AOT11_00025	PWY-6655	xanthan biosynthesis
AOT11_00025	PWY-6658	acetan biosynthesis
AOT11_00220	PWY-4202	arsenate detoxification I (glutaredoxin)
AOT11_00220	PWY-5532	adenosine nucleotides degradation IV
AOT11_00220	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_00220	PWY-6608	guanosine nucleotides degradation III
AOT11_00220	PWY-6609	adenine and adenosine salvage III
AOT11_00220	PWY-6611	adenine and adenosine salvage V
AOT11_00220	PWY-6620	guanine and guanosine salvage
AOT11_00220	PWY-6627	salinosporamide A biosynthesis
AOT11_00220	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AOT11_00220	PWY-7179	purine deoxyribonucleosides degradation I
AOT11_00220	PWY-7179-1	purine deoxyribonucleosides degradation
AOT11_00305	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AOT11_00305	PWY-5743	3-hydroxypropanoate cycle
AOT11_00305	PWY-5744	glyoxylate assimilation
AOT11_00305	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_00305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_00305	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_00305	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_00430	PWY-7378	aminopropanol phosphate biosynthesis II
AOT11_00495	PWY-6854	ethylene biosynthesis III (microbes)
AOT11_00640	PWY-6910	hydroxymethylpyrimidine salvage
AOT11_00640	PWY-7356	thiamin salvage IV (yeast)
AOT11_00640	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AOT11_00670	PWY-6167	flavin biosynthesis II (archaea)
AOT11_00670	PWY-6168	flavin biosynthesis III (fungi)
AOT11_00730	PWY-7039	phosphatidate metabolism, as a signaling molecule
AOT11_00730	PWY-7817	AOT11_00730
AOT11_00875	PWY-4983	L-citrulline-nitric oxide cycle
AOT11_00875	PWY-4984	urea cycle
AOT11_00875	PWY-5	canavanine biosynthesis
AOT11_00875	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_00875	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_00945	PWY-4202	arsenate detoxification I (glutaredoxin)
AOT11_00945	PWY-5532	adenosine nucleotides degradation IV
AOT11_00945	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_00945	PWY-6608	guanosine nucleotides degradation III
AOT11_00945	PWY-6609	adenine and adenosine salvage III
AOT11_00945	PWY-6611	adenine and adenosine salvage V
AOT11_00945	PWY-6620	guanine and guanosine salvage
AOT11_00945	PWY-6627	salinosporamide A biosynthesis
AOT11_00945	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AOT11_00945	PWY-7179	purine deoxyribonucleosides degradation I
AOT11_00945	PWY-7179-1	purine deoxyribonucleosides degradation
AOT11_00950	PWY-3861	mannitol degradation II
AOT11_00950	PWY-3881	mannitol biosynthesis
AOT11_00950	PWY-5659	GDP-mannose biosynthesis
AOT11_00950	PWY-6992	1,5-anhydrofructose degradation
AOT11_00950	PWY-7456	mannan degradation
AOT11_00950	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AOT11_00950	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AOT11_00975	PWY-1881	formate oxidation to CO<sub>2</sub>
AOT11_00975	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_00975	PWY-6696	oxalate degradation III
AOT11_00975	PWY-7985	AOT11_00975
AOT11_01040	PWY-3861	mannitol degradation II
AOT11_01040	PWY-3881	mannitol biosynthesis
AOT11_01040	PWY-5659	GDP-mannose biosynthesis
AOT11_01040	PWY-6992	1,5-anhydrofructose degradation
AOT11_01040	PWY-7456	mannan degradation
AOT11_01040	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AOT11_01040	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AOT11_01110	PWY-6527	stachyose degradation
AOT11_01120	PWY-6807	xyloglucan degradation II (exoglucanase)
AOT11_01280	PWY-3121	linamarin degradation
AOT11_01280	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AOT11_01280	PWY-6002	lotaustralin degradation
AOT11_01280	PWY-6788	cellulose degradation II (fungi)
AOT11_01280	PWY-7091	linustatin bioactivation
AOT11_01280	PWY-7092	neolinustatin bioactivation
AOT11_01280	PWY-7913	AOT11_01280
AOT11_01345	PWY-5386	methylglyoxal degradation I
AOT11_01400	PWY-7942	AOT11_01400
AOT11_01430	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AOT11_01430	PWY-622	starch biosynthesis
AOT11_01430	PWY-7900	AOT11_01430
AOT11_01435	PWY-5941	glycogen degradation II (eukaryotic)
AOT11_01435	PWY-6724	starch degradation II
AOT11_01435	PWY-6737	starch degradation V
AOT11_01435	PWY-7238	sucrose biosynthesis II
AOT11_01440	PWY-5941	glycogen degradation II (eukaryotic)
AOT11_01440	PWY-6731	starch degradation III
AOT11_01440	PWY-6737	starch degradation V
AOT11_01440	PWY-7238	sucrose biosynthesis II
AOT11_01555	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AOT11_01555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_01565	PWY-46	putrescine biosynthesis III
AOT11_01565	PWY-6305	putrescine biosynthesis IV
AOT11_01600	PWY-5941	glycogen degradation II (eukaryotic)
AOT11_01600	PWY-6724	starch degradation II
AOT11_01600	PWY-6737	starch degradation V
AOT11_01600	PWY-7238	sucrose biosynthesis II
AOT11_01640	PWY-5532	adenosine nucleotides degradation IV
AOT11_01640	PWY-7181	pyrimidine deoxyribonucleosides degradation
AOT11_01650	PWY-6855	chitin degradation I (archaea)
AOT11_01650	PWY-6902	chitin degradation II
AOT11_01650	PWY-7822	AOT11_01650
AOT11_01675	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AOT11_01715	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AOT11_01715	PWY-6855	chitin degradation I (archaea)
AOT11_01715	PWY-6906	chitin derivatives degradation
AOT11_01800	PWY-6168	flavin biosynthesis III (fungi)
AOT11_01800	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_01800	PWY-7991	AOT11_01800
AOT11_02050	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AOT11_02050	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_02065	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AOT11_02065	PWY-6853	ethylene biosynthesis II (microbes)
AOT11_02065	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AOT11_02105	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AOT11_02110	PWY-5686	UMP biosynthesis
AOT11_02110	PWY-7790	AOT11_02110
AOT11_02110	PWY-7791	AOT11_02110
AOT11_02175	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_02175	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AOT11_02175	PWY-7242	D-fructuronate degradation
AOT11_02175	PWY-7310	D-glucosaminate degradation
AOT11_02175	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AOT11_02185	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
AOT11_02185	PWY-7248	pectin degradation III
AOT11_02190	PWY-6531	mannitol cycle
AOT11_02215	PWY-7242	D-fructuronate degradation
AOT11_02455	PWY-6906	chitin derivatives degradation
AOT11_02455	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AOT11_02455	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AOT11_02460	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AOT11_02460	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AOT11_02560	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AOT11_02560	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AOT11_02560	PWY-6936	seleno-amino acid biosynthesis
AOT11_02560	PWY-702	L-methionine biosynthesis II
AOT11_02935	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AOT11_02935	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AOT11_02995	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_02995	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AOT11_02995	PWY-6638	sulfolactate degradation III
AOT11_02995	PWY-6642	(<i>R</i>)-cysteate degradation
AOT11_02995	PWY-6643	coenzyme M biosynthesis II
AOT11_02995	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_02995	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_02995	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_03000	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AOT11_03000	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_03035	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_03035	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AOT11_03035	PWY-7242	D-fructuronate degradation
AOT11_03035	PWY-7310	D-glucosaminate degradation
AOT11_03035	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AOT11_03295	PWY-3461	L-tyrosine biosynthesis II
AOT11_03295	PWY-3462	L-phenylalanine biosynthesis II
AOT11_03295	PWY-6120	L-tyrosine biosynthesis III
AOT11_03295	PWY-6406	salicylate biosynthesis I
AOT11_03295	PWY-6627	salinosporamide A biosynthesis
AOT11_03295	PWY-7626	bacilysin biosynthesis
AOT11_03315	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_03315	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AOT11_03315	PWY-6406	salicylate biosynthesis I
AOT11_03320	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AOT11_03325	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_03325	PWY-6164	3-dehydroquinate biosynthesis I
AOT11_03325	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_03340	PWY-6012	acyl carrier protein metabolism I
AOT11_03340	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AOT11_03340	PWY-6289	petrobactin biosynthesis
AOT11_03380	PWY-6788	cellulose degradation II (fungi)
AOT11_03385	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AOT11_03385	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_03605	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_03620	PWY-1042	glycolysis IV (plant cytosol)
AOT11_03620	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_03620	PWY-6901	superpathway of glucose and xylose degradation
AOT11_03620	PWY-7003	glycerol degradation to butanol
AOT11_03720	PWY-3861	mannitol degradation II
AOT11_03720	PWY-3881	mannitol biosynthesis
AOT11_03720	PWY-5659	GDP-mannose biosynthesis
AOT11_03720	PWY-6992	1,5-anhydrofructose degradation
AOT11_03720	PWY-7456	mannan degradation
AOT11_03720	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AOT11_03720	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AOT11_03810	PWY-5676	acetyl-CoA fermentation to butanoate II
AOT11_03810	PWY-5741	ethylmalonyl-CoA pathway
AOT11_03810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AOT11_03810	PWY-7948	AOT11_03810
AOT11_03845	PWY-5674	nitrate reduction IV (dissimilatory)
AOT11_03880	PWY-6938	NADH repair
AOT11_03955	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_03955	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_03955	PWY-6863	pyruvate fermentation to hexanol
AOT11_03955	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_03955	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_03955	PWY-6948	sitosterol degradation to androstenedione
AOT11_03955	PWY-7094	fatty acid salvage
AOT11_03955	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AOT11_03955	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AOT11_03955	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AOT11_03955	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AOT11_03955	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AOT11_03955	PWY-735	jasmonic acid biosynthesis
AOT11_03955	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_03955	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_03955	PWY-7726	AOT11_03955
AOT11_03960	PWY-1361	benzoyl-CoA degradation I (aerobic)
AOT11_03960	PWY-5109	2-methylbutanoate biosynthesis
AOT11_03960	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_03960	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AOT11_03960	PWY-5177	glutaryl-CoA degradation
AOT11_03960	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_03960	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_03960	PWY-6583	pyruvate fermentation to butanol I
AOT11_03960	PWY-6863	pyruvate fermentation to hexanol
AOT11_03960	PWY-6883	pyruvate fermentation to butanol II
AOT11_03960	PWY-6944	androstenedione degradation
AOT11_03960	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_03960	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_03960	PWY-7007	methyl ketone biosynthesis
AOT11_03960	PWY-7046	4-coumarate degradation (anaerobic)
AOT11_03960	PWY-7094	fatty acid salvage
AOT11_03960	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AOT11_03960	PWY-735	jasmonic acid biosynthesis
AOT11_03960	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AOT11_03960	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_03960	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_03960	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AOT11_03960	PWY-7726	AOT11_03960
AOT11_03960	PWY-7778	AOT11_03960
AOT11_03960	PWY-7779	AOT11_03960
AOT11_04110	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_04130	PWY-6902	chitin degradation II
AOT11_04130	PWY-7822	AOT11_04130
AOT11_04130	PWY-7883	AOT11_04130
AOT11_04235	PWY-6749	CMP-legionaminate biosynthesis I
AOT11_04245	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_04245	PWY-4521	arsenite oxidation I (respiratory)
AOT11_04245	PWY-6692	Fe(II) oxidation
AOT11_04245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_04290	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_04290	PWY-6164	3-dehydroquinate biosynthesis I
AOT11_04290	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_04310	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_04310	PWY-5723	Rubisco shunt
AOT11_04310	PWY-6891	thiazole biosynthesis II (Bacillus)
AOT11_04310	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_04310	PWY-6901	superpathway of glucose and xylose degradation
AOT11_04310	PWY-7560	methylerythritol phosphate pathway II
AOT11_04315	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_04315	PWY-5723	Rubisco shunt
AOT11_04325	PWY-6855	chitin degradation I (archaea)
AOT11_04325	PWY-6902	chitin degradation II
AOT11_04325	PWY-7822	AOT11_04325
AOT11_04340	PWY-6823	molybdenum cofactor biosynthesis
AOT11_04345	PWY-6823	molybdenum cofactor biosynthesis
AOT11_04350	PWY-5663	tetrahydrobiopterin biosynthesis I
AOT11_04350	PWY-5664	tetrahydrobiopterin biosynthesis II
AOT11_04350	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AOT11_04350	PWY-6703	preQ<sub>0</sub> biosynthesis
AOT11_04350	PWY-6983	tetrahydrobiopterin biosynthesis III
AOT11_04350	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AOT11_04350	PWY-7852	AOT11_04350
AOT11_04390	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_04470	PWY-3861	mannitol degradation II
AOT11_04470	PWY-3881	mannitol biosynthesis
AOT11_04470	PWY-5659	GDP-mannose biosynthesis
AOT11_04470	PWY-6992	1,5-anhydrofructose degradation
AOT11_04470	PWY-7456	mannan degradation
AOT11_04470	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AOT11_04470	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AOT11_04540	PWY-5074	mevalonate degradation
AOT11_04550	PWY-4381	fatty acid biosynthesis initiation I
AOT11_04550	PWY-5743	3-hydroxypropanoate cycle
AOT11_04550	PWY-5744	glyoxylate assimilation
AOT11_04550	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_04550	PWY-6722	candicidin biosynthesis
AOT11_04570	PWY-5642	2,4-dinitrotoluene degradation
AOT11_04650	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_04690	PWY-6609	adenine and adenosine salvage III
AOT11_04690	PWY-6611	adenine and adenosine salvage V
AOT11_04690	PWY-7179	purine deoxyribonucleosides degradation I
AOT11_04690	PWY-7179-1	purine deoxyribonucleosides degradation
AOT11_04745	PWY-6134	L-tyrosine biosynthesis IV
AOT11_04745	PWY-7158	L-phenylalanine degradation V
AOT11_04750	PWY-7158	L-phenylalanine degradation V
AOT11_05005	PWY-5194	siroheme biosynthesis
AOT11_05005	PWY-5196	factor 430 biosynthesis
AOT11_05005	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AOT11_05040	PWY-6683	sulfate reduction III (assimilatory)
AOT11_05135	PWY-6683	sulfate reduction III (assimilatory)
AOT11_05150	PWY-5194	siroheme biosynthesis
AOT11_05150	PWY-5196	factor 430 biosynthesis
AOT11_05150	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AOT11_05235	PWY-4381	fatty acid biosynthesis initiation I
AOT11_05290	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_05290	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_05290	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_05300	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_05300	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AOT11_05300	PWY-6638	sulfolactate degradation III
AOT11_05300	PWY-6642	(<i>R</i>)-cysteate degradation
AOT11_05300	PWY-6643	coenzyme M biosynthesis II
AOT11_05300	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_05300	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_05300	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_05420	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_05420	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_05420	PWY-7953	AOT11_05420
AOT11_05430	PWY-5392	reductive TCA cycle II
AOT11_05430	PWY-5537	pyruvate fermentation to acetate V
AOT11_05430	PWY-5538	pyruvate fermentation to acetate VI
AOT11_05430	PWY-5690	TCA cycle II (plants and fungi)
AOT11_05430	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_05430	PWY-6728	methylaspartate cycle
AOT11_05430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_05430	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_05455	PWY-4041	&gamma;-glutamyl cycle
AOT11_05455	PWY-7942	AOT11_05455
AOT11_05490	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_05490	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_05490	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_05490	PWY-6113	superpathway of mycolate biosynthesis
AOT11_05490	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_05490	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_05490	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_05490	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_05490	PWY-7858	AOT11_05490
AOT11_05490	PWYG-321	mycolate biosynthesis
AOT11_05655	PWY-6012	acyl carrier protein metabolism I
AOT11_05690	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AOT11_05690	PWY-2161	folate polyglutamylation
AOT11_05690	PWY-2201	folate transformations I
AOT11_05690	PWY-3841	folate transformations II
AOT11_05695	PWY-622	starch biosynthesis
AOT11_05695	PWY-7902	AOT11_05695
AOT11_05700	PWY-6855	chitin degradation I (archaea)
AOT11_05700	PWY-6902	chitin degradation II
AOT11_05700	PWY-7822	AOT11_05700
AOT11_05735	PWY-1042	glycolysis IV (plant cytosol)
AOT11_05735	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_05735	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_05735	PWY-5723	Rubisco shunt
AOT11_05735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_05735	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_05735	PWY-6901	superpathway of glucose and xylose degradation
AOT11_05735	PWY-7003	glycerol degradation to butanol
AOT11_05735	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AOT11_05735	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_05820	PWY-1622	formaldehyde assimilation I (serine pathway)
AOT11_05820	PWY-181	photorespiration
AOT11_05820	PWY-2161	folate polyglutamylation
AOT11_05820	PWY-2201	folate transformations I
AOT11_05820	PWY-3661	glycine betaine degradation I
AOT11_05820	PWY-3661-1	glycine betaine degradation II (mammalian)
AOT11_05820	PWY-3841	folate transformations II
AOT11_05820	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_05965	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AOT11_05965	PWY-5491	diethylphosphate degradation
AOT11_06025	PWY-5482	pyruvate fermentation to acetate II
AOT11_06025	PWY-5485	pyruvate fermentation to acetate IV
AOT11_06025	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_06180	PWY-6174	mevalonate pathway II (archaea)
AOT11_06180	PWY-7391	isoprene biosynthesis II (engineered)
AOT11_06180	PWY-7524	mevalonate pathway III (archaea)
AOT11_06180	PWY-922	mevalonate pathway I
AOT11_06375	PWY-5987	sorgoleone biosynthesis
AOT11_06375	PWY-5996	oleate biosynthesis II (animals and fungi)
AOT11_06625	PWY-4261	glycerol degradation I
AOT11_06625	PWY-6118	glycerol-3-phosphate shuttle
AOT11_06625	PWY-6952	glycerophosphodiester degradation
AOT11_06630	PWY-4261	glycerol degradation I
AOT11_06630	PWY-6118	glycerol-3-phosphate shuttle
AOT11_06630	PWY-6952	glycerophosphodiester degradation
AOT11_06655	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_06655	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_06680	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AOT11_06680	PWY-7494	choline degradation IV
AOT11_06685	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AOT11_06685	PWY-7494	choline degradation IV
AOT11_06710	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_06710	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_06780	PWY-6832	2-aminoethylphosphonate degradation II
AOT11_06865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_06865	PWY-7118	chitin degradation to ethanol
AOT11_06865	PWY-7294	xylose degradation IV
AOT11_06865	PWY-7295	L-arabinose degradation IV
AOT11_06865	PWY-7854	AOT11_06865
AOT11_07005	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AOT11_07005	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_07095	PWY-5963	thio-molybdenum cofactor biosynthesis
AOT11_07100	PWY-5686	UMP biosynthesis
AOT11_07100	PWY-7790	AOT11_07100
AOT11_07100	PWY-7791	AOT11_07100
AOT11_07165	PWY-6655	xanthan biosynthesis
AOT11_07165	PWY-6658	acetan biosynthesis
AOT11_07260	PWY-6703	preQ<sub>0</sub> biosynthesis
AOT11_07265	PWY-6703	preQ<sub>0</sub> biosynthesis
AOT11_07295	PWY-5108	L-isoleucine biosynthesis V
AOT11_07295	PWY-5132	humulone biosynthesis
AOT11_07295	PWY-5133	cohumulone biosynthesis
AOT11_07295	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AOT11_07295	PWY-7118	chitin degradation to ethanol
AOT11_07295	PWY-7857	AOT11_07295
AOT11_07315	PWY-5747	2-methylcitrate cycle II
AOT11_07405	PWY-5506	methanol oxidation to formaldehyde IV
AOT11_07560	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AOT11_07560	PWY-6269	adenosylcobalamin salvage from cobinamide II
AOT11_07560	PWY-7961	AOT11_07560
AOT11_07560	PWY-7963	AOT11_07560
AOT11_07560	PWY-7964	AOT11_07560
AOT11_07560	PWY-7965	AOT11_07560
AOT11_07560	PWY-7966	AOT11_07560
AOT11_07560	PWY-7967	AOT11_07560
AOT11_07560	PWY-7968	AOT11_07560
AOT11_07560	PWY-7969	AOT11_07560
AOT11_07560	PWY-7970	AOT11_07560
AOT11_07560	PWY-7975	AOT11_07560
AOT11_07565	PWY-6269	adenosylcobalamin salvage from cobinamide II
AOT11_07565	PWY-7962	AOT11_07565
AOT11_07565	PWY-7971	AOT11_07565
AOT11_07565	PWY-7972	AOT11_07565
AOT11_07570	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AOT11_07570	PWY-6269	adenosylcobalamin salvage from cobinamide II
AOT11_07570	PWY-7961	AOT11_07570
AOT11_07570	PWY-7963	AOT11_07570
AOT11_07570	PWY-7964	AOT11_07570
AOT11_07570	PWY-7965	AOT11_07570
AOT11_07570	PWY-7966	AOT11_07570
AOT11_07570	PWY-7967	AOT11_07570
AOT11_07570	PWY-7968	AOT11_07570
AOT11_07570	PWY-7969	AOT11_07570
AOT11_07570	PWY-7970	AOT11_07570
AOT11_07570	PWY-7975	AOT11_07570
AOT11_07575	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AOT11_07575	PWY-6269	adenosylcobalamin salvage from cobinamide II
AOT11_07575	PWY-7964	AOT11_07575
AOT11_07575	PWY-7965	AOT11_07575
AOT11_07575	PWY-7966	AOT11_07575
AOT11_07575	PWY-7967	AOT11_07575
AOT11_07575	PWY-7968	AOT11_07575
AOT11_07575	PWY-7969	AOT11_07575
AOT11_07575	PWY-7970	AOT11_07575
AOT11_07605	PWY-6123	inosine-5'-phosphate biosynthesis I
AOT11_07605	PWY-6124	inosine-5'-phosphate biosynthesis II
AOT11_07605	PWY-7234	inosine-5'-phosphate biosynthesis III
AOT11_07615	PWY-6803	phosphatidylcholine acyl editing
AOT11_07615	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AOT11_07615	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AOT11_07615	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AOT11_07615	PWY-7783	AOT11_07615
AOT11_07625	PWY-6339	syringate degradation
AOT11_07725	PWY-5155	&beta;-alanine biosynthesis III
AOT11_07760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_07760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_07760	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_07760	PWY-6113	superpathway of mycolate biosynthesis
AOT11_07760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_07760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_07760	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_07760	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_07760	PWY-7858	AOT11_07760
AOT11_07760	PWYG-321	mycolate biosynthesis
AOT11_07765	PWY-7094	fatty acid salvage
AOT11_07765	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_08015	PWY-7805	AOT11_08015
AOT11_08015	PWY-7807	AOT11_08015
AOT11_08025	PWY-6527	stachyose degradation
AOT11_08100	PWY-7199	pyrimidine deoxyribonucleosides salvage
AOT11_08190	PWY-7887	AOT11_08190
AOT11_08190	PWY-7892	AOT11_08190
AOT11_08200	PWY-6123	inosine-5'-phosphate biosynthesis I
AOT11_08200	PWY-6124	inosine-5'-phosphate biosynthesis II
AOT11_08200	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_08200	PWY-7234	inosine-5'-phosphate biosynthesis III
AOT11_08250	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AOT11_08255	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_08260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_08260	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AOT11_08260	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AOT11_08265	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AOT11_08275	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AOT11_08360	PWY-5686	UMP biosynthesis
AOT11_08360	PWY-7790	AOT11_08360
AOT11_08360	PWY-7791	AOT11_08360
AOT11_08385	PWY-7205	CMP phosphorylation
AOT11_08425	PWY-1042	glycolysis IV (plant cytosol)
AOT11_08425	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_08425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_08425	PWY-5723	Rubisco shunt
AOT11_08425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_08425	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_08425	PWY-6901	superpathway of glucose and xylose degradation
AOT11_08425	PWY-7003	glycerol degradation to butanol
AOT11_08425	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AOT11_08425	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_08465	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AOT11_08465	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_08465	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_08465	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AOT11_08465	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AOT11_08465	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_08475	PWY-6543	4-aminobenzoate biosynthesis
AOT11_08490	PWY-5367	petroselinate biosynthesis
AOT11_08490	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_08490	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_08490	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_08490	PWY-5994	palmitate biosynthesis I (animals and fungi)
AOT11_08490	PWY-6113	superpathway of mycolate biosynthesis
AOT11_08490	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_08490	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_08490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_08490	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_08490	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_08490	PWY-7858	AOT11_08490
AOT11_08490	PWYG-321	mycolate biosynthesis
AOT11_08495	PWY-4381	fatty acid biosynthesis initiation I
AOT11_08495	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AOT11_08495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_08500	PWY-4381	fatty acid biosynthesis initiation I
AOT11_08555	PWY-7193	pyrimidine ribonucleosides salvage I
AOT11_08600	PWY-5674	nitrate reduction IV (dissimilatory)
AOT11_08625	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AOT11_08625	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AOT11_08625	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AOT11_08625	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AOT11_08625	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AOT11_08625	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AOT11_08625	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AOT11_08625	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AOT11_08625	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AOT11_08625	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AOT11_08630	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AOT11_08630	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_08630	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AOT11_08630	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_08630	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_08630	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_08630	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_08630	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AOT11_08635	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AOT11_08635	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_08635	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AOT11_08635	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_08635	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_08635	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_08635	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_08635	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AOT11_08660	PWY-6562	norspermidine biosynthesis
AOT11_08670	PWY-6409	pyoverdine I biosynthesis
AOT11_08670	PWY-6562	norspermidine biosynthesis
AOT11_08670	PWY-761	rhizobactin 1021 biosynthesis
AOT11_08670	PWY-7855	AOT11_08670
AOT11_08670	PWY-7988	AOT11_08670
AOT11_08695	PWY-5269	cardiolipin biosynthesis II
AOT11_08695	PWY-5668	cardiolipin biosynthesis I
AOT11_08695	PWY-7817	AOT11_08695
AOT11_08760	PWY-5958	acridone alkaloid biosynthesis
AOT11_08760	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AOT11_08760	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AOT11_08765	PWY-5958	acridone alkaloid biosynthesis
AOT11_08765	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AOT11_08765	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AOT11_08850	PWY-6823	molybdenum cofactor biosynthesis
AOT11_08850	PWY-7887	AOT11_08850
AOT11_08860	PWY-6823	molybdenum cofactor biosynthesis
AOT11_08870	PWY-6823	molybdenum cofactor biosynthesis
AOT11_08940	PWY-5386	methylglyoxal degradation I
AOT11_08975	PWY-6854	ethylene biosynthesis III (microbes)
AOT11_08995	PWY-3162	L-tryptophan degradation V (side chain pathway)
AOT11_08995	PWY-5057	L-valine degradation II
AOT11_08995	PWY-5076	L-leucine degradation III
AOT11_08995	PWY-5078	L-isoleucine degradation II
AOT11_08995	PWY-5079	L-phenylalanine degradation III
AOT11_08995	PWY-5082	L-methionine degradation III
AOT11_08995	PWY-5480	pyruvate fermentation to ethanol I
AOT11_08995	PWY-5486	pyruvate fermentation to ethanol II
AOT11_08995	PWY-5751	phenylethanol biosynthesis
AOT11_08995	PWY-6313	serotonin degradation
AOT11_08995	PWY-6333	acetaldehyde biosynthesis I
AOT11_08995	PWY-6342	noradrenaline and adrenaline degradation
AOT11_08995	PWY-6587	pyruvate fermentation to ethanol III
AOT11_08995	PWY-6802	salidroside biosynthesis
AOT11_08995	PWY-6871	3-methylbutanol biosynthesis
AOT11_08995	PWY-7013	L-1,2-propanediol degradation
AOT11_08995	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_08995	PWY-7118	chitin degradation to ethanol
AOT11_08995	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AOT11_09015	PWY-2941	L-lysine biosynthesis II
AOT11_09015	PWY-2942	L-lysine biosynthesis III
AOT11_09015	PWY-5097	L-lysine biosynthesis VI
AOT11_09015	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_09015	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_09015	PWY-6559	spermidine biosynthesis II
AOT11_09015	PWY-6562	norspermidine biosynthesis
AOT11_09015	PWY-7153	grixazone biosynthesis
AOT11_09015	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_09015	PWY-7977	AOT11_09015
AOT11_09130	PWY-1042	glycolysis IV (plant cytosol)
AOT11_09130	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_09130	PWY-6901	superpathway of glucose and xylose degradation
AOT11_09130	PWY-7003	glycerol degradation to butanol
AOT11_09435	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09440	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09445	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09450	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09455	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09460	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AOT11_09460	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AOT11_09460	PWY-6406	salicylate biosynthesis I
AOT11_09650	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_09650	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_09650	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_09650	PWY-5994	palmitate biosynthesis I (animals and fungi)
AOT11_09650	PWY-6113	superpathway of mycolate biosynthesis
AOT11_09650	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_09650	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_09650	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_09650	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_09650	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_09650	PWY-7858	AOT11_09650
AOT11_09650	PWYG-321	mycolate biosynthesis
AOT11_09695	PWY-5367	petroselinate biosynthesis
AOT11_09695	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_09695	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_09695	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_09695	PWY-5994	palmitate biosynthesis I (animals and fungi)
AOT11_09695	PWY-6113	superpathway of mycolate biosynthesis
AOT11_09695	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_09695	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_09695	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_09695	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_09695	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_09695	PWY-7858	AOT11_09695
AOT11_09695	PWYG-321	mycolate biosynthesis
AOT11_09800	PWY-2201	folate transformations I
AOT11_09800	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_09800	PWY-7909	AOT11_09800
AOT11_09855	PWY-5392	reductive TCA cycle II
AOT11_09855	PWY-5537	pyruvate fermentation to acetate V
AOT11_09855	PWY-5538	pyruvate fermentation to acetate VI
AOT11_09855	PWY-5690	TCA cycle II (plants and fungi)
AOT11_09855	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_09855	PWY-6728	methylaspartate cycle
AOT11_09855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_09855	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_09860	PWY-5392	reductive TCA cycle II
AOT11_09860	PWY-5537	pyruvate fermentation to acetate V
AOT11_09860	PWY-5538	pyruvate fermentation to acetate VI
AOT11_09860	PWY-5690	TCA cycle II (plants and fungi)
AOT11_09860	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_09860	PWY-6728	methylaspartate cycle
AOT11_09860	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_09860	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_09865	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AOT11_09870	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AOT11_09875	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_09875	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AOT11_09875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_09875	PWY-5690	TCA cycle II (plants and fungi)
AOT11_09875	PWY-6728	methylaspartate cycle
AOT11_09875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_09875	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_09875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_09880	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_09880	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AOT11_09880	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_09880	PWY-5690	TCA cycle II (plants and fungi)
AOT11_09880	PWY-6728	methylaspartate cycle
AOT11_09880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_09880	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_09880	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_09930	PWY-2723	trehalose degradation V
AOT11_09930	PWY-3801	sucrose degradation II (sucrose synthase)
AOT11_09930	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AOT11_09930	PWY-5661	GDP-glucose biosynthesis
AOT11_09930	PWY-5940	streptomycin biosynthesis
AOT11_09930	PWY-5941	glycogen degradation II (eukaryotic)
AOT11_09930	PWY-622	starch biosynthesis
AOT11_09930	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_09930	PWY-6731	starch degradation III
AOT11_09930	PWY-6737	starch degradation V
AOT11_09930	PWY-6749	CMP-legionaminate biosynthesis I
AOT11_09930	PWY-6981	chitin biosynthesis
AOT11_09930	PWY-7238	sucrose biosynthesis II
AOT11_09930	PWY-7343	UDP-glucose biosynthesis
AOT11_09930	PWY-7900	AOT11_09930
AOT11_09930	PWY-7902	AOT11_09930
AOT11_09975	PWY-6906	chitin derivatives degradation
AOT11_09975	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AOT11_09975	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AOT11_10015	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_10120	PWY-6936	seleno-amino acid biosynthesis
AOT11_10260	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_10285	PWY-6902	chitin degradation II
AOT11_10285	PWY-7822	AOT11_10285
AOT11_10285	PWY-7883	AOT11_10285
AOT11_10325	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_10325	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_10350	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_10360	PWY-7560	methylerythritol phosphate pathway II
AOT11_10370	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AOT11_10515	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_10515	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_10520	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_10520	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AOT11_10520	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_10520	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_10530	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_10530	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_10540	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AOT11_10540	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AOT11_10545	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AOT11_10545	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AOT11_10555	PWY-1622	formaldehyde assimilation I (serine pathway)
AOT11_10555	PWY-181	photorespiration
AOT11_10555	PWY-2161	folate polyglutamylation
AOT11_10555	PWY-2201	folate transformations I
AOT11_10555	PWY-3661	glycine betaine degradation I
AOT11_10555	PWY-3661-1	glycine betaine degradation II (mammalian)
AOT11_10555	PWY-3841	folate transformations II
AOT11_10555	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_10630	PWY-6700	queuosine biosynthesis
AOT11_10645	PWY-6617	adenosine nucleotides degradation III
AOT11_10645	PWY-7569	arginomycin biosynthesis
AOT11_10645	PWY-7570	blasticidin S biosynthesis
AOT11_10705	PWY-6891	thiazole biosynthesis II (Bacillus)
AOT11_10705	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_10705	PWY-7560	methylerythritol phosphate pathway II
AOT11_10710	PWY-5269	cardiolipin biosynthesis II
AOT11_10710	PWY-5668	cardiolipin biosynthesis I
AOT11_10710	PWY-7817	AOT11_10710
AOT11_10715	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AOT11_10715	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AOT11_10715	PWY-6896	thiamin salvage I
AOT11_10715	PWY-6897	thiamin salvage II
AOT11_10725	PWY-6167	flavin biosynthesis II (archaea)
AOT11_10725	PWY-6168	flavin biosynthesis III (fungi)
AOT11_10730	PWY-6167	flavin biosynthesis II (archaea)
AOT11_10730	PWY-6168	flavin biosynthesis III (fungi)
AOT11_10730	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_10730	PWY-7991	AOT11_10730
AOT11_10735	PWY-6167	flavin biosynthesis II (archaea)
AOT11_10735	PWY-6168	flavin biosynthesis III (fungi)
AOT11_10735	PWY-7980	AOT11_10735
AOT11_10740	PWY-7991	AOT11_10740
AOT11_10750	PWY-3341	L-proline biosynthesis III
AOT11_10750	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AOT11_10755	PWY-3341	L-proline biosynthesis III
AOT11_10755	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AOT11_10805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AOT11_10805	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AOT11_10805	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AOT11_10825	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AOT11_10825	PWY-3162	L-tryptophan degradation V (side chain pathway)
AOT11_10825	PWY-5057	L-valine degradation II
AOT11_10825	PWY-5076	L-leucine degradation III
AOT11_10825	PWY-5078	L-isoleucine degradation II
AOT11_10825	PWY-5079	L-phenylalanine degradation III
AOT11_10825	PWY-5082	L-methionine degradation III
AOT11_10825	PWY-5480	pyruvate fermentation to ethanol I
AOT11_10825	PWY-5486	pyruvate fermentation to ethanol II
AOT11_10825	PWY-5751	phenylethanol biosynthesis
AOT11_10825	PWY-6313	serotonin degradation
AOT11_10825	PWY-6333	acetaldehyde biosynthesis I
AOT11_10825	PWY-6342	noradrenaline and adrenaline degradation
AOT11_10825	PWY-6587	pyruvate fermentation to ethanol III
AOT11_10825	PWY-6802	salidroside biosynthesis
AOT11_10825	PWY-6871	3-methylbutanol biosynthesis
AOT11_10825	PWY-7013	L-1,2-propanediol degradation
AOT11_10825	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_10825	PWY-7118	chitin degradation to ethanol
AOT11_10825	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AOT11_10825	PWY-7798	AOT11_10825
AOT11_10830	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AOT11_10910	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AOT11_10910	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AOT11_10910	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AOT11_11020	PWY-6855	chitin degradation I (archaea)
AOT11_11020	PWY-6902	chitin degradation II
AOT11_11020	PWY-7822	AOT11_11020
AOT11_11025	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_11030	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_11030	PWY-6596	adenosine nucleotides degradation I
AOT11_11030	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_11090	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AOT11_11090	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AOT11_11090	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_11090	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_11090	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AOT11_11090	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AOT11_11090	PWY-7205	CMP phosphorylation
AOT11_11090	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_11090	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_11090	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_11090	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_11090	PWY-7224	purine deoxyribonucleosides salvage
AOT11_11090	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_11090	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AOT11_11130	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AOT11_11145	PWY-2301	<i>myo</i>-inositol biosynthesis
AOT11_11145	PWY-4702	phytate degradation I
AOT11_11145	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AOT11_11165	PWY-6700	queuosine biosynthesis
AOT11_11170	PWY-6700	queuosine biosynthesis
AOT11_11185	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_11190	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_11190	PWY-7118	chitin degradation to ethanol
AOT11_11190	PWY-7294	xylose degradation IV
AOT11_11190	PWY-7295	L-arabinose degradation IV
AOT11_11190	PWY-7854	AOT11_11190
AOT11_11335	PWY-3461	L-tyrosine biosynthesis II
AOT11_11335	PWY-3462	L-phenylalanine biosynthesis II
AOT11_11335	PWY-6120	L-tyrosine biosynthesis III
AOT11_11335	PWY-6627	salinosporamide A biosynthesis
AOT11_11335	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AOT11_11335	PWY-7626	bacilysin biosynthesis
AOT11_11370	PWY-3461	L-tyrosine biosynthesis II
AOT11_11370	PWY-3462	L-phenylalanine biosynthesis II
AOT11_11370	PWY-6120	L-tyrosine biosynthesis III
AOT11_11370	PWY-6627	salinosporamide A biosynthesis
AOT11_11370	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AOT11_11370	PWY-7626	bacilysin biosynthesis
AOT11_11375	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_11375	PWY-6164	3-dehydroquinate biosynthesis I
AOT11_11375	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_11380	PWY-6902	chitin degradation II
AOT11_11380	PWY-7822	AOT11_11380
AOT11_11380	PWY-7883	AOT11_11380
AOT11_11385	PWY-7883	AOT11_11385
AOT11_11420	PWY-7560	methylerythritol phosphate pathway II
AOT11_11430	PWY-7884	AOT11_11430
AOT11_11440	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AOT11_11440	PWY-6167	flavin biosynthesis II (archaea)
AOT11_11440	PWY-6168	flavin biosynthesis III (fungi)
AOT11_11440	PWY-7863	AOT11_11440
AOT11_11545	PWY-3841	folate transformations II
AOT11_11545	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AOT11_11545	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AOT11_11545	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AOT11_11545	PWY-7199	pyrimidine deoxyribonucleosides salvage
AOT11_11545	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AOT11_11635	PWY-7805	AOT11_11635
AOT11_11635	PWY-7807	AOT11_11635
AOT11_11710	PWY-702	L-methionine biosynthesis II
AOT11_11715	PWY-2941	L-lysine biosynthesis II
AOT11_11715	PWY-2942	L-lysine biosynthesis III
AOT11_11715	PWY-5097	L-lysine biosynthesis VI
AOT11_11715	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_11715	PWY-6559	spermidine biosynthesis II
AOT11_11715	PWY-6562	norspermidine biosynthesis
AOT11_11715	PWY-7153	grixazone biosynthesis
AOT11_11715	PWY-7977	AOT11_11715
AOT11_11785	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AOT11_11785	PWY-6153	autoinducer AI-2 biosynthesis I
AOT11_11785	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AOT11_11825	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_11825	PWY-5686	UMP biosynthesis
AOT11_11825	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_11825	PWY-7790	AOT11_11825
AOT11_11825	PWY-7791	AOT11_11825
AOT11_11830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_11830	PWY-5686	UMP biosynthesis
AOT11_11830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_11830	PWY-7790	AOT11_11830
AOT11_11830	PWY-7791	AOT11_11830
AOT11_11835	PWY-2941	L-lysine biosynthesis II
AOT11_11835	PWY-2942	L-lysine biosynthesis III
AOT11_11835	PWY-5097	L-lysine biosynthesis VI
AOT11_11840	PWY-6502	oxidized GTP and dGTP detoxification
AOT11_11875	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_11875	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_11875	PWY-7953	AOT11_11875
AOT11_11880	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_11880	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AOT11_11880	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_11880	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_11885	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_11885	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AOT11_11885	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_11885	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_11890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_11890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_11895	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_11895	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_11895	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_11900	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_11900	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_11900	PWY-7953	AOT11_11900
AOT11_11910	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_11910	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_11940	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AOT11_11970	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_11970	PWY-6692	Fe(II) oxidation
AOT11_11970	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AOT11_11970	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_12090	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AOT11_12095	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AOT11_12095	PWY-6148	tetrahydromethanopterin biosynthesis
AOT11_12095	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AOT11_12095	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_12095	PWY-7852	AOT11_12095
AOT11_12095	PWY-7853	AOT11_12095
AOT11_12100	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AOT11_12100	PWY-6148	tetrahydromethanopterin biosynthesis
AOT11_12100	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AOT11_12100	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_12170	PWY-6749	CMP-legionaminate biosynthesis I
AOT11_12180	PWY-1042	glycolysis IV (plant cytosol)
AOT11_12180	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_12180	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_12180	PWY-5723	Rubisco shunt
AOT11_12180	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_12180	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_12180	PWY-6901	superpathway of glucose and xylose degradation
AOT11_12180	PWY-7003	glycerol degradation to butanol
AOT11_12180	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AOT11_12180	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_12195	PWY-5101	L-isoleucine biosynthesis II
AOT11_12195	PWY-5103	L-isoleucine biosynthesis III
AOT11_12195	PWY-5104	L-isoleucine biosynthesis IV
AOT11_12195	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AOT11_12195	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AOT11_12195	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AOT11_12195	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_12200	PWY-5101	L-isoleucine biosynthesis II
AOT11_12200	PWY-5103	L-isoleucine biosynthesis III
AOT11_12200	PWY-5104	L-isoleucine biosynthesis IV
AOT11_12200	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AOT11_12200	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AOT11_12200	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AOT11_12200	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_12230	PWY-6871	3-methylbutanol biosynthesis
AOT11_12235	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AOT11_12290	PWY-3841	folate transformations II
AOT11_12290	PWY-6614	tetrahydrofolate biosynthesis
AOT11_12325	PWY-1622	formaldehyde assimilation I (serine pathway)
AOT11_12325	PWY-5392	reductive TCA cycle II
AOT11_12325	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_12325	PWY-5690	TCA cycle II (plants and fungi)
AOT11_12325	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_12325	PWY-6728	methylaspartate cycle
AOT11_12325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_12325	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_12325	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_12355	PWY-5667	CDP-diacylglycerol biosynthesis I
AOT11_12355	PWY-5981	CDP-diacylglycerol biosynthesis III
AOT11_12355	PWY-6453	stigma estolide biosynthesis
AOT11_12355	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AOT11_12355	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AOT11_12355	PWY-7587	oleate biosynthesis III (cyanobacteria)
AOT11_12355	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AOT11_12355	PWY-7782	AOT11_12355
AOT11_12360	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_12360	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_12360	PWY-7953	AOT11_12360
AOT11_12405	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_12405	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_12485	PWY-7883	AOT11_12485
AOT11_12490	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_12495	PWY-7805	AOT11_12495
AOT11_12495	PWY-7807	AOT11_12495
AOT11_12565	PWY-5340	sulfate activation for sulfonation
AOT11_12575	PWY-5278	sulfite oxidation III
AOT11_12575	PWY-5340	sulfate activation for sulfonation
AOT11_12575	PWY-6683	sulfate reduction III (assimilatory)
AOT11_12575	PWY-6932	selenate reduction
AOT11_12580	PWY-5278	sulfite oxidation III
AOT11_12580	PWY-5340	sulfate activation for sulfonation
AOT11_12580	PWY-6683	sulfate reduction III (assimilatory)
AOT11_12580	PWY-6932	selenate reduction
AOT11_12585	PWY-5194	siroheme biosynthesis
AOT11_12585	PWY-5196	factor 430 biosynthesis
AOT11_12585	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AOT11_12775	PWY-3801	sucrose degradation II (sucrose synthase)
AOT11_12775	PWY-6527	stachyose degradation
AOT11_12775	PWY-7238	sucrose biosynthesis II
AOT11_12775	PWY-7343	UDP-glucose biosynthesis
AOT11_12775	PWY-7817	AOT11_12775
AOT11_12785	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AOT11_12785	PWY-7820	AOT11_12785
AOT11_12790	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_12790	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_12790	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_12790	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
AOT11_12790	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
AOT11_12790	PWY-7815	AOT11_12790
AOT11_12790	PWY-7816	AOT11_12790
AOT11_12790	PWY-7819	AOT11_12790
AOT11_12790	PWY-7905	AOT11_12790
AOT11_12830	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_12830	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_12830	PWY-7953	AOT11_12830
AOT11_12835	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_12835	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_12835	PWY-7953	AOT11_12835
AOT11_12850	PWY-3221	dTDP-L-rhamnose biosynthesis II
AOT11_12850	PWY-6808	dTDP-D-forosamine biosynthesis
AOT11_12850	PWY-6942	dTDP-D-desosamine biosynthesis
AOT11_12850	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AOT11_12850	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AOT11_12850	PWY-6974	dTDP-L-olivose biosynthesis
AOT11_12850	PWY-6976	dTDP-L-mycarose biosynthesis
AOT11_12850	PWY-7104	dTDP-L-megosamine biosynthesis
AOT11_12850	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AOT11_12850	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AOT11_12850	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AOT11_12850	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AOT11_12850	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AOT11_12850	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AOT11_12850	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AOT11_12850	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AOT11_12850	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AOT11_12850	PWY-7688	AOT11_12850
AOT11_12850	PWY-7814	AOT11_12850
AOT11_12855	PWY-3221	dTDP-L-rhamnose biosynthesis II
AOT11_12855	PWY-6808	dTDP-D-forosamine biosynthesis
AOT11_12855	PWY-6942	dTDP-D-desosamine biosynthesis
AOT11_12855	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AOT11_12855	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AOT11_12855	PWY-6974	dTDP-L-olivose biosynthesis
AOT11_12855	PWY-6976	dTDP-L-mycarose biosynthesis
AOT11_12855	PWY-7104	dTDP-L-megosamine biosynthesis
AOT11_12855	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AOT11_12855	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AOT11_12855	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AOT11_12855	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AOT11_12855	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AOT11_12855	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AOT11_12855	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AOT11_12855	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AOT11_12855	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AOT11_12855	PWY-7688	AOT11_12855
AOT11_12855	PWY-7814	AOT11_12855
AOT11_12925	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AOT11_12945	PWY-6143	CMP-pseudaminate biosynthesis
AOT11_12965	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_12965	PWY-6143	CMP-pseudaminate biosynthesis
AOT11_12975	PWY-6143	CMP-pseudaminate biosynthesis
AOT11_12975	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AOT11_12975	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AOT11_12975	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AOT11_12975	PWY-7719	AOT11_12975
AOT11_13010	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AOT11_13010	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AOT11_13015	PWY-7039	phosphatidate metabolism, as a signaling molecule
AOT11_13015	PWY-7817	AOT11_13015
AOT11_13035	PWY-7851	AOT11_13035
AOT11_13075	PWY-7851	AOT11_13075
AOT11_13090	PWY-5686	UMP biosynthesis
AOT11_13090	PWY-7790	AOT11_13090
AOT11_13090	PWY-7791	AOT11_13090
AOT11_13185	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_13240	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_13335	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_13335	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_13375	PWY-381	nitrate reduction II (assimilatory)
AOT11_13375	PWY-5675	nitrate reduction V (assimilatory)
AOT11_13375	PWY-6549	L-glutamine biosynthesis III
AOT11_13375	PWY-6963	ammonia assimilation cycle I
AOT11_13375	PWY-6964	ammonia assimilation cycle II
AOT11_13400	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AOT11_13435	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_13435	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AOT11_13470	PWY-5839	menaquinol-7 biosynthesis
AOT11_13470	PWY-5844	menaquinol-9 biosynthesis
AOT11_13470	PWY-5849	menaquinol-6 biosynthesis
AOT11_13470	PWY-5890	menaquinol-10 biosynthesis
AOT11_13470	PWY-5891	menaquinol-11 biosynthesis
AOT11_13470	PWY-5892	menaquinol-12 biosynthesis
AOT11_13470	PWY-5895	menaquinol-13 biosynthesis
AOT11_13555	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AOT11_13555	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AOT11_13555	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AOT11_13555	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AOT11_13555	PWY-6978	plastoquinol-9 biosynthesis II
AOT11_13565	PWY-7980	AOT11_13565
AOT11_13660	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_13660	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AOT11_13665	PWY-6891	thiazole biosynthesis II (Bacillus)
AOT11_13665	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_13680	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AOT11_13680	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AOT11_13680	PWY-6897	thiamin salvage II
AOT11_13680	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AOT11_13680	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AOT11_13680	PWY-7356	thiamin salvage IV (yeast)
AOT11_13680	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AOT11_13685	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AOT11_13810	PWY-1361	benzoyl-CoA degradation I (aerobic)
AOT11_13810	PWY-5109	2-methylbutanoate biosynthesis
AOT11_13810	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_13810	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AOT11_13810	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AOT11_13810	PWY-5177	glutaryl-CoA degradation
AOT11_13810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_13810	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_13810	PWY-6583	pyruvate fermentation to butanol I
AOT11_13810	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AOT11_13810	PWY-6863	pyruvate fermentation to hexanol
AOT11_13810	PWY-6883	pyruvate fermentation to butanol II
AOT11_13810	PWY-6944	androstenedione degradation
AOT11_13810	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_13810	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_13810	PWY-7007	methyl ketone biosynthesis
AOT11_13810	PWY-7046	4-coumarate degradation (anaerobic)
AOT11_13810	PWY-7094	fatty acid salvage
AOT11_13810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AOT11_13810	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AOT11_13810	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
AOT11_13810	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
AOT11_13810	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AOT11_13810	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AOT11_13810	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AOT11_13810	PWY-735	jasmonic acid biosynthesis
AOT11_13810	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AOT11_13810	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_13810	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_13810	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AOT11_13810	PWY-7726	AOT11_13810
AOT11_13810	PWY-7778	AOT11_13810
AOT11_13810	PWY-7779	AOT11_13810
AOT11_13815	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_13815	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_13815	PWY-6863	pyruvate fermentation to hexanol
AOT11_13815	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_13815	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_13815	PWY-6948	sitosterol degradation to androstenedione
AOT11_13815	PWY-7094	fatty acid salvage
AOT11_13815	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AOT11_13815	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AOT11_13815	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AOT11_13815	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AOT11_13815	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AOT11_13815	PWY-735	jasmonic acid biosynthesis
AOT11_13815	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_13815	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_13815	PWY-7726	AOT11_13815
AOT11_13985	PWY-7980	AOT11_13985
AOT11_13995	PWY-7980	AOT11_13995
AOT11_14005	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AOT11_14035	PWY-5101	L-isoleucine biosynthesis II
AOT11_14035	PWY-5103	L-isoleucine biosynthesis III
AOT11_14035	PWY-5104	L-isoleucine biosynthesis IV
AOT11_14035	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_14040	PWY-5057	L-valine degradation II
AOT11_14040	PWY-5076	L-leucine degradation III
AOT11_14040	PWY-5078	L-isoleucine degradation II
AOT11_14040	PWY-5101	L-isoleucine biosynthesis II
AOT11_14040	PWY-5103	L-isoleucine biosynthesis III
AOT11_14040	PWY-5104	L-isoleucine biosynthesis IV
AOT11_14040	PWY-5108	L-isoleucine biosynthesis V
AOT11_14040	PWY-7767	AOT11_14040
AOT11_14050	PWY-5101	L-isoleucine biosynthesis II
AOT11_14050	PWY-5103	L-isoleucine biosynthesis III
AOT11_14050	PWY-5104	L-isoleucine biosynthesis IV
AOT11_14050	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AOT11_14050	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AOT11_14050	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AOT11_14050	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_14155	PWY-6123	inosine-5'-phosphate biosynthesis I
AOT11_14155	PWY-7234	inosine-5'-phosphate biosynthesis III
AOT11_14165	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AOT11_14170	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_14220	PWY-5103	L-isoleucine biosynthesis III
AOT11_14220	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_14350	PWY-5101	L-isoleucine biosynthesis II
AOT11_14350	PWY-5103	L-isoleucine biosynthesis III
AOT11_14350	PWY-5104	L-isoleucine biosynthesis IV
AOT11_14350	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AOT11_14355	PWY-5530	sorbitol biosynthesis II
AOT11_14355	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_14365	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_14365	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AOT11_14365	PWY-7242	D-fructuronate degradation
AOT11_14365	PWY-7310	D-glucosaminate degradation
AOT11_14365	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AOT11_14375	PWY-4081	glutathione redox reactions I
AOT11_14445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_14445	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AOT11_14450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_14450	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AOT11_14470	PWY-2941	L-lysine biosynthesis II
AOT11_14470	PWY-2942	L-lysine biosynthesis III
AOT11_14470	PWY-5097	L-lysine biosynthesis VI
AOT11_14475	PWY-2941	L-lysine biosynthesis II
AOT11_14475	PWY-5097	L-lysine biosynthesis VI
AOT11_14540	PWY-1042	glycolysis IV (plant cytosol)
AOT11_14540	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_14540	PWY-6901	superpathway of glucose and xylose degradation
AOT11_14540	PWY-7003	glycerol degradation to butanol
AOT11_14615	PWY-5350	thiosulfate disproportionation III (rhodanese)
AOT11_14615	PWY-7927	AOT11_14615
AOT11_14630	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AOT11_14630	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AOT11_14630	PWY-6148	tetrahydromethanopterin biosynthesis
AOT11_14630	PWY-7742	AOT11_14630
AOT11_14630	PWY-7745	AOT11_14630
AOT11_14630	PWY-7929	AOT11_14630
AOT11_14630	PWY-7934	AOT11_14630
AOT11_14630	PWY-7935	AOT11_14630
AOT11_14640	PWY-5667	CDP-diacylglycerol biosynthesis I
AOT11_14640	PWY-6453	stigma estolide biosynthesis
AOT11_14640	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AOT11_14640	PWY-7587	oleate biosynthesis III (cyanobacteria)
AOT11_14655	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AOT11_14680	PWY-6482	diphthamide biosynthesis (archaea)
AOT11_14680	PWY-7546	diphthamide biosynthesis (eukaryotes)
AOT11_14685	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_14685	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_14775	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AOT11_14775	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AOT11_14775	PWY-7953	AOT11_14775
AOT11_14780	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AOT11_14780	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AOT11_14785	PWY-3961	phosphopantothenate biosynthesis II
AOT11_14860	PWY-5381	pyridine nucleotide cycling (plants)
AOT11_14860	PWY-7761	AOT11_14860
AOT11_14875	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AOT11_14875	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AOT11_14875	PWY-7766	AOT11_14875
AOT11_14915	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AOT11_14915	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AOT11_14915	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AOT11_14920	PWY-6123	inosine-5'-phosphate biosynthesis I
AOT11_14920	PWY-6124	inosine-5'-phosphate biosynthesis II
AOT11_14920	PWY-7234	inosine-5'-phosphate biosynthesis III
AOT11_14960	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_14960	PWY-6416	quinate degradation II
AOT11_14960	PWY-6707	gallate biosynthesis
AOT11_14965	PWY-5108	L-isoleucine biosynthesis V
AOT11_14965	PWY-5132	humulone biosynthesis
AOT11_14965	PWY-5133	cohumulone biosynthesis
AOT11_14965	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AOT11_14965	PWY-7118	chitin degradation to ethanol
AOT11_14965	PWY-7857	AOT11_14965
AOT11_15030	PWY-5392	reductive TCA cycle II
AOT11_15030	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_15030	PWY-5690	TCA cycle II (plants and fungi)
AOT11_15030	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_15030	PWY-6728	methylaspartate cycle
AOT11_15030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_15030	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_15030	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_15045	PWY-6854	ethylene biosynthesis III (microbes)
AOT11_15070	PWY-1042	glycolysis IV (plant cytosol)
AOT11_15070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_15070	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_15070	PWY-7385	1,3-propanediol biosynthesis (engineered)
AOT11_15130	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_15130	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AOT11_15130	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_15130	PWY-5690	TCA cycle II (plants and fungi)
AOT11_15130	PWY-6728	methylaspartate cycle
AOT11_15130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_15130	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_15130	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_15135	PWY-5392	reductive TCA cycle II
AOT11_15135	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_15135	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_15165	PWY-6936	seleno-amino acid biosynthesis
AOT11_15165	PWY-7274	D-cycloserine biosynthesis
AOT11_15165	PWY-7870	AOT11_15165
AOT11_15170	PWY-5667	CDP-diacylglycerol biosynthesis I
AOT11_15170	PWY-5981	CDP-diacylglycerol biosynthesis III
AOT11_15170	PWY-7902	AOT11_15170
AOT11_15185	PWY-1042	glycolysis IV (plant cytosol)
AOT11_15185	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_15185	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_15185	PWY-5723	Rubisco shunt
AOT11_15185	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_15185	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_15185	PWY-6901	superpathway of glucose and xylose degradation
AOT11_15185	PWY-7003	glycerol degradation to butanol
AOT11_15185	PWY-7124	ethylene biosynthesis V (engineered)
AOT11_15185	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AOT11_15200	PWY-5669	phosphatidylethanolamine biosynthesis I
AOT11_15255	PWY-6700	queuosine biosynthesis
AOT11_15275	PWY-2781	<i>cis</i>-zeatin biosynthesis
AOT11_15305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AOT11_15340	PWY-181	photorespiration
AOT11_15360	PWY-5958	acridone alkaloid biosynthesis
AOT11_15360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AOT11_15360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AOT11_15390	PWY-5723	Rubisco shunt
AOT11_15415	PWY-7731	AOT11_15415
AOT11_15505	PWY-3821	galactose degradation III
AOT11_15505	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_15505	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AOT11_15505	PWY-6527	stachyose degradation
AOT11_15505	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AOT11_15505	PWY-7344	UDP-D-galactose biosynthesis
AOT11_15510	PWY-1042	glycolysis IV (plant cytosol)
AOT11_15510	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_15510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_15510	PWY-7003	glycerol degradation to butanol
AOT11_15535	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_15550	PWY-5839	menaquinol-7 biosynthesis
AOT11_15550	PWY-5851	demethylmenaquinol-9 biosynthesis
AOT11_15550	PWY-5852	demethylmenaquinol-8 biosynthesis I
AOT11_15550	PWY-5853	demethylmenaquinol-6 biosynthesis I
AOT11_15550	PWY-5890	menaquinol-10 biosynthesis
AOT11_15550	PWY-5891	menaquinol-11 biosynthesis
AOT11_15550	PWY-5892	menaquinol-12 biosynthesis
AOT11_15550	PWY-5895	menaquinol-13 biosynthesis
AOT11_15595	PWY-801	L-homocysteine and L-cysteine interconversion
AOT11_15600	PWY-2941	L-lysine biosynthesis II
AOT11_15600	PWY-2942	L-lysine biosynthesis III
AOT11_15600	PWY-5097	L-lysine biosynthesis VI
AOT11_15600	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_15600	PWY-6559	spermidine biosynthesis II
AOT11_15600	PWY-6562	norspermidine biosynthesis
AOT11_15600	PWY-7153	grixazone biosynthesis
AOT11_15600	PWY-7977	AOT11_15600
AOT11_15605	PWY-2201	folate transformations I
AOT11_15605	PWY-3841	folate transformations II
AOT11_15615	PWY-1622	formaldehyde assimilation I (serine pathway)
AOT11_15615	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AOT11_15615	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_15615	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_15615	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AOT11_15615	PWY-6549	L-glutamine biosynthesis III
AOT11_15615	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_15615	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_15615	PWY-7124	ethylene biosynthesis V (engineered)
AOT11_15620	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_15625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_15625	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_15630	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_15630	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_15635	PWY-4983	L-citrulline-nitric oxide cycle
AOT11_15635	PWY-4984	urea cycle
AOT11_15635	PWY-5	canavanine biosynthesis
AOT11_15635	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_15635	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_15640	PWY-4983	L-citrulline-nitric oxide cycle
AOT11_15640	PWY-4984	urea cycle
AOT11_15640	PWY-5	canavanine biosynthesis
AOT11_15640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_15640	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_15655	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_15655	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AOT11_15655	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_15655	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_15685	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_15690	PWY-6164	3-dehydroquinate biosynthesis I
AOT11_15705	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_15705	PWY-5723	Rubisco shunt
AOT11_15740	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_15755	PWY-3801	sucrose degradation II (sucrose synthase)
AOT11_15755	PWY-5054	sorbitol biosynthesis I
AOT11_15755	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AOT11_15755	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AOT11_15755	PWY-5659	GDP-mannose biosynthesis
AOT11_15755	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_15755	PWY-621	sucrose degradation III (sucrose invertase)
AOT11_15755	PWY-622	starch biosynthesis
AOT11_15755	PWY-6981	chitin biosynthesis
AOT11_15755	PWY-6992	1,5-anhydrofructose degradation
AOT11_15755	PWY-7238	sucrose biosynthesis II
AOT11_15755	PWY-7347	sucrose biosynthesis III
AOT11_15755	PWY-7385	1,3-propanediol biosynthesis (engineered)
AOT11_15790	PWY-6683	sulfate reduction III (assimilatory)
AOT11_15795	PWY-6683	sulfate reduction III (assimilatory)
AOT11_15890	PWY-2201	folate transformations I
AOT11_15890	PWY-3841	folate transformations II
AOT11_15890	PWY-7977	AOT11_15890
AOT11_15895	PWY-2941	L-lysine biosynthesis II
AOT11_15895	PWY-2942	L-lysine biosynthesis III
AOT11_15895	PWY-5097	L-lysine biosynthesis VI
AOT11_15895	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_15895	PWY-6559	spermidine biosynthesis II
AOT11_15895	PWY-6562	norspermidine biosynthesis
AOT11_15895	PWY-7153	grixazone biosynthesis
AOT11_15895	PWY-7977	AOT11_15895
AOT11_15900	PWY-6832	2-aminoethylphosphonate degradation II
AOT11_15915	PWY-3801	sucrose degradation II (sucrose synthase)
AOT11_15915	PWY-6527	stachyose degradation
AOT11_15915	PWY-7238	sucrose biosynthesis II
AOT11_15915	PWY-7343	UDP-glucose biosynthesis
AOT11_15915	PWY-7817	AOT11_15915
AOT11_16085	PWY-5686	UMP biosynthesis
AOT11_16085	PWY-7790	AOT11_16085
AOT11_16085	PWY-7791	AOT11_16085
AOT11_16090	PWY-4981	L-proline biosynthesis II (from arginine)
AOT11_16090	PWY-4984	urea cycle
AOT11_16090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_16095	PWY-4981	L-proline biosynthesis II (from arginine)
AOT11_16360	PWY-3341	L-proline biosynthesis III
AOT11_16360	PWY-4981	L-proline biosynthesis II (from arginine)
AOT11_16360	PWY-6344	L-ornithine degradation II (Stickland reaction)
AOT11_16365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_16420	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AOT11_16420	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AOT11_16425	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_16425	PWY-5723	Rubisco shunt
AOT11_16425	PWY-6891	thiazole biosynthesis II (Bacillus)
AOT11_16425	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_16425	PWY-6901	superpathway of glucose and xylose degradation
AOT11_16425	PWY-7560	methylerythritol phosphate pathway II
AOT11_16440	PWY-1042	glycolysis IV (plant cytosol)
AOT11_16440	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_16440	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_16440	PWY-6901	superpathway of glucose and xylose degradation
AOT11_16440	PWY-7003	glycerol degradation to butanol
AOT11_16445	PWY-1042	glycolysis IV (plant cytosol)
AOT11_16445	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_16445	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_16445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_16445	PWY-7385	1,3-propanediol biosynthesis (engineered)
AOT11_16475	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AOT11_16475	PWY-5723	Rubisco shunt
AOT11_16530	PWY-5316	nicotine biosynthesis
AOT11_16530	PWY-7342	superpathway of nicotine biosynthesis
AOT11_16585	PWY-6012	acyl carrier protein metabolism I
AOT11_16585	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AOT11_16585	PWY-6289	petrobactin biosynthesis
AOT11_16625	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AOT11_16625	PWY-7177	UTP and CTP dephosphorylation II
AOT11_16625	PWY-7185	UTP and CTP dephosphorylation I
AOT11_16630	PWY-1042	glycolysis IV (plant cytosol)
AOT11_16630	PWY-1622	formaldehyde assimilation I (serine pathway)
AOT11_16630	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AOT11_16630	PWY-5484	glycolysis II (from fructose 6-phosphate)
AOT11_16630	PWY-5723	Rubisco shunt
AOT11_16630	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_16630	PWY-6886	1-butanol autotrophic biosynthesis
AOT11_16630	PWY-6901	superpathway of glucose and xylose degradation
AOT11_16630	PWY-7003	glycerol degradation to butanol
AOT11_16630	PWY-7124	ethylene biosynthesis V (engineered)
AOT11_16630	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AOT11_16655	PWY-7560	methylerythritol phosphate pathway II
AOT11_16660	PWY-7560	methylerythritol phosphate pathway II
AOT11_16670	PWY-5381	pyridine nucleotide cycling (plants)
AOT11_16670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_16670	PWY-6596	adenosine nucleotides degradation I
AOT11_16670	PWY-6606	guanosine nucleotides degradation II
AOT11_16670	PWY-6607	guanosine nucleotides degradation I
AOT11_16670	PWY-6608	guanosine nucleotides degradation III
AOT11_16670	PWY-7185	UTP and CTP dephosphorylation I
AOT11_16670	PWY-7821	AOT11_16670
AOT11_16715	PWY-2941	L-lysine biosynthesis II
AOT11_16715	PWY-2942	L-lysine biosynthesis III
AOT11_16715	PWY-5097	L-lysine biosynthesis VI
AOT11_16715	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_16715	PWY-6559	spermidine biosynthesis II
AOT11_16715	PWY-6562	norspermidine biosynthesis
AOT11_16715	PWY-7153	grixazone biosynthesis
AOT11_16715	PWY-7977	AOT11_16715
AOT11_16795	PWY-6840	homoglutathione biosynthesis
AOT11_16795	PWY-7255	ergothioneine biosynthesis I (bacteria)
AOT11_16805	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AOT11_16805	PWY-6153	autoinducer AI-2 biosynthesis I
AOT11_16805	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AOT11_16835	PWY-6829	tRNA methylation (yeast)
AOT11_16835	PWY-7285	methylwyosine biosynthesis
AOT11_16835	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AOT11_16855	PWY-7851	AOT11_16855
AOT11_16880	PWY-5316	nicotine biosynthesis
AOT11_16880	PWY-5381	pyridine nucleotide cycling (plants)
AOT11_16880	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AOT11_16880	PWY-7342	superpathway of nicotine biosynthesis
AOT11_16895	PWY-6891	thiazole biosynthesis II (Bacillus)
AOT11_16895	PWY-6892	thiazole biosynthesis I (E. coli)
AOT11_16895	PWY-7560	methylerythritol phosphate pathway II
AOT11_16905	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AOT11_16905	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AOT11_16915	PWY-6599	guanine and guanosine salvage II
AOT11_16915	PWY-6609	adenine and adenosine salvage III
AOT11_16915	PWY-6610	adenine and adenosine salvage IV
AOT11_16915	PWY-6620	guanine and guanosine salvage
AOT11_16920	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AOT11_16920	PWY-5743	3-hydroxypropanoate cycle
AOT11_16920	PWY-5744	glyoxylate assimilation
AOT11_16920	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_16920	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AOT11_16920	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_16920	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_16945	PWY-6654	phosphopantothenate biosynthesis III
AOT11_16950	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AOT11_16950	PWY-6148	tetrahydromethanopterin biosynthesis
AOT11_16950	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AOT11_16950	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_16950	PWY-7852	AOT11_16950
AOT11_16950	PWY-7853	AOT11_16950
AOT11_16980	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_16980	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AOT11_16980	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AOT11_16980	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_16990	PWY-5747	2-methylcitrate cycle II
AOT11_17040	PWY-6749	CMP-legionaminate biosynthesis I
AOT11_17050	PWY-6902	chitin degradation II
AOT11_17050	PWY-7822	AOT11_17050
AOT11_17050	PWY-7883	AOT11_17050
AOT11_17060	PWY-6788	cellulose degradation II (fungi)
AOT11_17105	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AOT11_17145	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AOT11_17145	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AOT11_17175	PWY-6614	tetrahydrofolate biosynthesis
AOT11_17180	PWY-6749	CMP-legionaminate biosynthesis I
AOT11_17325	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AOT11_17330	PWY-7181	pyrimidine deoxyribonucleosides degradation
AOT11_17335	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AOT11_17340	PWY-4202	arsenate detoxification I (glutaredoxin)
AOT11_17340	PWY-5532	adenosine nucleotides degradation IV
AOT11_17340	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_17340	PWY-6608	guanosine nucleotides degradation III
AOT11_17340	PWY-6609	adenine and adenosine salvage III
AOT11_17340	PWY-6611	adenine and adenosine salvage V
AOT11_17340	PWY-6620	guanine and guanosine salvage
AOT11_17340	PWY-6627	salinosporamide A biosynthesis
AOT11_17340	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AOT11_17340	PWY-7179	purine deoxyribonucleosides degradation I
AOT11_17340	PWY-7179-1	purine deoxyribonucleosides degradation
AOT11_17510	PWY-6807	xyloglucan degradation II (exoglucanase)
AOT11_17525	PWY-3821	galactose degradation III
AOT11_17525	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_17525	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AOT11_17525	PWY-6527	stachyose degradation
AOT11_17525	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AOT11_17525	PWY-7344	UDP-D-galactose biosynthesis
AOT11_17530	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_17530	PWY-6527	stachyose degradation
AOT11_17535	PWY-3821	galactose degradation III
AOT11_17535	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_17535	PWY-6527	stachyose degradation
AOT11_17540	PWY-6317	galactose degradation I (Leloir pathway)
AOT11_17585	PWY-4261	glycerol degradation I
AOT11_17585	PWY-6118	glycerol-3-phosphate shuttle
AOT11_17585	PWY-6952	glycerophosphodiester degradation
AOT11_17595	PWY-4261	glycerol degradation I
AOT11_17650	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_17675	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AOT11_17685	PWY-6654	phosphopantothenate biosynthesis III
AOT11_17795	PWY-6855	chitin degradation I (archaea)
AOT11_17795	PWY-6902	chitin degradation II
AOT11_17795	PWY-7822	AOT11_17795
AOT11_17900	PWY-7799	AOT11_17900
AOT11_17900	PWY-7800	AOT11_17900
AOT11_17930	PWY-5667	CDP-diacylglycerol biosynthesis I
AOT11_17930	PWY-5981	CDP-diacylglycerol biosynthesis III
AOT11_17930	PWY-7817	AOT11_17930
AOT11_17935	PWY-7560	methylerythritol phosphate pathway II
AOT11_17960	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_17960	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_17960	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_17960	PWY-5994	palmitate biosynthesis I (animals and fungi)
AOT11_17960	PWY-6113	superpathway of mycolate biosynthesis
AOT11_17960	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_17960	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_17960	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_17960	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_17960	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_17960	PWY-7858	AOT11_17960
AOT11_17960	PWYG-321	mycolate biosynthesis
AOT11_17985	PWY-4381	fatty acid biosynthesis initiation I
AOT11_17985	PWY-5743	3-hydroxypropanoate cycle
AOT11_17985	PWY-5744	glyoxylate assimilation
AOT11_17985	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_17985	PWY-6722	candicidin biosynthesis
AOT11_18020	PWY-5386	methylglyoxal degradation I
AOT11_18065	PWY-7094	fatty acid salvage
AOT11_18065	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_18070	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AOT11_18080	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AOT11_18080	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AOT11_18085	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AOT11_18085	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AOT11_18085	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AOT11_18090	PWY-7183	pyrimidine nucleobases salvage I
AOT11_18115	PWY-4202	arsenate detoxification I (glutaredoxin)
AOT11_18115	PWY-4621	arsenate detoxification II (glutaredoxin)
AOT11_18145	PWY-2941	L-lysine biosynthesis II
AOT11_18145	PWY-2942	L-lysine biosynthesis III
AOT11_18145	PWY-5097	L-lysine biosynthesis VI
AOT11_18270	PWY-7980	AOT11_18270
AOT11_18455	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_18455	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_18455	PWY-6863	pyruvate fermentation to hexanol
AOT11_18455	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_18455	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_18455	PWY-6948	sitosterol degradation to androstenedione
AOT11_18455	PWY-7094	fatty acid salvage
AOT11_18455	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AOT11_18455	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AOT11_18455	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AOT11_18455	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AOT11_18455	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AOT11_18455	PWY-735	jasmonic acid biosynthesis
AOT11_18455	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_18455	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_18455	PWY-7726	AOT11_18455
AOT11_18460	PWY-1361	benzoyl-CoA degradation I (aerobic)
AOT11_18460	PWY-5109	2-methylbutanoate biosynthesis
AOT11_18460	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AOT11_18460	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AOT11_18460	PWY-5177	glutaryl-CoA degradation
AOT11_18460	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_18460	PWY-6435	4-hydroxybenzoate biosynthesis V
AOT11_18460	PWY-6583	pyruvate fermentation to butanol I
AOT11_18460	PWY-6863	pyruvate fermentation to hexanol
AOT11_18460	PWY-6883	pyruvate fermentation to butanol II
AOT11_18460	PWY-6944	androstenedione degradation
AOT11_18460	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AOT11_18460	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AOT11_18460	PWY-7007	methyl ketone biosynthesis
AOT11_18460	PWY-7046	4-coumarate degradation (anaerobic)
AOT11_18460	PWY-7094	fatty acid salvage
AOT11_18460	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AOT11_18460	PWY-735	jasmonic acid biosynthesis
AOT11_18460	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AOT11_18460	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AOT11_18460	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AOT11_18460	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AOT11_18460	PWY-7726	AOT11_18460
AOT11_18460	PWY-7778	AOT11_18460
AOT11_18460	PWY-7779	AOT11_18460
AOT11_18485	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_18505	PWY-7892	AOT11_18505
AOT11_18520	PWY-2941	L-lysine biosynthesis II
AOT11_18520	PWY-2942	L-lysine biosynthesis III
AOT11_18520	PWY-5097	L-lysine biosynthesis VI
AOT11_18520	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AOT11_18520	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AOT11_18520	PWY-6559	spermidine biosynthesis II
AOT11_18520	PWY-6562	norspermidine biosynthesis
AOT11_18520	PWY-7153	grixazone biosynthesis
AOT11_18520	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AOT11_18520	PWY-7977	AOT11_18520
AOT11_18535	PWY-4381	fatty acid biosynthesis initiation I
AOT11_18535	PWY-5743	3-hydroxypropanoate cycle
AOT11_18535	PWY-5744	glyoxylate assimilation
AOT11_18535	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AOT11_18535	PWY-6722	candicidin biosynthesis
AOT11_18540	PWY-2161	folate polyglutamylation
AOT11_18555	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AOT11_18555	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AOT11_18555	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AOT11_18555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AOT11_18570	PWY-6605	adenine and adenosine salvage II
AOT11_18570	PWY-6610	adenine and adenosine salvage IV
AOT11_18570	PWY-7805	AOT11_18570
AOT11_18570	PWY-7807	AOT11_18570
AOT11_18655	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AOT11_18655	PWY-5491	diethylphosphate degradation
AOT11_18675	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AOT11_18675	PWY-2201	folate transformations I
AOT11_18675	PWY-3841	folate transformations II
AOT11_18675	PWY-5030	L-histidine degradation III
AOT11_18675	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_18675	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AOT11_18675	PWY-7909	AOT11_18675
AOT11_18810	PWY-4202	arsenate detoxification I (glutaredoxin)
AOT11_18810	PWY-5532	adenosine nucleotides degradation IV
AOT11_18810	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AOT11_18810	PWY-6608	guanosine nucleotides degradation III
AOT11_18810	PWY-6609	adenine and adenosine salvage III
AOT11_18810	PWY-6611	adenine and adenosine salvage V
AOT11_18810	PWY-6620	guanine and guanosine salvage
AOT11_18810	PWY-6627	salinosporamide A biosynthesis
AOT11_18810	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AOT11_18810	PWY-7179	purine deoxyribonucleosides degradation I
AOT11_18810	PWY-7179-1	purine deoxyribonucleosides degradation
AOT11_18845	PWY-6896	thiamin salvage I
AOT11_18920	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_18970	PWY-5480	pyruvate fermentation to ethanol I
AOT11_18970	PWY-5485	pyruvate fermentation to acetate IV
AOT11_18970	PWY-5493	reductive monocarboxylic acid cycle
AOT11_19055	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_19055	PWY-6549	L-glutamine biosynthesis III
AOT11_19055	PWY-6728	methylaspartate cycle
AOT11_19055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_19055	PWY-7124	ethylene biosynthesis V (engineered)
AOT11_19055	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_19055	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AOT11_19080	PWY-7802	AOT11_19080
AOT11_19085	PWY-7801	AOT11_19085
AOT11_19095	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_19115	PWY-622	starch biosynthesis
AOT11_19115	PWY-7902	AOT11_19115
AOT11_19120	PWY-622	starch biosynthesis
AOT11_19185	PWY-6840	homoglutathione biosynthesis
AOT11_19185	PWY-7255	ergothioneine biosynthesis I (bacteria)
AOT11_19285	PWY-5316	nicotine biosynthesis
AOT11_19285	PWY-7342	superpathway of nicotine biosynthesis
AOT11_19520	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AOT11_19520	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AOT11_19520	PWY-6936	seleno-amino acid biosynthesis
AOT11_19520	PWY-702	L-methionine biosynthesis II
AOT11_19525	PWY-1281	sulfoacetaldehyde degradation I
AOT11_19525	PWY-5482	pyruvate fermentation to acetate II
AOT11_19525	PWY-5485	pyruvate fermentation to acetate IV
AOT11_19525	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_19525	PWY-6637	sulfolactate degradation II
AOT11_19530	PWY-5482	pyruvate fermentation to acetate II
AOT11_19530	PWY-5485	pyruvate fermentation to acetate IV
AOT11_19530	PWY-5497	purine nucleobases degradation II (anaerobic)
AOT11_19555	PWY-842	starch degradation I
AOT11_19590	PWY-6168	flavin biosynthesis III (fungi)
AOT11_19590	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AOT11_19590	PWY-7991	AOT11_19590
AOT11_19695	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_19695	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AOT11_19695	PWY-6638	sulfolactate degradation III
AOT11_19695	PWY-6642	(<i>R</i>)-cysteate degradation
AOT11_19695	PWY-6643	coenzyme M biosynthesis II
AOT11_19695	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AOT11_19695	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AOT11_19695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AOT11_19770	PWY-5958	acridone alkaloid biosynthesis
AOT11_19770	PWY-6543	4-aminobenzoate biosynthesis
AOT11_19770	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AOT11_19770	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AOT11_19775	PWY-5392	reductive TCA cycle II
AOT11_19775	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AOT11_19775	PWY-5690	TCA cycle II (plants and fungi)
AOT11_19775	PWY-5913	TCA cycle VI (obligate autotrophs)
AOT11_19775	PWY-6728	methylaspartate cycle
AOT11_19775	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AOT11_19775	PWY-7254	TCA cycle VII (acetate-producers)
AOT11_19775	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AOT11_19945	PWY-6655	xanthan biosynthesis
AOT11_19945	PWY-6658	acetan biosynthesis
AOT11_19995	PWY-6807	xyloglucan degradation II (exoglucanase)
AOT11_20205	PWY-40	putrescine biosynthesis I
AOT11_20205	PWY-6305	putrescine biosynthesis IV
AOT11_20210	PWY-40	putrescine biosynthesis I
AOT11_20210	PWY-43	putrescine biosynthesis II
AOT11_20210	PWY-6305	putrescine biosynthesis IV
AOT11_20210	PWY-6834	spermidine biosynthesis III
AOT11_20285	PWY-5381	pyridine nucleotide cycling (plants)
AOT11_20320	PWY-6556	pyrimidine ribonucleosides salvage II
AOT11_20320	PWY-7181	pyrimidine deoxyribonucleosides degradation
AOT11_20320	PWY-7193	pyrimidine ribonucleosides salvage I
AOT11_20320	PWY-7199	pyrimidine deoxyribonucleosides salvage
AOT11_20355	PWY-6825	phosphatidylcholine biosynthesis V
AOT11_20370	PWY-5028	L-histidine degradation II
AOT11_20370	PWY-5030	L-histidine degradation III
AOT11_20375	PWY-5028	L-histidine degradation II
AOT11_20375	PWY-5030	L-histidine degradation III
AOT11_20385	PWY-5028	L-histidine degradation II
AOT11_20385	PWY-5030	L-histidine degradation III
AOT11_20645	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AOT11_20710	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AOT11_21355	PWY-6167	flavin biosynthesis II (archaea)
AOT11_21355	PWY-6168	flavin biosynthesis III (fungi)
AOT11_21355	PWY-7980	AOT11_21355
AOT11_21405	PWY-6517	<i>N</i>-acetylglucosamine degradation II
AOT11_21405	PWY-6906	chitin derivatives degradation
AOT11_21415	PWY-6823	molybdenum cofactor biosynthesis
AOT11_21420	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AOT11_21420	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AOT11_21610	PWY-3781	aerobic respiration I (cytochrome c)
AOT11_21610	PWY-4521	arsenite oxidation I (respiratory)
AOT11_21610	PWY-6692	Fe(II) oxidation
AOT11_21610	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AOT11_21655	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AOT11_21655	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AOT11_21655	PWY-5989	stearate biosynthesis II (bacteria and plants)
AOT11_21655	PWY-5994	palmitate biosynthesis I (animals and fungi)
AOT11_21655	PWY-6113	superpathway of mycolate biosynthesis
AOT11_21655	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AOT11_21655	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AOT11_21655	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AOT11_21655	PWY-7663	gondoate biosynthesis (anaerobic)
AOT11_21655	PWY-7664	oleate biosynthesis IV (anaerobic)
AOT11_21655	PWY-7858	AOT11_21655
AOT11_21655	PWYG-321	mycolate biosynthesis
AOT11_21690	PWY-5686	UMP biosynthesis
AOT11_21695	PWY-5022	4-aminobutanoate degradation V
AOT11_21695	PWY-6728	methylaspartate cycle
AOT11_21695	PWY-7126	ethylene biosynthesis IV
AOT11_21760	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AOT11_21760	PWY-6164	3-dehydroquinate biosynthesis I
AOT11_21760	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AOT11_21900	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AOT11_21900	PWY-6855	chitin degradation I (archaea)
AOT11_21900	PWY-6906	chitin derivatives degradation
AOT11_21905	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AOT11_21975	PWY-5667	CDP-diacylglycerol biosynthesis I
AOT11_21975	PWY-5981	CDP-diacylglycerol biosynthesis III
AOT11_21975	PWY-6453	stigma estolide biosynthesis
AOT11_21975	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AOT11_21975	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AOT11_21975	PWY-7587	oleate biosynthesis III (cyanobacteria)
AOT11_21975	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AOT11_21975	PWY-7782	AOT11_21975
AOT11_21990	PWY-5194	siroheme biosynthesis
AOT11_21990	PWY-5196	factor 430 biosynthesis
AOT11_21990	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
