VVMO6_00001 SM01228 VVMO6_00001 VVMO6_00004 SM00470 ParB-like nuclease domain VVMO6_00012 SM00382 ATPases associated with a variety of cellular activities VVMO6_00016 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_00024 SM00382 ATPases associated with a variety of cellular activities VVMO6_00026 SM00563 Phosphate acyltransferases VVMO6_00039 SM00257 Lysin motif VVMO6_00044 SM01001 AIR carboxylase VVMO6_00062 SM00382 ATPases associated with a variety of cellular activities VVMO6_00072 SM00220 Serine/Threonine protein kinases, catalytic domain VVMO6_00074 SM00448 cheY-homologous receiver domain VVMO6_00075 SM00354 helix_turn _helix lactose operon repressor VVMO6_00085 SM00344 helix_turn_helix ASNC type VVMO6_00086 SM00052 Putative diguanylate phosphodiesterase VVMO6_00086 SM00091 PAS domain VVMO6_00086 SM00267 diguanylate cyclase VVMO6_00095 SM00028 Tetratricopeptide repeats VVMO6_00100 SM01219 VVMO6_00100 VVMO6_00107 SM00052 Putative diguanylate phosphodiesterase VVMO6_00107 SM00267 diguanylate cyclase VVMO6_00107 SM00897 FIST N domain VVMO6_00107 SM01204 VVMO6_00107 VVMO6_00108 SM01144 VVMO6_00108 VVMO6_00115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VVMO6_00116 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_00117 SM00404 Protein tyrosine phosphatase, catalytic domain motif VVMO6_00128 SM00382 ATPases associated with a variety of cellular activities VVMO6_00128 SM00962 SRP54-type protein, GTPase domain VVMO6_00128 SM00963 SRP54-type protein, helical bundle domain VVMO6_00129 SM00382 ATPases associated with a variety of cellular activities VVMO6_00133 SM00450 Rhodanese Homology Domain VVMO6_00139 SM00563 Phosphate acyltransferases VVMO6_00149 SM00360 RNA recognition motif VVMO6_00152 SM00155 Phospholipase D. Active site motifs. VVMO6_00159 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VVMO6_00159 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VVMO6_00160 SM00649 Ribosomal protein L11/L12 VVMO6_00165 SM00663 RNA polymerase I subunit A N-terminus VVMO6_00171 SM00986 Uracil DNA glycosylase superfamily VVMO6_00171 SM00987 UreE urease accessory protein, C-terminal domain VVMO6_00175 SM00411 bacterial (prokaryotic) histone like domain VVMO6_00177 SM01209 VVMO6_00177 VVMO6_00177 SM01210 VVMO6_00177 VVMO6_00178 SM00798 AICARFT/IMPCHase bienzyme VVMO6_00178 SM00851 MGS-like domain VVMO6_00179 SM00422 helix_turn_helix, mercury resistance VVMO6_00180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00180 SM01049 VVMO6_00180 VVMO6_00184 SM00878 Biotin carboxylase C-terminal domain VVMO6_00188 SM00479 VVMO6_00188 VVMO6_00189 SM00100 Cyclic nucleotide-monophosphate binding domain VVMO6_00191 SM00387 Histidine kinase-like ATPases VVMO6_00191 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00191 SM00448 cheY-homologous receiver domain VVMO6_00196 SM00421 helix_turn_helix, Lux Regulon VVMO6_00196 SM00448 cheY-homologous receiver domain VVMO6_00203 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00203 SM00387 Histidine kinase-like ATPases VVMO6_00203 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00204 SM00448 cheY-homologous receiver domain VVMO6_00204 SM00862 Transcriptional regulatory protein, C terminal VVMO6_00209 SM00883 Chaperonin 10 Kd subunit VVMO6_00214 SM00841 Elongation factor P, C-terminal VVMO6_00214 SM01185 VVMO6_00214 VVMO6_00225 SM00971 Serine acetyltransferase, N-terminal VVMO6_00228 SM00450 Rhodanese Homology Domain VVMO6_00235 SM00479 VVMO6_00235 VVMO6_00238 SM00257 Lysin motif VVMO6_00238 SM00646 VVMO6_00238 VVMO6_00239 SM00853 MutL C terminal dimerisation domain VVMO6_00239 SM01340 VVMO6_00239 VVMO6_00243 SM00244 prohibitin homologues VVMO6_00244 SM00244 prohibitin homologues VVMO6_00246 SM00788 Adenylosuccinate synthetase VVMO6_00247 SM00671 Sel1-like repeats. VVMO6_00251 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_00251 SM00357 Cold shock protein domain VVMO6_00251 SM00955 VVMO6_00251 VVMO6_00252 SM00967 RNA 2'-O ribose methyltransferase substrate binding VVMO6_00261 SM01150 VVMO6_00261 VVMO6_00262 SM00100 Cyclic nucleotide-monophosphate binding domain VVMO6_00262 SM00419 helix_turn_helix, cAMP Regulatory protein VVMO6_00267 SM00382 ATPases associated with a variety of cellular activities VVMO6_00275 SM00320 WD40 repeats VVMO6_00283 SM00838 Elongation factor G C-terminus VVMO6_00283 SM00889 Elongation factor G, domain IV VVMO6_00297 SM00382 ATPases associated with a variety of cellular activities VVMO6_00297 SM01086 C-terminal, D2-small domain, of ClpB protein VVMO6_00300 SM00354 helix_turn _helix lactose operon repressor VVMO6_00301 SM00487 DEAD-like helicases superfamily VVMO6_00301 SM00490 helicase superfamily c-terminal domain VVMO6_00303 SM00919 Malic enzyme, NAD binding domain VVMO6_00303 SM01274 VVMO6_00303 VVMO6_00312 SM00859 Semialdehyde dehydrogenase, NAD binding domain VVMO6_00323 SM00965 Secretin and TonB N terminus short domain VVMO6_00335 SM01005 Alanine racemase, C-terminal domain VVMO6_00350 SM00897 FIST N domain VVMO6_00350 SM01204 VVMO6_00350 VVMO6_00351 SM00091 PAS domain VVMO6_00351 SM00267 diguanylate cyclase VVMO6_00353 SM01018 B12 binding domain VVMO6_00359 SM00421 helix_turn_helix, Lux Regulon VVMO6_00361 SM00052 Putative diguanylate phosphodiesterase VVMO6_00361 SM00267 diguanylate cyclase VVMO6_00365 SM00965 Secretin and TonB N terminus short domain VVMO6_00367 SM00028 Tetratricopeptide repeats VVMO6_00368 SM00382 ATPases associated with a variety of cellular activities VVMO6_00382 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_00386 SM00670 Large family of predicted nucleotide-binding domains VVMO6_00387 SM00487 DEAD-like helicases superfamily VVMO6_00387 SM00490 helicase superfamily c-terminal domain VVMO6_00409 SM00495 Chitin-binding domain type 3 VVMO6_00415 SM00354 helix_turn _helix lactose operon repressor VVMO6_00417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_00418 SM00849 Metallo-beta-lactamase superfamily VVMO6_00420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00420 SM01049 VVMO6_00420 VVMO6_00423 SM00478 endonuclease III VVMO6_00423 SM00525 VVMO6_00423 VVMO6_00426 SM00478 endonuclease III VVMO6_00427 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_00430 SM01152 VVMO6_00430 VVMO6_00436 SM00732 Likely ribonuclease with RNase H fold. VVMO6_00442 SM00731 SprT homologues. VVMO6_00445 SM00861 Transketolase, pyrimidine binding domain VVMO6_00447 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_00472 SM00838 Elongation factor G C-terminus VVMO6_00474 SM00358 Double-stranded RNA binding motif VVMO6_00474 SM00535 Ribonuclease III family VVMO6_00481 SM00267 diguanylate cyclase VVMO6_00483 SM00073 Histidine Phosphotransfer domain VVMO6_00483 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00483 SM00387 Histidine kinase-like ATPases VVMO6_00483 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00483 SM00448 cheY-homologous receiver domain VVMO6_00485 SM00954 Region found in RelA / SpoT proteins VVMO6_00488 SM01192 VVMO6_00488 VVMO6_00488 SM01193 VVMO6_00488 VVMO6_00496 SM00257 Lysin motif VVMO6_00498 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VVMO6_00498 SM00534 ATPase domain of DNA mismatch repair MUTS family VVMO6_00500 SM00382 ATPases associated with a variety of cellular activities VVMO6_00502 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VVMO6_00508 SM00829 Enoylreductase VVMO6_00514 SM01091 Transporter associated domain VVMO6_00516 SM00382 ATPases associated with a variety of cellular activities VVMO6_00516 SM00962 SRP54-type protein, GTPase domain VVMO6_00516 SM00963 SRP54-type protein, helical bundle domain VVMO6_00529 SM00644 VVMO6_00529 VVMO6_00531 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_00531 SM00895 VVMO6_00531 VVMO6_00537 SM00947 Carbonic anhydrase VVMO6_00539 SM00382 ATPases associated with a variety of cellular activities VVMO6_00548 SM00487 DEAD-like helicases superfamily VVMO6_00548 SM00490 helicase superfamily c-terminal domain VVMO6_00548 SM00847 Helicase associated domain (HA2) Add an annotation VVMO6_00556 SM00938 Nitrogen regulatory protein P-II VVMO6_00560 SM00382 ATPases associated with a variety of cellular activities VVMO6_00562 SM01068 Putative carbohydrate binding domain VVMO6_00566 SM00382 ATPases associated with a variety of cellular activities VVMO6_00567 SM00382 ATPases associated with a variety of cellular activities VVMO6_00571 SM00091 PAS domain VVMO6_00571 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00571 SM00387 Histidine kinase-like ATPases VVMO6_00571 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00571 SM00448 cheY-homologous receiver domain VVMO6_00586 SM01103 VVMO6_00586 VVMO6_00588 SM00382 ATPases associated with a variety of cellular activities VVMO6_00594 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_00598 SM01387 VVMO6_00598 VVMO6_00605 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_00605 SM00322 K homology RNA-binding domain VVMO6_00606 SM00028 Tetratricopeptide repeats VVMO6_00607 SM00347 helix_turn_helix multiple antibiotic resistance protein VVMO6_00611 SM00052 Putative diguanylate phosphodiesterase VVMO6_00611 SM00091 PAS domain VVMO6_00611 SM00267 diguanylate cyclase VVMO6_00616 SM00052 Putative diguanylate phosphodiesterase VVMO6_00616 SM00267 diguanylate cyclase VVMO6_00617 SM00267 diguanylate cyclase VVMO6_00622 SM01133 VVMO6_00622 VVMO6_00623 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VVMO6_00629 SM00382 ATPases associated with a variety of cellular activities VVMO6_00630 SM00267 diguanylate cyclase VVMO6_00633 SM00838 Elongation factor G C-terminus VVMO6_00633 SM00889 Elongation factor G, domain IV VVMO6_00637 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_00642 SM00858 VVMO6_00642 VVMO6_00652 SM00028 Tetratricopeptide repeats VVMO6_00660 SM01038 Beta galactosidase small chain VVMO6_00662 SM00354 helix_turn _helix lactose operon repressor VVMO6_00667 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00667 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00667 SM01049 VVMO6_00667 VVMO6_00669 SM00354 helix_turn _helix lactose operon repressor VVMO6_00677 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_00677 SM01134 VVMO6_00677 VVMO6_00693 SM00925 MltA specific insert domain VVMO6_00711 SM00900 VVMO6_00711 VVMO6_00717 SM00267 diguanylate cyclase VVMO6_00717 SM00448 cheY-homologous receiver domain VVMO6_00719 SM00487 DEAD-like helicases superfamily VVMO6_00719 SM00490 helicase superfamily c-terminal domain VVMO6_00721 SM00495 Chitin-binding domain type 3 VVMO6_00721 SM00636 VVMO6_00721 VVMO6_00733 SM00849 Metallo-beta-lactamase superfamily VVMO6_00744 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_00753 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VVMO6_00755 SM00935 Outer membrane protein (OmpH-like) VVMO6_00761 SM00481 DNA polymerase alpha chain like domain VVMO6_00763 SM00977 TilS substrate C-terminal domain VVMO6_00765 SM00938 Nitrogen regulatory protein P-II VVMO6_00768 SM00257 Lysin motif VVMO6_00769 SM00849 Metallo-beta-lactamase superfamily VVMO6_00772 SM00479 VVMO6_00772 VVMO6_00791 SM00028 Tetratricopeptide repeats VVMO6_00796 SM01130 VVMO6_00796 VVMO6_00814 SM00382 ATPases associated with a variety of cellular activities VVMO6_00815 SM00387 Histidine kinase-like ATPases VVMO6_00815 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00816 SM00382 ATPases associated with a variety of cellular activities VVMO6_00816 SM00448 cheY-homologous receiver domain VVMO6_00821 SM00382 ATPases associated with a variety of cellular activities VVMO6_00833 SM00382 ATPases associated with a variety of cellular activities VVMO6_00833 SM00962 SRP54-type protein, GTPase domain VVMO6_00836 SM00448 cheY-homologous receiver domain VVMO6_00838 SM00073 Histidine Phosphotransfer domain VVMO6_00838 SM00260 Two component signalling adaptor domain VVMO6_00838 SM00387 Histidine kinase-like ATPases VVMO6_00838 SM01231 VVMO6_00838 VVMO6_00839 SM00448 cheY-homologous receiver domain VVMO6_00841 SM00260 Two component signalling adaptor domain VVMO6_00842 SM00260 Two component signalling adaptor domain VVMO6_00844 SM00382 ATPases associated with a variety of cellular activities VVMO6_00862 SM00855 Phosphoglycerate mutase family VVMO6_00863 SM00463 Small MutS-related domain VVMO6_00870 SM00825 Beta-ketoacyl synthase VVMO6_00872 SM00859 Semialdehyde dehydrogenase, NAD binding domain VVMO6_00881 SM00448 cheY-homologous receiver domain VVMO6_00886 SM00382 ATPases associated with a variety of cellular activities VVMO6_00888 SM00493 VVMO6_00888 VVMO6_00891 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00891 SM00387 Histidine kinase-like ATPases VVMO6_00891 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_00892 SM00448 cheY-homologous receiver domain VVMO6_00892 SM00862 Transcriptional regulatory protein, C terminal VVMO6_00899 SM00098 Alkaline phosphatase homologues VVMO6_00914 SM00487 DEAD-like helicases superfamily VVMO6_00915 SM00530 Helix-turn-helix XRE-family like proteins VVMO6_00921 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_00926 SM00267 diguanylate cyclase VVMO6_00928 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00928 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00930 SM00862 Transcriptional regulatory protein, C terminal VVMO6_00935 SM00267 diguanylate cyclase VVMO6_00936 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_00940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00950 SM00487 DEAD-like helicases superfamily VVMO6_00950 SM00490 helicase superfamily c-terminal domain VVMO6_00950 SM00982 VVMO6_00950 VVMO6_00950 SM01058 CarD-like/TRCF domain VVMO6_00953 SM00382 ATPases associated with a variety of cellular activities VVMO6_00956 SM00849 Metallo-beta-lactamase superfamily VVMO6_00957 SM00382 ATPases associated with a variety of cellular activities VVMO6_00961 SM00267 diguanylate cyclase VVMO6_00964 SM00763 PrkA AAA domain VVMO6_00969 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00969 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00974 SM00382 ATPases associated with a variety of cellular activities VVMO6_00975 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_00975 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VVMO6_00978 SM01276 VVMO6_00978 VVMO6_00980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_00980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_00984 SM00491 VVMO6_00984 VVMO6_00989 SM00357 Cold shock protein domain VVMO6_00991 SM00382 ATPases associated with a variety of cellular activities VVMO6_00991 SM01086 C-terminal, D2-small domain, of ClpB protein VVMO6_00992 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_00999 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VVMO6_00999 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VVMO6_00999 SM00493 VVMO6_00999 VVMO6_01006 SM00354 helix_turn _helix lactose operon repressor VVMO6_01008 SM00448 cheY-homologous receiver domain VVMO6_01008 SM00862 Transcriptional regulatory protein, C terminal VVMO6_01014 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_01025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01026 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VVMO6_01027 SM00382 ATPases associated with a variety of cellular activities VVMO6_01038 SM00028 Tetratricopeptide repeats VVMO6_01046 SM00387 Histidine kinase-like ATPases VVMO6_01046 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_01046 SM00448 cheY-homologous receiver domain VVMO6_01054 SM00487 DEAD-like helicases superfamily VVMO6_01054 SM00490 helicase superfamily c-terminal domain VVMO6_01057 SM00530 Helix-turn-helix XRE-family like proteins VVMO6_01065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01067 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_01067 SM01134 VVMO6_01067 VVMO6_01072 SM01007 Class II Aldolase and Adducin N-terminal domain VVMO6_01083 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_01086 SM00052 Putative diguanylate phosphodiesterase VVMO6_01086 SM00267 diguanylate cyclase VVMO6_01086 SM01049 VVMO6_01086 VVMO6_01087 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_01088 SM00052 Putative diguanylate phosphodiesterase VVMO6_01088 SM00091 PAS domain VVMO6_01089 SM00052 Putative diguanylate phosphodiesterase VVMO6_01089 SM00091 PAS domain VVMO6_01100 SM00382 ATPases associated with a variety of cellular activities VVMO6_01101 SM00642 Alpha-amylase domain VVMO6_01102 SM00267 diguanylate cyclase VVMO6_01107 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_01113 SM00387 Histidine kinase-like ATPases VVMO6_01113 SM01049 VVMO6_01113 VVMO6_01114 SM00421 helix_turn_helix, Lux Regulon VVMO6_01114 SM00448 cheY-homologous receiver domain VVMO6_01115 SM00347 helix_turn_helix multiple antibiotic resistance protein VVMO6_01117 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01117 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01118 SM00479 VVMO6_01118 VVMO6_01119 SM00100 Cyclic nucleotide-monophosphate binding domain VVMO6_01119 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_01123 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_01126 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_01129 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01129 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01132 SM00052 Putative diguanylate phosphodiesterase VVMO6_01137 SM00387 Histidine kinase-like ATPases VVMO6_01137 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_01137 SM00448 cheY-homologous receiver domain VVMO6_01144 SM00091 PAS domain VVMO6_01144 SM00382 ATPases associated with a variety of cellular activities VVMO6_01149 SM00100 Cyclic nucleotide-monophosphate binding domain VVMO6_01149 SM00387 Histidine kinase-like ATPases VVMO6_01150 SM00448 cheY-homologous receiver domain VVMO6_01151 SM00267 diguanylate cyclase VVMO6_01152 SM00052 Putative diguanylate phosphodiesterase VVMO6_01152 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VVMO6_01152 SM00267 diguanylate cyclase VVMO6_01154 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_01155 SM00052 Putative diguanylate phosphodiesterase VVMO6_01155 SM00267 diguanylate cyclase VVMO6_01161 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VVMO6_01163 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_01166 SM00046 Diacylglycerol kinase catalytic domain (presumed) VVMO6_01173 SM00382 ATPases associated with a variety of cellular activities VVMO6_01174 SM00382 ATPases associated with a variety of cellular activities VVMO6_01190 SM00267 diguanylate cyclase VVMO6_01197 SM00267 diguanylate cyclase VVMO6_01197 SM01079 VVMO6_01197 VVMO6_01198 SM00479 VVMO6_01198 VVMO6_01206 SM00858 VVMO6_01206 VVMO6_01213 SM00028 Tetratricopeptide repeats VVMO6_01218 SM00636 VVMO6_01218 VVMO6_01219 SM00382 ATPases associated with a variety of cellular activities VVMO6_01219 SM00487 DEAD-like helicases superfamily VVMO6_01219 SM00490 helicase superfamily c-terminal domain VVMO6_01219 SM00847 Helicase associated domain (HA2) Add an annotation VVMO6_01228 SM00448 cheY-homologous receiver domain VVMO6_01228 SM00850 LytTr DNA-binding domain VVMO6_01234 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01234 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01242 SM00530 Helix-turn-helix XRE-family like proteins VVMO6_01249 SM00267 diguanylate cyclase VVMO6_01251 SM00873 B3/4 domain VVMO6_01251 SM00874 tRNA synthetase B5 domain VVMO6_01251 SM00896 Ferredoxin-fold anticodon binding domain VVMO6_01255 SM00411 bacterial (prokaryotic) histone like domain VVMO6_01256 SM00954 Region found in RelA / SpoT proteins VVMO6_01261 SM00671 Sel1-like repeats. VVMO6_01267 SM00020 Trypsin-like serine protease VVMO6_01273 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_01273 SM00866 VVMO6_01273 VVMO6_01276 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VVMO6_01368 SM01022 VVMO6_01368 VVMO6_01389 SM01022 VVMO6_01389 VVMO6_01395 SM00978 VVMO6_01395 VVMO6_01449 SM01022 VVMO6_01449 VVMO6_01469 SM00448 cheY-homologous receiver domain VVMO6_01470 SM00267 diguanylate cyclase VVMO6_01473 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01475 SM01144 VVMO6_01475 VVMO6_01478 SM00852 Probable molybdopterin binding domain VVMO6_01480 SM00382 ATPases associated with a variety of cellular activities VVMO6_01483 SM00382 ATPases associated with a variety of cellular activities VVMO6_01483 SM00448 cheY-homologous receiver domain VVMO6_01484 SM00387 Histidine kinase-like ATPases VVMO6_01484 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_01487 SM00382 ATPases associated with a variety of cellular activities VVMO6_01488 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01488 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01488 SM01358 VVMO6_01488 VVMO6_01495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_01509 SM00382 ATPases associated with a variety of cellular activities VVMO6_01515 SM00100 Cyclic nucleotide-monophosphate binding domain VVMO6_01515 SM00419 helix_turn_helix, cAMP Regulatory protein VVMO6_01525 SM00897 FIST N domain VVMO6_01525 SM01204 VVMO6_01525 VVMO6_01526 SM00387 Histidine kinase-like ATPases VVMO6_01526 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_01526 SM00448 cheY-homologous receiver domain VVMO6_01535 SM00382 ATPases associated with a variety of cellular activities VVMO6_01537 SM00981 VVMO6_01537 VVMO6_01590 SM00244 prohibitin homologues VVMO6_01591 SM00482 DNA polymerase A domain VVMO6_01592 SM00493 VVMO6_01592 VVMO6_01592 SM00778 Zinc-binding domain of primase-helicase VVMO6_01603 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VVMO6_01603 SM00245 tail specific protease VVMO6_01604 SM00945 ProQ/FINO family VVMO6_01606 SM00382 ATPases associated with a variety of cellular activities VVMO6_01615 SM00028 Tetratricopeptide repeats VVMO6_01615 SM00267 diguanylate cyclase VVMO6_01622 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01622 SM00387 Histidine kinase-like ATPases VVMO6_01622 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_01622 SM00448 cheY-homologous receiver domain VVMO6_01623 SM00382 ATPases associated with a variety of cellular activities VVMO6_01623 SM00448 cheY-homologous receiver domain VVMO6_01643 SM01350 VVMO6_01643 VVMO6_01646 SM00448 cheY-homologous receiver domain VVMO6_01647 SM00091 PAS domain VVMO6_01647 SM00387 Histidine kinase-like ATPases VVMO6_01652 SM00421 helix_turn_helix, Lux Regulon VVMO6_01659 SM00563 Phosphate acyltransferases VVMO6_01663 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_01666 SM00382 ATPases associated with a variety of cellular activities VVMO6_01671 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01672 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VVMO6_01673 SM00112 Cadherin repeats. VVMO6_01677 SM00028 Tetratricopeptide repeats VVMO6_01677 SM00267 diguanylate cyclase VVMO6_01681 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01681 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01684 SM00020 Trypsin-like serine protease VVMO6_01684 SM00495 Chitin-binding domain type 3 VVMO6_01691 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_01691 SM00895 VVMO6_01691 VVMO6_01692 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_01692 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01692 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_01701 SM00421 helix_turn_helix, Lux Regulon VVMO6_01702 SM00020 Trypsin-like serine protease VVMO6_01704 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01704 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_01709 SM00382 ATPases associated with a variety of cellular activities VVMO6_01710 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_01710 SM01134 VVMO6_01710 VVMO6_01714 SM00357 Cold shock protein domain VVMO6_01715 SM00267 diguanylate cyclase VVMO6_01719 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_01727 SM00028 Tetratricopeptide repeats VVMO6_01736 SM00382 ATPases associated with a variety of cellular activities VVMO6_01740 SM00855 Phosphoglycerate mutase family VVMO6_01753 SM00487 DEAD-like helicases superfamily VVMO6_01753 SM00490 helicase superfamily c-terminal domain VVMO6_01754 SM00919 Malic enzyme, NAD binding domain VVMO6_01754 SM01274 VVMO6_01754 VVMO6_01757 SM00267 diguanylate cyclase VVMO6_01762 SM00382 ATPases associated with a variety of cellular activities VVMO6_01763 SM00382 ATPases associated with a variety of cellular activities VVMO6_01767 SM00387 Histidine kinase-like ATPases VVMO6_01768 SM00448 cheY-homologous receiver domain VVMO6_01787 SM00382 ATPases associated with a variety of cellular activities VVMO6_01792 SM00363 S4 RNA-binding domain VVMO6_01793 SM00487 DEAD-like helicases superfamily VVMO6_01793 SM00490 helicase superfamily c-terminal domain VVMO6_01795 SM00448 cheY-homologous receiver domain VVMO6_01795 SM00862 Transcriptional regulatory protein, C terminal VVMO6_01796 SM00387 Histidine kinase-like ATPases VVMO6_01800 SM00267 diguanylate cyclase VVMO6_01807 SM00382 ATPases associated with a variety of cellular activities VVMO6_01809 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_01809 SM00382 ATPases associated with a variety of cellular activities VVMO6_01814 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_01814 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_01816 SM00155 Phospholipase D. Active site motifs. VVMO6_01825 SM00382 ATPases associated with a variety of cellular activities VVMO6_01829 SM00382 ATPases associated with a variety of cellular activities VVMO6_01830 SM00382 ATPases associated with a variety of cellular activities VVMO6_01833 SM01131 VVMO6_01833 VVMO6_01852 SM00840 VVMO6_01852 VVMO6_01855 SM00052 Putative diguanylate phosphodiesterase VVMO6_01867 SM00528 Domain in histone-like proteins of HNS family VVMO6_01886 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_01886 SM00876 Biotin and Thiamin Synthesis associated domain VVMO6_01889 SM00382 ATPases associated with a variety of cellular activities VVMO6_01891 SM00843 VVMO6_01891 VVMO6_01892 SM00344 helix_turn_helix ASNC type VVMO6_01893 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VVMO6_01893 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VVMO6_01901 SM00849 Metallo-beta-lactamase superfamily VVMO6_01911 SM00382 ATPases associated with a variety of cellular activities VVMO6_01912 SM00382 ATPases associated with a variety of cellular activities VVMO6_01916 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VVMO6_01917 SM00028 Tetratricopeptide repeats VVMO6_01919 SM00411 bacterial (prokaryotic) histone like domain VVMO6_01920 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_01923 SM00822 VVMO6_01923 VVMO6_01926 SM00481 DNA polymerase alpha chain like domain VVMO6_01927 SM00260 Two component signalling adaptor domain VVMO6_01927 SM00448 cheY-homologous receiver domain VVMO6_01940 SM00825 Beta-ketoacyl synthase VVMO6_01942 SM00822 VVMO6_01942 VVMO6_01943 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VVMO6_01949 SM00363 S4 RNA-binding domain VVMO6_01951 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_01953 SM00226 Low molecular weight phosphatase family VVMO6_01971 SM00434 DNA Topoisomerase IV VVMO6_01977 SM00852 Probable molybdopterin binding domain VVMO6_01984 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VVMO6_01984 SM00465 GIY-YIG type nucleases (URI domain) VVMO6_01985 SM00421 helix_turn_helix, Lux Regulon VVMO6_01985 SM00448 cheY-homologous receiver domain VVMO6_01986 SM00486 DNA polymerase type-B family VVMO6_01987 SM00052 Putative diguanylate phosphodiesterase VVMO6_01989 SM00841 Elongation factor P, C-terminal VVMO6_01989 SM01185 VVMO6_01989 VVMO6_01991 SM00363 S4 RNA-binding domain VVMO6_01994 SM00481 DNA polymerase alpha chain like domain VVMO6_02010 SM00382 ATPases associated with a variety of cellular activities VVMO6_02011 SM00382 ATPases associated with a variety of cellular activities VVMO6_02019 SM00852 Probable molybdopterin binding domain VVMO6_02020 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_02023 SM00382 ATPases associated with a variety of cellular activities VVMO6_02023 SM00448 cheY-homologous receiver domain VVMO6_02024 SM00487 DEAD-like helicases superfamily VVMO6_02024 SM00490 helicase superfamily c-terminal domain VVMO6_02030 SM00900 VVMO6_02030 VVMO6_02032 SM00478 endonuclease III VVMO6_02032 SM00525 VVMO6_02032 VVMO6_02036 SM00479 VVMO6_02036 VVMO6_02047 SM00859 Semialdehyde dehydrogenase, NAD binding domain VVMO6_02063 SM00507 HNH nucleases VVMO6_02069 SM00155 Phospholipase D. Active site motifs. VVMO6_02070 SM00267 diguanylate cyclase VVMO6_02070 SM00448 cheY-homologous receiver domain VVMO6_02071 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VVMO6_02071 SM00387 Histidine kinase-like ATPases VVMO6_02071 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02071 SM00448 cheY-homologous receiver domain VVMO6_02073 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VVMO6_02073 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VVMO6_02073 SM00493 VVMO6_02073 VVMO6_02077 SM00870 VVMO6_02077 VVMO6_02081 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_02083 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_02088 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_02088 SM00267 diguanylate cyclase VVMO6_02095 SM00344 helix_turn_helix ASNC type VVMO6_02102 SM00978 VVMO6_02102 VVMO6_02104 SM00563 Phosphate acyltransferases VVMO6_02108 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VVMO6_02114 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_02115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_02116 SM01144 VVMO6_02116 VVMO6_02120 SM00411 bacterial (prokaryotic) histone like domain VVMO6_02121 SM00382 ATPases associated with a variety of cellular activities VVMO6_02121 SM00464 Found in ATP-dependent protease La (LON) VVMO6_02122 SM00382 ATPases associated with a variety of cellular activities VVMO6_02122 SM00994 ClpX C4-type zinc finger VVMO6_02122 SM01086 C-terminal, D2-small domain, of ClpB protein VVMO6_02126 SM00387 Histidine kinase-like ATPases VVMO6_02126 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02127 SM00382 ATPases associated with a variety of cellular activities VVMO6_02127 SM00448 cheY-homologous receiver domain VVMO6_02132 SM00382 ATPases associated with a variety of cellular activities VVMO6_02136 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02136 SM00387 Histidine kinase-like ATPases VVMO6_02137 SM00448 cheY-homologous receiver domain VVMO6_02137 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02139 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_02139 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02146 SM00563 Phosphate acyltransferases VVMO6_02158 SM00825 Beta-ketoacyl synthase VVMO6_02161 SM00825 Beta-ketoacyl synthase VVMO6_02162 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02163 SM00448 cheY-homologous receiver domain VVMO6_02163 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02172 SM00474 3'-5' exonuclease VVMO6_02178 SM00487 DEAD-like helicases superfamily VVMO6_02178 SM00491 VVMO6_02178 VVMO6_02182 SM00836 DALR anticodon binding domain VVMO6_02182 SM01016 Arginyl tRNA synthetase N terminal dom VVMO6_02187 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_02190 SM00382 ATPases associated with a variety of cellular activities VVMO6_02192 SM00881 CoA binding domain VVMO6_02195 SM00861 Transketolase, pyrimidine binding domain VVMO6_02220 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VVMO6_02222 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_02222 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02222 SM01358 VVMO6_02222 VVMO6_02226 SM00387 Histidine kinase-like ATPases VVMO6_02227 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02232 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02233 SM00938 Nitrogen regulatory protein P-II VVMO6_02240 SM00244 prohibitin homologues VVMO6_02244 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VVMO6_02244 SM00292 breast cancer carboxy-terminal domain VVMO6_02244 SM00532 Ligase N family VVMO6_02245 SM00771 ZipA, C-terminal domain (FtsZ-binding) VVMO6_02258 SM00047 Lysozyme subfamily 2 VVMO6_02267 SM00138 Methyltransferase, chemotaxis proteins VVMO6_02268 SM00260 Two component signalling adaptor domain VVMO6_02268 SM00448 cheY-homologous receiver domain VVMO6_02269 SM00858 VVMO6_02269 VVMO6_02282 SM01081 Putative carbohydrate binding domain VVMO6_02285 SM00463 Small MutS-related domain VVMO6_02286 SM00363 S4 RNA-binding domain VVMO6_02293 SM00937 VVMO6_02293 VVMO6_02297 SM01400 VVMO6_02297 VVMO6_02301 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_02304 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02304 SM01091 Transporter associated domain VVMO6_02315 SM00936 Penicillin-binding protein 5, C-terminal domain VVMO6_02318 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_02322 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02326 SM00642 Alpha-amylase domain VVMO6_02328 SM00354 helix_turn _helix lactose operon repressor VVMO6_02330 SM00382 ATPases associated with a variety of cellular activities VVMO6_02330 SM00930 VVMO6_02330 VVMO6_02336 SM00028 Tetratricopeptide repeats VVMO6_02337 SM00267 diguanylate cyclase VVMO6_02339 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VVMO6_02339 SM00475 5'-3' exonuclease VVMO6_02340 SM00477 DNA/RNA non-specific endonuclease VVMO6_02340 SM00892 DNA/RNA non-specific endonuclease VVMO6_02348 SM00981 VVMO6_02348 VVMO6_02353 SM00861 Transketolase, pyrimidine binding domain VVMO6_02363 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VVMO6_02374 SM01211 VVMO6_02374 VVMO6_02375 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_02378 SM00829 Enoylreductase VVMO6_02384 SM00271 DnaJ molecular chaperone homology domain VVMO6_02400 SM00530 Helix-turn-helix XRE-family like proteins VVMO6_02401 SM00563 Phosphate acyltransferases VVMO6_02417 SM00495 Chitin-binding domain type 3 VVMO6_02419 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02419 SM01240 VVMO6_02419 VVMO6_02422 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_02422 SM00267 diguanylate cyclase VVMO6_02424 SM00173 Ras subfamily of RAS small GTPases VVMO6_02424 SM00382 ATPases associated with a variety of cellular activities VVMO6_02425 SM00564 beta-propeller repeat VVMO6_02431 SM00562 VVMO6_02431 VVMO6_02436 SM00271 DnaJ molecular chaperone homology domain VVMO6_02447 SM01323 VVMO6_02447 VVMO6_02450 SM00020 Trypsin-like serine protease VVMO6_02451 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02464 SM00382 ATPases associated with a variety of cellular activities VVMO6_02470 SM00091 PAS domain VVMO6_02470 SM00387 Histidine kinase-like ATPases VVMO6_02470 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02471 SM00448 cheY-homologous receiver domain VVMO6_02471 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02477 SM00382 ATPases associated with a variety of cellular activities VVMO6_02477 SM01086 C-terminal, D2-small domain, of ClpB protein VVMO6_02479 SM00363 S4 RNA-binding domain VVMO6_02483 SM00830 Chorismate mutase type II VVMO6_02487 SM00382 ATPases associated with a variety of cellular activities VVMO6_02490 SM00830 Chorismate mutase type II VVMO6_02499 SM00448 cheY-homologous receiver domain VVMO6_02499 SM00850 LytTr DNA-binding domain VVMO6_02504 SM00904 Riboflavin kinase VVMO6_02507 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VVMO6_02510 SM01154 VVMO6_02510 VVMO6_02516 SM00927 DNA mismatch repair enzyme MutH VVMO6_02521 SM00382 ATPases associated with a variety of cellular activities VVMO6_02523 SM00937 VVMO6_02523 VVMO6_02531 SM00487 DEAD-like helicases superfamily VVMO6_02531 SM00490 helicase superfamily c-terminal domain VVMO6_02537 SM00986 Uracil DNA glycosylase superfamily VVMO6_02537 SM00987 UreE urease accessory protein, C-terminal domain VVMO6_02538 SM00518 AP endonuclease family 2 VVMO6_02546 SM00448 cheY-homologous receiver domain VVMO6_02546 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02548 SM00073 Histidine Phosphotransfer domain VVMO6_02548 SM00091 PAS domain VVMO6_02548 SM00387 Histidine kinase-like ATPases VVMO6_02548 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02548 SM00448 cheY-homologous receiver domain VVMO6_02550 SM00091 PAS domain VVMO6_02550 SM00267 diguanylate cyclase VVMO6_02551 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_02564 SM00851 MGS-like domain VVMO6_02564 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VVMO6_02565 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VVMO6_02568 SM00957 SecA DEAD-like domain VVMO6_02568 SM00958 SecA preprotein cross-linking domain VVMO6_02572 SM00864 Tubulin/FtsZ family, GTPase domain VVMO6_02572 SM00865 Tubulin/FtsZ family, C-terminal domain VVMO6_02573 SM00842 Cell division protein FtsA VVMO6_02590 SM00749 bacterial OsmY and nodulation domain VVMO6_02600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VVMO6_02601 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VVMO6_02602 SM00434 DNA Topoisomerase IV VVMO6_02603 SM00387 Histidine kinase-like ATPases VVMO6_02603 SM00433 TopoisomeraseII VVMO6_02611 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_02614 SM00880 VVMO6_02614 VVMO6_02614 SM01118 VVMO6_02614 VVMO6_02617 SM00287 Bacterial SH3 domain homologues VVMO6_02618 SM00382 ATPases associated with a variety of cellular activities VVMO6_02622 SM00905 Dihydroneopterin aldolase VVMO6_02623 SM01207 VVMO6_02623 VVMO6_02628 SM00400 zinc finger VVMO6_02628 SM00493 VVMO6_02628 VVMO6_02628 SM00766 DNA primase DnaG DnaB-binding VVMO6_02631 SM00563 Phosphate acyltransferases VVMO6_02637 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_02637 SM01134 VVMO6_02637 VVMO6_02639 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_02639 SM00895 VVMO6_02639 VVMO6_02641 SM00091 PAS domain VVMO6_02641 SM00267 diguanylate cyclase VVMO6_02647 SM00014 Acid phosphatase homologues VVMO6_02650 SM00917 LeuA allosteric (dimerisation) domain VVMO6_02651 SM01329 VVMO6_02651 VVMO6_02655 SM00271 DnaJ molecular chaperone homology domain VVMO6_02659 SM00650 Ribosomal RNA adenine dimethylases VVMO6_02674 SM00563 Phosphate acyltransferases VVMO6_02681 SM00382 ATPases associated with a variety of cellular activities VVMO6_02683 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02687 SM00382 ATPases associated with a variety of cellular activities VVMO6_02693 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02693 SM00924 MgtE intracellular N domain VVMO6_02696 SM00382 ATPases associated with a variety of cellular activities VVMO6_02713 SM00382 ATPases associated with a variety of cellular activities VVMO6_02730 SM00662 RNA polymerases D VVMO6_02731 SM00363 S4 RNA-binding domain VVMO6_02731 SM01390 VVMO6_02731 VVMO6_02744 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VVMO6_02745 SM01374 VVMO6_02745 VVMO6_02749 SM00322 K homology RNA-binding domain VVMO6_02752 SM01382 VVMO6_02752 VVMO6_02752 SM01383 VVMO6_02752 VVMO6_02756 SM01403 VVMO6_02756 VVMO6_02757 SM01276 VVMO6_02757 VVMO6_02759 SM00849 Metallo-beta-lactamase superfamily VVMO6_02759 SM01027 Beta-Casp domain VVMO6_02763 SM00984 UDP binding domain VVMO6_02776 SM00984 UDP binding domain VVMO6_02779 SM00226 Low molecular weight phosphatase family VVMO6_02800 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_02817 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VVMO6_02817 SM01232 VVMO6_02817 VVMO6_02822 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_02822 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02822 SM01049 VVMO6_02822 VVMO6_02832 SM00382 ATPases associated with a variety of cellular activities VVMO6_02833 SM00382 ATPases associated with a variety of cellular activities VVMO6_02843 SM00028 Tetratricopeptide repeats VVMO6_02844 SM00072 Guanylate kinase homologues. VVMO6_02845 SM01409 VVMO6_02845 VVMO6_02846 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_02846 SM00954 Region found in RelA / SpoT proteins VVMO6_02848 SM00487 DEAD-like helicases superfamily VVMO6_02848 SM00490 helicase superfamily c-terminal domain VVMO6_02850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02850 SM00387 Histidine kinase-like ATPases VVMO6_02850 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02851 SM00448 cheY-homologous receiver domain VVMO6_02851 SM00862 Transcriptional regulatory protein, C terminal VVMO6_02853 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_02853 SM00732 Likely ribonuclease with RNase H fold. VVMO6_02870 SM00382 ATPases associated with a variety of cellular activities VVMO6_02873 SM00363 S4 RNA-binding domain VVMO6_02883 SM01230 VVMO6_02883 VVMO6_02885 SM00091 PAS domain VVMO6_02885 SM00387 Histidine kinase-like ATPases VVMO6_02885 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02886 SM00382 ATPases associated with a variety of cellular activities VVMO6_02886 SM00448 cheY-homologous receiver domain VVMO6_02887 SM00052 Putative diguanylate phosphodiesterase VVMO6_02887 SM00267 diguanylate cyclase VVMO6_02887 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_02888 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_02895 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VVMO6_02895 SM00474 3'-5' exonuclease VVMO6_02895 SM00475 5'-3' exonuclease VVMO6_02895 SM00482 DNA polymerase A domain VVMO6_02896 SM01004 Delta-aminolevulinic acid dehydratase VVMO6_02916 SM00357 Cold shock protein domain VVMO6_02916 SM00382 ATPases associated with a variety of cellular activities VVMO6_02916 SM00959 Rho termination factor, N-terminal domain VVMO6_02918 SM00487 DEAD-like helicases superfamily VVMO6_02918 SM00490 helicase superfamily c-terminal domain VVMO6_02922 SM00341 Helicase and RNase D C-terminal VVMO6_02922 SM00487 DEAD-like helicases superfamily VVMO6_02922 SM00490 helicase superfamily c-terminal domain VVMO6_02922 SM00956 VVMO6_02922 VVMO6_02924 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_02937 SM00876 Biotin and Thiamin Synthesis associated domain VVMO6_02955 SM00829 Enoylreductase VVMO6_02965 SM00052 Putative diguanylate phosphodiesterase VVMO6_02965 SM00267 diguanylate cyclase VVMO6_02965 SM01079 VVMO6_02965 VVMO6_02967 SM00387 Histidine kinase-like ATPases VVMO6_02967 SM00433 TopoisomeraseII VVMO6_02969 SM00480 DNA polymerase III beta subunit VVMO6_02970 SM00382 ATPases associated with a variety of cellular activities VVMO6_02970 SM00760 Bacterial dnaA protein helix-turn-helix domain VVMO6_02972 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_02974 SM00382 ATPases associated with a variety of cellular activities VVMO6_02977 SM01234 VVMO6_02977 VVMO6_02983 SM00382 ATPases associated with a variety of cellular activities VVMO6_02984 SM00382 ATPases associated with a variety of cellular activities VVMO6_02989 SM00387 Histidine kinase-like ATPases VVMO6_02989 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_02989 SM00448 cheY-homologous receiver domain VVMO6_02995 SM00382 ATPases associated with a variety of cellular activities VVMO6_02999 SM00387 Histidine kinase-like ATPases VVMO6_03000 SM00448 cheY-homologous receiver domain VVMO6_03000 SM00850 LytTr DNA-binding domain VVMO6_03001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03001 SM01049 VVMO6_03001 VVMO6_03009 SM01154 VVMO6_03009 VVMO6_03015 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03015 SM01009 AlkA N-terminal domain VVMO6_03025 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VVMO6_03025 SM00495 Chitin-binding domain type 3 VVMO6_03025 SM00636 VVMO6_03025 VVMO6_03030 SM00267 diguanylate cyclase VVMO6_03031 SM00267 diguanylate cyclase VVMO6_03032 SM00642 Alpha-amylase domain VVMO6_03037 SM00642 Alpha-amylase domain VVMO6_03038 SM00671 Sel1-like repeats. VVMO6_03055 SM00421 helix_turn_helix, Lux Regulon VVMO6_03058 SM00642 Alpha-amylase domain VVMO6_03059 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03059 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03059 SM01358 VVMO6_03059 VVMO6_03060 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_03062 SM00344 helix_turn_helix ASNC type VVMO6_03065 SM00495 Chitin-binding domain type 3 VVMO6_03068 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03068 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03070 SM00052 Putative diguanylate phosphodiesterase VVMO6_03073 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_03083 SM00387 Histidine kinase-like ATPases VVMO6_03083 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03084 SM00448 cheY-homologous receiver domain VVMO6_03084 SM00862 Transcriptional regulatory protein, C terminal VVMO6_03086 SM00822 VVMO6_03086 VVMO6_03087 SM01236 VVMO6_03087 VVMO6_03089 SM00267 diguanylate cyclase VVMO6_03094 SM00354 helix_turn _helix lactose operon repressor VVMO6_03099 SM00382 ATPases associated with a variety of cellular activities VVMO6_03100 SM00354 helix_turn _helix lactose operon repressor VVMO6_03106 SM00382 ATPases associated with a variety of cellular activities VVMO6_03107 SM00382 ATPases associated with a variety of cellular activities VVMO6_03109 SM00354 helix_turn _helix lactose operon repressor VVMO6_03114 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03115 SM01217 VVMO6_03115 VVMO6_03128 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_03128 SM00267 diguanylate cyclase VVMO6_03132 SM00354 helix_turn _helix lactose operon repressor VVMO6_03134 SM00382 ATPases associated with a variety of cellular activities VVMO6_03137 SM01038 Beta galactosidase small chain VVMO6_03145 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03145 SM00871 Bacterial transcription activator, effector binding domain VVMO6_03151 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03155 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_03161 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_03173 SM00357 Cold shock protein domain VVMO6_03188 SM00849 Metallo-beta-lactamase superfamily VVMO6_03192 SM00421 helix_turn_helix, Lux Regulon VVMO6_03197 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_03199 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_03199 SM00267 diguanylate cyclase VVMO6_03201 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_03203 SM00642 Alpha-amylase domain VVMO6_03208 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03208 SM00387 Histidine kinase-like ATPases VVMO6_03208 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03209 SM00448 cheY-homologous receiver domain VVMO6_03209 SM00862 Transcriptional regulatory protein, C terminal VVMO6_03224 SM00014 Acid phosphatase homologues VVMO6_03229 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03238 SM00267 diguanylate cyclase VVMO6_03238 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03243 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_03245 SM00481 DNA polymerase alpha chain like domain VVMO6_03248 SM00248 ankyrin repeats VVMO6_03249 SM01060 VVMO6_03249 VVMO6_03259 SM00829 Enoylreductase VVMO6_03276 SM00849 Metallo-beta-lactamase superfamily VVMO6_03281 SM00421 helix_turn_helix, Lux Regulon VVMO6_03281 SM00448 cheY-homologous receiver domain VVMO6_03282 SM00267 diguanylate cyclase VVMO6_03283 SM00421 helix_turn_helix, Lux Regulon VVMO6_03283 SM00448 cheY-homologous receiver domain VVMO6_03284 SM00052 Putative diguanylate phosphodiesterase VVMO6_03284 SM00448 cheY-homologous receiver domain VVMO6_03285 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_03285 SM00387 Histidine kinase-like ATPases VVMO6_03285 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03285 SM00448 cheY-homologous receiver domain VVMO6_03288 SM00382 ATPases associated with a variety of cellular activities VVMO6_03293 SM01057 Eukaryotic-type carbonic anhydrase VVMO6_03296 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03296 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VVMO6_03300 SM00245 tail specific protease VVMO6_03303 SM00382 ATPases associated with a variety of cellular activities VVMO6_03307 SM00267 diguanylate cyclase VVMO6_03308 SM00028 Tetratricopeptide repeats VVMO6_03312 SM00422 helix_turn_helix, mercury resistance VVMO6_03314 SM00257 Lysin motif VVMO6_03316 SM00487 DEAD-like helicases superfamily VVMO6_03316 SM00490 helicase superfamily c-terminal domain VVMO6_03322 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03322 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03324 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03328 SM00382 ATPases associated with a variety of cellular activities VVMO6_03329 SM00267 diguanylate cyclase VVMO6_03331 SM00028 Tetratricopeptide repeats VVMO6_03331 SM00327 von Willebrand factor (vWF) type A domain VVMO6_03332 SM00327 von Willebrand factor (vWF) type A domain VVMO6_03336 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03336 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03338 SM00421 helix_turn_helix, Lux Regulon VVMO6_03339 SM00421 helix_turn_helix, Lux Regulon VVMO6_03341 SM00382 ATPases associated with a variety of cellular activities VVMO6_03352 SM00382 ATPases associated with a variety of cellular activities VVMO6_03360 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03363 SM00267 diguanylate cyclase VVMO6_03375 SM00382 ATPases associated with a variety of cellular activities VVMO6_03382 SM00729 Elongator protein 3, MiaB family, Radical SAM VVMO6_03386 SM00260 Two component signalling adaptor domain VVMO6_03386 SM00448 cheY-homologous receiver domain VVMO6_03389 SM00642 Alpha-amylase domain VVMO6_03390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03392 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03392 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03411 SM00267 diguanylate cyclase VVMO6_03411 SM01079 VVMO6_03411 VVMO6_03412 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03412 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03415 SM00267 diguanylate cyclase VVMO6_03418 SM01266 VVMO6_03418 VVMO6_03423 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03428 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03428 SM00871 Bacterial transcription activator, effector binding domain VVMO6_03434 SM00382 ATPases associated with a variety of cellular activities VVMO6_03436 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_03436 SM00866 VVMO6_03436 VVMO6_03447 SM00936 Penicillin-binding protein 5, C-terminal domain VVMO6_03451 SM00028 Tetratricopeptide repeats VVMO6_03457 SM00382 ATPases associated with a variety of cellular activities VVMO6_03475 SM00450 Rhodanese Homology Domain VVMO6_03492 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03492 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03497 SM01022 VVMO6_03497 VVMO6_03498 SM00014 Acid phosphatase homologues VVMO6_03505 SM00382 ATPases associated with a variety of cellular activities VVMO6_03506 SM00327 von Willebrand factor (vWF) type A domain VVMO6_03511 SM00382 ATPases associated with a variety of cellular activities VVMO6_03515 SM00354 helix_turn _helix lactose operon repressor VVMO6_03517 SM00260 Two component signalling adaptor domain VVMO6_03517 SM00448 cheY-homologous receiver domain VVMO6_03521 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VVMO6_03521 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03526 SM00091 PAS domain VVMO6_03526 SM00387 Histidine kinase-like ATPases VVMO6_03526 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03526 SM00448 cheY-homologous receiver domain VVMO6_03527 SM00448 cheY-homologous receiver domain VVMO6_03527 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_03545 SM00327 von Willebrand factor (vWF) type A domain VVMO6_03550 SM01311 VVMO6_03550 VVMO6_03554 SM00493 VVMO6_03554 VVMO6_03554 SM00778 Zinc-binding domain of primase-helicase VVMO6_03555 SM00482 DNA polymerase A domain VVMO6_03600 SM00091 PAS domain VVMO6_03600 SM00387 Histidine kinase-like ATPases VVMO6_03601 SM00448 cheY-homologous receiver domain VVMO6_03602 SM01266 VVMO6_03602 VVMO6_03609 SM00382 ATPases associated with a variety of cellular activities VVMO6_03611 SM00422 helix_turn_helix, mercury resistance VVMO6_03619 SM00851 MGS-like domain VVMO6_03621 SM00073 Histidine Phosphotransfer domain VVMO6_03621 SM00387 Histidine kinase-like ATPases VVMO6_03621 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03621 SM00448 cheY-homologous receiver domain VVMO6_03633 SM00487 DEAD-like helicases superfamily VVMO6_03633 SM00490 helicase superfamily c-terminal domain VVMO6_03634 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_03634 SM00387 Histidine kinase-like ATPases VVMO6_03634 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03634 SM00448 cheY-homologous receiver domain VVMO6_03635 SM00052 Putative diguanylate phosphodiesterase VVMO6_03635 SM00421 helix_turn_helix, Lux Regulon VVMO6_03635 SM00448 cheY-homologous receiver domain VVMO6_03636 SM00448 cheY-homologous receiver domain VVMO6_03638 SM00052 Putative diguanylate phosphodiesterase VVMO6_03638 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_03638 SM00267 diguanylate cyclase VVMO6_03639 SM00635 Bacterial Ig-like domain 2 VVMO6_03642 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03643 SM00316 Ribosomal protein S1-like RNA-binding domain VVMO6_03643 SM00357 Cold shock protein domain VVMO6_03643 SM00955 VVMO6_03643 VVMO6_03644 SM00487 DEAD-like helicases superfamily VVMO6_03644 SM00490 helicase superfamily c-terminal domain VVMO6_03654 SM00327 von Willebrand factor (vWF) type A domain VVMO6_03661 SM00028 Tetratricopeptide repeats VVMO6_03662 SM00990 VVMO6_03662 VVMO6_03677 SM00382 ATPases associated with a variety of cellular activities VVMO6_03689 SM00530 Helix-turn-helix XRE-family like proteins VVMO6_03691 SM00020 Trypsin-like serine protease VVMO6_03701 SM00354 helix_turn _helix lactose operon repressor VVMO6_03705 SM00052 Putative diguanylate phosphodiesterase VVMO6_03709 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03709 SM00387 Histidine kinase-like ATPases VVMO6_03709 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03710 SM00448 cheY-homologous receiver domain VVMO6_03712 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03713 SM00495 Chitin-binding domain type 3 VVMO6_03713 SM00636 VVMO6_03713 VVMO6_03719 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_03721 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03724 SM00487 DEAD-like helicases superfamily VVMO6_03724 SM00490 helicase superfamily c-terminal domain VVMO6_03725 SM00052 Putative diguanylate phosphodiesterase VVMO6_03728 SM00867 YceI-like domain VVMO6_03729 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_03739 SM00782 PhnA Zinc-Ribbon VVMO6_03748 SM00642 Alpha-amylase domain VVMO6_03753 SM00271 DnaJ molecular chaperone homology domain VVMO6_03757 SM00052 Putative diguanylate phosphodiesterase VVMO6_03757 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VVMO6_03757 SM00267 diguanylate cyclase VVMO6_03760 SM00382 ATPases associated with a variety of cellular activities VVMO6_03763 SM00797 Allophanate hydrolase subunit 2 VVMO6_03764 SM00796 Allophanate hydrolase subunit 1 VVMO6_03767 SM00091 PAS domain VVMO6_03767 SM00267 diguanylate cyclase VVMO6_03770 SM00881 CoA binding domain VVMO6_03794 SM00448 cheY-homologous receiver domain VVMO6_03794 SM00862 Transcriptional regulatory protein, C terminal VVMO6_03795 SM00387 Histidine kinase-like ATPases VVMO6_03795 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03797 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VVMO6_03797 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VVMO6_03800 SM00267 diguanylate cyclase VVMO6_03802 SM00267 diguanylate cyclase VVMO6_03802 SM00448 cheY-homologous receiver domain VVMO6_03804 SM00347 helix_turn_helix multiple antibiotic resistance protein VVMO6_03806 SM00382 ATPases associated with a variety of cellular activities VVMO6_03814 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03814 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03822 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VVMO6_03824 SM00450 Rhodanese Homology Domain VVMO6_03830 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_03834 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03834 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03834 SM01049 VVMO6_03834 VVMO6_03836 SM00028 Tetratricopeptide repeats VVMO6_03848 SM00091 PAS domain VVMO6_03848 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03853 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03853 SM00387 Histidine kinase-like ATPases VVMO6_03853 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_03853 SM00448 cheY-homologous receiver domain VVMO6_03854 SM00138 Methyltransferase, chemotaxis proteins VVMO6_03856 SM00267 diguanylate cyclase VVMO6_03856 SM00448 cheY-homologous receiver domain VVMO6_03859 SM00487 DEAD-like helicases superfamily VVMO6_03859 SM00490 helicase superfamily c-terminal domain VVMO6_03861 SM00833 Cobalamin synthesis protein cobW C-terminal domain VVMO6_03863 SM00028 Tetratricopeptide repeats VVMO6_03863 SM00267 diguanylate cyclase VVMO6_03867 SM00382 ATPases associated with a variety of cellular activities VVMO6_03870 SM01012 VVMO6_03870 VVMO6_03874 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_03877 SM00642 Alpha-amylase domain VVMO6_03878 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03878 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03879 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03879 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03881 SM00458 Ricin-type beta-trefoil VVMO6_03900 SM00382 ATPases associated with a variety of cellular activities VVMO6_03900 SM01086 C-terminal, D2-small domain, of ClpB protein VVMO6_03909 SM00331 Sigma factor PP2C-like phosphatases VVMO6_03909 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VVMO6_03915 SM00240 Forkhead associated domain VVMO6_03916 SM00220 Serine/Threonine protein kinases, catalytic domain VVMO6_03923 SM00052 Putative diguanylate phosphodiesterase VVMO6_03923 SM00267 diguanylate cyclase VVMO6_03934 SM00387 Histidine kinase-like ATPases VVMO6_03935 SM00448 cheY-homologous receiver domain VVMO6_03935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_03939 SM00861 Transketolase, pyrimidine binding domain VVMO6_03941 SM00893 Electron transfer flavoprotein domain VVMO6_03942 SM00893 Electron transfer flavoprotein domain VVMO6_03945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_03946 SM01005 Alanine racemase, C-terminal domain VVMO6_03950 SM00382 ATPases associated with a variety of cellular activities VVMO6_03952 SM00382 ATPases associated with a variety of cellular activities VVMO6_03953 SM00822 VVMO6_03953 VVMO6_03960 SM00422 helix_turn_helix, mercury resistance VVMO6_03968 SM00357 Cold shock protein domain VVMO6_03972 SM00829 Enoylreductase VVMO6_03976 SM00421 helix_turn_helix, Lux Regulon VVMO6_03976 SM00448 cheY-homologous receiver domain VVMO6_03977 SM00387 Histidine kinase-like ATPases VVMO6_03981 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_03981 SM00267 diguanylate cyclase VVMO6_03984 SM00357 Cold shock protein domain VVMO6_03985 SM01322 VVMO6_03985 VVMO6_03992 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_03992 SM01358 VVMO6_03992 VVMO6_04006 SM00852 Probable molybdopterin binding domain VVMO6_04009 SM00450 Rhodanese Homology Domain VVMO6_04010 SM00052 Putative diguanylate phosphodiesterase VVMO6_04010 SM00267 diguanylate cyclase VVMO6_04011 SM00636 VVMO6_04011 VVMO6_04014 SM00861 Transketolase, pyrimidine binding domain VVMO6_04015 SM00052 Putative diguanylate phosphodiesterase VVMO6_04016 SM00091 PAS domain VVMO6_04016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04031 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04035 SM00347 helix_turn_helix multiple antibiotic resistance protein VVMO6_04040 SM00052 Putative diguanylate phosphodiesterase VVMO6_04040 SM00267 diguanylate cyclase VVMO6_04047 SM00052 Putative diguanylate phosphodiesterase VVMO6_04047 SM00267 diguanylate cyclase VVMO6_04054 SM01119 VVMO6_04054 VVMO6_04057 SM00382 ATPases associated with a variety of cellular activities VVMO6_04065 SM00347 helix_turn_helix multiple antibiotic resistance protein VVMO6_04068 SM00487 DEAD-like helicases superfamily VVMO6_04068 SM00490 helicase superfamily c-terminal domain VVMO6_04085 SM01240 VVMO6_04085 VVMO6_04090 SM00448 cheY-homologous receiver domain VVMO6_04092 SM00421 helix_turn_helix, Lux Regulon VVMO6_04092 SM00448 cheY-homologous receiver domain VVMO6_04093 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04093 SM00387 Histidine kinase-like ATPases VVMO6_04096 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VVMO6_04103 SM01130 VVMO6_04103 VVMO6_04115 SM00822 VVMO6_04115 VVMO6_04121 SM00344 helix_turn_helix ASNC type VVMO6_04124 SM00387 Histidine kinase-like ATPases VVMO6_04124 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04124 SM00448 cheY-homologous receiver domain VVMO6_04132 SM00387 Histidine kinase-like ATPases VVMO6_04132 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04132 SM00448 cheY-homologous receiver domain VVMO6_04135 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VVMO6_04138 SM00788 Adenylosuccinate synthetase VVMO6_04144 SM00344 helix_turn_helix ASNC type VVMO6_04148 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_04150 SM00387 Histidine kinase-like ATPases VVMO6_04150 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04151 SM00448 cheY-homologous receiver domain VVMO6_04151 SM00862 Transcriptional regulatory protein, C terminal VVMO6_04153 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04156 SM00924 MgtE intracellular N domain VVMO6_04157 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04157 SM00871 Bacterial transcription activator, effector binding domain VVMO6_04162 SM00382 ATPases associated with a variety of cellular activities VVMO6_04172 SM00327 von Willebrand factor (vWF) type A domain VVMO6_04172 SM00609 Vault protein Inter-alpha-Trypsin domain VVMO6_04173 SM00563 Phosphate acyltransferases VVMO6_04177 SM00849 Metallo-beta-lactamase superfamily VVMO6_04179 SM00052 Putative diguanylate phosphodiesterase VVMO6_04184 SM00382 ATPases associated with a variety of cellular activities VVMO6_04185 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_04189 SM00495 Chitin-binding domain type 3 VVMO6_04190 SM00052 Putative diguanylate phosphodiesterase VVMO6_04192 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_04193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04194 SM00062 Bacterial periplasmic substrate-binding proteins VVMO6_04198 SM00823 Phosphopantetheine attachment site VVMO6_04207 SM00830 Chorismate mutase type II VVMO6_04216 SM00849 Metallo-beta-lactamase superfamily VVMO6_04224 SM00382 ATPases associated with a variety of cellular activities VVMO6_04227 SM00354 helix_turn _helix lactose operon repressor VVMO6_04235 SM01091 Transporter associated domain VVMO6_04238 SM00382 ATPases associated with a variety of cellular activities VVMO6_04240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VVMO6_04240 SM00091 PAS domain VVMO6_04240 SM00267 diguanylate cyclase VVMO6_04245 SM00421 helix_turn_helix, Lux Regulon VVMO6_04252 SM00849 Metallo-beta-lactamase superfamily VVMO6_04253 SM00028 Tetratricopeptide repeats VVMO6_04260 SM00052 Putative diguanylate phosphodiesterase VVMO6_04276 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VVMO6_04288 SM00642 Alpha-amylase domain VVMO6_04307 SM00346 helix_turn_helix isocitrate lyase regulation VVMO6_04308 SM00116 Domain in cystathionine beta-synthase and other proteins. VVMO6_04309 SM00479 VVMO6_04309 VVMO6_04323 SM00387 Histidine kinase-like ATPases VVMO6_04323 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04323 SM00448 cheY-homologous receiver domain VVMO6_04326 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04328 SM00422 helix_turn_helix, mercury resistance VVMO6_04331 SM00448 cheY-homologous receiver domain VVMO6_04331 SM00862 Transcriptional regulatory protein, C terminal VVMO6_04332 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04332 SM00387 Histidine kinase-like ATPases VVMO6_04335 SM00267 diguanylate cyclase VVMO6_04335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04337 SM00838 Elongation factor G C-terminus VVMO6_04337 SM00889 Elongation factor G, domain IV VVMO6_04346 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04361 SM00487 DEAD-like helicases superfamily VVMO6_04361 SM00490 helicase superfamily c-terminal domain VVMO6_04372 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04372 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04373 SM00073 Histidine Phosphotransfer domain VVMO6_04373 SM00091 PAS domain VVMO6_04373 SM00387 Histidine kinase-like ATPases VVMO6_04373 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04373 SM00448 cheY-homologous receiver domain VVMO6_04374 SM00448 cheY-homologous receiver domain VVMO6_04374 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VVMO6_04379 SM00382 ATPases associated with a variety of cellular activities VVMO6_04379 SM00448 cheY-homologous receiver domain VVMO6_04380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VVMO6_04380 SM00387 Histidine kinase-like ATPases VVMO6_04382 SM00849 Metallo-beta-lactamase superfamily VVMO6_04384 SM00448 cheY-homologous receiver domain VVMO6_04384 SM00862 Transcriptional regulatory protein, C terminal VVMO6_04385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04385 SM00387 Histidine kinase-like ATPases VVMO6_04385 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04392 SM00267 diguanylate cyclase VVMO6_04396 SM00479 VVMO6_04396 VVMO6_04397 SM00382 ATPases associated with a variety of cellular activities VVMO6_04404 SM00382 ATPases associated with a variety of cellular activities VVMO6_04407 SM00895 VVMO6_04407 VVMO6_04409 SM00382 ATPases associated with a variety of cellular activities VVMO6_04418 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_04418 SM01134 VVMO6_04418 VVMO6_04419 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_04419 SM01134 VVMO6_04419 VVMO6_04421 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04425 SM00849 Metallo-beta-lactamase superfamily VVMO6_04429 SM00671 Sel1-like repeats. VVMO6_04435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04439 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04444 SM00829 Enoylreductase VVMO6_04445 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04452 SM00354 helix_turn _helix lactose operon repressor VVMO6_04455 SM00487 DEAD-like helicases superfamily VVMO6_04455 SM00490 helicase superfamily c-terminal domain VVMO6_04457 SM00345 helix_turn_helix gluconate operon transcriptional repressor VVMO6_04457 SM00895 VVMO6_04457 VVMO6_04471 SM00420 helix_turn_helix, Deoxyribose operon repressor VVMO6_04471 SM01134 VVMO6_04471 VVMO6_04474 SM01007 Class II Aldolase and Adducin N-terminal domain VVMO6_04476 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VVMO6_04480 SM00382 ATPases associated with a variety of cellular activities VVMO6_04491 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04491 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04492 SM00382 ATPases associated with a variety of cellular activities VVMO6_04504 SM00344 helix_turn_helix ASNC type VVMO6_04510 SM00342 helix_turn_helix, arabinose operon control protein VVMO6_04512 SM00421 helix_turn_helix, Lux Regulon VVMO6_04514 SM00387 Histidine kinase-like ATPases VVMO6_04514 SM00388 His Kinase A (phosphoacceptor) domain VVMO6_04515 SM00448 cheY-homologous receiver domain VVMO6_04518 SM00052 Putative diguanylate phosphodiesterase VVMO6_04518 SM00267 diguanylate cyclase VVMO6_04519 SM00382 ATPases associated with a variety of cellular activities VVMO6_04523 SM00883 Chaperonin 10 Kd subunit VVMO6_04524 SM01266 VVMO6_04524 VVMO6_04525 SM00028 Tetratricopeptide repeats VVMO6_04533 SM00855 Phosphoglycerate mutase family VVMO6_04548 SM00331 Sigma factor PP2C-like phosphatases VVMO6_04548 SM00448 cheY-homologous receiver domain VVMO6_04550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04551 SM00448 cheY-homologous receiver domain VVMO6_04553 SM00138 Methyltransferase, chemotaxis proteins VVMO6_04554 SM00091 PAS domain VVMO6_04554 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VVMO6_04554 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VVMO6_04555 SM00260 Two component signalling adaptor domain VVMO6_04556 SM00260 Two component signalling adaptor domain VVMO6_04557 SM00073 Histidine Phosphotransfer domain VVMO6_04557 SM00260 Two component signalling adaptor domain VVMO6_04557 SM00387 Histidine kinase-like ATPases VVMO6_04557 SM01231 VVMO6_04557 VVMO6_04558 SM00448 cheY-homologous receiver domain VVMO6_04561 SM00470 ParB-like nuclease domain