locus-tag class description VV208B2_00010 PF00308 Bacterial dnaA protein VV208B2_00010 PF08299 Bacterial dnaA protein helix-turn-helix VV208B2_00010 PF11638 DnaA N-terminal domain VV208B2_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain VV208B2_00020 PF02767 DNA polymerase III beta subunit, central domain VV208B2_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain VV208B2_00030 PF02463 RecF/RecN/SMC N terminal domain VV208B2_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_00040 PF18053 DNA gyrase B subunit insert domain VV208B2_00040 PF01751 Toprim domain VV208B2_00040 PF00204 DNA gyrase B VV208B2_00040 PF00986 DNA gyrase B subunit, carboxyl terminus VV208B2_00050 PF00011 Hsp20/alpha crystallin family VV208B2_00060 PF00563 EAL domain VV208B2_00060 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_00060 PF03707 Bacterial signalling protein N terminal repeat VV208B2_00070 PF00155 Aminotransferase class I and II VV208B2_00090 PF05746 DALR anticodon binding domain VV208B2_00090 PF02092 Glycyl-tRNA synthetase beta subunit VV208B2_00100 PF02091 Glycyl-tRNA synthetase alpha subunit VV208B2_00110 PF01169 Uncharacterized protein family UPF0016 VV208B2_00120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_00140 PF01206 Sulfurtransferase TusA VV208B2_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_00160 PF03466 LysR substrate binding domain VV208B2_00170 PF00107 Zinc-binding dehydrogenase VV208B2_00170 PF08240 Alcohol dehydrogenase GroES-like domain VV208B2_00180 PF02803 Thiolase, C-terminal domain VV208B2_00180 PF00108 Thiolase, N-terminal domain VV208B2_00190 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_00190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV208B2_00190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV208B2_00200 PF01205 Uncharacterized protein family UPF0029 VV208B2_00200 PF09186 Domain of unknown function (DUF1949) VV208B2_00210 PF02386 Cation transport protein VV208B2_00220 PF12724 Flavodoxin domain VV208B2_00230 PF13358 DDE superfamily endonuclease VV208B2_00260 PF03466 LysR substrate binding domain VV208B2_00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_00270 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VV208B2_00270 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VV208B2_00280 PF04380 Membrane fusogenic activity VV208B2_00290 PF00873 AcrB/AcrD/AcrF family VV208B2_00300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_00310 PF00440 Bacterial regulatory proteins, tetR family VV208B2_00320 PF13361 UvrD-like helicase C-terminal domain VV208B2_00320 PF00580 UvrD/REP helicase N-terminal domain VV208B2_00330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV208B2_00340 PF00005 ABC transporter VV208B2_00340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_00360 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_00370 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_00370 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_00440 PF03793 PASTA domain VV208B2_00440 PF00069 Protein kinase domain VV208B2_00460 PF00072 Response regulator receiver domain VV208B2_00470 PF00356 Bacterial regulatory proteins, lacI family VV208B2_00470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV208B2_00480 PF00920 Dehydratase family VV208B2_00490 PF01202 Shikimate kinase VV208B2_00500 PF02447 GntP family permease VV208B2_00510 PF01081 KDPG and KHG aldolase VV208B2_00550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV208B2_00550 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_00560 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VV208B2_00570 PF01432 Peptidase family M3 VV208B2_00580 PF01037 Lrp/AsnC ligand binding domain VV208B2_00590 PF00563 EAL domain VV208B2_00590 PF08448 PAS fold VV208B2_00590 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_00600 PF04445 Putative SAM-dependent methyltransferase VV208B2_00620 PF00892 EamA-like transporter family VV208B2_00630 PF00582 Universal stress protein family VV208B2_00640 PF00210 Ferritin-like domain VV208B2_00650 PF10625 Universal stress protein B (UspB) VV208B2_00680 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VV208B2_00690 PF02602 Uroporphyrinogen-III synthase HemD VV208B2_00700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VV208B2_00700 PF03900 Porphobilinogen deaminase, C-terminal domain VV208B2_00710 PF12633 Adenylate cyclase NT domain VV208B2_00710 PF01295 Adenylate cyclase, class-I VV208B2_00720 PF01491 Frataxin-like domain VV208B2_00730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV208B2_00730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VV208B2_00740 PF01678 Diaminopimelate epimerase VV208B2_00760 PF02899 Phage integrase, N-terminal SAM-like domain VV208B2_00760 PF00589 Phage integrase family VV208B2_00770 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_00780 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_00780 PF00563 EAL domain VV208B2_00780 PF08495 FIST N domain VV208B2_00780 PF10442 FIST C domain VV208B2_00790 PF03942 DTW domain VV208B2_00830 PF12146 Serine aminopeptidase, S33 VV208B2_00840 PF01810 LysE type translocator VV208B2_00850 PF08668 HDOD domain VV208B2_00850 PF00563 EAL domain VV208B2_00860 PF01022 Bacterial regulatory protein, arsR family VV208B2_00870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV208B2_00870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV208B2_00950 PF01914 MarC family integral membrane protein VV208B2_00980 PF00448 SRP54-type protein, GTPase domain VV208B2_00980 PF02881 SRP54-type protein, helical bundle domain VV208B2_00990 PF00005 ABC transporter VV208B2_01000 PF18075 FtsX extracellular domain VV208B2_01010 PF04542 Sigma-70 region 2 VV208B2_01010 PF00140 Sigma-70 factor, region 1.2 VV208B2_01010 PF04545 Sigma-70, region 4 VV208B2_01020 PF00581 Rhodanese-like domain VV208B2_01030 PF01694 Rhomboid family VV208B2_01030 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VV208B2_01040 PF03748 Flagellar basal body-associated protein FliL VV208B2_01050 PF04345 Chorismate lyase VV208B2_01060 PF01040 UbiA prenyltransferase family VV208B2_01070 PF01553 Acyltransferase VV208B2_01080 PF01726 LexA DNA binding domain VV208B2_01080 PF00717 Peptidase S24-like VV208B2_01100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV208B2_01100 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_01110 PF00440 Bacterial regulatory proteins, tetR family VV208B2_01160 PF02384 N-6 DNA Methylase VV208B2_01180 PF09382 RQC domain VV208B2_01180 PF16124 RecQ zinc-binding VV208B2_01180 PF00570 HRDC domain VV208B2_01180 PF00271 Helicase conserved C-terminal domain VV208B2_01180 PF00270 DEAD/DEAH box helicase VV208B2_01190 PF02481 DNA recombination-mediator protein A VV208B2_01190 PF17782 DprA winged helix domain VV208B2_01200 PF11867 Domain of unknown function (DUF3387) VV208B2_01200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VV208B2_01200 PF18766 SWI2/SNF2 ATPase VV208B2_01240 PF04002 RadC-like JAB domain VV208B2_01270 PF06803 Protein of unknown function (DUF1232) VV208B2_01350 PF05958 tRNA (Uracil-5-)-methyltransferase VV208B2_01360 PF07715 TonB-dependent Receptor Plug Domain VV208B2_01360 PF00593 TonB dependent receptor VV208B2_01380 PF01177 Asp/Glu/Hydantoin racemase VV208B2_01400 PF13091 PLD-like domain VV208B2_01420 PF01565 FAD binding domain VV208B2_01420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VV208B2_01430 PF02237 Biotin protein ligase C terminal domain VV208B2_01430 PF03099 Biotin/lipoate A/B protein ligase family VV208B2_01430 PF08279 HTH domain VV208B2_01440 PF00485 Phosphoribulokinase / Uridine kinase family VV208B2_01450 PF00009 Elongation factor Tu GTP binding domain VV208B2_01450 PF03143 Elongation factor Tu C-terminal domain VV208B2_01450 PF03144 Elongation factor Tu domain 2 VV208B2_01460 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VV208B2_01470 PF02357 Transcription termination factor nusG VV208B2_01470 PF00467 KOW motif VV208B2_01480 PF00298 Ribosomal protein L11, RNA binding domain VV208B2_01480 PF03946 Ribosomal protein L11, N-terminal domain VV208B2_01490 PF00687 Ribosomal protein L1p/L10e family VV208B2_01500 PF00466 Ribosomal protein L10 VV208B2_01510 PF00542 Ribosomal protein L7/L12 C-terminal domain VV208B2_01510 PF16320 Ribosomal protein L7/L12 dimerisation domain VV208B2_01520 PF04563 RNA polymerase beta subunit VV208B2_01520 PF04561 RNA polymerase Rpb2, domain 2 VV208B2_01520 PF04565 RNA polymerase Rpb2, domain 3 VV208B2_01520 PF10385 RNA polymerase beta subunit external 1 domain VV208B2_01520 PF04560 RNA polymerase Rpb2, domain 7 VV208B2_01520 PF00562 RNA polymerase Rpb2, domain 6 VV208B2_01530 PF04997 RNA polymerase Rpb1, domain 1 VV208B2_01530 PF00623 RNA polymerase Rpb1, domain 2 VV208B2_01530 PF04983 RNA polymerase Rpb1, domain 3 VV208B2_01530 PF05000 RNA polymerase Rpb1, domain 4 VV208B2_01530 PF04998 RNA polymerase Rpb1, domain 5 VV208B2_01540 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VV208B2_01550 PF09297 NADH pyrophosphatase zinc ribbon domain VV208B2_01550 PF00293 NUDIX domain VV208B2_01580 PF01208 Uroporphyrinogen decarboxylase (URO-D) VV208B2_01590 PF03167 Uracil DNA glycosylase superfamily VV208B2_01600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_01600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_01610 PF04222 Protein of unknown function (DUF416) VV208B2_01620 PF00571 CBS domain VV208B2_01620 PF01595 Cyclin M transmembrane N-terminal domain VV208B2_01630 PF00216 Bacterial DNA-binding protein VV208B2_01650 PF02844 Phosphoribosylglycinamide synthetase, N domain VV208B2_01650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VV208B2_01650 PF02843 Phosphoribosylglycinamide synthetase, C domain VV208B2_01660 PF01808 AICARFT/IMPCHase bienzyme VV208B2_01660 PF02142 MGS-like domain VV208B2_01670 PF13411 MerR HTH family regulatory protein VV208B2_01680 PF00672 HAMP domain VV208B2_01680 PF17200 Single Cache domain 2 VV208B2_01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_01690 PF02954 Bacterial regulatory protein, Fis family VV208B2_01700 PF01207 Dihydrouridine synthase (Dus) VV208B2_01720 PF02785 Biotin carboxylase C-terminal domain VV208B2_01720 PF00289 Biotin carboxylase, N-terminal domain VV208B2_01720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV208B2_01730 PF00364 Biotin-requiring enzyme VV208B2_01740 PF01220 Dehydroquinase class II VV208B2_01750 PF00501 AMP-binding enzyme VV208B2_01750 PF16177 Acetyl-coenzyme A synthetase N-terminus VV208B2_01750 PF13193 AMP-binding enzyme C-terminal domain VV208B2_01790 PF12832 MFS_1 like family VV208B2_01800 PF00672 HAMP domain VV208B2_01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_01800 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_01800 PF01627 Hpt domain VV208B2_01800 PF00072 Response regulator receiver domain VV208B2_01830 PF00474 Sodium:solute symporter family VV208B2_01850 PF01914 MarC family integral membrane protein VV208B2_01860 PF00072 Response regulator receiver domain VV208B2_01860 PF00196 Bacterial regulatory proteins, luxR family VV208B2_01870 PF11412 Disulphide bond corrector protein DsbC VV208B2_01870 PF02683 Cytochrome C biogenesis protein transmembrane region VV208B2_01880 PF03605 Anaerobic c4-dicarboxylate membrane transporter VV208B2_01890 PF00206 Lyase VV208B2_01890 PF10415 Fumarase C C-terminus VV208B2_01900 PF04186 FxsA cytoplasmic membrane protein VV208B2_01910 PF00588 SpoU rRNA Methylase family VV208B2_01920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV208B2_01920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV208B2_01930 PF00672 HAMP domain VV208B2_01930 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_01930 PF16527 Two-component sensor protein CpxA, periplasmic domain VV208B2_01940 PF00486 Transcriptional regulatory protein, C terminal VV208B2_01940 PF00072 Response regulator receiver domain VV208B2_01950 PF07813 LTXXQ motif family protein VV208B2_01960 PF16916 Dimerisation domain of Zinc Transporter VV208B2_01960 PF01545 Cation efflux family VV208B2_01970 PF00365 Phosphofructokinase VV208B2_01980 PF01554 MatE VV208B2_01990 PF00166 Chaperonin 10 Kd subunit VV208B2_02000 PF00118 TCP-1/cpn60 chaperonin family VV208B2_02020 PF02308 MgtC family VV208B2_02030 PF04055 Radical SAM superfamily VV208B2_02040 PF01132 Elongation factor P (EF-P) OB domain VV208B2_02040 PF08207 Elongation factor P (EF-P) KOW-like domain VV208B2_02040 PF09285 Elongation factor P, C-terminal VV208B2_02060 PF01609 Transposase DDE domain VV208B2_02060 PF13006 Insertion element 4 transposase N-terminal VV208B2_02070 PF02313 Fumarate reductase subunit D VV208B2_02080 PF02300 Fumarate reductase subunit C VV208B2_02090 PF13085 2Fe-2S iron-sulfur cluster binding domain VV208B2_02090 PF13183 4Fe-4S dicluster domain VV208B2_02100 PF00890 FAD binding domain VV208B2_02100 PF02910 Fumarate reductase flavoprotein C-term VV208B2_02110 PF00152 tRNA synthetases class II (D, K and N) VV208B2_02120 PF08360 QacR-like protein, C-terminal region VV208B2_02120 PF00440 Bacterial regulatory proteins, tetR family VV208B2_02140 PF01609 Transposase DDE domain VV208B2_02140 PF13006 Insertion element 4 transposase N-terminal VV208B2_02150 PF01551 Peptidase family M23 VV208B2_02160 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_02160 PF06426 Serine acetyltransferase, N-terminal VV208B2_02170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VV208B2_02170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VV208B2_02180 PF02556 Preprotein translocase subunit SecB VV208B2_02190 PF00581 Rhodanese-like domain VV208B2_02210 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VV208B2_02210 PF01676 Metalloenzyme superfamily VV208B2_02230 PF00939 Sodium:sulfate symporter transmembrane region VV208B2_02240 PF02666 Phosphatidylserine decarboxylase VV208B2_02250 PF03193 RsgA GTPase VV208B2_02260 PF00929 Exonuclease VV208B2_02270 PF08331 Domain of unknown function (DUF1730) VV208B2_02280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VV208B2_02290 PF01520 N-acetylmuramoyl-L-alanine amidase VV208B2_02300 PF08676 MutL C terminal dimerisation domain VV208B2_02300 PF01119 DNA mismatch repair protein, C-terminal domain VV208B2_02320 PF17209 Hfq protein VV208B2_02330 PF13167 GTP-binding GTPase N-terminal VV208B2_02330 PF16360 GTP-binding GTPase Middle Region VV208B2_02330 PF01926 50S ribosome-binding GTPase VV208B2_02340 PF12221 Bacterial membrane protein N terminal VV208B2_02340 PF01145 SPFH domain / Band 7 family VV208B2_02350 PF01145 SPFH domain / Band 7 family VV208B2_02360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VV208B2_02370 PF00709 Adenylosuccinate synthetase VV208B2_02380 PF08238 Sel1 repeat VV208B2_02390 PF00970 Oxidoreductase FAD-binding domain VV208B2_02390 PF00042 Globin VV208B2_02390 PF00175 Oxidoreductase NAD-binding domain VV208B2_02400 PF02082 Transcriptional regulator VV208B2_02410 PF01979 Amidohydrolase family VV208B2_02420 PF00575 S1 RNA binding domain VV208B2_02420 PF00773 RNB domain VV208B2_02420 PF08206 Ribonuclease B OB domain VV208B2_02420 PF08461 Ribonuclease R winged-helix domain VV208B2_02420 PF17876 Cold shock domain VV208B2_02430 PF08032 RNA 2'-O ribose methyltransferase substrate binding VV208B2_02430 PF00588 SpoU rRNA Methylase family VV208B2_02440 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_02450 PF00579 tRNA synthetases class I (W and Y) VV208B2_02480 PF00117 Glutamine amidotransferase class-I VV208B2_02490 PF00202 Aminotransferase class-III VV208B2_02500 PF04958 Arginine N-succinyltransferase beta subunit VV208B2_02510 PF00171 Aldehyde dehydrogenase family VV208B2_02530 PF00027 Cyclic nucleotide-binding domain VV208B2_02530 PF13545 Crp-like helix-turn-helix domain VV208B2_02540 PF00485 Phosphoribulokinase / Uridine kinase family VV208B2_02550 PF06794 Uncharacterised protein family (UPF0270) VV208B2_02560 PF00561 alpha/beta hydrolase fold VV208B2_02580 PF00005 ABC transporter VV208B2_02580 PF12848 ABC transporter VV208B2_02590 PF02525 Flavodoxin-like fold VV208B2_02600 PF00999 Sodium/hydrogen exchanger family VV208B2_02600 PF02254 TrkA-N domain VV208B2_02620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_02630 PF01112 Asparaginase VV208B2_02640 PF04102 SlyX VV208B2_02660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV208B2_02660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_02670 PF13309 HTH domain VV208B2_02670 PF08348 YheO-like PAS domain VV208B2_02680 PF02635 DsrE/DsrF-like family VV208B2_02690 PF02635 DsrE/DsrF-like family VV208B2_02700 PF04077 DsrH like protein VV208B2_02710 PF00164 Ribosomal protein S12/S23 VV208B2_02720 PF00177 Ribosomal protein S7p/S5e VV208B2_02730 PF14492 Elongation Factor G, domain II VV208B2_02730 PF03764 Elongation factor G, domain IV VV208B2_02730 PF00009 Elongation factor Tu GTP binding domain VV208B2_02730 PF03144 Elongation factor Tu domain 2 VV208B2_02730 PF00679 Elongation factor G C-terminus VV208B2_02740 PF00009 Elongation factor Tu GTP binding domain VV208B2_02740 PF03143 Elongation factor Tu C-terminal domain VV208B2_02740 PF03144 Elongation factor Tu domain 2 VV208B2_02750 PF04324 BFD-like [2Fe-2S] binding domain VV208B2_02760 PF00210 Ferritin-like domain VV208B2_02770 PF16363 GDP-mannose 4,6 dehydratase VV208B2_02780 PF00121 Triosephosphate isomerase VV208B2_02830 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VV208B2_02850 PF06005 Cell division protein ZapB VV208B2_02860 PF03737 Aldolase/RraA VV208B2_02870 PF01040 UbiA prenyltransferase family VV208B2_02880 PF10431 C-terminal, D2-small domain, of ClpB protein VV208B2_02880 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_02880 PF07724 AAA domain (Cdc48 subfamily) VV208B2_02890 PF00227 Proteasome subunit VV208B2_02910 PF00356 Bacterial regulatory proteins, lacI family VV208B2_02920 PF00271 Helicase conserved C-terminal domain VV208B2_02920 PF17764 3′ DNA-binding domain (3′BD) VV208B2_02920 PF18074 Primosomal protein N C-terminal domain VV208B2_02920 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VV208B2_02920 PF00270 DEAD/DEAH box helicase VV208B2_02930 PF01197 Ribosomal protein L31 VV208B2_02940 PF00390 Malic enzyme, N-terminal domain VV208B2_02940 PF03949 Malic enzyme, NAD binding domain VV208B2_02950 PF01340 Met Apo-repressor, MetJ VV208B2_02960 PF01053 Cys/Met metabolism PLP-dependent enzyme VV208B2_02970 PF03447 Homoserine dehydrogenase, NAD binding domain VV208B2_02970 PF00742 Homoserine dehydrogenase VV208B2_02970 PF00696 Amino acid kinase family VV208B2_02980 PF02219 Methylenetetrahydrofolate reductase VV208B2_03000 PF00311 Phosphoenolpyruvate carboxylase VV208B2_03010 PF07687 Peptidase dimerisation domain VV208B2_03010 PF01546 Peptidase family M20/M25/M40 VV208B2_03020 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV208B2_03020 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV208B2_03030 PF00696 Amino acid kinase family VV208B2_03040 PF00764 Arginosuccinate synthase VV208B2_03050 PF00583 Acetyltransferase (GNAT) family VV208B2_03050 PF14698 Argininosuccinate lyase C-terminal VV208B2_03050 PF00206 Lyase VV208B2_03060 PF03466 LysR substrate binding domain VV208B2_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_03070 PF00912 Transglycosylase VV208B2_03070 PF17092 Penicillin-binding protein OB-like domain VV208B2_03070 PF00905 Penicillin binding protein transpeptidase domain VV208B2_03120 PF07660 Secretin and TonB N terminus short domain VV208B2_03120 PF11741 AMIN domain VV208B2_03120 PF03958 Bacterial type II/III secretion system short domain VV208B2_03120 PF00263 Bacterial type II and III secretion system protein VV208B2_03130 PF01202 Shikimate kinase VV208B2_03140 PF01761 3-dehydroquinate synthase VV208B2_03160 PF02086 D12 class N6 adenine-specific DNA methyltransferase VV208B2_03170 PF00834 Ribulose-phosphate 3 epimerase family VV208B2_03180 PF01250 Ribosomal protein S6 VV208B2_03190 PF01084 Ribosomal protein S18 VV208B2_03200 PF03948 Ribosomal protein L9, C-terminal domain VV208B2_03200 PF01281 Ribosomal protein L9, N-terminal domain VV208B2_03220 PF03796 DnaB-like helicase C terminal domain VV208B2_03220 PF00772 DnaB-like helicase N terminal domain VV208B2_03230 PF01168 Alanine racemase, N-terminal domain VV208B2_03230 PF00842 Alanine racemase, C-terminal domain VV208B2_03250 PF01894 Uncharacterised protein family UPF0047 VV208B2_03260 PF00342 Phosphoglucose isomerase VV208B2_03280 PF01207 Dihydrouridine synthase (Dus) VV208B2_03320 PF00667 FAD binding domain VV208B2_03320 PF00258 Flavodoxin VV208B2_03320 PF00175 Oxidoreductase NAD-binding domain VV208B2_03330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VV208B2_03330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VV208B2_03340 PF01507 Phosphoadenosine phosphosulfate reductase family VV208B2_03360 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_03360 PF00072 Response regulator receiver domain VV208B2_03370 PF00999 Sodium/hydrogen exchanger family VV208B2_03380 PF00809 Pterin binding enzyme VV208B2_03380 PF02574 Homocysteine S-methyltransferase VV208B2_03380 PF02965 Vitamin B12 dependent methionine synthase, activation domain VV208B2_03380 PF02310 B12 binding domain VV208B2_03380 PF02607 B12 binding domain VV208B2_03390 PF00696 Amino acid kinase family VV208B2_03390 PF01842 ACT domain VV208B2_03400 PF00266 Aminotransferase class-V VV208B2_03420 PF00005 ABC transporter VV208B2_03420 PF17755 UvrA DNA-binding domain VV208B2_03420 PF17760 UvrA interaction domain VV208B2_03430 PF00483 Nucleotidyl transferase VV208B2_03440 PF00196 Bacterial regulatory proteins, luxR family VV208B2_03450 PF00436 Single-strand binding protein family VV208B2_03460 PF17157 Gammaproteobacterial periplasmic sensor domain VV208B2_03460 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_03460 PF00563 EAL domain VV208B2_03500 PF07660 Secretin and TonB N terminus short domain VV208B2_03500 PF03958 Bacterial type II/III secretion system short domain VV208B2_03500 PF00263 Bacterial type II and III secretion system protein VV208B2_03500 PF11741 AMIN domain VV208B2_03510 PF13401 AAA domain VV208B2_03510 PF01471 Putative peptidoglycan binding domain VV208B2_03530 PF00437 Type II/IV secretion system protein VV208B2_03530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV208B2_03540 PF00482 Type II secretion system (T2SS), protein F VV208B2_03560 PF07963 Prokaryotic N-terminal methylation motif VV208B2_03570 PF07963 Prokaryotic N-terminal methylation motif VV208B2_03640 PF04085 rod shape-determining protein MreC VV208B2_03650 PF04093 rod shape-determining protein MreD VV208B2_03660 PF02545 Maf-like protein VV208B2_03670 PF10150 Ribonuclease E/G family VV208B2_03670 PF00575 S1 RNA binding domain VV208B2_03680 PF13502 AsmA-like C-terminal region VV208B2_03680 PF13116 Protein of unknown function VV208B2_03690 PF00795 Carbon-nitrogen hydrolase VV208B2_03700 PF01523 Putative modulator of DNA gyrase VV208B2_03710 PF02562 PhoH-like protein VV208B2_03710 PF13638 PIN domain VV208B2_03720 PF00176 SNF2 family N-terminal domain VV208B2_03720 PF00271 Helicase conserved C-terminal domain VV208B2_03720 PF12137 RNA polymerase recycling family C-terminal VV208B2_03720 PF18337 RapA N-terminal Tudor like domain VV208B2_03720 PF18339 RapA N-terminal Tudor like domain 1 VV208B2_03730 PF00849 RNA pseudouridylate synthase VV208B2_03740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_03740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_03750 PF01042 Endoribonuclease L-PSP VV208B2_03760 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VV208B2_03760 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VV208B2_03770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV208B2_03770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV208B2_03780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV208B2_03780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV208B2_03800 PF06877 Regulator of ribonuclease activity B VV208B2_03820 PF00583 Acetyltransferase (GNAT) family VV208B2_03840 PF00133 tRNA synthetases class I (I, L, M and V) VV208B2_03840 PF10458 Valyl tRNA synthetase tRNA binding arm VV208B2_03840 PF08264 Anticodon-binding domain of tRNA VV208B2_03850 PF04364 DNA polymerase III chi subunit, HolC VV208B2_03860 PF02789 Cytosol aminopeptidase family, N-terminal domain VV208B2_03860 PF00883 Cytosol aminopeptidase family, catalytic domain VV208B2_03870 PF03739 Lipopolysaccharide export system permease LptF/LptG VV208B2_03880 PF03739 Lipopolysaccharide export system permease LptF/LptG VV208B2_03900 PF00589 Phage integrase family VV208B2_03900 PF02899 Phage integrase, N-terminal SAM-like domain VV208B2_03930 PF03354 Phage Terminase VV208B2_03960 PF07745 Glycosyl hydrolase family 53 VV208B2_03970 PF07745 Glycosyl hydrolase family 53 VV208B2_03980 PF00356 Bacterial regulatory proteins, lacI family VV208B2_03990 PF00005 ABC transporter VV208B2_03990 PF17912 MalK OB fold domain VV208B2_04000 PF13416 Bacterial extracellular solute-binding protein VV208B2_04010 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_04020 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_04030 PF07745 Glycosyl hydrolase family 53 VV208B2_04040 PF02449 Beta-galactosidase VV208B2_04040 PF08533 Beta-galactosidase C-terminal domain VV208B2_04040 PF08532 Beta-galactosidase trimerisation domain VV208B2_04050 PF02264 LamB porin VV208B2_04060 PF12729 Four helix bundle sensory module for signal transduction VV208B2_04060 PF00672 HAMP domain VV208B2_04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_04070 PF16363 GDP-mannose 4,6 dehydratase VV208B2_04080 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VV208B2_04080 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VV208B2_04090 PF10509 Galactokinase galactose-binding signature VV208B2_04090 PF08544 GHMP kinases C terminal VV208B2_04090 PF00288 GHMP kinases N terminal domain VV208B2_04100 PF01263 Aldose 1-epimerase VV208B2_04280 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_04280 PF08448 PAS fold VV208B2_04290 PF02743 Cache domain VV208B2_04290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_04290 PF00672 HAMP domain VV208B2_04300 PF00563 EAL domain VV208B2_04300 PF12792 CSS motif domain associated with EAL VV208B2_04310 PF13426 PAS domain VV208B2_04310 PF08447 PAS fold VV208B2_04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_04320 PF01522 Polysaccharide deacetylase VV208B2_04330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV208B2_04340 PF02378 Phosphotransferase system, EIIC VV208B2_04350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VV208B2_04360 PF02056 Family 4 glycosyl hydrolase VV208B2_04360 PF11975 Family 4 glycosyl hydrolase C-terminal domain VV208B2_04370 PF04794 YdjC-like protein VV208B2_04380 PF00356 Bacterial regulatory proteins, lacI family VV208B2_04400 PF00072 Response regulator receiver domain VV208B2_04430 PF00672 HAMP domain VV208B2_04430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_04430 PF17200 Single Cache domain 2 VV208B2_04440 PF01464 Transglycosylase SLT domain VV208B2_04440 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VV208B2_04450 PF04362 Bacterial Fe(2+) trafficking VV208B2_04460 PF00633 Helix-hairpin-helix motif VV208B2_04460 PF00730 HhH-GPD superfamily base excision DNA repair protein VV208B2_04460 PF14815 NUDIX domain VV208B2_04470 PF02390 Putative methyltransferase VV208B2_04480 PF04960 Glutaminase VV208B2_04500 PF04055 Radical SAM superfamily VV208B2_04500 PF06969 HemN C-terminal domain VV208B2_04510 PF01725 Ham1 family VV208B2_04530 PF02594 Uncharacterised ACR, YggU family COG1872 VV208B2_04540 PF02325 YGGT family VV208B2_04550 PF03807 NADP oxidoreductase coenzyme F420-dependent VV208B2_04550 PF14748 Pyrroline-5-carboxylate reductase dimerisation VV208B2_04560 PF01168 Alanine racemase, N-terminal domain VV208B2_04570 PF00437 Type II/IV secretion system protein VV208B2_04580 PF00437 Type II/IV secretion system protein VV208B2_04590 PF03652 Holliday junction resolvase VV208B2_04600 PF02622 Uncharacterized ACR, COG1678 VV208B2_04610 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VV208B2_04610 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VV208B2_04620 PF04452 RNA methyltransferase VV208B2_04640 PF04231 Endonuclease I VV208B2_04650 PF10263 SprT-like family VV208B2_04650 PF17283 SprT-like zinc ribbon domain VV208B2_04670 PF00438 S-adenosylmethionine synthetase, N-terminal domain VV208B2_04670 PF02773 S-adenosylmethionine synthetase, C-terminal domain VV208B2_04670 PF02772 S-adenosylmethionine synthetase, central domain VV208B2_04680 PF02779 Transketolase, pyrimidine binding domain VV208B2_04680 PF02780 Transketolase, C-terminal domain VV208B2_04680 PF00456 Transketolase, thiamine diphosphate binding domain VV208B2_04700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV208B2_04700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV208B2_04710 PF00162 Phosphoglycerate kinase VV208B2_04720 PF01116 Fructose-bisphosphate aldolase class-II VV208B2_04730 PF00924 Mechanosensitive ion channel VV208B2_04730 PF05552 Conserved TM helix VV208B2_04740 PF01810 LysE type translocator VV208B2_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_04750 PF03466 LysR substrate binding domain VV208B2_04770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_04770 PF01842 ACT domain VV208B2_04770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_04780 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VV208B2_04790 PF01812 5-formyltetrahydrofolate cyclo-ligase family VV208B2_04800 PF05164 Cell division protein ZapA VV208B2_04810 PF03695 Uncharacterised protein family (UPF0149) VV208B2_04820 PF01494 FAD binding domain VV208B2_04830 PF01494 FAD binding domain VV208B2_04860 PF01571 Aminomethyltransferase folate-binding domain VV208B2_04870 PF03937 Flavinator of succinate dehydrogenase VV208B2_04880 PF00890 FAD binding domain VV208B2_04880 PF02910 Fumarate reductase flavoprotein C-term VV208B2_04890 PF08281 Sigma-70, region 4 VV208B2_04890 PF04542 Sigma-70 region 2 VV208B2_04900 PF03872 Anti sigma-E protein RseA, N-terminal domain VV208B2_04900 PF03873 Anti sigma-E protein RseA, C-terminal domain VV208B2_04910 PF17188 MucB/RseB C-terminal domain VV208B2_04910 PF03888 MucB/RseB N-terminal domain VV208B2_04930 PF00679 Elongation factor G C-terminus VV208B2_04930 PF00009 Elongation factor Tu GTP binding domain VV208B2_04930 PF03144 Elongation factor Tu domain 2 VV208B2_04930 PF06421 GTP-binding protein LepA C-terminus VV208B2_04940 PF10502 Signal peptidase, peptidase S26 VV208B2_04950 PF00035 Double-stranded RNA binding motif VV208B2_04950 PF14622 Ribonuclease-III-like VV208B2_04960 PF07650 KH domain VV208B2_04960 PF01926 50S ribosome-binding GTPase VV208B2_04970 PF11967 Recombination protein O N terminal VV208B2_04970 PF02565 Recombination protein O C terminal VV208B2_04980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VV208B2_04990 PF01648 4'-phosphopantetheinyl transferase superfamily VV208B2_05020 PF00563 EAL domain VV208B2_05020 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_05020 PF03707 Bacterial signalling protein N terminal repeat VV208B2_05030 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_05030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_05030 PF00072 Response regulator receiver domain VV208B2_05030 PF01627 Hpt domain VV208B2_05030 PF00672 HAMP domain VV208B2_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_05040 PF05958 tRNA (Uracil-5-)-methyltransferase VV208B2_05040 PF01938 TRAM domain VV208B2_05050 PF02824 TGS domain VV208B2_05050 PF13291 ACT domain VV208B2_05050 PF04607 Region found in RelA / SpoT proteins VV208B2_05060 PF03819 MazG nucleotide pyrophosphohydrolase domain VV208B2_05070 PF00117 Glutamine amidotransferase class-I VV208B2_05070 PF06418 CTP synthase N-terminus VV208B2_05080 PF03952 Enolase, N-terminal domain VV208B2_05080 PF00113 Enolase, C-terminal TIM barrel domain VV208B2_05090 PF04977 Septum formation initiator VV208B2_05100 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VV208B2_05110 PF02542 YgbB family VV208B2_05120 PF01142 tRNA pseudouridine synthase D (TruD) VV208B2_05130 PF01975 Survival protein SurE VV208B2_05150 PF01476 LysM domain VV208B2_05150 PF01551 Peptidase family M23 VV208B2_05160 PF00140 Sigma-70 factor, region 1.2 VV208B2_05160 PF04542 Sigma-70 region 2 VV208B2_05160 PF04539 Sigma-70 region 3 VV208B2_05160 PF04545 Sigma-70, region 4 VV208B2_05170 PF00488 MutS domain V VV208B2_05170 PF05190 MutS family domain IV VV208B2_05170 PF05192 MutS domain III VV208B2_05170 PF05188 MutS domain II VV208B2_05170 PF01624 MutS domain I VV208B2_05180 PF02464 Competence-damaged protein VV208B2_05190 PF00154 recA bacterial DNA recombination protein VV208B2_05200 PF02631 RecX family VV208B2_05210 PF02272 DHHA1 domain VV208B2_05210 PF01411 tRNA synthetases class II (A) VV208B2_05210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV208B2_05220 PF00696 Amino acid kinase family VV208B2_05220 PF01842 ACT domain VV208B2_05220 PF13840 ACT domain VV208B2_05230 PF02599 Global regulator protein family VV208B2_05240 PF04277 Oxaloacetate decarboxylase, gamma chain VV208B2_05250 PF00364 Biotin-requiring enzyme VV208B2_05250 PF00682 HMGL-like VV208B2_05250 PF02436 Conserved carboxylase domain VV208B2_05260 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VV208B2_05270 PF08240 Alcohol dehydrogenase GroES-like domain VV208B2_05270 PF00107 Zinc-binding dehydrogenase VV208B2_05280 PF09335 SNARE associated Golgi protein VV208B2_05290 PF00675 Insulinase (Peptidase family M16) VV208B2_05290 PF05193 Peptidase M16 inactive domain VV208B2_05300 PF04262 Glutamate-cysteine ligase VV208B2_05320 PF02664 S-Ribosylhomocysteinase (LuxS) VV208B2_05330 PF00571 CBS domain VV208B2_05330 PF01595 Cyclin M transmembrane N-terminal domain VV208B2_05330 PF03471 Transporter associated domain VV208B2_05340 PF01578 Cytochrome C assembly protein VV208B2_05350 PF02978 Signal peptide binding domain VV208B2_05350 PF00448 SRP54-type protein, GTPase domain VV208B2_05350 PF02881 SRP54-type protein, helical bundle domain VV208B2_05360 PF00886 Ribosomal protein S16 VV208B2_05370 PF01782 RimM N-terminal domain VV208B2_05370 PF05239 PRC-barrel domain VV208B2_05380 PF01746 tRNA (Guanine-1)-methyltransferase VV208B2_05390 PF01245 Ribosomal protein L19 VV208B2_05400 PF03884 DNA gyrase inhibitor YacG VV208B2_05410 PF07072 Cell division protein VV208B2_05420 PF01121 Dephospho-CoA kinase VV208B2_05430 PF01478 Type IV leader peptidase family VV208B2_05430 PF06750 Bacterial Peptidase A24 N-terminal domain VV208B2_05440 PF00482 Type II secretion system (T2SS), protein F VV208B2_05450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV208B2_05450 PF00437 Type II/IV secretion system protein VV208B2_05460 PF00114 Pilin (bacterial filament) VV208B2_05460 PF07963 Prokaryotic N-terminal methylation motif VV208B2_05470 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VV208B2_05470 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VV208B2_05480 PF01510 N-acetylmuramoyl-L-alanine amidase VV208B2_05490 PF00392 Bacterial regulatory proteins, gntR family VV208B2_05490 PF07729 FCD domain VV208B2_05500 PF00456 Transketolase, thiamine diphosphate binding domain VV208B2_05500 PF17831 Pyruvate dehydrogenase E1 component middle domain VV208B2_05510 PF00364 Biotin-requiring enzyme VV208B2_05510 PF02817 e3 binding domain VV208B2_05510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV208B2_05520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV208B2_05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_05530 PF00440 Bacterial regulatory proteins, tetR family VV208B2_05540 PF00156 Phosphoribosyl transferase domain VV208B2_05550 PF00484 Carbonic anhydrase VV208B2_05560 PF01740 STAS domain VV208B2_05560 PF00916 Sulfate permease family VV208B2_05570 PF00005 ABC transporter VV208B2_05580 PF01061 ABC-2 type transporter VV208B2_05590 PF02569 Pantoate-beta-alanine ligase VV208B2_05600 PF02548 Ketopantoate hydroxymethyltransferase VV208B2_05610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV208B2_05620 PF01743 Poly A polymerase head domain VV208B2_05620 PF12627 Probable RNA and SrmB- binding site of polymerase A VV208B2_05620 PF12626 Polymerase A arginine-rich C-terminus VV208B2_05630 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV208B2_05640 PF01258 Prokaryotic dksA/traR C4-type zinc finger VV208B2_05650 PF17746 SfsA N-terminal OB domain VV208B2_05650 PF03749 Sugar fermentation stimulation protein RE domain VV208B2_05660 PF08482 ATP-dependent helicase C-terminal VV208B2_05660 PF00270 DEAD/DEAH box helicase VV208B2_05660 PF04408 Helicase associated domain (HA2) VV208B2_05660 PF00271 Helicase conserved C-terminal domain VV208B2_05670 PF00912 Transglycosylase VV208B2_05670 PF00905 Penicillin binding protein transpeptidase domain VV208B2_05670 PF14814 Bifunctional transglycosylase second domain VV208B2_05680 PF01734 Patatin-like phospholipase VV208B2_05690 PF06434 Aconitate hydratase 2 N-terminus VV208B2_05690 PF11791 Aconitate B N-terminal domain VV208B2_05690 PF00330 Aconitase family (aconitate hydratase) VV208B2_05700 PF02595 Glycerate kinase family VV208B2_05710 PF02447 GntP family permease VV208B2_05720 PF05651 Putative sugar diacid recognition VV208B2_05720 PF17853 GGDEF-like domain VV208B2_05720 PF13556 PucR C-terminal helix-turn-helix domain VV208B2_05730 PF06062 Uncharacterised protein family (UPF0231) VV208B2_05740 PF00543 Nitrogen regulatory protein P-II VV208B2_05750 PF00909 Ammonium Transporter Family VV208B2_05760 PF13416 Bacterial extracellular solute-binding protein VV208B2_05780 PF00005 ABC transporter VV208B2_05780 PF08402 TOBE domain VV208B2_05790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV208B2_05790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV208B2_05790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV208B2_05790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV208B2_05800 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VV208B2_05800 PF06165 Glycosyltransferase family 36 VV208B2_05810 PF00728 Glycosyl hydrolase family 20, catalytic domain VV208B2_05810 PF02838 Glycosyl hydrolase family 20, domain 2 VV208B2_05820 PF01869 BadF/BadG/BcrA/BcrD ATPase family VV208B2_05840 PF00005 ABC transporter VV208B2_05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_05850 PF00005 ABC transporter VV208B2_05850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_05860 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_05860 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_05870 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_05880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_05890 PF09308 LuxQ, periplasmic VV208B2_05890 PF00072 Response regulator receiver domain VV208B2_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_05890 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_05900 PF05175 Methyltransferase small domain VV208B2_05900 PF08468 Methyltransferase small domain N-terminal VV208B2_05910 PF01594 AI-2E family transporter VV208B2_05920 PF00202 Aminotransferase class-III VV208B2_05930 PF01521 Iron-sulphur cluster biosynthesis VV208B2_05940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_05950 PF00873 AcrB/AcrD/AcrF family VV208B2_05960 PF04225 Opacity-associated protein A LysM-like domain VV208B2_05960 PF01551 Peptidase family M23 VV208B2_05970 PF00579 tRNA synthetases class I (W and Y) VV208B2_05980 PF04304 Protein of unknown function (DUF454) VV208B2_05990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VV208B2_06000 PF13609 Gram-negative porin VV208B2_06010 PF03449 Transcription elongation factor, N-terminal VV208B2_06010 PF01272 Transcription elongation factor, GreA/GreB, C-term VV208B2_06020 PF01985 CRS1 / YhbY (CRM) domain VV208B2_06030 PF01728 FtsJ-like methyltransferase VV208B2_06040 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_06040 PF17862 AAA+ lid domain VV208B2_06040 PF06480 FtsH Extracellular VV208B2_06040 PF01434 Peptidase family M41 VV208B2_06050 PF00809 Pterin binding enzyme VV208B2_06060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV208B2_06060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV208B2_06060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV208B2_06060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV208B2_06070 PF03840 Preprotein translocase SecG subunit VV208B2_06080 PF17384 RimP C-terminal SH3 domain VV208B2_06080 PF02576 RimP N-terminal domain VV208B2_06090 PF08529 NusA N-terminal domain VV208B2_06090 PF00575 S1 RNA binding domain VV208B2_06090 PF13184 NusA-like KH domain VV208B2_06100 PF04760 Translation initiation factor IF-2, N-terminal region VV208B2_06100 PF08364 Bacterial translation initiation factor IF-2 associated region VV208B2_06100 PF11987 Translation-initiation factor 2 VV208B2_06100 PF00009 Elongation factor Tu GTP binding domain VV208B2_06110 PF02033 Ribosome-binding factor A VV208B2_06120 PF09157 Pseudouridine synthase II TruB, C-terminal VV208B2_06120 PF01509 TruB family pseudouridylate synthase (N terminal domain) VV208B2_06120 PF16198 tRNA pseudouridylate synthase B C-terminal domain VV208B2_06130 PF00312 Ribosomal protein S15 VV208B2_06190 PF01138 3' exoribonuclease family, domain 1 VV208B2_06190 PF03725 3' exoribonuclease family, domain 2 VV208B2_06190 PF00013 KH domain VV208B2_06190 PF00575 S1 RNA binding domain VV208B2_06190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VV208B2_06200 PF07719 Tetratricopeptide repeat VV208B2_06200 PF13181 Tetratricopeptide repeat VV208B2_06220 PF01554 MatE VV208B2_06230 PF01136 Peptidase family U32 VV208B2_06240 PF01136 Peptidase family U32 VV208B2_06250 PF03707 Bacterial signalling protein N terminal repeat VV208B2_06250 PF00563 EAL domain VV208B2_06250 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_06260 PF02036 SCP-2 sterol transfer family VV208B2_06270 PF13508 Acetyltransferase (GNAT) domain VV208B2_06290 PF00583 Acetyltransferase (GNAT) family VV208B2_06300 PF00563 EAL domain VV208B2_06300 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_06300 PF03707 Bacterial signalling protein N terminal repeat VV208B2_06310 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_06310 PF08448 PAS fold VV208B2_06320 PF00009 Elongation factor Tu GTP binding domain VV208B2_06320 PF03144 Elongation factor Tu domain 2 VV208B2_06320 PF16658 Class II release factor RF3, C-terminal domain VV208B2_06330 PF01026 TatD related DNase VV208B2_06340 PF07662 Na+ dependent nucleoside transporter C-terminus VV208B2_06340 PF01773 Na+ dependent nucleoside transporter N-terminus VV208B2_06340 PF07670 Nucleoside recognition VV208B2_06350 PF01791 DeoC/LacD family aldolase VV208B2_06360 PF02885 Glycosyl transferase family, helical bundle domain VV208B2_06360 PF00591 Glycosyl transferase family, a/b domain VV208B2_06360 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VV208B2_06370 PF01676 Metalloenzyme superfamily VV208B2_06380 PF01048 Phosphorylase superfamily VV208B2_06400 PF18429 Domain of unknown function (DUF5609) VV208B2_06420 PF18073 Rubredoxin metal binding domain VV208B2_06430 PF13426 PAS domain VV208B2_06430 PF08448 PAS fold VV208B2_06430 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_06430 PF05231 MASE1 VV208B2_06430 PF08447 PAS fold VV208B2_06430 PF00563 EAL domain VV208B2_06460 PF00679 Elongation factor G C-terminus VV208B2_06460 PF00009 Elongation factor Tu GTP binding domain VV208B2_06460 PF14492 Elongation Factor G, domain II VV208B2_06460 PF03764 Elongation factor G, domain IV VV208B2_06460 PF03144 Elongation factor Tu domain 2 VV208B2_06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_06470 PF03466 LysR substrate binding domain VV208B2_06490 PF00501 AMP-binding enzyme VV208B2_06500 PF02311 AraC-like ligand binding domain VV208B2_06500 PF12833 Helix-turn-helix domain VV208B2_06560 PF04972 BON domain VV208B2_06560 PF00263 Bacterial type II and III secretion system protein VV208B2_06560 PF13629 Pilus formation protein N terminal region VV208B2_06620 PF00437 Type II/IV secretion system protein VV208B2_06660 PF02417 Chromate transporter VV208B2_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_06670 PF03466 LysR substrate binding domain VV208B2_06700 PF01204 Trehalase VV208B2_06710 PF13520 Amino acid permease VV208B2_06720 PF13520 Amino acid permease VV208B2_06730 PF04074 YhcH/YjgK/YiaL VV208B2_06740 PF02929 Beta galactosidase small chain VV208B2_06740 PF16353 Domain of unknown function(DUF4981) VV208B2_06740 PF00703 Glycosyl hydrolases family 2 VV208B2_06740 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VV208B2_06740 PF02837 Glycosyl hydrolases family 2, sugar binding domain VV208B2_06760 PF00356 Bacterial regulatory proteins, lacI family VV208B2_06770 PF16363 GDP-mannose 4,6 dehydratase VV208B2_06780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VV208B2_06780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VV208B2_06790 PF10509 Galactokinase galactose-binding signature VV208B2_06790 PF08544 GHMP kinases C terminal VV208B2_06790 PF00288 GHMP kinases N terminal domain VV208B2_06800 PF01263 Aldose 1-epimerase VV208B2_06810 PF17200 Single Cache domain 2 VV208B2_06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_06810 PF00672 HAMP domain VV208B2_06820 PF00356 Bacterial regulatory proteins, lacI family VV208B2_06830 PF01588 Putative tRNA binding domain VV208B2_06860 PF08443 RimK-like ATP-grasp domain VV208B2_06860 PF18030 RimK PreATP-grasp domain VV208B2_06860 PF02080 TrkA-C domain VV208B2_06880 PF01544 CorA-like Mg2+ transporter protein VV208B2_06890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VV208B2_06890 PF01266 FAD dependent oxidoreductase VV208B2_06900 PF01609 Transposase DDE domain VV208B2_06900 PF13006 Insertion element 4 transposase N-terminal VV208B2_06910 PF08220 DeoR-like helix-turn-helix domain VV208B2_06910 PF00455 DeoR C terminal sensor domain VV208B2_06920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VV208B2_06920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VV208B2_06930 PF00230 Major intrinsic protein VV208B2_06940 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_06940 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VV208B2_06950 PF07130 YebG protein VV208B2_06960 PF03466 LysR substrate binding domain VV208B2_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_06980 PF00884 Sulfatase VV208B2_06980 PF11893 Domain of unknown function (DUF3413) VV208B2_06990 PF17946 RecC C-terminal domain VV208B2_07000 PF00580 UvrD/REP helicase N-terminal domain VV208B2_07000 PF12705 PD-(D/E)XK nuclease superfamily VV208B2_07000 PF13361 UvrD-like helicase C-terminal domain VV208B2_07010 PF13538 UvrD-like helicase C-terminal domain VV208B2_07030 PF00696 Amino acid kinase family VV208B2_07030 PF00583 Acetyltransferase (GNAT) family VV208B2_07050 PF03562 MltA specific insert domain VV208B2_07050 PF06725 3D domain VV208B2_07060 PF00899 ThiF family VV208B2_07070 PF02657 Fe-S metabolism associated domain VV208B2_07080 PF00266 Aminotransferase class-V VV208B2_07090 PF01965 DJ-1/PfpI family VV208B2_07100 PF08546 Ketopantoate reductase PanE/ApbA C terminal VV208B2_07100 PF02558 Ketopantoate reductase PanE/ApbA VV208B2_07110 PF03502 Nucleoside-specific channel-forming protein, Tsx VV208B2_07130 PF04545 Sigma-70, region 4 VV208B2_07130 PF04542 Sigma-70 region 2 VV208B2_07150 PF07690 Major Facilitator Superfamily VV208B2_07160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV208B2_07180 PF05175 Methyltransferase small domain VV208B2_07190 PF01722 BolA-like protein VV208B2_07200 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VV208B2_07200 PF11973 NQRA C-terminal domain VV208B2_07210 PF03116 NQR2, RnfD, RnfE family VV208B2_07220 PF04205 FMN-binding domain VV208B2_07230 PF02508 Rnf-Nqr subunit, membrane protein VV208B2_07240 PF02508 Rnf-Nqr subunit, membrane protein VV208B2_07250 PF00970 Oxidoreductase FAD-binding domain VV208B2_07250 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_07250 PF00175 Oxidoreductase NAD-binding domain VV208B2_07260 PF02424 ApbE family VV208B2_07280 PF00072 Response regulator receiver domain VV208B2_07280 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_07290 PF11799 impB/mucB/samB family C-terminal domain VV208B2_07290 PF00817 impB/mucB/samB family VV208B2_07300 PF09382 RQC domain VV208B2_07300 PF16124 RecQ zinc-binding VV208B2_07300 PF00570 HRDC domain VV208B2_07300 PF00271 Helicase conserved C-terminal domain VV208B2_07300 PF00270 DEAD/DEAH box helicase VV208B2_07320 PF00041 Fibronectin type III domain VV208B2_07320 PF00704 Glycosyl hydrolases family 18 VV208B2_07330 PF00209 Sodium:neurotransmitter symporter family VV208B2_07350 PF06786 Uncharacterised protein family (UPF0253) VV208B2_07370 PF04073 Aminoacyl-tRNA editing domain VV208B2_07370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV208B2_07370 PF03129 Anticodon binding domain VV208B2_07380 PF01980 tRNA-methyltransferase O VV208B2_07380 PF18389 TrmO C-terminal domain VV208B2_07390 PF01197 Ribosomal protein L31 VV208B2_07400 PF03806 AbgT putative transporter family VV208B2_07430 PF01370 NAD dependent epimerase/dehydratase family VV208B2_07450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VV208B2_07500 PF04287 tRNA pseudouridine synthase C VV208B2_07510 PF00849 RNA pseudouridylate synthase VV208B2_07520 PF11944 Protein of unknown function (DUF3461) VV208B2_07530 PF01966 HD domain VV208B2_07530 PF01909 Nucleotidyltransferase domain VV208B2_07530 PF08335 GlnD PII-uridylyltransferase VV208B2_07540 PF00557 Metallopeptidase family M24 VV208B2_07550 PF00318 Ribosomal protein S2 VV208B2_07560 PF00889 Elongation factor TS VV208B2_07570 PF00696 Amino acid kinase family VV208B2_07580 PF01765 Ribosome recycling factor VV208B2_07590 PF01255 Putative undecaprenyl diphosphate synthase VV208B2_07610 PF13288 DXP reductoisomerase C-terminal domain VV208B2_07610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VV208B2_07610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VV208B2_07620 PF02163 Peptidase family M50 VV208B2_07620 PF17820 PDZ domain VV208B2_07630 PF07244 Surface antigen variable number repeat VV208B2_07630 PF01103 Surface antigen VV208B2_07640 PF03938 Outer membrane protein (OmpH-like) VV208B2_07650 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_07650 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_07650 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VV208B2_07660 PF07977 FabA-like domain VV208B2_07670 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_07670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VV208B2_07680 PF02684 Lipid-A-disaccharide synthetase VV208B2_07690 PF01351 Ribonuclease HII VV208B2_07700 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV208B2_07700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV208B2_07700 PF14579 Helix-hairpin-helix motif VV208B2_07700 PF02811 PHP domain VV208B2_07700 PF01336 OB-fold nucleic acid binding domain VV208B2_07710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VV208B2_07720 PF01171 PP-loop family VV208B2_07720 PF11734 TilS substrate C-terminal domain VV208B2_07720 PF09179 TilS substrate binding domain VV208B2_07730 PF00034 Cytochrome c VV208B2_07740 PF00543 Nitrogen regulatory protein P-II VV208B2_07750 PF03372 Endonuclease/Exonuclease/phosphatase family VV208B2_07770 PF01464 Transglycosylase SLT domain VV208B2_07770 PF01476 LysM domain VV208B2_07780 PF16123 Hydroxyacylglutathione hydrolase C-terminus VV208B2_07780 PF00753 Metallo-beta-lactamase superfamily VV208B2_07790 PF08241 Methyltransferase domain VV208B2_07800 PF00075 RNase H VV208B2_07810 PF00929 Exonuclease VV208B2_07830 PF02525 Flavodoxin-like fold VV208B2_07840 PF02254 TrkA-N domain VV208B2_07840 PF00999 Sodium/hydrogen exchanger family VV208B2_07890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV208B2_07890 PF02770 Acyl-CoA dehydrogenase, middle domain VV208B2_07890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV208B2_07890 PF09317 Domain of unknown function (DUF1974) VV208B2_07900 PF13580 SIS domain VV208B2_07910 PF13230 Glutamine amidotransferases class-II VV208B2_07920 PF00551 Formyl transferase VV208B2_07930 PF02769 AIR synthase related protein, C-terminal domain VV208B2_07930 PF00586 AIR synthase related protein, N-terminal domain VV208B2_07950 PF00860 Permease family VV208B2_07980 PF03358 NADPH-dependent FMN reductase VV208B2_07990 PF03960 ArsC family VV208B2_08000 PF01435 Peptidase family M48 VV208B2_08000 PF13181 Tetratricopeptide repeat VV208B2_08020 PF01594 AI-2E family transporter VV208B2_08030 PF00578 AhpC/TSA family VV208B2_08040 PF01842 ACT domain VV208B2_08050 PF00701 Dihydrodipicolinate synthetase family VV208B2_08060 PF06804 NlpB/DapX lipoprotein VV208B2_08090 PF07687 Peptidase dimerisation domain VV208B2_08090 PF01546 Peptidase family M20/M25/M40 VV208B2_08100 PF03960 ArsC family VV208B2_08150 PF04261 Dyp-type peroxidase family VV208B2_08160 PF00700 Bacterial flagellin C-terminal helical region VV208B2_08160 PF07196 Flagellin hook IN motif VV208B2_08160 PF00669 Bacterial flagellin N-terminal helical region VV208B2_08170 PF00669 Bacterial flagellin N-terminal helical region VV208B2_08170 PF00700 Bacterial flagellin C-terminal helical region VV208B2_08170 PF07196 Flagellin hook IN motif VV208B2_08180 PF00669 Bacterial flagellin N-terminal helical region VV208B2_08180 PF07196 Flagellin hook IN motif VV208B2_08180 PF00700 Bacterial flagellin C-terminal helical region VV208B2_08190 PF03646 FlaG protein VV208B2_08200 PF07196 Flagellin hook IN motif VV208B2_08200 PF07195 Flagellar hook-associated protein 2 C-terminus VV208B2_08200 PF02465 Flagellar hook-associated protein 2 N-terminus VV208B2_08220 PF02561 Flagellar protein FliS VV208B2_08230 PF06490 Flagellar regulatory protein FleQ VV208B2_08230 PF02954 Bacterial regulatory protein, Fis family VV208B2_08230 PF00158 Sigma-54 interaction domain VV208B2_08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_08240 PF13188 PAS domain VV208B2_08240 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_08250 PF02954 Bacterial regulatory protein, Fis family VV208B2_08250 PF00072 Response regulator receiver domain VV208B2_08250 PF00158 Sigma-54 interaction domain VV208B2_08260 PF02049 Flagellar hook-basal body complex protein FliE VV208B2_08270 PF08345 Flagellar M-ring protein C-terminal VV208B2_08270 PF01514 Secretory protein of YscJ/FliF family VV208B2_08280 PF14842 FliG N-terminal domain VV208B2_08280 PF14841 FliG middle domain VV208B2_08280 PF01706 FliG C-terminal domain VV208B2_08300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV208B2_08300 PF18269 T3SS EscN ATPase C-terminal domain VV208B2_08340 PF02154 Flagellar motor switch protein FliM VV208B2_08340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV208B2_08350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV208B2_08360 PF04347 Flagellar biosynthesis protein, FliO VV208B2_08370 PF00813 FliP family VV208B2_08380 PF01313 Bacterial export proteins, family 3 VV208B2_08390 PF01311 Bacterial export proteins, family 1 VV208B2_08400 PF01312 FlhB HrpN YscU SpaS Family VV208B2_08410 PF00771 FHIPEP family VV208B2_08420 PF00448 SRP54-type protein, GTPase domain VV208B2_08430 PF10609 NUBPL iron-transfer P-loop NTPase VV208B2_08440 PF04542 Sigma-70 region 2 VV208B2_08440 PF04539 Sigma-70 region 3 VV208B2_08440 PF04545 Sigma-70, region 4 VV208B2_08450 PF00072 Response regulator receiver domain VV208B2_08460 PF04344 Chemotaxis phosphatase, CheZ VV208B2_08470 PF01584 CheW-like domain VV208B2_08470 PF00072 Response regulator receiver domain VV208B2_08470 PF02895 Signal transducing histidine kinase, homodimeric domain VV208B2_08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_08470 PF01627 Hpt domain VV208B2_08480 PF00072 Response regulator receiver domain VV208B2_08480 PF01339 CheB methylesterase VV208B2_08490 PF13614 AAA domain VV208B2_08510 PF01584 CheW-like domain VV208B2_08530 PF00005 ABC transporter VV208B2_08540 PF03379 CcmB protein VV208B2_08550 PF01578 Cytochrome C assembly protein VV208B2_08560 PF04995 Heme exporter protein D (CcmD) VV208B2_08570 PF03100 CcmE VV208B2_08580 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV208B2_08580 PF01578 Cytochrome C assembly protein VV208B2_08590 PF08534 Redoxin VV208B2_08600 PF03918 Cytochrome C biogenesis protein VV208B2_08610 PF03918 Cytochrome C biogenesis protein VV208B2_08620 PF04333 MlaA lipoprotein VV208B2_08630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV208B2_08640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV208B2_08660 PF04542 Sigma-70 region 2 VV208B2_08660 PF08281 Sigma-70, region 4 VV208B2_08670 PF02803 Thiolase, C-terminal domain VV208B2_08670 PF00108 Thiolase, N-terminal domain VV208B2_08680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV208B2_08680 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_08680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV208B2_08700 PF00675 Insulinase (Peptidase family M16) VV208B2_08700 PF05193 Peptidase M16 inactive domain VV208B2_08710 PF00300 Histidine phosphatase superfamily (branch 1) VV208B2_08720 PF01713 Smr domain VV208B2_08730 PF05175 Methyltransferase small domain VV208B2_08740 PF01264 Chorismate synthase VV208B2_08750 PF03458 UPF0126 domain VV208B2_08760 PF04315 Elongation factor P hydroxylase VV208B2_08770 PF08891 YfcL protein VV208B2_08780 PF01266 FAD dependent oxidoreductase VV208B2_08780 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VV208B2_08790 PF02801 Beta-ketoacyl synthase, C-terminal domain VV208B2_08790 PF00109 Beta-ketoacyl synthase, N-terminal domain VV208B2_08800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_08800 PF11890 Domain of unknown function (DUF3410) VV208B2_08800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_08810 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV208B2_08810 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV208B2_08830 PF01416 tRNA pseudouridine synthase VV208B2_08840 PF01039 Carboxyl transferase domain VV208B2_08840 PF17848 Acetyl-coA carboxylase zinc finger domain VV208B2_08850 PF02875 Mur ligase family, glutamate ligase domain VV208B2_08850 PF08245 Mur ligase middle domain VV208B2_08860 PF05036 Sporulation related domain VV208B2_08870 PF02674 Colicin V production protein VV208B2_08880 PF00156 Phosphoribosyl transferase domain VV208B2_08890 PF03466 LysR substrate binding domain VV208B2_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_08900 PF00072 Response regulator receiver domain VV208B2_08920 PF00156 Phosphoribosyl transferase domain VV208B2_08930 PF12170 DNA polymerase III tau subunit V interacting with alpha VV208B2_08930 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VV208B2_08930 PF12169 DNA polymerase III subunits gamma and tau domain III VV208B2_08940 PF02575 YbaB/EbfC DNA-binding family VV208B2_08950 PF13662 Toprim domain VV208B2_08950 PF02132 RecR protein VV208B2_08980 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_08980 PF00672 HAMP domain VV208B2_08990 PF00486 Transcriptional regulatory protein, C terminal VV208B2_08990 PF00072 Response regulator receiver domain VV208B2_09000 PF00230 Major intrinsic protein VV208B2_09010 PF03692 Putative zinc- or iron-chelating domain VV208B2_09020 PF03692 Putative zinc- or iron-chelating domain VV208B2_09040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_09060 PF00245 Alkaline phosphatase VV208B2_09090 PF13847 Methyltransferase domain VV208B2_09100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VV208B2_09100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VV208B2_09110 PF00571 CBS domain VV208B2_09110 PF01769 Divalent cation transporter VV208B2_09110 PF03448 MgtE intracellular N domain VV208B2_09120 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_09140 PF02743 Cache domain VV208B2_09140 PF00672 HAMP domain VV208B2_09140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_09160 PF18500 CadC C-terminal domain 1 VV208B2_09160 PF00486 Transcriptional regulatory protein, C terminal VV208B2_09180 PF13520 Amino acid permease VV208B2_09190 PF01276 Orn/Lys/Arg decarboxylase, major domain VV208B2_09190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VV208B2_09190 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VV208B2_09200 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_09210 PF00571 CBS domain VV208B2_09210 PF01743 Poly A polymerase head domain VV208B2_09220 PF00403 Heavy-metal-associated domain VV208B2_09230 PF01048 Phosphorylase superfamily VV208B2_09250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_09250 PF00672 HAMP domain VV208B2_09260 PF01230 HIT domain VV208B2_09290 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VV208B2_09290 PF13036 Peptidoglycan-synthase activator LpoB VV208B2_09310 PF05728 Uncharacterised protein family (UPF0227) VV208B2_09320 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_09350 PF02559 CarD-like/TRCF domain VV208B2_09350 PF03461 TRCF domain VV208B2_09350 PF00270 DEAD/DEAH box helicase VV208B2_09350 PF17757 UvrB interaction domain VV208B2_09350 PF00271 Helicase conserved C-terminal domain VV208B2_09370 PF12704 MacB-like periplasmic core domain VV208B2_09370 PF02687 FtsX-like permease family VV208B2_09380 PF00005 ABC transporter VV208B2_09390 PF02687 FtsX-like permease family VV208B2_09390 PF12704 MacB-like periplasmic core domain VV208B2_09410 PF00753 Metallo-beta-lactamase superfamily VV208B2_09410 PF13567 Domain of unknown function (DUF4131) VV208B2_09410 PF03772 Competence protein VV208B2_09420 PF00664 ABC transporter transmembrane region VV208B2_09420 PF00005 ABC transporter VV208B2_09430 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VV208B2_09440 PF03966 Trm112p-like protein VV208B2_09450 PF02348 Cytidylyltransferase VV208B2_09460 PF17155 Gammaproteobacterial periplasmic sensor domain VV208B2_09460 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_09470 PF04293 SpoVR like protein VV208B2_09480 PF04285 Protein of unknown function (DUF444) VV208B2_09490 PF06798 PrkA serine protein kinase C-terminal domain VV208B2_09490 PF08298 PrkA AAA domain VV208B2_09500 PF03887 YfbU domain VV208B2_09520 PF04055 Radical SAM superfamily VV208B2_09530 PF00672 HAMP domain VV208B2_09530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_09550 PF01228 Glycine radical VV208B2_09550 PF02901 Pyruvate formate lyase-like VV208B2_09580 PF00005 ABC transporter VV208B2_09590 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_09600 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_09610 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_09630 PF03372 Endonuclease/Exonuclease/phosphatase family VV208B2_09640 PF02743 Cache domain VV208B2_09640 PF00672 HAMP domain VV208B2_09640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_09650 PF10689 Protein of unknown function (DUF2496) VV208B2_09660 PF07445 Primosomal replication protein priC VV208B2_09670 PF01925 Sulfite exporter TauE/SafE VV208B2_09680 PF06733 DEAD_2 VV208B2_09680 PF13307 Helicase C-terminal domain VV208B2_09700 PF00849 RNA pseudouridylate synthase VV208B2_09710 PF03971 Monomeric isocitrate dehydrogenase VV208B2_09720 PF01609 Transposase DDE domain VV208B2_09720 PF13006 Insertion element 4 transposase N-terminal VV208B2_09730 PF00313 'Cold-shock' DNA-binding domain VV208B2_09740 PF02617 ATP-dependent Clp protease adaptor protein ClpS VV208B2_09750 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_09750 PF07724 AAA domain (Cdc48 subfamily) VV208B2_09750 PF17871 AAA lid domain VV208B2_09750 PF02861 Clp amino terminal domain, pathogenicity island component VV208B2_09750 PF10431 C-terminal, D2-small domain, of ClpB protein VV208B2_09760 PF01176 Translation initiation factor 1A / IF-1 VV208B2_09770 PF04377 Arginine-tRNA-protein transferase, C terminus VV208B2_09770 PF04376 Arginine-tRNA-protein transferase, N terminus VV208B2_09780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VV208B2_09800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV208B2_09810 PF10692 Protein of unknown function (DUF2498) VV208B2_09820 PF01396 Topoisomerase DNA binding C4 zinc finger VV208B2_09820 PF01751 Toprim domain VV208B2_09820 PF08272 Topoisomerase I zinc-ribbon-like VV208B2_09820 PF01131 DNA topoisomerase VV208B2_09830 PF00483 Nucleotidyl transferase VV208B2_09840 PF08323 Starch synthase catalytic domain VV208B2_09840 PF00534 Glycosyl transferases group 1 VV208B2_09850 PF00561 alpha/beta hydrolase fold VV208B2_09880 PF04994 TfoX C-terminal domain VV208B2_09880 PF04993 TfoX N-terminal domain VV208B2_09890 PF00356 Bacterial regulatory proteins, lacI family VV208B2_09900 PF02613 Nitrate reductase delta subunit VV208B2_09910 PF00072 Response regulator receiver domain VV208B2_09910 PF00486 Transcriptional regulatory protein, C terminal VV208B2_09920 PF02698 DUF218 domain VV208B2_09930 PF13847 Methyltransferase domain VV208B2_09940 PF17193 MukF C-terminal domain VV208B2_09940 PF17192 MukF middle domain VV208B2_09940 PF03882 MukF winged-helix domain VV208B2_09950 PF04288 MukE-like family VV208B2_09960 PF04310 MukB N-terminal VV208B2_09960 PF16330 MukB hinge domain VV208B2_09970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VV208B2_09970 PF12833 Helix-turn-helix domain VV208B2_09980 PF00171 Aldehyde dehydrogenase family VV208B2_09990 PF05199 GMC oxidoreductase VV208B2_09990 PF00732 GMC oxidoreductase VV208B2_10020 PF18030 RimK PreATP-grasp domain VV208B2_10020 PF08443 RimK-like ATP-grasp domain VV208B2_10030 PF08003 Protein of unknown function (DUF1698) VV208B2_10040 PF13649 Methyltransferase domain VV208B2_10060 PF00152 tRNA synthetases class II (D, K and N) VV208B2_10060 PF01336 OB-fold nucleic acid binding domain VV208B2_10060 PF02938 GAD domain VV208B2_10070 PF02075 Crossover junction endodeoxyribonuclease RuvC VV208B2_10080 PF00672 HAMP domain VV208B2_10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_10080 PF02203 Tar ligand binding domain homologue VV208B2_10090 PF07499 RuvA, C-terminal domain VV208B2_10090 PF01330 RuvA N terminal domain VV208B2_10100 PF05491 RuvB C-terminal winged helix domain VV208B2_10100 PF05496 Holliday junction DNA helicase RuvB P-loop domain VV208B2_10100 PF17864 RuvB AAA lid domain VV208B2_10110 PF01654 Cytochrome bd terminal oxidase subunit I VV208B2_10120 PF02322 Cytochrome bd terminal oxidase subunit II VV208B2_10140 PF03061 Thioesterase superfamily VV208B2_10150 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_10160 PF02472 Biopolymer transport protein ExbD/TolR VV208B2_10180 PF04052 TolB amino-terminal domain VV208B2_10180 PF07676 WD40-like Beta Propeller Repeat VV208B2_10190 PF00691 OmpA family VV208B2_10200 PF13174 Tetratricopeptide repeat VV208B2_10200 PF16331 TolA binding protein trimerisation VV208B2_10210 PF02445 Quinolinate synthetase A protein VV208B2_10230 PF03994 Domain of Unknown Function (DUF350) VV208B2_10250 PF03738 Glutathionylspermidine synthase preATP-grasp VV208B2_10270 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_10270 PF00072 Response regulator receiver domain VV208B2_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_10270 PF09308 LuxQ, periplasmic VV208B2_10280 PF06610 L-alanine exporter VV208B2_10370 PF02384 N-6 DNA Methylase VV208B2_10380 PF17761 DUF1016 N-terminal domain VV208B2_10380 PF06250 YhcG PDDEXK nuclease domain VV208B2_10390 PF01420 Type I restriction modification DNA specificity domain VV208B2_10410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VV208B2_10410 PF11867 Domain of unknown function (DUF3387) VV208B2_10410 PF18766 SWI2/SNF2 ATPase VV208B2_10440 PF04229 GrpB protein VV208B2_10470 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_10480 PF02743 Cache domain VV208B2_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_10480 PF00672 HAMP domain VV208B2_10500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_10500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_10510 PF03741 Integral membrane protein TerC family VV208B2_10560 PF02311 AraC-like ligand binding domain VV208B2_10560 PF12833 Helix-turn-helix domain VV208B2_10570 PF00916 Sulfate permease family VV208B2_10570 PF01740 STAS domain VV208B2_10590 PF00563 EAL domain VV208B2_10590 PF03707 Bacterial signalling protein N terminal repeat VV208B2_10590 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_10600 PF08497 Radical SAM N-terminal VV208B2_10600 PF04055 Radical SAM superfamily VV208B2_10600 PF11842 Domain of unknown function (DUF3362) VV208B2_10610 PF00563 EAL domain VV208B2_10610 PF03707 Bacterial signalling protein N terminal repeat VV208B2_10610 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_10620 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_10620 PF00563 EAL domain VV208B2_10620 PF03707 Bacterial signalling protein N terminal repeat VV208B2_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_10650 PF03466 LysR substrate binding domain VV208B2_10660 PF08267 Cobalamin-independent synthase, N-terminal domain VV208B2_10660 PF01717 Cobalamin-independent synthase, Catalytic domain VV208B2_10670 PF07085 DRTGG domain VV208B2_10670 PF01515 Phosphate acetyl/butaryl transferase VV208B2_10680 PF00871 Acetokinase family VV208B2_10690 PF04217 Protein of unknown function, DUF412 VV208B2_10710 PF02653 Branched-chain amino acid transport system / permease component VV208B2_10720 PF00005 ABC transporter VV208B2_10730 PF00128 Alpha amylase, catalytic domain VV208B2_10730 PF02903 Alpha amylase, N-terminal ig-like domain VV208B2_10740 PF00072 Response regulator receiver domain VV208B2_10740 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_10750 PF01207 Dihydrouridine synthase (Dus) VV208B2_10760 PF07516 SecA Wing and Scaffold domain VV208B2_10760 PF01043 SecA preprotein cross-linking domain VV208B2_10760 PF07517 SecA DEAD-like domain VV208B2_10760 PF02810 SEC-C motif VV208B2_10770 PF02600 Disulfide bond formation protein DsbB VV208B2_10780 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VV208B2_10790 PF07840 FadR C-terminal domain VV208B2_10790 PF00392 Bacterial regulatory proteins, gntR family VV208B2_10800 PF00925 GTP cyclohydrolase II VV208B2_10810 PF01609 Transposase DDE domain VV208B2_10810 PF13006 Insertion element 4 transposase N-terminal VV208B2_10820 PF03480 Bacterial extracellular solute-binding protein, family 7 VV208B2_10840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV208B2_10850 PF07730 Histidine kinase VV208B2_10850 PF17200 Single Cache domain 2 VV208B2_10860 PF00196 Bacterial regulatory proteins, luxR family VV208B2_10860 PF00072 Response regulator receiver domain VV208B2_10870 PF01047 MarR family VV208B2_10880 PF02028 BCCT, betaine/carnitine/choline family transporter VV208B2_10890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_10890 PF00672 HAMP domain VV208B2_10890 PF02743 Cache domain VV208B2_10930 PF00155 Aminotransferase class I and II VV208B2_10940 PF00672 HAMP domain VV208B2_10940 PF01966 HD domain VV208B2_10970 PF00392 Bacterial regulatory proteins, gntR family VV208B2_10970 PF00155 Aminotransferase class I and II VV208B2_10990 PF00152 tRNA synthetases class II (D, K and N) VV208B2_10990 PF01336 OB-fold nucleic acid binding domain VV208B2_11000 PF00672 HAMP domain VV208B2_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_11000 PF17200 Single Cache domain 2 VV208B2_11010 PF01242 6-pyruvoyl tetrahydropterin synthase VV208B2_11030 PF00563 EAL domain VV208B2_11030 PF04940 Sensors of blue-light using FAD VV208B2_11040 PF03315 Serine dehydratase beta chain VV208B2_11040 PF03313 Serine dehydratase alpha chain VV208B2_11050 PF03222 Tryptophan/tyrosine permease family VV208B2_11060 PF00293 NUDIX domain VV208B2_11080 PF00072 Response regulator receiver domain VV208B2_11080 PF09308 LuxQ, periplasmic VV208B2_11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_11080 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_11100 PF00425 chorismate binding enzyme VV208B2_11100 PF04715 Anthranilate synthase component I, N terminal region VV208B2_11130 PF04317 YcjX-like family, DUF463 VV208B2_11140 PF05128 Domain of unknown function (DUF697) VV208B2_11150 PF18024 Helix-turn-helix domain VV208B2_11150 PF13188 PAS domain VV208B2_11150 PF00158 Sigma-54 interaction domain VV208B2_11160 PF13302 Acetyltransferase (GNAT) domain VV208B2_11190 PF00939 Sodium:sulfate symporter transmembrane region VV208B2_11200 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_11200 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_11220 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_11220 PF17158 Membrane-associated sensor, integral membrane domain VV208B2_11230 PF00563 EAL domain VV208B2_11230 PF05231 MASE1 VV208B2_11250 PF01966 HD domain VV208B2_11250 PF11871 Domain of unknown function (DUF3391) VV208B2_11260 PF00563 EAL domain VV208B2_11260 PF13188 PAS domain VV208B2_11260 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_11260 PF03707 Bacterial signalling protein N terminal repeat VV208B2_11270 PF11230 Protein of unknown function (DUF3029) VV208B2_11280 PF04055 Radical SAM superfamily VV208B2_11290 PF03466 LysR substrate binding domain VV208B2_11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_11320 PF01966 HD domain VV208B2_11330 PF01734 Patatin-like phospholipase VV208B2_11350 PF00781 Diacylglycerol kinase catalytic domain VV208B2_11360 PF03222 Tryptophan/tyrosine permease family VV208B2_11370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_11380 PF00072 Response regulator receiver domain VV208B2_11390 PF00210 Ferritin-like domain VV208B2_11420 PF00005 ABC transporter VV208B2_11420 PF00664 ABC transporter transmembrane region VV208B2_11430 PF00664 ABC transporter transmembrane region VV208B2_11430 PF00005 ABC transporter VV208B2_11440 PF01235 Sodium:alanine symporter family VV208B2_11450 PF02397 Bacterial sugar transferase VV208B2_11470 PF02563 Polysaccharide biosynthesis/export protein VV208B2_11470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV208B2_11470 PF10531 SLBB domain VV208B2_11480 PF13614 AAA domain VV208B2_11520 PF00534 Glycosyl transferases group 1 VV208B2_11520 PF13439 Glycosyltransferase Family 4 VV208B2_11530 PF00534 Glycosyl transferases group 1 VV208B2_11530 PF13439 Glycosyltransferase Family 4 VV208B2_11560 PF07963 Prokaryotic N-terminal methylation motif VV208B2_11580 PF03707 Bacterial signalling protein N terminal repeat VV208B2_11580 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_11580 PF00563 EAL domain VV208B2_11610 PF00012 Hsp70 protein VV208B2_11620 PF00012 Hsp70 protein VV208B2_11640 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_11680 PF06629 MltA-interacting protein MipA VV208B2_11740 PF04972 BON domain VV208B2_11740 PF00263 Bacterial type II and III secretion system protein VV208B2_11740 PF13629 Pilus formation protein N terminal region VV208B2_11760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV208B2_11770 PF00437 Type II/IV secretion system protein VV208B2_11840 PF02525 Flavodoxin-like fold VV208B2_11860 PF00270 DEAD/DEAH box helicase VV208B2_11860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VV208B2_11860 PF00271 Helicase conserved C-terminal domain VV208B2_11860 PF04408 Helicase associated domain (HA2) VV208B2_11860 PF11898 Domain of unknown function (DUF3418) VV208B2_11910 PF00561 alpha/beta hydrolase fold VV208B2_11920 PF03280 Proteobacterial lipase chaperone protein VV208B2_11930 PF07690 Major Facilitator Superfamily VV208B2_11960 PF00672 HAMP domain VV208B2_11960 PF12729 Four helix bundle sensory module for signal transduction VV208B2_11960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_11970 PF00491 Arginase family VV208B2_11980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV208B2_11980 PF17944 Arginine decarboxylase C-terminal helical extension VV208B2_11980 PF17810 Arginine decarboxylase helical bundle domain VV208B2_12100 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_12100 PF00072 Response regulator receiver domain VV208B2_12110 PF01409 tRNA synthetases class II core domain (F) VV208B2_12110 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VV208B2_12120 PF01588 Putative tRNA binding domain VV208B2_12120 PF03147 Ferredoxin-fold anticodon binding domain VV208B2_12120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VV208B2_12120 PF03484 tRNA synthetase B5 domain VV208B2_12120 PF03483 B3/4 domain VV208B2_12130 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VV208B2_12130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VV208B2_12160 PF00216 Bacterial DNA-binding protein VV208B2_12180 PF05724 Thiopurine S-methyltransferase (TPMT) VV208B2_12190 PF02222 ATP-grasp domain VV208B2_12200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV208B2_12200 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VV208B2_12240 PF13488 Glycine zipper VV208B2_12240 PF00691 OmpA family VV208B2_12270 PF13183 4Fe-4S dicluster domain VV208B2_12270 PF01565 FAD binding domain VV208B2_12270 PF02913 FAD linked oxidases, C-terminal domain VV208B2_12290 PF00089 Trypsin VV208B2_12310 PF00221 Aromatic amino acid lyase VV208B2_12320 PF17391 Urocanase N-terminal domain VV208B2_12320 PF17392 Urocanase C-terminal domain VV208B2_12320 PF01175 Urocanase Rossmann-like domain VV208B2_12330 PF00491 Arginase family VV208B2_12340 PF01979 Amidohydrolase family VV208B2_12350 PF07702 UTRA domain VV208B2_12350 PF00392 Bacterial regulatory proteins, gntR family VV208B2_12360 PF07070 SpoOM protein VV208B2_12380 PF02824 TGS domain VV208B2_12380 PF03129 Anticodon binding domain VV208B2_12380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV208B2_12380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV208B2_12390 PF00707 Translation initiation factor IF-3, C-terminal domain VV208B2_12390 PF05198 Translation initiation factor IF-3, N-terminal domain VV208B2_12400 PF01632 Ribosomal protein L35 VV208B2_12410 PF00453 Ribosomal protein L20 VV208B2_12420 PF00589 Phage integrase family VV208B2_12420 PF13495 Phage integrase, N-terminal SAM-like domain VV208B2_12440 PF13302 Acetyltransferase (GNAT) domain VV208B2_12460 PF13302 Acetyltransferase (GNAT) domain VV208B2_12490 PF13302 Acetyltransferase (GNAT) domain VV208B2_12730 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VV208B2_12920 PF02798 Glutathione S-transferase, N-terminal domain VV208B2_12920 PF00043 Glutathione S-transferase, C-terminal domain VV208B2_12980 PF09905 DNA-binding protein VF530 VV208B2_13030 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VV208B2_13040 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VV208B2_13410 PF01554 MatE VV208B2_13420 PF00677 Lumazine binding domain VV208B2_13440 PF03881 Fructosamine kinase VV208B2_13450 PF00072 Response regulator receiver domain VV208B2_13450 PF01339 CheB methylesterase VV208B2_13460 PF05230 MASE2 domain VV208B2_13460 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_13480 PF00877 NlpC/P60 family VV208B2_13490 PF02743 Cache domain VV208B2_13490 PF00672 HAMP domain VV208B2_13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_13510 PF03942 DTW domain VV208B2_13520 PF00480 ROK family VV208B2_13540 PF03454 MoeA C-terminal region (domain IV) VV208B2_13540 PF00994 Probable molybdopterin binding domain VV208B2_13540 PF03453 MoeA N-terminal region (domain I and II) VV208B2_13550 PF12804 MobA-like NTP transferase domain VV208B2_13560 PF00005 ABC transporter VV208B2_13560 PF08402 TOBE domain VV208B2_13570 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_13580 PF12849 PBP superfamily domain VV208B2_13590 PF00072 Response regulator receiver domain VV208B2_13590 PF00158 Sigma-54 interaction domain VV208B2_13590 PF02954 Bacterial regulatory protein, Fis family VV208B2_13600 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_13600 PF00989 PAS fold VV208B2_13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_13630 PF12848 ABC transporter VV208B2_13630 PF00005 ABC transporter VV208B2_13640 PF00672 HAMP domain VV208B2_13640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_13640 PF02743 Cache domain VV208B2_13650 PF02634 FdhD/NarQ family VV208B2_13710 PF00384 Molybdopterin oxidoreductase VV208B2_13710 PF01568 Molydopterin dinucleotide binding domain VV208B2_13710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV208B2_13720 PF13247 4Fe-4S dicluster domain VV208B2_13780 PF00909 Ammonium Transporter Family VV208B2_13790 PF02146 Sir2 family VV208B2_13800 PF13416 Bacterial extracellular solute-binding protein VV208B2_13810 PF13416 Bacterial extracellular solute-binding protein VV208B2_13820 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_13830 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_13840 PF08402 TOBE domain VV208B2_13840 PF00005 ABC transporter VV208B2_13860 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV208B2_13880 PF01171 PP-loop family VV208B2_13890 PF00582 Universal stress protein family VV208B2_13900 PF13545 Crp-like helix-turn-helix domain VV208B2_13900 PF00027 Cyclic nucleotide-binding domain VV208B2_13930 PF00403 Heavy-metal-associated domain VV208B2_13950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV208B2_13950 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VV208B2_13980 PF00115 Cytochrome C and Quinol oxidase polypeptide I VV208B2_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_14010 PF09308 LuxQ, periplasmic VV208B2_14010 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_14010 PF00072 Response regulator receiver domain VV208B2_14050 PF05840 Bacteriophage replication gene A protein (GPA) VV208B2_14110 PF00263 Bacterial type II and III secretion system protein VV208B2_14110 PF03958 Bacterial type II/III secretion system short domain VV208B2_14170 PF06303 MatP N-terminal domain VV208B2_14170 PF17414 MatP C-terminal ribbon-helix-helix domain VV208B2_14180 PF13654 AAA domain VV208B2_14180 PF05362 Lon protease (S16) C-terminal proteolytic domain VV208B2_14190 PF07977 FabA-like domain VV208B2_14200 PF04957 Ribosome modulation factor VV208B2_14220 PF00005 ABC transporter VV208B2_14220 PF16326 ABC transporter C-terminal domain VV208B2_14220 PF12848 ABC transporter VV208B2_14240 PF01170 Putative RNA methylase family UPF0020 VV208B2_14240 PF10672 S-adenosylmethionine-dependent methyltransferase VV208B2_14240 PF02926 THUMP domain VV208B2_14250 PF07126 Cell-division protein ZapC VV208B2_14260 PF01180 Dihydroorotate dehydrogenase VV208B2_14270 PF05088 Bacterial NAD-glutamate dehydrogenase VV208B2_14290 PF01433 Peptidase family M1 domain VV208B2_14290 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VV208B2_14290 PF11940 Domain of unknown function (DUF3458) Ig-like fold VV208B2_14310 PF17804 Tail specific protease N-terminal domain VV208B2_14310 PF11818 C-terminal domain of tail specific protease (DUF3340) VV208B2_14310 PF00595 PDZ domain VV208B2_14310 PF03572 Peptidase family S41 VV208B2_14320 PF17516 ProQ C-terminal domain VV208B2_14320 PF04352 ProQ/FINO family VV208B2_14330 PF13185 GAF domain VV208B2_14340 PF00005 ABC transporter VV208B2_14340 PF00664 ABC transporter transmembrane region VV208B2_14350 PF04403 Paraquat-inducible protein A VV208B2_14360 PF02470 MlaD protein VV208B2_14370 PF01189 16S rRNA methyltransferase RsmB/F VV208B2_14370 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VV208B2_14370 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VV208B2_14380 PF13509 S1 domain VV208B2_14380 PF17783 CvfB-like winged helix domain VV208B2_14410 PF00793 DAHP synthetase I family VV208B2_14420 PF04461 Protein of unknown function (DUF520) VV208B2_14430 PF17158 Membrane-associated sensor, integral membrane domain VV208B2_14430 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_14440 PF14743 DNA ligase OB-like domain VV208B2_14440 PF01068 ATP dependent DNA ligase domain VV208B2_14450 PF01740 STAS domain VV208B2_14470 PF02563 Polysaccharide biosynthesis/export protein VV208B2_14470 PF10531 SLBB domain VV208B2_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_14500 PF00072 Response regulator receiver domain VV208B2_14500 PF01627 Hpt domain VV208B2_14500 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_14500 PF00672 HAMP domain VV208B2_14500 PF17149 Periplasmic sensor domain found in signal transduction proteins VV208B2_14510 PF00072 Response regulator receiver domain VV208B2_14510 PF00158 Sigma-54 interaction domain VV208B2_14510 PF02954 Bacterial regulatory protein, Fis family VV208B2_14600 PF00534 Glycosyl transferases group 1 VV208B2_14600 PF13439 Glycosyltransferase Family 4 VV208B2_14620 PF02397 Bacterial sugar transferase VV208B2_14690 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VV208B2_14690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV208B2_14700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VV208B2_14710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VV208B2_14710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VV208B2_14720 PF12431 Transcriptional regulator VV208B2_14720 PF00072 Response regulator receiver domain VV208B2_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_14730 PF00989 PAS fold VV208B2_14730 PF17203 Single cache domain 3 VV208B2_14730 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VV208B2_14760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_14820 PF01235 Sodium:alanine symporter family VV208B2_14850 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VV208B2_14860 PF01553 Acyltransferase VV208B2_14870 PF13237 4Fe-4S dicluster domain VV208B2_14870 PF12801 4Fe-4S binding domain VV208B2_14880 PF12838 4Fe-4S dicluster domain VV208B2_14880 PF12800 4Fe-4S binding domain VV208B2_14890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV208B2_14890 PF14824 Sirohaem biosynthesis protein central VV208B2_14890 PF10414 Sirohaem synthase dimerisation region VV208B2_14900 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_14910 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_14920 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_14930 PF00005 ABC transporter VV208B2_14940 PF01027 Inhibitor of apoptosis-promoting Bax1 VV208B2_14960 PF04358 DsrC like protein VV208B2_14970 PF00708 Acylphosphatase VV208B2_14980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_14980 PF00672 HAMP domain VV208B2_14980 PF02743 Cache domain VV208B2_14990 PF17785 PUA-like domain VV208B2_14990 PF10672 S-adenosylmethionine-dependent methyltransferase VV208B2_15040 PF17151 Periplasmic sensor domain VV208B2_15040 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_15050 PF06508 Queuosine biosynthesis protein QueC VV208B2_15060 PF04055 Radical SAM superfamily VV208B2_15080 PF02743 Cache domain VV208B2_15080 PF00672 HAMP domain VV208B2_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_15100 PF00089 Trypsin VV208B2_15130 PF16177 Acetyl-coenzyme A synthetase N-terminus VV208B2_15130 PF00501 AMP-binding enzyme VV208B2_15130 PF13193 AMP-binding enzyme C-terminal domain VV208B2_15140 PF04303 PrpF protein VV208B2_15150 PF00694 Aconitase C-terminal domain VV208B2_15150 PF00330 Aconitase family (aconitate hydratase) VV208B2_15160 PF00285 Citrate synthase, C-terminal domain VV208B2_15230 PF01970 Tripartite tricarboxylate transporter TctA family VV208B2_15280 PF00072 Response regulator receiver domain VV208B2_15280 PF00196 Bacterial regulatory proteins, luxR family VV208B2_15300 PF01925 Sulfite exporter TauE/SafE VV208B2_15310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_15310 PF00672 HAMP domain VV208B2_15310 PF02743 Cache domain VV208B2_15320 PF00072 Response regulator receiver domain VV208B2_15330 PF13416 Bacterial extracellular solute-binding protein VV208B2_15340 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_15350 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_15360 PF17912 MalK OB fold domain VV208B2_15360 PF00005 ABC transporter VV208B2_15370 PF08220 DeoR-like helix-turn-helix domain VV208B2_15370 PF00455 DeoR C terminal sensor domain VV208B2_15380 PF03009 Glycerophosphoryl diester phosphodiesterase family VV208B2_15390 PF00141 Peroxidase VV208B2_15400 PF00313 'Cold-shock' DNA-binding domain VV208B2_15410 PF00072 Response regulator receiver domain VV208B2_15410 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_15460 PF14497 Glutathione S-transferase, C-terminal domain VV208B2_15460 PF02798 Glutathione S-transferase, N-terminal domain VV208B2_15480 PF04209 homogentisate 1,2-dioxygenase VV208B2_15490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_15500 PF01546 Peptidase family M20/M25/M40 VV208B2_15500 PF07687 Peptidase dimerisation domain VV208B2_15510 PF00149 Calcineurin-like phosphoesterase VV208B2_15510 PF02872 5'-nucleotidase, C-terminal domain VV208B2_15520 PF04204 Homoserine O-succinyltransferase VV208B2_15550 PF05971 RNA methyltransferase VV208B2_15560 PF01863 Protein of unknown function DUF45 VV208B2_15590 PF03466 LysR substrate binding domain VV208B2_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_15600 PF07690 Major Facilitator Superfamily VV208B2_15630 PF00005 ABC transporter VV208B2_15640 PF01032 FecCD transport family VV208B2_15650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VV208B2_15680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VV208B2_15690 PF02654 Cobalamin-5-phosphate synthase VV208B2_15700 PF02277 Phosphoribosyltransferase VV208B2_15720 PF08411 Exonuclease C-terminal VV208B2_15720 PF00929 Exonuclease VV208B2_15730 PF03788 LrgA family VV208B2_15740 PF04172 LrgB-like family VV208B2_15760 PF01259 SAICAR synthetase VV208B2_15780 PF02253 Phospholipase A1 VV208B2_15790 PF08482 ATP-dependent helicase C-terminal VV208B2_15790 PF00271 Helicase conserved C-terminal domain VV208B2_15790 PF04408 Helicase associated domain (HA2) VV208B2_15790 PF00270 DEAD/DEAH box helicase VV208B2_15800 PF03949 Malic enzyme, NAD binding domain VV208B2_15800 PF00390 Malic enzyme, N-terminal domain VV208B2_15810 PF02698 DUF218 domain VV208B2_15820 PF00939 Sodium:sulfate symporter transmembrane region VV208B2_15830 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_15830 PF00072 Response regulator receiver domain VV208B2_15850 PF00266 Aminotransferase class-V VV208B2_15870 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_15880 PF00664 ABC transporter transmembrane region VV208B2_15880 PF00005 ABC transporter VV208B2_15890 PF00005 ABC transporter VV208B2_15890 PF00664 ABC transporter transmembrane region VV208B2_15900 PF00266 Aminotransferase class-V VV208B2_15920 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_15920 PF00989 PAS fold VV208B2_15920 PF13188 PAS domain VV208B2_15920 PF13426 PAS domain VV208B2_15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_15950 PF04994 TfoX C-terminal domain VV208B2_15950 PF04993 TfoX N-terminal domain VV208B2_15970 PF03956 Lysine exporter LysO VV208B2_15990 PF00282 Pyridoxal-dependent decarboxylase conserved domain VV208B2_16000 PF01418 Helix-turn-helix domain, rpiR family VV208B2_16000 PF01380 SIS domain VV208B2_16010 PF00465 Iron-containing alcohol dehydrogenase VV208B2_16020 PF00462 Glutaredoxin VV208B2_16030 PF06826 Predicted Permease Membrane Region VV208B2_16030 PF02080 TrkA-C domain VV208B2_16040 PF07055 Enoyl reductase FAD binding domain VV208B2_16040 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VV208B2_16040 PF12241 Trans-2-enoyl-CoA reductase catalytic region VV208B2_16050 PF02770 Acyl-CoA dehydrogenase, middle domain VV208B2_16050 PF09317 Domain of unknown function (DUF1974) VV208B2_16050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV208B2_16050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV208B2_16070 PF06965 Na+/H+ antiporter 1 VV208B2_16100 PF00005 ABC transporter VV208B2_16110 PF11066 Protein of unknown function (DUF2867) VV208B2_16110 PF13460 NAD(P)H-binding VV208B2_16120 PF00999 Sodium/hydrogen exchanger family VV208B2_16140 PF07690 Major Facilitator Superfamily VV208B2_16150 PF00849 RNA pseudouridylate synthase VV208B2_16150 PF01479 S4 domain VV208B2_16160 PF00271 Helicase conserved C-terminal domain VV208B2_16160 PF04851 Type III restriction enzyme, res subunit VV208B2_16180 PF00486 Transcriptional regulatory protein, C terminal VV208B2_16180 PF00072 Response regulator receiver domain VV208B2_16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_16190 PF00672 HAMP domain VV208B2_16190 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_16200 PF01386 Ribosomal L25p family VV208B2_16230 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_16230 PF00563 EAL domain VV208B2_16230 PF03707 Bacterial signalling protein N terminal repeat VV208B2_16250 PF06945 Protein of unknown function (DUF1289) VV208B2_16270 PF13416 Bacterial extracellular solute-binding protein VV208B2_16280 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_16290 PF00005 ABC transporter VV208B2_16300 PF01066 CDP-alcohol phosphatidyltransferase VV208B2_16310 PF00158 Sigma-54 interaction domain VV208B2_16310 PF01590 GAF domain VV208B2_16320 PF03063 Prismane/CO dehydrogenase family VV208B2_16330 PF00970 Oxidoreductase FAD-binding domain VV208B2_16330 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_16330 PF00175 Oxidoreductase NAD-binding domain VV208B2_16350 PF00849 RNA pseudouridylate synthase VV208B2_16360 PF12729 Four helix bundle sensory module for signal transduction VV208B2_16360 PF00672 HAMP domain VV208B2_16360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_16370 PF01609 Transposase DDE domain VV208B2_16370 PF13006 Insertion element 4 transposase N-terminal VV208B2_16380 PF00209 Sodium:neurotransmitter symporter family VV208B2_16390 PF13396 Phospholipase_D-nuclease N-terminal VV208B2_16390 PF13091 PLD-like domain VV208B2_16400 PF01053 Cys/Met metabolism PLP-dependent enzyme VV208B2_16410 PF03352 Methyladenine glycosylase VV208B2_16420 PF00873 AcrB/AcrD/AcrF family VV208B2_16430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_16450 PF04024 PspC domain VV208B2_16460 PF06667 Phage shock protein B VV208B2_16470 PF04012 PspA/IM30 family VV208B2_16480 PF02954 Bacterial regulatory protein, Fis family VV208B2_16480 PF00158 Sigma-54 interaction domain VV208B2_16490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_16500 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_16510 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_16510 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_16520 PF00005 ABC transporter VV208B2_16520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_16530 PF00005 ABC transporter VV208B2_16560 PF01368 DHH family VV208B2_16560 PF02833 DHHA2 domain VV208B2_16580 PF16874 Glycosyl hydrolase family 36 C-terminal domain VV208B2_16580 PF16875 Glycosyl hydrolase family 36 N-terminal domain VV208B2_16630 PF18364 Molybdopterin oxidoreductase N-terminal domain VV208B2_16630 PF01568 Molydopterin dinucleotide binding domain VV208B2_16630 PF00384 Molybdopterin oxidoreductase VV208B2_16640 PF03264 NapC/NirT cytochrome c family, N-terminal region VV208B2_16650 PF03649 Uncharacterised protein family (UPF0014) VV208B2_16660 PF01226 Formate/nitrite transporter VV208B2_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_16700 PF03466 LysR substrate binding domain VV208B2_16710 PF01370 NAD dependent epimerase/dehydratase family VV208B2_16730 PF00265 Thymidine kinase VV208B2_16740 PF09190 DALR domain VV208B2_16740 PF01406 tRNA synthetases class I (C) catalytic domain VV208B2_16750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV208B2_16760 PF00149 Calcineurin-like phosphoesterase VV208B2_16770 PF00563 EAL domain VV208B2_16770 PF08668 HDOD domain VV208B2_16780 PF02810 SEC-C motif VV208B2_16790 PF01502 Phosphoribosyl-AMP cyclohydrolase VV208B2_16790 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VV208B2_16800 PF00977 Histidine biosynthesis protein VV208B2_16810 PF00977 Histidine biosynthesis protein VV208B2_16820 PF00117 Glutamine amidotransferase class-I VV208B2_16830 PF00475 Imidazoleglycerol-phosphate dehydratase VV208B2_16830 PF08645 Polynucleotide kinase 3 phosphatase VV208B2_16840 PF00155 Aminotransferase class I and II VV208B2_16850 PF00815 Histidinol dehydrogenase VV208B2_16860 PF01634 ATP phosphoribosyltransferase VV208B2_16860 PF08029 HisG, C-terminal domain VV208B2_16870 PF03553 Na+/H+ antiporter family VV208B2_16880 PF00816 H-NS histone family VV208B2_16890 PF00294 pfkB family carbohydrate kinase VV208B2_16920 PF04356 Protein of unknown function (DUF489) VV208B2_16930 PF08328 Adenylosuccinate lyase C-terminal VV208B2_16930 PF00206 Lyase VV208B2_17010 PF00106 short chain dehydrogenase VV208B2_17030 PF01435 Peptidase family M48 VV208B2_17060 PF08241 Methyltransferase domain VV208B2_17070 PF00155 Aminotransferase class I and II VV208B2_17080 PF06968 Biotin and Thiamin Synthesis associated domain VV208B2_17080 PF04055 Radical SAM superfamily VV208B2_17090 PF00202 Aminotransferase class-III VV208B2_17100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV208B2_17100 PF02403 Seryl-tRNA synthetase N-terminal domain VV208B2_17110 PF12002 MgsA AAA+ ATPase C terminal VV208B2_17110 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_17110 PF16193 AAA C-terminal domain VV208B2_17120 PF03548 Outer membrane lipoprotein carrier protein LolA VV208B2_17130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VV208B2_17130 PF17854 FtsK alpha domain VV208B2_17130 PF09397 Ftsk gamma domain VV208B2_17130 PF01580 FtsK/SpoIIIE family VV208B2_17140 PF01037 Lrp/AsnC ligand binding domain VV208B2_17150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VV208B2_17150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VV208B2_17170 PF03466 LysR substrate binding domain VV208B2_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_17190 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VV208B2_17200 PF01609 Transposase DDE domain VV208B2_17200 PF13006 Insertion element 4 transposase N-terminal VV208B2_17230 PF00753 Metallo-beta-lactamase superfamily VV208B2_17240 PF05951 Bacterial protein of unknown function (DUF882) VV208B2_17250 PF01471 Putative peptidoglycan binding domain VV208B2_17250 PF03734 L,D-transpeptidase catalytic domain VV208B2_17300 PF13006 Insertion element 4 transposase N-terminal VV208B2_17300 PF01609 Transposase DDE domain VV208B2_17330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_17330 PF00005 ABC transporter VV208B2_17340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_17340 PF00005 ABC transporter VV208B2_17350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_17360 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_17360 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_17370 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_17380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VV208B2_17390 PF18073 Rubredoxin metal binding domain VV208B2_17400 PF06305 Lipopolysaccharide assembly protein A domain VV208B2_17410 PF00216 Bacterial DNA-binding protein VV208B2_17420 PF00575 S1 RNA binding domain VV208B2_17430 PF02224 Cytidylate kinase VV208B2_17440 PF08496 Peptidase family S49 N-terminal VV208B2_17440 PF01343 Peptidase family S49 VV208B2_17450 PF00106 short chain dehydrogenase VV208B2_17480 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV208B2_17480 PF01336 OB-fold nucleic acid binding domain VV208B2_17480 PF02811 PHP domain VV208B2_17480 PF14579 Helix-hairpin-helix motif VV208B2_17480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV208B2_17490 PF01584 CheW-like domain VV208B2_17490 PF00072 Response regulator receiver domain VV208B2_17500 PF00480 ROK family VV208B2_17510 PF02887 Pyruvate kinase, alpha/beta domain VV208B2_17510 PF00224 Pyruvate kinase, barrel domain VV208B2_17520 PF01734 Patatin-like phospholipase VV208B2_17540 PF00209 Sodium:neurotransmitter symporter family VV208B2_17560 PF00367 phosphotransferase system, EIIB VV208B2_17560 PF02378 Phosphotransferase system, EIIC VV208B2_17570 PF01026 TatD related DNase VV208B2_17580 PF09115 DNA polymerase III, delta subunit, C terminal VV208B2_17590 PF02223 Thymidylate kinase VV208B2_17600 PF02618 YceG-like family VV208B2_17610 PF01063 Amino-transferase class IV VV208B2_17620 PF00109 Beta-ketoacyl synthase, N-terminal domain VV208B2_17620 PF02801 Beta-ketoacyl synthase, C-terminal domain VV208B2_17630 PF00550 Phosphopantetheine attachment site VV208B2_17650 PF00698 Acyl transferase domain VV208B2_17660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VV208B2_17660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VV208B2_17670 PF02504 Fatty acid synthesis protein VV208B2_17680 PF01783 Ribosomal L32p protein family VV208B2_17690 PF02620 Large ribosomal RNA subunit accumulation protein YceD VV208B2_17700 PF02545 Maf-like protein VV208B2_17710 PF01479 S4 domain VV208B2_17710 PF00849 RNA pseudouridylate synthase VV208B2_17720 PF10150 Ribonuclease E/G family VV208B2_17720 PF12111 Polyribonucleotide phosphorylase C terminal VV208B2_17720 PF00575 S1 RNA binding domain VV208B2_17730 PF01740 STAS domain VV208B2_17730 PF00916 Sulfate permease family VV208B2_17740 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV208B2_17750 PF12557 Cob(I)alamin adenosyltransferase N terminal VV208B2_17750 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VV208B2_17770 PF00485 Phosphoribulokinase / Uridine kinase family VV208B2_17780 PF10609 NUBPL iron-transfer P-loop NTPase VV208B2_17790 PF09334 tRNA synthetases class I (M) VV208B2_17790 PF01588 Putative tRNA binding domain VV208B2_17820 PF08534 Redoxin VV208B2_17830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV208B2_17830 PF01578 Cytochrome C assembly protein VV208B2_17840 PF03916 Polysulphide reductase, NrfD VV208B2_17850 PF13247 4Fe-4S dicluster domain VV208B2_17870 PF02335 Cytochrome c552 VV208B2_17900 PF03989 DNA gyrase C-terminal domain, beta-propeller VV208B2_17900 PF00521 DNA gyrase/topoisomerase IV, subunit A VV208B2_17920 PF03477 ATP cone domain VV208B2_17920 PF02867 Ribonucleotide reductase, barrel domain VV208B2_17920 PF00317 Ribonucleotide reductase, all-alpha domain VV208B2_17930 PF00268 Ribonucleotide reductase, small chain VV208B2_17950 PF02464 Competence-damaged protein VV208B2_17950 PF00994 Probable molybdopterin binding domain VV208B2_17990 PF16653 Saccharopine dehydrogenase C-terminal domain VV208B2_17990 PF03435 Saccharopine dehydrogenase NADP binding domain VV208B2_18000 PF00202 Aminotransferase class-III VV208B2_18010 PF01066 CDP-alcohol phosphatidyltransferase VV208B2_18020 PF08459 UvrC Helix-hairpin-helix N-terminal VV208B2_18020 PF02151 UvrB/uvrC motif VV208B2_18020 PF01541 GIY-YIG catalytic domain VV208B2_18030 PF00072 Response regulator receiver domain VV208B2_18030 PF00196 Bacterial regulatory proteins, luxR family VV208B2_18040 PF00136 DNA polymerase family B VV208B2_18040 PF03104 DNA polymerase family B, exonuclease domain VV208B2_18050 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_18050 PF00563 EAL domain VV208B2_18050 PF08448 PAS fold VV208B2_18050 PF08447 PAS fold VV208B2_18070 PF09285 Elongation factor P, C-terminal VV208B2_18070 PF08207 Elongation factor P (EF-P) KOW-like domain VV208B2_18070 PF01132 Elongation factor P (EF-P) OB domain VV208B2_18080 PF04269 Protein of unknown function, DUF440 VV208B2_18090 PF01479 S4 domain VV208B2_18090 PF00849 RNA pseudouridylate synthase VV208B2_18110 PF01300 Telomere recombination VV208B2_18120 PF02811 PHP domain VV208B2_18130 PF04715 Anthranilate synthase component I, N terminal region VV208B2_18130 PF00425 chorismate binding enzyme VV208B2_18140 PF00117 Glutamine amidotransferase class-I VV208B2_18150 PF00591 Glycosyl transferase family, a/b domain VV208B2_18150 PF02885 Glycosyl transferase family, helical bundle domain VV208B2_18160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VV208B2_18160 PF00218 Indole-3-glycerol phosphate synthase VV208B2_18170 PF00291 Pyridoxal-phosphate dependent enzyme VV208B2_18180 PF00290 Tryptophan synthase alpha chain VV208B2_18190 PF00375 Sodium:dicarboxylate symporter family VV208B2_18210 PF04279 Intracellular septation protein A VV208B2_18220 PF03061 Thioesterase superfamily VV208B2_18230 PF03795 YCII-related domain VV208B2_18250 PF13409 Glutathione S-transferase, N-terminal domain VV208B2_18260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_18260 PF00005 ABC transporter VV208B2_18270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_18270 PF00005 ABC transporter VV208B2_18280 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_18280 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_18290 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_18300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_18320 PF02391 MoaE protein VV208B2_18330 PF02597 ThiS family VV208B2_18340 PF01967 MoaC family VV208B2_18350 PF00994 Probable molybdopterin binding domain VV208B2_18360 PF04055 Radical SAM superfamily VV208B2_18360 PF06463 Molybdenum Cofactor Synthesis C VV208B2_18370 PF01933 Uncharacterised protein family UPF0052 VV208B2_18380 PF01627 Hpt domain VV208B2_18390 PF00158 Sigma-54 interaction domain VV208B2_18390 PF00072 Response regulator receiver domain VV208B2_18390 PF02954 Bacterial regulatory protein, Fis family VV208B2_18400 PF17757 UvrB interaction domain VV208B2_18400 PF12344 Ultra-violet resistance protein B VV208B2_18400 PF02151 UvrB/uvrC motif VV208B2_18400 PF04851 Type III restriction enzyme, res subunit VV208B2_18400 PF00271 Helicase conserved C-terminal domain VV208B2_18430 PF02508 Rnf-Nqr subunit, membrane protein VV208B2_18440 PF04060 Putative Fe-S cluster VV208B2_18450 PF10531 SLBB domain VV208B2_18450 PF13375 RnfC Barrel sandwich hybrid domain VV208B2_18450 PF12838 4Fe-4S dicluster domain VV208B2_18450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VV208B2_18460 PF03116 NQR2, RnfD, RnfE family VV208B2_18470 PF04205 FMN-binding domain VV208B2_18480 PF02508 Rnf-Nqr subunit, membrane protein VV208B2_18490 PF10576 Iron-sulfur binding domain of endonuclease III VV208B2_18490 PF00633 Helix-hairpin-helix motif VV208B2_18490 PF00730 HhH-GPD superfamily base excision DNA repair protein VV208B2_18500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_18510 PF10952 Protein of unknown function (DUF2753) VV208B2_18520 PF18393 MotY N-terminal domain VV208B2_18520 PF00691 OmpA family VV208B2_18540 PF00929 Exonuclease VV208B2_18550 PF13726 Na+-H+ antiporter family VV208B2_18550 PF03553 Na+/H+ antiporter family VV208B2_18570 PF00462 Glutaredoxin VV208B2_18580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV208B2_18580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV208B2_18610 PF00465 Iron-containing alcohol dehydrogenase VV208B2_18610 PF00171 Aldehyde dehydrogenase family VV208B2_18620 PF01914 MarC family integral membrane protein VV208B2_18630 PF00520 Ion transport protein VV208B2_18630 PF00027 Cyclic nucleotide-binding domain VV208B2_18650 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV208B2_18650 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV208B2_18660 PF03553 Na+/H+ antiporter family VV208B2_18690 PF04245 37-kD nucleoid-associated bacterial protein VV208B2_18700 PF07208 Protein of unknown function (DUF1414) VV208B2_18710 PF00884 Sulfatase VV208B2_18710 PF11893 Domain of unknown function (DUF3413) VV208B2_18720 PF02254 TrkA-N domain VV208B2_18720 PF02080 TrkA-C domain VV208B2_18730 PF02386 Cation transport protein VV208B2_18740 PF04074 YhcH/YjgK/YiaL VV208B2_18750 PF13091 PLD-like domain VV208B2_18760 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_18760 PF00072 Response regulator receiver domain VV208B2_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_18770 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_18770 PF09308 LuxQ, periplasmic VV208B2_18770 PF00072 Response regulator receiver domain VV208B2_18780 PF00850 Histone deacetylase domain VV208B2_18790 PF01751 Toprim domain VV208B2_18790 PF01131 DNA topoisomerase VV208B2_18800 PF00881 Nitroreductase family VV208B2_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_18810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VV208B2_18820 PF01343 Peptidase family S49 VV208B2_18830 PF17763 Glutaminase/Asparaginase C-terminal domain VV208B2_18830 PF00710 Asparaginase, N-terminal VV208B2_18840 PF07023 Protein of unknown function (DUF1315) VV208B2_18860 PF01641 SelR domain VV208B2_18870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV208B2_18870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV208B2_18880 PF01263 Aldose 1-epimerase VV208B2_18890 PF02743 Cache domain VV208B2_18890 PF00672 HAMP domain VV208B2_18890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_18920 PF07969 Amidohydrolase family VV208B2_18930 PF03707 Bacterial signalling protein N terminal repeat VV208B2_18930 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_18930 PF00563 EAL domain VV208B2_18950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VV208B2_18960 PF09619 Type III secretion system lipoprotein chaperone (YscW) VV208B2_18990 PF01037 Lrp/AsnC ligand binding domain VV208B2_18990 PF13404 AsnC-type helix-turn-helix domain VV208B2_19000 PF00291 Pyridoxal-phosphate dependent enzyme VV208B2_19030 PF00873 AcrB/AcrD/AcrF family VV208B2_19040 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_19040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_19070 PF07690 Major Facilitator Superfamily VV208B2_19080 PF03601 Conserved hypothetical protein 698 VV208B2_19090 PF13193 AMP-binding enzyme C-terminal domain VV208B2_19090 PF00501 AMP-binding enzyme VV208B2_19100 PF13378 Enolase C-terminal domain-like VV208B2_19110 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_19120 PF12697 Alpha/beta hydrolase family VV208B2_19130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV208B2_19130 PF16582 Middle domain of thiamine pyrophosphate VV208B2_19130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV208B2_19140 PF00425 chorismate binding enzyme VV208B2_19150 PF00155 Aminotransferase class I and II VV208B2_19170 PF01966 HD domain VV208B2_19170 PF13286 Phosphohydrolase-associated domain VV208B2_19210 PF13145 PPIC-type PPIASE domain VV208B2_19220 PF00216 Bacterial DNA-binding protein VV208B2_19230 PF02190 ATP-dependent protease La (LON) substrate-binding domain VV208B2_19230 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_19230 PF05362 Lon protease (S16) C-terminal proteolytic domain VV208B2_19240 PF10431 C-terminal, D2-small domain, of ClpB protein VV208B2_19240 PF06689 ClpX C4-type zinc finger VV208B2_19240 PF07724 AAA domain (Cdc48 subfamily) VV208B2_19250 PF00574 Clp protease VV208B2_19260 PF05697 Bacterial trigger factor protein (TF) VV208B2_19260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_19260 PF05698 Bacterial trigger factor protein (TF) C-terminus VV208B2_19270 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_19270 PF02743 Cache domain VV208B2_19280 PF00072 Response regulator receiver domain VV208B2_19280 PF02954 Bacterial regulatory protein, Fis family VV208B2_19280 PF00158 Sigma-54 interaction domain VV208B2_19300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV208B2_19310 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VV208B2_19320 PF03480 Bacterial extracellular solute-binding protein, family 7 VV208B2_19330 PF00005 ABC transporter VV208B2_19330 PF17912 MalK OB fold domain VV208B2_19330 PF03459 TOBE domain VV208B2_19340 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_19350 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_19360 PF01547 Bacterial extracellular solute-binding protein VV208B2_19370 PF00672 HAMP domain VV208B2_19370 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_19380 PF00072 Response regulator receiver domain VV208B2_19380 PF00486 Transcriptional regulatory protein, C terminal VV208B2_19390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VV208B2_19400 PF00672 HAMP domain VV208B2_19400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_19400 PF02743 Cache domain VV208B2_19420 PF13006 Insertion element 4 transposase N-terminal VV208B2_19420 PF01609 Transposase DDE domain VV208B2_19430 PF04820 Tryptophan halogenase VV208B2_19480 PF00550 Phosphopantetheine attachment site VV208B2_19490 PF00550 Phosphopantetheine attachment site VV208B2_19510 PF13193 AMP-binding enzyme C-terminal domain VV208B2_19510 PF00501 AMP-binding enzyme VV208B2_19530 PF00535 Glycosyl transferase family 2 VV208B2_19540 PF00221 Aromatic amino acid lyase VV208B2_19590 PF02801 Beta-ketoacyl synthase, C-terminal domain VV208B2_19590 PF00109 Beta-ketoacyl synthase, N-terminal domain VV208B2_19620 PF00109 Beta-ketoacyl synthase, N-terminal domain VV208B2_19620 PF02801 Beta-ketoacyl synthase, C-terminal domain VV208B2_19650 PF03551 Transcriptional regulator PadR-like family VV208B2_19650 PF10400 Virulence activator alpha C-term VV208B2_19680 PF12961 Domain of unknown function (DUF3850) VV208B2_19750 PF02899 Phage integrase, N-terminal SAM-like domain VV208B2_19750 PF00589 Phage integrase family VV208B2_20100 PF00166 Chaperonin 10 Kd subunit VV208B2_20110 PF00589 Phage integrase family VV208B2_20110 PF02899 Phage integrase, N-terminal SAM-like domain VV208B2_20130 PF18719 ArlS sensor domain VV208B2_20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_20130 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_20140 PF00072 Response regulator receiver domain VV208B2_20140 PF00486 Transcriptional regulatory protein, C terminal VV208B2_20160 PF01773 Na+ dependent nucleoside transporter N-terminus VV208B2_20160 PF07662 Na+ dependent nucleoside transporter C-terminus VV208B2_20160 PF07670 Nucleoside recognition VV208B2_20170 PF03466 LysR substrate binding domain VV208B2_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_20180 PF13406 Transglycosylase SLT domain VV208B2_20190 PF05166 YcgL domain VV208B2_20200 PF05209 Septum formation inhibitor MinC, N-terminal domain VV208B2_20200 PF03775 Septum formation inhibitor MinC, C-terminal domain VV208B2_20210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV208B2_20220 PF03776 Septum formation topological specificity factor MinE VV208B2_20230 PF01612 3'-5' exonuclease VV208B2_20230 PF00570 HRDC domain VV208B2_20240 PF00501 AMP-binding enzyme VV208B2_20240 PF13193 AMP-binding enzyme C-terminal domain VV208B2_20250 PF00561 alpha/beta hydrolase fold VV208B2_20280 PF00814 Glycoprotease family VV208B2_20290 PF04851 Type III restriction enzyme, res subunit VV208B2_20290 PF13307 Helicase C-terminal domain VV208B2_20310 PF01842 ACT domain VV208B2_20310 PF00551 Formyl transferase VV208B2_20320 PF06185 YecM protein VV208B2_20330 PF05746 DALR anticodon binding domain VV208B2_20330 PF00750 tRNA synthetases class I (R) VV208B2_20330 PF03485 Arginyl tRNA synthetase N terminal domain VV208B2_20360 PF07664 Ferrous iron transport protein B C terminus VV208B2_20360 PF02421 Ferrous iron transport protein B VV208B2_20360 PF07670 Nucleoside recognition VV208B2_20370 PF04023 FeoA domain VV208B2_20390 PF01297 Zinc-uptake complex component A periplasmic VV208B2_20400 PF00005 ABC transporter VV208B2_20410 PF00950 ABC 3 transport family VV208B2_20420 PF02629 CoA binding domain VV208B2_20420 PF00549 CoA-ligase VV208B2_20430 PF08442 ATP-grasp domain VV208B2_20430 PF00549 CoA-ligase VV208B2_20440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV208B2_20440 PF00364 Biotin-requiring enzyme VV208B2_20440 PF02817 e3 binding domain VV208B2_20450 PF16078 2-oxoglutarate dehydrogenase N-terminus VV208B2_20450 PF02779 Transketolase, pyrimidine binding domain VV208B2_20450 PF16870 2-oxoglutarate dehydrogenase C-terminal VV208B2_20450 PF00676 Dehydrogenase E1 component VV208B2_20460 PF13085 2Fe-2S iron-sulfur cluster binding domain VV208B2_20470 PF02910 Fumarate reductase flavoprotein C-term VV208B2_20470 PF00890 FAD binding domain VV208B2_20480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV208B2_20490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV208B2_20500 PF00285 Citrate synthase, C-terminal domain VV208B2_20510 PF01784 NIF3 (NGG1p interacting factor 3) VV208B2_20530 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_20530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV208B2_20540 PF00375 Sodium:dicarboxylate symporter family VV208B2_20550 PF01042 Endoribonuclease L-PSP VV208B2_20560 PF13309 HTH domain VV208B2_20560 PF08348 YheO-like PAS domain VV208B2_20570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV208B2_20570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV208B2_20570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV208B2_20570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV208B2_20580 PF17206 SeqA protein N-terminal domain VV208B2_20580 PF03925 SeqA protein C-terminal domain VV208B2_20590 PF12697 Alpha/beta hydrolase family VV208B2_20610 PF00258 Flavodoxin VV208B2_20630 PF01475 Ferric uptake regulator family VV208B2_20640 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV208B2_20640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VV208B2_20650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV208B2_20650 PF00367 phosphotransferase system, EIIB VV208B2_20650 PF02378 Phosphotransferase system, EIIC VV208B2_20660 PF01979 Amidohydrolase family VV208B2_20670 PF00480 ROK family VV208B2_20670 PF01047 MarR family VV208B2_20680 PF00999 Sodium/hydrogen exchanger family VV208B2_20680 PF02254 TrkA-N domain VV208B2_20690 PF00733 Asparagine synthase VV208B2_20690 PF13537 Glutamine amidotransferase domain VV208B2_20700 PF02357 Transcription termination factor nusG VV208B2_20710 PF00854 POT family VV208B2_20720 PF00672 HAMP domain VV208B2_20720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_20720 PF17200 Single Cache domain 2 VV208B2_20730 PF00762 Ferrochelatase VV208B2_20740 PF05191 Adenylate kinase, active site lid VV208B2_20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_20750 PF00183 Hsp90 protein VV208B2_20760 PF00486 Transcriptional regulatory protein, C terminal VV208B2_20770 PF17323 Trans-membrane regulatory protein ToxS VV208B2_20800 PF12850 Calcineurin-like phosphoesterase superfamily domain VV208B2_20830 PF07556 Protein of unknown function (DUF1538) VV208B2_20840 PF07556 Protein of unknown function (DUF1538) VV208B2_20850 PF08338 Domain of unknown function (DUF1731) VV208B2_20850 PF01370 NAD dependent epimerase/dehydratase family VV208B2_20860 PF00106 short chain dehydrogenase VV208B2_20870 PF00085 Thioredoxin VV208B2_20880 PF01145 SPFH domain / Band 7 family VV208B2_20880 PF16200 C-terminal region of band_7 VV208B2_20900 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV208B2_20910 PF13609 Gram-negative porin VV208B2_20920 PF12826 Helix-hairpin-helix motif VV208B2_20920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VV208B2_20920 PF03120 NAD-dependent DNA ligase OB-fold domain VV208B2_20920 PF00533 BRCA1 C Terminus (BRCT) domain VV208B2_20920 PF01653 NAD-dependent DNA ligase adenylation domain VV208B2_20930 PF04354 ZipA, C-terminal FtsZ-binding domain VV208B2_20950 PF00291 Pyridoxal-phosphate dependent enzyme VV208B2_20960 PF00381 PTS HPr component phosphorylation site VV208B2_20970 PF05524 PEP-utilising enzyme, N-terminal VV208B2_20970 PF00391 PEP-utilising enzyme, mobile domain VV208B2_20970 PF02896 PEP-utilising enzyme, TIM barrel domain VV208B2_20980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV208B2_20990 PF00669 Bacterial flagellin N-terminal helical region VV208B2_20990 PF07196 Flagellin hook IN motif VV208B2_20990 PF00700 Bacterial flagellin C-terminal helical region VV208B2_21000 PF00700 Bacterial flagellin C-terminal helical region VV208B2_21000 PF07196 Flagellin hook IN motif VV208B2_21000 PF00669 Bacterial flagellin N-terminal helical region VV208B2_21020 PF00669 Bacterial flagellin N-terminal helical region VV208B2_21020 PF07196 Flagellin hook IN motif VV208B2_21020 PF00700 Bacterial flagellin C-terminal helical region VV208B2_21040 PF00669 Bacterial flagellin N-terminal helical region VV208B2_21050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV208B2_21050 PF07196 Flagellin hook IN motif VV208B2_21060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV208B2_21060 PF10135 Rod binding protein VV208B2_21070 PF02119 Flagellar P-ring protein VV208B2_21080 PF02107 Flagellar L-ring protein VV208B2_21090 PF00460 Flagella basal body rod protein VV208B2_21090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV208B2_21100 PF00460 Flagella basal body rod protein VV208B2_21100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV208B2_21110 PF00460 Flagella basal body rod protein VV208B2_21110 PF07559 Flagellar basal body protein FlaE VV208B2_21110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV208B2_21120 PF13861 FlgD Tudor-like domain VV208B2_21120 PF03963 Flagellar hook capping protein - N-terminal region VV208B2_21120 PF13860 FlgD Ig-like domain VV208B2_21130 PF00460 Flagella basal body rod protein VV208B2_21130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV208B2_21140 PF00460 Flagella basal body rod protein VV208B2_21150 PF03705 CheR methyltransferase, all-alpha domain VV208B2_21150 PF01739 CheR methyltransferase, SAM binding domain VV208B2_21160 PF01584 CheW-like domain VV208B2_21160 PF00072 Response regulator receiver domain VV208B2_21240 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV208B2_21250 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV208B2_21260 PF13609 Gram-negative porin VV208B2_21270 PF00403 Heavy-metal-associated domain VV208B2_21290 PF02838 Glycosyl hydrolase family 20, domain 2 VV208B2_21290 PF00728 Glycosyl hydrolase family 20, catalytic domain VV208B2_21290 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VV208B2_21290 PF03173 Putative carbohydrate binding domain VV208B2_21300 PF01963 TraB family VV208B2_21320 PF01713 Smr domain VV208B2_21330 PF01479 S4 domain VV208B2_21330 PF00849 RNA pseudouridylate synthase VV208B2_21340 PF04073 Aminoacyl-tRNA editing domain VV208B2_21350 PF02872 5'-nucleotidase, C-terminal domain VV208B2_21350 PF00149 Calcineurin-like phosphoesterase VV208B2_21360 PF00793 DAHP synthetase I family VV208B2_21370 PF13369 Transglutaminase-like superfamily VV208B2_21380 PF04247 Invasion gene expression up-regulator, SirB VV208B2_21390 PF13847 Methyltransferase domain VV208B2_21390 PF17827 PrmC N-terminal domain VV208B2_21400 PF03462 PCRF domain VV208B2_21400 PF00472 RF-1 domain VV208B2_21410 PF01488 Shikimate / quinate 5-dehydrogenase VV208B2_21410 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VV208B2_21410 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VV208B2_21420 PF03550 Outer membrane lipoprotein LolB VV208B2_21430 PF00288 GHMP kinases N terminal domain VV208B2_21430 PF08544 GHMP kinases C terminal VV208B2_21440 PF14572 Phosphoribosyl synthetase-associated domain VV208B2_21440 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VV208B2_21450 PF01195 Peptidyl-tRNA hydrolase VV208B2_21460 PF06071 Protein of unknown function (DUF933) VV208B2_21460 PF01926 50S ribosome-binding GTPase VV208B2_21470 PF01494 FAD binding domain VV208B2_21480 PF04055 Radical SAM superfamily VV208B2_21480 PF01938 TRAM domain VV208B2_21480 PF00919 Uncharacterized protein family UPF0004 VV208B2_21490 PF02562 PhoH-like protein VV208B2_21500 PF02130 Uncharacterized protein family UPF0054 VV208B2_21510 PF00571 CBS domain VV208B2_21510 PF03471 Transporter associated domain VV208B2_21520 PF00795 Carbon-nitrogen hydrolase VV208B2_21530 PF07295 Zinc-ribbon containing domain VV208B2_21540 PF08264 Anticodon-binding domain of tRNA VV208B2_21540 PF13603 Leucyl-tRNA synthetase, Domain 2 VV208B2_21540 PF00133 tRNA synthetases class I (I, L, M and V) VV208B2_21550 PF04390 Lipopolysaccharide-assembly VV208B2_21560 PF06144 DNA polymerase III, delta subunit VV208B2_21560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VV208B2_21580 PF02590 Predicted SPOUT methyltransferase VV208B2_21590 PF03717 Penicillin-binding Protein dimerisation domain VV208B2_21590 PF00905 Penicillin binding protein transpeptidase domain VV208B2_21600 PF01098 Cell cycle protein VV208B2_21610 PF03330 Lytic transglycolase VV208B2_21610 PF05036 Sporulation related domain VV208B2_21620 PF07943 Penicillin-binding protein 5, C-terminal domain VV208B2_21620 PF00768 D-alanyl-D-alanine carboxypeptidase VV208B2_21630 PF04359 Protein of unknown function (DUF493) VV208B2_21640 PF03099 Biotin/lipoate A/B protein ligase family VV208B2_21650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VV208B2_21650 PF04055 Radical SAM superfamily VV208B2_21670 PF00464 Serine hydroxymethyltransferase VV208B2_21690 PF00128 Alpha amylase, catalytic domain VV208B2_21690 PF16657 Maltogenic Amylase, C-terminal domain VV208B2_21700 PF02378 Phosphotransferase system, EIIC VV208B2_21700 PF00367 phosphotransferase system, EIIB VV208B2_21710 PF00356 Bacterial regulatory proteins, lacI family VV208B2_21730 PF09383 NIL domain VV208B2_21730 PF00005 ABC transporter VV208B2_21740 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_21750 PF03180 NLPA lipoprotein VV208B2_21760 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VV208B2_21770 PF07348 Syd protein (SUKH-2) VV208B2_21780 PF14489 QueF-like protein VV208B2_21780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VV208B2_21800 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_21810 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VV208B2_21810 PF03641 Possible lysine decarboxylase VV208B2_21810 PF11892 Domain of unknown function (DUF3412) VV208B2_21820 PF01367 5'-3' exonuclease, C-terminal SAM fold VV208B2_21820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV208B2_21830 PF01223 DNA/RNA non-specific endonuclease VV208B2_21840 PF18125 RlmM ferredoxin-like domain VV208B2_21840 PF01728 FtsJ-like methyltransferase VV208B2_21850 PF04241 Protein of unknown function (DUF423) VV208B2_21870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_21870 PF03466 LysR substrate binding domain VV208B2_21890 PF02926 THUMP domain VV208B2_21890 PF02568 Thiamine biosynthesis protein (ThiI) VV208B2_21900 PF13677 Membrane MotB of proton-channel complex MotA/MotB VV208B2_21900 PF00691 OmpA family VV208B2_21910 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_21920 PF02609 Exonuclease VII small subunit VV208B2_21930 PF00348 Polyprenyl synthetase VV208B2_21940 PF02780 Transketolase, C-terminal domain VV208B2_21940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VV208B2_21940 PF02779 Transketolase, pyrimidine binding domain VV208B2_21950 PF04608 Phosphatidylglycerophosphatase A VV208B2_21960 PF02769 AIR synthase related protein, C-terminal domain VV208B2_21960 PF00586 AIR synthase related protein, N-terminal domain VV208B2_21970 PF01029 NusB family VV208B2_21980 PF00885 6,7-dimethyl-8-ribityllumazine synthase VV208B2_21990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VV208B2_21990 PF00925 GTP cyclohydrolase II VV208B2_22000 PF00677 Lumazine binding domain VV208B2_22010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV208B2_22010 PF01872 RibD C-terminal domain VV208B2_22020 PF03477 ATP cone domain VV208B2_22030 PF00171 Aldehyde dehydrogenase family VV208B2_22040 PF01472 PUA domain VV208B2_22040 PF00696 Amino acid kinase family VV208B2_22050 PF07417 Sigma factor-binding transcriptional regulator Crl VV208B2_22060 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VV208B2_22070 PF00156 Phosphoribosyl transferase domain VV208B2_22080 PF00860 Permease family VV208B2_22090 PF07687 Peptidase dimerisation domain VV208B2_22090 PF01546 Peptidase family M20/M25/M40 VV208B2_22140 PF02769 AIR synthase related protein, C-terminal domain VV208B2_22140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VV208B2_22140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VV208B2_22150 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_22150 PF01464 Transglycosylase SLT domain VV208B2_22160 PF14437 MafB19-like deaminase VV208B2_22170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_22170 PF03466 LysR substrate binding domain VV208B2_22180 PF08240 Alcohol dehydrogenase GroES-like domain VV208B2_22180 PF00107 Zinc-binding dehydrogenase VV208B2_22190 PF00756 Putative esterase VV208B2_22200 PF03806 AbgT putative transporter family VV208B2_22240 PF07963 Prokaryotic N-terminal methylation motif VV208B2_22240 PF00114 Pilin (bacterial filament) VV208B2_22250 PF07963 Prokaryotic N-terminal methylation motif VV208B2_22250 PF00114 Pilin (bacterial filament) VV208B2_22260 PF01556 DnaJ C terminal domain VV208B2_22260 PF00684 DnaJ central domain VV208B2_22260 PF00226 DnaJ domain VV208B2_22270 PF00012 Hsp70 protein VV208B2_22320 PF00375 Sodium:dicarboxylate symporter family VV208B2_22330 PF01025 GrpE VV208B2_22340 PF01513 ATP-NAD kinase VV208B2_22350 PF02463 RecF/RecN/SMC N terminal domain VV208B2_22360 PF04355 SmpA / OmlA family VV208B2_22370 PF03658 RnfH family Ubiquitin VV208B2_22380 PF03364 Polyketide cyclase / dehydrase and lipid transport VV208B2_22390 PF01668 SmpB protein VV208B2_22480 PF03481 Putative GTP-binding controlling metal-binding VV208B2_22480 PF01300 Telomere recombination VV208B2_22510 PF07885 Ion channel VV208B2_22520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_22520 PF03466 LysR substrate binding domain VV208B2_22530 PF01266 FAD dependent oxidoreductase VV208B2_22540 PF01235 Sodium:alanine symporter family VV208B2_22550 PF01184 GPR1/FUN34/yaaH family VV208B2_22560 PF00704 Glycosyl hydrolases family 18 VV208B2_22560 PF06483 Chitinase C VV208B2_22570 PF00809 Pterin binding enzyme VV208B2_22580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV208B2_22580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV208B2_22580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV208B2_22580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV208B2_22600 PF00186 Dihydrofolate reductase VV208B2_22620 PF00440 Bacterial regulatory proteins, tetR family VV208B2_22620 PF02909 Tetracyclin repressor-like, C-terminal domain VV208B2_22630 PF07690 Major Facilitator Superfamily VV208B2_22740 PF03432 Relaxase/Mobilisation nuclease domain VV208B2_22740 PF18821 Large polyvalent protein-associated domain 7 VV208B2_22810 PF13356 Arm DNA-binding domain VV208B2_22810 PF00589 Phage integrase family VV208B2_22820 PF00958 GMP synthase C terminal domain VV208B2_22820 PF02540 NAD synthase VV208B2_22820 PF00117 Glutamine amidotransferase class-I VV208B2_22830 PF00571 CBS domain VV208B2_22830 PF00478 IMP dehydrogenase / GMP reductase domain VV208B2_22840 PF02601 Exonuclease VII, large subunit VV208B2_22840 PF13742 OB-fold nucleic acid binding domain VV208B2_22860 PF13185 GAF domain VV208B2_22860 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_22880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VV208B2_22880 PF01926 50S ribosome-binding GTPase VV208B2_22890 PF13360 PQQ-like domain VV208B2_22900 PF09976 Tetratricopeptide repeat-like domain VV208B2_22910 PF13393 Histidyl-tRNA synthetase VV208B2_22910 PF03129 Anticodon binding domain VV208B2_22920 PF04551 GcpE protein VV208B2_22930 PF13464 Domain of unknown function (DUF4115) VV208B2_22940 PF04055 Radical SAM superfamily VV208B2_22950 PF00334 Nucleoside diphosphate kinase VV208B2_22960 PF00883 Cytosol aminopeptidase family, catalytic domain VV208B2_22960 PF12404 Peptidase VV208B2_22970 PF04384 Iron-sulphur cluster assembly VV208B2_22980 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_22990 PF00012 Hsp70 protein VV208B2_23000 PF00226 DnaJ domain VV208B2_23000 PF07743 HSCB C-terminal oligomerisation domain VV208B2_23010 PF01521 Iron-sulphur cluster biosynthesis VV208B2_23020 PF01592 NifU-like N terminal domain VV208B2_23030 PF00266 Aminotransferase class-V VV208B2_23040 PF02082 Transcriptional regulator VV208B2_23050 PF00588 SpoU rRNA Methylase family VV208B2_23060 PF00459 Inositol monophosphatase family VV208B2_23090 PF07549 SecD/SecF GG Motif VV208B2_23090 PF02355 Protein export membrane protein VV208B2_23100 PF07549 SecD/SecF GG Motif VV208B2_23100 PF02355 Protein export membrane protein VV208B2_23100 PF13721 SecD export protein N-terminal TM region VV208B2_23110 PF02699 Preprotein translocase subunit VV208B2_23120 PF01702 Queuine tRNA-ribosyltransferase VV208B2_23130 PF02547 Queuosine biosynthesis protein VV208B2_23160 PF00571 CBS domain VV208B2_23170 PF00356 Bacterial regulatory proteins, lacI family VV208B2_23180 PF00251 Glycosyl hydrolases family 32 N-terminal domain VV208B2_23180 PF08244 Glycosyl hydrolases family 32 C terminal VV208B2_23190 PF00367 phosphotransferase system, EIIB VV208B2_23190 PF02378 Phosphotransferase system, EIIC VV208B2_23200 PF00294 pfkB family carbohydrate kinase VV208B2_23210 PF00463 Isocitrate lyase family VV208B2_23220 PF01274 Malate synthase VV208B2_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_23230 PF03466 LysR substrate binding domain VV208B2_23240 PF00578 AhpC/TSA family VV208B2_23240 PF10417 C-terminal domain of 1-Cys peroxiredoxin VV208B2_23250 PF03932 CutC family VV208B2_23260 PF03976 Polyphosphate kinase 2 (PPK2) VV208B2_23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_23270 PF03466 LysR substrate binding domain VV208B2_23310 PF01895 PhoU domain VV208B2_23320 PF00005 ABC transporter VV208B2_23330 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_23340 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_23350 PF02503 Polyphosphate kinase middle domain VV208B2_23350 PF13090 Polyphosphate kinase C-terminal domain 2 VV208B2_23350 PF17941 Polyphosphate kinase C-terminal domain 1 VV208B2_23350 PF13089 Polyphosphate kinase N-terminal domain VV208B2_23360 PF02541 Ppx/GppA phosphatase family VV208B2_23370 PF12849 PBP superfamily domain VV208B2_23380 PF00989 PAS fold VV208B2_23380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_23380 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_23380 PF11808 Phosphate regulon sensor protein PhoR VV208B2_23390 PF00486 Transcriptional regulatory protein, C terminal VV208B2_23390 PF00072 Response regulator receiver domain VV208B2_23400 PF04381 Putative exonuclease, RdgC VV208B2_23410 PF01136 Peptidase family U32 VV208B2_23410 PF16325 Peptidase family U32 C-terminal domain VV208B2_23420 PF00037 4Fe-4S binding domain VV208B2_23430 PF03411 Penicillin-insensitive murein endopeptidase VV208B2_23440 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_23440 PF07724 AAA domain (Cdc48 subfamily) VV208B2_23440 PF17871 AAA lid domain VV208B2_23440 PF02861 Clp amino terminal domain, pathogenicity island component VV208B2_23440 PF10431 C-terminal, D2-small domain, of ClpB protein VV208B2_23450 PF02578 Multi-copper polyphenol oxidoreductase laccase VV208B2_23460 PF01479 S4 domain VV208B2_23460 PF00849 RNA pseudouridylate synthase VV208B2_23470 PF13525 Outer membrane lipoprotein VV208B2_23480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV208B2_23490 PF01817 Chorismate mutase type II VV208B2_23490 PF00800 Prephenate dehydratase VV208B2_23500 PF01931 Protein of unknown function DUF84 VV208B2_23510 PF01371 Trp repressor protein VV208B2_23520 PF01464 Transglycosylase SLT domain VV208B2_23520 PF14718 Soluble lytic murein transglycosylase L domain VV208B2_23530 PF12848 ABC transporter VV208B2_23530 PF00005 ABC transporter VV208B2_23540 PF07238 PilZ domain VV208B2_23550 PF04225 Opacity-associated protein A LysM-like domain VV208B2_23550 PF01551 Peptidase family M23 VV208B2_23560 PF02153 Prephenate dehydrogenase VV208B2_23560 PF01817 Chorismate mutase type II VV208B2_23570 PF00793 DAHP synthetase I family VV208B2_23580 PF00933 Glycosyl hydrolase family 3 N terminal domain VV208B2_23590 PF03702 Anhydro-N-acetylmuramic acid kinase VV208B2_23620 PF02554 Carbon starvation protein CstA VV208B2_23630 PF07694 5TMR of 5TMR-LYT VV208B2_23630 PF06580 Histidine kinase VV208B2_23640 PF04397 LytTr DNA-binding domain VV208B2_23640 PF00072 Response regulator receiver domain VV208B2_23650 PF02401 LytB protein VV208B2_23660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_23670 PF01252 Signal peptidase (SPase) II VV208B2_23680 PF08264 Anticodon-binding domain of tRNA VV208B2_23680 PF06827 Zinc finger found in FPG and IleRS VV208B2_23680 PF00133 tRNA synthetases class I (I, L, M and V) VV208B2_23690 PF01687 Riboflavin kinase VV208B2_23690 PF06574 FAD synthetase VV208B2_23700 PF03023 Lipid II flippase MurJ VV208B2_23710 PF01649 Ribosomal protein S20 VV208B2_23720 PF01022 Bacterial regulatory protein, arsR family VV208B2_23730 PF03466 LysR substrate binding domain VV208B2_23730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_23740 PF02690 Na+/Pi-cotransporter VV208B2_23760 PF00303 Thymidylate synthase VV208B2_23770 PF01790 Prolipoprotein diacylglyceryl transferase VV208B2_23780 PF01925 Sulfite exporter TauE/SafE VV208B2_23790 PF02896 PEP-utilising enzyme, TIM barrel domain VV208B2_23790 PF01590 GAF domain VV208B2_23790 PF05524 PEP-utilising enzyme, N-terminal VV208B2_23790 PF00391 PEP-utilising enzyme, mobile domain VV208B2_23800 PF00293 NUDIX domain VV208B2_23810 PF02976 DNA mismatch repair enzyme MutH VV208B2_23830 PF00248 Aldo/keto reductase family VV208B2_23850 PF06505 Activator of aromatic catabolism VV208B2_23850 PF02830 V4R domain VV208B2_23850 PF02954 Bacterial regulatory protein, Fis family VV208B2_23850 PF00158 Sigma-54 interaction domain VV208B2_23860 PF01336 OB-fold nucleic acid binding domain VV208B2_23860 PF00152 tRNA synthetases class II (D, K and N) VV208B2_23870 PF03462 PCRF domain VV208B2_23870 PF00472 RF-1 domain VV208B2_23880 PF01368 DHH family VV208B2_23880 PF02272 DHHA1 domain VV208B2_23880 PF17768 RecJ OB domain VV208B2_23890 PF10411 Disulfide bond isomerase protein N-terminus VV208B2_23890 PF13098 Thioredoxin-like domain VV208B2_23900 PF02899 Phage integrase, N-terminal SAM-like domain VV208B2_23900 PF00589 Phage integrase family VV208B2_23910 PF00258 Flavodoxin VV208B2_23920 PF05525 Branched-chain amino acid transport protein VV208B2_23930 PF05175 Methyltransferase small domain VV208B2_23940 PF00271 Helicase conserved C-terminal domain VV208B2_23940 PF00270 DEAD/DEAH box helicase VV208B2_23950 PF03883 Peroxide stress protein YaaA VV208B2_23960 PF01235 Sodium:alanine symporter family VV208B2_23990 PF03167 Uracil DNA glycosylase superfamily VV208B2_24000 PF01261 Xylose isomerase-like TIM barrel VV208B2_24010 PF01228 Glycine radical VV208B2_24020 PF00291 Pyridoxal-phosphate dependent enzyme VV208B2_24020 PF14821 Threonine synthase N terminus VV208B2_24030 PF08544 GHMP kinases C terminal VV208B2_24030 PF00288 GHMP kinases N terminal domain VV208B2_24040 PF13840 ACT domain VV208B2_24040 PF01842 ACT domain VV208B2_24040 PF00742 Homoserine dehydrogenase VV208B2_24040 PF00696 Amino acid kinase family VV208B2_24040 PF03447 Homoserine dehydrogenase, NAD binding domain VV208B2_24060 PF03737 Aldolase/RraA VV208B2_24080 PF00486 Transcriptional regulatory protein, C terminal VV208B2_24080 PF00072 Response regulator receiver domain VV208B2_24100 PF01627 Hpt domain VV208B2_24100 PF18415 Histidine kinase receptor ArcB trans-membrane domain VV208B2_24100 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_24100 PF00989 PAS fold VV208B2_24100 PF00072 Response regulator receiver domain VV208B2_24100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_24110 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_24110 PF00360 Phytochrome region VV208B2_24110 PF01590 GAF domain VV208B2_24110 PF00563 EAL domain VV208B2_24120 PF16199 Radical_SAM C-terminal domain VV208B2_24120 PF04055 Radical SAM superfamily VV208B2_24130 PF04898 Glutamate synthase central domain VV208B2_24130 PF01645 Conserved region in glutamate synthase VV208B2_24130 PF00310 Glutamine amidotransferases class-II VV208B2_24130 PF01493 GXGXG motif VV208B2_24140 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_24140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV208B2_24150 PF04898 Glutamate synthase central domain VV208B2_24150 PF00310 Glutamine amidotransferases class-II VV208B2_24150 PF01493 GXGXG motif VV208B2_24150 PF01645 Conserved region in glutamate synthase VV208B2_24160 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_24160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV208B2_24180 PF01048 Phosphorylase superfamily VV208B2_24190 PF17113 Regulatory signalling modulator protein AmpE VV208B2_24190 PF03186 CobD/Cbib protein VV208B2_24200 PF01497 Periplasmic binding protein VV208B2_24210 PF03458 UPF0126 domain VV208B2_24220 PF03466 LysR substrate binding domain VV208B2_24220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_24230 PF01925 Sulfite exporter TauE/SafE VV208B2_24250 PF02142 MGS-like domain VV208B2_24250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV208B2_24250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV208B2_24260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VV208B2_24260 PF00117 Glutamine amidotransferase class-I VV208B2_24270 PF01113 Dihydrodipicolinate reductase, N-terminus VV208B2_24270 PF05173 Dihydrodipicolinate reductase, C-terminus VV208B2_24280 PF00293 NUDIX domain VV208B2_24290 PF02810 SEC-C motif VV208B2_24290 PF07517 SecA DEAD-like domain VV208B2_24290 PF01043 SecA preprotein cross-linking domain VV208B2_24290 PF07516 SecA Wing and Scaffold domain VV208B2_24310 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VV208B2_24320 PF12327 FtsZ family, C-terminal domain VV208B2_24320 PF00091 Tubulin/FtsZ family, GTPase domain VV208B2_24330 PF02491 SHS2 domain inserted in FTSA VV208B2_24340 PF03799 Cell division protein FtsQ VV208B2_24340 PF08478 POTRA domain, FtsQ-type VV208B2_24350 PF02875 Mur ligase family, glutamate ligase domain VV208B2_24350 PF01225 Mur ligase family, catalytic domain VV208B2_24350 PF08245 Mur ligase middle domain VV208B2_24360 PF03033 Glycosyltransferase family 28 N-terminal domain VV208B2_24360 PF04101 Glycosyltransferase family 28 C-terminal domain VV208B2_24370 PF01098 Cell cycle protein VV208B2_24380 PF02875 Mur ligase family, glutamate ligase domain VV208B2_24380 PF08245 Mur ligase middle domain VV208B2_24390 PF00953 Glycosyl transferase family 4 VV208B2_24390 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VV208B2_24400 PF01225 Mur ligase family, catalytic domain VV208B2_24400 PF02875 Mur ligase family, glutamate ligase domain VV208B2_24400 PF08245 Mur ligase middle domain VV208B2_24410 PF01225 Mur ligase family, catalytic domain VV208B2_24410 PF02875 Mur ligase family, glutamate ligase domain VV208B2_24410 PF08245 Mur ligase middle domain VV208B2_24420 PF03717 Penicillin-binding Protein dimerisation domain VV208B2_24420 PF00905 Penicillin binding protein transpeptidase domain VV208B2_24430 PF04999 Cell division protein FtsL VV208B2_24440 PF01795 MraW methylase family VV208B2_24450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV208B2_24460 PF04348 LppC putative lipoprotein VV208B2_24470 PF02021 Uncharacterised protein family UPF0102 VV208B2_24480 PF13580 SIS domain VV208B2_24490 PF04972 BON domain VV208B2_24500 PF04386 Stringent starvation protein B VV208B2_24510 PF00043 Glutathione S-transferase, C-terminal domain VV208B2_24510 PF02798 Glutathione S-transferase, N-terminal domain VV208B2_24520 PF02167 Cytochrome C1 family VV208B2_24530 PF00032 Cytochrome b(C-terminal)/b6/petD VV208B2_24530 PF00033 Cytochrome b/b6/petB VV208B2_24540 PF00355 Rieske [2Fe-2S] domain VV208B2_24540 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VV208B2_24550 PF00380 Ribosomal protein S9/S16 VV208B2_24560 PF00572 Ribosomal protein L13 VV208B2_24570 PF03969 AFG1-like ATPase VV208B2_24580 PF06295 Protein of unknown function (DUF1043) VV208B2_24590 PF00595 PDZ domain VV208B2_24600 PF13180 PDZ domain VV208B2_24610 PF00521 DNA gyrase/topoisomerase IV, subunit A VV208B2_24610 PF03989 DNA gyrase C-terminal domain, beta-propeller VV208B2_24620 PF00204 DNA gyrase B VV208B2_24620 PF00986 DNA gyrase B subunit, carboxyl terminus VV208B2_24620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_24620 PF01751 Toprim domain VV208B2_24630 PF05728 Uncharacterised protein family (UPF0227) VV208B2_24640 PF00149 Calcineurin-like phosphoesterase VV208B2_24650 PF06853 Protein of unknown function (DUF1249) VV208B2_24660 PF00293 NUDIX domain VV208B2_24670 PF02321 Outer membrane efflux protein VV208B2_24680 PF01467 Cytidylyltransferase-like VV208B2_24680 PF00294 pfkB family carbohydrate kinase VV208B2_24690 PF03710 Glutamate-ammonia ligase adenylyltransferase VV208B2_24690 PF08335 GlnD PII-uridylyltransferase VV208B2_24700 PF12729 Four helix bundle sensory module for signal transduction VV208B2_24700 PF00672 HAMP domain VV208B2_24700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_24710 PF07885 Ion channel VV208B2_24720 PF01928 CYTH domain VV208B2_24730 PF01865 Protein of unknown function DUF47 VV208B2_24740 PF01384 Phosphate transporter family VV208B2_24750 PF08239 Bacterial SH3 domain VV208B2_24760 PF13401 AAA domain VV208B2_24760 PF01471 Putative peptidoglycan binding domain VV208B2_24770 PF01966 HD domain VV208B2_24770 PF01743 Poly A polymerase head domain VV208B2_24770 PF12627 Probable RNA and SrmB- binding site of polymerase A VV208B2_24780 PF02673 Bacitracin resistance protein BacA VV208B2_24790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV208B2_24800 PF02152 Dihydroneopterin aldolase VV208B2_24810 PF02660 Glycerol-3-phosphate acyltransferase VV208B2_24820 PF12697 Alpha/beta hydrolase family VV208B2_24830 PF00814 Glycoprotease family VV208B2_24840 PF01165 Ribosomal protein S21 VV208B2_24850 PF09424 Yqey-like protein VV208B2_24860 PF08278 DNA primase DnaG DnaB-binding VV208B2_24860 PF10410 DnaB-helicase binding domain of primase VV208B2_24860 PF01807 CHC2 zinc finger VV208B2_24860 PF08275 DNA primase catalytic core, N-terminal domain VV208B2_24870 PF04546 Sigma-70, non-essential region VV208B2_24870 PF00140 Sigma-70 factor, region 1.2 VV208B2_24870 PF04542 Sigma-70 region 2 VV208B2_24870 PF03979 Sigma-70 factor, region 1.1 VV208B2_24870 PF04545 Sigma-70, region 4 VV208B2_24870 PF04539 Sigma-70 region 3 VV208B2_24930 PF00589 Phage integrase family VV208B2_24930 PF14659 Phage integrase, N-terminal SAM-like domain VV208B2_24930 PF13356 Arm DNA-binding domain VV208B2_24940 PF00589 Phage integrase family VV208B2_24940 PF13356 Arm DNA-binding domain VV208B2_24980 PF13581 Histidine kinase-like ATPase domain VV208B2_25020 PF04002 RadC-like JAB domain VV208B2_25080 PF00873 AcrB/AcrD/AcrF family VV208B2_25090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_25110 PF02470 MlaD protein VV208B2_25120 PF04403 Paraquat-inducible protein A VV208B2_25130 PF05552 Conserved TM helix VV208B2_25130 PF00924 Mechanosensitive ion channel VV208B2_25140 PF00075 RNase H VV208B2_25220 PF03480 Bacterial extracellular solute-binding protein, family 7 VV208B2_25230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_25230 PF02378 Phosphotransferase system, EIIC VV208B2_25230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV208B2_25240 PF01232 Mannitol dehydrogenase Rossmann domain VV208B2_25240 PF08125 Mannitol dehydrogenase C-terminal domain VV208B2_25250 PF05068 Mannitol repressor VV208B2_25260 PF00665 Integrase core domain VV208B2_25280 PF01527 Transposase VV208B2_25330 PF00691 OmpA family VV208B2_25330 PF01389 OmpA-like transmembrane domain VV208B2_25340 PF01527 Transposase VV208B2_25360 PF18623 TnsE C-terminal domain VV208B2_25370 PF13401 AAA domain VV208B2_25370 PF11426 Tn7 transposition regulator TnsC VV208B2_25380 PF00665 Integrase core domain VV208B2_25390 PF08721 TnsA endonuclease C terminal VV208B2_25390 PF08722 TnsA endonuclease N terminal VV208B2_25400 PF01380 SIS domain VV208B2_25410 PF08220 DeoR-like helix-turn-helix domain VV208B2_25410 PF00455 DeoR C terminal sensor domain VV208B2_25420 PF00224 Pyruvate kinase, barrel domain VV208B2_25420 PF02887 Pyruvate kinase, alpha/beta domain VV208B2_25440 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_25440 PF07694 5TMR of 5TMR-LYT VV208B2_25450 PF10369 Small subunit of acetolactate synthase VV208B2_25460 PF00205 Thiamine pyrophosphate enzyme, central domain VV208B2_25460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV208B2_25460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV208B2_25470 PF00501 AMP-binding enzyme VV208B2_25480 PF03466 LysR substrate binding domain VV208B2_25480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_25500 PF01569 PAP2 superfamily VV208B2_25520 PF00682 HMGL-like VV208B2_25520 PF08502 LeuA allosteric (dimerisation) domain VV208B2_25530 PF00180 Isocitrate/isopropylmalate dehydrogenase VV208B2_25540 PF00330 Aconitase family (aconitate hydratase) VV208B2_25550 PF00694 Aconitase C-terminal domain VV208B2_25570 PF00226 DnaJ domain VV208B2_25570 PF05099 Tellurite resistance protein TerB VV208B2_25580 PF03968 OstA-like protein VV208B2_25580 PF04453 LPS transport system D VV208B2_25590 PF00639 PPIC-type PPIASE domain VV208B2_25590 PF09312 SurA N-terminal domain VV208B2_25600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VV208B2_25610 PF00398 Ribosomal RNA adenine dimethylase VV208B2_25620 PF04379 ApaG domain VV208B2_25630 PF00149 Calcineurin-like phosphoesterase VV208B2_25640 PF00186 Dihydrofolate reductase VV208B2_25650 PF12821 Threonine/Serine exporter, ThrE VV208B2_25660 PF06738 Putative threonine/serine exporter VV208B2_25670 PF01926 50S ribosome-binding GTPase VV208B2_25670 PF01018 GTP1/OBG VV208B2_25680 PF01016 Ribosomal L27 protein VV208B2_25690 PF00829 Ribosomal prokaryotic L21 protein VV208B2_25700 PF00348 Polyprenyl synthetase VV208B2_25710 PF00056 lactate/malate dehydrogenase, NAD binding domain VV208B2_25710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VV208B2_25720 PF02863 Arginine repressor, C-terminal domain VV208B2_25720 PF01316 Arginine repressor, DNA binding domain VV208B2_25730 PF16868 NMT1-like family VV208B2_25750 PF00582 Universal stress protein family VV208B2_25760 PF01553 Acyltransferase VV208B2_25770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV208B2_25780 PF01722 BolA-like protein VV208B2_25800 PF05494 MlaC protein VV208B2_25810 PF02470 MlaD protein VV208B2_25820 PF02405 Permease MlaE VV208B2_25830 PF00005 ABC transporter VV208B2_25840 PF01699 Sodium/calcium exchanger protein VV208B2_25850 PF01380 SIS domain VV208B2_25850 PF00571 CBS domain VV208B2_25880 PF03968 OstA-like protein VV208B2_25890 PF00005 ABC transporter VV208B2_25890 PF12399 Branched-chain amino acid ATP-binding cassette transporter VV208B2_25900 PF00309 Sigma-54 factor, Activator interacting domain (AID) VV208B2_25900 PF04552 Sigma-54, DNA binding domain VV208B2_25900 PF04963 Sigma-54 factor, core binding domain VV208B2_25910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV208B2_25920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_25930 PF03668 P-loop ATPase protein family VV208B2_25940 PF00381 PTS HPr component phosphorylation site VV208B2_25950 PF00571 CBS domain VV208B2_25950 PF03448 MgtE intracellular N domain VV208B2_25950 PF01769 Divalent cation transporter VV208B2_25960 PF01523 Putative modulator of DNA gyrase VV208B2_25970 PF04751 Protein of unknown function (DUF615) VV208B2_25980 PF00005 ABC transporter VV208B2_25990 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_26010 PF02441 Flavoprotein VV208B2_26020 PF01225 Mur ligase family, catalytic domain VV208B2_26020 PF02875 Mur ligase family, glutamate ligase domain VV208B2_26020 PF08245 Mur ligase middle domain VV208B2_26030 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VV208B2_26040 PF00719 Inorganic pyrophosphatase VV208B2_26060 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VV208B2_26070 PF04357 TamB, inner membrane protein subunit of TAM complex VV208B2_26080 PF17243 POTRA domain TamA domain 1 VV208B2_26080 PF01103 Surface antigen VV208B2_26080 PF07244 Surface antigen variable number repeat VV208B2_26090 PF01625 Peptide methionine sulfoxide reductase VV208B2_26110 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VV208B2_26140 PF00005 ABC transporter VV208B2_26140 PF02687 FtsX-like permease family VV208B2_26140 PF12704 MacB-like periplasmic core domain VV208B2_26190 PF03600 Citrate transporter VV208B2_26190 PF02080 TrkA-C domain VV208B2_26200 PF00009 Elongation factor Tu GTP binding domain VV208B2_26210 PF01507 Phosphoadenosine phosphosulfate reductase family VV208B2_26220 PF14824 Sirohaem biosynthesis protein central VV208B2_26220 PF10414 Sirohaem synthase dimerisation region VV208B2_26220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV208B2_26230 PF00149 Calcineurin-like phosphoesterase VV208B2_26230 PF02872 5'-nucleotidase, C-terminal domain VV208B2_26250 PF13673 Acetyltransferase (GNAT) domain VV208B2_26270 PF08525 Opacity-associated protein A N-terminal motif VV208B2_26270 PF04225 Opacity-associated protein A LysM-like domain VV208B2_26280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV208B2_26280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_26300 PF01196 Ribosomal protein L17 VV208B2_26310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VV208B2_26310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VV208B2_26310 PF01000 RNA polymerase Rpb3/RpoA insert domain VV208B2_26320 PF01479 S4 domain VV208B2_26320 PF00163 Ribosomal protein S4/S9 N-terminal domain VV208B2_26330 PF00411 Ribosomal protein S11 VV208B2_26340 PF00416 Ribosomal protein S13/S18 VV208B2_26350 PF00344 SecY translocase VV208B2_26360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VV208B2_26370 PF00327 Ribosomal protein L30p/L7e VV208B2_26380 PF00333 Ribosomal protein S5, N-terminal domain VV208B2_26380 PF03719 Ribosomal protein S5, C-terminal domain VV208B2_26390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VV208B2_26400 PF00347 Ribosomal protein L6 VV208B2_26410 PF00410 Ribosomal protein S8 VV208B2_26420 PF00253 Ribosomal protein S14p/S29e VV208B2_26430 PF00673 ribosomal L5P family C-terminus VV208B2_26430 PF00281 Ribosomal protein L5 VV208B2_26440 PF00467 KOW motif VV208B2_26440 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VV208B2_26450 PF00238 Ribosomal protein L14p/L23e VV208B2_26460 PF00366 Ribosomal protein S17 VV208B2_26470 PF00831 Ribosomal L29 protein VV208B2_26480 PF00252 Ribosomal protein L16p/L10e VV208B2_26490 PF07650 KH domain VV208B2_26490 PF00189 Ribosomal protein S3, C-terminal domain VV208B2_26500 PF00237 Ribosomal protein L22p/L17e VV208B2_26510 PF00203 Ribosomal protein S19 VV208B2_26520 PF03947 Ribosomal Proteins L2, C-terminal domain VV208B2_26520 PF00181 Ribosomal Proteins L2, RNA binding domain VV208B2_26530 PF00276 Ribosomal protein L23 VV208B2_26540 PF00573 Ribosomal protein L4/L1 family VV208B2_26550 PF00297 Ribosomal protein L3 VV208B2_26560 PF00338 Ribosomal protein S10p/S20e VV208B2_26570 PF10996 Beta-Casp domain VV208B2_26570 PF00753 Metallo-beta-lactamase superfamily VV208B2_26570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VV208B2_26600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV208B2_26600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV208B2_26610 PF02719 Polysaccharide biosynthesis protein VV208B2_26620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV208B2_26630 PF01575 MaoC like domain VV208B2_26640 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_26640 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_26640 PF17836 PglD N-terminal domain VV208B2_26650 PF02397 Bacterial sugar transferase VV208B2_26660 PF00534 Glycosyl transferases group 1 VV208B2_26660 PF13477 Glycosyl transferase 4-like VV208B2_26700 PF13808 DDE_Tnp_1-associated VV208B2_26700 PF01609 Transposase DDE domain VV208B2_26720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV208B2_26720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VV208B2_26720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV208B2_26730 PF02350 UDP-N-acetylglucosamine 2-epimerase VV208B2_26740 PF02706 Chain length determinant protein VV208B2_26740 PF13807 G-rich domain on putative tyrosine kinase VV208B2_26740 PF13614 AAA domain VV208B2_26750 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV208B2_26780 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV208B2_26780 PF10531 SLBB domain VV208B2_26780 PF02563 Polysaccharide biosynthesis/export protein VV208B2_26820 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VV208B2_26840 PF06082 Exopolysaccharide biosynthesis protein YbjH VV208B2_26850 PF01370 NAD dependent epimerase/dehydratase family VV208B2_26860 PF03279 Bacterial lipid A biosynthesis acyltransferase VV208B2_26870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV208B2_26880 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VV208B2_26920 PF02348 Cytidylyltransferase VV208B2_26930 PF00483 Nucleotidyl transferase VV208B2_26960 PF02350 UDP-N-acetylglucosamine 2-epimerase VV208B2_26970 PF03102 NeuB family VV208B2_26970 PF08666 SAF domain VV208B2_26990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV208B2_27000 PF02719 Polysaccharide biosynthesis protein VV208B2_27020 PF11893 Domain of unknown function (DUF3413) VV208B2_27020 PF00884 Sulfatase VV208B2_27040 PF01219 Prokaryotic diacylglycerol kinase VV208B2_27050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV208B2_27060 PF00535 Glycosyl transferase family 2 VV208B2_27070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV208B2_27080 PF01467 Cytidylyltransferase-like VV208B2_27100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VV208B2_27100 PF06827 Zinc finger found in FPG and IleRS VV208B2_27100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VV208B2_27120 PF00471 Ribosomal protein L33 VV208B2_27130 PF00830 Ribosomal L28 family VV208B2_27140 PF04002 RadC-like JAB domain VV208B2_27150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_27150 PF02743 Cache domain VV208B2_27150 PF00672 HAMP domain VV208B2_27160 PF02441 Flavoprotein VV208B2_27160 PF04127 DNA / pantothenate metabolism flavoprotein VV208B2_27170 PF00440 Bacterial regulatory proteins, tetR family VV208B2_27180 PF03279 Bacterial lipid A biosynthesis acyltransferase VV208B2_27190 PF00156 Phosphoribosyl transferase domain VV208B2_27200 PF01138 3' exoribonuclease family, domain 1 VV208B2_27200 PF03725 3' exoribonuclease family, domain 2 VV208B2_27210 PF08340 Domain of unknown function (DUF1732) VV208B2_27210 PF03755 YicC-like family, N-terminal region VV208B2_27220 PF00892 EamA-like transporter family VV208B2_27250 PF00005 ABC transporter VV208B2_27250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_27260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_27260 PF00005 ABC transporter VV208B2_27270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_27280 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_27280 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_27290 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_27300 PF00593 TonB dependent receptor VV208B2_27300 PF07715 TonB-dependent Receptor Plug Domain VV208B2_27320 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_27330 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_27340 PF02472 Biopolymer transport protein ExbD/TolR VV208B2_27370 PF00625 Guanylate kinase VV208B2_27380 PF01192 RNA polymerase Rpb6 VV208B2_27390 PF04607 Region found in RelA / SpoT proteins VV208B2_27390 PF13291 ACT domain VV208B2_27390 PF02824 TGS domain VV208B2_27400 PF00588 SpoU rRNA Methylase family VV208B2_27400 PF12105 SpoU, rRNA methylase, C-terminal VV208B2_27410 PF17191 RecG wedge domain VV208B2_27410 PF00271 Helicase conserved C-terminal domain VV208B2_27410 PF00270 DEAD/DEAH box helicase VV208B2_27420 PF00860 Permease family VV208B2_27430 PF00672 HAMP domain VV208B2_27430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_27430 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_27440 PF00072 Response regulator receiver domain VV208B2_27440 PF00486 Transcriptional regulatory protein, C terminal VV208B2_27450 PF01272 Transcription elongation factor, GreA/GreB, C-term VV208B2_27450 PF03449 Transcription elongation factor, N-terminal VV208B2_27460 PF16921 Tex protein YqgF-like domain VV208B2_27460 PF09371 Tex-like protein N-terminal domain VV208B2_27460 PF17674 HHH domain VV208B2_27460 PF00575 S1 RNA binding domain VV208B2_27480 PF00561 alpha/beta hydrolase fold VV208B2_27490 PF00156 Phosphoribosyl transferase domain VV208B2_27500 PF01106 NifU-like domain VV208B2_27500 PF01521 Iron-sulphur cluster biosynthesis VV208B2_27510 PF00293 NUDIX domain VV208B2_27520 PF00459 Inositol monophosphatase family VV208B2_27530 PF01203 Type II secretion system (T2SS), protein N VV208B2_27540 PF04612 Type II secretion system (T2SS), protein M VV208B2_27550 PF12693 GspL periplasmic domain VV208B2_27550 PF05134 Type II secretion system (T2SS), protein L VV208B2_27560 PF03934 Type II secretion system (T2SS), protein K VV208B2_27570 PF07963 Prokaryotic N-terminal methylation motif VV208B2_27570 PF11612 Type II secretion system (T2SS), protein J VV208B2_27580 PF07963 Prokaryotic N-terminal methylation motif VV208B2_27580 PF02501 Type II secretion system (T2SS), protein I VV208B2_27590 PF12019 Type II transport protein GspH VV208B2_27600 PF08334 Type II secretion system (T2SS), protein G VV208B2_27600 PF07963 Prokaryotic N-terminal methylation motif VV208B2_27610 PF00482 Type II secretion system (T2SS), protein F VV208B2_27620 PF00437 Type II/IV secretion system protein VV208B2_27630 PF03958 Bacterial type II/III secretion system short domain VV208B2_27630 PF00263 Bacterial type II and III secretion system protein VV208B2_27640 PF11356 Type II secretion system protein C VV208B2_27650 PF01479 S4 domain VV208B2_27660 PF01430 Hsp33 protein VV208B2_27670 PF01293 Phosphoenolpyruvate carboxykinase VV208B2_27690 PF09500 Putative thioesterase (yiiD_Cterm) VV208B2_27690 PF00583 Acetyltransferase (GNAT) family VV208B2_27700 PF02580 D-Tyr-tRNA(Tyr) deacylase VV208B2_27710 PF03631 Virulence factor BrkB VV208B2_27740 PF00679 Elongation factor G C-terminus VV208B2_27740 PF00009 Elongation factor Tu GTP binding domain VV208B2_27740 PF03144 Elongation factor Tu domain 2 VV208B2_27750 PF00120 Glutamine synthetase, catalytic domain VV208B2_27750 PF03951 Glutamine synthetase, beta-Grasp domain VV208B2_27770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_27770 PF00989 PAS fold VV208B2_27770 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_27780 PF02954 Bacterial regulatory protein, Fis family VV208B2_27780 PF00072 Response regulator receiver domain VV208B2_27780 PF00158 Sigma-54 interaction domain VV208B2_27790 PF00563 EAL domain VV208B2_27790 PF13188 PAS domain VV208B2_27790 PF03707 Bacterial signalling protein N terminal repeat VV208B2_27790 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_27800 PF04055 Radical SAM superfamily VV208B2_27800 PF06969 HemN C-terminal domain VV208B2_27810 PF10675 Protein of unknown function (DUF2489) VV208B2_27820 PF04220 Der GTPase activator (YihI) VV208B2_27840 PF00034 Cytochrome c VV208B2_27850 PF01926 50S ribosome-binding GTPase VV208B2_27860 PF01612 3'-5' exonuclease VV208B2_27860 PF01367 5'-3' exonuclease, C-terminal SAM fold VV208B2_27860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV208B2_27860 PF00476 DNA polymerase family A VV208B2_27870 PF00490 Delta-aminolevulinic acid dehydratase VV208B2_27880 PF01026 TatD related DNase VV208B2_27890 PF00902 Sec-independent protein translocase protein (TatC) VV208B2_27900 PF02416 mttA/Hcf106 family VV208B2_27910 PF02416 mttA/Hcf106 family VV208B2_27920 PF03109 ABC1 family VV208B2_27930 PF02036 SCP-2 sterol transfer family VV208B2_27940 PF01209 ubiE/COQ5 methyltransferase family VV208B2_27950 PF02646 RmuC family VV208B2_27980 PF13358 DDE superfamily endonuclease VV208B2_28010 PF00175 Oxidoreductase NAD-binding domain VV208B2_28020 PF00175 Oxidoreductase NAD-binding domain VV208B2_28020 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_28020 PF00970 Oxidoreductase FAD-binding domain VV208B2_28030 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VV208B2_28050 PF07497 Rho termination factor, RNA-binding domain VV208B2_28050 PF07498 Rho termination factor, N-terminal domain VV208B2_28050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV208B2_28060 PF00085 Thioredoxin VV208B2_28070 PF00270 DEAD/DEAH box helicase VV208B2_28070 PF00271 Helicase conserved C-terminal domain VV208B2_28080 PF02541 Ppx/GppA phosphatase family VV208B2_28090 PF02592 Putative vitamin uptake transporter VV208B2_28110 PF09382 RQC domain VV208B2_28110 PF00270 DEAD/DEAH box helicase VV208B2_28110 PF16124 RecQ zinc-binding VV208B2_28110 PF00271 Helicase conserved C-terminal domain VV208B2_28110 PF00570 HRDC domain VV208B2_28120 PF00892 EamA-like transporter family VV208B2_28140 PF01810 LysE type translocator VV208B2_28150 PF13361 UvrD-like helicase C-terminal domain VV208B2_28150 PF00580 UvrD/REP helicase N-terminal domain VV208B2_28170 PF05114 Protein of unknown function (DUF692) VV208B2_28210 PF07690 Major Facilitator Superfamily VV208B2_28220 PF03466 LysR substrate binding domain VV208B2_28220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_28230 PF01321 Creatinase/Prolidase N-terminal domain VV208B2_28230 PF01321 Creatinase/Prolidase N-terminal domain VV208B2_28230 PF00557 Metallopeptidase family M24 VV208B2_28230 PF00557 Metallopeptidase family M24 VV208B2_28240 PF06968 Biotin and Thiamin Synthesis associated domain VV208B2_28240 PF04055 Radical SAM superfamily VV208B2_28250 PF05690 Thiazole biosynthesis protein ThiG VV208B2_28260 PF00899 ThiF family VV208B2_28270 PF02581 Thiamine monophosphate synthase VV208B2_28280 PF13667 ThiC-associated domain VV208B2_28280 PF01964 Radical SAM ThiC family VV208B2_28290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VV208B2_28300 PF07732 Multicopper oxidase VV208B2_28300 PF00394 Multicopper oxidase VV208B2_28300 PF07731 Multicopper oxidase VV208B2_28330 PF13358 DDE superfamily endonuclease VV208B2_28340 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_28350 PF07369 Protein of unknown function (DUF1488) VV208B2_28360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VV208B2_28360 PF01488 Shikimate / quinate 5-dehydrogenase VV208B2_28360 PF08501 Shikimate dehydrogenase substrate binding domain VV208B2_28370 PF01218 Coproporphyrinogen III oxidase VV208B2_28380 PF01300 Telomere recombination VV208B2_28390 PF00731 AIR carboxylase VV208B2_28400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VV208B2_28400 PF02222 ATP-grasp domain VV208B2_28410 PF01609 Transposase DDE domain VV208B2_28410 PF13006 Insertion element 4 transposase N-terminal VV208B2_28420 PF01396 Topoisomerase DNA binding C4 zinc finger VV208B2_28430 PF04361 Protein of unknown function (DUF494) VV208B2_28440 PF02481 DNA recombination-mediator protein A VV208B2_28440 PF17782 DprA winged helix domain VV208B2_28460 PF01327 Polypeptide deformylase VV208B2_28470 PF02911 Formyl transferase, C-terminal domain VV208B2_28470 PF00551 Formyl transferase VV208B2_28480 PF01029 NusB family VV208B2_28480 PF01189 16S rRNA methyltransferase RsmB/F VV208B2_28490 PF02254 TrkA-N domain VV208B2_28490 PF02080 TrkA-C domain VV208B2_28500 PF02386 Cation transport protein VV208B2_28510 PF03006 Haemolysin-III related VV208B2_28520 PF07070 SpoOM protein VV208B2_28530 PF06288 Protein of unknown function (DUF1040) VV208B2_28540 PF12801 4Fe-4S binding domain VV208B2_28540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VV208B2_28540 PF13746 4Fe-4S dicluster domain VV208B2_28550 PF01636 Phosphotransferase enzyme family VV208B2_28560 PF01323 DSBA-like thioredoxin domain VV208B2_28570 PF01553 Acyltransferase VV208B2_28590 PF13335 Magnesium chelatase, subunit ChlI C-terminal VV208B2_28590 PF01078 Magnesium chelatase, subunit ChlI VV208B2_28600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV208B2_28600 PF00205 Thiamine pyrophosphate enzyme, central domain VV208B2_28600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV208B2_28620 PF01063 Amino-transferase class IV VV208B2_28630 PF00920 Dehydratase family VV208B2_28640 PF00291 Pyridoxal-phosphate dependent enzyme VV208B2_28640 PF00585 C-terminal regulatory domain of Threonine dehydratase VV208B2_28650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_28650 PF03466 LysR substrate binding domain VV208B2_28660 PF07690 Major Facilitator Superfamily VV208B2_28670 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_28680 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_28690 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_28690 PF12804 MobA-like NTP transferase domain VV208B2_28700 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VV208B2_28700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VV208B2_28710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV208B2_28710 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV208B2_28720 PF00231 ATP synthase VV208B2_28730 PF00306 ATP synthase alpha/beta chain, C terminal domain VV208B2_28730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV208B2_28730 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV208B2_28740 PF00213 ATP synthase delta (OSCP) subunit VV208B2_28750 PF00430 ATP synthase B/B' CF(0) VV208B2_28760 PF00137 ATP synthase subunit C VV208B2_28770 PF00119 ATP synthase A chain VV208B2_28780 PF03899 ATP synthase I chain VV208B2_28790 PF17762 HTH domain found in ParB protein VV208B2_28790 PF02195 ParB-like nuclease domain VV208B2_28800 PF13614 AAA domain VV208B2_28810 PF02527 rRNA small subunit methyltransferase G VV208B2_28820 PF01134 Glucose inhibited division protein A VV208B2_28820 PF13932 GidA associated domain VV208B2_28830 PF00258 Flavodoxin VV208B2_28840 PF10396 GTP-binding protein TrmE N-terminus VV208B2_28840 PF01926 50S ribosome-binding GTPase VV208B2_28840 PF12631 MnmE helical domain VV208B2_28850 PF14849 YidC periplasmic domain VV208B2_28850 PF02096 60Kd inner membrane protein VV208B2_28860 PF00825 Ribonuclease P VV208B2_28870 PF00005 ABC transporter VV208B2_28880 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_28890 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_28900 PF04740 LXG domain of WXG superfamily VV208B2_28910 PF04634 Protein of unknown function, DUF600 VV208B2_28940 PF01435 Peptidase family M48 VV208B2_28950 PF04011 LemA family VV208B2_28960 PF03606 C4-dicarboxylate anaerobic carrier VV208B2_28970 PF07963 Prokaryotic N-terminal methylation motif VV208B2_28970 PF08334 Type II secretion system (T2SS), protein G VV208B2_28980 PF01523 Putative modulator of DNA gyrase VV208B2_28990 PF01523 Putative modulator of DNA gyrase VV208B2_29000 PF03009 Glycerophosphoryl diester phosphodiesterase family VV208B2_29010 PF07690 Major Facilitator Superfamily VV208B2_29030 PF07968 Leukocidin/Hemolysin toxin family VV208B2_29030 PF00652 Ricin-type beta-trefoil lectin domain VV208B2_29050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_29050 PF00672 HAMP domain VV208B2_29060 PF00672 HAMP domain VV208B2_29060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_29070 PF00128 Alpha amylase, catalytic domain VV208B2_29090 PF01568 Molydopterin dinucleotide binding domain VV208B2_29090 PF00384 Molybdopterin oxidoreductase VV208B2_29090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV208B2_29090 PF04324 BFD-like [2Fe-2S] binding domain VV208B2_29100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV208B2_29100 PF14824 Sirohaem biosynthesis protein central VV208B2_29100 PF10414 Sirohaem synthase dimerisation region VV208B2_29110 PF00591 Glycosyl transferase family, a/b domain VV208B2_29110 PF02885 Glycosyl transferase family, helical bundle domain VV208B2_29120 PF01738 Dienelactone hydrolase family VV208B2_29130 PF03861 ANTAR domain VV208B2_29130 PF08376 Nitrate and nitrite sensing VV208B2_29140 PF00005 ABC transporter VV208B2_29150 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_29160 PF00005 ABC transporter VV208B2_29170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VV208B2_29170 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_29170 PF13806 Rieske-like [2Fe-2S] domain VV208B2_29170 PF18267 Rubredoxin NAD+ reductase C-terminal domain VV208B2_29170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VV208B2_29170 PF04324 BFD-like [2Fe-2S] binding domain VV208B2_29200 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_29220 PF02492 CobW/HypB/UreG, nucleotide-binding domain VV208B2_29220 PF07683 Cobalamin synthesis protein cobW C-terminal domain VV208B2_29240 PF00270 DEAD/DEAH box helicase VV208B2_29240 PF00271 Helicase conserved C-terminal domain VV208B2_29250 PF00491 Arginase family VV208B2_29270 PF00563 EAL domain VV208B2_29270 PF01590 GAF domain VV208B2_29270 PF00360 Phytochrome region VV208B2_29270 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_29280 PF01339 CheB methylesterase VV208B2_29290 PF01739 CheR methyltransferase, SAM binding domain VV208B2_29290 PF03705 CheR methyltransferase, all-alpha domain VV208B2_29300 PF00672 HAMP domain VV208B2_29300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_29300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_29300 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_29300 PF01627 Hpt domain VV208B2_29300 PF00072 Response regulator receiver domain VV208B2_29310 PF01575 MaoC like domain VV208B2_29340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_29340 PF00672 HAMP domain VV208B2_29350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VV208B2_29350 PF04324 BFD-like [2Fe-2S] binding domain VV208B2_29350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VV208B2_29350 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_29350 PF18267 Rubredoxin NAD+ reductase C-terminal domain VV208B2_29360 PF13806 Rieske-like [2Fe-2S] domain VV208B2_29380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV208B2_29380 PF14824 Sirohaem biosynthesis protein central VV208B2_29380 PF10414 Sirohaem synthase dimerisation region VV208B2_29420 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_29430 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_29440 PF02472 Biopolymer transport protein ExbD/TolR VV208B2_29470 PF03605 Anaerobic c4-dicarboxylate membrane transporter VV208B2_29480 PF17200 Single Cache domain 2 VV208B2_29480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_29480 PF00672 HAMP domain VV208B2_29500 PF11756 Nitrous oxide-stimulated promoter VV208B2_29510 PF01554 MatE VV208B2_29520 PF12833 Helix-turn-helix domain VV208B2_29530 PF07690 Major Facilitator Superfamily VV208B2_29540 PF00085 Thioredoxin VV208B2_29550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VV208B2_29550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VV208B2_29580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV208B2_29580 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_29610 PF04143 Sulphur transport VV208B2_29640 PF00873 AcrB/AcrD/AcrF family VV208B2_29660 PF03477 ATP cone domain VV208B2_29660 PF13597 Anaerobic ribonucleoside-triphosphate reductase VV208B2_29690 PF12729 Four helix bundle sensory module for signal transduction VV208B2_29690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_29690 PF00672 HAMP domain VV208B2_29700 PF00155 Aminotransferase class I and II VV208B2_29710 PF18030 RimK PreATP-grasp domain VV208B2_29710 PF08443 RimK-like ATP-grasp domain VV208B2_29740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV208B2_29740 PF07685 CobB/CobQ-like glutamine amidotransferase domain VV208B2_29760 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_29770 PF03459 TOBE domain VV208B2_29770 PF00005 ABC transporter VV208B2_29780 PF00892 EamA-like transporter family VV208B2_29790 PF01047 MarR family VV208B2_29810 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_29810 PF08448 PAS fold VV208B2_29830 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_29860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VV208B2_29860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VV208B2_29860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VV208B2_29870 PF02233 NAD(P) transhydrogenase beta subunit VV208B2_29890 PF00072 Response regulator receiver domain VV208B2_29890 PF00486 Transcriptional regulatory protein, C terminal VV208B2_29920 PF03701 Uncharacterised protein family (UPF0181) VV208B2_29940 PF01253 Translation initiation factor SUI1 VV208B2_29960 PF07478 D-ala D-ala ligase C-terminus VV208B2_29960 PF01820 D-ala D-ala ligase N-terminus VV208B2_29970 PF05036 Sporulation related domain VV208B2_29980 PF13607 Succinyl-CoA ligase like flavodoxin domain VV208B2_29980 PF13380 CoA binding domain VV208B2_29980 PF00583 Acetyltransferase (GNAT) family VV208B2_29990 PF03466 LysR substrate binding domain VV208B2_29990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_30000 PF07715 TonB-dependent Receptor Plug Domain VV208B2_30000 PF04886 PT repeat VV208B2_30000 PF00593 TonB dependent receptor VV208B2_30010 PF05231 MASE1 VV208B2_30010 PF08447 PAS fold VV208B2_30010 PF08448 PAS fold VV208B2_30010 PF13426 PAS domain VV208B2_30010 PF00563 EAL domain VV208B2_30010 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_30030 PF03746 LamB/YcsF family VV208B2_30040 PF02682 Carboxyltransferase domain, subdomain C and D VV208B2_30050 PF02626 Carboxyltransferase domain, subdomain A and B VV208B2_30060 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VV208B2_30060 PF01266 FAD dependent oxidoreductase VV208B2_30080 PF00005 ABC transporter VV208B2_30090 PF13472 GDSL-like Lipase/Acylhydrolase family VV208B2_30100 PF07055 Enoyl reductase FAD binding domain VV208B2_30100 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VV208B2_30100 PF12241 Trans-2-enoyl-CoA reductase catalytic region VV208B2_30110 PF00563 EAL domain VV208B2_30110 PF00498 FHA domain VV208B2_30110 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_30140 PF00226 DnaJ domain VV208B2_30140 PF00684 DnaJ central domain VV208B2_30140 PF01556 DnaJ C terminal domain VV208B2_30180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_30180 PF03466 LysR substrate binding domain VV208B2_30190 PF00128 Alpha amylase, catalytic domain VV208B2_30190 PF16657 Maltogenic Amylase, C-terminal domain VV208B2_30210 PF12793 Sugar transport-related sRNA regulator N-term VV208B2_30210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_30230 PF03061 Thioesterase superfamily VV208B2_30260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV208B2_30270 PF12262 Bacterial virulence factor lipase N-terminal VV208B2_30300 PF00491 Arginase family VV208B2_30310 PF00892 EamA-like transporter family VV208B2_30330 PF03741 Integral membrane protein TerC family VV208B2_30340 PF02872 5'-nucleotidase, C-terminal domain VV208B2_30340 PF00149 Calcineurin-like phosphoesterase VV208B2_30350 PF11398 Protein of unknown function (DUF2813) VV208B2_30360 PF06496 Protein of unknown function (DUF1097) VV208B2_30370 PF03466 LysR substrate binding domain VV208B2_30370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_30380 PF01226 Formate/nitrite transporter VV208B2_30390 PF04264 YceI-like domain VV208B2_30400 PF01292 Prokaryotic cytochrome b561 VV208B2_30430 PF00271 Helicase conserved C-terminal domain VV208B2_30430 PF00270 DEAD/DEAH box helicase VV208B2_30440 PF04336 Acyl carrier protein phosphodiesterase VV208B2_30460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_30460 PF00672 HAMP domain VV208B2_30470 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_30480 PF11849 Domain of unknown function (DUF3369) VV208B2_30510 PF00294 pfkB family carbohydrate kinase VV208B2_30520 PF01268 Formate--tetrahydrofolate ligase VV208B2_30530 PF00483 Nucleotidyl transferase VV208B2_30540 PF06483 Chitinase C VV208B2_30540 PF00704 Glycosyl hydrolases family 18 VV208B2_30550 PF06719 AraC-type transcriptional regulator N-terminus VV208B2_30550 PF12833 Helix-turn-helix domain VV208B2_30560 PF00465 Iron-containing alcohol dehydrogenase VV208B2_30570 PF02954 Bacterial regulatory protein, Fis family VV208B2_30570 PF00072 Response regulator receiver domain VV208B2_30570 PF14532 Sigma-54 interaction domain VV208B2_30580 PF02743 Cache domain VV208B2_30580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_30580 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_30600 PF07690 Major Facilitator Superfamily VV208B2_30610 PF00224 Pyruvate kinase, barrel domain VV208B2_30610 PF02887 Pyruvate kinase, alpha/beta domain VV208B2_30660 PF00356 Bacterial regulatory proteins, lacI family VV208B2_30660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV208B2_30670 PF00381 PTS HPr component phosphorylation site VV208B2_30670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_30680 PF00294 pfkB family carbohydrate kinase VV208B2_30690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV208B2_30690 PF02378 Phosphotransferase system, EIIC VV208B2_30710 PF00873 AcrB/AcrD/AcrF family VV208B2_30760 PF08669 Glycine cleavage T-protein C-terminal barrel domain VV208B2_30760 PF01571 Aminomethyltransferase folate-binding domain VV208B2_30780 PF00464 Serine hydroxymethyltransferase VV208B2_30790 PF01597 Glycine cleavage H-protein VV208B2_30800 PF02347 Glycine cleavage system P-protein VV208B2_30820 PF00005 ABC transporter VV208B2_30820 PF00664 ABC transporter transmembrane region VV208B2_30840 PF00795 Carbon-nitrogen hydrolase VV208B2_30840 PF02540 NAD synthase VV208B2_30920 PF13533 Biotin-lipoyl like VV208B2_30930 PF07690 Major Facilitator Superfamily VV208B2_30970 PF08774 VRR-NUC domain VV208B2_30970 PF18081 Fanconi anemia-associated nuclease SAP domain VV208B2_30990 PF04055 Radical SAM superfamily VV208B2_30990 PF13186 Iron-sulfur cluster-binding domain VV208B2_31000 PF03781 Sulfatase-modifying factor enzyme 1 VV208B2_31010 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase VV208B2_31020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_31020 PF03466 LysR substrate binding domain VV208B2_31050 PF00092 von Willebrand factor type A domain VV208B2_31080 PF17863 AAA lid domain VV208B2_31080 PF07726 ATPase family associated with various cellular activities (AAA) VV208B2_31090 PF13186 Iron-sulfur cluster-binding domain VV208B2_31090 PF04055 Radical SAM superfamily VV208B2_31100 PF00884 Sulfatase VV208B2_31110 PF03466 LysR substrate binding domain VV208B2_31110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_31120 PF00884 Sulfatase VV208B2_31130 PF00871 Acetokinase family VV208B2_31140 PF00270 DEAD/DEAH box helicase VV208B2_31140 PF00271 Helicase conserved C-terminal domain VV208B2_31140 PF03880 DbpA RNA binding domain VV208B2_31150 PF00773 RNB domain VV208B2_31150 PF08206 Ribonuclease B OB domain VV208B2_31150 PF00575 S1 RNA binding domain VV208B2_31160 PF12833 Helix-turn-helix domain VV208B2_31180 PF12849 PBP superfamily domain VV208B2_31200 PF00563 EAL domain VV208B2_31200 PF03707 Bacterial signalling protein N terminal repeat VV208B2_31200 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_31230 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_31230 PF00563 EAL domain VV208B2_31230 PF00498 FHA domain VV208B2_31240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_31240 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_31240 PF09456 RcsC Alpha-Beta-Loop (ABL) VV208B2_31240 PF00072 Response regulator receiver domain VV208B2_31250 PF03880 DbpA RNA binding domain VV208B2_31250 PF00270 DEAD/DEAH box helicase VV208B2_31250 PF00271 Helicase conserved C-terminal domain VV208B2_31260 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB VV208B2_31270 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VV208B2_31300 PF03264 NapC/NirT cytochrome c family, N-terminal region VV208B2_31310 PF03781 Sulfatase-modifying factor enzyme 1 VV208B2_31350 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_31350 PF00672 HAMP domain VV208B2_31350 PF01627 Hpt domain VV208B2_31350 PF00072 Response regulator receiver domain VV208B2_31350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_31360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV208B2_31370 PF02142 MGS-like domain VV208B2_31380 PF13361 UvrD-like helicase C-terminal domain VV208B2_31380 PF00580 UvrD/REP helicase N-terminal domain VV208B2_31380 PF12462 DNA helicase IV / RNA helicase N terminal VV208B2_31390 PF12805 FUSC-like inner membrane protein yccS VV208B2_31460 PF13411 MerR HTH family regulatory protein VV208B2_31470 PF00005 ABC transporter VV208B2_31480 PF01032 FecCD transport family VV208B2_31490 PF01032 FecCD transport family VV208B2_31540 PF12464 Maltose acetyltransferase VV208B2_31540 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_31550 PF12431 Transcriptional regulator VV208B2_31550 PF00072 Response regulator receiver domain VV208B2_31560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_31560 PF00989 PAS fold VV208B2_31560 PF17203 Single cache domain 3 VV208B2_31560 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VV208B2_31570 PF00939 Sodium:sulfate symporter transmembrane region VV208B2_31700 PF00437 Type II/IV secretion system protein VV208B2_31730 PF00263 Bacterial type II and III secretion system protein VV208B2_31730 PF13629 Pilus formation protein N terminal region VV208B2_31730 PF04972 BON domain VV208B2_31760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_31760 PF03466 LysR substrate binding domain VV208B2_31780 PF13476 AAA domain VV208B2_31790 PF12320 Type 5 capsule protein repressor C-terminal domain VV208B2_31790 PF00149 Calcineurin-like phosphoesterase VV208B2_31800 PF00072 Response regulator receiver domain VV208B2_31810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_31810 PF00072 Response regulator receiver domain VV208B2_31810 PF01627 Hpt domain VV208B2_31810 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_31810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_31810 PF00672 HAMP domain VV208B2_31840 PF13581 Histidine kinase-like ATPase domain VV208B2_31860 PF08678 Rsbr N terminal VV208B2_31860 PF01740 STAS domain VV208B2_31870 PF12729 Four helix bundle sensory module for signal transduction VV208B2_31870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_31870 PF00672 HAMP domain VV208B2_31880 PF01926 50S ribosome-binding GTPase VV208B2_31890 PF00583 Acetyltransferase (GNAT) family VV208B2_31910 PF01584 CheW-like domain VV208B2_31910 PF00072 Response regulator receiver domain VV208B2_31930 PF00356 Bacterial regulatory proteins, lacI family VV208B2_31940 PF00294 pfkB family carbohydrate kinase VV208B2_31950 PF13407 Periplasmic binding protein domain VV208B2_31960 PF02653 Branched-chain amino acid transport system / permease component VV208B2_31970 PF00005 ABC transporter VV208B2_31980 PF05025 RbsD / FucU transport protein family VV208B2_32010 PF04237 YjbR VV208B2_32020 PF05762 VWA domain containing CoxE-like protein VV208B2_32030 PF07728 AAA domain (dynein-related subfamily) VV208B2_32030 PF17868 AAA lid domain VV208B2_32030 PF12592 Protein of unknown function (DUF3763) VV208B2_32050 PF01212 Beta-eliminating lyase VV208B2_32060 PF00034 Cytochrome c VV208B2_32070 PF00171 Aldehyde dehydrogenase family VV208B2_32080 PF03606 C4-dicarboxylate anaerobic carrier VV208B2_32100 PF01569 PAP2 superfamily VV208B2_32110 PF04266 ASCH domain VV208B2_32130 PF00892 EamA-like transporter family VV208B2_32140 PF18416 N-acetylglucosamine binding protein domain 2 VV208B2_32140 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VV208B2_32160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_32160 PF02743 Cache domain VV208B2_32160 PF00672 HAMP domain VV208B2_32190 PF00149 Calcineurin-like phosphoesterase VV208B2_32200 PF03222 Tryptophan/tyrosine permease family VV208B2_32240 PF07504 Fungalysin/Thermolysin Propeptide Motif VV208B2_32240 PF03413 Peptidase propeptide and YPEB domain VV208B2_32240 PF01447 Thermolysin metallopeptidase, catalytic domain VV208B2_32240 PF02868 Thermolysin metallopeptidase, alpha-helical domain VV208B2_32250 PF13194 Domain of unknown function (DUF4010) VV208B2_32260 PF00873 AcrB/AcrD/AcrF family VV208B2_32270 PF13533 Biotin-lipoyl like VV208B2_32320 PF00581 Rhodanese-like domain VV208B2_32330 PF00012 Hsp70 protein VV208B2_32340 PF00465 Iron-containing alcohol dehydrogenase VV208B2_32360 PF07995 Glucose / Sorbosone dehydrogenase VV208B2_32370 PF17676 LD-carboxypeptidase C-terminal domain VV208B2_32370 PF02016 LD-carboxypeptidase N-terminal domain VV208B2_32400 PF02754 Cysteine-rich domain VV208B2_32400 PF13183 4Fe-4S dicluster domain VV208B2_32410 PF00890 FAD binding domain VV208B2_32420 PF01266 FAD dependent oxidoreductase VV208B2_32420 PF04324 BFD-like [2Fe-2S] binding domain VV208B2_32460 PF03618 Kinase/pyrophosphorylase VV208B2_32470 PF00391 PEP-utilising enzyme, mobile domain VV208B2_32470 PF02896 PEP-utilising enzyme, TIM barrel domain VV208B2_32470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VV208B2_32490 PF04224 Protein of unknown function, DUF417 VV208B2_32500 PF00005 ABC transporter VV208B2_32500 PF00571 CBS domain VV208B2_32510 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_32520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VV208B2_32530 PF00732 GMC oxidoreductase VV208B2_32530 PF05199 GMC oxidoreductase VV208B2_32540 PF00171 Aldehyde dehydrogenase family VV208B2_32550 PF00440 Bacterial regulatory proteins, tetR family VV208B2_32550 PF13977 BetI-type transcriptional repressor, C-terminal VV208B2_32590 PF07943 Penicillin-binding protein 5, C-terminal domain VV208B2_32590 PF00768 D-alanyl-D-alanine carboxypeptidase VV208B2_32630 PF03313 Serine dehydratase alpha chain VV208B2_32630 PF03315 Serine dehydratase beta chain VV208B2_32640 PF00854 POT family VV208B2_32660 PF03466 LysR substrate binding domain VV208B2_32660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_32670 PF01266 FAD dependent oxidoreductase VV208B2_32690 PF00392 Bacterial regulatory proteins, gntR family VV208B2_32690 PF07702 UTRA domain VV208B2_32700 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_32710 PF00005 ABC transporter VV208B2_32730 PF00266 Aminotransferase class-V VV208B2_32740 PF00202 Aminotransferase class-III VV208B2_32750 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_32760 PF12833 Helix-turn-helix domain VV208B2_32760 PF01497 Periplasmic binding protein VV208B2_32770 PF00155 Aminotransferase class I and II VV208B2_32790 PF00672 HAMP domain VV208B2_32790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_32820 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_32830 PF03466 LysR substrate binding domain VV208B2_32830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_32860 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_32860 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_32860 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VV208B2_32870 PF02566 OsmC-like protein VV208B2_32880 PF01625 Peptide methionine sulfoxide reductase VV208B2_32880 PF01641 SelR domain VV208B2_32890 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_32920 PF12729 Four helix bundle sensory module for signal transduction VV208B2_32920 PF00672 HAMP domain VV208B2_32920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_32930 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_32930 PF03707 Bacterial signalling protein N terminal repeat VV208B2_32930 PF00563 EAL domain VV208B2_32960 PF07670 Nucleoside recognition VV208B2_32960 PF01773 Na+ dependent nucleoside transporter N-terminus VV208B2_32960 PF07662 Na+ dependent nucleoside transporter C-terminus VV208B2_33000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VV208B2_33000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV208B2_33030 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_33040 PF08525 Opacity-associated protein A N-terminal motif VV208B2_33040 PF01551 Peptidase family M23 VV208B2_33040 PF01476 LysM domain VV208B2_33080 PF07670 Nucleoside recognition VV208B2_33110 PF00672 HAMP domain VV208B2_33110 PF02743 Cache domain VV208B2_33110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_33120 PF00672 HAMP domain VV208B2_33120 PF02743 Cache domain VV208B2_33120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_33130 PF00128 Alpha amylase, catalytic domain VV208B2_33140 PF00582 Universal stress protein family VV208B2_33160 PF01584 CheW-like domain VV208B2_33160 PF00072 Response regulator receiver domain VV208B2_33180 PF01243 Pyridoxamine 5'-phosphate oxidase VV208B2_33190 PF06228 Haem utilisation ChuX/HutX VV208B2_33200 PF04055 Radical SAM superfamily VV208B2_33210 PF03544 Gram-negative bacterial TonB protein C-terminal VV208B2_33220 PF01618 MotA/TolQ/ExbB proton channel family VV208B2_33230 PF02472 Biopolymer transport protein ExbD/TolR VV208B2_33250 PF01032 FecCD transport family VV208B2_33260 PF00005 ABC transporter VV208B2_33350 PF02540 NAD synthase VV208B2_33360 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_33360 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_33360 PF03473 MOSC domain VV208B2_33360 PF03476 MOSC N-terminal beta barrel domain VV208B2_33360 PF03473 MOSC domain VV208B2_33360 PF03476 MOSC N-terminal beta barrel domain VV208B2_33370 PF01979 Amidohydrolase family VV208B2_33380 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_33380 PF17151 Periplasmic sensor domain VV208B2_33390 PF05661 Protein of unknown function (DUF808) VV208B2_33450 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_33460 PF14785 Maltose transport system permease protein MalF P2 domain VV208B2_33460 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_33470 PF01547 Bacterial extracellular solute-binding protein VV208B2_33480 PF00005 ABC transporter VV208B2_33480 PF08402 TOBE domain VV208B2_33490 PF02397 Bacterial sugar transferase VV208B2_33510 PF02563 Polysaccharide biosynthesis/export protein VV208B2_33510 PF10531 SLBB domain VV208B2_33520 PF13614 AAA domain VV208B2_33520 PF13807 G-rich domain on putative tyrosine kinase VV208B2_33520 PF02706 Chain length determinant protein VV208B2_33530 PF13439 Glycosyltransferase Family 4 VV208B2_33530 PF00534 Glycosyl transferases group 1 VV208B2_33550 PF00534 Glycosyl transferases group 1 VV208B2_33550 PF13439 Glycosyltransferase Family 4 VV208B2_33580 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_33590 PF00664 ABC transporter transmembrane region VV208B2_33590 PF00005 ABC transporter VV208B2_33610 PF00196 Bacterial regulatory proteins, luxR family VV208B2_33620 PF00196 Bacterial regulatory proteins, luxR family VV208B2_33640 PF00672 HAMP domain VV208B2_33640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_33640 PF02743 Cache domain VV208B2_33650 PF17863 AAA lid domain VV208B2_33650 PF07726 ATPase family associated with various cellular activities (AAA) VV208B2_33660 PF01882 Protein of unknown function DUF58 VV208B2_33690 PF07584 Aerotolerance regulator N-terminal VV208B2_33690 PF13519 von Willebrand factor type A domain VV208B2_33710 PF00360 Phytochrome region VV208B2_33710 PF01590 GAF domain VV208B2_33710 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_33710 PF00563 EAL domain VV208B2_33730 PF00005 ABC transporter VV208B2_33740 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_33750 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_33760 PF12849 PBP superfamily domain VV208B2_33770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_33770 PF12729 Four helix bundle sensory module for signal transduction VV208B2_33770 PF00672 HAMP domain VV208B2_33810 PF00593 TonB dependent receptor VV208B2_33810 PF07715 TonB-dependent Receptor Plug Domain VV208B2_33820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VV208B2_33820 PF00326 Prolyl oligopeptidase family VV208B2_33830 PF00270 DEAD/DEAH box helicase VV208B2_33830 PF00271 Helicase conserved C-terminal domain VV208B2_33850 PF03734 L,D-transpeptidase catalytic domain VV208B2_33850 PF17969 L,D-transpeptidase C-terminal domain VV208B2_33850 PF01476 LysM domain VV208B2_33860 PF03441 FAD binding domain of DNA photolyase VV208B2_33860 PF00875 DNA photolyase VV208B2_33870 PF13411 MerR HTH family regulatory protein VV208B2_33880 PF08349 Protein of unknown function (DUF1722) VV208B2_33890 PF01048 Phosphorylase superfamily VV208B2_33920 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_33930 PF11742 Protein of unknown function (DUF3302) VV208B2_33940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_33940 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_33950 PF07155 ECF-type riboflavin transporter, S component VV208B2_33960 PF12558 ATP-binding cassette cobalt transporter VV208B2_33960 PF00005 ABC transporter VV208B2_33990 PF07676 WD40-like Beta Propeller Repeat VV208B2_33990 PF03572 Peptidase family S41 VV208B2_33990 PF14685 Tricorn protease PDZ domain VV208B2_33990 PF14684 Tricorn protease C1 domain VV208B2_34000 PF13302 Acetyltransferase (GNAT) domain VV208B2_34020 PF07238 PilZ domain VV208B2_34020 PF12945 Flagellar protein YcgR VV208B2_34030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_34030 PF00672 HAMP domain VV208B2_34050 PF00924 Mechanosensitive ion channel VV208B2_34060 PF00194 Eukaryotic-type carbonic anhydrase VV208B2_34070 PF12849 PBP superfamily domain VV208B2_34090 PF02321 Outer membrane efflux protein VV208B2_34100 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_34110 PF00664 ABC transporter transmembrane region VV208B2_34110 PF03412 Peptidase C39 family VV208B2_34110 PF00005 ABC transporter VV208B2_34130 PF04076 Bacterial OB fold (BOF) protein VV208B2_34140 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_34140 PF00072 Response regulator receiver domain VV208B2_34140 PF09456 RcsC Alpha-Beta-Loop (ABL) VV208B2_34140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_34150 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_34150 PF00563 EAL domain VV208B2_34150 PF03707 Bacterial signalling protein N terminal repeat VV208B2_34160 PF00196 Bacterial regulatory proteins, luxR family VV208B2_34160 PF00072 Response regulator receiver domain VV208B2_34170 PF03707 Bacterial signalling protein N terminal repeat VV208B2_34170 PF00563 EAL domain VV208B2_34170 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_34180 PF00196 Bacterial regulatory proteins, luxR family VV208B2_34180 PF00072 Response regulator receiver domain VV208B2_34210 PF01593 Flavin containing amine oxidoreductase VV208B2_34230 PF03466 LysR substrate binding domain VV208B2_34230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_34280 PF08212 Lipocalin-like domain VV208B2_34360 PF08240 Alcohol dehydrogenase GroES-like domain VV208B2_34360 PF00107 Zinc-binding dehydrogenase VV208B2_34370 PF00155 Aminotransferase class I and II VV208B2_34380 PF00657 GDSL-like Lipase/Acylhydrolase VV208B2_34390 PF05922 Peptidase inhibitor I9 VV208B2_34390 PF00082 Subtilase family VV208B2_34410 PF07690 Major Facilitator Superfamily VV208B2_34420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_34420 PF03466 LysR substrate binding domain VV208B2_34430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_34450 PF00199 Catalase VV208B2_34450 PF06628 Catalase-related immune-responsive VV208B2_34470 PF00080 Copper/zinc superoxide dismutase (SODC) VV208B2_34510 PF01966 HD domain VV208B2_34530 PF03466 LysR substrate binding domain VV208B2_34530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_34540 PF01906 Putative heavy-metal-binding VV208B2_34570 PF00563 EAL domain VV208B2_34570 PF03707 Bacterial signalling protein N terminal repeat VV208B2_34570 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_34590 PF00593 TonB dependent receptor VV208B2_34590 PF07715 TonB-dependent Receptor Plug Domain VV208B2_34600 PF13416 Bacterial extracellular solute-binding protein VV208B2_34610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VV208B2_34610 PF00056 lactate/malate dehydrogenase, NAD binding domain VV208B2_34650 PF07690 Major Facilitator Superfamily VV208B2_34670 PF10928 Protein of unknown function (DUF2810) VV208B2_34690 PF04013 Putative SAM-dependent RNA methyltransferase VV208B2_34700 PF08543 Phosphomethylpyrimidine kinase VV208B2_34710 PF01569 PAP2 superfamily VV208B2_34760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VV208B2_34770 PF00282 Pyridoxal-dependent decarboxylase conserved domain VV208B2_34780 PF01323 DSBA-like thioredoxin domain VV208B2_34820 PF03466 LysR substrate binding domain VV208B2_34820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_34830 PF00106 short chain dehydrogenase VV208B2_34840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_34840 PF03466 LysR substrate binding domain VV208B2_34860 PF00072 Response regulator receiver domain VV208B2_34860 PF00486 Transcriptional regulatory protein, C terminal VV208B2_34870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_34870 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_34870 PF00672 HAMP domain VV208B2_34880 PF01219 Prokaryotic diacylglycerol kinase VV208B2_34890 PF00884 Sulfatase VV208B2_34890 PF08019 Phosphoethanolamine transferase EptA/EptB VV208B2_34900 PF00884 Sulfatase VV208B2_34920 PF16657 Maltogenic Amylase, C-terminal domain VV208B2_34920 PF02903 Alpha amylase, N-terminal ig-like domain VV208B2_34920 PF00128 Alpha amylase, catalytic domain VV208B2_34930 PF04231 Endonuclease I VV208B2_34960 PF13358 DDE superfamily endonuclease VV208B2_34970 PF08448 PAS fold VV208B2_34970 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_34990 PF00155 Aminotransferase class I and II VV208B2_34990 PF00392 Bacterial regulatory proteins, gntR family VV208B2_35050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VV208B2_35060 PF05958 tRNA (Uracil-5-)-methyltransferase VV208B2_35070 PF00881 Nitroreductase family VV208B2_35090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_35090 PF03466 LysR substrate binding domain VV208B2_35160 PF00375 Sodium:dicarboxylate symporter family VV208B2_35170 PF03466 LysR substrate binding domain VV208B2_35170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_35180 PF00764 Arginosuccinate synthase VV208B2_35220 PF01638 HxlR-like helix-turn-helix VV208B2_35230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_35230 PF03466 LysR substrate binding domain VV208B2_35270 PF01048 Phosphorylase superfamily VV208B2_35280 PF04973 Nicotinamide mononucleotide transporter VV208B2_35300 PF03717 Penicillin-binding Protein dimerisation domain VV208B2_35300 PF00905 Penicillin binding protein transpeptidase domain VV208B2_35320 PF04151 Bacterial pre-peptidase C-terminal domain VV208B2_35320 PF08453 Peptidase family M9 N-terminal VV208B2_35320 PF01752 Collagenase VV208B2_35330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_35340 PF01048 Phosphorylase superfamily VV208B2_35350 PF01238 Phosphomannose isomerase type I VV208B2_35360 PF00155 Aminotransferase class I and II VV208B2_35370 PF02378 Phosphotransferase system, EIIC VV208B2_35370 PF00367 phosphotransferase system, EIIB VV208B2_35380 PF00356 Bacterial regulatory proteins, lacI family VV208B2_35380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV208B2_35400 PF12838 4Fe-4S dicluster domain VV208B2_35400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV208B2_35400 PF00384 Molybdopterin oxidoreductase VV208B2_35400 PF01568 Molydopterin dinucleotide binding domain VV208B2_35400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VV208B2_35460 PF00392 Bacterial regulatory proteins, gntR family VV208B2_35460 PF00155 Aminotransferase class I and II VV208B2_35500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV208B2_35520 PF12833 Helix-turn-helix domain VV208B2_35530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV208B2_35530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_35530 PF02378 Phosphotransferase system, EIIC VV208B2_35540 PF01238 Phosphomannose isomerase type I VV208B2_35580 PF18113 Rubredoxin binding C-terminal domain VV208B2_35580 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_35590 PF00301 Rubredoxin VV208B2_35590 PF00753 Metallo-beta-lactamase superfamily VV208B2_35590 PF00258 Flavodoxin VV208B2_35600 PF01590 GAF domain VV208B2_35600 PF00158 Sigma-54 interaction domain VV208B2_35620 PF12833 Helix-turn-helix domain VV208B2_35630 PF00593 TonB dependent receptor VV208B2_35630 PF07715 TonB-dependent Receptor Plug Domain VV208B2_35650 PF00037 4Fe-4S binding domain VV208B2_35650 PF11953 Domain of unknown function (DUF3470) VV208B2_35660 PF08032 RNA 2'-O ribose methyltransferase substrate binding VV208B2_35660 PF00588 SpoU rRNA Methylase family VV208B2_35690 PF16875 Glycosyl hydrolase family 36 N-terminal domain VV208B2_35690 PF16874 Glycosyl hydrolase family 36 C-terminal domain VV208B2_35700 PF02929 Beta galactosidase small chain VV208B2_35700 PF16353 Domain of unknown function(DUF4981) VV208B2_35700 PF00703 Glycosyl hydrolases family 2 VV208B2_35700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VV208B2_35700 PF02837 Glycosyl hydrolases family 2, sugar binding domain VV208B2_35710 PF13407 Periplasmic binding protein domain VV208B2_35720 PF00005 ABC transporter VV208B2_35730 PF02653 Branched-chain amino acid transport system / permease component VV208B2_35740 PF00356 Bacterial regulatory proteins, lacI family VV208B2_35770 PF00873 AcrB/AcrD/AcrF family VV208B2_35780 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_35780 PF17151 Periplasmic sensor domain VV208B2_35790 PF00849 RNA pseudouridylate synthase VV208B2_35870 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_35870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_35890 PF01554 MatE VV208B2_35900 PF14310 Fibronectin type III-like domain VV208B2_35900 PF00933 Glycosyl hydrolase family 3 N terminal domain VV208B2_35900 PF01915 Glycosyl hydrolase family 3 C-terminal domain VV208B2_35910 PF12833 Helix-turn-helix domain VV208B2_35920 PF02264 LamB porin VV208B2_35930 PF00722 Glycosyl hydrolases family 16 VV208B2_35950 PF00356 Bacterial regulatory proteins, lacI family VV208B2_35970 PF00005 ABC transporter VV208B2_35970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_35980 PF00005 ABC transporter VV208B2_35980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_35990 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_36000 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_36010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_36030 PF00356 Bacterial regulatory proteins, lacI family VV208B2_36040 PF08402 TOBE domain VV208B2_36040 PF00005 ABC transporter VV208B2_36050 PF00232 Glycosyl hydrolase family 1 VV208B2_36060 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_36070 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_36090 PF00356 Bacterial regulatory proteins, lacI family VV208B2_36110 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_36130 PF00501 AMP-binding enzyme VV208B2_36160 PF00072 Response regulator receiver domain VV208B2_36160 PF00486 Transcriptional regulatory protein, C terminal VV208B2_36170 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_36170 PF08521 Two-component sensor kinase N-terminal VV208B2_36170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_36190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_36190 PF00672 HAMP domain VV208B2_36190 PF02743 Cache domain VV208B2_36200 PF03466 LysR substrate binding domain VV208B2_36200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_36220 PF05193 Peptidase M16 inactive domain VV208B2_36220 PF00675 Insulinase (Peptidase family M16) VV208B2_36230 PF02690 Na+/Pi-cotransporter VV208B2_36240 PF01966 HD domain VV208B2_36250 PF02798 Glutathione S-transferase, N-terminal domain VV208B2_36260 PF00171 Aldehyde dehydrogenase family VV208B2_36290 PF02743 Cache domain VV208B2_36290 PF00672 HAMP domain VV208B2_36290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_36330 PF01470 Pyroglutamyl peptidase VV208B2_36350 PF01037 Lrp/AsnC ligand binding domain VV208B2_36360 PF01810 LysE type translocator VV208B2_36370 PF00919 Uncharacterized protein family UPF0004 VV208B2_36370 PF04055 Radical SAM superfamily VV208B2_36370 PF18693 TRAM domain VV208B2_36380 PF00672 HAMP domain VV208B2_36380 PF16591 Helical bimodular sensor domain VV208B2_36380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_36390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VV208B2_36390 PF00128 Alpha amylase, catalytic domain VV208B2_36390 PF02806 Alpha amylase, C-terminal all-beta domain VV208B2_36400 PF02446 4-alpha-glucanotransferase VV208B2_36410 PF00343 Carbohydrate phosphorylase VV208B2_36420 PF17874 MalT-like TPR region VV208B2_36420 PF00196 Bacterial regulatory proteins, luxR family VV208B2_36470 PF02630 SCO1/SenC VV208B2_36480 PF04314 Copper chaperone PCu(A)C VV208B2_36490 PF03193 RsgA GTPase VV208B2_36500 PF00375 Sodium:dicarboxylate symporter family VV208B2_36510 PF08543 Phosphomethylpyrimidine kinase VV208B2_36520 PF13520 Amino acid permease VV208B2_36530 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VV208B2_36530 PF01276 Orn/Lys/Arg decarboxylase, major domain VV208B2_36530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VV208B2_36540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VV208B2_36540 PF11852 Domain of unknown function (DUF3372) VV208B2_36540 PF03714 Bacterial pullanase-associated domain VV208B2_36540 PF18494 Pullulanase Ins domain VV208B2_36540 PF17967 Pullulanase N2 domain VV208B2_36560 PF02903 Alpha amylase, N-terminal ig-like domain VV208B2_36560 PF00128 Alpha amylase, catalytic domain VV208B2_36560 PF16657 Maltogenic Amylase, C-terminal domain VV208B2_36570 PF01547 Bacterial extracellular solute-binding protein VV208B2_36590 PF07148 Maltose operon periplasmic protein precursor (MalM) VV208B2_36600 PF02264 LamB porin VV208B2_36610 PF00128 Alpha amylase, catalytic domain VV208B2_36610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VV208B2_36620 PF17158 Membrane-associated sensor, integral membrane domain VV208B2_36620 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_36640 PF00563 EAL domain VV208B2_36640 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_36660 PF02678 Pirin VV208B2_36660 PF05726 Pirin C-terminal cupin domain VV208B2_36670 PF06865 Pyrimidine/purine nucleoside phosphorylase VV208B2_36690 PF08329 Chitinase A, N-terminal domain VV208B2_36690 PF00704 Glycosyl hydrolases family 18 VV208B2_36710 PF08361 MAATS-type transcriptional repressor, C-terminal region VV208B2_36710 PF00440 Bacterial regulatory proteins, tetR family VV208B2_36730 PF03600 Citrate transporter VV208B2_36750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VV208B2_36760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VV208B2_36760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VV208B2_36770 PF06029 AlkA N-terminal domain VV208B2_36770 PF00730 HhH-GPD superfamily base excision DNA repair protein VV208B2_36790 PF01609 Transposase DDE domain VV208B2_36790 PF13006 Insertion element 4 transposase N-terminal VV208B2_36800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_36800 PF03466 LysR substrate binding domain VV208B2_36820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VV208B2_36820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VV208B2_36850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VV208B2_36870 PF03616 Sodium/glutamate symporter VV208B2_36880 PF03616 Sodium/glutamate symporter VV208B2_36900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_36900 PF00672 HAMP domain VV208B2_36900 PF17200 Single Cache domain 2 VV208B2_36910 PF04397 LytTr DNA-binding domain VV208B2_36910 PF00072 Response regulator receiver domain VV208B2_36920 PF07694 5TMR of 5TMR-LYT VV208B2_36920 PF06580 Histidine kinase VV208B2_36920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_36950 PF12704 MacB-like periplasmic core domain VV208B2_36950 PF02687 FtsX-like permease family VV208B2_36960 PF00005 ABC transporter VV208B2_36980 PF03466 LysR substrate binding domain VV208B2_36980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_37000 PF01709 Transcriptional regulator VV208B2_37020 PF00672 HAMP domain VV208B2_37020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_37020 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_37020 PF01627 Hpt domain VV208B2_37020 PF17149 Periplasmic sensor domain found in signal transduction proteins VV208B2_37020 PF00072 Response regulator receiver domain VV208B2_37040 PF01609 Transposase DDE domain VV208B2_37040 PF13006 Insertion element 4 transposase N-terminal VV208B2_37050 PF00925 GTP cyclohydrolase II VV208B2_37050 PF08719 Domain of unknown function (DUF1768) VV208B2_37070 PF00005 ABC transporter VV208B2_37070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_37080 PF00005 ABC transporter VV208B2_37080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_37110 PF18607 ParA helix turn helix domain VV208B2_37110 PF13614 AAA domain VV208B2_37120 PF02195 ParB-like nuclease domain VV208B2_37120 PF08775 ParB family VV208B2_37130 PF05127 Helicase VV208B2_37130 PF13718 GNAT acetyltransferase 2 VV208B2_37150 PF00072 Response regulator receiver domain VV208B2_37160 PF01584 CheW-like domain VV208B2_37160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_37160 PF01627 Hpt domain VV208B2_37160 PF02895 Signal transducing histidine kinase, homodimeric domain VV208B2_37160 PF09078 CheY binding VV208B2_37170 PF01584 CheW-like domain VV208B2_37180 PF01584 CheW-like domain VV208B2_37190 PF00672 HAMP domain VV208B2_37190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_37190 PF02203 Tar ligand binding domain homologue VV208B2_37200 PF03705 CheR methyltransferase, all-alpha domain VV208B2_37200 PF01739 CheR methyltransferase, SAM binding domain VV208B2_37210 PF03975 CheD chemotactic sensory transduction VV208B2_37220 PF00072 Response regulator receiver domain VV208B2_37220 PF01339 CheB methylesterase VV208B2_37230 PF00672 HAMP domain VV208B2_37230 PF02203 Tar ligand binding domain homologue VV208B2_37230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_37250 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_37250 PF00072 Response regulator receiver domain VV208B2_37290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_37290 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_37310 PF13411 MerR HTH family regulatory protein VV208B2_37350 PF01039 Carboxyl transferase domain VV208B2_37350 PF17848 Acetyl-coA carboxylase zinc finger domain VV208B2_37370 PF08453 Peptidase family M9 N-terminal VV208B2_37370 PF04151 Bacterial pre-peptidase C-terminal domain VV208B2_37370 PF01752 Collagenase VV208B2_37380 PF00300 Histidine phosphatase superfamily (branch 1) VV208B2_37390 PF00563 EAL domain VV208B2_37390 PF01590 GAF domain VV208B2_37390 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_37390 PF00989 PAS fold VV208B2_37410 PF00367 phosphotransferase system, EIIB VV208B2_37410 PF02378 Phosphotransferase system, EIIC VV208B2_37420 PF13580 SIS domain VV208B2_37430 PF01380 SIS domain VV208B2_37430 PF01418 Helix-turn-helix domain, rpiR family VV208B2_37440 PF01029 NusB family VV208B2_37440 PF01189 16S rRNA methyltransferase RsmB/F VV208B2_37470 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_37470 PF12464 Maltose acetyltransferase VV208B2_37480 PF00166 Chaperonin 10 Kd subunit VV208B2_37490 PF00118 TCP-1/cpn60 chaperonin family VV208B2_37520 PF00005 ABC transporter VV208B2_37520 PF03412 Peptidase C39 family VV208B2_37520 PF00664 ABC transporter transmembrane region VV208B2_37550 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_37560 PF00072 Response regulator receiver domain VV208B2_37560 PF00158 Sigma-54 interaction domain VV208B2_37560 PF02954 Bacterial regulatory protein, Fis family VV208B2_37570 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_37570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_37570 PF02743 Cache domain VV208B2_37580 PF01243 Pyridoxamine 5'-phosphate oxidase VV208B2_37580 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VV208B2_37610 PF12833 Helix-turn-helix domain VV208B2_37620 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VV208B2_37620 PF14850 DNA-binding domain of Proline dehydrogenase VV208B2_37620 PF01619 Proline dehydrogenase VV208B2_37620 PF00171 Aldehyde dehydrogenase family VV208B2_37640 PF00474 Sodium:solute symporter family VV208B2_37670 PF01037 Lrp/AsnC ligand binding domain VV208B2_37690 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VV208B2_37690 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VV208B2_37690 PF02278 Polysaccharide lyase family 8, super-sandwich domain VV208B2_37700 PF16385 Domain of unknown function VV208B2_37700 PF00884 Sulfatase VV208B2_37710 PF00884 Sulfatase VV208B2_37720 PF04055 Radical SAM superfamily VV208B2_37720 PF13186 Iron-sulfur cluster-binding domain VV208B2_37730 PF16347 Domain of unknown function (DUF4976) VV208B2_37750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV208B2_37760 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_37770 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_37770 PF12911 N-terminal TM domain of oligopeptide transport permease C VV208B2_37780 PF00005 ABC transporter VV208B2_37780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_37790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_37790 PF00672 HAMP domain VV208B2_37820 PF01740 STAS domain VV208B2_37820 PF00916 Sulfate permease family VV208B2_37830 PF16363 GDP-mannose 4,6 dehydratase VV208B2_37840 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VV208B2_37840 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VV208B2_37860 PF07470 Glycosyl Hydrolase Family 88 VV208B2_37870 PF17385 Lacto-N-biose phosphorylase central domain VV208B2_37870 PF17386 Lacto-N-biose phosphorylase C-terminal domain VV208B2_37870 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain VV208B2_37880 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VV208B2_37880 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VV208B2_37880 PF02278 Polysaccharide lyase family 8, super-sandwich domain VV208B2_37890 PF00664 ABC transporter transmembrane region VV208B2_37890 PF00005 ABC transporter VV208B2_37920 PF01261 Xylose isomerase-like TIM barrel VV208B2_37930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VV208B2_37950 PF00596 Class II Aldolase and Adducin N-terminal domain VV208B2_37960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_37970 PF03611 PTS system sugar-specific permease component VV208B2_37980 PF00455 DeoR C terminal sensor domain VV208B2_37980 PF08220 DeoR-like helix-turn-helix domain VV208B2_38000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VV208B2_38010 PF04399 Glutaredoxin 2, C terminal domain VV208B2_38010 PF13417 Glutathione S-transferase, N-terminal domain VV208B2_38030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_38030 PF03466 LysR substrate binding domain VV208B2_38040 PF10688 Bacterial inner membrane protein VV208B2_38050 PF01081 KDPG and KHG aldolase VV208B2_38060 PF00294 pfkB family carbohydrate kinase VV208B2_38070 PF02614 Glucuronate isomerase VV208B2_38080 PF01232 Mannitol dehydrogenase Rossmann domain VV208B2_38080 PF08125 Mannitol dehydrogenase C-terminal domain VV208B2_38090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV208B2_38100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VV208B2_38110 PF03480 Bacterial extracellular solute-binding protein, family 7 VV208B2_38120 PF00392 Bacterial regulatory proteins, gntR family VV208B2_38120 PF07729 FCD domain VV208B2_38130 PF03786 D-mannonate dehydratase (UxuA) VV208B2_38140 PF00271 Helicase conserved C-terminal domain VV208B2_38140 PF00270 DEAD/DEAH box helicase VV208B2_38160 PF01966 HD domain VV208B2_38190 PF00005 ABC transporter VV208B2_38200 PF02653 Branched-chain amino acid transport system / permease component VV208B2_38210 PF02653 Branched-chain amino acid transport system / permease component VV208B2_38220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VV208B2_38220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VV208B2_38230 PF03475 3-alpha domain VV208B2_38230 PF03473 MOSC domain VV208B2_38280 PF12833 Helix-turn-helix domain VV208B2_38280 PF12852 Cupin VV208B2_38290 PF00462 Glutaredoxin VV208B2_38320 PF00672 HAMP domain VV208B2_38320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_38360 PF01625 Peptide methionine sulfoxide reductase VV208B2_38370 PF01641 SelR domain VV208B2_38420 PF00753 Metallo-beta-lactamase superfamily VV208B2_38420 PF14864 Alkyl sulfatase C-terminal VV208B2_38420 PF14863 Alkyl sulfatase dimerisation VV208B2_38430 PF03466 LysR substrate binding domain VV208B2_38430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_38440 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VV208B2_38440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV208B2_38460 PF12833 Helix-turn-helix domain VV208B2_38470 PF00892 EamA-like transporter family VV208B2_38480 PF00455 DeoR C terminal sensor domain VV208B2_38480 PF08220 DeoR-like helix-turn-helix domain VV208B2_38490 PF00455 DeoR C terminal sensor domain VV208B2_38490 PF08220 DeoR-like helix-turn-helix domain VV208B2_38500 PF08013 Tagatose 6 phosphate kinase VV208B2_38510 PF01380 SIS domain VV208B2_38520 PF03830 PTS system sorbose subfamily IIB component VV208B2_38530 PF03609 PTS system sorbose-specific iic component VV208B2_38540 PF03613 PTS system mannose/fructose/sorbose family IID component VV208B2_38550 PF03610 PTS system fructose IIA component VV208B2_38560 PF01979 Amidohydrolase family VV208B2_38570 PF01116 Fructose-bisphosphate aldolase class-II VV208B2_38580 PF07715 TonB-dependent Receptor Plug Domain VV208B2_38580 PF00593 TonB dependent receptor VV208B2_38600 PF01032 FecCD transport family VV208B2_38610 PF01497 Periplasmic binding protein VV208B2_38620 PF00005 ABC transporter VV208B2_38670 PF02687 FtsX-like permease family VV208B2_38670 PF12704 MacB-like periplasmic core domain VV208B2_38670 PF00005 ABC transporter VV208B2_38680 PF00005 ABC transporter VV208B2_38680 PF02687 FtsX-like permease family VV208B2_38680 PF12704 MacB-like periplasmic core domain VV208B2_38690 PF00005 ABC transporter VV208B2_38690 PF02687 FtsX-like permease family VV208B2_38690 PF12704 MacB-like periplasmic core domain VV208B2_38700 PF00929 Exonuclease VV208B2_38700 PF02811 PHP domain VV208B2_38700 PF14579 Helix-hairpin-helix motif VV208B2_38700 PF11490 DNA polymerase III polC-type N-terminus II VV208B2_38700 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV208B2_38700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV208B2_38730 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_38730 PF17158 Membrane-associated sensor, integral membrane domain VV208B2_38760 PF08267 Cobalamin-independent synthase, N-terminal domain VV208B2_38760 PF01717 Cobalamin-independent synthase, Catalytic domain VV208B2_38790 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_38790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_38800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_38800 PF03466 LysR substrate binding domain VV208B2_38810 PF00672 HAMP domain VV208B2_38810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_38810 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_38820 PF00072 Response regulator receiver domain VV208B2_38820 PF00486 Transcriptional regulatory protein, C terminal VV208B2_38850 PF14864 Alkyl sulfatase C-terminal VV208B2_38850 PF00753 Metallo-beta-lactamase superfamily VV208B2_38850 PF14863 Alkyl sulfatase dimerisation VV208B2_38870 PF02743 Cache domain VV208B2_38870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_38870 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_38880 PF00158 Sigma-54 interaction domain VV208B2_38880 PF02954 Bacterial regulatory protein, Fis family VV208B2_38880 PF00072 Response regulator receiver domain VV208B2_38910 PF01266 FAD dependent oxidoreductase VV208B2_38930 PF00072 Response regulator receiver domain VV208B2_38940 PF00072 Response regulator receiver domain VV208B2_38940 PF00672 HAMP domain VV208B2_38940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_38940 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_38940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_38940 PF01627 Hpt domain VV208B2_38950 PF12729 Four helix bundle sensory module for signal transduction VV208B2_38950 PF00672 HAMP domain VV208B2_38950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_38970 PF13599 Pentapeptide repeats (9 copies) VV208B2_38990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV208B2_38990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV208B2_39000 PF07504 Fungalysin/Thermolysin Propeptide Motif VV208B2_39000 PF03413 Peptidase propeptide and YPEB domain VV208B2_39000 PF01447 Thermolysin metallopeptidase, catalytic domain VV208B2_39000 PF02868 Thermolysin metallopeptidase, alpha-helical domain VV208B2_39000 PF04151 Bacterial pre-peptidase C-terminal domain VV208B2_39060 PF00270 DEAD/DEAH box helicase VV208B2_39060 PF00271 Helicase conserved C-terminal domain VV208B2_39070 PF00561 alpha/beta hydrolase fold VV208B2_39080 PF00881 Nitroreductase family VV208B2_39100 PF03466 LysR substrate binding domain VV208B2_39100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_39120 PF00970 Oxidoreductase FAD-binding domain VV208B2_39120 PF00175 Oxidoreductase NAD-binding domain VV208B2_39130 PF00892 EamA-like transporter family VV208B2_39140 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV208B2_39180 PF07690 Major Facilitator Superfamily VV208B2_39190 PF02311 AraC-like ligand binding domain VV208B2_39190 PF12833 Helix-turn-helix domain VV208B2_39220 PF03466 LysR substrate binding domain VV208B2_39220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_39230 PF07519 Tannase and feruloyl esterase VV208B2_39250 PF06942 GlpM protein VV208B2_39260 PF03150 Di-haem cytochrome c peroxidase VV208B2_39260 PF00034 Cytochrome c VV208B2_39280 PF02001 Protein of unknown function DUF134 VV208B2_39310 PF00679 Elongation factor G C-terminus VV208B2_39310 PF00009 Elongation factor Tu GTP binding domain VV208B2_39310 PF03144 Elongation factor Tu domain 2 VV208B2_39310 PF14492 Elongation Factor G, domain II VV208B2_39310 PF03764 Elongation factor G, domain IV VV208B2_39320 PF00583 Acetyltransferase (GNAT) family VV208B2_39330 PF17151 Periplasmic sensor domain VV208B2_39330 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_39360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_39360 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_39360 PF00672 HAMP domain VV208B2_39370 PF00072 Response regulator receiver domain VV208B2_39370 PF00486 Transcriptional regulatory protein, C terminal VV208B2_39380 PF02378 Phosphotransferase system, EIIC VV208B2_39380 PF00367 phosphotransferase system, EIIB VV208B2_39400 PF00376 MerR family regulatory protein VV208B2_39400 PF09278 MerR, DNA binding VV208B2_39410 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VV208B2_39420 PF12833 Helix-turn-helix domain VV208B2_39430 PF01161 Phosphatidylethanolamine-binding protein VV208B2_39440 PF00293 NUDIX domain VV208B2_39450 PF00672 HAMP domain VV208B2_39450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_39450 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_39450 PF01627 Hpt domain VV208B2_39450 PF00072 Response regulator receiver domain VV208B2_39450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_39470 PF13533 Biotin-lipoyl like VV208B2_39480 PF00873 AcrB/AcrD/AcrF family VV208B2_39500 PF00924 Mechanosensitive ion channel VV208B2_39540 PF00583 Acetyltransferase (GNAT) family VV208B2_39540 PF00795 Carbon-nitrogen hydrolase VV208B2_39590 PF09339 IclR helix-turn-helix domain VV208B2_39590 PF01614 Bacterial transcriptional regulator VV208B2_39610 PF10688 Bacterial inner membrane protein VV208B2_39620 PF07883 Cupin domain VV208B2_39650 PF00271 Helicase conserved C-terminal domain VV208B2_39680 PF00892 EamA-like transporter family VV208B2_39690 PF00294 pfkB family carbohydrate kinase VV208B2_39700 PF01081 KDPG and KHG aldolase VV208B2_39720 PF06917 Periplasmic pectate lyase VV208B2_39730 PF00474 Sodium:solute symporter family VV208B2_39750 PF13229 Right handed beta helix region VV208B2_39760 PF00474 Sodium:solute symporter family VV208B2_39770 PF14583 Oligogalacturonate lyase VV208B2_39780 PF00128 Alpha amylase, catalytic domain VV208B2_39800 PF07670 Nucleoside recognition VV208B2_39810 PF07670 Nucleoside recognition VV208B2_39820 PF07687 Peptidase dimerisation domain VV208B2_39820 PF01546 Peptidase family M20/M25/M40 VV208B2_39850 PF03466 LysR substrate binding domain VV208B2_39850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_39890 PF01022 Bacterial regulatory protein, arsR family VV208B2_39900 PF01758 Sodium Bile acid symporter family VV208B2_39940 PF08019 Phosphoethanolamine transferase EptA/EptB VV208B2_39940 PF00884 Sulfatase VV208B2_39980 PF00529 HlyD membrane-fusion protein of T1SS VV208B2_39980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_40000 PF07687 Peptidase dimerisation domain VV208B2_40000 PF01546 Peptidase family M20/M25/M40 VV208B2_40020 PF08543 Phosphomethylpyrimidine kinase VV208B2_40030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_40030 PF03466 LysR substrate binding domain VV208B2_40050 PF03466 LysR substrate binding domain VV208B2_40050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_40070 PF14864 Alkyl sulfatase C-terminal VV208B2_40070 PF14863 Alkyl sulfatase dimerisation VV208B2_40070 PF00753 Metallo-beta-lactamase superfamily VV208B2_40090 PF13533 Biotin-lipoyl like VV208B2_40110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV208B2_40120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VV208B2_40120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VV208B2_40130 PF00579 tRNA synthetases class I (W and Y) VV208B2_40130 PF01479 S4 domain VV208B2_40140 PF00072 Response regulator receiver domain VV208B2_40140 PF00196 Bacterial regulatory proteins, luxR family VV208B2_40150 PF02567 Phenazine biosynthesis-like protein VV208B2_40160 PF03466 LysR substrate binding domain VV208B2_40160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_40170 PF14497 Glutathione S-transferase, C-terminal domain VV208B2_40170 PF02798 Glutathione S-transferase, N-terminal domain VV208B2_40180 PF13407 Periplasmic binding protein domain VV208B2_40190 PF00563 EAL domain VV208B2_40190 PF03707 Bacterial signalling protein N terminal repeat VV208B2_40190 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_40200 PF00158 Sigma-54 interaction domain VV208B2_40200 PF02954 Bacterial regulatory protein, Fis family VV208B2_40200 PF01590 GAF domain VV208B2_40210 PF00171 Aldehyde dehydrogenase family VV208B2_40230 PF03471 Transporter associated domain VV208B2_40230 PF00571 CBS domain VV208B2_40230 PF01595 Cyclin M transmembrane N-terminal domain VV208B2_40240 PF12561 ToxR activated gene A lipoprotein domain VV208B2_40240 PF00041 Fibronectin type III domain VV208B2_40250 PF01327 Polypeptide deformylase VV208B2_40260 PF03611 PTS system sugar-specific permease component VV208B2_40280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV208B2_40290 PF00356 Bacterial regulatory proteins, lacI family VV208B2_40300 PF00111 2Fe-2S iron-sulfur cluster binding domain VV208B2_40300 PF00970 Oxidoreductase FAD-binding domain VV208B2_40300 PF00175 Oxidoreductase NAD-binding domain VV208B2_40330 PF00005 ABC transporter VV208B2_40330 PF16326 ABC transporter C-terminal domain VV208B2_40330 PF12848 ABC transporter VV208B2_40340 PF03222 Tryptophan/tyrosine permease family VV208B2_40360 PF01212 Beta-eliminating lyase VV208B2_40380 PF00873 AcrB/AcrD/AcrF family VV208B2_40390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV208B2_40420 PF00753 Metallo-beta-lactamase superfamily VV208B2_40430 PF08443 RimK-like ATP-grasp domain VV208B2_40430 PF18030 RimK PreATP-grasp domain VV208B2_40440 PF18030 RimK PreATP-grasp domain VV208B2_40440 PF08443 RimK-like ATP-grasp domain VV208B2_40450 PF00975 Thioesterase domain VV208B2_40450 PF00550 Phosphopantetheine attachment site VV208B2_40450 PF00668 Condensation domain VV208B2_40450 PF13193 AMP-binding enzyme C-terminal domain VV208B2_40450 PF00501 AMP-binding enzyme VV208B2_40460 PF07715 TonB-dependent Receptor Plug Domain VV208B2_40470 PF01497 Periplasmic binding protein VV208B2_40490 PF00501 AMP-binding enzyme VV208B2_40490 PF13193 AMP-binding enzyme C-terminal domain VV208B2_40510 PF00857 Isochorismatase family VV208B2_40510 PF00550 Phosphopantetheine attachment site VV208B2_40520 PF04954 Siderophore-interacting protein VV208B2_40520 PF08021 Siderophore-interacting FAD-binding domain VV208B2_40530 PF00501 AMP-binding enzyme VV208B2_40530 PF13193 AMP-binding enzyme C-terminal domain VV208B2_40540 PF00425 chorismate binding enzyme VV208B2_40560 PF00793 DAHP synthetase I family VV208B2_40570 PF00501 AMP-binding enzyme VV208B2_40570 PF13193 AMP-binding enzyme C-terminal domain VV208B2_40570 PF00668 Condensation domain VV208B2_40570 PF00550 Phosphopantetheine attachment site VV208B2_40570 PF00975 Thioesterase domain VV208B2_40580 PF07993 Male sterility protein VV208B2_40580 PF00668 Condensation domain VV208B2_40580 PF00550 Phosphopantetheine attachment site VV208B2_40580 PF00501 AMP-binding enzyme VV208B2_40580 PF13193 AMP-binding enzyme C-terminal domain VV208B2_40590 PF01648 4'-phosphopantetheinyl transferase superfamily VV208B2_40590 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VV208B2_40620 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_40630 PF12729 Four helix bundle sensory module for signal transduction VV208B2_40630 PF00672 HAMP domain VV208B2_40630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_40650 PF17996 Carbohydrate esterase 2 N-terminal VV208B2_40650 PF13472 GDSL-like Lipase/Acylhydrolase family VV208B2_40660 PF00563 EAL domain VV208B2_40660 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_40660 PF08448 PAS fold VV208B2_40690 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_40700 PF00528 Binding-protein-dependent transport system inner membrane component VV208B2_40710 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_40720 PF00005 ABC transporter VV208B2_40730 PF04170 NlpE N-terminal domain VV208B2_40730 PF17185 NlpE C-terminal OB domain VV208B2_40760 PF02378 Phosphotransferase system, EIIC VV208B2_40810 PF07690 Major Facilitator Superfamily VV208B2_40850 PF02589 LUD domain VV208B2_40860 PF02589 LUD domain VV208B2_40860 PF13183 4Fe-4S dicluster domain VV208B2_40860 PF11870 Domain of unknown function (DUF3390) VV208B2_40870 PF02754 Cysteine-rich domain VV208B2_40880 PF02652 L-lactate permease VV208B2_40890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_40890 PF03466 LysR substrate binding domain VV208B2_40900 PF00326 Prolyl oligopeptidase family VV208B2_40900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VV208B2_40910 PF00005 ABC transporter VV208B2_40910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV208B2_40930 PF05362 Lon protease (S16) C-terminal proteolytic domain VV208B2_40930 PF13654 AAA domain VV208B2_40940 PF07969 Amidohydrolase family VV208B2_40950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VV208B2_40960 PF12833 Helix-turn-helix domain VV208B2_40970 PF00571 CBS domain VV208B2_40970 PF03448 MgtE intracellular N domain VV208B2_40970 PF01769 Divalent cation transporter VV208B2_41020 PF00072 Response regulator receiver domain VV208B2_41020 PF00486 Transcriptional regulatory protein, C terminal VV208B2_41030 PF00672 HAMP domain VV208B2_41030 PF16527 Two-component sensor protein CpxA, periplasmic domain VV208B2_41030 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_41030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_41050 PF00155 Aminotransferase class I and II VV208B2_41050 PF00392 Bacterial regulatory proteins, gntR family VV208B2_41060 PF13230 Glutamine amidotransferases class-II VV208B2_41070 PF13520 Amino acid permease VV208B2_41080 PF01037 Lrp/AsnC ligand binding domain VV208B2_41090 PF03466 LysR substrate binding domain VV208B2_41090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_41110 PF00462 Glutaredoxin VV208B2_41110 PF08534 Redoxin VV208B2_41120 PF00709 Adenylosuccinate synthetase VV208B2_41130 PF03466 LysR substrate binding domain VV208B2_41130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_41150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV208B2_41150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV208B2_41180 PF00672 HAMP domain VV208B2_41180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_41180 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_41180 PF01627 Hpt domain VV208B2_41180 PF00072 Response regulator receiver domain VV208B2_41180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV208B2_41190 PF01554 MatE VV208B2_41200 PF04363 Protein of unknown function (DUF496) VV208B2_41220 PF04337 Protein of unknown function, DUF480 VV208B2_41230 PF01541 GIY-YIG catalytic domain VV208B2_41250 PF13407 Periplasmic binding protein domain VV208B2_41270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_41270 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_41270 PF09308 LuxQ, periplasmic VV208B2_41270 PF00072 Response regulator receiver domain VV208B2_41300 PF01037 Lrp/AsnC ligand binding domain VV208B2_41350 PF02355 Protein export membrane protein VV208B2_41350 PF07549 SecD/SecF GG Motif VV208B2_41350 PF13721 SecD export protein N-terminal TM region VV208B2_41360 PF07549 SecD/SecF GG Motif VV208B2_41360 PF02355 Protein export membrane protein VV208B2_41370 PF00106 short chain dehydrogenase VV208B2_41380 PF02803 Thiolase, C-terminal domain VV208B2_41380 PF00108 Thiolase, N-terminal domain VV208B2_41400 PF00561 alpha/beta hydrolase fold VV208B2_41400 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VV208B2_41420 PF01979 Amidohydrolase family VV208B2_41430 PF00480 ROK family VV208B2_41440 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VV208B2_41450 PF03480 Bacterial extracellular solute-binding protein, family 7 VV208B2_41460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VV208B2_41470 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV208B2_41480 PF00701 Dihydrodipicolinate synthetase family VV208B2_41490 PF01418 Helix-turn-helix domain, rpiR family VV208B2_41490 PF01380 SIS domain VV208B2_41500 PF01344 Kelch motif VV208B2_41510 PF07646 Kelch motif VV208B2_41530 PF03264 NapC/NirT cytochrome c family, N-terminal region VV208B2_41540 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VV208B2_41550 PF00384 Molybdopterin oxidoreductase VV208B2_41550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV208B2_41550 PF01568 Molydopterin dinucleotide binding domain VV208B2_41570 PF00672 HAMP domain VV208B2_41570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_41570 PF07730 Histidine kinase VV208B2_41570 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VV208B2_41580 PF00196 Bacterial regulatory proteins, luxR family VV208B2_41580 PF00072 Response regulator receiver domain VV208B2_41620 PF01256 Carbohydrate kinase VV208B2_41620 PF03853 YjeF-related protein N-terminus VV208B2_41640 PF00478 IMP dehydrogenase / GMP reductase domain VV208B2_41670 PF00145 C-5 cytosine-specific DNA methylase VV208B2_41710 PF00478 IMP dehydrogenase / GMP reductase domain VV208B2_41740 PF01272 Transcription elongation factor, GreA/GreB, C-term VV208B2_41740 PF14760 Rnk N-terminus VV208B2_41750 PF00583 Acetyltransferase (GNAT) family VV208B2_41770 PF03372 Endonuclease/Exonuclease/phosphatase family VV208B2_41800 PF00132 Bacterial transferase hexapeptide (six repeats) VV208B2_41820 PF00270 DEAD/DEAH box helicase VV208B2_41820 PF00271 Helicase conserved C-terminal domain VV208B2_41840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV208B2_41850 PF01047 MarR family VV208B2_41870 PF12706 Beta-lactamase superfamily domain VV208B2_41890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VV208B2_41910 PF00005 ABC transporter VV208B2_41930 PF01418 Helix-turn-helix domain, rpiR family VV208B2_41930 PF02685 Glucokinase VV208B2_41930 PF01380 SIS domain VV208B2_41950 PF07969 Amidohydrolase family VV208B2_41970 PF00474 Sodium:solute symporter family VV208B2_41980 PF00728 Glycosyl hydrolase family 20, catalytic domain VV208B2_41980 PF02838 Glycosyl hydrolase family 20, domain 2 VV208B2_42000 PF01042 Endoribonuclease L-PSP VV208B2_42010 PF01590 GAF domain VV208B2_42010 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_42010 PF00360 Phytochrome region VV208B2_42010 PF00563 EAL domain VV208B2_42020 PF03466 LysR substrate binding domain VV208B2_42020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_42030 PF07690 Major Facilitator Superfamily VV208B2_42060 PF00462 Glutaredoxin VV208B2_42070 PF00892 EamA-like transporter family VV208B2_42080 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_42080 PF00563 EAL domain VV208B2_42080 PF03707 Bacterial signalling protein N terminal repeat VV208B2_42110 PF00578 AhpC/TSA family VV208B2_42130 PF02566 OsmC-like protein VV208B2_42140 PF01047 MarR family VV208B2_42150 PF01557 Fumarylacetoacetate (FAA) hydrolase family VV208B2_42190 PF01810 LysE type translocator VV208B2_42210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV208B2_42210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV208B2_42210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV208B2_42210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV208B2_42220 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VV208B2_42220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VV208B2_42230 PF00115 Cytochrome C and Quinol oxidase polypeptide I VV208B2_42240 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VV208B2_42250 PF00510 Cytochrome c oxidase subunit III VV208B2_42280 PF02628 Cytochrome oxidase assembly protein VV208B2_42290 PF01040 UbiA prenyltransferase family VV208B2_42300 PF13488 Glycine zipper VV208B2_42300 PF00691 OmpA family VV208B2_42310 PF00793 DAHP synthetase I family VV208B2_42320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_42320 PF08447 PAS fold VV208B2_42330 PF00563 EAL domain VV208B2_42330 PF03707 Bacterial signalling protein N terminal repeat VV208B2_42330 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_42350 PF02779 Transketolase, pyrimidine binding domain VV208B2_42350 PF00456 Transketolase, thiamine diphosphate binding domain VV208B2_42350 PF02780 Transketolase, C-terminal domain VV208B2_42360 PF00923 Transaldolase/Fructose-6-phosphate aldolase VV208B2_42380 PF00704 Glycosyl hydrolases family 18 VV208B2_42380 PF08329 Chitinase A, N-terminal domain VV208B2_42390 PF03707 Bacterial signalling protein N terminal repeat VV208B2_42390 PF00563 EAL domain VV208B2_42390 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_42400 PF00581 Rhodanese-like domain VV208B2_42410 PF00899 ThiF family VV208B2_42420 PF00994 Probable molybdopterin binding domain VV208B2_42420 PF03454 MoeA C-terminal region (domain IV) VV208B2_42420 PF03453 MoeA N-terminal region (domain I and II) VV208B2_42430 PF01227 GTP cyclohydrolase I VV208B2_42440 PF01566 Natural resistance-associated macrophage protein VV208B2_42460 PF00654 Voltage gated chloride channel VV208B2_42510 PF00248 Aldo/keto reductase family VV208B2_42530 PF07687 Peptidase dimerisation domain VV208B2_42530 PF01546 Peptidase family M20/M25/M40 VV208B2_42540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV208B2_42550 PF13533 Biotin-lipoyl like VV208B2_42560 PF00873 AcrB/AcrD/AcrF family VV208B2_42570 PF12729 Four helix bundle sensory module for signal transduction VV208B2_42570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_42570 PF00672 HAMP domain VV208B2_42580 PF13419 Haloacid dehalogenase-like hydrolase VV208B2_42590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV208B2_42590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV208B2_42660 PF00313 'Cold-shock' DNA-binding domain VV208B2_42670 PF03889 Alternative ribosome-rescue factor A VV208B2_42690 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_42700 PF01238 Phosphomannose isomerase type I VV208B2_42710 PF07690 Major Facilitator Superfamily VV208B2_42720 PF05231 MASE1 VV208B2_42720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_42720 PF07730 Histidine kinase VV208B2_42730 PF00196 Bacterial regulatory proteins, luxR family VV208B2_42730 PF00072 Response regulator receiver domain VV208B2_42740 PF07690 Major Facilitator Superfamily VV208B2_42770 PF00107 Zinc-binding dehydrogenase VV208B2_42770 PF16884 N-terminal domain of oxidoreductase VV208B2_42780 PF16925 Tetracyclin repressor-like, C-terminal domain VV208B2_42780 PF00440 Bacterial regulatory proteins, tetR family VV208B2_42790 PF01699 Sodium/calcium exchanger protein VV208B2_42820 PF00313 'Cold-shock' DNA-binding domain VV208B2_42830 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV208B2_42830 PF13192 Thioredoxin domain VV208B2_42840 PF10417 C-terminal domain of 1-Cys peroxiredoxin VV208B2_42840 PF00578 AhpC/TSA family VV208B2_42850 PF00682 HMGL-like VV208B2_42860 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_42870 PF01039 Carboxyl transferase domain VV208B2_42880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV208B2_42880 PF02770 Acyl-CoA dehydrogenase, middle domain VV208B2_42880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV208B2_42890 PF09278 MerR, DNA binding VV208B2_42890 PF00376 MerR family regulatory protein VV208B2_42900 PF02803 Thiolase, C-terminal domain VV208B2_42900 PF00108 Thiolase, N-terminal domain VV208B2_42910 PF00171 Aldehyde dehydrogenase family VV208B2_42920 PF02770 Acyl-CoA dehydrogenase, middle domain VV208B2_42920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV208B2_42920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV208B2_42930 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_42940 PF00378 Enoyl-CoA hydratase/isomerase VV208B2_42950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VV208B2_42950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV208B2_42970 PF00664 ABC transporter transmembrane region VV208B2_42970 PF00005 ABC transporter VV208B2_42970 PF03412 Peptidase C39 family VV208B2_42990 PF00005 ABC transporter VV208B2_42990 PF03412 Peptidase C39 family VV208B2_42990 PF00664 ABC transporter transmembrane region VV208B2_43010 PF02794 RTX toxin acyltransferase family VV208B2_43020 PF11647 Membrane Localization Domain VV208B2_43020 PF11713 Peptidase C80 family VV208B2_43020 PF07634 RtxA repeat VV208B2_43020 PF12146 Serine aminopeptidase, S33 VV208B2_43020 PF16671 Actin cross-linking domain VV208B2_43030 PF00842 Alanine racemase, C-terminal domain VV208B2_43030 PF01168 Alanine racemase, N-terminal domain VV208B2_43040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_43040 PF00672 HAMP domain VV208B2_43060 PF01012 Electron transfer flavoprotein domain VV208B2_43070 PF01012 Electron transfer flavoprotein domain VV208B2_43070 PF00766 Electron transfer flavoprotein FAD-binding domain VV208B2_43080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV208B2_43080 PF00364 Biotin-requiring enzyme VV208B2_43080 PF02817 e3 binding domain VV208B2_43090 PF02779 Transketolase, pyrimidine binding domain VV208B2_43090 PF02780 Transketolase, C-terminal domain VV208B2_43100 PF00676 Dehydrogenase E1 component VV208B2_43110 PF00962 Adenosine/AMP deaminase VV208B2_43130 PF11849 Domain of unknown function (DUF3369) VV208B2_43140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV208B2_43140 PF00512 His Kinase A (phospho-acceptor) domain VV208B2_43140 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV208B2_43180 PF00892 EamA-like transporter family VV208B2_43200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_43200 PF03466 LysR substrate binding domain VV208B2_43220 PF00501 AMP-binding enzyme VV208B2_43220 PF13193 AMP-binding enzyme C-terminal domain VV208B2_43230 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VV208B2_43240 PF01329 Pterin 4 alpha carbinolamine dehydratase VV208B2_43250 PF03707 Bacterial signalling protein N terminal repeat VV208B2_43250 PF00563 EAL domain VV208B2_43250 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_43280 PF12843 Putative quorum-sensing-regulated virulence factor VV208B2_43320 PF00069 Protein kinase domain VV208B2_43320 PF03793 PASTA domain VV208B2_43350 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VV208B2_43360 PF13677 Membrane MotB of proton-channel complex MotA/MotB VV208B2_43360 PF00691 OmpA family VV208B2_43370 PF06761 Intracellular multiplication and human macrophage-killing VV208B2_43370 PF14331 ImcF-related N-terminal domain VV208B2_43370 PF06744 Type VI secretion protein IcmF C-terminal VV208B2_43410 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 VV208B2_43420 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV208B2_43430 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV208B2_43440 PF07024 ImpE protein VV208B2_43460 PF05947 Type VI secretion system, TssF VV208B2_43480 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_43480 PF10431 C-terminal, D2-small domain, of ClpB protein VV208B2_43480 PF07724 AAA domain (Cdc48 subfamily) VV208B2_43480 PF17871 AAA lid domain VV208B2_43500 PF06715 Gp5 C-terminal repeat (3 copies) VV208B2_43500 PF04717 Type VI secretion system, phage-baseplate injector VV208B2_43530 PF03527 RHS protein VV208B2_43530 PF05593 RHS Repeat VV208B2_43550 PF03527 RHS protein VV208B2_43630 PF00216 Bacterial DNA-binding protein VV208B2_43680 PF00004 ATPase family associated with various cellular activities (AAA) VV208B2_43680 PF17862 AAA+ lid domain VV208B2_43680 PF01434 Peptidase family M41 VV208B2_43700 PF02810 SEC-C motif VV208B2_43700 PF01043 SecA preprotein cross-linking domain VV208B2_43700 PF07516 SecA Wing and Scaffold domain VV208B2_43700 PF07517 SecA DEAD-like domain VV208B2_43710 PF01467 Cytidylyltransferase-like VV208B2_43720 PF00216 Bacterial DNA-binding protein VV208B2_44050 PF00929 Exonuclease VV208B2_44200 PF00580 UvrD/REP helicase N-terminal domain VV208B2_44200 PF13361 UvrD-like helicase C-terminal domain VV208B2_44220 PF12728 Helix-turn-helix domain VV208B2_44220 PF02661 Fic/DOC family VV208B2_44230 PF06986 Type-1V conjugative transfer system mating pair stabilisation VV208B2_44290 PF00216 Bacterial DNA-binding protein VV208B2_44300 PF01258 Prokaryotic dksA/traR C4-type zinc finger VV208B2_44510 PF17762 HTH domain found in ParB protein VV208B2_44510 PF02195 ParB-like nuclease domain VV208B2_44670 PF10502 Signal peptidase, peptidase S26 VV208B2_44700 PF00533 BRCA1 C Terminus (BRCT) domain VV208B2_44700 PF01653 NAD-dependent DNA ligase adenylation domain VV208B2_44700 PF03120 NAD-dependent DNA ligase OB-fold domain VV208B2_44850 PF00795 Carbon-nitrogen hydrolase VV208B2_44970 PF07715 TonB-dependent Receptor Plug Domain VV208B2_44970 PF00593 TonB dependent receptor VV208B2_44980 PF01051 Initiator Replication protein VV208B2_45000 PF02768 DNA polymerase III beta subunit, C-terminal domain VV208B2_45000 PF00712 DNA polymerase III beta subunit, N-terminal domain VV208B2_45000 PF02767 DNA polymerase III beta subunit, central domain VV208B2_45080 PF13361 UvrD-like helicase C-terminal domain VV208B2_45080 PF00580 UvrD/REP helicase N-terminal domain VV208B2_45090 PF00145 C-5 cytosine-specific DNA methylase VV208B2_45190 PF06733 DEAD_2 VV208B2_45190 PF13307 Helicase C-terminal domain VV208B2_45330 PF13333 Integrase core domain VV208B2_45330 PF00665 Integrase core domain VV208B2_45330 PF13276 HTH-like domain VV208B2_45570 PF13098 Thioredoxin-like domain VV208B2_45570 PF10411 Disulfide bond isomerase protein N-terminus VV208B2_45650 PF06965 Na+/H+ antiporter 1 VV208B2_45650 PF01343 Peptidase family S49 VV208B2_45960 PF08774 VRR-NUC domain VV208B2_45960 PF04851 Type III restriction enzyme, res subunit VV208B2_45970 PF18273 Type III R-M EcoP15I C-terminal domain VV208B2_45970 PF01555 DNA methylase VV208B2_46050 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_46050 PF01590 GAF domain VV208B2_46050 PF00563 EAL domain VV208B2_46050 PF00360 Phytochrome region VV208B2_46060 PF02743 Cache domain VV208B2_46060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_46060 PF00672 HAMP domain VV208B2_46070 PF08447 PAS fold VV208B2_46070 PF13426 PAS domain VV208B2_46070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_46190 PF00816 H-NS histone family VV208B2_46250 PF13276 HTH-like domain VV208B2_46250 PF00665 Integrase core domain VV208B2_46250 PF13333 Integrase core domain VV208B2_46260 PF01527 Transposase VV208B2_46300 PF12792 CSS motif domain associated with EAL VV208B2_46300 PF00563 EAL domain VV208B2_46460 PF02086 D12 class N6 adenine-specific DNA methyltransferase VV208B2_46540 PF03738 Glutathionylspermidine synthase preATP-grasp VV208B2_46560 PF00154 recA bacterial DNA recombination protein VV208B2_46590 PF00589 Phage integrase family VV208B2_46600 PF00717 Peptidase S24-like VV208B2_46610 PF11799 impB/mucB/samB family C-terminal domain VV208B2_46610 PF00817 impB/mucB/samB family VV208B2_46610 PF13438 Domain of unknown function (DUF4113) VV208B2_46620 PF00239 Resolvase, N terminal domain VV208B2_46620 PF02796 Helix-turn-helix domain of resolvase VV208B2_46640 PF01381 Helix-turn-helix VV208B2_46650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_46650 PF00672 HAMP domain VV208B2_46650 PF12729 Four helix bundle sensory module for signal transduction VV208B2_46670 PF13276 HTH-like domain VV208B2_46670 PF00665 Integrase core domain VV208B2_46670 PF13333 Integrase core domain VV208B2_46740 PF00072 Response regulator receiver domain VV208B2_46740 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_46750 PF08220 DeoR-like helix-turn-helix domain VV208B2_46750 PF00455 DeoR C terminal sensor domain VV208B2_46770 PF14602 Hexapeptide repeat of succinyl-transferase VV208B2_46770 PF12464 Maltose acetyltransferase VV208B2_46780 PF00156 Phosphoribosyl transferase domain VV208B2_46820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV208B2_46820 PF03466 LysR substrate binding domain VV208B2_46830 PF00892 EamA-like transporter family VV208B2_46850 PF00672 HAMP domain VV208B2_46850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_46850 PF12729 Four helix bundle sensory module for signal transduction VV208B2_46870 PF01527 Transposase VV208B2_46880 PF13276 HTH-like domain VV208B2_46880 PF00665 Integrase core domain VV208B2_46880 PF13333 Integrase core domain VV208B2_46890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV208B2_46890 PF12729 Four helix bundle sensory module for signal transduction VV208B2_46890 PF00672 HAMP domain VV208B2_46900 PF00989 PAS fold VV208B2_46910 PF03707 Bacterial signalling protein N terminal repeat VV208B2_46910 PF00563 EAL domain VV208B2_46910 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_46920 PF00360 Phytochrome region VV208B2_46920 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_46920 PF01590 GAF domain VV208B2_46920 PF00563 EAL domain VV208B2_46930 PF03707 Bacterial signalling protein N terminal repeat VV208B2_46930 PF00990 Diguanylate cyclase, GGDEF domain VV208B2_46930 PF00563 EAL domain VV208B2_46940 PF13700 Domain of unknown function (DUF4158) VV208B2_46940 PF01526 Tn3 transposase DDE domain VV208B2_46950 PF13700 Domain of unknown function (DUF4158) VV208B2_46950 PF01526 Tn3 transposase DDE domain VV208B2_46980 PF01292 Prokaryotic cytochrome b561 VV208B2_46990 PF04264 YceI-like domain VV208B2_47090 PF13006 Insertion element 4 transposase N-terminal VV208B2_47090 PF01609 Transposase DDE domain