AOT11_00020 SM00382 ATPases associated with a variety of cellular activities AOT11_00075 SM00382 ATPases associated with a variety of cellular activities AOT11_00085 SM00421 helix_turn_helix, Lux Regulon AOT11_00090 SM00421 helix_turn_helix, Lux Regulon AOT11_00100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_00100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00120 SM00327 von Willebrand factor (vWF) type A domain AOT11_00125 SM00028 Tetratricopeptide repeats AOT11_00125 SM00327 von Willebrand factor (vWF) type A domain AOT11_00135 SM00267 diguanylate cyclase AOT11_00140 SM00382 ATPases associated with a variety of cellular activities AOT11_00160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_00160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_00165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00190 SM00487 DEAD-like helicases superfamily AOT11_00190 SM00490 helicase superfamily c-terminal domain AOT11_00200 SM00257 Lysin motif AOT11_00210 SM00422 helix_turn_helix, mercury resistance AOT11_00230 SM00028 Tetratricopeptide repeats AOT11_00235 SM00267 diguanylate cyclase AOT11_00255 SM00382 ATPases associated with a variety of cellular activities AOT11_00270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOT11_00270 SM00245 tail specific protease AOT11_00290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_00290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00305 SM01057 Eukaryotic-type carbonic anhydrase AOT11_00330 SM00382 ATPases associated with a variety of cellular activities AOT11_00370 SM00849 Metallo-beta-lactamase superfamily AOT11_00430 SM00829 Enoylreductase AOT11_00485 SM01060 AOT11_00485 AOT11_00490 SM00248 ankyrin repeats AOT11_00505 SM00481 DNA polymerase alpha chain like domain AOT11_00515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_00540 SM00267 diguanylate cyclase AOT11_00540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00580 SM00342 helix_turn_helix, arabinose operon control protein AOT11_00645 SM00014 Acid phosphatase homologues AOT11_00720 SM00448 cheY-homologous receiver domain AOT11_00720 SM00862 Transcriptional regulatory protein, C terminal AOT11_00725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_00725 SM00387 Histidine kinase-like ATPases AOT11_00725 SM00388 His Kinase A (phosphoacceptor) domain AOT11_00750 SM00642 Alpha-amylase domain AOT11_00760 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_00770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_00770 SM00267 diguanylate cyclase AOT11_00780 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_00785 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOT11_00810 SM00421 helix_turn_helix, Lux Regulon AOT11_00830 SM00849 Metallo-beta-lactamase superfamily AOT11_00905 SM00357 Cold shock protein domain AOT11_00965 SM00354 helix_turn _helix lactose operon repressor AOT11_00975 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOT11_01030 SM00342 helix_turn_helix, arabinose operon control protein AOT11_01050 SM00421 helix_turn_helix, Lux Regulon AOT11_01080 SM00342 helix_turn_helix, arabinose operon control protein AOT11_01080 SM00871 Bacterial transcription activator, effector binding domain AOT11_01120 SM01038 Beta galactosidase small chain AOT11_01130 SM00382 ATPases associated with a variety of cellular activities AOT11_01140 SM00354 helix_turn _helix lactose operon repressor AOT11_01160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_01160 SM00267 diguanylate cyclase AOT11_01175 SM00974 AOT11_01175 AOT11_01205 SM01217 AOT11_01205 AOT11_01210 SM00342 helix_turn_helix, arabinose operon control protein AOT11_01230 SM00354 helix_turn _helix lactose operon repressor AOT11_01240 SM00382 ATPases associated with a variety of cellular activities AOT11_01245 SM00382 ATPases associated with a variety of cellular activities AOT11_01270 SM00354 helix_turn _helix lactose operon repressor AOT11_01275 SM00382 ATPases associated with a variety of cellular activities AOT11_01300 SM00354 helix_turn _helix lactose operon repressor AOT11_01320 SM00267 diguanylate cyclase AOT11_01325 SM00448 cheY-homologous receiver domain AOT11_01325 SM00862 Transcriptional regulatory protein, C terminal AOT11_01330 SM00387 Histidine kinase-like ATPases AOT11_01330 SM00388 His Kinase A (phosphoacceptor) domain AOT11_01360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_01380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_01380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_01395 SM00495 Chitin-binding domain type 3 AOT11_01410 SM00344 helix_turn_helix ASNC type AOT11_01420 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_01425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_01425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_01425 SM01358 AOT11_01425 AOT11_01430 SM00642 Alpha-amylase domain AOT11_01445 SM00421 helix_turn_helix, Lux Regulon AOT11_01460 SM00632 AOT11_01460 AOT11_01460 SM00642 Alpha-amylase domain AOT11_01460 SM01065 Starch binding domain AOT11_01470 SM00382 ATPases associated with a variety of cellular activities AOT11_01505 SM00642 Alpha-amylase domain AOT11_01585 SM00671 Sel1-like repeats. AOT11_01590 SM00642 Alpha-amylase domain AOT11_01615 SM00642 Alpha-amylase domain AOT11_01620 SM00267 diguanylate cyclase AOT11_01625 SM00267 diguanylate cyclase AOT11_01650 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOT11_01650 SM00495 Chitin-binding domain type 3 AOT11_01650 SM00636 AOT11_01650 AOT11_01690 SM00342 helix_turn_helix, arabinose operon control protein AOT11_01690 SM01009 AlkA N-terminal domain AOT11_01740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_01740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_01740 SM01049 AOT11_01740 AOT11_01745 SM00448 cheY-homologous receiver domain AOT11_01745 SM00850 LytTr DNA-binding domain AOT11_01750 SM00387 Histidine kinase-like ATPases AOT11_01770 SM00382 ATPases associated with a variety of cellular activities AOT11_01790 SM00387 Histidine kinase-like ATPases AOT11_01790 SM00388 His Kinase A (phosphoacceptor) domain AOT11_01790 SM00448 cheY-homologous receiver domain AOT11_01810 SM00382 ATPases associated with a variety of cellular activities AOT11_01815 SM00382 ATPases associated with a variety of cellular activities AOT11_01835 SM00470 ParB-like nuclease domain AOT11_01850 SM00448 cheY-homologous receiver domain AOT11_01855 SM00073 Histidine Phosphotransfer domain AOT11_01855 SM00260 Two component signalling adaptor domain AOT11_01855 SM00387 Histidine kinase-like ATPases AOT11_01855 SM01231 AOT11_01855 AOT11_01860 SM00260 Two component signalling adaptor domain AOT11_01865 SM00260 Two component signalling adaptor domain AOT11_01870 SM00091 PAS domain AOT11_01870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_01870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_01875 SM00138 Methyltransferase, chemotaxis proteins AOT11_01885 SM00448 cheY-homologous receiver domain AOT11_01890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_01900 SM00331 Sigma factor PP2C-like phosphatases AOT11_01900 SM00448 cheY-homologous receiver domain AOT11_01940 SM00855 Phosphoglycerate mutase family AOT11_01945 SM00052 Putative diguanylate phosphodiesterase AOT11_01975 SM00028 Tetratricopeptide repeats AOT11_01980 SM00883 Chaperonin 10 Kd subunit AOT11_02020 SM00382 ATPases associated with a variety of cellular activities AOT11_02025 SM00052 Putative diguanylate phosphodiesterase AOT11_02025 SM00267 diguanylate cyclase AOT11_02040 SM00448 cheY-homologous receiver domain AOT11_02045 SM00387 Histidine kinase-like ATPases AOT11_02045 SM00388 His Kinase A (phosphoacceptor) domain AOT11_02055 SM00421 helix_turn_helix, Lux Regulon AOT11_02060 SM00342 helix_turn_helix, arabinose operon control protein AOT11_02080 SM00344 helix_turn_helix ASNC type AOT11_02090 SM00382 ATPases associated with a variety of cellular activities AOT11_02110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOT11_02120 SM01007 Class II Aldolase and Adducin N-terminal domain AOT11_02135 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_02135 SM01134 AOT11_02135 AOT11_02210 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_02210 SM00895 AOT11_02210 AOT11_02220 SM00487 DEAD-like helicases superfamily AOT11_02220 SM00490 helicase superfamily c-terminal domain AOT11_02270 SM00487 DEAD-like helicases superfamily AOT11_02285 SM00342 helix_turn_helix, arabinose operon control protein AOT11_02300 SM00342 helix_turn_helix, arabinose operon control protein AOT11_02320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_02350 SM00671 Sel1-like repeats. AOT11_02375 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_02395 SM00849 Metallo-beta-lactamase superfamily AOT11_02410 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_02410 SM01134 AOT11_02410 AOT11_02420 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_02420 SM01134 AOT11_02420 AOT11_02470 SM00895 AOT11_02470 AOT11_02485 SM00382 ATPases associated with a variety of cellular activities AOT11_02520 SM00382 ATPases associated with a variety of cellular activities AOT11_02525 SM00479 AOT11_02525 AOT11_02550 SM00267 diguanylate cyclase AOT11_02580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_02580 SM00387 Histidine kinase-like ATPases AOT11_02580 SM00388 His Kinase A (phosphoacceptor) domain AOT11_02585 SM00448 cheY-homologous receiver domain AOT11_02585 SM00862 Transcriptional regulatory protein, C terminal AOT11_02595 SM00849 Metallo-beta-lactamase superfamily AOT11_02605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_02605 SM00387 Histidine kinase-like ATPases AOT11_02610 SM00382 ATPases associated with a variety of cellular activities AOT11_02610 SM00448 cheY-homologous receiver domain AOT11_02640 SM00448 cheY-homologous receiver domain AOT11_02640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_02645 SM00073 Histidine Phosphotransfer domain AOT11_02645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_02645 SM00091 PAS domain AOT11_02645 SM00387 Histidine kinase-like ATPases AOT11_02645 SM00388 His Kinase A (phosphoacceptor) domain AOT11_02645 SM00448 cheY-homologous receiver domain AOT11_02650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_02650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_02705 SM00487 DEAD-like helicases superfamily AOT11_02705 SM00490 helicase superfamily c-terminal domain AOT11_02770 SM00342 helix_turn_helix, arabinose operon control protein AOT11_02810 SM00838 Elongation factor G C-terminus AOT11_02810 SM00889 Elongation factor G, domain IV AOT11_02820 SM00267 diguanylate cyclase AOT11_02820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_02840 SM00422 helix_turn_helix, mercury resistance AOT11_02850 SM00342 helix_turn_helix, arabinose operon control protein AOT11_02865 SM00387 Histidine kinase-like ATPases AOT11_02865 SM00388 His Kinase A (phosphoacceptor) domain AOT11_02865 SM00448 cheY-homologous receiver domain AOT11_02920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_02930 SM00346 helix_turn_helix isocitrate lyase regulation AOT11_02960 SM00155 Phospholipase D. Active site motifs. AOT11_03040 SM00642 Alpha-amylase domain AOT11_03100 SM00849 Metallo-beta-lactamase superfamily AOT11_03135 SM00421 helix_turn_helix, Lux Regulon AOT11_03160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_03160 SM00091 PAS domain AOT11_03160 SM00267 diguanylate cyclase AOT11_03165 SM00382 ATPases associated with a variety of cellular activities AOT11_03175 SM01091 Transporter associated domain AOT11_03205 SM00354 helix_turn _helix lactose operon repressor AOT11_03220 SM00382 ATPases associated with a variety of cellular activities AOT11_03255 SM00849 Metallo-beta-lactamase superfamily AOT11_03295 SM00830 Chorismate mutase type II AOT11_03355 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_03360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_03360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_03365 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_03375 SM00052 Putative diguanylate phosphodiesterase AOT11_03380 SM00495 Chitin-binding domain type 3 AOT11_03400 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_03405 SM00382 ATPases associated with a variety of cellular activities AOT11_03425 SM00052 Putative diguanylate phosphodiesterase AOT11_03435 SM00849 Metallo-beta-lactamase superfamily AOT11_03465 SM00563 Phosphate acyltransferases AOT11_03470 SM00327 von Willebrand factor (vWF) type A domain AOT11_03470 SM00609 Vault protein Inter-alpha-Trypsin domain AOT11_03515 SM00382 ATPases associated with a variety of cellular activities AOT11_03540 SM00342 helix_turn_helix, arabinose operon control protein AOT11_03540 SM00871 Bacterial transcription activator, effector binding domain AOT11_03545 SM00924 MgtE intracellular N domain AOT11_03560 SM00342 helix_turn_helix, arabinose operon control protein AOT11_03570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_03585 SM00344 helix_turn_helix ASNC type AOT11_03605 SM00788 Adenylosuccinate synthetase AOT11_03620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOT11_03635 SM00387 Histidine kinase-like ATPases AOT11_03635 SM00388 His Kinase A (phosphoacceptor) domain AOT11_03635 SM00448 cheY-homologous receiver domain AOT11_03650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOT11_03685 SM00872 Alpha mannosidase, middle domain AOT11_03760 SM00387 Histidine kinase-like ATPases AOT11_03760 SM00388 His Kinase A (phosphoacceptor) domain AOT11_03760 SM00448 cheY-homologous receiver domain AOT11_03775 SM00344 helix_turn_helix ASNC type AOT11_03810 SM00822 AOT11_03810 AOT11_03845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOT11_03855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_03855 SM00387 Histidine kinase-like ATPases AOT11_03860 SM00421 helix_turn_helix, Lux Regulon AOT11_03860 SM00448 cheY-homologous receiver domain AOT11_03870 SM00448 cheY-homologous receiver domain AOT11_03890 SM01240 AOT11_03890 AOT11_03970 SM00342 helix_turn_helix, arabinose operon control protein AOT11_04040 SM00487 DEAD-like helicases superfamily AOT11_04040 SM00490 helicase superfamily c-terminal domain AOT11_04055 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_04095 SM00382 ATPases associated with a variety of cellular activities AOT11_04110 SM01119 AOT11_04110 AOT11_04145 SM00052 Putative diguanylate phosphodiesterase AOT11_04145 SM00267 diguanylate cyclase AOT11_04175 SM00052 Putative diguanylate phosphodiesterase AOT11_04175 SM00267 diguanylate cyclase AOT11_04200 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_04220 SM00342 helix_turn_helix, arabinose operon control protein AOT11_04295 SM00091 PAS domain AOT11_04295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_04300 SM00052 Putative diguanylate phosphodiesterase AOT11_04300 SM00267 diguanylate cyclase AOT11_04300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_04310 SM00861 Transketolase, pyrimidine binding domain AOT11_04325 SM00636 AOT11_04325 AOT11_04330 SM00052 Putative diguanylate phosphodiesterase AOT11_04330 SM00267 diguanylate cyclase AOT11_04335 SM00450 Rhodanese Homology Domain AOT11_04345 SM00852 Probable molybdopterin binding domain AOT11_04405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_04405 SM01358 AOT11_04405 AOT11_04440 SM01322 AOT11_04440 AOT11_04445 SM00357 Cold shock protein domain AOT11_04460 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_04460 SM00267 diguanylate cyclase AOT11_04480 SM00387 Histidine kinase-like ATPases AOT11_04485 SM00421 helix_turn_helix, Lux Regulon AOT11_04485 SM00448 cheY-homologous receiver domain AOT11_04505 SM00829 Enoylreductase AOT11_04525 SM00357 Cold shock protein domain AOT11_04560 SM00422 helix_turn_helix, mercury resistance AOT11_04595 SM00822 AOT11_04595 AOT11_04600 SM00953 AOT11_04600 AOT11_04620 SM00382 ATPases associated with a variety of cellular activities AOT11_04630 SM00382 ATPases associated with a variety of cellular activities AOT11_04650 SM01005 Alanine racemase, C-terminal domain AOT11_04655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_04655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_04665 SM00893 Electron transfer flavoprotein domain AOT11_04670 SM00893 Electron transfer flavoprotein domain AOT11_04680 SM00861 Transketolase, pyrimidine binding domain AOT11_04700 SM00448 cheY-homologous receiver domain AOT11_04700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_04705 SM00387 Histidine kinase-like ATPases AOT11_04755 SM00052 Putative diguanylate phosphodiesterase AOT11_04755 SM00267 diguanylate cyclase AOT11_04790 SM00220 Serine/Threonine protein kinases, catalytic domain AOT11_04795 SM00240 Forkhead associated domain AOT11_04825 SM00331 Sigma factor PP2C-like phosphatases AOT11_04825 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AOT11_04870 SM00382 ATPases associated with a variety of cellular activities AOT11_04870 SM01086 C-terminal, D2-small domain, of ClpB protein AOT11_04900 SM00248 ankyrin repeats AOT11_04920 SM00248 ankyrin repeats AOT11_04970 SM00458 Ricin-type beta-trefoil AOT11_04980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_04980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_04985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_04985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_04990 SM00642 Alpha-amylase domain AOT11_05000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOT11_05020 SM01012 AOT11_05020 AOT11_05035 SM00382 ATPases associated with a variety of cellular activities AOT11_05055 SM00028 Tetratricopeptide repeats AOT11_05055 SM00267 diguanylate cyclase AOT11_05065 SM00833 Cobalamin synthesis protein cobW C-terminal domain AOT11_05075 SM00487 DEAD-like helicases superfamily AOT11_05075 SM00490 helicase superfamily c-terminal domain AOT11_05090 SM00267 diguanylate cyclase AOT11_05090 SM00448 cheY-homologous receiver domain AOT11_05100 SM00138 Methyltransferase, chemotaxis proteins AOT11_05105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_05105 SM00387 Histidine kinase-like ATPases AOT11_05105 SM00388 His Kinase A (phosphoacceptor) domain AOT11_05105 SM00448 cheY-homologous receiver domain AOT11_05130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_05190 SM00028 Tetratricopeptide repeats AOT11_05200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_05200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_05200 SM01049 AOT11_05200 AOT11_05220 SM00342 helix_turn_helix, arabinose operon control protein AOT11_05250 SM00450 Rhodanese Homology Domain AOT11_05260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOT11_05335 SM00382 ATPases associated with a variety of cellular activities AOT11_05345 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_05355 SM00267 diguanylate cyclase AOT11_05355 SM00448 cheY-homologous receiver domain AOT11_05365 SM00267 diguanylate cyclase AOT11_05390 SM00387 Histidine kinase-like ATPases AOT11_05390 SM00388 His Kinase A (phosphoacceptor) domain AOT11_05395 SM00448 cheY-homologous receiver domain AOT11_05395 SM00862 Transcriptional regulatory protein, C terminal AOT11_05430 SM00881 CoA binding domain AOT11_05445 SM00091 PAS domain AOT11_05445 SM00267 diguanylate cyclase AOT11_05445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_05460 SM00796 Allophanate hydrolase subunit 1 AOT11_05465 SM00797 Allophanate hydrolase subunit 2 AOT11_05480 SM00382 ATPases associated with a variety of cellular activities AOT11_05495 SM00052 Putative diguanylate phosphodiesterase AOT11_05495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_05495 SM00267 diguanylate cyclase AOT11_05510 SM00271 DnaJ molecular chaperone homology domain AOT11_05535 SM00642 Alpha-amylase domain AOT11_05580 SM00782 PhnA Zinc-Ribbon AOT11_05625 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_05630 SM00867 YceI-like domain AOT11_05645 SM00052 Putative diguanylate phosphodiesterase AOT11_05650 SM00487 DEAD-like helicases superfamily AOT11_05650 SM00490 helicase superfamily c-terminal domain AOT11_05660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_05670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_05700 SM00495 Chitin-binding domain type 3 AOT11_05700 SM00636 AOT11_05700 AOT11_05705 SM00342 helix_turn_helix, arabinose operon control protein AOT11_05715 SM00448 cheY-homologous receiver domain AOT11_05720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_05720 SM00387 Histidine kinase-like ATPases AOT11_05720 SM00388 His Kinase A (phosphoacceptor) domain AOT11_05740 SM00052 Putative diguanylate phosphodiesterase AOT11_05760 SM00354 helix_turn _helix lactose operon repressor AOT11_05805 SM00020 Trypsin-like serine protease AOT11_05815 SM00530 Helix-turn-helix XRE-family like proteins AOT11_05840 SM00487 DEAD-like helicases superfamily AOT11_05840 SM00490 helicase superfamily c-terminal domain AOT11_05875 SM00382 ATPases associated with a variety of cellular activities AOT11_05945 SM00990 AOT11_05945 AOT11_05950 SM00028 Tetratricopeptide repeats AOT11_05985 SM00327 von Willebrand factor (vWF) type A domain AOT11_06030 SM00487 DEAD-like helicases superfamily AOT11_06030 SM00490 helicase superfamily c-terminal domain AOT11_06035 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_06035 SM00357 Cold shock protein domain AOT11_06035 SM00955 AOT11_06035 AOT11_06040 SM00342 helix_turn_helix, arabinose operon control protein AOT11_06060 SM00635 Bacterial Ig-like domain 2 AOT11_06065 SM00052 Putative diguanylate phosphodiesterase AOT11_06065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_06065 SM00267 diguanylate cyclase AOT11_06075 SM00448 cheY-homologous receiver domain AOT11_06080 SM00052 Putative diguanylate phosphodiesterase AOT11_06080 SM00421 helix_turn_helix, Lux Regulon AOT11_06080 SM00448 cheY-homologous receiver domain AOT11_06085 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_06085 SM00387 Histidine kinase-like ATPases AOT11_06085 SM00388 His Kinase A (phosphoacceptor) domain AOT11_06085 SM00448 cheY-homologous receiver domain AOT11_06090 SM00487 DEAD-like helicases superfamily AOT11_06090 SM00490 helicase superfamily c-terminal domain AOT11_06145 SM00073 Histidine Phosphotransfer domain AOT11_06145 SM00387 Histidine kinase-like ATPases AOT11_06145 SM00388 His Kinase A (phosphoacceptor) domain AOT11_06145 SM00448 cheY-homologous receiver domain AOT11_06155 SM00851 MGS-like domain AOT11_06195 SM00422 helix_turn_helix, mercury resistance AOT11_06200 SM00382 ATPases associated with a variety of cellular activities AOT11_06225 SM01266 AOT11_06225 AOT11_06230 SM00448 cheY-homologous receiver domain AOT11_06235 SM00387 Histidine kinase-like ATPases AOT11_06275 SM00327 von Willebrand factor (vWF) type A domain AOT11_06360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_06360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06380 SM00260 Two component signalling adaptor domain AOT11_06380 SM00448 cheY-homologous receiver domain AOT11_06390 SM00354 helix_turn _helix lactose operon repressor AOT11_06410 SM00382 ATPases associated with a variety of cellular activities AOT11_06435 SM00327 von Willebrand factor (vWF) type A domain AOT11_06440 SM00382 ATPases associated with a variety of cellular activities AOT11_06475 SM00014 Acid phosphatase homologues AOT11_06480 SM01022 AOT11_06480 AOT11_06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_06580 SM00450 Rhodanese Homology Domain AOT11_06665 SM00382 ATPases associated with a variety of cellular activities AOT11_06695 SM00028 Tetratricopeptide repeats AOT11_06710 SM00936 Penicillin-binding protein 5, C-terminal domain AOT11_06760 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_06760 SM00866 AOT11_06760 AOT11_06770 SM00382 ATPases associated with a variety of cellular activities AOT11_06795 SM00342 helix_turn_helix, arabinose operon control protein AOT11_06795 SM00871 Bacterial transcription activator, effector binding domain AOT11_06810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06820 SM00342 helix_turn_helix, arabinose operon control protein AOT11_06845 SM01266 AOT11_06845 AOT11_06860 SM00267 diguanylate cyclase AOT11_06870 SM00530 Helix-turn-helix XRE-family like proteins AOT11_06875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_06880 SM00267 diguanylate cyclase AOT11_06880 SM01079 AOT11_06880 AOT11_06970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_06975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_06975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_06980 SM00642 Alpha-amylase domain AOT11_06995 SM00260 Two component signalling adaptor domain AOT11_06995 SM00448 cheY-homologous receiver domain AOT11_07015 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_07045 SM00382 ATPases associated with a variety of cellular activities AOT11_07105 SM00267 diguanylate cyclase AOT11_07120 SM00342 helix_turn_helix, arabinose operon control protein AOT11_07160 SM00382 ATPases associated with a variety of cellular activities AOT11_07235 SM00112 Cadherin repeats. AOT11_07255 SM00028 Tetratricopeptide repeats AOT11_07255 SM00267 diguanylate cyclase AOT11_07275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_07275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_07285 SM00020 Trypsin-like serine protease AOT11_07285 SM00495 Chitin-binding domain type 3 AOT11_07320 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_07320 SM00895 AOT11_07320 AOT11_07360 SM00421 helix_turn_helix, Lux Regulon AOT11_07370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_07370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_07390 SM00382 ATPases associated with a variety of cellular activities AOT11_07395 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_07395 SM01134 AOT11_07395 AOT11_07415 SM00357 Cold shock protein domain AOT11_07420 SM00267 diguanylate cyclase AOT11_07450 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_07490 SM00028 Tetratricopeptide repeats AOT11_07540 SM00382 ATPases associated with a variety of cellular activities AOT11_07560 SM00855 Phosphoglycerate mutase family AOT11_07620 SM00487 DEAD-like helicases superfamily AOT11_07620 SM00490 helicase superfamily c-terminal domain AOT11_07620 SM00847 Helicase associated domain (HA2) Add an annotation AOT11_07625 SM00919 Malic enzyme, NAD binding domain AOT11_07625 SM01274 AOT11_07625 AOT11_07640 SM00267 diguanylate cyclase AOT11_07670 SM00382 ATPases associated with a variety of cellular activities AOT11_07675 SM00382 ATPases associated with a variety of cellular activities AOT11_07690 SM00387 Histidine kinase-like ATPases AOT11_07695 SM00448 cheY-homologous receiver domain AOT11_07790 SM00382 ATPases associated with a variety of cellular activities AOT11_07810 SM00363 S4 RNA-binding domain AOT11_07815 SM00487 DEAD-like helicases superfamily AOT11_07815 SM00490 helicase superfamily c-terminal domain AOT11_07825 SM00448 cheY-homologous receiver domain AOT11_07825 SM00862 Transcriptional regulatory protein, C terminal AOT11_07830 SM00387 Histidine kinase-like ATPases AOT11_07850 SM00267 diguanylate cyclase AOT11_07885 SM00382 ATPases associated with a variety of cellular activities AOT11_07895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_07895 SM00382 ATPases associated with a variety of cellular activities AOT11_07920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_07920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_07930 SM00155 Phospholipase D. Active site motifs. AOT11_07975 SM00382 ATPases associated with a variety of cellular activities AOT11_07995 SM00382 ATPases associated with a variety of cellular activities AOT11_08000 SM00382 ATPases associated with a variety of cellular activities AOT11_08015 SM01131 AOT11_08015 AOT11_08105 SM00840 AOT11_08105 AOT11_08120 SM00052 Putative diguanylate phosphodiesterase AOT11_08175 SM00528 Domain in histone-like proteins of HNS family AOT11_08265 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_08265 SM00876 Biotin and Thiamin Synthesis associated domain AOT11_08280 SM00382 ATPases associated with a variety of cellular activities AOT11_08290 SM00843 AOT11_08290 AOT11_08295 SM00344 helix_turn_helix ASNC type AOT11_08300 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AOT11_08300 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AOT11_08360 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AOT11_08365 SM00028 Tetratricopeptide repeats AOT11_08375 SM00411 bacterial (prokaryotic) histone like domain AOT11_08380 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_08395 SM00822 AOT11_08395 AOT11_08410 SM00481 DNA polymerase alpha chain like domain AOT11_08415 SM00260 Two component signalling adaptor domain AOT11_08415 SM00448 cheY-homologous receiver domain AOT11_08480 SM00825 Beta-ketoacyl synthase AOT11_08490 SM00822 AOT11_08490 AOT11_08495 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AOT11_08525 SM00363 S4 RNA-binding domain AOT11_08530 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_08540 SM00226 Low molecular weight phosphatase family AOT11_08615 SM00434 DNA Topoisomerase IV AOT11_08645 SM00852 Probable molybdopterin binding domain AOT11_08700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOT11_08700 SM00465 GIY-YIG type nucleases (URI domain) AOT11_08705 SM00421 helix_turn_helix, Lux Regulon AOT11_08705 SM00448 cheY-homologous receiver domain AOT11_08710 SM00486 DNA polymerase type-B family AOT11_08715 SM00052 Putative diguanylate phosphodiesterase AOT11_08725 SM00841 Elongation factor P, C-terminal AOT11_08725 SM01185 AOT11_08725 AOT11_08735 SM00363 S4 RNA-binding domain AOT11_08750 SM00481 DNA polymerase alpha chain like domain AOT11_08825 SM00382 ATPases associated with a variety of cellular activities AOT11_08830 SM00382 ATPases associated with a variety of cellular activities AOT11_08870 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_08885 SM00382 ATPases associated with a variety of cellular activities AOT11_08885 SM00448 cheY-homologous receiver domain AOT11_08890 SM00487 DEAD-like helicases superfamily AOT11_08890 SM00490 helicase superfamily c-terminal domain AOT11_08925 SM00900 AOT11_08925 AOT11_08935 SM00478 endonuclease III AOT11_08935 SM00525 AOT11_08935 AOT11_08955 SM00479 AOT11_08955 AOT11_09015 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOT11_09070 SM00155 Phospholipase D. Active site motifs. AOT11_09075 SM00267 diguanylate cyclase AOT11_09075 SM00448 cheY-homologous receiver domain AOT11_09080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_09080 SM00387 Histidine kinase-like ATPases AOT11_09080 SM00388 His Kinase A (phosphoacceptor) domain AOT11_09080 SM00448 cheY-homologous receiver domain AOT11_09090 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOT11_09090 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOT11_09090 SM00493 AOT11_09090 AOT11_09110 SM00870 AOT11_09110 AOT11_09130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOT11_09140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_09165 SM00244 prohibitin homologues AOT11_09170 SM00244 prohibitin homologues AOT11_09195 SM00382 ATPases associated with a variety of cellular activities AOT11_09205 SM00382 ATPases associated with a variety of cellular activities AOT11_09280 SM00487 DEAD-like helicases superfamily AOT11_09295 SM00530 Helix-turn-helix XRE-family like proteins AOT11_09315 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_09315 SM00267 diguanylate cyclase AOT11_09345 SM00344 helix_turn_helix ASNC type AOT11_09410 SM00978 AOT11_09410 AOT11_09420 SM00563 Phosphate acyltransferases AOT11_09440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AOT11_09470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_09475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_09480 SM01144 AOT11_09480 AOT11_09500 SM00411 bacterial (prokaryotic) histone like domain AOT11_09505 SM00382 ATPases associated with a variety of cellular activities AOT11_09505 SM00464 Found in ATP-dependent protease La (LON) AOT11_09510 SM00382 ATPases associated with a variety of cellular activities AOT11_09510 SM00994 ClpX C4-type zinc finger AOT11_09510 SM01086 C-terminal, D2-small domain, of ClpB protein AOT11_09525 SM00387 Histidine kinase-like ATPases AOT11_09525 SM00388 His Kinase A (phosphoacceptor) domain AOT11_09530 SM00382 ATPases associated with a variety of cellular activities AOT11_09530 SM00448 cheY-homologous receiver domain AOT11_09560 SM00382 ATPases associated with a variety of cellular activities AOT11_09580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_09580 SM00387 Histidine kinase-like ATPases AOT11_09585 SM00448 cheY-homologous receiver domain AOT11_09585 SM00862 Transcriptional regulatory protein, C terminal AOT11_09595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_09595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_09600 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AOT11_09625 SM00563 Phosphate acyltransferases AOT11_09685 SM00825 Beta-ketoacyl synthase AOT11_09700 SM00825 Beta-ketoacyl synthase AOT11_09710 SM00388 His Kinase A (phosphoacceptor) domain AOT11_09715 SM00448 cheY-homologous receiver domain AOT11_09715 SM00862 Transcriptional regulatory protein, C terminal AOT11_09760 SM00474 3'-5' exonuclease AOT11_09790 SM00487 DEAD-like helicases superfamily AOT11_09790 SM00491 AOT11_09790 AOT11_09810 SM00836 DALR anticodon binding domain AOT11_09810 SM01016 Arginyl tRNA synthetase N terminal dom AOT11_09830 SM00899 AOT11_09830 AOT11_09835 SM00342 helix_turn_helix, arabinose operon control protein AOT11_09845 SM00382 ATPases associated with a variety of cellular activities AOT11_09855 SM00881 CoA binding domain AOT11_09870 SM00861 Transketolase, pyrimidine binding domain AOT11_09995 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOT11_10020 SM00387 Histidine kinase-like ATPases AOT11_10025 SM00862 Transcriptional regulatory protein, C terminal AOT11_10050 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_10055 SM00938 Nitrogen regulatory protein P-II AOT11_10085 SM00244 prohibitin homologues AOT11_10105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOT11_10105 SM00292 breast cancer carboxy-terminal domain AOT11_10105 SM00532 Ligase N family AOT11_10110 SM00771 ZipA, C-terminal domain (FtsZ-binding) AOT11_10165 SM00047 Lysozyme subfamily 2 AOT11_10210 SM00138 Methyltransferase, chemotaxis proteins AOT11_10215 SM00260 Two component signalling adaptor domain AOT11_10215 SM00448 cheY-homologous receiver domain AOT11_10220 SM00858 AOT11_10220 AOT11_10285 SM01081 Putative carbohydrate binding domain AOT11_10305 SM00463 Small MutS-related domain AOT11_10310 SM00363 S4 RNA-binding domain AOT11_10345 SM00937 AOT11_10345 AOT11_10365 SM01400 AOT11_10365 AOT11_10460 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_10475 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_10475 SM01091 Transporter associated domain AOT11_10530 SM00936 Penicillin-binding protein 5, C-terminal domain AOT11_10545 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_10565 SM00862 Transcriptional regulatory protein, C terminal AOT11_10585 SM00642 Alpha-amylase domain AOT11_10595 SM00354 helix_turn _helix lactose operon repressor AOT11_10605 SM00382 ATPases associated with a variety of cellular activities AOT11_10605 SM00930 AOT11_10605 AOT11_10635 SM00028 Tetratricopeptide repeats AOT11_10640 SM00267 diguanylate cyclase AOT11_10650 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOT11_10650 SM00475 5'-3' exonuclease AOT11_10655 SM00477 DNA/RNA non-specific endonuclease AOT11_10655 SM00892 DNA/RNA non-specific endonuclease AOT11_10680 SM00981 AOT11_10680 AOT11_10705 SM00861 Transketolase, pyrimidine binding domain AOT11_10755 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOT11_10805 SM01211 AOT11_10805 AOT11_10810 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_10825 SM00829 Enoylreductase AOT11_10865 SM00271 DnaJ molecular chaperone homology domain AOT11_10945 SM00530 Helix-turn-helix XRE-family like proteins AOT11_10950 SM00563 Phosphate acyltransferases AOT11_11020 SM00495 Chitin-binding domain type 3 AOT11_11030 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_11030 SM01240 AOT11_11030 AOT11_11045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_11045 SM00267 diguanylate cyclase AOT11_11055 SM00173 Ras subfamily of RAS small GTPases AOT11_11055 SM00382 ATPases associated with a variety of cellular activities AOT11_11060 SM00564 beta-propeller repeat AOT11_11090 SM00562 AOT11_11090 AOT11_11115 SM00271 DnaJ molecular chaperone homology domain AOT11_11160 SM01323 AOT11_11160 AOT11_11175 SM00020 Trypsin-like serine protease AOT11_11180 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_11220 SM00382 ATPases associated with a variety of cellular activities AOT11_11250 SM00091 PAS domain AOT11_11250 SM00387 Histidine kinase-like ATPases AOT11_11250 SM00388 His Kinase A (phosphoacceptor) domain AOT11_11255 SM00448 cheY-homologous receiver domain AOT11_11255 SM00862 Transcriptional regulatory protein, C terminal AOT11_11310 SM00382 ATPases associated with a variety of cellular activities AOT11_11310 SM01086 C-terminal, D2-small domain, of ClpB protein AOT11_11320 SM00363 S4 RNA-binding domain AOT11_11335 SM00830 Chorismate mutase type II AOT11_11355 SM00382 ATPases associated with a variety of cellular activities AOT11_11370 SM00830 Chorismate mutase type II AOT11_11415 SM00448 cheY-homologous receiver domain AOT11_11415 SM00850 LytTr DNA-binding domain AOT11_11440 SM00904 Riboflavin kinase AOT11_11455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOT11_11470 SM01154 AOT11_11470 AOT11_11585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AOT11_11595 SM00927 DNA mismatch repair enzyme MutH AOT11_11630 SM00937 AOT11_11630 AOT11_11665 SM00487 DEAD-like helicases superfamily AOT11_11665 SM00490 helicase superfamily c-terminal domain AOT11_11690 SM00986 Uracil DNA glycosylase superfamily AOT11_11690 SM00987 UreE urease accessory protein, C-terminal domain AOT11_11695 SM00518 AP endonuclease family 2 AOT11_11735 SM00448 cheY-homologous receiver domain AOT11_11735 SM00862 Transcriptional regulatory protein, C terminal AOT11_11745 SM00073 Histidine Phosphotransfer domain AOT11_11745 SM00091 PAS domain AOT11_11745 SM00387 Histidine kinase-like ATPases AOT11_11745 SM00388 His Kinase A (phosphoacceptor) domain AOT11_11745 SM00448 cheY-homologous receiver domain AOT11_11750 SM00091 PAS domain AOT11_11750 SM00267 diguanylate cyclase AOT11_11755 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_11825 SM00851 MGS-like domain AOT11_11825 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOT11_11830 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AOT11_11845 SM00957 SecA DEAD-like domain AOT11_11845 SM00958 SecA preprotein cross-linking domain AOT11_11860 SM00864 Tubulin/FtsZ family, GTPase domain AOT11_11860 SM00865 Tubulin/FtsZ family, C-terminal domain AOT11_11865 SM00842 Cell division protein FtsA AOT11_11945 SM00749 bacterial OsmY and nodulation domain AOT11_11995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOT11_12000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOT11_12005 SM00434 DNA Topoisomerase IV AOT11_12010 SM00387 Histidine kinase-like ATPases AOT11_12010 SM00433 TopoisomeraseII AOT11_12050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_12060 SM00880 AOT11_12060 AOT11_12060 SM01118 AOT11_12060 AOT11_12075 SM00287 Bacterial SH3 domain homologues AOT11_12080 SM00382 ATPases associated with a variety of cellular activities AOT11_12100 SM00905 Dihydroneopterin aldolase AOT11_12105 SM01207 AOT11_12105 AOT11_12130 SM00400 zinc finger AOT11_12130 SM00493 AOT11_12130 AOT11_12130 SM00766 DNA primase DnaG DnaB-binding AOT11_12145 SM00530 Helix-turn-helix XRE-family like proteins AOT11_12160 SM00563 Phosphate acyltransferases AOT11_12175 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_12175 SM01134 AOT11_12175 AOT11_12185 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_12185 SM00895 AOT11_12185 AOT11_12190 SM00091 PAS domain AOT11_12190 SM00267 diguanylate cyclase AOT11_12220 SM00014 Acid phosphatase homologues AOT11_12230 SM00917 LeuA allosteric (dimerisation) domain AOT11_12235 SM01329 AOT11_12235 AOT11_12255 SM00271 DnaJ molecular chaperone homology domain AOT11_12275 SM00650 Ribosomal RNA adenine dimethylases AOT11_12355 SM00563 Phosphate acyltransferases AOT11_12390 SM00382 ATPases associated with a variety of cellular activities AOT11_12400 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_12420 SM00382 ATPases associated with a variety of cellular activities AOT11_12450 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_12450 SM00924 MgtE intracellular N domain AOT11_12465 SM00382 ATPases associated with a variety of cellular activities AOT11_12545 SM00382 ATPases associated with a variety of cellular activities AOT11_12630 SM00662 RNA polymerases D AOT11_12635 SM00363 S4 RNA-binding domain AOT11_12635 SM01390 AOT11_12635 AOT11_12700 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOT11_12705 SM01374 AOT11_12705 AOT11_12725 SM00322 K homology RNA-binding domain AOT11_12740 SM01382 AOT11_12740 AOT11_12740 SM01383 AOT11_12740 AOT11_12760 SM01403 AOT11_12760 AOT11_12785 SM00984 UDP binding domain AOT11_12865 SM00226 Low molecular weight phosphatase family AOT11_12945 SM00858 AOT11_12945 AOT11_13045 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AOT11_13045 SM01232 AOT11_13045 AOT11_13070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_13070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_13070 SM01049 AOT11_13070 AOT11_13110 SM00422 helix_turn_helix, mercury resistance AOT11_13180 SM00028 Tetratricopeptide repeats AOT11_13185 SM00072 Guanylate kinase homologues. AOT11_13190 SM01409 AOT11_13190 AOT11_13195 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_13195 SM00954 Region found in RelA / SpoT proteins AOT11_13205 SM00487 DEAD-like helicases superfamily AOT11_13205 SM00490 helicase superfamily c-terminal domain AOT11_13215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_13215 SM00387 Histidine kinase-like ATPases AOT11_13215 SM00388 His Kinase A (phosphoacceptor) domain AOT11_13220 SM00448 cheY-homologous receiver domain AOT11_13220 SM00862 Transcriptional regulatory protein, C terminal AOT11_13230 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_13230 SM00732 Likely ribonuclease with RNase H fold. AOT11_13310 SM00382 ATPases associated with a variety of cellular activities AOT11_13325 SM00363 S4 RNA-binding domain AOT11_13375 SM01230 AOT11_13375 AOT11_13385 SM00091 PAS domain AOT11_13385 SM00387 Histidine kinase-like ATPases AOT11_13385 SM00388 His Kinase A (phosphoacceptor) domain AOT11_13390 SM00382 ATPases associated with a variety of cellular activities AOT11_13390 SM00448 cheY-homologous receiver domain AOT11_13395 SM00052 Putative diguanylate phosphodiesterase AOT11_13395 SM00267 diguanylate cyclase AOT11_13395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_13400 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_13430 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AOT11_13430 SM00474 3'-5' exonuclease AOT11_13430 SM00475 5'-3' exonuclease AOT11_13430 SM00482 DNA polymerase A domain AOT11_13435 SM01004 Delta-aminolevulinic acid dehydratase AOT11_13565 SM00357 Cold shock protein domain AOT11_13565 SM00382 ATPases associated with a variety of cellular activities AOT11_13565 SM00959 Rho termination factor, N-terminal domain AOT11_13575 SM00487 DEAD-like helicases superfamily AOT11_13575 SM00490 helicase superfamily c-terminal domain AOT11_13595 SM00341 Helicase and RNase D C-terminal AOT11_13595 SM00487 DEAD-like helicases superfamily AOT11_13595 SM00490 helicase superfamily c-terminal domain AOT11_13595 SM00956 AOT11_13595 AOT11_13605 SM00342 helix_turn_helix, arabinose operon control protein AOT11_13660 SM00876 Biotin and Thiamin Synthesis associated domain AOT11_13820 SM00829 Enoylreductase AOT11_13870 SM00052 Putative diguanylate phosphodiesterase AOT11_13870 SM00267 diguanylate cyclase AOT11_13870 SM01079 AOT11_13870 AOT11_13880 SM00387 Histidine kinase-like ATPases AOT11_13880 SM00433 TopoisomeraseII AOT11_13890 SM00480 DNA polymerase III beta subunit AOT11_13895 SM00382 ATPases associated with a variety of cellular activities AOT11_13895 SM00760 Bacterial dnaA protein helix-turn-helix domain AOT11_13900 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_13900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOT11_13910 SM00382 ATPases associated with a variety of cellular activities AOT11_13940 SM01228 AOT11_13940 AOT11_13955 SM00470 ParB-like nuclease domain AOT11_13995 SM00382 ATPases associated with a variety of cellular activities AOT11_14015 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_14055 SM00382 ATPases associated with a variety of cellular activities AOT11_14065 SM00563 Phosphate acyltransferases AOT11_14125 SM00257 Lysin motif AOT11_14155 SM01001 AIR carboxylase AOT11_14280 SM00382 ATPases associated with a variety of cellular activities AOT11_14330 SM00220 Serine/Threonine protein kinases, catalytic domain AOT11_14340 SM00448 cheY-homologous receiver domain AOT11_14345 SM00354 helix_turn _helix lactose operon repressor AOT11_14390 SM00344 helix_turn_helix ASNC type AOT11_14395 SM00052 Putative diguanylate phosphodiesterase AOT11_14395 SM00091 PAS domain AOT11_14395 SM00267 diguanylate cyclase AOT11_14435 SM00028 Tetratricopeptide repeats AOT11_14460 SM01219 AOT11_14460 AOT11_14495 SM00052 Putative diguanylate phosphodiesterase AOT11_14495 SM00267 diguanylate cyclase AOT11_14495 SM00897 FIST N domain AOT11_14495 SM01204 AOT11_14495 AOT11_14500 SM01144 AOT11_14500 AOT11_14530 SM00052 Putative diguanylate phosphodiesterase AOT11_14535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AOT11_14540 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOT11_14595 SM00382 ATPases associated with a variety of cellular activities AOT11_14595 SM00962 SRP54-type protein, GTPase domain AOT11_14595 SM00963 SRP54-type protein, helical bundle domain AOT11_14600 SM00382 ATPases associated with a variety of cellular activities AOT11_14615 SM00450 Rhodanese Homology Domain AOT11_14640 SM00563 Phosphate acyltransferases AOT11_14690 SM00360 RNA recognition motif AOT11_14765 SM00155 Phospholipase D. Active site motifs. AOT11_14820 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AOT11_14820 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AOT11_14825 SM00649 Ribosomal protein L11/L12 AOT11_14850 SM00663 RNA polymerase I subunit A N-terminus AOT11_14885 SM00986 Uracil DNA glycosylase superfamily AOT11_14885 SM00987 UreE urease accessory protein, C-terminal domain AOT11_14905 SM00411 bacterial (prokaryotic) histone like domain AOT11_14915 SM01209 AOT11_14915 AOT11_14915 SM01210 AOT11_14915 AOT11_14920 SM00798 AICARFT/IMPCHase bienzyme AOT11_14920 SM00851 MGS-like domain AOT11_14925 SM00422 helix_turn_helix, mercury resistance AOT11_14930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_14930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_14930 SM01049 AOT11_14930 AOT11_14950 SM00878 Biotin carboxylase C-terminal domain AOT11_14970 SM00479 AOT11_14970 AOT11_14975 SM00100 Cyclic nucleotide-monophosphate binding domain AOT11_14985 SM00387 Histidine kinase-like ATPases AOT11_14985 SM00388 His Kinase A (phosphoacceptor) domain AOT11_14985 SM00448 cheY-homologous receiver domain AOT11_15015 SM00421 helix_turn_helix, Lux Regulon AOT11_15015 SM00448 cheY-homologous receiver domain AOT11_15050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_15050 SM00387 Histidine kinase-like ATPases AOT11_15050 SM00388 His Kinase A (phosphoacceptor) domain AOT11_15055 SM00448 cheY-homologous receiver domain AOT11_15055 SM00862 Transcriptional regulatory protein, C terminal AOT11_15080 SM00883 Chaperonin 10 Kd subunit AOT11_15105 SM00841 Elongation factor P, C-terminal AOT11_15105 SM01185 AOT11_15105 AOT11_15110 SM00495 Chitin-binding domain type 3 AOT11_15165 SM00971 Serine acetyltransferase, N-terminal AOT11_15180 SM00450 Rhodanese Homology Domain AOT11_15210 SM00479 AOT11_15210 AOT11_15265 SM00257 Lysin motif AOT11_15265 SM00646 AOT11_15265 AOT11_15270 SM00853 MutL C terminal dimerisation domain AOT11_15270 SM01340 AOT11_15270 AOT11_15290 SM00244 prohibitin homologues AOT11_15295 SM00244 prohibitin homologues AOT11_15305 SM00788 Adenylosuccinate synthetase AOT11_15310 SM00671 Sel1-like repeats. AOT11_15330 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_15330 SM00357 Cold shock protein domain AOT11_15330 SM00955 AOT11_15330 AOT11_15335 SM00967 RNA 2'-O ribose methyltransferase substrate binding AOT11_15380 SM01150 AOT11_15380 AOT11_15385 SM00100 Cyclic nucleotide-monophosphate binding domain AOT11_15385 SM00419 helix_turn_helix, cAMP Regulatory protein AOT11_15410 SM00382 ATPases associated with a variety of cellular activities AOT11_15445 SM00320 WD40 repeats AOT11_15485 SM00838 Elongation factor G C-terminus AOT11_15485 SM00889 Elongation factor G, domain IV AOT11_15555 SM00382 ATPases associated with a variety of cellular activities AOT11_15555 SM01086 C-terminal, D2-small domain, of ClpB protein AOT11_15570 SM00354 helix_turn _helix lactose operon repressor AOT11_15575 SM00487 DEAD-like helicases superfamily AOT11_15575 SM00490 helicase superfamily c-terminal domain AOT11_15585 SM00919 Malic enzyme, NAD binding domain AOT11_15585 SM01274 AOT11_15585 AOT11_15625 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOT11_15680 SM00965 Secretin and TonB N terminus short domain AOT11_15740 SM01005 Alanine racemase, C-terminal domain AOT11_15875 SM00897 FIST N domain AOT11_15875 SM01204 AOT11_15875 AOT11_15880 SM00091 PAS domain AOT11_15880 SM00267 diguanylate cyclase AOT11_15890 SM01018 B12 binding domain AOT11_15920 SM00421 helix_turn_helix, Lux Regulon AOT11_15930 SM00052 Putative diguanylate phosphodiesterase AOT11_15930 SM00267 diguanylate cyclase AOT11_15950 SM00965 Secretin and TonB N terminus short domain AOT11_15960 SM00028 Tetratricopeptide repeats AOT11_15965 SM00382 ATPases associated with a variety of cellular activities AOT11_16035 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_16055 SM00670 Large family of predicted nucleotide-binding domains AOT11_16060 SM00487 DEAD-like helicases superfamily AOT11_16060 SM00490 helicase superfamily c-terminal domain AOT11_16165 SM00495 Chitin-binding domain type 3 AOT11_16195 SM00354 helix_turn _helix lactose operon repressor AOT11_16205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_16250 SM00849 Metallo-beta-lactamase superfamily AOT11_16290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_16290 SM01049 AOT11_16290 AOT11_16320 SM00478 endonuclease III AOT11_16320 SM00525 AOT11_16320 AOT11_16335 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_16350 SM01152 AOT11_16350 AOT11_16380 SM00732 Likely ribonuclease with RNase H fold. AOT11_16410 SM00731 SprT homologues. AOT11_16425 SM00861 Transketolase, pyrimidine binding domain AOT11_16435 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOT11_16555 SM00838 Elongation factor G C-terminus AOT11_16565 SM00358 Double-stranded RNA binding motif AOT11_16565 SM00535 Ribonuclease III family AOT11_16600 SM00267 diguanylate cyclase AOT11_16605 SM00073 Histidine Phosphotransfer domain AOT11_16605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_16605 SM00387 Histidine kinase-like ATPases AOT11_16605 SM00388 His Kinase A (phosphoacceptor) domain AOT11_16605 SM00448 cheY-homologous receiver domain AOT11_16615 SM00954 Region found in RelA / SpoT proteins AOT11_16630 SM01192 AOT11_16630 AOT11_16630 SM01193 AOT11_16630 AOT11_16680 SM00257 Lysin motif AOT11_16690 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AOT11_16690 SM00534 ATPase domain of DNA mismatch repair MUTS family AOT11_16700 SM00382 ATPases associated with a variety of cellular activities AOT11_16710 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOT11_16780 SM00829 Enoylreductase AOT11_16810 SM01091 Transporter associated domain AOT11_16820 SM00382 ATPases associated with a variety of cellular activities AOT11_16820 SM00962 SRP54-type protein, GTPase domain AOT11_16820 SM00963 SRP54-type protein, helical bundle domain AOT11_16885 SM00644 AOT11_16885 AOT11_16890 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_16890 SM00895 AOT11_16890 AOT11_16920 SM00947 Carbonic anhydrase AOT11_16930 SM00382 ATPases associated with a variety of cellular activities AOT11_16975 SM00487 DEAD-like helicases superfamily AOT11_16975 SM00490 helicase superfamily c-terminal domain AOT11_16975 SM00847 Helicase associated domain (HA2) Add an annotation AOT11_17015 SM00938 Nitrogen regulatory protein P-II AOT11_17035 SM00382 ATPases associated with a variety of cellular activities AOT11_17045 SM01068 Putative carbohydrate binding domain AOT11_17065 SM00382 ATPases associated with a variety of cellular activities AOT11_17070 SM00382 ATPases associated with a variety of cellular activities AOT11_17090 SM00091 PAS domain AOT11_17090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_17090 SM00387 Histidine kinase-like ATPases AOT11_17090 SM00388 His Kinase A (phosphoacceptor) domain AOT11_17090 SM00448 cheY-homologous receiver domain AOT11_17160 SM01103 AOT11_17160 AOT11_17170 SM00382 ATPases associated with a variety of cellular activities AOT11_17205 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_17225 SM01387 AOT11_17225 AOT11_17245 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_17245 SM00322 K homology RNA-binding domain AOT11_17250 SM00028 Tetratricopeptide repeats AOT11_17255 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_17275 SM00052 Putative diguanylate phosphodiesterase AOT11_17275 SM00091 PAS domain AOT11_17275 SM00267 diguanylate cyclase AOT11_17300 SM00052 Putative diguanylate phosphodiesterase AOT11_17300 SM00267 diguanylate cyclase AOT11_17305 SM00267 diguanylate cyclase AOT11_17325 SM01133 AOT11_17325 AOT11_17330 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AOT11_17360 SM00382 ATPases associated with a variety of cellular activities AOT11_17365 SM00267 diguanylate cyclase AOT11_17380 SM00838 Elongation factor G C-terminus AOT11_17380 SM00889 Elongation factor G, domain IV AOT11_17390 SM00342 helix_turn_helix, arabinose operon control protein AOT11_17415 SM00858 AOT11_17415 AOT11_17465 SM00028 Tetratricopeptide repeats AOT11_17510 SM01038 Beta galactosidase small chain AOT11_17520 SM00354 helix_turn _helix lactose operon repressor AOT11_17545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_17545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_17545 SM01049 AOT11_17545 AOT11_17550 SM00354 helix_turn _helix lactose operon repressor AOT11_17590 SM00420 helix_turn_helix, Deoxyribose operon repressor AOT11_17590 SM01134 AOT11_17590 AOT11_17660 SM00925 MltA specific insert domain AOT11_17745 SM00900 AOT11_17745 AOT11_17775 SM00267 diguanylate cyclase AOT11_17775 SM00448 cheY-homologous receiver domain AOT11_17785 SM00487 DEAD-like helicases superfamily AOT11_17785 SM00490 helicase superfamily c-terminal domain AOT11_17795 SM00495 Chitin-binding domain type 3 AOT11_17795 SM00636 AOT11_17795 AOT11_17890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_17940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOT11_17950 SM00935 Outer membrane protein (OmpH-like) AOT11_17980 SM00481 DNA polymerase alpha chain like domain AOT11_17990 SM00977 TilS substrate C-terminal domain AOT11_18000 SM00938 Nitrogen regulatory protein P-II AOT11_18015 SM00257 Lysin motif AOT11_18020 SM00849 Metallo-beta-lactamase superfamily AOT11_18035 SM00479 AOT11_18035 AOT11_18120 SM00028 Tetratricopeptide repeats AOT11_18145 SM01130 AOT11_18145 AOT11_18235 SM00382 ATPases associated with a variety of cellular activities AOT11_18240 SM00387 Histidine kinase-like ATPases AOT11_18240 SM00388 His Kinase A (phosphoacceptor) domain AOT11_18245 SM00382 ATPases associated with a variety of cellular activities AOT11_18245 SM00448 cheY-homologous receiver domain AOT11_18270 SM00382 ATPases associated with a variety of cellular activities AOT11_18330 SM00382 ATPases associated with a variety of cellular activities AOT11_18330 SM00962 SRP54-type protein, GTPase domain AOT11_18345 SM00448 cheY-homologous receiver domain AOT11_18355 SM00073 Histidine Phosphotransfer domain AOT11_18355 SM00260 Two component signalling adaptor domain AOT11_18355 SM00387 Histidine kinase-like ATPases AOT11_18355 SM01231 AOT11_18355 AOT11_18360 SM00448 cheY-homologous receiver domain AOT11_18370 SM00260 Two component signalling adaptor domain AOT11_18375 SM00260 Two component signalling adaptor domain AOT11_18385 SM00382 ATPases associated with a variety of cellular activities AOT11_18470 SM00855 Phosphoglycerate mutase family AOT11_18475 SM00463 Small MutS-related domain AOT11_18510 SM00825 Beta-ketoacyl synthase AOT11_18520 SM00859 Semialdehyde dehydrogenase, NAD binding domain AOT11_18565 SM00448 cheY-homologous receiver domain AOT11_18575 SM00382 ATPases associated with a variety of cellular activities AOT11_18585 SM00493 AOT11_18585 AOT11_18600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_18600 SM00387 Histidine kinase-like ATPases AOT11_18600 SM00388 His Kinase A (phosphoacceptor) domain AOT11_18605 SM00448 cheY-homologous receiver domain AOT11_18605 SM00862 Transcriptional regulatory protein, C terminal AOT11_18655 SM00098 Alkaline phosphatase homologues AOT11_18760 SM00267 diguanylate cyclase AOT11_18770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_18770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_18780 SM00862 Transcriptional regulatory protein, C terminal AOT11_18795 SM00267 diguanylate cyclase AOT11_18800 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_18820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_18820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_18870 SM00487 DEAD-like helicases superfamily AOT11_18870 SM00490 helicase superfamily c-terminal domain AOT11_18870 SM00982 AOT11_18870 AOT11_18870 SM01058 CarD-like/TRCF domain AOT11_18885 SM00382 ATPases associated with a variety of cellular activities AOT11_18900 SM00849 Metallo-beta-lactamase superfamily AOT11_18905 SM00382 ATPases associated with a variety of cellular activities AOT11_18925 SM00267 diguanylate cyclase AOT11_18940 SM00763 PrkA AAA domain AOT11_18960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_18960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_18985 SM00382 ATPases associated with a variety of cellular activities AOT11_18990 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_18990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AOT11_19005 SM01276 AOT11_19005 AOT11_19015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_19015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_19035 SM00491 AOT11_19035 AOT11_19060 SM00357 Cold shock protein domain AOT11_19070 SM00382 ATPases associated with a variety of cellular activities AOT11_19070 SM01086 C-terminal, D2-small domain, of ClpB protein AOT11_19075 SM00316 Ribosomal protein S1-like RNA-binding domain AOT11_19105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AOT11_19105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AOT11_19105 SM00493 AOT11_19105 AOT11_19145 SM00354 helix_turn _helix lactose operon repressor AOT11_19155 SM00448 cheY-homologous receiver domain AOT11_19155 SM00862 Transcriptional regulatory protein, C terminal AOT11_19225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AOT11_19230 SM00382 ATPases associated with a variety of cellular activities AOT11_19280 SM00028 Tetratricopeptide repeats AOT11_19315 SM00387 Histidine kinase-like ATPases AOT11_19315 SM00388 His Kinase A (phosphoacceptor) domain AOT11_19315 SM00448 cheY-homologous receiver domain AOT11_19350 SM00487 DEAD-like helicases superfamily AOT11_19350 SM00490 helicase superfamily c-terminal domain AOT11_19400 SM00530 Helix-turn-helix XRE-family like proteins AOT11_19440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_19470 SM00342 helix_turn_helix, arabinose operon control protein AOT11_19485 SM00052 Putative diguanylate phosphodiesterase AOT11_19485 SM00267 diguanylate cyclase AOT11_19485 SM01049 AOT11_19485 AOT11_19490 SM00729 Elongator protein 3, MiaB family, Radical SAM AOT11_19495 SM00052 Putative diguanylate phosphodiesterase AOT11_19495 SM00091 PAS domain AOT11_19500 SM00052 Putative diguanylate phosphodiesterase AOT11_19500 SM00091 PAS domain AOT11_19550 SM00382 ATPases associated with a variety of cellular activities AOT11_19555 SM00642 Alpha-amylase domain AOT11_19560 SM00267 diguanylate cyclase AOT11_19585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_19625 SM00849 Metallo-beta-lactamase superfamily AOT11_19655 SM00387 Histidine kinase-like ATPases AOT11_19655 SM01049 AOT11_19655 AOT11_19660 SM00421 helix_turn_helix, Lux Regulon AOT11_19660 SM00448 cheY-homologous receiver domain AOT11_19665 SM00347 helix_turn_helix multiple antibiotic resistance protein AOT11_19675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_19675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_19680 SM00479 AOT11_19680 AOT11_19685 SM00100 Cyclic nucleotide-monophosphate binding domain AOT11_19685 SM00116 Domain in cystathionine beta-synthase and other proteins. AOT11_19700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_19720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_19720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_19740 SM00052 Putative diguanylate phosphodiesterase AOT11_19765 SM00387 Histidine kinase-like ATPases AOT11_19765 SM00388 His Kinase A (phosphoacceptor) domain AOT11_19765 SM00448 cheY-homologous receiver domain AOT11_19795 SM00091 PAS domain AOT11_19795 SM00382 ATPases associated with a variety of cellular activities AOT11_19820 SM00100 Cyclic nucleotide-monophosphate binding domain AOT11_19820 SM00387 Histidine kinase-like ATPases AOT11_19825 SM00448 cheY-homologous receiver domain AOT11_19830 SM00267 diguanylate cyclase AOT11_19835 SM00052 Putative diguanylate phosphodiesterase AOT11_19835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AOT11_19835 SM00267 diguanylate cyclase AOT11_19845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_19850 SM00052 Putative diguanylate phosphodiesterase AOT11_19850 SM00267 diguanylate cyclase AOT11_19875 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AOT11_19880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AOT11_19895 SM00046 Diacylglycerol kinase catalytic domain (presumed) AOT11_19930 SM00382 ATPases associated with a variety of cellular activities AOT11_19935 SM00382 ATPases associated with a variety of cellular activities AOT11_20010 SM00267 diguanylate cyclase AOT11_20025 SM00342 helix_turn_helix, arabinose operon control protein AOT11_20055 SM00267 diguanylate cyclase AOT11_20055 SM01079 AOT11_20055 AOT11_20060 SM00479 AOT11_20060 AOT11_20100 SM00858 AOT11_20100 AOT11_20135 SM00028 Tetratricopeptide repeats AOT11_20160 SM00636 AOT11_20160 AOT11_20165 SM00382 ATPases associated with a variety of cellular activities AOT11_20165 SM00487 DEAD-like helicases superfamily AOT11_20165 SM00490 helicase superfamily c-terminal domain AOT11_20165 SM00847 Helicase associated domain (HA2) Add an annotation AOT11_20235 SM00530 Helix-turn-helix XRE-family like proteins AOT11_20270 SM00267 diguanylate cyclase AOT11_20280 SM00873 B3/4 domain AOT11_20280 SM00874 tRNA synthetase B5 domain AOT11_20280 SM00896 Ferredoxin-fold anticodon binding domain AOT11_20300 SM00411 bacterial (prokaryotic) histone like domain AOT11_20330 SM00671 Sel1-like repeats. AOT11_20360 SM00020 Trypsin-like serine protease AOT11_20390 SM00345 helix_turn_helix gluconate operon transcriptional repressor AOT11_20390 SM00866 AOT11_20390 AOT11_20405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AOT11_20565 SM00978 AOT11_20565 AOT11_21025 SM00886 Stress responsive A/B Barrel Domain AOT11_21185 SM01234 AOT11_21185 AOT11_21265 SM00901 AOT11_21265 AOT11_21280 SM01034 Sensors of blue-light using FAD AOT11_21310 SM00978 AOT11_21310 AOT11_21370 SM00448 cheY-homologous receiver domain AOT11_21375 SM00267 diguanylate cyclase AOT11_21390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_21400 SM01144 AOT11_21400 AOT11_21415 SM00852 Probable molybdopterin binding domain AOT11_21425 SM00382 ATPases associated with a variety of cellular activities AOT11_21440 SM00382 ATPases associated with a variety of cellular activities AOT11_21440 SM00448 cheY-homologous receiver domain AOT11_21445 SM00387 Histidine kinase-like ATPases AOT11_21445 SM00388 His Kinase A (phosphoacceptor) domain AOT11_21460 SM00382 ATPases associated with a variety of cellular activities AOT11_21500 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AOT11_21570 SM00100 Cyclic nucleotide-monophosphate binding domain AOT11_21570 SM00419 helix_turn_helix, cAMP Regulatory protein AOT11_21620 SM00897 FIST N domain AOT11_21620 SM01204 AOT11_21620 AOT11_21625 SM00387 Histidine kinase-like ATPases AOT11_21625 SM00388 His Kinase A (phosphoacceptor) domain AOT11_21625 SM00448 cheY-homologous receiver domain AOT11_21670 SM00382 ATPases associated with a variety of cellular activities AOT11_21680 SM00981 AOT11_21680 AOT11_21710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AOT11_21710 SM00245 tail specific protease AOT11_21715 SM00945 ProQ/FINO family AOT11_21725 SM00382 ATPases associated with a variety of cellular activities AOT11_21770 SM00028 Tetratricopeptide repeats AOT11_21770 SM00267 diguanylate cyclase AOT11_21805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AOT11_21805 SM00387 Histidine kinase-like ATPases AOT11_21805 SM00388 His Kinase A (phosphoacceptor) domain AOT11_21805 SM00448 cheY-homologous receiver domain AOT11_21810 SM00382 ATPases associated with a variety of cellular activities AOT11_21810 SM00448 cheY-homologous receiver domain AOT11_21895 SM01350 AOT11_21895 AOT11_21910 SM00448 cheY-homologous receiver domain AOT11_21915 SM00091 PAS domain AOT11_21915 SM00387 Histidine kinase-like ATPases AOT11_21945 SM00421 helix_turn_helix, Lux Regulon AOT11_21975 SM00563 Phosphate acyltransferases AOT11_21995 SM00062 Bacterial periplasmic substrate-binding proteins AOT11_22010 SM00382 ATPases associated with a variety of cellular activities AOT11_22030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AOT11_22035 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AOT11_22040 SM00327 von Willebrand factor (vWF) type A domain