF02954 Bacterial regulatory protein, Fis family VVMO6_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00815 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00816 PF00072 Response regulator receiver domain VVMO6_00816 PF02954 Bacterial regulatory protein, Fis family VVMO6_00816 PF00158 Sigma-54 interaction domain VVMO6_00817 PF02049 Flagellar hook-basal body complex protein FliE VVMO6_00818 PF01514 Secretory protein of YscJ/FliF family VVMO6_00818 PF08345 Flagellar M-ring protein C-terminal VVMO6_00819 PF01706 FliG C-terminal domain VVMO6_00819 PF14842 FliG N-terminal domain VVMO6_00819 PF14841 FliG middle domain VVMO6_00821 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VVMO6_00821 PF18269 T3SS EscN ATPase C-terminal domain VVMO6_00825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VVMO6_00825 PF02154 Flagellar motor switch protein FliM VVMO6_00826 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VVMO6_00827 PF04347 Flagellar biosynthesis protein, FliO VVMO6_00828 PF00813 FliP family VVMO6_00829 PF01313 Bacterial export proteins, family 3 VVMO6_00830 PF01311 Bacterial export proteins, family 1 VVMO6_00831 PF01312 FlhB HrpN YscU SpaS Family VVMO6_00832 PF00771 FHIPEP family VVMO6_00833 PF00448 SRP54-type protein, GTPase domain VVMO6_00834 PF10609 NUBPL iron-transfer P-loop NTPase VVMO6_00835 PF04542 Sigma-70 region 2 VVMO6_00835 PF04545 Sigma-70, region 4 VVMO6_00835 PF04539 Sigma-70 region 3 VVMO6_00836 PF00072 Response regulator receiver domain VVMO6_00837 PF04344 Chemotaxis phosphatase, CheZ VVMO6_00838 PF07194 P2 response regulator binding domain VVMO6_00838 PF01627 Hpt domain VVMO6_00838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00838 PF02895 Signal transducing histidine kinase, homodimeric domain VVMO6_00838 PF01584 CheW-like domain VVMO6_00839 PF01339 CheB methylesterase VVMO6_00839 PF00072 Response regulator receiver domain VVMO6_00840 PF13614 AAA domain VVMO6_00842 PF01584 CheW-like domain VVMO6_00844 PF00005 ABC transporter VVMO6_00845 PF03379 CcmB protein VVMO6_00846 PF01578 Cytochrome C assembly protein VVMO6_00847 PF04995 Heme exporter protein D (CcmD) VVMO6_00848 PF03100 CcmE VVMO6_00849 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VVMO6_00849 PF01578 Cytochrome C assembly protein VVMO6_00850 PF08534 Redoxin VVMO6_00851 PF03918 Cytochrome C biogenesis protein VVMO6_00852 PF03918 Cytochrome C biogenesis protein VVMO6_00853 PF04333 MlaA lipoprotein VVMO6_00854 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VVMO6_00855 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VVMO6_00857 PF08281 Sigma-70, region 4 VVMO6_00857 PF04542 Sigma-70 region 2 VVMO6_00858 PF02803 Thiolase, C-terminal domain VVMO6_00858 PF00108 Thiolase, N-terminal domain VVMO6_00859 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VVMO6_00859 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_00859 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VVMO6_00860 PF00675 Insulinase (Peptidase family M16) VVMO6_00860 PF05193 Peptidase M16 inactive domain VVMO6_00862 PF00300 Histidine phosphatase superfamily (branch 1) VVMO6_00863 PF01713 Smr domain VVMO6_00864 PF05175 Methyltransferase small domain VVMO6_00865 PF01264 Chorismate synthase VVMO6_00866 PF03458 UPF0126 domain VVMO6_00867 PF04315 Elongation factor P hydroxylase VVMO6_00868 PF08891 YfcL protein VVMO6_00869 PF01266 FAD dependent oxidoreductase VVMO6_00869 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VVMO6_00870 PF02801 Beta-ketoacyl synthase, C-terminal domain VVMO6_00870 PF00109 Beta-ketoacyl synthase, N-terminal domain VVMO6_00871 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_00871 PF11890 Domain of unknown function (DUF3410) VVMO6_00871 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_00872 PF01118 Semialdehyde dehydrogenase, NAD binding domain VVMO6_00872 PF02774 Semialdehyde dehydrogenase, dimerisation domain VVMO6_00874 PF01416 tRNA pseudouridine synthase VVMO6_00875 PF17848 Acetyl-coA carboxylase zinc finger domain VVMO6_00875 PF01039 Carboxyl transferase domain VVMO6_00876 PF08245 Mur ligase middle domain VVMO6_00876 PF02875 Mur ligase family, glutamate ligase domain VVMO6_00877 PF05036 Sporulation related domain VVMO6_00878 PF02674 Colicin V production protein VVMO6_00879 PF00156 Phosphoribosyl transferase domain VVMO6_00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_00880 PF03466 LysR substrate binding domain VVMO6_00881 PF00072 Response regulator receiver domain VVMO6_00885 PF00156 Phosphoribosyl transferase domain VVMO6_00886 PF12170 DNA polymerase III tau subunit V interacting with alpha VVMO6_00886 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VVMO6_00886 PF12169 DNA polymerase III subunits gamma and tau domain III VVMO6_00887 PF02575 YbaB/EbfC DNA-binding family VVMO6_00888 PF02132 RecR protein VVMO6_00888 PF13662 Toprim domain VVMO6_00891 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_00891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_00891 PF00672 HAMP domain VVMO6_00892 PF00486 Transcriptional regulatory protein, C terminal VVMO6_00892 PF00072 Response regulator receiver domain VVMO6_00893 PF00230 Major intrinsic protein VVMO6_00894 PF03692 Putative zinc- or iron-chelating domain VVMO6_00895 PF03692 Putative zinc- or iron-chelating domain VVMO6_00897 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_00899 PF00245 Alkaline phosphatase VVMO6_00903 PF13847 Methyltransferase domain VVMO6_00904 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VVMO6_00904 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VVMO6_00910 PF01420 Type I restriction modification DNA specificity domain VVMO6_00911 PF12161 HsdM N-terminal domain VVMO6_00911 PF02384 N-6 DNA Methylase VVMO6_00914 PF00271 Helicase conserved C-terminal domain VVMO6_00914 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VVMO6_00914 PF04851 Type III restriction enzyme, res subunit VVMO6_00914 PF08463 EcoEI R protein C-terminal VVMO6_00921 PF01966 HD domain VVMO6_00921 PF13286 Phosphohydrolase-associated domain VVMO6_00922 PF01381 Helix-turn-helix VVMO6_00923 PF13657 HipA N-terminal domain VVMO6_00923 PF07804 HipA-like C-terminal domain VVMO6_00925 PF03448 MgtE intracellular N domain VVMO6_00925 PF01769 Divalent cation transporter VVMO6_00925 PF00571 CBS domain VVMO6_00926 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00928 PF02743 Cache domain VVMO6_00928 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00928 PF00672 HAMP domain VVMO6_00930 PF18500 CadC C-terminal domain 1 VVMO6_00930 PF00486 Transcriptional regulatory protein, C terminal VVMO6_00933 PF13520 Amino acid permease VVMO6_00934 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VVMO6_00934 PF01276 Orn/Lys/Arg decarboxylase, major domain VVMO6_00934 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VVMO6_00935 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00936 PF07085 DRTGG domain VVMO6_00936 PF00571 CBS domain VVMO6_00936 PF00392 Bacterial regulatory proteins, gntR family VVMO6_00936 PF03061 Thioesterase superfamily VVMO6_00937 PF00403 Heavy-metal-associated domain VVMO6_00938 PF01048 Phosphorylase superfamily VVMO6_00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00940 PF00672 HAMP domain VVMO6_00941 PF01230 HIT domain VVMO6_00944 PF13036 Peptidoglycan-synthase activator LpoB VVMO6_00944 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VVMO6_00946 PF05728 Uncharacterised protein family (UPF0227) VVMO6_00947 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_00950 PF03461 TRCF domain VVMO6_00950 PF02559 CarD-like/TRCF domain VVMO6_00950 PF00270 DEAD/DEAH box helicase VVMO6_00950 PF00271 Helicase conserved C-terminal domain VVMO6_00950 PF17757 UvrB interaction domain VVMO6_00952 PF02687 FtsX-like permease family VVMO6_00952 PF12704 MacB-like periplasmic core domain VVMO6_00953 PF00005 ABC transporter VVMO6_00954 PF12704 MacB-like periplasmic core domain VVMO6_00954 PF02687 FtsX-like permease family VVMO6_00956 PF03772 Competence protein VVMO6_00956 PF00753 Metallo-beta-lactamase superfamily VVMO6_00956 PF13567 Domain of unknown function (DUF4131) VVMO6_00957 PF00005 ABC transporter VVMO6_00957 PF00664 ABC transporter transmembrane region VVMO6_00958 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VVMO6_00959 PF03966 Trm112p-like protein VVMO6_00960 PF02348 Cytidylyltransferase VVMO6_00961 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_00961 PF17155 Gammaproteobacterial periplasmic sensor domain VVMO6_00962 PF04293 SpoVR like protein VVMO6_00963 PF04285 Protein of unknown function (DUF444) VVMO6_00964 PF06798 PrkA serine protein kinase C-terminal domain VVMO6_00964 PF08298 PrkA AAA domain VVMO6_00966 PF03887 YfbU domain VVMO6_00968 PF04055 Radical SAM superfamily VVMO6_00969 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00969 PF00672 HAMP domain VVMO6_00971 PF01228 Glycine radical VVMO6_00971 PF02901 Pyruvate formate lyase-like VVMO6_00974 PF00005 ABC transporter VVMO6_00975 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_00976 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00977 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_00979 PF03372 Endonuclease/Exonuclease/phosphatase family VVMO6_00980 PF02743 Cache domain VVMO6_00980 PF00672 HAMP domain VVMO6_00980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_00981 PF10689 Protein of unknown function (DUF2496) VVMO6_00982 PF07445 Primosomal replication protein priC VVMO6_00983 PF01925 Sulfite exporter TauE/SafE VVMO6_00984 PF13307 Helicase C-terminal domain VVMO6_00984 PF06733 DEAD_2 VVMO6_00985 PF13609 Gram-negative porin VVMO6_00986 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VVMO6_00987 PF00849 RNA pseudouridylate synthase VVMO6_00988 PF03971 Monomeric isocitrate dehydrogenase VVMO6_00989 PF00313 'Cold-shock' DNA-binding domain VVMO6_00990 PF02617 ATP-dependent Clp protease adaptor protein ClpS VVMO6_00991 PF17871 AAA lid domain VVMO6_00991 PF02861 Clp amino terminal domain, pathogenicity island component VVMO6_00991 PF07724 AAA domain (Cdc48 subfamily) VVMO6_00991 PF10431 C-terminal, D2-small domain, of ClpB protein VVMO6_00991 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_00992 PF01176 Translation initiation factor 1A / IF-1 VVMO6_00993 PF04377 Arginine-tRNA-protein transferase, C terminus VVMO6_00993 PF04376 Arginine-tRNA-protein transferase, N terminus VVMO6_00994 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VVMO6_00996 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VVMO6_00997 PF10692 Protein of unknown function (DUF2498) VVMO6_00999 PF01131 DNA topoisomerase VVMO6_00999 PF08272 Topoisomerase I zinc-ribbon-like VVMO6_00999 PF01751 Toprim domain VVMO6_00999 PF01396 Topoisomerase DNA binding C4 zinc finger VVMO6_01000 PF00483 Nucleotidyl transferase VVMO6_01001 PF00534 Glycosyl transferases group 1 VVMO6_01001 PF08323 Starch synthase catalytic domain VVMO6_01002 PF00561 alpha/beta hydrolase fold VVMO6_01005 PF04993 TfoX N-terminal domain VVMO6_01005 PF04994 TfoX C-terminal domain VVMO6_01006 PF00356 Bacterial regulatory proteins, lacI family VVMO6_01007 PF02613 Nitrate reductase delta subunit VVMO6_01008 PF00072 Response regulator receiver domain VVMO6_01008 PF00486 Transcriptional regulatory protein, C terminal VVMO6_01009 PF02698 DUF218 domain VVMO6_01011 PF17193 MukF C-terminal domain VVMO6_01011 PF03882 MukF winged-helix domain VVMO6_01011 PF17192 MukF middle domain VVMO6_01012 PF04288 MukE-like family VVMO6_01013 PF16330 MukB hinge domain VVMO6_01013 PF04310 MukB N-terminal VVMO6_01014 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VVMO6_01014 PF12833 Helix-turn-helix domain VVMO6_01015 PF00171 Aldehyde dehydrogenase family VVMO6_01016 PF05199 GMC oxidoreductase VVMO6_01016 PF00732 GMC oxidoreductase VVMO6_01019 PF18030 RimK PreATP-grasp domain VVMO6_01019 PF08443 RimK-like ATP-grasp domain VVMO6_01020 PF08003 Protein of unknown function (DUF1698) VVMO6_01021 PF13649 Methyltransferase domain VVMO6_01023 PF02938 GAD domain VVMO6_01023 PF00152 tRNA synthetases class II (D, K and N) VVMO6_01023 PF01336 OB-fold nucleic acid binding domain VVMO6_01024 PF02075 Crossover junction endodeoxyribonuclease RuvC VVMO6_01025 PF02203 Tar ligand binding domain homologue VVMO6_01025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01025 PF00672 HAMP domain VVMO6_01026 PF07499 RuvA, C-terminal domain VVMO6_01026 PF01330 RuvA N terminal domain VVMO6_01027 PF17864 RuvB AAA lid domain VVMO6_01027 PF05491 RuvB C-terminal winged helix domain VVMO6_01027 PF05496 Holliday junction DNA helicase RuvB P-loop domain VVMO6_01029 PF01654 Cytochrome bd terminal oxidase subunit I VVMO6_01030 PF02322 Cytochrome bd terminal oxidase subunit II VVMO6_01032 PF03061 Thioesterase superfamily VVMO6_01033 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_01034 PF02472 Biopolymer transport protein ExbD/TolR VVMO6_01036 PF07676 WD40-like Beta Propeller Repeat VVMO6_01036 PF04052 TolB amino-terminal domain VVMO6_01037 PF00691 OmpA family VVMO6_01038 PF13174 Tetratricopeptide repeat VVMO6_01038 PF16331 TolA binding protein trimerisation VVMO6_01039 PF02445 Quinolinate synthetase A protein VVMO6_01041 PF03994 Domain of Unknown Function (DUF350) VVMO6_01043 PF03738 Glutathionylspermidine synthase preATP-grasp VVMO6_01046 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01046 PF00072 Response regulator receiver domain VVMO6_01046 PF09308 LuxQ, periplasmic VVMO6_01046 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01047 PF06610 L-alanine exporter VVMO6_01061 PF04229 GrpB protein VVMO6_01064 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_01065 PF00672 HAMP domain VVMO6_01065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01065 PF12729 Four helix bundle sensory module for signal transduction VVMO6_01067 PF08220 DeoR-like helix-turn-helix domain VVMO6_01067 PF00455 DeoR C terminal sensor domain VVMO6_01068 PF07690 Major Facilitator Superfamily VVMO6_01069 PF07882 L-fucose isomerase, second N-terminal domain VVMO6_01069 PF07881 L-fucose isomerase, first N-terminal domain VVMO6_01069 PF02952 L-fucose isomerase, C-terminal domain VVMO6_01070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VVMO6_01070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VVMO6_01071 PF05025 RbsD / FucU transport protein family VVMO6_01072 PF00596 Class II Aldolase and Adducin N-terminal domain VVMO6_01073 PF00465 Iron-containing alcohol dehydrogenase VVMO6_01074 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_01074 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_01076 PF03741 Integral membrane protein TerC family VVMO6_01083 PF02311 AraC-like ligand binding domain VVMO6_01083 PF12833 Helix-turn-helix domain VVMO6_01084 PF01740 STAS domain VVMO6_01084 PF00916 Sulfate permease family VVMO6_01086 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01086 PF00563 EAL domain VVMO6_01086 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01087 PF11842 Domain of unknown function (DUF3362) VVMO6_01087 PF04055 Radical SAM superfamily VVMO6_01087 PF08497 Radical SAM N-terminal VVMO6_01088 PF00563 EAL domain VVMO6_01088 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01088 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01089 PF00563 EAL domain VVMO6_01089 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01089 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01093 PF03466 LysR substrate binding domain VVMO6_01093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_01094 PF08267 Cobalamin-independent synthase, N-terminal domain VVMO6_01094 PF01717 Cobalamin-independent synthase, Catalytic domain VVMO6_01095 PF01515 Phosphate acetyl/butaryl transferase VVMO6_01095 PF07085 DRTGG domain VVMO6_01096 PF00871 Acetokinase family VVMO6_01097 PF04217 Protein of unknown function, DUF412 VVMO6_01099 PF02653 Branched-chain amino acid transport system / permease component VVMO6_01100 PF00005 ABC transporter VVMO6_01101 PF00128 Alpha amylase, catalytic domain VVMO6_01101 PF02903 Alpha amylase, N-terminal ig-like domain VVMO6_01102 PF00072 Response regulator receiver domain VVMO6_01102 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01103 PF01207 Dihydrouridine synthase (Dus) VVMO6_01104 PF07516 SecA Wing and Scaffold domain VVMO6_01104 PF07517 SecA DEAD-like domain VVMO6_01104 PF02810 SEC-C motif VVMO6_01104 PF01043 SecA preprotein cross-linking domain VVMO6_01105 PF02600 Disulfide bond formation protein DsbB VVMO6_01106 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VVMO6_01107 PF07840 FadR C-terminal domain VVMO6_01107 PF00392 Bacterial regulatory proteins, gntR family VVMO6_01108 PF00925 GTP cyclohydrolase II VVMO6_01109 PF01609 Transposase DDE domain VVMO6_01109 PF13006 Insertion element 4 transposase N-terminal VVMO6_01110 PF03480 Bacterial extracellular solute-binding protein, family 7 VVMO6_01112 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VVMO6_01113 PF17200 Single Cache domain 2 VVMO6_01113 PF07730 Histidine kinase VVMO6_01114 PF00072 Response regulator receiver domain VVMO6_01114 PF00196 Bacterial regulatory proteins, luxR family VVMO6_01115 PF01047 MarR family VVMO6_01116 PF02028 BCCT, betaine/carnitine/choline family transporter VVMO6_01117 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01117 PF02743 Cache domain VVMO6_01117 PF00672 HAMP domain VVMO6_01122 PF00155 Aminotransferase class I and II VVMO6_01123 PF01966 HD domain VVMO6_01123 PF00672 HAMP domain VVMO6_01126 PF00155 Aminotransferase class I and II VVMO6_01126 PF00392 Bacterial regulatory proteins, gntR family VVMO6_01128 PF00152 tRNA synthetases class II (D, K and N) VVMO6_01128 PF01336 OB-fold nucleic acid binding domain VVMO6_01129 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01129 PF00672 HAMP domain VVMO6_01129 PF17200 Single Cache domain 2 VVMO6_01130 PF01242 6-pyruvoyl tetrahydropterin synthase VVMO6_01132 PF00563 EAL domain VVMO6_01132 PF04940 Sensors of blue-light using FAD VVMO6_01133 PF03313 Serine dehydratase alpha chain VVMO6_01133 PF03315 Serine dehydratase beta chain VVMO6_01134 PF03222 Tryptophan/tyrosine permease family VVMO6_01135 PF00293 NUDIX domain VVMO6_01137 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01137 PF09308 LuxQ, periplasmic VVMO6_01137 PF00072 Response regulator receiver domain VVMO6_01139 PF00425 chorismate binding enzyme VVMO6_01139 PF04715 Anthranilate synthase component I, N terminal region VVMO6_01142 PF04317 YcjX-like family, DUF463 VVMO6_01143 PF05128 Domain of unknown function (DUF697) VVMO6_01144 PF18024 Helix-turn-helix domain VVMO6_01144 PF00158 Sigma-54 interaction domain VVMO6_01144 PF13188 PAS domain VVMO6_01145 PF13302 Acetyltransferase (GNAT) domain VVMO6_01148 PF00939 Sodium:sulfate symporter transmembrane region VVMO6_01149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01149 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01149 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_01151 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01151 PF17158 Membrane-associated sensor, integral membrane domain VVMO6_01152 PF00563 EAL domain VVMO6_01152 PF05231 MASE1 VVMO6_01154 PF01966 HD domain VVMO6_01154 PF11871 Domain of unknown function (DUF3391) VVMO6_01155 PF13188 PAS domain VVMO6_01155 PF00563 EAL domain VVMO6_01155 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01155 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01156 PF11230 Protein of unknown function (DUF3029) VVMO6_01157 PF04055 Radical SAM superfamily VVMO6_01158 PF03466 LysR substrate binding domain VVMO6_01158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_01163 PF01966 HD domain VVMO6_01164 PF01734 Patatin-like phospholipase VVMO6_01166 PF00781 Diacylglycerol kinase catalytic domain VVMO6_01167 PF03222 Tryptophan/tyrosine permease family VVMO6_01168 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_01169 PF00072 Response regulator receiver domain VVMO6_01170 PF00210 Ferritin-like domain VVMO6_01173 PF00664 ABC transporter transmembrane region VVMO6_01173 PF00005 ABC transporter VVMO6_01174 PF00005 ABC transporter VVMO6_01174 PF00664 ABC transporter transmembrane region VVMO6_01175 PF01235 Sodium:alanine symporter family VVMO6_01177 PF02397 Bacterial sugar transferase VVMO6_01179 PF02563 Polysaccharide biosynthesis/export protein VVMO6_01179 PF10531 SLBB domain VVMO6_01179 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VVMO6_01184 PF00534 Glycosyl transferases group 1 VVMO6_01184 PF13439 Glycosyltransferase Family 4 VVMO6_01185 PF00534 Glycosyl transferases group 1 VVMO6_01185 PF13439 Glycosyltransferase Family 4 VVMO6_01190 PF00563 EAL domain VVMO6_01190 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01190 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01194 PF00012 Hsp70 protein VVMO6_01195 PF00012 Hsp70 protein VVMO6_01197 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01197 PF17158 Membrane-associated sensor, integral membrane domain VVMO6_01201 PF06629 MltA-interacting protein MipA VVMO6_01207 PF04972 BON domain VVMO6_01207 PF00263 Bacterial type II and III secretion system protein VVMO6_01207 PF13629 Pilus formation protein N terminal region VVMO6_01209 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VVMO6_01210 PF00437 Type II/IV secretion system protein VVMO6_01217 PF02525 Flavodoxin-like fold VVMO6_01219 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VVMO6_01219 PF00271 Helicase conserved C-terminal domain VVMO6_01219 PF04408 Helicase associated domain (HA2) VVMO6_01219 PF00270 DEAD/DEAH box helicase VVMO6_01219 PF11898 Domain of unknown function (DUF3418) VVMO6_01226 PF00561 alpha/beta hydrolase fold VVMO6_01227 PF03280 Proteobacterial lipase chaperone protein VVMO6_01228 PF04397 LytTr DNA-binding domain VVMO6_01228 PF00072 Response regulator receiver domain VVMO6_01229 PF06580 Histidine kinase VVMO6_01229 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01229 PF07694 5TMR of 5TMR-LYT VVMO6_01231 PF07690 Major Facilitator Superfamily VVMO6_01234 PF00672 HAMP domain VVMO6_01234 PF12729 Four helix bundle sensory module for signal transduction VVMO6_01234 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01236 PF00491 Arginase family VVMO6_01237 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VVMO6_01237 PF17944 Arginine decarboxylase C-terminal helical extension VVMO6_01237 PF17810 Arginine decarboxylase helical bundle domain VVMO6_01249 PF00072 Response regulator receiver domain VVMO6_01249 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VVMO6_01250 PF01409 tRNA synthetases class II core domain (F) VVMO6_01251 PF03483 B3/4 domain VVMO6_01251 PF01588 Putative tRNA binding domain VVMO6_01251 PF03484 tRNA synthetase B5 domain VVMO6_01251 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VVMO6_01251 PF03147 Ferredoxin-fold anticodon binding domain VVMO6_01252 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VVMO6_01252 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VVMO6_01255 PF00216 Bacterial DNA-binding protein VVMO6_01257 PF05724 Thiopurine S-methyltransferase (TPMT) VVMO6_01258 PF02222 ATP-grasp domain VVMO6_01259 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VVMO6_01259 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VVMO6_01262 PF00691 OmpA family VVMO6_01262 PF13488 Glycine zipper VVMO6_01265 PF01565 FAD binding domain VVMO6_01265 PF02913 FAD linked oxidases, C-terminal domain VVMO6_01265 PF13183 4Fe-4S dicluster domain VVMO6_01267 PF00089 Trypsin VVMO6_01269 PF00221 Aromatic amino acid lyase VVMO6_01270 PF17391 Urocanase N-terminal domain VVMO6_01270 PF01175 Urocanase Rossmann-like domain VVMO6_01270 PF17392 Urocanase C-terminal domain VVMO6_01271 PF00491 Arginase family VVMO6_01272 PF01979 Amidohydrolase family VVMO6_01273 PF07702 UTRA domain VVMO6_01273 PF00392 Bacterial regulatory proteins, gntR family VVMO6_01274 PF07070 SpoOM protein VVMO6_01276 PF02824 TGS domain VVMO6_01276 PF03129 Anticodon binding domain VVMO6_01276 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VVMO6_01276 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VVMO6_01277 PF00707 Translation initiation factor IF-3, C-terminal domain VVMO6_01277 PF05198 Translation initiation factor IF-3, N-terminal domain VVMO6_01278 PF01632 Ribosomal protein L35 VVMO6_01279 PF00453 Ribosomal protein L20 VVMO6_01280 PF13495 Phage integrase, N-terminal SAM-like domain VVMO6_01280 PF00589 Phage integrase family VVMO6_01299 PF09905 DNA-binding protein VF530 VVMO6_01332 PF13302 Acetyltransferase (GNAT) domain VVMO6_01381 PF13302 Acetyltransferase (GNAT) domain VVMO6_01382 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_01397 PF02567 Phenazine biosynthesis-like protein VVMO6_01407 PF04229 GrpB protein VVMO6_01407 PF13673 Acetyltransferase (GNAT) domain VVMO6_01437 PF13302 Acetyltransferase (GNAT) domain VVMO6_01439 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VVMO6_01440 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VVMO6_01443 PF09905 DNA-binding protein VF530 VVMO6_01465 PF01554 MatE VVMO6_01466 PF00677 Lumazine binding domain VVMO6_01469 PF01339 CheB methylesterase VVMO6_01469 PF00072 Response regulator receiver domain VVMO6_01470 PF05230 MASE2 domain VVMO6_01470 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01472 PF00877 NlpC/P60 family VVMO6_01473 PF17202 Single cache domain 3 VVMO6_01473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01473 PF00672 HAMP domain VVMO6_01476 PF00480 ROK family VVMO6_01478 PF03453 MoeA N-terminal region (domain I and II) VVMO6_01478 PF00994 Probable molybdopterin binding domain VVMO6_01478 PF03454 MoeA C-terminal region (domain IV) VVMO6_01479 PF12804 MobA-like NTP transferase domain VVMO6_01480 PF08402 TOBE domain VVMO6_01480 PF00005 ABC transporter VVMO6_01481 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01482 PF12849 PBP superfamily domain VVMO6_01483 PF02954 Bacterial regulatory protein, Fis family VVMO6_01483 PF00072 Response regulator receiver domain VVMO6_01483 PF00158 Sigma-54 interaction domain VVMO6_01484 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01484 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01484 PF00989 PAS fold VVMO6_01487 PF00005 ABC transporter VVMO6_01487 PF12848 ABC transporter VVMO6_01488 PF00672 HAMP domain VVMO6_01488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01488 PF02743 Cache domain VVMO6_01489 PF02634 FdhD/NarQ family VVMO6_01495 PF01568 Molydopterin dinucleotide binding domain VVMO6_01495 PF00384 Molybdopterin oxidoreductase VVMO6_01495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_01496 PF13247 4Fe-4S dicluster domain VVMO6_01503 PF00909 Ammonium Transporter Family VVMO6_01504 PF02146 Sir2 family VVMO6_01505 PF13416 Bacterial extracellular solute-binding protein VVMO6_01506 PF13416 Bacterial extracellular solute-binding protein VVMO6_01507 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01508 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01509 PF00005 ABC transporter VVMO6_01509 PF08402 TOBE domain VVMO6_01511 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VVMO6_01513 PF01171 PP-loop family VVMO6_01514 PF00582 Universal stress protein family VVMO6_01515 PF13545 Crp-like helix-turn-helix domain VVMO6_01515 PF00027 Cyclic nucleotide-binding domain VVMO6_01518 PF00403 Heavy-metal-associated domain VVMO6_01520 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VVMO6_01520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VVMO6_01523 PF00115 Cytochrome C and Quinol oxidase polypeptide I VVMO6_01526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01526 PF09308 LuxQ, periplasmic VVMO6_01526 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01526 PF00072 Response regulator receiver domain VVMO6_01530 PF06303 MatP N-terminal domain VVMO6_01530 PF17414 MatP C-terminal ribbon-helix-helix domain VVMO6_01531 PF13654 AAA domain VVMO6_01531 PF05362 Lon protease (S16) C-terminal proteolytic domain VVMO6_01532 PF07977 FabA-like domain VVMO6_01533 PF04957 Ribosome modulation factor VVMO6_01537 PF01170 Putative RNA methylase family UPF0020 VVMO6_01537 PF02926 THUMP domain VVMO6_01537 PF10672 S-adenosylmethionine-dependent methyltransferase VVMO6_01538 PF07126 Cell-division protein ZapC VVMO6_01539 PF01180 Dihydroorotate dehydrogenase VVMO6_01541 PF05088 Bacterial NAD-glutamate dehydrogenase VVMO6_01543 PF11940 Domain of unknown function (DUF3458) Ig-like fold VVMO6_01543 PF01433 Peptidase family M1 domain VVMO6_01543 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VVMO6_01548 PF04055 Radical SAM superfamily VVMO6_01548 PF13186 Iron-sulfur cluster-binding domain VVMO6_01563 PF04860 Phage portal protein VVMO6_01581 PF01712 Deoxynucleoside kinase VVMO6_01600 PF13408 Recombinase zinc beta ribbon domain VVMO6_01600 PF00239 Resolvase, N terminal domain VVMO6_01600 PF07508 Recombinase VVMO6_01601 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VVMO6_01601 PF11940 Domain of unknown function (DUF3458) Ig-like fold VVMO6_01601 PF01433 Peptidase family M1 domain VVMO6_01603 PF17804 Tail specific protease N-terminal domain VVMO6_01603 PF11818 C-terminal domain of tail specific protease (DUF3340) VVMO6_01603 PF00595 PDZ domain VVMO6_01603 PF03572 Peptidase family S41 VVMO6_01604 PF04352 ProQ/FINO family VVMO6_01604 PF17516 ProQ C-terminal domain VVMO6_01605 PF13185 GAF domain VVMO6_01606 PF00664 ABC transporter transmembrane region VVMO6_01606 PF00005 ABC transporter VVMO6_01607 PF04403 Paraquat-inducible protein A VVMO6_01608 PF02470 MlaD protein VVMO6_01609 PF01189 16S rRNA methyltransferase RsmB/F VVMO6_01609 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VVMO6_01609 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VVMO6_01610 PF17783 CvfB-like winged helix domain VVMO6_01610 PF13509 S1 domain VVMO6_01613 PF00793 DAHP synthetase I family VVMO6_01614 PF04461 Protein of unknown function (DUF520) VVMO6_01615 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01615 PF17158 Membrane-associated sensor, integral membrane domain VVMO6_01616 PF14743 DNA ligase OB-like domain VVMO6_01616 PF01068 ATP dependent DNA ligase domain VVMO6_01617 PF01740 STAS domain VVMO6_01619 PF10531 SLBB domain VVMO6_01619 PF02563 Polysaccharide biosynthesis/export protein VVMO6_01622 PF17149 Periplasmic sensor domain found in signal transduction proteins VVMO6_01622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01622 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01622 PF00672 HAMP domain VVMO6_01622 PF00072 Response regulator receiver domain VVMO6_01622 PF01627 Hpt domain VVMO6_01623 PF00158 Sigma-54 interaction domain VVMO6_01623 PF00072 Response regulator receiver domain VVMO6_01623 PF02954 Bacterial regulatory protein, Fis family VVMO6_01632 PF00534 Glycosyl transferases group 1 VVMO6_01632 PF13439 Glycosyltransferase Family 4 VVMO6_01634 PF02397 Bacterial sugar transferase VVMO6_01643 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VVMO6_01643 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VVMO6_01644 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VVMO6_01645 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VVMO6_01645 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VVMO6_01646 PF00072 Response regulator receiver domain VVMO6_01646 PF12431 Transcriptional regulator VVMO6_01647 PF17203 Single cache domain 3 VVMO6_01647 PF00989 PAS fold VVMO6_01647 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VVMO6_01647 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01649 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_01655 PF01235 Sodium:alanine symporter family VVMO6_01658 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VVMO6_01659 PF01553 Acyltransferase VVMO6_01660 PF13237 4Fe-4S dicluster domain VVMO6_01660 PF12801 4Fe-4S binding domain VVMO6_01661 PF12838 4Fe-4S dicluster domain VVMO6_01661 PF12800 4Fe-4S binding domain VVMO6_01662 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VVMO6_01662 PF14824 Sirohaem biosynthesis protein central VVMO6_01662 PF10414 Sirohaem synthase dimerisation region VVMO6_01663 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_01664 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01665 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01666 PF00005 ABC transporter VVMO6_01667 PF01027 Inhibitor of apoptosis-promoting Bax1 VVMO6_01669 PF04358 DsrC like protein VVMO6_01670 PF00708 Acylphosphatase VVMO6_01671 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01671 PF00672 HAMP domain VVMO6_01671 PF02743 Cache domain VVMO6_01672 PF10672 S-adenosylmethionine-dependent methyltransferase VVMO6_01672 PF17785 PUA-like domain VVMO6_01677 PF17151 Periplasmic sensor domain VVMO6_01677 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01678 PF06508 Queuosine biosynthesis protein QueC VVMO6_01679 PF04055 Radical SAM superfamily VVMO6_01681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01681 PF02743 Cache domain VVMO6_01681 PF00672 HAMP domain VVMO6_01684 PF00089 Trypsin VVMO6_01686 PF00501 AMP-binding enzyme VVMO6_01686 PF16177 Acetyl-coenzyme A synthetase N-terminus VVMO6_01686 PF13193 AMP-binding enzyme C-terminal domain VVMO6_01687 PF04303 PrpF protein VVMO6_01688 PF00330 Aconitase family (aconitate hydratase) VVMO6_01688 PF00694 Aconitase C-terminal domain VVMO6_01689 PF00285 Citrate synthase, C-terminal domain VVMO6_01696 PF01970 Tripartite tricarboxylate transporter TctA family VVMO6_01701 PF00072 Response regulator receiver domain VVMO6_01701 PF00196 Bacterial regulatory proteins, luxR family VVMO6_01703 PF01925 Sulfite exporter TauE/SafE VVMO6_01704 PF00672 HAMP domain VVMO6_01704 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01704 PF02743 Cache domain VVMO6_01705 PF00072 Response regulator receiver domain VVMO6_01706 PF13416 Bacterial extracellular solute-binding protein VVMO6_01707 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01708 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01709 PF00005 ABC transporter VVMO6_01709 PF17912 MalK OB fold domain VVMO6_01710 PF00455 DeoR C terminal sensor domain VVMO6_01710 PF08220 DeoR-like helix-turn-helix domain VVMO6_01711 PF03009 Glycerophosphoryl diester phosphodiesterase family VVMO6_01712 PF00141 Peroxidase VVMO6_01714 PF00313 'Cold-shock' DNA-binding domain VVMO6_01715 PF00072 Response regulator receiver domain VVMO6_01715 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01720 PF02798 Glutathione S-transferase, N-terminal domain VVMO6_01720 PF14497 Glutathione S-transferase, C-terminal domain VVMO6_01722 PF04209 homogentisate 1,2-dioxygenase VVMO6_01723 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_01724 PF07687 Peptidase dimerisation domain VVMO6_01724 PF01546 Peptidase family M20/M25/M40 VVMO6_01725 PF02872 5'-nucleotidase, C-terminal domain VVMO6_01725 PF00149 Calcineurin-like phosphoesterase VVMO6_01726 PF04204 Homoserine O-succinyltransferase VVMO6_01729 PF05971 RNA methyltransferase VVMO6_01730 PF01863 Protein of unknown function DUF45 VVMO6_01732 PF03466 LysR substrate binding domain VVMO6_01732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_01733 PF07690 Major Facilitator Superfamily VVMO6_01736 PF00005 ABC transporter VVMO6_01737 PF01032 FecCD transport family VVMO6_01738 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VVMO6_01741 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VVMO6_01742 PF02654 Cobalamin-5-phosphate synthase VVMO6_01743 PF02277 Phosphoribosyltransferase VVMO6_01746 PF00929 Exonuclease VVMO6_01746 PF08411 Exonuclease C-terminal VVMO6_01747 PF03788 LrgA family VVMO6_01748 PF04172 LrgB-like family VVMO6_01750 PF01259 SAICAR synthetase VVMO6_01752 PF02253 Phospholipase A1 VVMO6_01753 PF04408 Helicase associated domain (HA2) VVMO6_01753 PF00271 Helicase conserved C-terminal domain VVMO6_01753 PF08482 ATP-dependent helicase C-terminal VVMO6_01753 PF00270 DEAD/DEAH box helicase VVMO6_01754 PF03949 Malic enzyme, NAD binding domain VVMO6_01754 PF00390 Malic enzyme, N-terminal domain VVMO6_01755 PF02698 DUF218 domain VVMO6_01756 PF00939 Sodium:sulfate symporter transmembrane region VVMO6_01757 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01757 PF00072 Response regulator receiver domain VVMO6_01759 PF00266 Aminotransferase class-V VVMO6_01761 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_01762 PF00664 ABC transporter transmembrane region VVMO6_01762 PF00005 ABC transporter VVMO6_01763 PF00664 ABC transporter transmembrane region VVMO6_01763 PF00005 ABC transporter VVMO6_01765 PF00266 Aminotransferase class-V VVMO6_01767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01767 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01767 PF00989 PAS fold VVMO6_01767 PF13188 PAS domain VVMO6_01767 PF13426 PAS domain VVMO6_01767 PF13426 PAS domain VVMO6_01767 PF00989 PAS fold VVMO6_01767 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01767 PF13188 PAS domain VVMO6_01770 PF04993 TfoX N-terminal domain VVMO6_01770 PF04994 TfoX C-terminal domain VVMO6_01772 PF03956 Lysine exporter LysO VVMO6_01774 PF00282 Pyridoxal-dependent decarboxylase conserved domain VVMO6_01775 PF01380 SIS domain VVMO6_01775 PF01418 Helix-turn-helix domain, rpiR family VVMO6_01776 PF00465 Iron-containing alcohol dehydrogenase VVMO6_01777 PF00462 Glutaredoxin VVMO6_01779 PF06826 Predicted Permease Membrane Region VVMO6_01779 PF02080 TrkA-C domain VVMO6_01780 PF07055 Enoyl reductase FAD binding domain VVMO6_01780 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VVMO6_01780 PF12241 Trans-2-enoyl-CoA reductase catalytic region VVMO6_01781 PF02770 Acyl-CoA dehydrogenase, middle domain VVMO6_01781 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VVMO6_01781 PF09317 Domain of unknown function (DUF1974) VVMO6_01781 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VVMO6_01783 PF06965 Na+/H+ antiporter 1 VVMO6_01787 PF00005 ABC transporter VVMO6_01788 PF13460 NAD(P)H-binding VVMO6_01788 PF11066 Protein of unknown function (DUF2867) VVMO6_01789 PF00999 Sodium/hydrogen exchanger family VVMO6_01791 PF07690 Major Facilitator Superfamily VVMO6_01792 PF01479 S4 domain VVMO6_01792 PF00849 RNA pseudouridylate synthase VVMO6_01793 PF04851 Type III restriction enzyme, res subunit VVMO6_01793 PF00271 Helicase conserved C-terminal domain VVMO6_01795 PF00486 Transcriptional regulatory protein, C terminal VVMO6_01795 PF00072 Response regulator receiver domain VVMO6_01796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_01796 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_01796 PF00672 HAMP domain VVMO6_01797 PF01386 Ribosomal L25p family VVMO6_01800 PF03707 Bacterial signalling protein N terminal repeat VVMO6_01800 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01800 PF00563 EAL domain VVMO6_01803 PF06945 Protein of unknown function (DUF1289) VVMO6_01805 PF13416 Bacterial extracellular solute-binding protein VVMO6_01806 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01807 PF00005 ABC transporter VVMO6_01808 PF01066 CDP-alcohol phosphatidyltransferase VVMO6_01809 PF01590 GAF domain VVMO6_01809 PF00158 Sigma-54 interaction domain VVMO6_01810 PF03063 Prismane/CO dehydrogenase family VVMO6_01811 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_01811 PF00970 Oxidoreductase FAD-binding domain VVMO6_01811 PF00175 Oxidoreductase NAD-binding domain VVMO6_01813 PF00849 RNA pseudouridylate synthase VVMO6_01814 PF12729 Four helix bundle sensory module for signal transduction VVMO6_01814 PF00672 HAMP domain VVMO6_01814 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_01815 PF00209 Sodium:neurotransmitter symporter family VVMO6_01816 PF13396 Phospholipase_D-nuclease N-terminal VVMO6_01816 PF13091 PLD-like domain VVMO6_01817 PF01053 Cys/Met metabolism PLP-dependent enzyme VVMO6_01818 PF03352 Methyladenine glycosylase VVMO6_01819 PF00873 AcrB/AcrD/AcrF family VVMO6_01820 PF13533 Biotin-lipoyl like VVMO6_01822 PF04024 PspC domain VVMO6_01823 PF06667 Phage shock protein B VVMO6_01824 PF04012 PspA/IM30 family VVMO6_01825 PF00158 Sigma-54 interaction domain VVMO6_01825 PF02954 Bacterial regulatory protein, Fis family VVMO6_01826 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_01827 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01828 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01828 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_01829 PF00005 ABC transporter VVMO6_01829 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_01830 PF00005 ABC transporter VVMO6_01833 PF02833 DHHA2 domain VVMO6_01833 PF01368 DHH family VVMO6_01835 PF16875 Glycosyl hydrolase family 36 N-terminal domain VVMO6_01835 PF16874 Glycosyl hydrolase family 36 C-terminal domain VVMO6_01839 PF00384 Molybdopterin oxidoreductase VVMO6_01839 PF18364 Molybdopterin oxidoreductase N-terminal domain VVMO6_01839 PF01568 Molydopterin dinucleotide binding domain VVMO6_01840 PF03264 NapC/NirT cytochrome c family, N-terminal region VVMO6_01841 PF06796 Periplasmic nitrate reductase protein NapE VVMO6_01842 PF03649 Uncharacterised protein family (UPF0014) VVMO6_01844 PF01226 Formate/nitrite transporter VVMO6_01848 PF03466 LysR substrate binding domain VVMO6_01848 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_01849 PF01370 NAD dependent epimerase/dehydratase family VVMO6_01851 PF00265 Thymidine kinase VVMO6_01852 PF01406 tRNA synthetases class I (C) catalytic domain VVMO6_01852 PF09190 DALR domain VVMO6_01853 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VVMO6_01854 PF00149 Calcineurin-like phosphoesterase VVMO6_01855 PF08668 HDOD domain VVMO6_01855 PF00563 EAL domain VVMO6_01856 PF02810 SEC-C motif VVMO6_01857 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VVMO6_01857 PF01502 Phosphoribosyl-AMP cyclohydrolase VVMO6_01858 PF00977 Histidine biosynthesis protein VVMO6_01859 PF00977 Histidine biosynthesis protein VVMO6_01860 PF00117 Glutamine amidotransferase class-I VVMO6_01861 PF00475 Imidazoleglycerol-phosphate dehydratase VVMO6_01861 PF08645 Polynucleotide kinase 3 phosphatase VVMO6_01862 PF00155 Aminotransferase class I and II VVMO6_01863 PF00815 Histidinol dehydrogenase VVMO6_01864 PF01634 ATP phosphoribosyltransferase VVMO6_01864 PF08029 HisG, C-terminal domain VVMO6_01865 PF03553 Na+/H+ antiporter family VVMO6_01867 PF00816 H-NS histone family VVMO6_01868 PF00294 pfkB family carbohydrate kinase VVMO6_01871 PF04356 Protein of unknown function (DUF489) VVMO6_01872 PF08328 Adenylosuccinate lyase C-terminal VVMO6_01872 PF00206 Lyase VVMO6_01879 PF00106 short chain dehydrogenase VVMO6_01881 PF01435 Peptidase family M48 VVMO6_01884 PF08241 Methyltransferase domain VVMO6_01885 PF00155 Aminotransferase class I and II VVMO6_01886 PF04055 Radical SAM superfamily VVMO6_01886 PF06968 Biotin and Thiamin Synthesis associated domain VVMO6_01887 PF00202 Aminotransferase class-III VVMO6_01888 PF02403 Seryl-tRNA synthetase N-terminal domain VVMO6_01888 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VVMO6_01889 PF16193 AAA C-terminal domain VVMO6_01889 PF12002 MgsA AAA+ ATPase C terminal VVMO6_01889 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_01890 PF03548 Outer membrane lipoprotein carrier protein LolA VVMO6_01891 PF01580 FtsK/SpoIIIE family VVMO6_01891 PF09397 Ftsk gamma domain VVMO6_01891 PF17854 FtsK alpha domain VVMO6_01891 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VVMO6_01892 PF01037 Lrp/AsnC ligand binding domain VVMO6_01893 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VVMO6_01893 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VVMO6_01895 PF03466 LysR substrate binding domain VVMO6_01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_01897 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VVMO6_01898 PF01609 Transposase DDE domain VVMO6_01898 PF13006 Insertion element 4 transposase N-terminal VVMO6_01901 PF00753 Metallo-beta-lactamase superfamily VVMO6_01902 PF05951 Bacterial protein of unknown function (DUF882) VVMO6_01903 PF01471 Putative peptidoglycan binding domain VVMO6_01903 PF03734 L,D-transpeptidase catalytic domain VVMO6_01908 PF01609 Transposase DDE domain VVMO6_01908 PF13006 Insertion element 4 transposase N-terminal VVMO6_01911 PF00005 ABC transporter VVMO6_01911 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_01912 PF00005 ABC transporter VVMO6_01912 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_01913 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_01914 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01914 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_01915 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_01916 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VVMO6_01917 PF18073 Rubredoxin metal binding domain VVMO6_01918 PF06305 Lipopolysaccharide assembly protein A domain VVMO6_01919 PF00216 Bacterial DNA-binding protein VVMO6_01920 PF00575 S1 RNA binding domain VVMO6_01921 PF02224 Cytidylate kinase VVMO6_01922 PF01343 Peptidase family S49 VVMO6_01922 PF08496 Peptidase family S49 N-terminal VVMO6_01923 PF00106 short chain dehydrogenase VVMO6_01926 PF14579 Helix-hairpin-helix motif VVMO6_01926 PF02811 PHP domain VVMO6_01926 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VVMO6_01926 PF01336 OB-fold nucleic acid binding domain VVMO6_01926 PF07733 Bacterial DNA polymerase III alpha NTPase domain VVMO6_01927 PF01584 CheW-like domain VVMO6_01927 PF00072 Response regulator receiver domain VVMO6_01928 PF00480 ROK family VVMO6_01929 PF02887 Pyruvate kinase, alpha/beta domain VVMO6_01929 PF00224 Pyruvate kinase, barrel domain VVMO6_01930 PF01734 Patatin-like phospholipase VVMO6_01932 PF00209 Sodium:neurotransmitter symporter family VVMO6_01934 PF02378 Phosphotransferase system, EIIC VVMO6_01934 PF00367 phosphotransferase system, EIIB VVMO6_01935 PF01026 TatD related DNase VVMO6_01936 PF09115 DNA polymerase III, delta subunit, C terminal VVMO6_01937 PF02223 Thymidylate kinase VVMO6_01938 PF02618 YceG-like family VVMO6_01939 PF01063 Amino-transferase class IV VVMO6_01940 PF00109 Beta-ketoacyl synthase, N-terminal domain VVMO6_01940 PF02801 Beta-ketoacyl synthase, C-terminal domain VVMO6_01941 PF00550 Phosphopantetheine attachment site VVMO6_01943 PF00698 Acyl transferase domain VVMO6_01944 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VVMO6_01944 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VVMO6_01945 PF02504 Fatty acid synthesis protein VVMO6_01946 PF01783 Ribosomal L32p protein family VVMO6_01947 PF02620 Large ribosomal RNA subunit accumulation protein YceD VVMO6_01948 PF02545 Maf-like protein VVMO6_01949 PF00849 RNA pseudouridylate synthase VVMO6_01949 PF01479 S4 domain VVMO6_01951 PF12111 Polyribonucleotide phosphorylase C terminal VVMO6_01951 PF10150 Ribonuclease E/G family VVMO6_01951 PF00575 S1 RNA binding domain VVMO6_01952 PF01740 STAS domain VVMO6_01952 PF00916 Sulfate permease family VVMO6_01953 PF01451 Low molecular weight phosphotyrosine protein phosphatase VVMO6_01954 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VVMO6_01954 PF12557 Cob(I)alamin adenosyltransferase N terminal VVMO6_01956 PF00485 Phosphoribulokinase / Uridine kinase family VVMO6_01957 PF10609 NUBPL iron-transfer P-loop NTPase VVMO6_01958 PF09334 tRNA synthetases class I (M) VVMO6_01958 PF01588 Putative tRNA binding domain VVMO6_01961 PF03918 Cytochrome C biogenesis protein VVMO6_01962 PF08534 Redoxin VVMO6_01963 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VVMO6_01963 PF01578 Cytochrome C assembly protein VVMO6_01964 PF03916 Polysulphide reductase, NrfD VVMO6_01965 PF13247 4Fe-4S dicluster domain VVMO6_01967 PF02335 Cytochrome c552 VVMO6_01971 PF03989 DNA gyrase C-terminal domain, beta-propeller VVMO6_01971 PF00521 DNA gyrase/topoisomerase IV, subunit A VVMO6_01974 PF03477 ATP cone domain VVMO6_01974 PF00317 Ribonucleotide reductase, all-alpha domain VVMO6_01974 PF02867 Ribonucleotide reductase, barrel domain VVMO6_01975 PF00268 Ribonucleotide reductase, small chain VVMO6_01977 PF02464 Competence-damaged protein VVMO6_01977 PF00994 Probable molybdopterin binding domain VVMO6_01981 PF03435 Saccharopine dehydrogenase NADP binding domain VVMO6_01981 PF16653 Saccharopine dehydrogenase C-terminal domain VVMO6_01982 PF00202 Aminotransferase class-III VVMO6_01983 PF01066 CDP-alcohol phosphatidyltransferase VVMO6_01984 PF08459 UvrC Helix-hairpin-helix N-terminal VVMO6_01984 PF02151 UvrB/uvrC motif VVMO6_01984 PF01541 GIY-YIG catalytic domain VVMO6_01985 PF00072 Response regulator receiver domain VVMO6_01985 PF00196 Bacterial regulatory proteins, luxR family VVMO6_01986 PF00136 DNA polymerase family B VVMO6_01986 PF03104 DNA polymerase family B, exonuclease domain VVMO6_01987 PF08447 PAS fold VVMO6_01987 PF00563 EAL domain VVMO6_01987 PF08448 PAS fold VVMO6_01987 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_01989 PF09285 Elongation factor P, C-terminal VVMO6_01989 PF08207 Elongation factor P (EF-P) KOW-like domain VVMO6_01989 PF01132 Elongation factor P (EF-P) OB domain VVMO6_01990 PF04269 Protein of unknown function, DUF440 VVMO6_01991 PF00849 RNA pseudouridylate synthase VVMO6_01991 PF01479 S4 domain VVMO6_01993 PF01300 Telomere recombination VVMO6_01994 PF02811 PHP domain VVMO6_01995 PF08056 Tryptophan operon leader peptide VVMO6_01996 PF00425 chorismate binding enzyme VVMO6_01996 PF04715 Anthranilate synthase component I, N terminal region VVMO6_01997 PF00117 Glutamine amidotransferase class-I VVMO6_01998 PF02885 Glycosyl transferase family, helical bundle domain VVMO6_01998 PF00591 Glycosyl transferase family, a/b domain VVMO6_01999 PF00218 Indole-3-glycerol phosphate synthase VVMO6_01999 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VVMO6_02000 PF00291 Pyridoxal-phosphate dependent enzyme VVMO6_02001 PF00290 Tryptophan synthase alpha chain VVMO6_02002 PF00375 Sodium:dicarboxylate symporter family VVMO6_02004 PF04279 Intracellular septation protein A VVMO6_02005 PF03061 Thioesterase superfamily VVMO6_02006 PF03795 YCII-related domain VVMO6_02008 PF13409 Glutathione S-transferase, N-terminal domain VVMO6_02010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02010 PF00005 ABC transporter VVMO6_02011 PF00005 ABC transporter VVMO6_02011 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02012 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02012 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_02013 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02014 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_02016 PF02391 MoaE protein VVMO6_02017 PF02597 ThiS family VVMO6_02018 PF01967 MoaC family VVMO6_02019 PF00994 Probable molybdopterin binding domain VVMO6_02020 PF06463 Molybdenum Cofactor Synthesis C VVMO6_02020 PF04055 Radical SAM superfamily VVMO6_02021 PF01933 Uncharacterised protein family UPF0052 VVMO6_02022 PF01627 Hpt domain VVMO6_02023 PF02954 Bacterial regulatory protein, Fis family VVMO6_02023 PF00072 Response regulator receiver domain VVMO6_02023 PF00158 Sigma-54 interaction domain VVMO6_02024 PF00271 Helicase conserved C-terminal domain VVMO6_02024 PF17757 UvrB interaction domain VVMO6_02024 PF04851 Type III restriction enzyme, res subunit VVMO6_02024 PF02151 UvrB/uvrC motif VVMO6_02024 PF12344 Ultra-violet resistance protein B VVMO6_02026 PF02508 Rnf-Nqr subunit, membrane protein VVMO6_02027 PF04060 Putative Fe-S cluster VVMO6_02028 PF12838 4Fe-4S dicluster domain VVMO6_02028 PF13375 RnfC Barrel sandwich hybrid domain VVMO6_02028 PF10531 SLBB domain VVMO6_02028 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VVMO6_02029 PF03116 NQR2, RnfD, RnfE family VVMO6_02030 PF04205 FMN-binding domain VVMO6_02031 PF02508 Rnf-Nqr subunit, membrane protein VVMO6_02032 PF00730 HhH-GPD superfamily base excision DNA repair protein VVMO6_02032 PF00633 Helix-hairpin-helix motif VVMO6_02032 PF10576 Iron-sulfur binding domain of endonuclease III VVMO6_02033 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_02034 PF10952 Protein of unknown function (DUF2753) VVMO6_02035 PF18393 MotY N-terminal domain VVMO6_02035 PF00691 OmpA family VVMO6_02036 PF00929 Exonuclease VVMO6_02037 PF13726 Na+-H+ antiporter family VVMO6_02037 PF03553 Na+/H+ antiporter family VVMO6_02039 PF00462 Glutaredoxin VVMO6_02040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VVMO6_02040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VVMO6_02043 PF00171 Aldehyde dehydrogenase family VVMO6_02043 PF00465 Iron-containing alcohol dehydrogenase VVMO6_02044 PF01914 MarC family integral membrane protein VVMO6_02045 PF00027 Cyclic nucleotide-binding domain VVMO6_02045 PF00520 Ion transport protein VVMO6_02047 PF02774 Semialdehyde dehydrogenase, dimerisation domain VVMO6_02047 PF01118 Semialdehyde dehydrogenase, NAD binding domain VVMO6_02048 PF03553 Na+/H+ antiporter family VVMO6_02051 PF04245 37-kD nucleoid-associated bacterial protein VVMO6_02052 PF07208 Protein of unknown function (DUF1414) VVMO6_02053 PF11893 Domain of unknown function (DUF3413) VVMO6_02053 PF00884 Sulfatase VVMO6_02062 PF18284 DNA methylase N-terminal domain VVMO6_02062 PF00145 C-5 cytosine-specific DNA methylase VVMO6_02063 PF01844 HNH endonuclease VVMO6_02066 PF02254 TrkA-N domain VVMO6_02066 PF02080 TrkA-C domain VVMO6_02067 PF02386 Cation transport protein VVMO6_02068 PF04074 YhcH/YjgK/YiaL VVMO6_02069 PF13091 PLD-like domain VVMO6_02070 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02070 PF00072 Response regulator receiver domain VVMO6_02071 PF09308 LuxQ, periplasmic VVMO6_02071 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02071 PF00072 Response regulator receiver domain VVMO6_02072 PF00850 Histone deacetylase domain VVMO6_02073 PF01131 DNA topoisomerase VVMO6_02073 PF01751 Toprim domain VVMO6_02074 PF00881 Nitroreductase family VVMO6_02075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VVMO6_02075 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_02076 PF01343 Peptidase family S49 VVMO6_02077 PF00710 Asparaginase, N-terminal VVMO6_02077 PF17763 Glutaminase/Asparaginase C-terminal domain VVMO6_02078 PF07023 Protein of unknown function (DUF1315) VVMO6_02080 PF01641 SelR domain VVMO6_02081 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_02081 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VVMO6_02082 PF01263 Aldose 1-epimerase VVMO6_02083 PF00672 HAMP domain VVMO6_02083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_02083 PF02743 Cache domain VVMO6_02087 PF07969 Amidohydrolase family VVMO6_02088 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02088 PF00563 EAL domain VVMO6_02088 PF13426 PAS domain VVMO6_02091 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VVMO6_02092 PF09619 Type III secretion system lipoprotein chaperone (YscW) VVMO6_02095 PF01037 Lrp/AsnC ligand binding domain VVMO6_02095 PF13404 AsnC-type helix-turn-helix domain VVMO6_02096 PF00291 Pyridoxal-phosphate dependent enzyme VVMO6_02099 PF00873 AcrB/AcrD/AcrF family VVMO6_02100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_02100 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_02104 PF07690 Major Facilitator Superfamily VVMO6_02105 PF03601 Conserved hypothetical protein 698 VVMO6_02107 PF00501 AMP-binding enzyme VVMO6_02107 PF13193 AMP-binding enzyme C-terminal domain VVMO6_02108 PF13378 Enolase C-terminal domain-like VVMO6_02109 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_02110 PF12697 Alpha/beta hydrolase family VVMO6_02111 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VVMO6_02111 PF16582 Middle domain of thiamine pyrophosphate VVMO6_02111 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VVMO6_02112 PF00425 chorismate binding enzyme VVMO6_02113 PF00155 Aminotransferase class I and II VVMO6_02115 PF13286 Phosphohydrolase-associated domain VVMO6_02115 PF01966 HD domain VVMO6_02119 PF13145 PPIC-type PPIASE domain VVMO6_02120 PF00216 Bacterial DNA-binding protein VVMO6_02121 PF02190 ATP-dependent protease La (LON) substrate-binding domain VVMO6_02121 PF05362 Lon protease (S16) C-terminal proteolytic domain VVMO6_02121 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_02122 PF10431 C-terminal, D2-small domain, of ClpB protein VVMO6_02122 PF06689 ClpX C4-type zinc finger VVMO6_02122 PF07724 AAA domain (Cdc48 subfamily) VVMO6_02123 PF00574 Clp protease VVMO6_02124 PF05697 Bacterial trigger factor protein (TF) VVMO6_02124 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_02124 PF05698 Bacterial trigger factor protein (TF) C-terminus VVMO6_02126 PF02743 Cache domain VVMO6_02126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02126 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02127 PF02954 Bacterial regulatory protein, Fis family VVMO6_02127 PF00158 Sigma-54 interaction domain VVMO6_02127 PF00072 Response regulator receiver domain VVMO6_02129 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VVMO6_02130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VVMO6_02131 PF03480 Bacterial extracellular solute-binding protein, family 7 VVMO6_02132 PF03459 TOBE domain VVMO6_02132 PF00005 ABC transporter VVMO6_02132 PF17912 MalK OB fold domain VVMO6_02133 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02135 PF01547 Bacterial extracellular solute-binding protein VVMO6_02136 PF00672 HAMP domain VVMO6_02136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02136 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02137 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02137 PF00072 Response regulator receiver domain VVMO6_02138 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VVMO6_02139 PF02743 Cache domain VVMO6_02139 PF00672 HAMP domain VVMO6_02139 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_02142 PF04820 Tryptophan halogenase VVMO6_02147 PF00550 Phosphopantetheine attachment site VVMO6_02148 PF00550 Phosphopantetheine attachment site VVMO6_02150 PF13193 AMP-binding enzyme C-terminal domain VVMO6_02150 PF00501 AMP-binding enzyme VVMO6_02152 PF00535 Glycosyl transferase family 2 VVMO6_02153 PF00221 Aromatic amino acid lyase VVMO6_02158 PF00109 Beta-ketoacyl synthase, N-terminal domain VVMO6_02158 PF02801 Beta-ketoacyl synthase, C-terminal domain VVMO6_02161 PF02801 Beta-ketoacyl synthase, C-terminal domain VVMO6_02161 PF00109 Beta-ketoacyl synthase, N-terminal domain VVMO6_02162 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02162 PF18719 ArlS sensor domain VVMO6_02162 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02163 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02163 PF00072 Response regulator receiver domain VVMO6_02165 PF07670 Nucleoside recognition VVMO6_02165 PF07662 Na+ dependent nucleoside transporter C-terminus VVMO6_02165 PF01773 Na+ dependent nucleoside transporter N-terminus VVMO6_02166 PF03466 LysR substrate binding domain VVMO6_02166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02167 PF13406 Transglycosylase SLT domain VVMO6_02168 PF05166 YcgL domain VVMO6_02169 PF05209 Septum formation inhibitor MinC, N-terminal domain VVMO6_02169 PF03775 Septum formation inhibitor MinC, C-terminal domain VVMO6_02170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VVMO6_02171 PF03776 Septum formation topological specificity factor MinE VVMO6_02172 PF01612 3'-5' exonuclease VVMO6_02172 PF00570 HRDC domain VVMO6_02173 PF00501 AMP-binding enzyme VVMO6_02173 PF13193 AMP-binding enzyme C-terminal domain VVMO6_02174 PF00561 alpha/beta hydrolase fold VVMO6_02177 PF00814 Glycoprotease family VVMO6_02178 PF13307 Helicase C-terminal domain VVMO6_02178 PF04851 Type III restriction enzyme, res subunit VVMO6_02180 PF00551 Formyl transferase VVMO6_02180 PF01842 ACT domain VVMO6_02181 PF06185 YecM protein VVMO6_02182 PF03485 Arginyl tRNA synthetase N terminal domain VVMO6_02182 PF05746 DALR anticodon binding domain VVMO6_02182 PF00750 tRNA synthetases class I (R) VVMO6_02185 PF07670 Nucleoside recognition VVMO6_02185 PF02421 Ferrous iron transport protein B VVMO6_02185 PF07664 Ferrous iron transport protein B C terminus VVMO6_02186 PF04023 FeoA domain VVMO6_02189 PF01297 Zinc-uptake complex component A periplasmic VVMO6_02190 PF00005 ABC transporter VVMO6_02191 PF00950 ABC 3 transport family VVMO6_02192 PF00549 CoA-ligase VVMO6_02192 PF02629 CoA binding domain VVMO6_02193 PF08442 ATP-grasp domain VVMO6_02193 PF00549 CoA-ligase VVMO6_02194 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VVMO6_02194 PF02817 e3 binding domain VVMO6_02194 PF00364 Biotin-requiring enzyme VVMO6_02195 PF02779 Transketolase, pyrimidine binding domain VVMO6_02195 PF16870 2-oxoglutarate dehydrogenase C-terminal VVMO6_02195 PF00676 Dehydrogenase E1 component VVMO6_02195 PF16078 2-oxoglutarate dehydrogenase N-terminus VVMO6_02196 PF13085 2Fe-2S iron-sulfur cluster binding domain VVMO6_02197 PF02910 Fumarate reductase flavoprotein C-term VVMO6_02197 PF00890 FAD binding domain VVMO6_02198 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VVMO6_02199 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VVMO6_02200 PF00285 Citrate synthase, C-terminal domain VVMO6_02201 PF01784 NIF3 (NGG1p interacting factor 3) VVMO6_02203 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VVMO6_02203 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_02204 PF00375 Sodium:dicarboxylate symporter family VVMO6_02205 PF01042 Endoribonuclease L-PSP VVMO6_02206 PF13309 HTH domain VVMO6_02206 PF08348 YheO-like PAS domain VVMO6_02207 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VVMO6_02207 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VVMO6_02207 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VVMO6_02207 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VVMO6_02208 PF17206 SeqA protein N-terminal domain VVMO6_02208 PF03925 SeqA protein C-terminal domain VVMO6_02209 PF12697 Alpha/beta hydrolase family VVMO6_02211 PF00258 Flavodoxin VVMO6_02213 PF01475 Ferric uptake regulator family VVMO6_02214 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VVMO6_02214 PF00749 tRNA synthetases class I (E and Q), catalytic domain VVMO6_02215 PF02378 Phosphotransferase system, EIIC VVMO6_02215 PF00367 phosphotransferase system, EIIB VVMO6_02216 PF01979 Amidohydrolase family VVMO6_02217 PF01047 MarR family VVMO6_02217 PF00480 ROK family VVMO6_02218 PF00999 Sodium/hydrogen exchanger family VVMO6_02218 PF02254 TrkA-N domain VVMO6_02219 PF13537 Glutamine amidotransferase domain VVMO6_02219 PF00733 Asparagine synthase VVMO6_02221 PF00854 POT family VVMO6_02222 PF17200 Single Cache domain 2 VVMO6_02222 PF00672 HAMP domain VVMO6_02222 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_02223 PF00762 Ferrochelatase VVMO6_02224 PF05191 Adenylate kinase, active site lid VVMO6_02226 PF00183 Hsp90 protein VVMO6_02226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02227 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02228 PF17323 Trans-membrane regulatory protein ToxS VVMO6_02231 PF12850 Calcineurin-like phosphoesterase superfamily domain VVMO6_02234 PF07556 Protein of unknown function (DUF1538) VVMO6_02235 PF07556 Protein of unknown function (DUF1538) VVMO6_02236 PF01370 NAD dependent epimerase/dehydratase family VVMO6_02236 PF08338 Domain of unknown function (DUF1731) VVMO6_02237 PF00106 short chain dehydrogenase VVMO6_02238 PF00085 Thioredoxin VVMO6_02240 PF01145 SPFH domain / Band 7 family VVMO6_02240 PF16200 C-terminal region of band_7 VVMO6_02244 PF03120 NAD-dependent DNA ligase OB-fold domain VVMO6_02244 PF00533 BRCA1 C Terminus (BRCT) domain VVMO6_02244 PF01653 NAD-dependent DNA ligase adenylation domain VVMO6_02244 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VVMO6_02244 PF12826 Helix-hairpin-helix motif VVMO6_02245 PF04354 ZipA, C-terminal FtsZ-binding domain VVMO6_02247 PF00291 Pyridoxal-phosphate dependent enzyme VVMO6_02248 PF00381 PTS HPr component phosphorylation site VVMO6_02249 PF05524 PEP-utilising enzyme, N-terminal VVMO6_02249 PF02896 PEP-utilising enzyme, TIM barrel domain VVMO6_02249 PF00391 PEP-utilising enzyme, mobile domain VVMO6_02250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VVMO6_02251 PF07196 Flagellin hook IN motif VVMO6_02251 PF00669 Bacterial flagellin N-terminal helical region VVMO6_02251 PF00700 Bacterial flagellin C-terminal helical region VVMO6_02252 PF00669 Bacterial flagellin N-terminal helical region VVMO6_02252 PF00700 Bacterial flagellin C-terminal helical region VVMO6_02252 PF07196 Flagellin hook IN motif VVMO6_02255 PF00700 Bacterial flagellin C-terminal helical region VVMO6_02255 PF00669 Bacterial flagellin N-terminal helical region VVMO6_02255 PF07196 Flagellin hook IN motif VVMO6_02256 PF00669 Bacterial flagellin N-terminal helical region VVMO6_02257 PF07196 Flagellin hook IN motif VVMO6_02257 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VVMO6_02258 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VVMO6_02258 PF10135 Rod binding protein VVMO6_02259 PF02119 Flagellar P-ring protein VVMO6_02260 PF02107 Flagellar L-ring protein VVMO6_02261 PF00460 Flagella basal body rod protein VVMO6_02261 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VVMO6_02262 PF00460 Flagella basal body rod protein VVMO6_02262 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VVMO6_02263 PF07559 Flagellar basal body protein FlaE VVMO6_02263 PF00460 Flagella basal body rod protein VVMO6_02263 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VVMO6_02264 PF13861 FlgD Tudor-like domain VVMO6_02264 PF13860 FlgD Ig-like domain VVMO6_02264 PF03963 Flagellar hook capping protein - N-terminal region VVMO6_02265 PF00460 Flagella basal body rod protein VVMO6_02265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VVMO6_02266 PF00460 Flagella basal body rod protein VVMO6_02267 PF03705 CheR methyltransferase, all-alpha domain VVMO6_02267 PF01739 CheR methyltransferase, SAM binding domain VVMO6_02268 PF01584 CheW-like domain VVMO6_02268 PF00072 Response regulator receiver domain VVMO6_02276 PF00749 tRNA synthetases class I (E and Q), catalytic domain VVMO6_02277 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VVMO6_02279 PF13609 Gram-negative porin VVMO6_02280 PF00403 Heavy-metal-associated domain VVMO6_02282 PF03173 Putative carbohydrate binding domain VVMO6_02282 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VVMO6_02282 PF00728 Glycosyl hydrolase family 20, catalytic domain VVMO6_02282 PF02838 Glycosyl hydrolase family 20, domain 2 VVMO6_02283 PF01963 TraB family VVMO6_02285 PF01713 Smr domain VVMO6_02286 PF01479 S4 domain VVMO6_02286 PF00849 RNA pseudouridylate synthase VVMO6_02287 PF04073 Aminoacyl-tRNA editing domain VVMO6_02288 PF02872 5'-nucleotidase, C-terminal domain VVMO6_02288 PF00149 Calcineurin-like phosphoesterase VVMO6_02289 PF00793 DAHP synthetase I family VVMO6_02290 PF13369 Transglutaminase-like superfamily VVMO6_02291 PF04247 Invasion gene expression up-regulator, SirB VVMO6_02292 PF13847 Methyltransferase domain VVMO6_02292 PF17827 PrmC N-terminal domain VVMO6_02293 PF00472 RF-1 domain VVMO6_02293 PF03462 PCRF domain VVMO6_02294 PF01488 Shikimate / quinate 5-dehydrogenase VVMO6_02294 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VVMO6_02294 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VVMO6_02295 PF03550 Outer membrane lipoprotein LolB VVMO6_02296 PF00288 GHMP kinases N terminal domain VVMO6_02296 PF08544 GHMP kinases C terminal VVMO6_02297 PF14572 Phosphoribosyl synthetase-associated domain VVMO6_02297 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VVMO6_02298 PF01195 Peptidyl-tRNA hydrolase VVMO6_02299 PF01926 50S ribosome-binding GTPase VVMO6_02299 PF06071 Protein of unknown function (DUF933) VVMO6_02300 PF01494 FAD binding domain VVMO6_02301 PF00919 Uncharacterized protein family UPF0004 VVMO6_02301 PF04055 Radical SAM superfamily VVMO6_02301 PF01938 TRAM domain VVMO6_02302 PF02562 PhoH-like protein VVMO6_02303 PF02130 Uncharacterized protein family UPF0054 VVMO6_02304 PF00571 CBS domain VVMO6_02304 PF03471 Transporter associated domain VVMO6_02305 PF00795 Carbon-nitrogen hydrolase VVMO6_02306 PF07295 Zinc-ribbon containing domain VVMO6_02307 PF00133 tRNA synthetases class I (I, L, M and V) VVMO6_02307 PF13603 Leucyl-tRNA synthetase, Domain 2 VVMO6_02307 PF08264 Anticodon-binding domain of tRNA VVMO6_02308 PF04390 Lipopolysaccharide-assembly VVMO6_02309 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VVMO6_02309 PF06144 DNA polymerase III, delta subunit VVMO6_02311 PF02590 Predicted SPOUT methyltransferase VVMO6_02312 PF00905 Penicillin binding protein transpeptidase domain VVMO6_02312 PF03717 Penicillin-binding Protein dimerisation domain VVMO6_02313 PF01098 Cell cycle protein VVMO6_02314 PF05036 Sporulation related domain VVMO6_02314 PF03330 Lytic transglycolase VVMO6_02315 PF00768 D-alanyl-D-alanine carboxypeptidase VVMO6_02315 PF07943 Penicillin-binding protein 5, C-terminal domain VVMO6_02316 PF04359 Protein of unknown function (DUF493) VVMO6_02317 PF03099 Biotin/lipoate A/B protein ligase family VVMO6_02318 PF04055 Radical SAM superfamily VVMO6_02318 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VVMO6_02320 PF00464 Serine hydroxymethyltransferase VVMO6_02326 PF00128 Alpha amylase, catalytic domain VVMO6_02326 PF16657 Maltogenic Amylase, C-terminal domain VVMO6_02327 PF00367 phosphotransferase system, EIIB VVMO6_02327 PF02378 Phosphotransferase system, EIIC VVMO6_02328 PF00356 Bacterial regulatory proteins, lacI family VVMO6_02330 PF00005 ABC transporter VVMO6_02330 PF09383 NIL domain VVMO6_02331 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02332 PF03180 NLPA lipoprotein VVMO6_02333 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VVMO6_02334 PF07348 Syd protein (SUKH-2) VVMO6_02335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VVMO6_02335 PF14489 QueF-like protein VVMO6_02337 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02338 PF11892 Domain of unknown function (DUF3412) VVMO6_02338 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VVMO6_02338 PF03641 Possible lysine decarboxylase VVMO6_02339 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VVMO6_02339 PF01367 5'-3' exonuclease, C-terminal SAM fold VVMO6_02340 PF01223 DNA/RNA non-specific endonuclease VVMO6_02341 PF18125 RlmM ferredoxin-like domain VVMO6_02341 PF01728 FtsJ-like methyltransferase VVMO6_02342 PF04241 Protein of unknown function (DUF423) VVMO6_02344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02344 PF03466 LysR substrate binding domain VVMO6_02348 PF02926 THUMP domain VVMO6_02348 PF02568 Thiamine biosynthesis protein (ThiI) VVMO6_02350 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_02351 PF02609 Exonuclease VII small subunit VVMO6_02352 PF00348 Polyprenyl synthetase VVMO6_02353 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VVMO6_02353 PF02779 Transketolase, pyrimidine binding domain VVMO6_02353 PF02780 Transketolase, C-terminal domain VVMO6_02354 PF04608 Phosphatidylglycerophosphatase A VVMO6_02355 PF02769 AIR synthase related protein, C-terminal domain VVMO6_02355 PF00586 AIR synthase related protein, N-terminal domain VVMO6_02356 PF01029 NusB family VVMO6_02357 PF00885 6,7-dimethyl-8-ribityllumazine synthase VVMO6_02358 PF00925 GTP cyclohydrolase II VVMO6_02358 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VVMO6_02359 PF00677 Lumazine binding domain VVMO6_02360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VVMO6_02360 PF01872 RibD C-terminal domain VVMO6_02361 PF03477 ATP cone domain VVMO6_02362 PF00171 Aldehyde dehydrogenase family VVMO6_02363 PF00696 Amino acid kinase family VVMO6_02363 PF01472 PUA domain VVMO6_02364 PF07417 Sigma factor-binding transcriptional regulator Crl VVMO6_02366 PF00156 Phosphoribosyl transferase domain VVMO6_02367 PF00860 Permease family VVMO6_02368 PF01546 Peptidase family M20/M25/M40 VVMO6_02368 PF07687 Peptidase dimerisation domain VVMO6_02374 PF02769 AIR synthase related protein, C-terminal domain VVMO6_02374 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VVMO6_02374 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VVMO6_02375 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_02375 PF01464 Transglycosylase SLT domain VVMO6_02376 PF14437 MafB19-like deaminase VVMO6_02377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02377 PF03466 LysR substrate binding domain VVMO6_02378 PF00107 Zinc-binding dehydrogenase VVMO6_02378 PF08240 Alcohol dehydrogenase GroES-like domain VVMO6_02379 PF00756 Putative esterase VVMO6_02380 PF03806 AbgT putative transporter family VVMO6_02383 PF07963 Prokaryotic N-terminal methylation motif VVMO6_02383 PF00114 Pilin (bacterial filament) VVMO6_02384 PF01556 DnaJ C terminal domain VVMO6_02384 PF00226 DnaJ domain VVMO6_02384 PF00684 DnaJ central domain VVMO6_02385 PF00012 Hsp70 protein VVMO6_02391 PF00375 Sodium:dicarboxylate symporter family VVMO6_02392 PF01025 GrpE VVMO6_02393 PF01513 ATP-NAD kinase VVMO6_02394 PF02463 RecF/RecN/SMC N terminal domain VVMO6_02395 PF04355 SmpA / OmlA family VVMO6_02396 PF03658 RnfH family Ubiquitin VVMO6_02397 PF03364 Polyketide cyclase / dehydrase and lipid transport VVMO6_02398 PF01668 SmpB protein VVMO6_02407 PF01300 Telomere recombination VVMO6_02407 PF03481 Putative GTP-binding controlling metal-binding VVMO6_02411 PF02028 BCCT, betaine/carnitine/choline family transporter VVMO6_02412 PF07885 Ion channel VVMO6_02413 PF03466 LysR substrate binding domain VVMO6_02413 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02414 PF01266 FAD dependent oxidoreductase VVMO6_02415 PF01235 Sodium:alanine symporter family VVMO6_02416 PF01184 GPR1/FUN34/yaaH family VVMO6_02417 PF06483 Chitinase C VVMO6_02417 PF00704 Glycosyl hydrolases family 18 VVMO6_02418 PF02540 NAD synthase VVMO6_02418 PF00958 GMP synthase C terminal domain VVMO6_02418 PF00117 Glutamine amidotransferase class-I VVMO6_02419 PF00571 CBS domain VVMO6_02419 PF00478 IMP dehydrogenase / GMP reductase domain VVMO6_02420 PF02601 Exonuclease VII, large subunit VVMO6_02420 PF13742 OB-fold nucleic acid binding domain VVMO6_02422 PF13185 GAF domain VVMO6_02422 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02424 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VVMO6_02424 PF01926 50S ribosome-binding GTPase VVMO6_02425 PF13360 PQQ-like domain VVMO6_02426 PF09976 Tetratricopeptide repeat-like domain VVMO6_02427 PF13393 Histidyl-tRNA synthetase VVMO6_02427 PF03129 Anticodon binding domain VVMO6_02428 PF04551 GcpE protein VVMO6_02429 PF13464 Domain of unknown function (DUF4115) VVMO6_02430 PF04055 Radical SAM superfamily VVMO6_02431 PF00334 Nucleoside diphosphate kinase VVMO6_02432 PF00883 Cytosol aminopeptidase family, catalytic domain VVMO6_02432 PF12404 Peptidase VVMO6_02433 PF04384 Iron-sulphur cluster assembly VVMO6_02434 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_02435 PF00012 Hsp70 protein VVMO6_02436 PF07743 HSCB C-terminal oligomerisation domain VVMO6_02436 PF00226 DnaJ domain VVMO6_02437 PF01521 Iron-sulphur cluster biosynthesis VVMO6_02438 PF01592 NifU-like N terminal domain VVMO6_02439 PF00266 Aminotransferase class-V VVMO6_02440 PF02082 Transcriptional regulator VVMO6_02441 PF00588 SpoU rRNA Methylase family VVMO6_02442 PF00459 Inositol monophosphatase family VVMO6_02445 PF02355 Protein export membrane protein VVMO6_02445 PF07549 SecD/SecF GG Motif VVMO6_02446 PF07549 SecD/SecF GG Motif VVMO6_02446 PF13721 SecD export protein N-terminal TM region VVMO6_02446 PF02355 Protein export membrane protein VVMO6_02447 PF02699 Preprotein translocase subunit VVMO6_02448 PF01702 Queuine tRNA-ribosyltransferase VVMO6_02449 PF02547 Queuosine biosynthesis protein VVMO6_02451 PF00571 CBS domain VVMO6_02452 PF00463 Isocitrate lyase family VVMO6_02453 PF01274 Malate synthase VVMO6_02454 PF03466 LysR substrate binding domain VVMO6_02454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02455 PF00578 AhpC/TSA family VVMO6_02455 PF10417 C-terminal domain of 1-Cys peroxiredoxin VVMO6_02457 PF03932 CutC family VVMO6_02458 PF03976 Polyphosphate kinase 2 (PPK2) VVMO6_02459 PF03466 LysR substrate binding domain VVMO6_02459 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02463 PF01895 PhoU domain VVMO6_02464 PF00005 ABC transporter VVMO6_02465 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02466 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02467 PF02503 Polyphosphate kinase middle domain VVMO6_02467 PF17941 Polyphosphate kinase C-terminal domain 1 VVMO6_02467 PF13089 Polyphosphate kinase N-terminal domain VVMO6_02467 PF13090 Polyphosphate kinase C-terminal domain 2 VVMO6_02468 PF02541 Ppx/GppA phosphatase family VVMO6_02469 PF12849 PBP superfamily domain VVMO6_02470 PF11808 Phosphate regulon sensor protein PhoR VVMO6_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02470 PF00989 PAS fold VVMO6_02470 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02471 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02471 PF00072 Response regulator receiver domain VVMO6_02472 PF04381 Putative exonuclease, RdgC VVMO6_02474 PF00037 4Fe-4S binding domain VVMO6_02475 PF03411 Penicillin-insensitive murein endopeptidase VVMO6_02477 PF07724 AAA domain (Cdc48 subfamily) VVMO6_02477 PF17871 AAA lid domain VVMO6_02477 PF02861 Clp amino terminal domain, pathogenicity island component VVMO6_02477 PF10431 C-terminal, D2-small domain, of ClpB protein VVMO6_02477 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_02479 PF01479 S4 domain VVMO6_02479 PF00849 RNA pseudouridylate synthase VVMO6_02480 PF13525 Outer membrane lipoprotein VVMO6_02482 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VVMO6_02483 PF00800 Prephenate dehydratase VVMO6_02483 PF01817 Chorismate mutase type II VVMO6_02484 PF01931 Protein of unknown function DUF84 VVMO6_02485 PF01371 Trp repressor protein VVMO6_02486 PF14718 Soluble lytic murein transglycosylase L domain VVMO6_02486 PF01464 Transglycosylase SLT domain VVMO6_02487 PF12848 ABC transporter VVMO6_02487 PF00005 ABC transporter VVMO6_02488 PF07238 PilZ domain VVMO6_02489 PF04225 Opacity-associated protein A LysM-like domain VVMO6_02489 PF01551 Peptidase family M23 VVMO6_02490 PF02153 Prephenate dehydrogenase VVMO6_02490 PF01817 Chorismate mutase type II VVMO6_02491 PF00793 DAHP synthetase I family VVMO6_02492 PF00933 Glycosyl hydrolase family 3 N terminal domain VVMO6_02493 PF03702 Anhydro-N-acetylmuramic acid kinase VVMO6_02497 PF02554 Carbon starvation protein CstA VVMO6_02498 PF07694 5TMR of 5TMR-LYT VVMO6_02498 PF06580 Histidine kinase VVMO6_02499 PF04397 LytTr DNA-binding domain VVMO6_02499 PF00072 Response regulator receiver domain VVMO6_02500 PF02401 LytB protein VVMO6_02501 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_02502 PF01252 Signal peptidase (SPase) II VVMO6_02503 PF06827 Zinc finger found in FPG and IleRS VVMO6_02503 PF00133 tRNA synthetases class I (I, L, M and V) VVMO6_02503 PF08264 Anticodon-binding domain of tRNA VVMO6_02504 PF01687 Riboflavin kinase VVMO6_02504 PF06574 FAD synthetase VVMO6_02505 PF03023 Lipid II flippase MurJ VVMO6_02506 PF01649 Ribosomal protein S20 VVMO6_02507 PF01022 Bacterial regulatory protein, arsR family VVMO6_02508 PF03466 LysR substrate binding domain VVMO6_02508 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02509 PF02690 Na+/Pi-cotransporter VVMO6_02511 PF00303 Thymidylate synthase VVMO6_02512 PF01790 Prolipoprotein diacylglyceryl transferase VVMO6_02513 PF01925 Sulfite exporter TauE/SafE VVMO6_02514 PF00391 PEP-utilising enzyme, mobile domain VVMO6_02514 PF01590 GAF domain VVMO6_02514 PF05524 PEP-utilising enzyme, N-terminal VVMO6_02514 PF02896 PEP-utilising enzyme, TIM barrel domain VVMO6_02515 PF00293 NUDIX domain VVMO6_02516 PF02976 DNA mismatch repair enzyme MutH VVMO6_02518 PF00248 Aldo/keto reductase family VVMO6_02521 PF02830 V4R domain VVMO6_02521 PF00158 Sigma-54 interaction domain VVMO6_02521 PF02954 Bacterial regulatory protein, Fis family VVMO6_02521 PF06505 Activator of aromatic catabolism VVMO6_02522 PF01336 OB-fold nucleic acid binding domain VVMO6_02522 PF00152 tRNA synthetases class II (D, K and N) VVMO6_02523 PF00472 RF-1 domain VVMO6_02523 PF03462 PCRF domain VVMO6_02524 PF17768 RecJ OB domain VVMO6_02524 PF02272 DHHA1 domain VVMO6_02524 PF01368 DHH family VVMO6_02525 PF13098 Thioredoxin-like domain VVMO6_02525 PF10411 Disulfide bond isomerase protein N-terminus VVMO6_02526 PF00589 Phage integrase family VVMO6_02526 PF02899 Phage integrase, N-terminal SAM-like domain VVMO6_02527 PF00258 Flavodoxin VVMO6_02528 PF05525 Branched-chain amino acid transport protein VVMO6_02529 PF05175 Methyltransferase small domain VVMO6_02531 PF00270 DEAD/DEAH box helicase VVMO6_02531 PF00271 Helicase conserved C-terminal domain VVMO6_02532 PF03883 Peroxide stress protein YaaA VVMO6_02533 PF01235 Sodium:alanine symporter family VVMO6_02537 PF03167 Uracil DNA glycosylase superfamily VVMO6_02538 PF01261 Xylose isomerase-like TIM barrel VVMO6_02539 PF01228 Glycine radical VVMO6_02540 PF14821 Threonine synthase N terminus VVMO6_02540 PF00291 Pyridoxal-phosphate dependent enzyme VVMO6_02541 PF00288 GHMP kinases N terminal domain VVMO6_02541 PF08544 GHMP kinases C terminal VVMO6_02542 PF00696 Amino acid kinase family VVMO6_02542 PF03447 Homoserine dehydrogenase, NAD binding domain VVMO6_02542 PF00742 Homoserine dehydrogenase VVMO6_02542 PF01842 ACT domain VVMO6_02542 PF13840 ACT domain VVMO6_02544 PF03737 Aldolase/RraA VVMO6_02546 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02546 PF00072 Response regulator receiver domain VVMO6_02548 PF00989 PAS fold VVMO6_02548 PF00072 Response regulator receiver domain VVMO6_02548 PF01627 Hpt domain VVMO6_02548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02548 PF18415 Histidine kinase receptor ArcB trans-membrane domain VVMO6_02548 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02550 PF00563 EAL domain VVMO6_02550 PF01590 GAF domain VVMO6_02550 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02550 PF00360 Phytochrome region VVMO6_02551 PF04055 Radical SAM superfamily VVMO6_02551 PF16199 Radical_SAM C-terminal domain VVMO6_02552 PF04898 Glutamate synthase central domain VVMO6_02552 PF01645 Conserved region in glutamate synthase VVMO6_02552 PF01493 GXGXG motif VVMO6_02552 PF00310 Glutamine amidotransferases class-II VVMO6_02553 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VVMO6_02553 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_02554 PF04898 Glutamate synthase central domain VVMO6_02554 PF01645 Conserved region in glutamate synthase VVMO6_02554 PF00310 Glutamine amidotransferases class-II VVMO6_02554 PF01493 GXGXG motif VVMO6_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VVMO6_02557 PF01048 Phosphorylase superfamily VVMO6_02558 PF17113 Regulatory signalling modulator protein AmpE VVMO6_02558 PF03186 CobD/Cbib protein VVMO6_02559 PF01497 Periplasmic binding protein VVMO6_02560 PF03458 UPF0126 domain VVMO6_02561 PF03466 LysR substrate binding domain VVMO6_02561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02562 PF01925 Sulfite exporter TauE/SafE VVMO6_02564 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VVMO6_02564 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VVMO6_02564 PF02142 MGS-like domain VVMO6_02565 PF00117 Glutamine amidotransferase class-I VVMO6_02565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VVMO6_02566 PF05173 Dihydrodipicolinate reductase, C-terminus VVMO6_02566 PF01113 Dihydrodipicolinate reductase, N-terminus VVMO6_02567 PF00293 NUDIX domain VVMO6_02568 PF07516 SecA Wing and Scaffold domain VVMO6_02568 PF01043 SecA preprotein cross-linking domain VVMO6_02568 PF02810 SEC-C motif VVMO6_02568 PF07517 SecA DEAD-like domain VVMO6_02571 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VVMO6_02572 PF00091 Tubulin/FtsZ family, GTPase domain VVMO6_02572 PF12327 FtsZ family, C-terminal domain VVMO6_02573 PF02491 SHS2 domain inserted in FTSA VVMO6_02574 PF08478 POTRA domain, FtsQ-type VVMO6_02574 PF03799 Cell division protein FtsQ VVMO6_02576 PF08245 Mur ligase middle domain VVMO6_02576 PF02875 Mur ligase family, glutamate ligase domain VVMO6_02576 PF01225 Mur ligase family, catalytic domain VVMO6_02577 PF03033 Glycosyltransferase family 28 N-terminal domain VVMO6_02577 PF04101 Glycosyltransferase family 28 C-terminal domain VVMO6_02578 PF01098 Cell cycle protein VVMO6_02579 PF02875 Mur ligase family, glutamate ligase domain VVMO6_02579 PF08245 Mur ligase middle domain VVMO6_02580 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VVMO6_02580 PF00953 Glycosyl transferase family 4 VVMO6_02581 PF01225 Mur ligase family, catalytic domain VVMO6_02581 PF02875 Mur ligase family, glutamate ligase domain VVMO6_02581 PF08245 Mur ligase middle domain VVMO6_02582 PF08245 Mur ligase middle domain VVMO6_02582 PF02875 Mur ligase family, glutamate ligase domain VVMO6_02582 PF01225 Mur ligase family, catalytic domain VVMO6_02583 PF00905 Penicillin binding protein transpeptidase domain VVMO6_02583 PF03717 Penicillin-binding Protein dimerisation domain VVMO6_02584 PF04999 Cell division protein FtsL VVMO6_02585 PF01795 MraW methylase family VVMO6_02586 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VVMO6_02587 PF04348 LppC putative lipoprotein VVMO6_02588 PF02021 Uncharacterised protein family UPF0102 VVMO6_02589 PF13580 SIS domain VVMO6_02590 PF04972 BON domain VVMO6_02591 PF04386 Stringent starvation protein B VVMO6_02592 PF00043 Glutathione S-transferase, C-terminal domain VVMO6_02592 PF02798 Glutathione S-transferase, N-terminal domain VVMO6_02593 PF02167 Cytochrome C1 family VVMO6_02594 PF00033 Cytochrome b/b6/petB VVMO6_02594 PF00032 Cytochrome b(C-terminal)/b6/petD VVMO6_02595 PF00355 Rieske [2Fe-2S] domain VVMO6_02595 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VVMO6_02596 PF00380 Ribosomal protein S9/S16 VVMO6_02597 PF00572 Ribosomal protein L13 VVMO6_02598 PF03969 AFG1-like ATPase VVMO6_02599 PF06295 Protein of unknown function (DUF1043) VVMO6_02600 PF00595 PDZ domain VVMO6_02601 PF13180 PDZ domain VVMO6_02602 PF00521 DNA gyrase/topoisomerase IV, subunit A VVMO6_02602 PF03989 DNA gyrase C-terminal domain, beta-propeller VVMO6_02603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02603 PF01751 Toprim domain VVMO6_02603 PF00986 DNA gyrase B subunit, carboxyl terminus VVMO6_02603 PF00204 DNA gyrase B VVMO6_02604 PF05728 Uncharacterised protein family (UPF0227) VVMO6_02605 PF00149 Calcineurin-like phosphoesterase VVMO6_02606 PF06853 Protein of unknown function (DUF1249) VVMO6_02607 PF00293 NUDIX domain VVMO6_02608 PF02321 Outer membrane efflux protein VVMO6_02609 PF00294 pfkB family carbohydrate kinase VVMO6_02609 PF01467 Cytidylyltransferase-like VVMO6_02610 PF08335 GlnD PII-uridylyltransferase VVMO6_02610 PF03710 Glutamate-ammonia ligase adenylyltransferase VVMO6_02611 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_02611 PF00672 HAMP domain VVMO6_02611 PF12729 Four helix bundle sensory module for signal transduction VVMO6_02613 PF07885 Ion channel VVMO6_02614 PF01928 CYTH domain VVMO6_02615 PF01865 Protein of unknown function DUF47 VVMO6_02616 PF01384 Phosphate transporter family VVMO6_02617 PF08239 Bacterial SH3 domain VVMO6_02618 PF01471 Putative peptidoglycan binding domain VVMO6_02618 PF13401 AAA domain VVMO6_02619 PF01743 Poly A polymerase head domain VVMO6_02619 PF12627 Probable RNA and SrmB- binding site of polymerase A VVMO6_02619 PF01966 HD domain VVMO6_02620 PF02673 Bacitracin resistance protein BacA VVMO6_02621 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VVMO6_02622 PF02152 Dihydroneopterin aldolase VVMO6_02623 PF02660 Glycerol-3-phosphate acyltransferase VVMO6_02624 PF00561 alpha/beta hydrolase fold VVMO6_02625 PF00814 Glycoprotease family VVMO6_02626 PF01165 Ribosomal protein S21 VVMO6_02627 PF09424 Yqey-like protein VVMO6_02628 PF08275 DNA primase catalytic core, N-terminal domain VVMO6_02628 PF01807 CHC2 zinc finger VVMO6_02628 PF08278 DNA primase DnaG DnaB-binding VVMO6_02628 PF10410 DnaB-helicase binding domain of primase VVMO6_02629 PF03979 Sigma-70 factor, region 1.1 VVMO6_02629 PF04539 Sigma-70 region 3 VVMO6_02629 PF04546 Sigma-70, non-essential region VVMO6_02629 PF04545 Sigma-70, region 4 VVMO6_02629 PF04542 Sigma-70 region 2 VVMO6_02629 PF00140 Sigma-70 factor, region 1.2 VVMO6_02632 PF03480 Bacterial extracellular solute-binding protein, family 7 VVMO6_02633 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_02633 PF02378 Phosphotransferase system, EIIC VVMO6_02633 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VVMO6_02634 PF01232 Mannitol dehydrogenase Rossmann domain VVMO6_02634 PF08125 Mannitol dehydrogenase C-terminal domain VVMO6_02635 PF05068 Mannitol repressor VVMO6_02636 PF01380 SIS domain VVMO6_02637 PF00455 DeoR C terminal sensor domain VVMO6_02637 PF08220 DeoR-like helix-turn-helix domain VVMO6_02638 PF00224 Pyruvate kinase, barrel domain VVMO6_02638 PF02887 Pyruvate kinase, alpha/beta domain VVMO6_02641 PF07694 5TMR of 5TMR-LYT VVMO6_02641 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02642 PF10369 Small subunit of acetolactate synthase VVMO6_02643 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VVMO6_02643 PF00205 Thiamine pyrophosphate enzyme, central domain VVMO6_02643 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VVMO6_02644 PF00501 AMP-binding enzyme VVMO6_02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02645 PF03466 LysR substrate binding domain VVMO6_02647 PF01569 PAP2 superfamily VVMO6_02650 PF08502 LeuA allosteric (dimerisation) domain VVMO6_02650 PF00682 HMGL-like VVMO6_02651 PF00180 Isocitrate/isopropylmalate dehydrogenase VVMO6_02652 PF00330 Aconitase family (aconitate hydratase) VVMO6_02653 PF00694 Aconitase C-terminal domain VVMO6_02655 PF00226 DnaJ domain VVMO6_02655 PF05099 Tellurite resistance protein TerB VVMO6_02656 PF04453 LPS transport system D VVMO6_02656 PF03968 OstA-like protein VVMO6_02657 PF09312 SurA N-terminal domain VVMO6_02657 PF00639 PPIC-type PPIASE domain VVMO6_02658 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VVMO6_02659 PF00398 Ribosomal RNA adenine dimethylase VVMO6_02660 PF04379 ApaG domain VVMO6_02661 PF00149 Calcineurin-like phosphoesterase VVMO6_02662 PF00186 Dihydrofolate reductase VVMO6_02663 PF12821 Threonine/Serine exporter, ThrE VVMO6_02664 PF06738 Putative threonine/serine exporter VVMO6_02665 PF01018 GTP1/OBG VVMO6_02665 PF01926 50S ribosome-binding GTPase VVMO6_02666 PF01016 Ribosomal L27 protein VVMO6_02667 PF00829 Ribosomal prokaryotic L21 protein VVMO6_02668 PF00348 Polyprenyl synthetase VVMO6_02669 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VVMO6_02669 PF00056 lactate/malate dehydrogenase, NAD binding domain VVMO6_02670 PF01316 Arginine repressor, DNA binding domain VVMO6_02670 PF02863 Arginine repressor, C-terminal domain VVMO6_02671 PF16868 NMT1-like family VVMO6_02673 PF00582 Universal stress protein family VVMO6_02674 PF01553 Acyltransferase VVMO6_02675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VVMO6_02676 PF01722 BolA-like protein VVMO6_02678 PF05494 MlaC protein VVMO6_02679 PF02470 MlaD protein VVMO6_02680 PF02405 Permease MlaE VVMO6_02681 PF00005 ABC transporter VVMO6_02682 PF01699 Sodium/calcium exchanger protein VVMO6_02683 PF01380 SIS domain VVMO6_02683 PF00571 CBS domain VVMO6_02686 PF03968 OstA-like protein VVMO6_02687 PF12399 Branched-chain amino acid ATP-binding cassette transporter VVMO6_02687 PF00005 ABC transporter VVMO6_02688 PF04552 Sigma-54, DNA binding domain VVMO6_02688 PF00309 Sigma-54 factor, Activator interacting domain (AID) VVMO6_02688 PF04963 Sigma-54 factor, core binding domain VVMO6_02689 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VVMO6_02690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_02691 PF03668 P-loop ATPase protein family VVMO6_02692 PF00381 PTS HPr component phosphorylation site VVMO6_02693 PF03448 MgtE intracellular N domain VVMO6_02693 PF01769 Divalent cation transporter VVMO6_02693 PF00571 CBS domain VVMO6_02694 PF01523 Putative modulator of DNA gyrase VVMO6_02695 PF04751 Protein of unknown function (DUF615) VVMO6_02696 PF00005 ABC transporter VVMO6_02697 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02699 PF02441 Flavoprotein VVMO6_02701 PF08245 Mur ligase middle domain VVMO6_02701 PF01225 Mur ligase family, catalytic domain VVMO6_02701 PF02875 Mur ligase family, glutamate ligase domain VVMO6_02702 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VVMO6_02703 PF00719 Inorganic pyrophosphatase VVMO6_02705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VVMO6_02706 PF04357 TamB, inner membrane protein subunit of TAM complex VVMO6_02707 PF01103 Surface antigen VVMO6_02707 PF07244 Surface antigen variable number repeat VVMO6_02707 PF17243 POTRA domain TamA domain 1 VVMO6_02708 PF01625 Peptide methionine sulfoxide reductase VVMO6_02710 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VVMO6_02713 PF00005 ABC transporter VVMO6_02713 PF12704 MacB-like periplasmic core domain VVMO6_02713 PF02687 FtsX-like permease family VVMO6_02718 PF02080 TrkA-C domain VVMO6_02718 PF03600 Citrate transporter VVMO6_02719 PF00009 Elongation factor Tu GTP binding domain VVMO6_02720 PF01507 Phosphoadenosine phosphosulfate reductase family VVMO6_02721 PF10414 Sirohaem synthase dimerisation region VVMO6_02721 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VVMO6_02721 PF14824 Sirohaem biosynthesis protein central VVMO6_02722 PF00149 Calcineurin-like phosphoesterase VVMO6_02722 PF02872 5'-nucleotidase, C-terminal domain VVMO6_02724 PF13673 Acetyltransferase (GNAT) domain VVMO6_02726 PF08525 Opacity-associated protein A N-terminal motif VVMO6_02726 PF04225 Opacity-associated protein A LysM-like domain VVMO6_02727 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_02727 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VVMO6_02729 PF01196 Ribosomal protein L17 VVMO6_02730 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VVMO6_02730 PF01000 RNA polymerase Rpb3/RpoA insert domain VVMO6_02730 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VVMO6_02731 PF01479 S4 domain VVMO6_02731 PF00163 Ribosomal protein S4/S9 N-terminal domain VVMO6_02732 PF00411 Ribosomal protein S11 VVMO6_02733 PF00416 Ribosomal protein S13/S18 VVMO6_02734 PF00444 Ribosomal protein L36 VVMO6_02735 PF00344 SecY translocase VVMO6_02736 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VVMO6_02737 PF00327 Ribosomal protein L30p/L7e VVMO6_02738 PF03719 Ribosomal protein S5, C-terminal domain VVMO6_02738 PF00333 Ribosomal protein S5, N-terminal domain VVMO6_02739 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VVMO6_02740 PF00347 Ribosomal protein L6 VVMO6_02741 PF00410 Ribosomal protein S8 VVMO6_02742 PF00253 Ribosomal protein S14p/S29e VVMO6_02743 PF00281 Ribosomal protein L5 VVMO6_02743 PF00673 ribosomal L5P family C-terminus VVMO6_02744 PF00467 KOW motif VVMO6_02744 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VVMO6_02745 PF00238 Ribosomal protein L14p/L23e VVMO6_02746 PF00366 Ribosomal protein S17 VVMO6_02747 PF00831 Ribosomal L29 protein VVMO6_02748 PF00252 Ribosomal protein L16p/L10e VVMO6_02749 PF00189 Ribosomal protein S3, C-terminal domain VVMO6_02749 PF07650 KH domain VVMO6_02750 PF00237 Ribosomal protein L22p/L17e VVMO6_02751 PF00203 Ribosomal protein S19 VVMO6_02752 PF00181 Ribosomal Proteins L2, RNA binding domain VVMO6_02752 PF03947 Ribosomal Proteins L2, C-terminal domain VVMO6_02753 PF00276 Ribosomal protein L23 VVMO6_02754 PF00573 Ribosomal protein L4/L1 family VVMO6_02755 PF00297 Ribosomal protein L3 VVMO6_02756 PF00338 Ribosomal protein S10p/S20e VVMO6_02757 PF13322 Domain of unknown function (DUF4092) VVMO6_02757 PF17291 N-terminal domain of M60-like peptidases VVMO6_02757 PF13402 Peptidase M60, enhancin and enhancin-like VVMO6_02759 PF00753 Metallo-beta-lactamase superfamily VVMO6_02759 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VVMO6_02759 PF10996 Beta-Casp domain VVMO6_02763 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VVMO6_02763 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VVMO6_02763 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VVMO6_02764 PF02719 Polysaccharide biosynthesis protein VVMO6_02765 PF02397 Bacterial sugar transferase VVMO6_02766 PF01370 NAD dependent epimerase/dehydratase family VVMO6_02768 PF02350 UDP-N-acetylglucosamine 2-epimerase VVMO6_02770 PF08485 Polysaccharide biosynthesis protein C-terminal VVMO6_02770 PF02719 Polysaccharide biosynthesis protein VVMO6_02771 PF00534 Glycosyl transferases group 1 VVMO6_02775 PF01370 NAD dependent epimerase/dehydratase family VVMO6_02776 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VVMO6_02776 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VVMO6_02776 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VVMO6_02778 PF13614 AAA domain VVMO6_02778 PF13807 G-rich domain on putative tyrosine kinase VVMO6_02778 PF02706 Chain length determinant protein VVMO6_02779 PF01451 Low molecular weight phosphotyrosine protein phosphatase VVMO6_02782 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VVMO6_02782 PF10531 SLBB domain VVMO6_02782 PF02563 Polysaccharide biosynthesis/export protein VVMO6_02789 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VVMO6_02791 PF06082 Exopolysaccharide biosynthesis protein YbjH VVMO6_02792 PF01370 NAD dependent epimerase/dehydratase family VVMO6_02793 PF03279 Bacterial lipid A biosynthesis acyltransferase VVMO6_02794 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VVMO6_02795 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VVMO6_02799 PF02348 Cytidylyltransferase VVMO6_02800 PF00483 Nucleotidyl transferase VVMO6_02803 PF02350 UDP-N-acetylglucosamine 2-epimerase VVMO6_02804 PF08666 SAF domain VVMO6_02804 PF03102 NeuB family VVMO6_02806 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VVMO6_02807 PF02719 Polysaccharide biosynthesis protein VVMO6_02809 PF00884 Sulfatase VVMO6_02809 PF11893 Domain of unknown function (DUF3413) VVMO6_02811 PF01219 Prokaryotic diacylglycerol kinase VVMO6_02812 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VVMO6_02813 PF00535 Glycosyl transferase family 2 VVMO6_02814 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VVMO6_02815 PF01467 Cytidylyltransferase-like VVMO6_02817 PF06827 Zinc finger found in FPG and IleRS VVMO6_02817 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VVMO6_02817 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VVMO6_02819 PF00471 Ribosomal protein L33 VVMO6_02820 PF00830 Ribosomal L28 family VVMO6_02821 PF04002 RadC-like JAB domain VVMO6_02822 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_02822 PF00672 HAMP domain VVMO6_02822 PF02743 Cache domain VVMO6_02823 PF02441 Flavoprotein VVMO6_02823 PF04127 DNA / pantothenate metabolism flavoprotein VVMO6_02824 PF00440 Bacterial regulatory proteins, tetR family VVMO6_02825 PF03279 Bacterial lipid A biosynthesis acyltransferase VVMO6_02826 PF00156 Phosphoribosyl transferase domain VVMO6_02827 PF03725 3' exoribonuclease family, domain 2 VVMO6_02827 PF01138 3' exoribonuclease family, domain 1 VVMO6_02828 PF03755 YicC-like family, N-terminal region VVMO6_02828 PF08340 Domain of unknown function (DUF1732) VVMO6_02829 PF00892 EamA-like transporter family VVMO6_02832 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02832 PF00005 ABC transporter VVMO6_02833 PF00005 ABC transporter VVMO6_02833 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02834 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_02835 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_02835 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02836 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02837 PF00593 TonB dependent receptor VVMO6_02837 PF07715 TonB-dependent Receptor Plug Domain VVMO6_02839 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_02840 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_02841 PF02472 Biopolymer transport protein ExbD/TolR VVMO6_02844 PF00625 Guanylate kinase VVMO6_02845 PF01192 RNA polymerase Rpb6 VVMO6_02846 PF02824 TGS domain VVMO6_02846 PF13291 ACT domain VVMO6_02846 PF04607 Region found in RelA / SpoT proteins VVMO6_02847 PF12105 SpoU, rRNA methylase, C-terminal VVMO6_02847 PF00588 SpoU rRNA Methylase family VVMO6_02848 PF17191 RecG wedge domain VVMO6_02848 PF00270 DEAD/DEAH box helicase VVMO6_02848 PF00271 Helicase conserved C-terminal domain VVMO6_02849 PF00860 Permease family VVMO6_02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02850 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02850 PF00672 HAMP domain VVMO6_02851 PF00486 Transcriptional regulatory protein, C terminal VVMO6_02851 PF00072 Response regulator receiver domain VVMO6_02852 PF03449 Transcription elongation factor, N-terminal VVMO6_02852 PF01272 Transcription elongation factor, GreA/GreB, C-term VVMO6_02853 PF17674 HHH domain VVMO6_02853 PF00575 S1 RNA binding domain VVMO6_02853 PF09371 Tex-like protein N-terminal domain VVMO6_02853 PF16921 Tex protein YqgF-like domain VVMO6_02855 PF00561 alpha/beta hydrolase fold VVMO6_02856 PF00156 Phosphoribosyl transferase domain VVMO6_02858 PF01106 NifU-like domain VVMO6_02858 PF01521 Iron-sulphur cluster biosynthesis VVMO6_02859 PF00293 NUDIX domain VVMO6_02860 PF00459 Inositol monophosphatase family VVMO6_02861 PF01203 Type II secretion system (T2SS), protein N VVMO6_02862 PF04612 Type II secretion system (T2SS), protein M VVMO6_02863 PF05134 Type II secretion system (T2SS), protein L VVMO6_02863 PF12693 GspL periplasmic domain VVMO6_02864 PF03934 Type II secretion system (T2SS), protein K VVMO6_02865 PF07963 Prokaryotic N-terminal methylation motif VVMO6_02865 PF11612 Type II secretion system (T2SS), protein J VVMO6_02866 PF07963 Prokaryotic N-terminal methylation motif VVMO6_02866 PF02501 Type II secretion system (T2SS), protein I VVMO6_02867 PF12019 Type II transport protein GspH VVMO6_02868 PF08334 Type II secretion system (T2SS), protein G VVMO6_02868 PF07963 Prokaryotic N-terminal methylation motif VVMO6_02869 PF00482 Type II secretion system (T2SS), protein F VVMO6_02870 PF00437 Type II/IV secretion system protein VVMO6_02871 PF00263 Bacterial type II and III secretion system protein VVMO6_02871 PF03958 Bacterial type II/III secretion system short domain VVMO6_02872 PF11356 Type II secretion system protein C VVMO6_02873 PF01479 S4 domain VVMO6_02874 PF01430 Hsp33 protein VVMO6_02875 PF01293 Phosphoenolpyruvate carboxykinase VVMO6_02877 PF00583 Acetyltransferase (GNAT) family VVMO6_02877 PF09500 Putative thioesterase (yiiD_Cterm) VVMO6_02878 PF02580 D-Tyr-tRNA(Tyr) deacylase VVMO6_02879 PF03631 Virulence factor BrkB VVMO6_02883 PF00120 Glutamine synthetase, catalytic domain VVMO6_02883 PF03951 Glutamine synthetase, beta-Grasp domain VVMO6_02885 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02885 PF00989 PAS fold VVMO6_02886 PF00158 Sigma-54 interaction domain VVMO6_02886 PF00072 Response regulator receiver domain VVMO6_02886 PF02954 Bacterial regulatory protein, Fis family VVMO6_02887 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02887 PF00563 EAL domain VVMO6_02887 PF03707 Bacterial signalling protein N terminal repeat VVMO6_02888 PF06969 HemN C-terminal domain VVMO6_02888 PF04055 Radical SAM superfamily VVMO6_02889 PF10675 Protein of unknown function (DUF2489) VVMO6_02890 PF04220 Der GTPase activator (YihI) VVMO6_02893 PF00034 Cytochrome c VVMO6_02894 PF01926 50S ribosome-binding GTPase VVMO6_02895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VVMO6_02895 PF01612 3'-5' exonuclease VVMO6_02895 PF00476 DNA polymerase family A VVMO6_02895 PF01367 5'-3' exonuclease, C-terminal SAM fold VVMO6_02896 PF00490 Delta-aminolevulinic acid dehydratase VVMO6_02897 PF01026 TatD related DNase VVMO6_02899 PF00902 Sec-independent protein translocase protein (TatC) VVMO6_02900 PF02416 mttA/Hcf106 family VVMO6_02901 PF02416 mttA/Hcf106 family VVMO6_02902 PF03109 ABC1 family VVMO6_02903 PF02036 SCP-2 sterol transfer family VVMO6_02904 PF01209 ubiE/COQ5 methyltransferase family VVMO6_02905 PF02646 RmuC family VVMO6_02908 PF13358 DDE superfamily endonuclease VVMO6_02912 PF00175 Oxidoreductase NAD-binding domain VVMO6_02913 PF00175 Oxidoreductase NAD-binding domain VVMO6_02913 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_02913 PF00970 Oxidoreductase FAD-binding domain VVMO6_02914 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VVMO6_02916 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VVMO6_02916 PF07498 Rho termination factor, N-terminal domain VVMO6_02916 PF07497 Rho termination factor, RNA-binding domain VVMO6_02917 PF00085 Thioredoxin VVMO6_02918 PF00270 DEAD/DEAH box helicase VVMO6_02918 PF00271 Helicase conserved C-terminal domain VVMO6_02919 PF02541 Ppx/GppA phosphatase family VVMO6_02920 PF02592 Putative vitamin uptake transporter VVMO6_02922 PF16124 RecQ zinc-binding VVMO6_02922 PF00570 HRDC domain VVMO6_02922 PF00271 Helicase conserved C-terminal domain VVMO6_02922 PF00270 DEAD/DEAH box helicase VVMO6_02922 PF09382 RQC domain VVMO6_02923 PF00892 EamA-like transporter family VVMO6_02925 PF01810 LysE type translocator VVMO6_02926 PF00580 UvrD/REP helicase N-terminal domain VVMO6_02926 PF13361 UvrD-like helicase C-terminal domain VVMO6_02929 PF05114 Protein of unknown function (DUF692) VVMO6_02934 PF07690 Major Facilitator Superfamily VVMO6_02935 PF03466 LysR substrate binding domain VVMO6_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02936 PF00557 Metallopeptidase family M24 VVMO6_02936 PF01321 Creatinase/Prolidase N-terminal domain VVMO6_02936 PF00557 Metallopeptidase family M24 VVMO6_02936 PF01321 Creatinase/Prolidase N-terminal domain VVMO6_02937 PF06968 Biotin and Thiamin Synthesis associated domain VVMO6_02937 PF04055 Radical SAM superfamily VVMO6_02938 PF05690 Thiazole biosynthesis protein ThiG VVMO6_02940 PF00899 ThiF family VVMO6_02941 PF02581 Thiamine monophosphate synthase VVMO6_02942 PF13667 ThiC-associated domain VVMO6_02942 PF01964 Radical SAM ThiC family VVMO6_02943 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VVMO6_02944 PF07732 Multicopper oxidase VVMO6_02944 PF00394 Multicopper oxidase VVMO6_02944 PF07731 Multicopper oxidase VVMO6_02948 PF13358 DDE superfamily endonuclease VVMO6_02950 PF12724 Flavodoxin domain VVMO6_02951 PF02386 Cation transport protein VVMO6_02952 PF01205 Uncharacterized protein family UPF0029 VVMO6_02952 PF09186 Domain of unknown function (DUF1949) VVMO6_02953 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_02953 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VVMO6_02953 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VVMO6_02954 PF02803 Thiolase, C-terminal domain VVMO6_02954 PF00108 Thiolase, N-terminal domain VVMO6_02955 PF00107 Zinc-binding dehydrogenase VVMO6_02955 PF08240 Alcohol dehydrogenase GroES-like domain VVMO6_02956 PF03466 LysR substrate binding domain VVMO6_02956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02958 PF01206 Sulfurtransferase TusA VVMO6_02960 PF01169 Uncharacterized protein family UPF0016 VVMO6_02961 PF02091 Glycyl-tRNA synthetase alpha subunit VVMO6_02962 PF02092 Glycyl-tRNA synthetase beta subunit VVMO6_02962 PF05746 DALR anticodon binding domain VVMO6_02964 PF00155 Aminotransferase class I and II VVMO6_02965 PF00563 EAL domain VVMO6_02965 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_02965 PF03707 Bacterial signalling protein N terminal repeat VVMO6_02966 PF00011 Hsp20/alpha crystallin family VVMO6_02967 PF00986 DNA gyrase B subunit, carboxyl terminus VVMO6_02967 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02967 PF01751 Toprim domain VVMO6_02967 PF18053 DNA gyrase B subunit insert domain VVMO6_02967 PF00204 DNA gyrase B VVMO6_02968 PF02463 RecF/RecN/SMC N terminal domain VVMO6_02969 PF02767 DNA polymerase III beta subunit, central domain VVMO6_02969 PF00712 DNA polymerase III beta subunit, N-terminal domain VVMO6_02969 PF02768 DNA polymerase III beta subunit, C-terminal domain VVMO6_02970 PF11638 DnaA N-terminal domain VVMO6_02970 PF08299 Bacterial dnaA protein helix-turn-helix VVMO6_02970 PF00308 Bacterial dnaA protein VVMO6_02972 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_02973 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_02974 PF00005 ABC transporter VVMO6_02975 PF00468 Ribosomal protein L34 VVMO6_02976 PF00825 Ribonuclease P VVMO6_02978 PF14849 YidC periplasmic domain VVMO6_02978 PF02096 60Kd inner membrane protein VVMO6_02979 PF10396 GTP-binding protein TrmE N-terminus VVMO6_02979 PF12631 MnmE helical domain VVMO6_02979 PF01926 50S ribosome-binding GTPase VVMO6_02980 PF00258 Flavodoxin VVMO6_02983 PF00005 ABC transporter VVMO6_02983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02984 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_02984 PF00005 ABC transporter VVMO6_02987 PF08719 Domain of unknown function (DUF1768) VVMO6_02987 PF00925 GTP cyclohydrolase II VVMO6_02989 PF00072 Response regulator receiver domain VVMO6_02989 PF01627 Hpt domain VVMO6_02989 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_02989 PF00672 HAMP domain VVMO6_02989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02989 PF17149 Periplasmic sensor domain found in signal transduction proteins VVMO6_02991 PF01709 Transcriptional regulator VVMO6_02993 PF03466 LysR substrate binding domain VVMO6_02993 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_02995 PF00005 ABC transporter VVMO6_02996 PF12704 MacB-like periplasmic core domain VVMO6_02996 PF02687 FtsX-like permease family VVMO6_02999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_02999 PF06580 Histidine kinase VVMO6_02999 PF07694 5TMR of 5TMR-LYT VVMO6_03000 PF04397 LytTr DNA-binding domain VVMO6_03000 PF00072 Response regulator receiver domain VVMO6_03001 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03001 PF00672 HAMP domain VVMO6_03001 PF17200 Single Cache domain 2 VVMO6_03004 PF03616 Sodium/glutamate symporter VVMO6_03005 PF03616 Sodium/glutamate symporter VVMO6_03007 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VVMO6_03010 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VVMO6_03010 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VVMO6_03012 PF03466 LysR substrate binding domain VVMO6_03012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03015 PF06029 AlkA N-terminal domain VVMO6_03015 PF00730 HhH-GPD superfamily base excision DNA repair protein VVMO6_03016 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VVMO6_03016 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VVMO6_03017 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VVMO6_03020 PF03600 Citrate transporter VVMO6_03023 PF08361 MAATS-type transcriptional repressor, C-terminal region VVMO6_03023 PF00440 Bacterial regulatory proteins, tetR family VVMO6_03025 PF00704 Glycosyl hydrolases family 18 VVMO6_03025 PF08329 Chitinase A, N-terminal domain VVMO6_03027 PF06865 Pyrimidine/purine nucleoside phosphorylase VVMO6_03028 PF02678 Pirin VVMO6_03028 PF05726 Pirin C-terminal cupin domain VVMO6_03030 PF00563 EAL domain VVMO6_03030 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03031 PF17158 Membrane-associated sensor, integral membrane domain VVMO6_03031 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03032 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VVMO6_03032 PF00128 Alpha amylase, catalytic domain VVMO6_03033 PF02264 LamB porin VVMO6_03034 PF07148 Maltose operon periplasmic protein precursor (MalM) VVMO6_03036 PF01547 Bacterial extracellular solute-binding protein VVMO6_03037 PF16657 Maltogenic Amylase, C-terminal domain VVMO6_03037 PF00128 Alpha amylase, catalytic domain VVMO6_03037 PF02903 Alpha amylase, N-terminal ig-like domain VVMO6_03039 PF18494 Pullulanase Ins domain VVMO6_03039 PF11852 Domain of unknown function (DUF3372) VVMO6_03039 PF03714 Bacterial pullanase-associated domain VVMO6_03039 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VVMO6_03039 PF17967 Pullulanase N2 domain VVMO6_03042 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VVMO6_03042 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VVMO6_03042 PF01276 Orn/Lys/Arg decarboxylase, major domain VVMO6_03043 PF13520 Amino acid permease VVMO6_03044 PF08543 Phosphomethylpyrimidine kinase VVMO6_03045 PF00375 Sodium:dicarboxylate symporter family VVMO6_03047 PF03193 RsgA GTPase VVMO6_03048 PF04314 Copper chaperone PCu(A)C VVMO6_03049 PF02630 SCO1/SenC VVMO6_03055 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03055 PF17874 MalT-like TPR region VVMO6_03056 PF00343 Carbohydrate phosphorylase VVMO6_03057 PF02446 4-alpha-glucanotransferase VVMO6_03058 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VVMO6_03058 PF02806 Alpha amylase, C-terminal all-beta domain VVMO6_03058 PF00128 Alpha amylase, catalytic domain VVMO6_03059 PF16591 Helical bimodular sensor domain VVMO6_03059 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03059 PF00672 HAMP domain VVMO6_03060 PF00919 Uncharacterized protein family UPF0004 VVMO6_03060 PF18693 TRAM domain VVMO6_03060 PF04055 Radical SAM superfamily VVMO6_03061 PF01810 LysE type translocator VVMO6_03062 PF01037 Lrp/AsnC ligand binding domain VVMO6_03064 PF01470 Pyroglutamyl peptidase VVMO6_03068 PF00672 HAMP domain VVMO6_03068 PF02743 Cache domain VVMO6_03068 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03071 PF00171 Aldehyde dehydrogenase family VVMO6_03072 PF02798 Glutathione S-transferase, N-terminal domain VVMO6_03073 PF01966 HD domain VVMO6_03074 PF02690 Na+/Pi-cotransporter VVMO6_03075 PF05193 Peptidase M16 inactive domain VVMO6_03075 PF00675 Insulinase (Peptidase family M16) VVMO6_03077 PF03466 LysR substrate binding domain VVMO6_03077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03078 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03078 PF03466 LysR substrate binding domain VVMO6_03080 PF01699 Sodium/calcium exchanger protein VVMO6_03081 PF09335 SNARE associated Golgi protein VVMO6_03083 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03083 PF08521 Two-component sensor kinase N-terminal VVMO6_03084 PF00072 Response regulator receiver domain VVMO6_03084 PF00486 Transcriptional regulatory protein, C terminal VVMO6_03087 PF00501 AMP-binding enzyme VVMO6_03089 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03092 PF02264 LamB porin VVMO6_03094 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03096 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03097 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03098 PF00232 Glycosyl hydrolase family 1 VVMO6_03100 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03103 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_03104 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03105 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_03105 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03106 PF00005 ABC transporter VVMO6_03106 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_03107 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_03107 PF00005 ABC transporter VVMO6_03109 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03111 PF00722 Glycosyl hydrolases family 16 VVMO6_03113 PF02264 LamB porin VVMO6_03114 PF12833 Helix-turn-helix domain VVMO6_03115 PF00933 Glycosyl hydrolase family 3 N terminal domain VVMO6_03115 PF01915 Glycosyl hydrolase family 3 C-terminal domain VVMO6_03115 PF14310 Fibronectin type III-like domain VVMO6_03116 PF01554 MatE VVMO6_03118 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_03118 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_03124 PF17757 UvrB interaction domain VVMO6_03124 PF00271 Helicase conserved C-terminal domain VVMO6_03124 PF04851 Type III restriction enzyme, res subunit VVMO6_03124 PF02151 UvrB/uvrC motif VVMO6_03124 PF12344 Ultra-violet resistance protein B VVMO6_03127 PF00849 RNA pseudouridylate synthase VVMO6_03128 PF00563 EAL domain VVMO6_03128 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03128 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03129 PF00873 AcrB/AcrD/AcrF family VVMO6_03132 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03133 PF02653 Branched-chain amino acid transport system / permease component VVMO6_03134 PF00005 ABC transporter VVMO6_03135 PF13407 Periplasmic binding protein domain VVMO6_03137 PF02929 Beta galactosidase small chain VVMO6_03137 PF16353 Domain of unknown function(DUF4981) VVMO6_03137 PF00703 Glycosyl hydrolases family 2 VVMO6_03137 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VVMO6_03137 PF02837 Glycosyl hydrolases family 2, sugar binding domain VVMO6_03138 PF16875 Glycosyl hydrolase family 36 N-terminal domain VVMO6_03138 PF16874 Glycosyl hydrolase family 36 C-terminal domain VVMO6_03141 PF08032 RNA 2'-O ribose methyltransferase substrate binding VVMO6_03141 PF00588 SpoU rRNA Methylase family VVMO6_03142 PF00037 4Fe-4S binding domain VVMO6_03142 PF11953 Domain of unknown function (DUF3470) VVMO6_03144 PF00593 TonB dependent receptor VVMO6_03144 PF07715 TonB-dependent Receptor Plug Domain VVMO6_03145 PF12833 Helix-turn-helix domain VVMO6_03149 PF01238 Phosphomannose isomerase type I VVMO6_03150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VVMO6_03150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_03150 PF02378 Phosphotransferase system, EIIC VVMO6_03151 PF12833 Helix-turn-helix domain VVMO6_03153 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VVMO6_03155 PF00155 Aminotransferase class I and II VVMO6_03155 PF00392 Bacterial regulatory proteins, gntR family VVMO6_03161 PF12838 4Fe-4S dicluster domain VVMO6_03161 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_03161 PF00384 Molybdopterin oxidoreductase VVMO6_03161 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VVMO6_03161 PF01568 Molydopterin dinucleotide binding domain VVMO6_03163 PF03466 LysR substrate binding domain VVMO6_03163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03164 PF01048 Phosphorylase superfamily VVMO6_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03166 PF01752 Collagenase VVMO6_03166 PF08453 Peptidase family M9 N-terminal VVMO6_03166 PF04151 Bacterial pre-peptidase C-terminal domain VVMO6_03171 PF04973 Nicotinamide mononucleotide transporter VVMO6_03172 PF01048 Phosphorylase superfamily VVMO6_03176 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03176 PF03466 LysR substrate binding domain VVMO6_03179 PF00764 Arginosuccinate synthase VVMO6_03180 PF03466 LysR substrate binding domain VVMO6_03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03181 PF00375 Sodium:dicarboxylate symporter family VVMO6_03187 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03187 PF03466 LysR substrate binding domain VVMO6_03189 PF00881 Nitroreductase family VVMO6_03190 PF05958 tRNA (Uracil-5-)-methyltransferase VVMO6_03191 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VVMO6_03197 PF00155 Aminotransferase class I and II VVMO6_03197 PF00392 Bacterial regulatory proteins, gntR family VVMO6_03199 PF08448 PAS fold VVMO6_03199 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03202 PF04231 Endonuclease I VVMO6_03203 PF00128 Alpha amylase, catalytic domain VVMO6_03203 PF02903 Alpha amylase, N-terminal ig-like domain VVMO6_03203 PF16657 Maltogenic Amylase, C-terminal domain VVMO6_03205 PF00884 Sulfatase VVMO6_03206 PF00884 Sulfatase VVMO6_03206 PF08019 Phosphoethanolamine transferase EptA/EptB VVMO6_03207 PF01219 Prokaryotic diacylglycerol kinase VVMO6_03208 PF00672 HAMP domain VVMO6_03208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03208 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03209 PF00072 Response regulator receiver domain VVMO6_03209 PF00486 Transcriptional regulatory protein, C terminal VVMO6_03211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03211 PF03466 LysR substrate binding domain VVMO6_03212 PF00106 short chain dehydrogenase VVMO6_03213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03213 PF03466 LysR substrate binding domain VVMO6_03217 PF01323 DSBA-like thioredoxin domain VVMO6_03218 PF00282 Pyridoxal-dependent decarboxylase conserved domain VVMO6_03219 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VVMO6_03224 PF01569 PAP2 superfamily VVMO6_03225 PF08543 Phosphomethylpyrimidine kinase VVMO6_03226 PF04013 Putative SAM-dependent RNA methyltransferase VVMO6_03228 PF10928 Protein of unknown function (DUF2810) VVMO6_03230 PF07690 Major Facilitator Superfamily VVMO6_03235 PF13416 Bacterial extracellular solute-binding protein VVMO6_03236 PF00593 TonB dependent receptor VVMO6_03236 PF07715 TonB-dependent Receptor Plug Domain VVMO6_03238 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03238 PF00563 EAL domain VVMO6_03238 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03240 PF01906 Putative heavy-metal-binding VVMO6_03241 PF03466 LysR substrate binding domain VVMO6_03241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03243 PF01966 HD domain VVMO6_03247 PF00080 Copper/zinc superoxide dismutase (SODC) VVMO6_03249 PF06628 Catalase-related immune-responsive VVMO6_03249 PF00199 Catalase VVMO6_03252 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VVMO6_03253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03253 PF03466 LysR substrate binding domain VVMO6_03254 PF07690 Major Facilitator Superfamily VVMO6_03257 PF00657 GDSL-like Lipase/Acylhydrolase VVMO6_03258 PF00155 Aminotransferase class I and II VVMO6_03259 PF00107 Zinc-binding dehydrogenase VVMO6_03259 PF08240 Alcohol dehydrogenase GroES-like domain VVMO6_03271 PF08212 Lipocalin-like domain VVMO6_03277 PF03466 LysR substrate binding domain VVMO6_03277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03279 PF01593 Flavin containing amine oxidoreductase VVMO6_03281 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03281 PF00072 Response regulator receiver domain VVMO6_03282 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03282 PF00563 EAL domain VVMO6_03282 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03283 PF00072 Response regulator receiver domain VVMO6_03283 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03284 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03284 PF00563 EAL domain VVMO6_03284 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03285 PF00072 Response regulator receiver domain VVMO6_03285 PF09456 RcsC Alpha-Beta-Loop (ABL) VVMO6_03285 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03286 PF04076 Bacterial OB fold (BOF) protein VVMO6_03288 PF00005 ABC transporter VVMO6_03288 PF00664 ABC transporter transmembrane region VVMO6_03288 PF03412 Peptidase C39 family VVMO6_03289 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_03290 PF02321 Outer membrane efflux protein VVMO6_03292 PF12849 PBP superfamily domain VVMO6_03293 PF00194 Eukaryotic-type carbonic anhydrase VVMO6_03294 PF00924 Mechanosensitive ion channel VVMO6_03296 PF00672 HAMP domain VVMO6_03296 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03297 PF07238 PilZ domain VVMO6_03297 PF12945 Flagellar protein YcgR VVMO6_03299 PF13302 Acetyltransferase (GNAT) domain VVMO6_03300 PF03572 Peptidase family S41 VVMO6_03300 PF07676 WD40-like Beta Propeller Repeat VVMO6_03300 PF14684 Tricorn protease C1 domain VVMO6_03300 PF14685 Tricorn protease PDZ domain VVMO6_03303 PF12558 ATP-binding cassette cobalt transporter VVMO6_03303 PF00005 ABC transporter VVMO6_03304 PF07155 ECF-type riboflavin transporter, S component VVMO6_03305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_03305 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_03306 PF11742 Protein of unknown function (DUF3302) VVMO6_03307 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03310 PF01048 Phosphorylase superfamily VVMO6_03311 PF08349 Protein of unknown function (DUF1722) VVMO6_03312 PF13411 MerR HTH family regulatory protein VVMO6_03313 PF00875 DNA photolyase VVMO6_03313 PF03441 FAD binding domain of DNA photolyase VVMO6_03314 PF03734 L,D-transpeptidase catalytic domain VVMO6_03314 PF01476 LysM domain VVMO6_03314 PF17969 L,D-transpeptidase C-terminal domain VVMO6_03316 PF00271 Helicase conserved C-terminal domain VVMO6_03316 PF00270 DEAD/DEAH box helicase VVMO6_03317 PF00326 Prolyl oligopeptidase family VVMO6_03317 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VVMO6_03318 PF07715 TonB-dependent Receptor Plug Domain VVMO6_03318 PF00593 TonB dependent receptor VVMO6_03322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03322 PF02743 Cache domain VVMO6_03322 PF00672 HAMP domain VVMO6_03324 PF12729 Four helix bundle sensory module for signal transduction VVMO6_03324 PF00672 HAMP domain VVMO6_03324 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03325 PF12849 PBP superfamily domain VVMO6_03326 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03327 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03328 PF00005 ABC transporter VVMO6_03329 PF00360 Phytochrome region VVMO6_03329 PF00563 EAL domain VVMO6_03329 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03329 PF01590 GAF domain VVMO6_03331 PF00092 von Willebrand factor type A domain VVMO6_03331 PF07584 Aerotolerance regulator N-terminal VVMO6_03334 PF01882 Protein of unknown function DUF58 VVMO6_03335 PF17863 AAA lid domain VVMO6_03335 PF07726 ATPase family associated with various cellular activities (AAA) VVMO6_03336 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03336 PF02743 Cache domain VVMO6_03336 PF00672 HAMP domain VVMO6_03338 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03339 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03341 PF00664 ABC transporter transmembrane region VVMO6_03341 PF00005 ABC transporter VVMO6_03342 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_03345 PF00534 Glycosyl transferases group 1 VVMO6_03345 PF13439 Glycosyltransferase Family 4 VVMO6_03347 PF13439 Glycosyltransferase Family 4 VVMO6_03347 PF00534 Glycosyl transferases group 1 VVMO6_03348 PF13807 G-rich domain on putative tyrosine kinase VVMO6_03348 PF13614 AAA domain VVMO6_03348 PF02706 Chain length determinant protein VVMO6_03349 PF02563 Polysaccharide biosynthesis/export protein VVMO6_03349 PF10531 SLBB domain VVMO6_03351 PF02397 Bacterial sugar transferase VVMO6_03352 PF08402 TOBE domain VVMO6_03352 PF00005 ABC transporter VVMO6_03354 PF01547 Bacterial extracellular solute-binding protein VVMO6_03355 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03355 PF14785 Maltose transport system permease protein MalF P2 domain VVMO6_03356 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03362 PF05661 Protein of unknown function (DUF808) VVMO6_03363 PF17151 Periplasmic sensor domain VVMO6_03363 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03364 PF01979 Amidohydrolase family VVMO6_03365 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_03365 PF03473 MOSC domain VVMO6_03365 PF03476 MOSC N-terminal beta barrel domain VVMO6_03365 PF03473 MOSC domain VVMO6_03365 PF03476 MOSC N-terminal beta barrel domain VVMO6_03365 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_03366 PF02540 NAD synthase VVMO6_03375 PF00005 ABC transporter VVMO6_03376 PF01032 FecCD transport family VVMO6_03378 PF02472 Biopolymer transport protein ExbD/TolR VVMO6_03379 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_03380 PF03544 Gram-negative bacterial TonB protein C-terminal VVMO6_03382 PF04055 Radical SAM superfamily VVMO6_03383 PF06228 Haem utilisation ChuX/HutX VVMO6_03384 PF01243 Pyridoxamine 5'-phosphate oxidase VVMO6_03386 PF01584 CheW-like domain VVMO6_03386 PF00072 Response regulator receiver domain VVMO6_03388 PF00582 Universal stress protein family VVMO6_03389 PF00128 Alpha amylase, catalytic domain VVMO6_03390 PF00672 HAMP domain VVMO6_03390 PF02743 Cache domain VVMO6_03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03392 PF02743 Cache domain VVMO6_03392 PF00672 HAMP domain VVMO6_03392 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03399 PF01476 LysM domain VVMO6_03399 PF08525 Opacity-associated protein A N-terminal motif VVMO6_03399 PF01551 Peptidase family M23 VVMO6_03400 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03403 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VVMO6_03403 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VVMO6_03408 PF07670 Nucleoside recognition VVMO6_03408 PF07662 Na+ dependent nucleoside transporter C-terminus VVMO6_03408 PF01773 Na+ dependent nucleoside transporter N-terminus VVMO6_03411 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03411 PF00563 EAL domain VVMO6_03411 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03412 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03412 PF00672 HAMP domain VVMO6_03412 PF12729 Four helix bundle sensory module for signal transduction VVMO6_03415 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03416 PF01625 Peptide methionine sulfoxide reductase VVMO6_03416 PF01641 SelR domain VVMO6_03417 PF02566 OsmC-like protein VVMO6_03418 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VVMO6_03418 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_03418 PF14602 Hexapeptide repeat of succinyl-transferase VVMO6_03421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03421 PF03466 LysR substrate binding domain VVMO6_03422 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03425 PF00672 HAMP domain VVMO6_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03427 PF00155 Aminotransferase class I and II VVMO6_03428 PF12833 Helix-turn-helix domain VVMO6_03428 PF01497 Periplasmic binding protein VVMO6_03429 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03431 PF00266 Aminotransferase class-V VVMO6_03434 PF00005 ABC transporter VVMO6_03435 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03436 PF00392 Bacterial regulatory proteins, gntR family VVMO6_03436 PF07702 UTRA domain VVMO6_03438 PF01266 FAD dependent oxidoreductase VVMO6_03439 PF03466 LysR substrate binding domain VVMO6_03439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03441 PF00854 POT family VVMO6_03443 PF03315 Serine dehydratase beta chain VVMO6_03443 PF03313 Serine dehydratase alpha chain VVMO6_03447 PF00768 D-alanyl-D-alanine carboxypeptidase VVMO6_03447 PF07943 Penicillin-binding protein 5, C-terminal domain VVMO6_03452 PF00440 Bacterial regulatory proteins, tetR family VVMO6_03452 PF13977 BetI-type transcriptional repressor, C-terminal VVMO6_03453 PF00171 Aldehyde dehydrogenase family VVMO6_03454 PF00732 GMC oxidoreductase VVMO6_03454 PF05199 GMC oxidoreductase VVMO6_03455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VVMO6_03456 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03457 PF00571 CBS domain VVMO6_03457 PF00005 ABC transporter VVMO6_03458 PF04224 Protein of unknown function, DUF417 VVMO6_03459 PF02896 PEP-utilising enzyme, TIM barrel domain VVMO6_03459 PF00391 PEP-utilising enzyme, mobile domain VVMO6_03459 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VVMO6_03460 PF03618 Kinase/pyrophosphorylase VVMO6_03464 PF04324 BFD-like [2Fe-2S] binding domain VVMO6_03464 PF01266 FAD dependent oxidoreductase VVMO6_03465 PF00890 FAD binding domain VVMO6_03466 PF13183 4Fe-4S dicluster domain VVMO6_03466 PF02754 Cysteine-rich domain VVMO6_03467 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03469 PF17676 LD-carboxypeptidase C-terminal domain VVMO6_03469 PF02016 LD-carboxypeptidase N-terminal domain VVMO6_03470 PF07995 Glucose / Sorbosone dehydrogenase VVMO6_03472 PF00465 Iron-containing alcohol dehydrogenase VVMO6_03473 PF00012 Hsp70 protein VVMO6_03475 PF00581 Rhodanese-like domain VVMO6_03480 PF13533 Biotin-lipoyl like VVMO6_03481 PF00873 AcrB/AcrD/AcrF family VVMO6_03482 PF13194 Domain of unknown function (DUF4010) VVMO6_03483 PF02868 Thermolysin metallopeptidase, alpha-helical domain VVMO6_03483 PF03413 Peptidase propeptide and YPEB domain VVMO6_03483 PF01447 Thermolysin metallopeptidase, catalytic domain VVMO6_03483 PF07504 Fungalysin/Thermolysin Propeptide Motif VVMO6_03488 PF03222 Tryptophan/tyrosine permease family VVMO6_03490 PF00149 Calcineurin-like phosphoesterase VVMO6_03492 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03492 PF00672 HAMP domain VVMO6_03492 PF02743 Cache domain VVMO6_03494 PF18416 N-acetylglucosamine binding protein domain 2 VVMO6_03494 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VVMO6_03495 PF00892 EamA-like transporter family VVMO6_03498 PF01569 PAP2 superfamily VVMO6_03500 PF03606 C4-dicarboxylate anaerobic carrier VVMO6_03501 PF00171 Aldehyde dehydrogenase family VVMO6_03502 PF00034 Cytochrome c VVMO6_03503 PF01212 Beta-eliminating lyase VVMO6_03505 PF17868 AAA lid domain VVMO6_03505 PF12592 Protein of unknown function (DUF3763) VVMO6_03505 PF07728 AAA domain (dynein-related subfamily) VVMO6_03506 PF05762 VWA domain containing CoxE-like protein VVMO6_03507 PF04237 YjbR VVMO6_03510 PF05025 RbsD / FucU transport protein family VVMO6_03511 PF00005 ABC transporter VVMO6_03512 PF02653 Branched-chain amino acid transport system / permease component VVMO6_03513 PF13407 Periplasmic binding protein domain VVMO6_03514 PF00294 pfkB family carbohydrate kinase VVMO6_03515 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03517 PF01584 CheW-like domain VVMO6_03517 PF00072 Response regulator receiver domain VVMO6_03519 PF00583 Acetyltransferase (GNAT) family VVMO6_03520 PF01926 50S ribosome-binding GTPase VVMO6_03521 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03521 PF00672 HAMP domain VVMO6_03521 PF12729 Four helix bundle sensory module for signal transduction VVMO6_03522 PF01740 STAS domain VVMO6_03522 PF08678 Rsbr N terminal VVMO6_03524 PF13581 Histidine kinase-like ATPase domain VVMO6_03526 PF00672 HAMP domain VVMO6_03526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03526 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03526 PF01627 Hpt domain VVMO6_03526 PF00072 Response regulator receiver domain VVMO6_03526 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_03527 PF00072 Response regulator receiver domain VVMO6_03528 PF12320 Type 5 capsule protein repressor C-terminal domain VVMO6_03528 PF00149 Calcineurin-like phosphoesterase VVMO6_03530 PF13476 AAA domain VVMO6_03532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03532 PF03466 LysR substrate binding domain VVMO6_03536 PF00263 Bacterial type II and III secretion system protein VVMO6_03536 PF04972 BON domain VVMO6_03536 PF13629 Pilus formation protein N terminal region VVMO6_03539 PF00437 Type II/IV secretion system protein VVMO6_03555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VVMO6_03555 PF02811 PHP domain VVMO6_03555 PF07733 Bacterial DNA polymerase III alpha NTPase domain VVMO6_03555 PF14579 Helix-hairpin-helix motif VVMO6_03555 PF00929 Exonuclease VVMO6_03564 PF02511 Thymidylate synthase complementing protein VVMO6_03565 PF04055 Radical SAM superfamily VVMO6_03567 PF03477 ATP cone domain VVMO6_03567 PF13597 Anaerobic ribonucleoside-triphosphate reductase VVMO6_03595 PF02899 Phage integrase, N-terminal SAM-like domain VVMO6_03595 PF00589 Phage integrase family VVMO6_03598 PF00939 Sodium:sulfate symporter transmembrane region VVMO6_03600 PF17203 Single cache domain 3 VVMO6_03600 PF00989 PAS fold VVMO6_03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03600 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VVMO6_03601 PF00072 Response regulator receiver domain VVMO6_03601 PF12431 Transcriptional regulator VVMO6_03602 PF12464 Maltose acetyltransferase VVMO6_03602 PF00132 Bacterial transferase hexapeptide (six repeats) VVMO6_03607 PF01032 FecCD transport family VVMO6_03608 PF01032 FecCD transport family VVMO6_03609 PF00005 ABC transporter VVMO6_03611 PF13411 MerR HTH family regulatory protein VVMO6_03617 PF12805 FUSC-like inner membrane protein yccS VVMO6_03618 PF13361 UvrD-like helicase C-terminal domain VVMO6_03618 PF00580 UvrD/REP helicase N-terminal domain VVMO6_03618 PF12462 DNA helicase IV / RNA helicase N terminal VVMO6_03619 PF02142 MGS-like domain VVMO6_03620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VVMO6_03621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03621 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03621 PF00672 HAMP domain VVMO6_03621 PF00072 Response regulator receiver domain VVMO6_03621 PF01627 Hpt domain VVMO6_03626 PF03781 Sulfatase-modifying factor enzyme 1 VVMO6_03627 PF03264 NapC/NirT cytochrome c family, N-terminal region VVMO6_03630 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VVMO6_03631 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB VVMO6_03633 PF00271 Helicase conserved C-terminal domain VVMO6_03633 PF00270 DEAD/DEAH box helicase VVMO6_03633 PF03880 DbpA RNA binding domain VVMO6_03634 PF09456 RcsC Alpha-Beta-Loop (ABL) VVMO6_03634 PF00072 Response regulator receiver domain VVMO6_03634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03634 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03635 PF00498 FHA domain VVMO6_03635 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03635 PF00563 EAL domain VVMO6_03638 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03638 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03638 PF00563 EAL domain VVMO6_03640 PF12849 PBP superfamily domain VVMO6_03642 PF12833 Helix-turn-helix domain VVMO6_03643 PF08206 Ribonuclease B OB domain VVMO6_03643 PF00773 RNB domain VVMO6_03643 PF00575 S1 RNA binding domain VVMO6_03644 PF00271 Helicase conserved C-terminal domain VVMO6_03644 PF00270 DEAD/DEAH box helicase VVMO6_03644 PF03880 DbpA RNA binding domain VVMO6_03645 PF00871 Acetokinase family VVMO6_03646 PF00884 Sulfatase VVMO6_03647 PF03466 LysR substrate binding domain VVMO6_03647 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03648 PF00884 Sulfatase VVMO6_03649 PF13186 Iron-sulfur cluster-binding domain VVMO6_03649 PF04055 Radical SAM superfamily VVMO6_03651 PF17863 AAA lid domain VVMO6_03651 PF07726 ATPase family associated with various cellular activities (AAA) VVMO6_03654 PF00092 von Willebrand factor type A domain VVMO6_03657 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03657 PF03466 LysR substrate binding domain VVMO6_03658 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase VVMO6_03659 PF03781 Sulfatase-modifying factor enzyme 1 VVMO6_03660 PF13186 Iron-sulfur cluster-binding domain VVMO6_03660 PF04055 Radical SAM superfamily VVMO6_03662 PF18081 Fanconi anemia-associated nuclease SAP domain VVMO6_03662 PF08774 VRR-NUC domain VVMO6_03666 PF07690 Major Facilitator Superfamily VVMO6_03667 PF13533 Biotin-lipoyl like VVMO6_03670 PF03466 LysR substrate binding domain VVMO6_03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03671 PF02627 Carboxymuconolactone decarboxylase family VVMO6_03675 PF00795 Carbon-nitrogen hydrolase VVMO6_03677 PF00005 ABC transporter VVMO6_03677 PF00664 ABC transporter transmembrane region VVMO6_03685 PF02347 Glycine cleavage system P-protein VVMO6_03686 PF01597 Glycine cleavage H-protein VVMO6_03687 PF00464 Serine hydroxymethyltransferase VVMO6_03690 PF01571 Aminomethyltransferase folate-binding domain VVMO6_03690 PF08669 Glycine cleavage T-protein C-terminal barrel domain VVMO6_03695 PF00873 AcrB/AcrD/AcrF family VVMO6_03697 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VVMO6_03697 PF02378 Phosphotransferase system, EIIC VVMO6_03698 PF00294 pfkB family carbohydrate kinase VVMO6_03699 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_03699 PF00381 PTS HPr component phosphorylation site VVMO6_03701 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VVMO6_03701 PF00356 Bacterial regulatory proteins, lacI family VVMO6_03706 PF02887 Pyruvate kinase, alpha/beta domain VVMO6_03706 PF00224 Pyruvate kinase, barrel domain VVMO6_03707 PF07690 Major Facilitator Superfamily VVMO6_03709 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03709 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03709 PF02743 Cache domain VVMO6_03710 PF02954 Bacterial regulatory protein, Fis family VVMO6_03710 PF00072 Response regulator receiver domain VVMO6_03710 PF14532 Sigma-54 interaction domain VVMO6_03711 PF00465 Iron-containing alcohol dehydrogenase VVMO6_03712 PF12833 Helix-turn-helix domain VVMO6_03712 PF06719 AraC-type transcriptional regulator N-terminus VVMO6_03713 PF06483 Chitinase C VVMO6_03713 PF00704 Glycosyl hydrolases family 18 VVMO6_03714 PF00483 Nucleotidyl transferase VVMO6_03715 PF01268 Formate--tetrahydrofolate ligase VVMO6_03716 PF00294 pfkB family carbohydrate kinase VVMO6_03719 PF11849 Domain of unknown function (DUF3369) VVMO6_03720 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03721 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03723 PF04336 Acyl carrier protein phosphodiesterase VVMO6_03724 PF00271 Helicase conserved C-terminal domain VVMO6_03724 PF00270 DEAD/DEAH box helicase VVMO6_03727 PF01292 Prokaryotic cytochrome b561 VVMO6_03728 PF04264 YceI-like domain VVMO6_03729 PF01226 Formate/nitrite transporter VVMO6_03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03730 PF03466 LysR substrate binding domain VVMO6_03731 PF06496 Protein of unknown function (DUF1097) VVMO6_03732 PF11398 Protein of unknown function (DUF2813) VVMO6_03733 PF00149 Calcineurin-like phosphoesterase VVMO6_03733 PF02872 5'-nucleotidase, C-terminal domain VVMO6_03734 PF03741 Integral membrane protein TerC family VVMO6_03736 PF00892 EamA-like transporter family VVMO6_03737 PF00491 Arginase family VVMO6_03740 PF12262 Bacterial virulence factor lipase N-terminal VVMO6_03741 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VVMO6_03744 PF03061 Thioesterase superfamily VVMO6_03746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_03746 PF12793 Sugar transport-related sRNA regulator N-term VVMO6_03748 PF16657 Maltogenic Amylase, C-terminal domain VVMO6_03748 PF00128 Alpha amylase, catalytic domain VVMO6_03749 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03749 PF03466 LysR substrate binding domain VVMO6_03753 PF01556 DnaJ C terminal domain VVMO6_03753 PF00684 DnaJ central domain VVMO6_03753 PF00226 DnaJ domain VVMO6_03757 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03757 PF00498 FHA domain VVMO6_03757 PF00563 EAL domain VVMO6_03758 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VVMO6_03758 PF12241 Trans-2-enoyl-CoA reductase catalytic region VVMO6_03758 PF07055 Enoyl reductase FAD binding domain VVMO6_03759 PF13472 GDSL-like Lipase/Acylhydrolase family VVMO6_03760 PF00005 ABC transporter VVMO6_03762 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VVMO6_03762 PF01266 FAD dependent oxidoreductase VVMO6_03763 PF02626 Carboxyltransferase domain, subdomain A and B VVMO6_03764 PF02682 Carboxyltransferase domain, subdomain C and D VVMO6_03765 PF03746 LamB/YcsF family VVMO6_03767 PF00563 EAL domain VVMO6_03767 PF08448 PAS fold VVMO6_03767 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03767 PF13426 PAS domain VVMO6_03767 PF08447 PAS fold VVMO6_03767 PF05231 MASE1 VVMO6_03768 PF07715 TonB-dependent Receptor Plug Domain VVMO6_03768 PF00593 TonB dependent receptor VVMO6_03769 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03769 PF03466 LysR substrate binding domain VVMO6_03770 PF13607 Succinyl-CoA ligase like flavodoxin domain VVMO6_03770 PF00583 Acetyltransferase (GNAT) family VVMO6_03770 PF13380 CoA binding domain VVMO6_03771 PF05036 Sporulation related domain VVMO6_03772 PF07478 D-ala D-ala ligase C-terminus VVMO6_03772 PF01820 D-ala D-ala ligase N-terminus VVMO6_03774 PF01253 Translation initiation factor SUI1 VVMO6_03791 PF03701 Uncharacterised protein family (UPF0181) VVMO6_03794 PF00486 Transcriptional regulatory protein, C terminal VVMO6_03794 PF00072 Response regulator receiver domain VVMO6_03796 PF02233 NAD(P) transhydrogenase beta subunit VVMO6_03797 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VVMO6_03797 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VVMO6_03797 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VVMO6_03800 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03802 PF00486 Transcriptional regulatory protein, C terminal VVMO6_03802 PF00072 Response regulator receiver domain VVMO6_03804 PF01047 MarR family VVMO6_03805 PF00892 EamA-like transporter family VVMO6_03806 PF03459 TOBE domain VVMO6_03806 PF00005 ABC transporter VVMO6_03807 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03809 PF07685 CobB/CobQ-like glutamine amidotransferase domain VVMO6_03809 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VVMO6_03812 PF18030 RimK PreATP-grasp domain VVMO6_03812 PF08443 RimK-like ATP-grasp domain VVMO6_03813 PF00155 Aminotransferase class I and II VVMO6_03814 PF00672 HAMP domain VVMO6_03814 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03814 PF12729 Four helix bundle sensory module for signal transduction VVMO6_03816 PF03477 ATP cone domain VVMO6_03816 PF13597 Anaerobic ribonucleoside-triphosphate reductase VVMO6_03818 PF00873 AcrB/AcrD/AcrF family VVMO6_03821 PF04143 Sulphur transport VVMO6_03824 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_03824 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VVMO6_03827 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VVMO6_03827 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VVMO6_03828 PF00085 Thioredoxin VVMO6_03829 PF07690 Major Facilitator Superfamily VVMO6_03830 PF12833 Helix-turn-helix domain VVMO6_03831 PF01554 MatE VVMO6_03832 PF11756 Nitrous oxide-stimulated promoter VVMO6_03834 PF17200 Single Cache domain 2 VVMO6_03834 PF00672 HAMP domain VVMO6_03834 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03835 PF03605 Anaerobic c4-dicarboxylate membrane transporter VVMO6_03838 PF02472 Biopolymer transport protein ExbD/TolR VVMO6_03839 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_03840 PF01618 MotA/TolQ/ExbB proton channel family VVMO6_03844 PF10414 Sirohaem synthase dimerisation region VVMO6_03844 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VVMO6_03844 PF14824 Sirohaem biosynthesis protein central VVMO6_03846 PF13806 Rieske-like [2Fe-2S] domain VVMO6_03847 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VVMO6_03847 PF04324 BFD-like [2Fe-2S] binding domain VVMO6_03847 PF18267 Rubredoxin NAD+ reductase C-terminal domain VVMO6_03847 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_03847 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VVMO6_03848 PF17200 Single Cache domain 2 VVMO6_03848 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03848 PF00672 HAMP domain VVMO6_03853 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03853 PF01627 Hpt domain VVMO6_03853 PF00072 Response regulator receiver domain VVMO6_03853 PF00672 HAMP domain VVMO6_03853 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_03854 PF03705 CheR methyltransferase, all-alpha domain VVMO6_03854 PF01739 CheR methyltransferase, SAM binding domain VVMO6_03855 PF01339 CheB methylesterase VVMO6_03856 PF01590 GAF domain VVMO6_03856 PF00563 EAL domain VVMO6_03856 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03856 PF00360 Phytochrome region VVMO6_03858 PF00491 Arginase family VVMO6_03859 PF00270 DEAD/DEAH box helicase VVMO6_03859 PF00271 Helicase conserved C-terminal domain VVMO6_03861 PF07683 Cobalamin synthesis protein cobW C-terminal domain VVMO6_03861 PF02492 CobW/HypB/UreG, nucleotide-binding domain VVMO6_03863 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03866 PF04324 BFD-like [2Fe-2S] binding domain VVMO6_03866 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VVMO6_03866 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VVMO6_03866 PF13806 Rieske-like [2Fe-2S] domain VVMO6_03866 PF18267 Rubredoxin NAD+ reductase C-terminal domain VVMO6_03866 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_03867 PF00005 ABC transporter VVMO6_03868 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_03869 PF00005 ABC transporter VVMO6_03870 PF03861 ANTAR domain VVMO6_03870 PF08376 Nitrate and nitrite sensing VVMO6_03871 PF01738 Dienelactone hydrolase family VVMO6_03872 PF00591 Glycosyl transferase family, a/b domain VVMO6_03872 PF02885 Glycosyl transferase family, helical bundle domain VVMO6_03873 PF10414 Sirohaem synthase dimerisation region VVMO6_03873 PF14824 Sirohaem biosynthesis protein central VVMO6_03873 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VVMO6_03874 PF04324 BFD-like [2Fe-2S] binding domain VVMO6_03874 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_03874 PF00384 Molybdopterin oxidoreductase VVMO6_03874 PF01568 Molydopterin dinucleotide binding domain VVMO6_03876 PF00583 Acetyltransferase (GNAT) family VVMO6_03877 PF00128 Alpha amylase, catalytic domain VVMO6_03878 PF00672 HAMP domain VVMO6_03878 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03879 PF00672 HAMP domain VVMO6_03879 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03881 PF00652 Ricin-type beta-trefoil lectin domain VVMO6_03881 PF07968 Leukocidin/Hemolysin toxin family VVMO6_03882 PF07690 Major Facilitator Superfamily VVMO6_03883 PF03009 Glycerophosphoryl diester phosphodiesterase family VVMO6_03884 PF01523 Putative modulator of DNA gyrase VVMO6_03885 PF01523 Putative modulator of DNA gyrase VVMO6_03886 PF08334 Type II secretion system (T2SS), protein G VVMO6_03886 PF07963 Prokaryotic N-terminal methylation motif VVMO6_03887 PF03606 C4-dicarboxylate anaerobic carrier VVMO6_03888 PF04011 LemA family VVMO6_03889 PF01435 Peptidase family M48 VVMO6_03892 PF03527 RHS protein VVMO6_03893 PF13737 Transposase DDE domain VVMO6_03894 PF13737 Transposase DDE domain VVMO6_03896 PF03527 RHS protein VVMO6_03898 PF04717 Type VI secretion system, phage-baseplate injector VVMO6_03900 PF00004 ATPase family associated with various cellular activities (AAA) VVMO6_03900 PF07724 AAA domain (Cdc48 subfamily) VVMO6_03900 PF17871 AAA lid domain VVMO6_03900 PF10431 C-terminal, D2-small domain, of ClpB protein VVMO6_03912 PF13677 Membrane MotB of proton-channel complex MotA/MotB VVMO6_03912 PF00691 OmpA family VVMO6_03916 PF00069 Protein kinase domain VVMO6_03916 PF03793 PASTA domain VVMO6_03920 PF12843 Putative quorum-sensing-regulated virulence factor VVMO6_03923 PF00563 EAL domain VVMO6_03923 PF03707 Bacterial signalling protein N terminal repeat VVMO6_03923 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03924 PF01329 Pterin 4 alpha carbinolamine dehydratase VVMO6_03925 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VVMO6_03926 PF00501 AMP-binding enzyme VVMO6_03926 PF13193 AMP-binding enzyme C-terminal domain VVMO6_03928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_03928 PF03466 LysR substrate binding domain VVMO6_03930 PF00892 EamA-like transporter family VVMO6_03934 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_03934 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_03934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03935 PF11849 Domain of unknown function (DUF3369) VVMO6_03937 PF00962 Adenosine/AMP deaminase VVMO6_03938 PF00676 Dehydrogenase E1 component VVMO6_03939 PF02780 Transketolase, C-terminal domain VVMO6_03939 PF02779 Transketolase, pyrimidine binding domain VVMO6_03940 PF02817 e3 binding domain VVMO6_03940 PF00364 Biotin-requiring enzyme VVMO6_03940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VVMO6_03941 PF00766 Electron transfer flavoprotein FAD-binding domain VVMO6_03941 PF01012 Electron transfer flavoprotein domain VVMO6_03942 PF01012 Electron transfer flavoprotein domain VVMO6_03945 PF00672 HAMP domain VVMO6_03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03946 PF01168 Alanine racemase, N-terminal domain VVMO6_03946 PF00842 Alanine racemase, C-terminal domain VVMO6_03947 PF11713 Peptidase C80 family VVMO6_03947 PF11647 Membrane Localization Domain VVMO6_03947 PF12146 Serine aminopeptidase, S33 VVMO6_03947 PF16671 Actin cross-linking domain VVMO6_03947 PF07634 RtxA repeat VVMO6_03948 PF02794 RTX toxin acyltransferase family VVMO6_03950 PF03412 Peptidase C39 family VVMO6_03950 PF00005 ABC transporter VVMO6_03950 PF00664 ABC transporter transmembrane region VVMO6_03952 PF00005 ABC transporter VVMO6_03952 PF00664 ABC transporter transmembrane region VVMO6_03952 PF03412 Peptidase C39 family VVMO6_03954 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VVMO6_03954 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VVMO6_03955 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_03956 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_03957 PF02770 Acyl-CoA dehydrogenase, middle domain VVMO6_03957 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VVMO6_03957 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VVMO6_03958 PF00171 Aldehyde dehydrogenase family VVMO6_03959 PF00108 Thiolase, N-terminal domain VVMO6_03959 PF02803 Thiolase, C-terminal domain VVMO6_03960 PF00376 MerR family regulatory protein VVMO6_03960 PF09278 MerR, DNA binding VVMO6_03961 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VVMO6_03961 PF02770 Acyl-CoA dehydrogenase, middle domain VVMO6_03961 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VVMO6_03962 PF01039 Carboxyl transferase domain VVMO6_03963 PF00378 Enoyl-CoA hydratase/isomerase VVMO6_03964 PF00682 HMGL-like VVMO6_03966 PF00578 AhpC/TSA family VVMO6_03966 PF10417 C-terminal domain of 1-Cys peroxiredoxin VVMO6_03967 PF07992 Pyridine nucleotide-disulphide oxidoreductase VVMO6_03967 PF13192 Thioredoxin domain VVMO6_03968 PF00313 'Cold-shock' DNA-binding domain VVMO6_03970 PF01699 Sodium/calcium exchanger protein VVMO6_03971 PF00440 Bacterial regulatory proteins, tetR family VVMO6_03971 PF16925 Tetracyclin repressor-like, C-terminal domain VVMO6_03972 PF00107 Zinc-binding dehydrogenase VVMO6_03972 PF16884 N-terminal domain of oxidoreductase VVMO6_03975 PF07690 Major Facilitator Superfamily VVMO6_03976 PF00072 Response regulator receiver domain VVMO6_03976 PF00196 Bacterial regulatory proteins, luxR family VVMO6_03977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_03977 PF05231 MASE1 VVMO6_03977 PF07730 Histidine kinase VVMO6_03978 PF07690 Major Facilitator Superfamily VVMO6_03979 PF01238 Phosphomannose isomerase type I VVMO6_03981 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_03983 PF03889 Alternative ribosome-rescue factor A VVMO6_03984 PF00313 'Cold-shock' DNA-binding domain VVMO6_03990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VVMO6_03990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VVMO6_03991 PF13419 Haloacid dehalogenase-like hydrolase VVMO6_03992 PF00672 HAMP domain VVMO6_03992 PF12729 Four helix bundle sensory module for signal transduction VVMO6_03992 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_03993 PF00873 AcrB/AcrD/AcrF family VVMO6_03994 PF13533 Biotin-lipoyl like VVMO6_03995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VVMO6_03996 PF01546 Peptidase family M20/M25/M40 VVMO6_03996 PF07687 Peptidase dimerisation domain VVMO6_03998 PF00248 Aldo/keto reductase family VVMO6_04002 PF00654 Voltage gated chloride channel VVMO6_04004 PF01566 Natural resistance-associated macrophage protein VVMO6_04005 PF01227 GTP cyclohydrolase I VVMO6_04006 PF00994 Probable molybdopterin binding domain VVMO6_04006 PF03454 MoeA C-terminal region (domain IV) VVMO6_04006 PF03453 MoeA N-terminal region (domain I and II) VVMO6_04007 PF00899 ThiF family VVMO6_04009 PF00581 Rhodanese-like domain VVMO6_04010 PF03707 Bacterial signalling protein N terminal repeat VVMO6_04010 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04010 PF00563 EAL domain VVMO6_04011 PF08329 Chitinase A, N-terminal domain VVMO6_04011 PF00704 Glycosyl hydrolases family 18 VVMO6_04013 PF00923 Transaldolase/Fructose-6-phosphate aldolase VVMO6_04014 PF02779 Transketolase, pyrimidine binding domain VVMO6_04014 PF00456 Transketolase, thiamine diphosphate binding domain VVMO6_04014 PF02780 Transketolase, C-terminal domain VVMO6_04015 PF03707 Bacterial signalling protein N terminal repeat VVMO6_04015 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04015 PF00563 EAL domain VVMO6_04016 PF08447 PAS fold VVMO6_04016 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04017 PF00793 DAHP synthetase I family VVMO6_04018 PF00691 OmpA family VVMO6_04018 PF13488 Glycine zipper VVMO6_04019 PF01040 UbiA prenyltransferase family VVMO6_04020 PF02628 Cytochrome oxidase assembly protein VVMO6_04024 PF00510 Cytochrome c oxidase subunit III VVMO6_04025 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VVMO6_04026 PF00115 Cytochrome C and Quinol oxidase polypeptide I VVMO6_04027 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VVMO6_04027 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VVMO6_04028 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VVMO6_04028 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VVMO6_04028 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VVMO6_04028 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VVMO6_04030 PF01810 LysE type translocator VVMO6_04034 PF01557 Fumarylacetoacetate (FAA) hydrolase family VVMO6_04035 PF01047 MarR family VVMO6_04036 PF02566 OsmC-like protein VVMO6_04038 PF00578 AhpC/TSA family VVMO6_04040 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04040 PF00563 EAL domain VVMO6_04040 PF03707 Bacterial signalling protein N terminal repeat VVMO6_04041 PF00892 EamA-like transporter family VVMO6_04042 PF00462 Glutaredoxin VVMO6_04045 PF07690 Major Facilitator Superfamily VVMO6_04046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04046 PF03466 LysR substrate binding domain VVMO6_04047 PF00360 Phytochrome region VVMO6_04047 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04047 PF00563 EAL domain VVMO6_04047 PF01590 GAF domain VVMO6_04048 PF01042 Endoribonuclease L-PSP VVMO6_04050 PF02838 Glycosyl hydrolase family 20, domain 2 VVMO6_04050 PF00728 Glycosyl hydrolase family 20, catalytic domain VVMO6_04051 PF00474 Sodium:solute symporter family VVMO6_04053 PF07969 Amidohydrolase family VVMO6_04055 PF02685 Glucokinase VVMO6_04055 PF01418 Helix-turn-helix domain, rpiR family VVMO6_04055 PF01380 SIS domain VVMO6_04057 PF00005 ABC transporter VVMO6_04059 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VVMO6_04061 PF12706 Beta-lactamase superfamily domain VVMO6_04065 PF01047 MarR family VVMO6_04068 PF00270 DEAD/DEAH box helicase VVMO6_04068 PF00271 Helicase conserved C-terminal domain VVMO6_04072 PF03372 Endonuclease/Exonuclease/phosphatase family VVMO6_04074 PF00583 Acetyltransferase (GNAT) family VVMO6_04075 PF14760 Rnk N-terminus VVMO6_04075 PF01272 Transcription elongation factor, GreA/GreB, C-term VVMO6_04085 PF00478 IMP dehydrogenase / GMP reductase domain VVMO6_04088 PF01256 Carbohydrate kinase VVMO6_04088 PF03853 YjeF-related protein N-terminus VVMO6_04092 PF00196 Bacterial regulatory proteins, luxR family VVMO6_04092 PF00072 Response regulator receiver domain VVMO6_04093 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VVMO6_04093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04093 PF00672 HAMP domain VVMO6_04093 PF07730 Histidine kinase VVMO6_04094 PF12838 4Fe-4S dicluster domain VVMO6_04094 PF13187 4Fe-4S dicluster domain VVMO6_04096 PF01568 Molydopterin dinucleotide binding domain VVMO6_04096 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_04096 PF00384 Molybdopterin oxidoreductase VVMO6_04097 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VVMO6_04098 PF03264 NapC/NirT cytochrome c family, N-terminal region VVMO6_04100 PF07646 Kelch motif VVMO6_04101 PF01344 Kelch motif VVMO6_04102 PF01418 Helix-turn-helix domain, rpiR family VVMO6_04102 PF01380 SIS domain VVMO6_04103 PF00701 Dihydrodipicolinate synthetase family VVMO6_04104 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VVMO6_04105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VVMO6_04106 PF03480 Bacterial extracellular solute-binding protein, family 7 VVMO6_04107 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VVMO6_04108 PF00480 ROK family VVMO6_04109 PF01979 Amidohydrolase family VVMO6_04112 PF00561 alpha/beta hydrolase fold VVMO6_04112 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VVMO6_04114 PF02803 Thiolase, C-terminal domain VVMO6_04114 PF00108 Thiolase, N-terminal domain VVMO6_04115 PF00106 short chain dehydrogenase VVMO6_04116 PF07549 SecD/SecF GG Motif VVMO6_04116 PF02355 Protein export membrane protein VVMO6_04117 PF13721 SecD export protein N-terminal TM region VVMO6_04117 PF07549 SecD/SecF GG Motif VVMO6_04117 PF02355 Protein export membrane protein VVMO6_04121 PF01037 Lrp/AsnC ligand binding domain VVMO6_04124 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04124 PF09308 LuxQ, periplasmic VVMO6_04124 PF00072 Response regulator receiver domain VVMO6_04124 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04125 PF13407 Periplasmic binding protein domain VVMO6_04127 PF01541 GIY-YIG catalytic domain VVMO6_04128 PF04337 Protein of unknown function, DUF480 VVMO6_04130 PF04363 Protein of unknown function (DUF496) VVMO6_04131 PF01554 MatE VVMO6_04132 PF00672 HAMP domain VVMO6_04132 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04132 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_04132 PF01627 Hpt domain VVMO6_04132 PF00072 Response regulator receiver domain VVMO6_04132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VVMO6_04135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_04137 PF03466 LysR substrate binding domain VVMO6_04137 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04139 PF13333 Integrase core domain VVMO6_04139 PF00665 Integrase core domain VVMO6_04139 PF13276 HTH-like domain VVMO6_04141 PF08534 Redoxin VVMO6_04141 PF00462 Glutaredoxin VVMO6_04143 PF03466 LysR substrate binding domain VVMO6_04143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04144 PF01037 Lrp/AsnC ligand binding domain VVMO6_04146 PF13520 Amino acid permease VVMO6_04147 PF13230 Glutamine amidotransferases class-II VVMO6_04148 PF00155 Aminotransferase class I and II VVMO6_04148 PF00392 Bacterial regulatory proteins, gntR family VVMO6_04150 PF00672 HAMP domain VVMO6_04150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04150 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04150 PF16527 Two-component sensor protein CpxA, periplasmic domain VVMO6_04151 PF00486 Transcriptional regulatory protein, C terminal VVMO6_04151 PF00072 Response regulator receiver domain VVMO6_04156 PF00571 CBS domain VVMO6_04156 PF03448 MgtE intracellular N domain VVMO6_04156 PF01769 Divalent cation transporter VVMO6_04157 PF12833 Helix-turn-helix domain VVMO6_04158 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VVMO6_04159 PF07969 Amidohydrolase family VVMO6_04160 PF13654 AAA domain VVMO6_04160 PF05362 Lon protease (S16) C-terminal proteolytic domain VVMO6_04162 PF00005 ABC transporter VVMO6_04162 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_04164 PF00326 Prolyl oligopeptidase family VVMO6_04164 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VVMO6_04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04165 PF03466 LysR substrate binding domain VVMO6_04166 PF02652 L-lactate permease VVMO6_04167 PF02754 Cysteine-rich domain VVMO6_04168 PF13183 4Fe-4S dicluster domain VVMO6_04168 PF02589 LUD domain VVMO6_04168 PF11870 Domain of unknown function (DUF3390) VVMO6_04169 PF02589 LUD domain VVMO6_04173 PF07690 Major Facilitator Superfamily VVMO6_04179 PF08447 PAS fold VVMO6_04179 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04179 PF00563 EAL domain VVMO6_04179 PF08448 PAS fold VVMO6_04183 PF17185 NlpE C-terminal OB domain VVMO6_04183 PF04170 NlpE N-terminal domain VVMO6_04184 PF00005 ABC transporter VVMO6_04185 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_04186 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_04187 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_04190 PF08448 PAS fold VVMO6_04190 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04190 PF00563 EAL domain VVMO6_04191 PF13472 GDSL-like Lipase/Acylhydrolase family VVMO6_04191 PF17996 Carbohydrate esterase 2 N-terminal VVMO6_04193 PF00672 HAMP domain VVMO6_04193 PF12729 Four helix bundle sensory module for signal transduction VVMO6_04193 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04194 PF00497 Bacterial extracellular solute-binding proteins, family 3 VVMO6_04197 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VVMO6_04197 PF01648 4'-phosphopantetheinyl transferase superfamily VVMO6_04198 PF07993 Male sterility protein VVMO6_04198 PF13193 AMP-binding enzyme C-terminal domain VVMO6_04198 PF00550 Phosphopantetheine attachment site VVMO6_04198 PF00501 AMP-binding enzyme VVMO6_04198 PF00668 Condensation domain VVMO6_04199 PF00501 AMP-binding enzyme VVMO6_04199 PF13193 AMP-binding enzyme C-terminal domain VVMO6_04199 PF00668 Condensation domain VVMO6_04199 PF00550 Phosphopantetheine attachment site VVMO6_04199 PF00975 Thioesterase domain VVMO6_04200 PF00793 DAHP synthetase I family VVMO6_04202 PF00425 chorismate binding enzyme VVMO6_04203 PF13193 AMP-binding enzyme C-terminal domain VVMO6_04203 PF00501 AMP-binding enzyme VVMO6_04205 PF04954 Siderophore-interacting protein VVMO6_04205 PF08021 Siderophore-interacting FAD-binding domain VVMO6_04206 PF00550 Phosphopantetheine attachment site VVMO6_04206 PF00857 Isochorismatase family VVMO6_04208 PF00501 AMP-binding enzyme VVMO6_04208 PF13193 AMP-binding enzyme C-terminal domain VVMO6_04210 PF01497 Periplasmic binding protein VVMO6_04211 PF07715 TonB-dependent Receptor Plug Domain VVMO6_04212 PF00975 Thioesterase domain VVMO6_04212 PF00501 AMP-binding enzyme VVMO6_04212 PF13193 AMP-binding enzyme C-terminal domain VVMO6_04212 PF00550 Phosphopantetheine attachment site VVMO6_04212 PF00668 Condensation domain VVMO6_04214 PF08443 RimK-like ATP-grasp domain VVMO6_04214 PF18030 RimK PreATP-grasp domain VVMO6_04215 PF18030 RimK PreATP-grasp domain VVMO6_04215 PF08443 RimK-like ATP-grasp domain VVMO6_04216 PF00753 Metallo-beta-lactamase superfamily VVMO6_04219 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_04220 PF00873 AcrB/AcrD/AcrF family VVMO6_04222 PF01212 Beta-eliminating lyase VVMO6_04223 PF03222 Tryptophan/tyrosine permease family VVMO6_04224 PF00005 ABC transporter VVMO6_04224 PF16326 ABC transporter C-terminal domain VVMO6_04224 PF12848 ABC transporter VVMO6_04226 PF00175 Oxidoreductase NAD-binding domain VVMO6_04226 PF00970 Oxidoreductase FAD-binding domain VVMO6_04226 PF00111 2Fe-2S iron-sulfur cluster binding domain VVMO6_04227 PF00356 Bacterial regulatory proteins, lacI family VVMO6_04228 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_04230 PF03611 PTS system sugar-specific permease component VVMO6_04231 PF01327 Polypeptide deformylase VVMO6_04233 PF00041 Fibronectin type III domain VVMO6_04233 PF12561 ToxR activated gene A lipoprotein domain VVMO6_04235 PF00571 CBS domain VVMO6_04235 PF03471 Transporter associated domain VVMO6_04235 PF01595 Cyclin M transmembrane N-terminal domain VVMO6_04237 PF00171 Aldehyde dehydrogenase family VVMO6_04238 PF01590 GAF domain VVMO6_04238 PF02954 Bacterial regulatory protein, Fis family VVMO6_04238 PF00158 Sigma-54 interaction domain VVMO6_04240 PF03707 Bacterial signalling protein N terminal repeat VVMO6_04240 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04240 PF00563 EAL domain VVMO6_04241 PF13407 Periplasmic binding protein domain VVMO6_04242 PF13417 Glutathione S-transferase, N-terminal domain VVMO6_04242 PF00043 Glutathione S-transferase, C-terminal domain VVMO6_04243 PF03466 LysR substrate binding domain VVMO6_04243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04244 PF02567 Phenazine biosynthesis-like protein VVMO6_04245 PF00072 Response regulator receiver domain VVMO6_04245 PF00196 Bacterial regulatory proteins, luxR family VVMO6_04246 PF00579 tRNA synthetases class I (W and Y) VVMO6_04246 PF01479 S4 domain VVMO6_04247 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VVMO6_04247 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VVMO6_04248 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VVMO6_04250 PF13533 Biotin-lipoyl like VVMO6_04252 PF14863 Alkyl sulfatase dimerisation VVMO6_04252 PF14864 Alkyl sulfatase C-terminal VVMO6_04252 PF00753 Metallo-beta-lactamase superfamily VVMO6_04254 PF03466 LysR substrate binding domain VVMO6_04254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04256 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04256 PF03466 LysR substrate binding domain VVMO6_04257 PF08543 Phosphomethylpyrimidine kinase VVMO6_04260 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04260 PF00563 EAL domain VVMO6_04260 PF01590 GAF domain VVMO6_04260 PF00360 Phytochrome region VVMO6_04262 PF00144 Beta-lactamase VVMO6_04265 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_04265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_04270 PF08019 Phosphoethanolamine transferase EptA/EptB VVMO6_04270 PF00884 Sulfatase VVMO6_04275 PF01758 Sodium Bile acid symporter family VVMO6_04276 PF01022 Bacterial regulatory protein, arsR family VVMO6_04280 PF03466 LysR substrate binding domain VVMO6_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04284 PF07687 Peptidase dimerisation domain VVMO6_04284 PF01546 Peptidase family M20/M25/M40 VVMO6_04285 PF07670 Nucleoside recognition VVMO6_04286 PF07670 Nucleoside recognition VVMO6_04288 PF00128 Alpha amylase, catalytic domain VVMO6_04289 PF14583 Oligogalacturonate lyase VVMO6_04290 PF00474 Sodium:solute symporter family VVMO6_04291 PF13229 Right handed beta helix region VVMO6_04294 PF06917 Periplasmic pectate lyase VVMO6_04295 PF06917 Periplasmic pectate lyase VVMO6_04299 PF01081 KDPG and KHG aldolase VVMO6_04300 PF00294 pfkB family carbohydrate kinase VVMO6_04301 PF00892 EamA-like transporter family VVMO6_04304 PF07883 Cupin domain VVMO6_04305 PF10688 Bacterial inner membrane protein VVMO6_04307 PF09339 IclR helix-turn-helix domain VVMO6_04307 PF01614 Bacterial transcriptional regulator VVMO6_04312 PF00795 Carbon-nitrogen hydrolase VVMO6_04312 PF00583 Acetyltransferase (GNAT) family VVMO6_04316 PF00924 Mechanosensitive ion channel VVMO6_04319 PF00873 AcrB/AcrD/AcrF family VVMO6_04320 PF13533 Biotin-lipoyl like VVMO6_04323 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04323 PF00672 HAMP domain VVMO6_04323 PF01627 Hpt domain VVMO6_04323 PF00072 Response regulator receiver domain VVMO6_04323 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_04324 PF00293 NUDIX domain VVMO6_04325 PF01161 Phosphatidylethanolamine-binding protein VVMO6_04326 PF12833 Helix-turn-helix domain VVMO6_04327 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VVMO6_04328 PF00376 MerR family regulatory protein VVMO6_04328 PF09278 MerR, DNA binding VVMO6_04330 PF02378 Phosphotransferase system, EIIC VVMO6_04330 PF00367 phosphotransferase system, EIIB VVMO6_04331 PF00072 Response regulator receiver domain VVMO6_04331 PF00486 Transcriptional regulatory protein, C terminal VVMO6_04332 PF00672 HAMP domain VVMO6_04332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04332 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04335 PF17151 Periplasmic sensor domain VVMO6_04335 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04336 PF00583 Acetyltransferase (GNAT) family VVMO6_04337 PF14492 Elongation Factor G, domain II VVMO6_04337 PF03764 Elongation factor G, domain IV VVMO6_04337 PF03144 Elongation factor Tu domain 2 VVMO6_04337 PF00009 Elongation factor Tu GTP binding domain VVMO6_04337 PF00679 Elongation factor G C-terminus VVMO6_04340 PF02001 Protein of unknown function DUF134 VVMO6_04342 PF03150 Di-haem cytochrome c peroxidase VVMO6_04342 PF00034 Cytochrome c VVMO6_04343 PF06942 GlpM protein VVMO6_04346 PF02311 AraC-like ligand binding domain VVMO6_04346 PF12833 Helix-turn-helix domain VVMO6_04347 PF07690 Major Facilitator Superfamily VVMO6_04351 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VVMO6_04353 PF00892 EamA-like transporter family VVMO6_04354 PF00970 Oxidoreductase FAD-binding domain VVMO6_04354 PF00175 Oxidoreductase NAD-binding domain VVMO6_04357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04357 PF03466 LysR substrate binding domain VVMO6_04359 PF00881 Nitroreductase family VVMO6_04360 PF00561 alpha/beta hydrolase fold VVMO6_04361 PF00271 Helicase conserved C-terminal domain VVMO6_04361 PF00270 DEAD/DEAH box helicase VVMO6_04367 PF04151 Bacterial pre-peptidase C-terminal domain VVMO6_04367 PF02868 Thermolysin metallopeptidase, alpha-helical domain VVMO6_04367 PF01447 Thermolysin metallopeptidase, catalytic domain VVMO6_04367 PF03413 Peptidase propeptide and YPEB domain VVMO6_04367 PF07504 Fungalysin/Thermolysin Propeptide Motif VVMO6_04368 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VVMO6_04368 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VVMO6_04370 PF13599 Pentapeptide repeats (9 copies) VVMO6_04372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04372 PF00672 HAMP domain VVMO6_04373 PF01627 Hpt domain VVMO6_04373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04373 PF00672 HAMP domain VVMO6_04373 PF00072 Response regulator receiver domain VVMO6_04373 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04373 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VVMO6_04374 PF00072 Response regulator receiver domain VVMO6_04376 PF01266 FAD dependent oxidoreductase VVMO6_04379 PF00158 Sigma-54 interaction domain VVMO6_04379 PF00072 Response regulator receiver domain VVMO6_04379 PF02954 Bacterial regulatory protein, Fis family VVMO6_04380 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04380 PF02743 Cache domain VVMO6_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04382 PF14864 Alkyl sulfatase C-terminal VVMO6_04382 PF14863 Alkyl sulfatase dimerisation VVMO6_04382 PF00753 Metallo-beta-lactamase superfamily VVMO6_04384 PF00072 Response regulator receiver domain VVMO6_04384 PF00486 Transcriptional regulatory protein, C terminal VVMO6_04385 PF00672 HAMP domain VVMO6_04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04385 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04386 PF03466 LysR substrate binding domain VVMO6_04386 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04387 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VVMO6_04387 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_04389 PF08267 Cobalamin-independent synthase, N-terminal domain VVMO6_04389 PF01717 Cobalamin-independent synthase, Catalytic domain VVMO6_04392 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04392 PF17158 Membrane-associated sensor, integral membrane domain VVMO6_04396 PF02811 PHP domain VVMO6_04396 PF11490 DNA polymerase III polC-type N-terminus II VVMO6_04396 PF14579 Helix-hairpin-helix motif VVMO6_04396 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VVMO6_04396 PF00929 Exonuclease VVMO6_04396 PF07733 Bacterial DNA polymerase III alpha NTPase domain VVMO6_04397 PF12704 MacB-like periplasmic core domain VVMO6_04397 PF02687 FtsX-like permease family VVMO6_04397 PF00005 ABC transporter VVMO6_04398 PF00005 ABC transporter VVMO6_04398 PF02687 FtsX-like permease family VVMO6_04398 PF12704 MacB-like periplasmic core domain VVMO6_04399 PF02687 FtsX-like permease family VVMO6_04399 PF00005 ABC transporter VVMO6_04399 PF12704 MacB-like periplasmic core domain VVMO6_04404 PF00005 ABC transporter VVMO6_04405 PF01497 Periplasmic binding protein VVMO6_04406 PF01032 FecCD transport family VVMO6_04408 PF00593 TonB dependent receptor VVMO6_04408 PF07715 TonB-dependent Receptor Plug Domain VVMO6_04409 PF12848 ABC transporter VVMO6_04409 PF00005 ABC transporter VVMO6_04410 PF01116 Fructose-bisphosphate aldolase class-II VVMO6_04411 PF01979 Amidohydrolase family VVMO6_04412 PF03610 PTS system fructose IIA component VVMO6_04413 PF03613 PTS system mannose/fructose/sorbose family IID component VVMO6_04414 PF03609 PTS system sorbose-specific iic component VVMO6_04415 PF03830 PTS system sorbose subfamily IIB component VVMO6_04416 PF01380 SIS domain VVMO6_04417 PF08013 Tagatose 6 phosphate kinase VVMO6_04418 PF08220 DeoR-like helix-turn-helix domain VVMO6_04418 PF00455 DeoR C terminal sensor domain VVMO6_04419 PF08220 DeoR-like helix-turn-helix domain VVMO6_04419 PF00455 DeoR C terminal sensor domain VVMO6_04420 PF00892 EamA-like transporter family VVMO6_04421 PF12852 Cupin VVMO6_04421 PF12833 Helix-turn-helix domain VVMO6_04423 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VVMO6_04423 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VVMO6_04424 PF03466 LysR substrate binding domain VVMO6_04424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04425 PF14863 Alkyl sulfatase dimerisation VVMO6_04425 PF00753 Metallo-beta-lactamase superfamily VVMO6_04425 PF14864 Alkyl sulfatase C-terminal VVMO6_04430 PF01641 SelR domain VVMO6_04431 PF01625 Peptide methionine sulfoxide reductase VVMO6_04435 PF00672 HAMP domain VVMO6_04435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04438 PF00462 Glutaredoxin VVMO6_04439 PF12833 Helix-turn-helix domain VVMO6_04439 PF12852 Cupin VVMO6_04442 PF03466 LysR substrate binding domain VVMO6_04442 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04443 PF02056 Family 4 glycosyl hydrolase VVMO6_04443 PF11975 Family 4 glycosyl hydrolase C-terminal domain VVMO6_04447 PF03475 3-alpha domain VVMO6_04447 PF03473 MOSC domain VVMO6_04449 PF00892 EamA-like transporter family VVMO6_04450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VVMO6_04450 PF01276 Orn/Lys/Arg decarboxylase, major domain VVMO6_04451 PF00857 Isochorismatase family VVMO6_04452 PF00356 Bacterial regulatory proteins, lacI family VVMO6_04453 PF03553 Na+/H+ antiporter family VVMO6_04454 PF00155 Aminotransferase class I and II VVMO6_04455 PF00271 Helicase conserved C-terminal domain VVMO6_04455 PF00270 DEAD/DEAH box helicase VVMO6_04456 PF03786 D-mannonate dehydratase (UxuA) VVMO6_04457 PF07729 FCD domain VVMO6_04457 PF00392 Bacterial regulatory proteins, gntR family VVMO6_04458 PF03480 Bacterial extracellular solute-binding protein, family 7 VVMO6_04459 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VVMO6_04460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VVMO6_04461 PF01232 Mannitol dehydrogenase Rossmann domain VVMO6_04461 PF08125 Mannitol dehydrogenase C-terminal domain VVMO6_04462 PF02614 Glucuronate isomerase VVMO6_04463 PF00294 pfkB family carbohydrate kinase VVMO6_04464 PF01081 KDPG and KHG aldolase VVMO6_04465 PF10688 Bacterial inner membrane protein VVMO6_04466 PF03466 LysR substrate binding domain VVMO6_04466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04468 PF04399 Glutaredoxin 2, C terminal domain VVMO6_04468 PF13417 Glutathione S-transferase, N-terminal domain VVMO6_04469 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VVMO6_04471 PF08220 DeoR-like helix-turn-helix domain VVMO6_04471 PF00455 DeoR C terminal sensor domain VVMO6_04472 PF03611 PTS system sugar-specific permease component VVMO6_04473 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VVMO6_04474 PF00596 Class II Aldolase and Adducin N-terminal domain VVMO6_04476 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VVMO6_04477 PF01261 Xylose isomerase-like TIM barrel VVMO6_04480 PF00005 ABC transporter VVMO6_04480 PF00664 ABC transporter transmembrane region VVMO6_04481 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VVMO6_04481 PF02278 Polysaccharide lyase family 8, super-sandwich domain VVMO6_04481 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VVMO6_04482 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain VVMO6_04482 PF17385 Lacto-N-biose phosphorylase central domain VVMO6_04482 PF17386 Lacto-N-biose phosphorylase C-terminal domain VVMO6_04483 PF07470 Glycosyl Hydrolase Family 88 VVMO6_04486 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VVMO6_04486 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VVMO6_04487 PF16363 GDP-mannose 4,6 dehydratase VVMO6_04488 PF01740 STAS domain VVMO6_04488 PF00916 Sulfate permease family VVMO6_04491 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04491 PF00672 HAMP domain VVMO6_04492 PF00005 ABC transporter VVMO6_04492 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VVMO6_04493 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_04493 PF12911 N-terminal TM domain of oligopeptide transport permease C VVMO6_04494 PF00528 Binding-protein-dependent transport system inner membrane component VVMO6_04496 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VVMO6_04498 PF16347 Domain of unknown function (DUF4976) VVMO6_04499 PF13186 Iron-sulfur cluster-binding domain VVMO6_04499 PF04055 Radical SAM superfamily VVMO6_04500 PF00884 Sulfatase VVMO6_04501 PF16385 Domain of unknown function VVMO6_04501 PF00884 Sulfatase VVMO6_04502 PF02278 Polysaccharide lyase family 8, super-sandwich domain VVMO6_04502 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VVMO6_04502 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VVMO6_04504 PF01037 Lrp/AsnC ligand binding domain VVMO6_04507 PF00474 Sodium:solute symporter family VVMO6_04509 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VVMO6_04509 PF14850 DNA-binding domain of Proline dehydrogenase VVMO6_04509 PF01619 Proline dehydrogenase VVMO6_04509 PF00171 Aldehyde dehydrogenase family VVMO6_04510 PF12833 Helix-turn-helix domain VVMO6_04513 PF01243 Pyridoxamine 5'-phosphate oxidase VVMO6_04513 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VVMO6_04514 PF00512 His Kinase A (phospho-acceptor) domain VVMO6_04514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04514 PF02743 Cache domain VVMO6_04515 PF00072 Response regulator receiver domain VVMO6_04515 PF02954 Bacterial regulatory protein, Fis family VVMO6_04515 PF00158 Sigma-54 interaction domain VVMO6_04516 PF00529 HlyD membrane-fusion protein of T1SS VVMO6_04519 PF00664 ABC transporter transmembrane region VVMO6_04519 PF00005 ABC transporter VVMO6_04519 PF03412 Peptidase C39 family VVMO6_04522 PF00118 TCP-1/cpn60 chaperonin family VVMO6_04523 PF00166 Chaperonin 10 Kd subunit VVMO6_04524 PF12464 Maltose acetyltransferase VVMO6_04524 PF14602 Hexapeptide repeat of succinyl-transferase VVMO6_04527 PF01189 16S rRNA methyltransferase RsmB/F VVMO6_04527 PF01029 NusB family VVMO6_04529 PF01418 Helix-turn-helix domain, rpiR family VVMO6_04529 PF01380 SIS domain VVMO6_04530 PF13580 SIS domain VVMO6_04531 PF02378 Phosphotransferase system, EIIC VVMO6_04531 PF00367 phosphotransferase system, EIIB VVMO6_04533 PF00300 Histidine phosphatase superfamily (branch 1) VVMO6_04535 PF04151 Bacterial pre-peptidase C-terminal domain VVMO6_04535 PF08453 Peptidase family M9 N-terminal VVMO6_04535 PF01752 Collagenase VVMO6_04536 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04536 PF03466 LysR substrate binding domain VVMO6_04537 PF17848 Acetyl-coA carboxylase zinc finger domain VVMO6_04537 PF01039 Carboxyl transferase domain VVMO6_04540 PF02899 Phage integrase, N-terminal SAM-like domain VVMO6_04540 PF00589 Phage integrase family VVMO6_04541 PF03466 LysR substrate binding domain VVMO6_04541 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VVMO6_04548 PF00990 Diguanylate cyclase, GGDEF domain VVMO6_04548 PF00072 Response regulator receiver domain VVMO6_04550 PF00672 HAMP domain VVMO6_04550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04550 PF02203 Tar ligand binding domain homologue VVMO6_04551 PF00072 Response regulator receiver domain VVMO6_04551 PF01339 CheB methylesterase VVMO6_04552 PF03975 CheD chemotactic sensory transduction VVMO6_04553 PF03705 CheR methyltransferase, all-alpha domain VVMO6_04553 PF01739 CheR methyltransferase, SAM binding domain VVMO6_04554 PF00672 HAMP domain VVMO6_04554 PF02203 Tar ligand binding domain homologue VVMO6_04554 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VVMO6_04555 PF01584 CheW-like domain VVMO6_04556 PF01584 CheW-like domain VVMO6_04557 PF09078 CheY binding VVMO6_04557 PF02895 Signal transducing histidine kinase, homodimeric domain VVMO6_04557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VVMO6_04557 PF01627 Hpt domain VVMO6_04557 PF01584 CheW-like domain VVMO6_04558 PF00072 Response regulator receiver domain VVMO6_04560 PF13718 GNAT acetyltransferase 2 VVMO6_04560 PF05127 Helicase VVMO6_04561 PF02195 ParB-like nuclease domain VVMO6_04561 PF08775 ParB family VVMO6_04562 PF13614 AAA domain VVMO6_04562 PF18607 ParA helix turn helix domain