locus-tag class description F6X00_00020 PF02769 AIR synthase related protein, C-terminal domain F6X00_00020 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F6X00_00020 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F6X00_00025 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_00025 PF01464 Transglycosylase SLT domain F6X00_00035 PF14437 MafB19-like deaminase F6X00_00040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_00040 PF03466 LysR substrate binding domain F6X00_00045 PF00107 Zinc-binding dehydrogenase F6X00_00045 PF08240 Alcohol dehydrogenase GroES-like domain F6X00_00050 PF00756 Putative esterase F6X00_00055 PF03806 AbgT putative transporter family F6X00_00080 PF00114 Pilin (bacterial filament) F6X00_00080 PF07963 Prokaryotic N-terminal methylation motif F6X00_00085 PF00226 DnaJ domain F6X00_00085 PF01556 DnaJ C terminal domain F6X00_00085 PF00684 DnaJ central domain F6X00_00090 PF00012 Hsp70 protein F6X00_00115 PF00375 Sodium:dicarboxylate symporter family F6X00_00120 PF01025 GrpE F6X00_00125 PF01513 ATP-NAD kinase F6X00_00130 PF02463 RecF/RecN/SMC N terminal domain F6X00_00135 PF04355 SmpA / OmlA family F6X00_00140 PF03658 RnfH family Ubiquitin F6X00_00145 PF03364 Polyketide cyclase / dehydrase and lipid transport F6X00_00150 PF01668 SmpB protein F6X00_00160 PF00589 Phage integrase family F6X00_00160 PF13356 Arm DNA-binding domain F6X00_00175 PF12161 HsdM N-terminal domain F6X00_00175 PF02384 N-6 DNA Methylase F6X00_00180 PF01420 Type I restriction modification DNA specificity domain F6X00_00185 PF11867 Domain of unknown function (DUF3387) F6X00_00185 PF18766 SWI2/SNF2 ATPase F6X00_00185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F6X00_00200 PF02796 Helix-turn-helix domain of resolvase F6X00_00200 PF00239 Resolvase, N terminal domain F6X00_00280 PF01300 Telomere recombination F6X00_00280 PF03481 Putative GTP-binding controlling metal-binding F6X00_00290 PF02028 BCCT, betaine/carnitine/choline family transporter F6X00_00295 PF07885 Ion channel F6X00_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_00300 PF03466 LysR substrate binding domain F6X00_00305 PF01266 FAD dependent oxidoreductase F6X00_00310 PF01235 Sodium:alanine symporter family F6X00_00315 PF01184 GPR1/FUN34/yaaH family F6X00_00320 PF06483 Chitinase C F6X00_00320 PF00704 Glycosyl hydrolases family 18 F6X00_00325 PF00958 GMP synthase C terminal domain F6X00_00325 PF00117 Glutamine amidotransferase class-I F6X00_00325 PF02540 NAD synthase F6X00_00330 PF00478 IMP dehydrogenase / GMP reductase domain F6X00_00330 PF00571 CBS domain F6X00_00335 PF13742 OB-fold nucleic acid binding domain F6X00_00335 PF02601 Exonuclease VII, large subunit F6X00_00345 PF00990 Diguanylate cyclase, GGDEF domain F6X00_00345 PF13185 GAF domain F6X00_00355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F6X00_00355 PF01926 50S ribosome-binding GTPase F6X00_00360 PF13360 PQQ-like domain F6X00_00365 PF09976 Tetratricopeptide repeat-like domain F6X00_00370 PF13393 Histidyl-tRNA synthetase F6X00_00370 PF03129 Anticodon binding domain F6X00_00375 PF04551 GcpE protein F6X00_00380 PF13464 Domain of unknown function (DUF4115) F6X00_00385 PF04055 Radical SAM superfamily F6X00_00390 PF00334 Nucleoside diphosphate kinase F6X00_00395 PF12404 Peptidase F6X00_00395 PF00883 Cytosol aminopeptidase family, catalytic domain F6X00_00400 PF04384 Iron-sulphur cluster assembly F6X00_00405 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_00410 PF00012 Hsp70 protein F6X00_00415 PF00226 DnaJ domain F6X00_00415 PF07743 HSCB C-terminal oligomerisation domain F6X00_00420 PF01521 Iron-sulphur cluster biosynthesis F6X00_00425 PF01592 NifU-like N terminal domain F6X00_00430 PF00266 Aminotransferase class-V F6X00_00435 PF02082 Transcriptional regulator F6X00_00440 PF00588 SpoU rRNA Methylase family F6X00_00445 PF00459 Inositol monophosphatase family F6X00_00450 PF07549 SecD/SecF GG Motif F6X00_00450 PF02355 Protein export membrane protein F6X00_00455 PF07549 SecD/SecF GG Motif F6X00_00455 PF13721 SecD export protein N-terminal TM region F6X00_00455 PF02355 Protein export membrane protein F6X00_00460 PF02699 Preprotein translocase subunit F6X00_00465 PF01702 Queuine tRNA-ribosyltransferase F6X00_00470 PF02547 Queuosine biosynthesis protein F6X00_00480 PF00571 CBS domain F6X00_00485 PF00463 Isocitrate lyase family F6X00_00490 PF01274 Malate synthase F6X00_00495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_00495 PF03466 LysR substrate binding domain F6X00_00500 PF00578 AhpC/TSA family F6X00_00500 PF10417 C-terminal domain of 1-Cys peroxiredoxin F6X00_00505 PF03932 CutC family F6X00_00510 PF03976 Polyphosphate kinase 2 (PPK2) F6X00_00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_00515 PF03466 LysR substrate binding domain F6X00_00525 PF01895 PhoU domain F6X00_00530 PF00005 ABC transporter F6X00_00535 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_00540 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_00545 PF17941 Polyphosphate kinase C-terminal domain 1 F6X00_00545 PF13090 Polyphosphate kinase C-terminal domain 2 F6X00_00545 PF02503 Polyphosphate kinase middle domain F6X00_00545 PF13089 Polyphosphate kinase N-terminal domain F6X00_00550 PF02541 Ppx/GppA phosphatase family F6X00_00555 PF12849 PBP superfamily domain F6X00_00560 PF00989 PAS fold F6X00_00560 PF11808 Phosphate regulon sensor protein PhoR F6X00_00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_00560 PF00512 His Kinase A (phospho-acceptor) domain F6X00_00565 PF00072 Response regulator receiver domain F6X00_00565 PF00486 Transcriptional regulatory protein, C terminal F6X00_00570 PF04381 Putative exonuclease, RdgC F6X00_00580 PF00037 4Fe-4S binding domain F6X00_00585 PF03411 Penicillin-insensitive murein endopeptidase F6X00_00620 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_00620 PF07724 AAA domain (Cdc48 subfamily) F6X00_00620 PF17871 AAA lid domain F6X00_00620 PF02861 Clp amino terminal domain, pathogenicity island component F6X00_00620 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_00630 PF01479 S4 domain F6X00_00630 PF00849 RNA pseudouridylate synthase F6X00_00635 PF13525 Outer membrane lipoprotein F6X00_00640 PF01609 Transposase DDE domain F6X00_00640 PF13006 Insertion element 4 transposase N-terminal F6X00_00645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F6X00_00650 PF01817 Chorismate mutase type II F6X00_00650 PF00800 Prephenate dehydratase F6X00_00655 PF01931 Protein of unknown function DUF84 F6X00_00660 PF01371 Trp repressor protein F6X00_00665 PF14718 Soluble lytic murein transglycosylase L domain F6X00_00665 PF01464 Transglycosylase SLT domain F6X00_00670 PF00005 ABC transporter F6X00_00670 PF12848 ABC transporter F6X00_00675 PF07238 PilZ domain F6X00_00680 PF01551 Peptidase family M23 F6X00_00680 PF04225 Opacity-associated protein A LysM-like domain F6X00_00685 PF01817 Chorismate mutase type II F6X00_00685 PF02153 Prephenate dehydrogenase F6X00_00690 PF00793 DAHP synthetase I family F6X00_00695 PF00933 Glycosyl hydrolase family 3 N terminal domain F6X00_00700 PF03702 Anhydro-N-acetylmuramic acid kinase F6X00_00720 PF02554 Carbon starvation protein CstA F6X00_00725 PF06580 Histidine kinase F6X00_00725 PF07694 5TMR of 5TMR-LYT F6X00_00730 PF04397 LytTr DNA-binding domain F6X00_00730 PF00072 Response regulator receiver domain F6X00_00735 PF02401 LytB protein F6X00_00740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_00745 PF01252 Signal peptidase (SPase) II F6X00_00750 PF06827 Zinc finger found in FPG and IleRS F6X00_00750 PF08264 Anticodon-binding domain of tRNA F6X00_00750 PF00133 tRNA synthetases class I (I, L, M and V) F6X00_00755 PF01687 Riboflavin kinase F6X00_00755 PF06574 FAD synthetase F6X00_00760 PF03023 Lipid II flippase MurJ F6X00_00765 PF01649 Ribosomal protein S20 F6X00_00770 PF01022 Bacterial regulatory protein, arsR family F6X00_00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_00775 PF03466 LysR substrate binding domain F6X00_00780 PF02690 Na+/Pi-cotransporter F6X00_00790 PF00303 Thymidylate synthase F6X00_00795 PF01790 Prolipoprotein diacylglyceryl transferase F6X00_00800 PF01925 Sulfite exporter TauE/SafE F6X00_00805 PF01590 GAF domain F6X00_00805 PF05524 PEP-utilising enzyme, N-terminal F6X00_00805 PF02896 PEP-utilising enzyme, TIM barrel domain F6X00_00805 PF00391 PEP-utilising enzyme, mobile domain F6X00_00810 PF00293 NUDIX domain F6X00_00815 PF02976 DNA mismatch repair enzyme MutH F6X00_00825 PF00248 Aldo/keto reductase family F6X00_00835 PF02954 Bacterial regulatory protein, Fis family F6X00_00835 PF00158 Sigma-54 interaction domain F6X00_00835 PF02830 V4R domain F6X00_00835 PF06505 Activator of aromatic catabolism F6X00_00840 PF00152 tRNA synthetases class II (D, K and N) F6X00_00840 PF01336 OB-fold nucleic acid binding domain F6X00_00850 PF01368 DHH family F6X00_00850 PF17768 RecJ OB domain F6X00_00850 PF02272 DHHA1 domain F6X00_00855 PF10411 Disulfide bond isomerase protein N-terminus F6X00_00855 PF13098 Thioredoxin-like domain F6X00_00860 PF00589 Phage integrase family F6X00_00860 PF02899 Phage integrase, N-terminal SAM-like domain F6X00_00865 PF00258 Flavodoxin F6X00_00870 PF05525 Branched-chain amino acid transport protein F6X00_00875 PF05175 Methyltransferase small domain F6X00_00880 PF00271 Helicase conserved C-terminal domain F6X00_00880 PF00270 DEAD/DEAH box helicase F6X00_00885 PF03883 Peroxide stress protein YaaA F6X00_00890 PF01235 Sodium:alanine symporter family F6X00_00905 PF03167 Uracil DNA glycosylase superfamily F6X00_00910 PF01261 Xylose isomerase-like TIM barrel F6X00_00915 PF01228 Glycine radical F6X00_00920 PF14821 Threonine synthase N terminus F6X00_00920 PF00291 Pyridoxal-phosphate dependent enzyme F6X00_00925 PF00288 GHMP kinases N terminal domain F6X00_00925 PF08544 GHMP kinases C terminal F6X00_00930 PF00696 Amino acid kinase family F6X00_00930 PF01842 ACT domain F6X00_00930 PF13840 ACT domain F6X00_00930 PF00742 Homoserine dehydrogenase F6X00_00930 PF03447 Homoserine dehydrogenase, NAD binding domain F6X00_00940 PF03737 Aldolase/RraA F6X00_00955 PF00486 Transcriptional regulatory protein, C terminal F6X00_00955 PF00072 Response regulator receiver domain F6X00_00965 PF00989 PAS fold F6X00_00965 PF00072 Response regulator receiver domain F6X00_00965 PF01627 Hpt domain F6X00_00965 PF18415 Histidine kinase receptor ArcB trans-membrane domain F6X00_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_00965 PF00512 His Kinase A (phospho-acceptor) domain F6X00_00970 PF00563 EAL domain F6X00_00970 PF00990 Diguanylate cyclase, GGDEF domain F6X00_00970 PF01590 GAF domain F6X00_00970 PF00360 Phytochrome region F6X00_00975 PF04055 Radical SAM superfamily F6X00_00975 PF16199 Radical_SAM C-terminal domain F6X00_00980 PF04898 Glutamate synthase central domain F6X00_00980 PF01645 Conserved region in glutamate synthase F6X00_00980 PF00310 Glutamine amidotransferases class-II F6X00_00980 PF01493 GXGXG motif F6X00_00985 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_00985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F6X00_00990 PF01645 Conserved region in glutamate synthase F6X00_00990 PF00310 Glutamine amidotransferases class-II F6X00_00990 PF04898 Glutamate synthase central domain F6X00_00990 PF01493 GXGXG motif F6X00_00995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F6X00_00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_01005 PF01048 Phosphorylase superfamily F6X00_01010 PF17113 Regulatory signalling modulator protein AmpE F6X00_01010 PF03186 CobD/Cbib protein F6X00_01015 PF01497 Periplasmic binding protein F6X00_01020 PF03458 UPF0126 domain F6X00_01025 PF03466 LysR substrate binding domain F6X00_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_01030 PF01925 Sulfite exporter TauE/SafE F6X00_01040 PF02142 MGS-like domain F6X00_01040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F6X00_01040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F6X00_01045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F6X00_01045 PF00117 Glutamine amidotransferase class-I F6X00_01050 PF05173 Dihydrodipicolinate reductase, C-terminus F6X00_01050 PF01113 Dihydrodipicolinate reductase, N-terminus F6X00_01055 PF00293 NUDIX domain F6X00_01060 PF07516 SecA Wing and Scaffold domain F6X00_01060 PF07517 SecA DEAD-like domain F6X00_01060 PF02810 SEC-C motif F6X00_01060 PF01043 SecA preprotein cross-linking domain F6X00_01070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F6X00_01075 PF12327 FtsZ family, C-terminal domain F6X00_01075 PF00091 Tubulin/FtsZ family, GTPase domain F6X00_01080 PF02491 SHS2 domain inserted in FTSA F6X00_01085 PF08478 POTRA domain, FtsQ-type F6X00_01085 PF03799 Cell division protein FtsQ F6X00_01090 PF01225 Mur ligase family, catalytic domain F6X00_01090 PF02875 Mur ligase family, glutamate ligase domain F6X00_01090 PF08245 Mur ligase middle domain F6X00_01095 PF04101 Glycosyltransferase family 28 C-terminal domain F6X00_01095 PF03033 Glycosyltransferase family 28 N-terminal domain F6X00_01100 PF01098 Cell cycle protein F6X00_01105 PF08245 Mur ligase middle domain F6X00_01105 PF02875 Mur ligase family, glutamate ligase domain F6X00_01110 PF00953 Glycosyl transferase family 4 F6X00_01110 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F6X00_01115 PF01225 Mur ligase family, catalytic domain F6X00_01115 PF02875 Mur ligase family, glutamate ligase domain F6X00_01115 PF08245 Mur ligase middle domain F6X00_01120 PF01225 Mur ligase family, catalytic domain F6X00_01120 PF02875 Mur ligase family, glutamate ligase domain F6X00_01120 PF08245 Mur ligase middle domain F6X00_01125 PF00905 Penicillin binding protein transpeptidase domain F6X00_01125 PF03717 Penicillin-binding Protein dimerisation domain F6X00_01130 PF04999 Cell division protein FtsL F6X00_01135 PF01795 MraW methylase family F6X00_01145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F6X00_01150 PF04348 LppC putative lipoprotein F6X00_01155 PF02021 Uncharacterised protein family UPF0102 F6X00_01160 PF13580 SIS domain F6X00_01165 PF04972 BON domain F6X00_01170 PF04386 Stringent starvation protein B F6X00_01175 PF00043 Glutathione S-transferase, C-terminal domain F6X00_01175 PF02798 Glutathione S-transferase, N-terminal domain F6X00_01180 PF02167 Cytochrome C1 family F6X00_01185 PF00033 Cytochrome b/b6/petB F6X00_01185 PF00032 Cytochrome b(C-terminal)/b6/petD F6X00_01190 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F6X00_01190 PF00355 Rieske [2Fe-2S] domain F6X00_01195 PF00380 Ribosomal protein S9/S16 F6X00_01200 PF00572 Ribosomal protein L13 F6X00_01210 PF03969 AFG1-like ATPase F6X00_01215 PF06295 Protein of unknown function (DUF1043) F6X00_01220 PF00595 PDZ domain F6X00_01225 PF13180 PDZ domain F6X00_01230 PF03989 DNA gyrase C-terminal domain, beta-propeller F6X00_01230 PF00521 DNA gyrase/topoisomerase IV, subunit A F6X00_01235 PF00204 DNA gyrase B F6X00_01235 PF00986 DNA gyrase B subunit, carboxyl terminus F6X00_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_01235 PF01751 Toprim domain F6X00_01240 PF05728 Uncharacterised protein family (UPF0227) F6X00_01245 PF00149 Calcineurin-like phosphoesterase F6X00_01250 PF06853 Protein of unknown function (DUF1249) F6X00_01255 PF00293 NUDIX domain F6X00_01260 PF02321 Outer membrane efflux protein F6X00_01265 PF01467 Cytidylyltransferase-like F6X00_01265 PF00294 pfkB family carbohydrate kinase F6X00_01270 PF08335 GlnD PII-uridylyltransferase F6X00_01270 PF03710 Glutamate-ammonia ligase adenylyltransferase F6X00_01275 PF00672 HAMP domain F6X00_01275 PF12729 Four helix bundle sensory module for signal transduction F6X00_01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_01280 PF07885 Ion channel F6X00_01285 PF01928 CYTH domain F6X00_01290 PF01865 Protein of unknown function DUF47 F6X00_01295 PF01384 Phosphate transporter family F6X00_01300 PF08239 Bacterial SH3 domain F6X00_01305 PF01471 Putative peptidoglycan binding domain F6X00_01305 PF13401 AAA domain F6X00_01310 PF12627 Probable RNA and SrmB- binding site of polymerase A F6X00_01310 PF01966 HD domain F6X00_01310 PF01743 Poly A polymerase head domain F6X00_01315 PF02673 Bacitracin resistance protein BacA F6X00_01320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F6X00_01325 PF02152 Dihydroneopterin aldolase F6X00_01330 PF02660 Glycerol-3-phosphate acyltransferase F6X00_01335 PF12697 Alpha/beta hydrolase family F6X00_01340 PF00814 Glycoprotease family F6X00_01345 PF01165 Ribosomal protein S21 F6X00_01350 PF09424 Yqey-like protein F6X00_01355 PF08278 DNA primase DnaG DnaB-binding F6X00_01355 PF10410 DnaB-helicase binding domain of primase F6X00_01355 PF08275 DNA primase catalytic core, N-terminal domain F6X00_01355 PF01807 CHC2 zinc finger F6X00_01360 PF04539 Sigma-70 region 3 F6X00_01360 PF04546 Sigma-70, non-essential region F6X00_01360 PF03979 Sigma-70 factor, region 1.1 F6X00_01360 PF00140 Sigma-70 factor, region 1.2 F6X00_01360 PF04545 Sigma-70, region 4 F6X00_01360 PF04542 Sigma-70 region 2 F6X00_01370 PF13356 Arm DNA-binding domain F6X00_01370 PF00589 Phage integrase family F6X00_01410 PF06803 Protein of unknown function (DUF1232) F6X00_01425 PF04002 RadC-like JAB domain F6X00_01430 PF02371 Transposase IS116/IS110/IS902 family F6X00_01430 PF01548 Transposase F6X00_01515 PF01820 D-ala D-ala ligase N-terminus F6X00_01515 PF07478 D-ala D-ala ligase C-terminus F6X00_01520 PF17871 AAA lid domain F6X00_01520 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_01520 PF07724 AAA domain (Cdc48 subfamily) F6X00_01520 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_01570 PF16671 Actin cross-linking domain F6X00_01570 PF04717 Type VI secretion system, phage-baseplate injector F6X00_01585 PF12833 Helix-turn-helix domain F6X00_01585 PF17853 GGDEF-like domain F6X00_01605 PF03480 Bacterial extracellular solute-binding protein, family 7 F6X00_01610 PF02378 Phosphotransferase system, EIIC F6X00_01610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F6X00_01610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_01615 PF08125 Mannitol dehydrogenase C-terminal domain F6X00_01615 PF01232 Mannitol dehydrogenase Rossmann domain F6X00_01620 PF05068 Mannitol repressor F6X00_01625 PF01380 SIS domain F6X00_01630 PF08220 DeoR-like helix-turn-helix domain F6X00_01630 PF00455 DeoR C terminal sensor domain F6X00_01635 PF00224 Pyruvate kinase, barrel domain F6X00_01635 PF02887 Pyruvate kinase, alpha/beta domain F6X00_01645 PF00990 Diguanylate cyclase, GGDEF domain F6X00_01645 PF07694 5TMR of 5TMR-LYT F6X00_01650 PF10369 Small subunit of acetolactate synthase F6X00_01655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F6X00_01655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F6X00_01655 PF00205 Thiamine pyrophosphate enzyme, central domain F6X00_01660 PF00501 AMP-binding enzyme F6X00_01665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_01665 PF03466 LysR substrate binding domain F6X00_01675 PF01569 PAP2 superfamily F6X00_01685 PF08502 LeuA allosteric (dimerisation) domain F6X00_01685 PF00682 HMGL-like F6X00_01690 PF00180 Isocitrate/isopropylmalate dehydrogenase F6X00_01695 PF00330 Aconitase family (aconitate hydratase) F6X00_01700 PF00694 Aconitase C-terminal domain F6X00_01710 PF00226 DnaJ domain F6X00_01710 PF05099 Tellurite resistance protein TerB F6X00_01715 PF04453 LPS transport system D F6X00_01715 PF03968 OstA-like protein F6X00_01720 PF09312 SurA N-terminal domain F6X00_01720 PF00639 PPIC-type PPIASE domain F6X00_01725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F6X00_01730 PF00398 Ribosomal RNA adenine dimethylase F6X00_01735 PF04379 ApaG domain F6X00_01740 PF00149 Calcineurin-like phosphoesterase F6X00_01745 PF00186 Dihydrofolate reductase F6X00_01750 PF12821 Threonine/Serine exporter, ThrE F6X00_01755 PF06738 Putative threonine/serine exporter F6X00_01760 PF01926 50S ribosome-binding GTPase F6X00_01760 PF01018 GTP1/OBG F6X00_01765 PF01016 Ribosomal L27 protein F6X00_01770 PF00829 Ribosomal prokaryotic L21 protein F6X00_01775 PF00348 Polyprenyl synthetase F6X00_01780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F6X00_01780 PF00056 lactate/malate dehydrogenase, NAD binding domain F6X00_01785 PF02863 Arginine repressor, C-terminal domain F6X00_01785 PF01316 Arginine repressor, DNA binding domain F6X00_01790 PF16868 NMT1-like family F6X00_01800 PF00582 Universal stress protein family F6X00_01805 PF01553 Acyltransferase F6X00_01810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F6X00_01815 PF01722 BolA-like protein F6X00_01825 PF05494 MlaC protein F6X00_01830 PF02470 MlaD protein F6X00_01835 PF02405 Permease MlaE F6X00_01840 PF00005 ABC transporter F6X00_01845 PF01699 Sodium/calcium exchanger protein F6X00_01850 PF00571 CBS domain F6X00_01850 PF01380 SIS domain F6X00_01865 PF03968 OstA-like protein F6X00_01870 PF12399 Branched-chain amino acid ATP-binding cassette transporter F6X00_01870 PF00005 ABC transporter F6X00_01875 PF04963 Sigma-54 factor, core binding domain F6X00_01875 PF04552 Sigma-54, DNA binding domain F6X00_01875 PF00309 Sigma-54 factor, Activator interacting domain (AID) F6X00_01880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F6X00_01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_01890 PF03668 P-loop ATPase protein family F6X00_01895 PF00381 PTS HPr component phosphorylation site F6X00_01900 PF03448 MgtE intracellular N domain F6X00_01900 PF01769 Divalent cation transporter F6X00_01900 PF00571 CBS domain F6X00_01905 PF01523 Putative modulator of DNA gyrase F6X00_01910 PF04751 Protein of unknown function (DUF615) F6X00_01915 PF00005 ABC transporter F6X00_01920 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_01930 PF02441 Flavoprotein F6X00_01935 PF01225 Mur ligase family, catalytic domain F6X00_01935 PF08245 Mur ligase middle domain F6X00_01935 PF02875 Mur ligase family, glutamate ligase domain F6X00_01940 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F6X00_01945 PF00719 Inorganic pyrophosphatase F6X00_01955 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F6X00_01960 PF04357 TamB, inner membrane protein subunit of TAM complex F6X00_01965 PF17243 POTRA domain TamA domain 1 F6X00_01965 PF07244 Surface antigen variable number repeat F6X00_01965 PF01103 Surface antigen F6X00_01970 PF01625 Peptide methionine sulfoxide reductase F6X00_01980 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F6X00_01995 PF02687 FtsX-like permease family F6X00_01995 PF00005 ABC transporter F6X00_01995 PF12704 MacB-like periplasmic core domain F6X00_02020 PF03600 Citrate transporter F6X00_02020 PF02080 TrkA-C domain F6X00_02025 PF00009 Elongation factor Tu GTP binding domain F6X00_02030 PF01507 Phosphoadenosine phosphosulfate reductase family F6X00_02035 PF10414 Sirohaem synthase dimerisation region F6X00_02035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F6X00_02035 PF14824 Sirohaem biosynthesis protein central F6X00_02040 PF00149 Calcineurin-like phosphoesterase F6X00_02040 PF02872 5'-nucleotidase, C-terminal domain F6X00_02050 PF13673 Acetyltransferase (GNAT) domain F6X00_02060 PF04225 Opacity-associated protein A LysM-like domain F6X00_02060 PF08525 Opacity-associated protein A N-terminal motif F6X00_02065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F6X00_02065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_02075 PF01196 Ribosomal protein L17 F6X00_02080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F6X00_02080 PF01000 RNA polymerase Rpb3/RpoA insert domain F6X00_02080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F6X00_02085 PF00163 Ribosomal protein S4/S9 N-terminal domain F6X00_02085 PF01479 S4 domain F6X00_02090 PF00411 Ribosomal protein S11 F6X00_02095 PF00416 Ribosomal protein S13/S18 F6X00_02100 PF00444 Ribosomal protein L36 F6X00_02105 PF00344 SecY translocase F6X00_02110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F6X00_02115 PF00327 Ribosomal protein L30p/L7e F6X00_02120 PF03719 Ribosomal protein S5, C-terminal domain F6X00_02120 PF00333 Ribosomal protein S5, N-terminal domain F6X00_02125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F6X00_02130 PF00347 Ribosomal protein L6 F6X00_02135 PF00410 Ribosomal protein S8 F6X00_02140 PF00253 Ribosomal protein S14p/S29e F6X00_02145 PF00673 ribosomal L5P family C-terminus F6X00_02145 PF00281 Ribosomal protein L5 F6X00_02150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F6X00_02150 PF00467 KOW motif F6X00_02155 PF00238 Ribosomal protein L14p/L23e F6X00_02160 PF00366 Ribosomal protein S17 F6X00_02165 PF00831 Ribosomal L29 protein F6X00_02170 PF00252 Ribosomal protein L16p/L10e F6X00_02175 PF00189 Ribosomal protein S3, C-terminal domain F6X00_02175 PF07650 KH domain F6X00_02180 PF00237 Ribosomal protein L22p/L17e F6X00_02185 PF00203 Ribosomal protein S19 F6X00_02190 PF00181 Ribosomal Proteins L2, RNA binding domain F6X00_02190 PF03947 Ribosomal Proteins L2, C-terminal domain F6X00_02195 PF00276 Ribosomal protein L23 F6X00_02200 PF00573 Ribosomal protein L4/L1 family F6X00_02205 PF00297 Ribosomal protein L3 F6X00_02210 PF00338 Ribosomal protein S10p/S20e F6X00_02220 PF13322 Domain of unknown function (DUF4092) F6X00_02220 PF17291 N-terminal domain of M60-like peptidases F6X00_02220 PF13402 Peptidase M60, enhancin and enhancin-like F6X00_02270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F6X00_02270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F6X00_02270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F6X00_02275 PF02719 Polysaccharide biosynthesis protein F6X00_02280 PF02397 Bacterial sugar transferase F6X00_02285 PF01370 NAD dependent epimerase/dehydratase family F6X00_02325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F6X00_02325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F6X00_02325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F6X00_02330 PF02350 UDP-N-acetylglucosamine 2-epimerase F6X00_02335 PF02706 Chain length determinant protein F6X00_02335 PF13807 G-rich domain on putative tyrosine kinase F6X00_02335 PF13614 AAA domain F6X00_02340 PF01451 Low molecular weight phosphotyrosine protein phosphatase F6X00_02350 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F6X00_02350 PF10531 SLBB domain F6X00_02350 PF02563 Polysaccharide biosynthesis/export protein F6X00_02385 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF F6X00_02395 PF06082 Exopolysaccharide biosynthesis protein YbjH F6X00_02400 PF01370 NAD dependent epimerase/dehydratase family F6X00_02405 PF03279 Bacterial lipid A biosynthesis acyltransferase F6X00_02410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F6X00_02415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F6X00_02425 PF08666 SAF domain F6X00_02425 PF03102 NeuB family F6X00_02435 PF02348 Cytidylyltransferase F6X00_02440 PF00977 Histidine biosynthesis protein F6X00_02445 PF00117 Glutamine amidotransferase class-I F6X00_02455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F6X00_02460 PF02719 Polysaccharide biosynthesis protein F6X00_02475 PF11893 Domain of unknown function (DUF3413) F6X00_02475 PF00884 Sulfatase F6X00_02485 PF01219 Prokaryotic diacylglycerol kinase F6X00_02490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F6X00_02495 PF00535 Glycosyl transferase family 2 F6X00_02500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F6X00_02505 PF01467 Cytidylyltransferase-like F6X00_02515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F6X00_02515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F6X00_02515 PF06827 Zinc finger found in FPG and IleRS F6X00_02525 PF00471 Ribosomal protein L33 F6X00_02530 PF00830 Ribosomal L28 family F6X00_02535 PF04002 RadC-like JAB domain F6X00_02540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_02540 PF00672 HAMP domain F6X00_02540 PF02743 Cache domain F6X00_02545 PF02441 Flavoprotein F6X00_02545 PF04127 DNA / pantothenate metabolism flavoprotein F6X00_02550 PF00440 Bacterial regulatory proteins, tetR family F6X00_02555 PF03279 Bacterial lipid A biosynthesis acyltransferase F6X00_02560 PF00156 Phosphoribosyl transferase domain F6X00_02565 PF03725 3' exoribonuclease family, domain 2 F6X00_02565 PF01138 3' exoribonuclease family, domain 1 F6X00_02570 PF03755 YicC-like family, N-terminal region F6X00_02570 PF08340 Domain of unknown function (DUF1732) F6X00_02575 PF00892 EamA-like transporter family F6X00_02595 PF00005 ABC transporter F6X00_02595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_02600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_02600 PF00005 ABC transporter F6X00_02605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_02610 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_02610 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_02615 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_02620 PF07715 TonB-dependent Receptor Plug Domain F6X00_02620 PF00593 TonB dependent receptor F6X00_02630 PF01618 MotA/TolQ/ExbB proton channel family F6X00_02635 PF01618 MotA/TolQ/ExbB proton channel family F6X00_02640 PF02472 Biopolymer transport protein ExbD/TolR F6X00_02655 PF00625 Guanylate kinase F6X00_02660 PF01192 RNA polymerase Rpb6 F6X00_02665 PF04607 Region found in RelA / SpoT proteins F6X00_02665 PF13291 ACT domain F6X00_02665 PF02824 TGS domain F6X00_02670 PF12105 SpoU, rRNA methylase, C-terminal F6X00_02670 PF00588 SpoU rRNA Methylase family F6X00_02675 PF17191 RecG wedge domain F6X00_02675 PF00271 Helicase conserved C-terminal domain F6X00_02675 PF00270 DEAD/DEAH box helicase F6X00_02680 PF00860 Permease family F6X00_02685 PF00672 HAMP domain F6X00_02685 PF00512 His Kinase A (phospho-acceptor) domain F6X00_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_02690 PF00072 Response regulator receiver domain F6X00_02690 PF00486 Transcriptional regulatory protein, C terminal F6X00_02695 PF01272 Transcription elongation factor, GreA/GreB, C-term F6X00_02695 PF03449 Transcription elongation factor, N-terminal F6X00_02700 PF09371 Tex-like protein N-terminal domain F6X00_02700 PF17674 HHH domain F6X00_02700 PF16921 Tex protein YqgF-like domain F6X00_02700 PF00575 S1 RNA binding domain F6X00_02710 PF00561 alpha/beta hydrolase fold F6X00_02715 PF00156 Phosphoribosyl transferase domain F6X00_02720 PF01521 Iron-sulphur cluster biosynthesis F6X00_02720 PF01106 NifU-like domain F6X00_02725 PF00293 NUDIX domain F6X00_02730 PF00459 Inositol monophosphatase family F6X00_02735 PF01203 Type II secretion system (T2SS), protein N F6X00_02740 PF04612 Type II secretion system (T2SS), protein M F6X00_02745 PF05134 Type II secretion system (T2SS), protein L F6X00_02745 PF12693 GspL periplasmic domain F6X00_02750 PF03934 Type II secretion system (T2SS), protein K F6X00_02755 PF11612 Type II secretion system (T2SS), protein J F6X00_02755 PF07963 Prokaryotic N-terminal methylation motif F6X00_02760 PF07963 Prokaryotic N-terminal methylation motif F6X00_02760 PF02501 Type II secretion system (T2SS), protein I F6X00_02765 PF12019 Type II transport protein GspH F6X00_02770 PF07963 Prokaryotic N-terminal methylation motif F6X00_02770 PF08334 Type II secretion system (T2SS), protein G F6X00_02775 PF00482 Type II secretion system (T2SS), protein F F6X00_02780 PF00437 Type II/IV secretion system protein F6X00_02785 PF03958 Bacterial type II/III secretion system short domain F6X00_02785 PF00263 Bacterial type II and III secretion system protein F6X00_02790 PF11356 Type II secretion system protein C F6X00_02795 PF01479 S4 domain F6X00_02800 PF01430 Hsp33 protein F6X00_02805 PF01293 Phosphoenolpyruvate carboxykinase F6X00_02815 PF00583 Acetyltransferase (GNAT) family F6X00_02815 PF09500 Putative thioesterase (yiiD_Cterm) F6X00_02820 PF02580 D-Tyr-tRNA(Tyr) deacylase F6X00_02825 PF03631 Virulence factor BrkB F6X00_02850 PF00120 Glutamine synthetase, catalytic domain F6X00_02850 PF03951 Glutamine synthetase, beta-Grasp domain F6X00_02860 PF00512 His Kinase A (phospho-acceptor) domain F6X00_02860 PF00989 PAS fold F6X00_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_02865 PF00072 Response regulator receiver domain F6X00_02865 PF00158 Sigma-54 interaction domain F6X00_02865 PF02954 Bacterial regulatory protein, Fis family F6X00_02870 PF13188 PAS domain F6X00_02870 PF03707 Bacterial signalling protein N terminal repeat F6X00_02870 PF00990 Diguanylate cyclase, GGDEF domain F6X00_02870 PF00563 EAL domain F6X00_02875 PF04055 Radical SAM superfamily F6X00_02875 PF06969 HemN C-terminal domain F6X00_02880 PF10675 Protein of unknown function (DUF2489) F6X00_02885 PF04220 Der GTPase activator (YihI) F6X00_02895 PF00034 Cytochrome c F6X00_02900 PF01926 50S ribosome-binding GTPase F6X00_02905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F6X00_02905 PF01367 5'-3' exonuclease, C-terminal SAM fold F6X00_02905 PF01612 3'-5' exonuclease F6X00_02905 PF00476 DNA polymerase family A F6X00_02910 PF00490 Delta-aminolevulinic acid dehydratase F6X00_02915 PF01026 TatD related DNase F6X00_02920 PF00902 Sec-independent protein translocase protein (TatC) F6X00_02925 PF02416 mttA/Hcf106 family F6X00_02930 PF02416 mttA/Hcf106 family F6X00_02935 PF03109 ABC1 family F6X00_02940 PF02036 SCP-2 sterol transfer family F6X00_02945 PF01209 ubiE/COQ5 methyltransferase family F6X00_02950 PF02646 RmuC family F6X00_03040 PF00175 Oxidoreductase NAD-binding domain F6X00_03045 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_03045 PF00175 Oxidoreductase NAD-binding domain F6X00_03045 PF00970 Oxidoreductase FAD-binding domain F6X00_03050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F6X00_03060 PF07497 Rho termination factor, RNA-binding domain F6X00_03060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F6X00_03060 PF07498 Rho termination factor, N-terminal domain F6X00_03065 PF00085 Thioredoxin F6X00_03070 PF00271 Helicase conserved C-terminal domain F6X00_03070 PF00270 DEAD/DEAH box helicase F6X00_03075 PF02541 Ppx/GppA phosphatase family F6X00_03080 PF02592 Putative vitamin uptake transporter F6X00_03095 PF00270 DEAD/DEAH box helicase F6X00_03095 PF00271 Helicase conserved C-terminal domain F6X00_03095 PF00570 HRDC domain F6X00_03095 PF09382 RQC domain F6X00_03095 PF16124 RecQ zinc-binding F6X00_03100 PF00892 EamA-like transporter family F6X00_03110 PF01810 LysE type translocator F6X00_03120 PF00580 UvrD/REP helicase N-terminal domain F6X00_03120 PF13361 UvrD-like helicase C-terminal domain F6X00_03130 PF05114 Protein of unknown function (DUF692) F6X00_03150 PF07690 Major Facilitator Superfamily F6X00_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_03155 PF03466 LysR substrate binding domain F6X00_03160 PF01321 Creatinase/Prolidase N-terminal domain F6X00_03160 PF01321 Creatinase/Prolidase N-terminal domain F6X00_03160 PF00557 Metallopeptidase family M24 F6X00_03160 PF00557 Metallopeptidase family M24 F6X00_03165 PF04055 Radical SAM superfamily F6X00_03165 PF06968 Biotin and Thiamin Synthesis associated domain F6X00_03170 PF05690 Thiazole biosynthesis protein ThiG F6X00_03180 PF00899 ThiF family F6X00_03185 PF02581 Thiamine monophosphate synthase F6X00_03190 PF13667 ThiC-associated domain F6X00_03190 PF01964 Radical SAM ThiC family F6X00_03195 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F6X00_03200 PF07731 Multicopper oxidase F6X00_03200 PF07732 Multicopper oxidase F6X00_03200 PF00394 Multicopper oxidase F6X00_03235 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_03240 PF07369 Protein of unknown function (DUF1488) F6X00_03245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F6X00_03245 PF01488 Shikimate / quinate 5-dehydrogenase F6X00_03245 PF08501 Shikimate dehydrogenase substrate binding domain F6X00_03250 PF01218 Coproporphyrinogen III oxidase F6X00_03255 PF01300 Telomere recombination F6X00_03260 PF00731 AIR carboxylase F6X00_03265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F6X00_03265 PF02222 ATP-grasp domain F6X00_03270 PF01396 Topoisomerase DNA binding C4 zinc finger F6X00_03275 PF04361 Protein of unknown function (DUF494) F6X00_03280 PF17782 DprA winged helix domain F6X00_03280 PF02481 DNA recombination-mediator protein A F6X00_03290 PF01327 Polypeptide deformylase F6X00_03295 PF02911 Formyl transferase, C-terminal domain F6X00_03295 PF00551 Formyl transferase F6X00_03300 PF01189 16S rRNA methyltransferase RsmB/F F6X00_03300 PF01029 NusB family F6X00_03305 PF02254 TrkA-N domain F6X00_03305 PF02080 TrkA-C domain F6X00_03310 PF02386 Cation transport protein F6X00_03315 PF03006 Haemolysin-III related F6X00_03320 PF07070 SpoOM protein F6X00_03325 PF06288 Protein of unknown function (DUF1040) F6X00_03330 PF12801 4Fe-4S binding domain F6X00_03330 PF13746 4Fe-4S dicluster domain F6X00_03330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase F6X00_03335 PF01636 Phosphotransferase enzyme family F6X00_03340 PF01323 DSBA-like thioredoxin domain F6X00_03345 PF01553 Acyltransferase F6X00_03380 PF00239 Resolvase, N terminal domain F6X00_03380 PF02796 Helix-turn-helix domain of resolvase F6X00_03395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F6X00_03395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F6X00_03395 PF00205 Thiamine pyrophosphate enzyme, central domain F6X00_03405 PF01063 Amino-transferase class IV F6X00_03410 PF00920 Dehydratase family F6X00_03415 PF00585 C-terminal regulatory domain of Threonine dehydratase F6X00_03415 PF00291 Pyridoxal-phosphate dependent enzyme F6X00_03420 PF03466 LysR substrate binding domain F6X00_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_03425 PF07690 Major Facilitator Superfamily F6X00_03430 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_03435 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_03440 PF12804 MobA-like NTP transferase domain F6X00_03440 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_03445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F6X00_03445 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F6X00_03450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F6X00_03450 PF02874 ATP synthase alpha/beta family, beta-barrel domain F6X00_03455 PF00231 ATP synthase F6X00_03460 PF02874 ATP synthase alpha/beta family, beta-barrel domain F6X00_03460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F6X00_03460 PF00306 ATP synthase alpha/beta chain, C terminal domain F6X00_03465 PF00213 ATP synthase delta (OSCP) subunit F6X00_03470 PF00430 ATP synthase B/B' CF(0) F6X00_03475 PF00137 ATP synthase subunit C F6X00_03480 PF00119 ATP synthase A chain F6X00_03485 PF03899 ATP synthase I chain F6X00_03490 PF17762 HTH domain found in ParB protein F6X00_03490 PF02195 ParB-like nuclease domain F6X00_03495 PF13614 AAA domain F6X00_03500 PF02527 rRNA small subunit methyltransferase G F6X00_03505 PF13932 GidA associated domain F6X00_03505 PF01134 Glucose inhibited division protein A F6X00_03510 PF00258 Flavodoxin F6X00_03515 PF01926 50S ribosome-binding GTPase F6X00_03515 PF12631 MnmE helical domain F6X00_03515 PF10396 GTP-binding protein TrmE N-terminus F6X00_03520 PF02096 60Kd inner membrane protein F6X00_03520 PF14849 YidC periplasmic domain F6X00_03525 PF01809 Putative membrane protein insertion efficiency factor F6X00_03530 PF00825 Ribonuclease P F6X00_03535 PF00468 Ribosomal protein L34 F6X00_03540 PF00005 ABC transporter F6X00_03545 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_03550 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_03555 PF11638 DnaA N-terminal domain F6X00_03555 PF08299 Bacterial dnaA protein helix-turn-helix F6X00_03555 PF00308 Bacterial dnaA protein F6X00_03560 PF00712 DNA polymerase III beta subunit, N-terminal domain F6X00_03560 PF02768 DNA polymerase III beta subunit, C-terminal domain F6X00_03560 PF02767 DNA polymerase III beta subunit, central domain F6X00_03565 PF02463 RecF/RecN/SMC N terminal domain F6X00_03570 PF18053 DNA gyrase B subunit insert domain F6X00_03570 PF00204 DNA gyrase B F6X00_03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_03570 PF01751 Toprim domain F6X00_03570 PF00986 DNA gyrase B subunit, carboxyl terminus F6X00_03575 PF00011 Hsp20/alpha crystallin family F6X00_03580 PF03707 Bacterial signalling protein N terminal repeat F6X00_03580 PF00990 Diguanylate cyclase, GGDEF domain F6X00_03580 PF00563 EAL domain F6X00_03585 PF00155 Aminotransferase class I and II F6X00_03590 PF02092 Glycyl-tRNA synthetase beta subunit F6X00_03590 PF05746 DALR anticodon binding domain F6X00_03595 PF02091 Glycyl-tRNA synthetase alpha subunit F6X00_03600 PF01169 Uncharacterized protein family UPF0016 F6X00_03610 PF01206 Sulfurtransferase TusA F6X00_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_03620 PF03466 LysR substrate binding domain F6X00_03625 PF00107 Zinc-binding dehydrogenase F6X00_03625 PF08240 Alcohol dehydrogenase GroES-like domain F6X00_03630 PF00108 Thiolase, N-terminal domain F6X00_03630 PF02803 Thiolase, C-terminal domain F6X00_03635 PF00378 Enoyl-CoA hydratase/isomerase F6X00_03635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F6X00_03635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F6X00_03640 PF01205 Uncharacterized protein family UPF0029 F6X00_03640 PF09186 Domain of unknown function (DUF1949) F6X00_03645 PF02386 Cation transport protein F6X00_03650 PF12724 Flavodoxin domain F6X00_03690 PF03466 LysR substrate binding domain F6X00_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_03695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F6X00_03695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F6X00_03700 PF04380 Membrane fusogenic activity F6X00_03705 PF00873 AcrB/AcrD/AcrF family F6X00_03710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_03715 PF00440 Bacterial regulatory proteins, tetR family F6X00_03720 PF00580 UvrD/REP helicase N-terminal domain F6X00_03720 PF13361 UvrD-like helicase C-terminal domain F6X00_03725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F6X00_03755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_03755 PF00005 ABC transporter F6X00_03760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_03770 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_03770 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_03805 PF00069 Protein kinase domain F6X00_03805 PF03793 PASTA domain F6X00_03815 PF00072 Response regulator receiver domain F6X00_03820 PF00356 Bacterial regulatory proteins, lacI family F6X00_03820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F6X00_03825 PF00920 Dehydratase family F6X00_03830 PF01202 Shikimate kinase F6X00_03835 PF02447 GntP family permease F6X00_03840 PF01081 KDPG and KHG aldolase F6X00_03845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F6X00_03845 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_03850 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F6X00_03855 PF01432 Peptidase family M3 F6X00_03860 PF01037 Lrp/AsnC ligand binding domain F6X00_03865 PF00563 EAL domain F6X00_03865 PF00990 Diguanylate cyclase, GGDEF domain F6X00_03865 PF08448 PAS fold F6X00_03870 PF04445 Putative SAM-dependent methyltransferase F6X00_03880 PF00892 EamA-like transporter family F6X00_03885 PF00582 Universal stress protein family F6X00_03890 PF00210 Ferritin-like domain F6X00_03895 PF10625 Universal stress protein B (UspB) F6X00_03910 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F6X00_03915 PF02602 Uroporphyrinogen-III synthase HemD F6X00_03920 PF03900 Porphobilinogen deaminase, C-terminal domain F6X00_03920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F6X00_03925 PF12633 Adenylate cyclase NT domain F6X00_03925 PF01295 Adenylate cyclase, class-I F6X00_03930 PF01491 Frataxin-like domain F6X00_03940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F6X00_03940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F6X00_03945 PF01678 Diaminopimelate epimerase F6X00_03955 PF00589 Phage integrase family F6X00_03955 PF02899 Phage integrase, N-terminal SAM-like domain F6X00_03960 PF13419 Haloacid dehalogenase-like hydrolase F6X00_03965 PF10442 FIST C domain F6X00_03965 PF00563 EAL domain F6X00_03965 PF08495 FIST N domain F6X00_03965 PF00990 Diguanylate cyclase, GGDEF domain F6X00_03990 PF12146 Serine aminopeptidase, S33 F6X00_03995 PF01810 LysE type translocator F6X00_04000 PF08668 HDOD domain F6X00_04000 PF00563 EAL domain F6X00_04005 PF01022 Bacterial regulatory protein, arsR family F6X00_04010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F6X00_04010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F6X00_04055 PF01914 MarC family integral membrane protein F6X00_04070 PF00448 SRP54-type protein, GTPase domain F6X00_04070 PF02881 SRP54-type protein, helical bundle domain F6X00_04075 PF00005 ABC transporter F6X00_04080 PF18075 FtsX extracellular domain F6X00_04085 PF04545 Sigma-70, region 4 F6X00_04085 PF00140 Sigma-70 factor, region 1.2 F6X00_04085 PF04542 Sigma-70 region 2 F6X00_04090 PF00581 Rhodanese-like domain F6X00_04095 PF01694 Rhomboid family F6X00_04095 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F6X00_04100 PF03748 Flagellar basal body-associated protein FliL F6X00_04105 PF04345 Chorismate lyase F6X00_04110 PF01040 UbiA prenyltransferase family F6X00_04115 PF01553 Acyltransferase F6X00_04125 PF01726 LexA DNA binding domain F6X00_04125 PF00717 Peptidase S24-like F6X00_04135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F6X00_04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_04140 PF00440 Bacterial regulatory proteins, tetR family F6X00_04180 PF00075 RNase H F6X00_04190 PF03466 LysR substrate binding domain F6X00_04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_04225 PF05861 Bacterial phosphonate metabolism protein (PhnI) F6X00_04230 PF06007 Phosphonate metabolism protein PhnJ F6X00_04235 PF00005 ABC transporter F6X00_04240 PF00005 ABC transporter F6X00_04245 PF13609 Gram-negative porin F6X00_04290 PF04002 RadC-like JAB domain F6X00_04315 PF05958 tRNA (Uracil-5-)-methyltransferase F6X00_04345 PF13411 MerR HTH family regulatory protein F6X00_04360 PF00529 HlyD membrane-fusion protein of T1SS F6X00_04360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_04380 PF00072 Response regulator receiver domain F6X00_04380 PF09308 LuxQ, periplasmic F6X00_04380 PF00512 His Kinase A (phospho-acceptor) domain F6X00_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_04440 PF16123 Hydroxyacylglutathione hydrolase C-terminus F6X00_04440 PF00753 Metallo-beta-lactamase superfamily F6X00_04455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_04470 PF00465 Iron-containing alcohol dehydrogenase F6X00_04475 PF02368 Bacterial Ig-like domain (group 2) F6X00_04475 PF11999 Protein of unknown function (DUF3494) F6X00_04485 PF13737 Transposase DDE domain F6X00_04495 PF10544 T5orf172 domain F6X00_04510 PF00593 TonB dependent receptor F6X00_04510 PF07715 TonB-dependent Receptor Plug Domain F6X00_04520 PF01177 Asp/Glu/Hydantoin racemase F6X00_04600 PF13091 PLD-like domain F6X00_04610 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F6X00_04610 PF01565 FAD binding domain F6X00_04615 PF02237 Biotin protein ligase C terminal domain F6X00_04615 PF03099 Biotin/lipoate A/B protein ligase family F6X00_04615 PF08279 HTH domain F6X00_04620 PF00485 Phosphoribulokinase / Uridine kinase family F6X00_04645 PF03144 Elongation factor Tu domain 2 F6X00_04645 PF00009 Elongation factor Tu GTP binding domain F6X00_04645 PF03143 Elongation factor Tu C-terminal domain F6X00_04650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F6X00_04655 PF00467 KOW motif F6X00_04655 PF02357 Transcription termination factor nusG F6X00_04660 PF03946 Ribosomal protein L11, N-terminal domain F6X00_04660 PF00298 Ribosomal protein L11, RNA binding domain F6X00_04665 PF00687 Ribosomal protein L1p/L10e family F6X00_04670 PF00466 Ribosomal protein L10 F6X00_04675 PF16320 Ribosomal protein L7/L12 dimerisation domain F6X00_04675 PF00542 Ribosomal protein L7/L12 C-terminal domain F6X00_04680 PF04563 RNA polymerase beta subunit F6X00_04680 PF04561 RNA polymerase Rpb2, domain 2 F6X00_04680 PF04565 RNA polymerase Rpb2, domain 3 F6X00_04680 PF10385 RNA polymerase beta subunit external 1 domain F6X00_04680 PF04560 RNA polymerase Rpb2, domain 7 F6X00_04680 PF00562 RNA polymerase Rpb2, domain 6 F6X00_04685 PF05000 RNA polymerase Rpb1, domain 4 F6X00_04685 PF04998 RNA polymerase Rpb1, domain 5 F6X00_04685 PF04997 RNA polymerase Rpb1, domain 1 F6X00_04685 PF04983 RNA polymerase Rpb1, domain 3 F6X00_04685 PF00623 RNA polymerase Rpb1, domain 2 F6X00_04690 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F6X00_04695 PF09297 NADH pyrophosphatase zinc ribbon domain F6X00_04695 PF00293 NUDIX domain F6X00_04710 PF01208 Uroporphyrinogen decarboxylase (URO-D) F6X00_04715 PF03167 Uracil DNA glycosylase superfamily F6X00_04720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_04720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_04725 PF04222 Protein of unknown function (DUF416) F6X00_04730 PF00571 CBS domain F6X00_04730 PF01595 Cyclin M transmembrane N-terminal domain F6X00_04735 PF00216 Bacterial DNA-binding protein F6X00_04745 PF02844 Phosphoribosylglycinamide synthetase, N domain F6X00_04745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F6X00_04745 PF02843 Phosphoribosylglycinamide synthetase, C domain F6X00_04750 PF01808 AICARFT/IMPCHase bienzyme F6X00_04750 PF02142 MGS-like domain F6X00_04755 PF13411 MerR HTH family regulatory protein F6X00_04760 PF00672 HAMP domain F6X00_04760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_04760 PF17200 Single Cache domain 2 F6X00_04765 PF02954 Bacterial regulatory protein, Fis family F6X00_04770 PF01207 Dihydrouridine synthase (Dus) F6X00_04780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F6X00_04780 PF02785 Biotin carboxylase C-terminal domain F6X00_04780 PF00289 Biotin carboxylase, N-terminal domain F6X00_04785 PF00364 Biotin-requiring enzyme F6X00_04790 PF01220 Dehydroquinase class II F6X00_04795 PF00501 AMP-binding enzyme F6X00_04795 PF16177 Acetyl-coenzyme A synthetase N-terminus F6X00_04795 PF13193 AMP-binding enzyme C-terminal domain F6X00_04810 PF12832 MFS_1 like family F6X00_04815 PF00672 HAMP domain F6X00_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_04815 PF00512 His Kinase A (phospho-acceptor) domain F6X00_04815 PF00072 Response regulator receiver domain F6X00_04815 PF01627 Hpt domain F6X00_04830 PF00474 Sodium:solute symporter family F6X00_04840 PF01914 MarC family integral membrane protein F6X00_04845 PF00196 Bacterial regulatory proteins, luxR family F6X00_04845 PF00072 Response regulator receiver domain F6X00_04850 PF02683 Cytochrome C biogenesis protein transmembrane region F6X00_04850 PF11412 Disulphide bond corrector protein DsbC F6X00_04855 PF03605 Anaerobic c4-dicarboxylate membrane transporter F6X00_04860 PF10415 Fumarase C C-terminus F6X00_04860 PF00206 Lyase F6X00_04865 PF04186 FxsA cytoplasmic membrane protein F6X00_04870 PF00588 SpoU rRNA Methylase family F6X00_04875 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F6X00_04875 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F6X00_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_04880 PF16527 Two-component sensor protein CpxA, periplasmic domain F6X00_04880 PF00672 HAMP domain F6X00_04880 PF00512 His Kinase A (phospho-acceptor) domain F6X00_04885 PF00486 Transcriptional regulatory protein, C terminal F6X00_04885 PF00072 Response regulator receiver domain F6X00_04895 PF16916 Dimerisation domain of Zinc Transporter F6X00_04895 PF01545 Cation efflux family F6X00_04900 PF00365 Phosphofructokinase F6X00_04905 PF01554 MatE F6X00_04910 PF00166 Chaperonin 10 Kd subunit F6X00_04915 PF00118 TCP-1/cpn60 chaperonin family F6X00_04925 PF02308 MgtC family F6X00_04930 PF04055 Radical SAM superfamily F6X00_04935 PF01132 Elongation factor P (EF-P) OB domain F6X00_04935 PF08207 Elongation factor P (EF-P) KOW-like domain F6X00_04935 PF09285 Elongation factor P, C-terminal F6X00_04950 PF02313 Fumarate reductase subunit D F6X00_04955 PF02300 Fumarate reductase subunit C F6X00_04960 PF13085 2Fe-2S iron-sulfur cluster binding domain F6X00_04960 PF13183 4Fe-4S dicluster domain F6X00_04965 PF00890 FAD binding domain F6X00_04965 PF02910 Fumarate reductase flavoprotein C-term F6X00_04970 PF00152 tRNA synthetases class II (D, K and N) F6X00_04980 PF08360 QacR-like protein, C-terminal region F6X00_04980 PF00440 Bacterial regulatory proteins, tetR family F6X00_04990 PF01551 Peptidase family M23 F6X00_04995 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_04995 PF06426 Serine acetyltransferase, N-terminal F6X00_05000 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F6X00_05000 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F6X00_05005 PF02556 Preprotein translocase subunit SecB F6X00_05010 PF00581 Rhodanese-like domain F6X00_05020 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F6X00_05020 PF01676 Metalloenzyme superfamily F6X00_05030 PF00939 Sodium:sulfate symporter transmembrane region F6X00_05035 PF02666 Phosphatidylserine decarboxylase F6X00_05040 PF03193 RsgA GTPase F6X00_05045 PF00929 Exonuclease F6X00_05110 PF08331 Domain of unknown function (DUF1730) F6X00_05115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F6X00_05120 PF01520 N-acetylmuramoyl-L-alanine amidase F6X00_05125 PF08676 MutL C terminal dimerisation domain F6X00_05125 PF01119 DNA mismatch repair protein, C-terminal domain F6X00_05135 PF17209 Hfq protein F6X00_05140 PF13167 GTP-binding GTPase N-terminal F6X00_05140 PF01926 50S ribosome-binding GTPase F6X00_05140 PF16360 GTP-binding GTPase Middle Region F6X00_05145 PF01145 SPFH domain / Band 7 family F6X00_05145 PF12221 Bacterial membrane protein N terminal F6X00_05150 PF01145 SPFH domain / Band 7 family F6X00_05155 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F6X00_05160 PF00709 Adenylosuccinate synthetase F6X00_05165 PF08238 Sel1 repeat F6X00_05170 PF00042 Globin F6X00_05170 PF00970 Oxidoreductase FAD-binding domain F6X00_05170 PF00175 Oxidoreductase NAD-binding domain F6X00_05175 PF02082 Transcriptional regulator F6X00_05180 PF01979 Amidohydrolase family F6X00_05185 PF00773 RNB domain F6X00_05185 PF08461 Ribonuclease R winged-helix domain F6X00_05185 PF00575 S1 RNA binding domain F6X00_05185 PF08206 Ribonuclease B OB domain F6X00_05185 PF17876 Cold shock domain F6X00_05190 PF00588 SpoU rRNA Methylase family F6X00_05190 PF08032 RNA 2'-O ribose methyltransferase substrate binding F6X00_05195 PF13419 Haloacid dehalogenase-like hydrolase F6X00_05200 PF00579 tRNA synthetases class I (W and Y) F6X00_05215 PF00117 Glutamine amidotransferase class-I F6X00_05220 PF00202 Aminotransferase class-III F6X00_05225 PF04958 Arginine N-succinyltransferase beta subunit F6X00_05230 PF00171 Aldehyde dehydrogenase family F6X00_05240 PF13545 Crp-like helix-turn-helix domain F6X00_05240 PF00027 Cyclic nucleotide-binding domain F6X00_05245 PF00485 Phosphoribulokinase / Uridine kinase family F6X00_05250 PF06794 Uncharacterised protein family (UPF0270) F6X00_05255 PF00561 alpha/beta hydrolase fold F6X00_05265 PF12848 ABC transporter F6X00_05265 PF00005 ABC transporter F6X00_05270 PF02525 Flavodoxin-like fold F6X00_05275 PF00999 Sodium/hydrogen exchanger family F6X00_05275 PF02254 TrkA-N domain F6X00_05285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_05290 PF01112 Asparaginase F6X00_05295 PF04102 SlyX F6X00_05305 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F6X00_05305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_05310 PF08348 YheO-like PAS domain F6X00_05310 PF13309 HTH domain F6X00_05315 PF02635 DsrE/DsrF-like family F6X00_05320 PF02635 DsrE/DsrF-like family F6X00_05325 PF04077 DsrH like protein F6X00_05330 PF00164 Ribosomal protein S12/S23 F6X00_05335 PF00177 Ribosomal protein S7p/S5e F6X00_05340 PF14492 Elongation Factor G, domain II F6X00_05340 PF03764 Elongation factor G, domain IV F6X00_05340 PF00009 Elongation factor Tu GTP binding domain F6X00_05340 PF00679 Elongation factor G C-terminus F6X00_05340 PF03144 Elongation factor Tu domain 2 F6X00_05345 PF03143 Elongation factor Tu C-terminal domain F6X00_05345 PF03144 Elongation factor Tu domain 2 F6X00_05345 PF00009 Elongation factor Tu GTP binding domain F6X00_05350 PF04324 BFD-like [2Fe-2S] binding domain F6X00_05355 PF00210 Ferritin-like domain F6X00_05360 PF16363 GDP-mannose 4,6 dehydratase F6X00_05365 PF00121 Triosephosphate isomerase F6X00_05390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F6X00_05395 PF06005 Cell division protein ZapB F6X00_05400 PF03737 Aldolase/RraA F6X00_05405 PF01040 UbiA prenyltransferase family F6X00_05410 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_05410 PF07724 AAA domain (Cdc48 subfamily) F6X00_05410 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_05415 PF00227 Proteasome subunit F6X00_05425 PF00356 Bacterial regulatory proteins, lacI family F6X00_05430 PF00271 Helicase conserved C-terminal domain F6X00_05430 PF00270 DEAD/DEAH box helicase F6X00_05430 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F6X00_05430 PF18074 Primosomal protein N C-terminal domain F6X00_05430 PF17764 3′ DNA-binding domain (3′BD) F6X00_05435 PF01197 Ribosomal protein L31 F6X00_05440 PF03949 Malic enzyme, NAD binding domain F6X00_05440 PF00390 Malic enzyme, N-terminal domain F6X00_05445 PF01340 Met Apo-repressor, MetJ F6X00_05450 PF01053 Cys/Met metabolism PLP-dependent enzyme F6X00_05455 PF03447 Homoserine dehydrogenase, NAD binding domain F6X00_05455 PF00742 Homoserine dehydrogenase F6X00_05455 PF00696 Amino acid kinase family F6X00_05460 PF02219 Methylenetetrahydrofolate reductase F6X00_05470 PF00311 Phosphoenolpyruvate carboxylase F6X00_05475 PF07687 Peptidase dimerisation domain F6X00_05475 PF01546 Peptidase family M20/M25/M40 F6X00_05480 PF01118 Semialdehyde dehydrogenase, NAD binding domain F6X00_05480 PF02774 Semialdehyde dehydrogenase, dimerisation domain F6X00_05485 PF00696 Amino acid kinase family F6X00_05490 PF00764 Arginosuccinate synthase F6X00_05495 PF14698 Argininosuccinate lyase C-terminal F6X00_05495 PF00206 Lyase F6X00_05495 PF00583 Acetyltransferase (GNAT) family F6X00_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_05505 PF03466 LysR substrate binding domain F6X00_05510 PF17092 Penicillin-binding protein OB-like domain F6X00_05510 PF00912 Transglycosylase F6X00_05510 PF00905 Penicillin binding protein transpeptidase domain F6X00_05535 PF11741 AMIN domain F6X00_05535 PF00263 Bacterial type II and III secretion system protein F6X00_05535 PF03958 Bacterial type II/III secretion system short domain F6X00_05535 PF07660 Secretin and TonB N terminus short domain F6X00_05540 PF01202 Shikimate kinase F6X00_05545 PF01761 3-dehydroquinate synthase F6X00_05555 PF02086 D12 class N6 adenine-specific DNA methyltransferase F6X00_05560 PF00834 Ribulose-phosphate 3 epimerase family F6X00_05565 PF01250 Ribosomal protein S6 F6X00_05570 PF00436 Single-strand binding protein family F6X00_05575 PF01084 Ribosomal protein S18 F6X00_05580 PF03948 Ribosomal protein L9, C-terminal domain F6X00_05580 PF01281 Ribosomal protein L9, N-terminal domain F6X00_05590 PF00772 DnaB-like helicase N terminal domain F6X00_05590 PF03796 DnaB-like helicase C terminal domain F6X00_05595 PF01168 Alanine racemase, N-terminal domain F6X00_05595 PF00842 Alanine racemase, C-terminal domain F6X00_05635 PF12161 HsdM N-terminal domain F6X00_05635 PF02384 N-6 DNA Methylase F6X00_05650 PF02151 UvrB/uvrC motif F6X00_05650 PF17757 UvrB interaction domain F6X00_05650 PF12344 Ultra-violet resistance protein B F6X00_05650 PF00271 Helicase conserved C-terminal domain F6X00_05650 PF04851 Type III restriction enzyme, res subunit F6X00_05665 PF18766 SWI2/SNF2 ATPase F6X00_05665 PF11867 Domain of unknown function (DUF3387) F6X00_05665 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F6X00_05675 PF01381 Helix-turn-helix F6X00_05690 PF00342 Phosphoglucose isomerase F6X00_05700 PF01475 Ferric uptake regulator family F6X00_05705 PF01207 Dihydrouridine synthase (Dus) F6X00_05725 PF00175 Oxidoreductase NAD-binding domain F6X00_05725 PF00667 FAD binding domain F6X00_05725 PF00258 Flavodoxin F6X00_05730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F6X00_05730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F6X00_05735 PF01507 Phosphoadenosine phosphosulfate reductase family F6X00_05800 PF00990 Diguanylate cyclase, GGDEF domain F6X00_05800 PF00072 Response regulator receiver domain F6X00_05805 PF00999 Sodium/hydrogen exchanger family F6X00_05810 PF02574 Homocysteine S-methyltransferase F6X00_05810 PF02965 Vitamin B12 dependent methionine synthase, activation domain F6X00_05810 PF02607 B12 binding domain F6X00_05810 PF00809 Pterin binding enzyme F6X00_05810 PF02310 B12 binding domain F6X00_05815 PF01842 ACT domain F6X00_05815 PF00696 Amino acid kinase family F6X00_05825 PF00266 Aminotransferase class-V F6X00_05835 PF00005 ABC transporter F6X00_05835 PF17755 UvrA DNA-binding domain F6X00_05835 PF17760 UvrA interaction domain F6X00_05840 PF00483 Nucleotidyl transferase F6X00_05845 PF00196 Bacterial regulatory proteins, luxR family F6X00_05850 PF00436 Single-strand binding protein family F6X00_05855 PF17157 Gammaproteobacterial periplasmic sensor domain F6X00_05855 PF00563 EAL domain F6X00_05855 PF00990 Diguanylate cyclase, GGDEF domain F6X00_05875 PF07660 Secretin and TonB N terminus short domain F6X00_05875 PF03958 Bacterial type II/III secretion system short domain F6X00_05875 PF00263 Bacterial type II and III secretion system protein F6X00_05875 PF11741 AMIN domain F6X00_05880 PF13401 AAA domain F6X00_05880 PF01471 Putative peptidoglycan binding domain F6X00_05890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F6X00_05890 PF00437 Type II/IV secretion system protein F6X00_05895 PF00482 Type II secretion system (T2SS), protein F F6X00_05905 PF07963 Prokaryotic N-terminal methylation motif F6X00_05905 PF00114 Pilin (bacterial filament) F6X00_05910 PF00114 Pilin (bacterial filament) F6X00_05910 PF07963 Prokaryotic N-terminal methylation motif F6X00_05945 PF04085 rod shape-determining protein MreC F6X00_05950 PF04093 rod shape-determining protein MreD F6X00_05955 PF02545 Maf-like protein F6X00_05960 PF00575 S1 RNA binding domain F6X00_05960 PF10150 Ribonuclease E/G family F6X00_05965 PF13502 AsmA-like C-terminal region F6X00_05965 PF13116 Protein of unknown function F6X00_05970 PF00795 Carbon-nitrogen hydrolase F6X00_05975 PF01523 Putative modulator of DNA gyrase F6X00_05980 PF02562 PhoH-like protein F6X00_05980 PF13638 PIN domain F6X00_05985 PF00271 Helicase conserved C-terminal domain F6X00_05985 PF12137 RNA polymerase recycling family C-terminal F6X00_05985 PF00176 SNF2 family N-terminal domain F6X00_05985 PF18337 RapA N-terminal Tudor like domain F6X00_05985 PF18339 RapA N-terminal Tudor like domain 1 F6X00_05990 PF00849 RNA pseudouridylate synthase F6X00_05995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_05995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_06000 PF01042 Endoribonuclease L-PSP F6X00_06005 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F6X00_06005 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F6X00_06010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F6X00_06010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F6X00_06015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F6X00_06015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F6X00_06025 PF06877 Regulator of ribonuclease activity B F6X00_06110 PF00583 Acetyltransferase (GNAT) family F6X00_06120 PF05987 Bacterial protein of unknown function (DUF898) F6X00_06130 PF10458 Valyl tRNA synthetase tRNA binding arm F6X00_06130 PF00133 tRNA synthetases class I (I, L, M and V) F6X00_06130 PF08264 Anticodon-binding domain of tRNA F6X00_06135 PF04364 DNA polymerase III chi subunit, HolC F6X00_06140 PF00883 Cytosol aminopeptidase family, catalytic domain F6X00_06140 PF02789 Cytosol aminopeptidase family, N-terminal domain F6X00_06145 PF03739 Lipopolysaccharide export system permease LptF/LptG F6X00_06150 PF03739 Lipopolysaccharide export system permease LptF/LptG F6X00_06165 PF01522 Polysaccharide deacetylase F6X00_06170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F6X00_06175 PF02378 Phosphotransferase system, EIIC F6X00_06180 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F6X00_06185 PF02056 Family 4 glycosyl hydrolase F6X00_06185 PF11975 Family 4 glycosyl hydrolase C-terminal domain F6X00_06190 PF04794 YdjC-like protein F6X00_06195 PF00356 Bacterial regulatory proteins, lacI family F6X00_06205 PF00072 Response regulator receiver domain F6X00_06295 PF17200 Single Cache domain 2 F6X00_06295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_06295 PF00672 HAMP domain F6X00_06315 PF01464 Transglycosylase SLT domain F6X00_06315 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F6X00_06320 PF04362 Bacterial Fe(2+) trafficking F6X00_06325 PF00633 Helix-hairpin-helix motif F6X00_06325 PF14815 NUDIX domain F6X00_06325 PF00730 HhH-GPD superfamily base excision DNA repair protein F6X00_06330 PF02390 Putative methyltransferase F6X00_06335 PF04960 Glutaminase F6X00_06345 PF06969 HemN C-terminal domain F6X00_06345 PF04055 Radical SAM superfamily F6X00_06350 PF01725 Ham1 family F6X00_06360 PF02594 Uncharacterised ACR, YggU family COG1872 F6X00_06365 PF02325 YGGT family F6X00_06370 PF14748 Pyrroline-5-carboxylate reductase dimerisation F6X00_06370 PF03807 NADP oxidoreductase coenzyme F420-dependent F6X00_06375 PF01168 Alanine racemase, N-terminal domain F6X00_06380 PF00437 Type II/IV secretion system protein F6X00_06385 PF00437 Type II/IV secretion system protein F6X00_06390 PF03652 Holliday junction resolvase F6X00_06395 PF02622 Uncharacterized ACR, COG1678 F6X00_06400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F6X00_06400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F6X00_06405 PF04452 RNA methyltransferase F6X00_06415 PF04231 Endonuclease I F6X00_06420 PF10263 SprT-like family F6X00_06420 PF17283 SprT-like zinc ribbon domain F6X00_06430 PF02773 S-adenosylmethionine synthetase, C-terminal domain F6X00_06430 PF00438 S-adenosylmethionine synthetase, N-terminal domain F6X00_06430 PF02772 S-adenosylmethionine synthetase, central domain F6X00_06435 PF00456 Transketolase, thiamine diphosphate binding domain F6X00_06435 PF02779 Transketolase, pyrimidine binding domain F6X00_06435 PF02780 Transketolase, C-terminal domain F6X00_06445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F6X00_06445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F6X00_06450 PF00162 Phosphoglycerate kinase F6X00_06455 PF01116 Fructose-bisphosphate aldolase class-II F6X00_06460 PF05552 Conserved TM helix F6X00_06460 PF00924 Mechanosensitive ion channel F6X00_06465 PF01810 LysE type translocator F6X00_06470 PF03466 LysR substrate binding domain F6X00_06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_06480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_06480 PF01842 ACT domain F6X00_06480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_06485 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F6X00_06490 PF01812 5-formyltetrahydrofolate cyclo-ligase family F6X00_06500 PF05164 Cell division protein ZapA F6X00_06505 PF03695 Uncharacterised protein family (UPF0149) F6X00_06510 PF01494 FAD binding domain F6X00_06515 PF01494 FAD binding domain F6X00_06530 PF01571 Aminomethyltransferase folate-binding domain F6X00_06535 PF03937 Flavinator of succinate dehydrogenase F6X00_06545 PF02910 Fumarate reductase flavoprotein C-term F6X00_06545 PF00890 FAD binding domain F6X00_06550 PF08281 Sigma-70, region 4 F6X00_06550 PF04542 Sigma-70 region 2 F6X00_06555 PF03872 Anti sigma-E protein RseA, N-terminal domain F6X00_06555 PF03873 Anti sigma-E protein RseA, C-terminal domain F6X00_06560 PF17188 MucB/RseB C-terminal domain F6X00_06560 PF03888 MucB/RseB N-terminal domain F6X00_06570 PF00679 Elongation factor G C-terminus F6X00_06570 PF06421 GTP-binding protein LepA C-terminus F6X00_06570 PF03144 Elongation factor Tu domain 2 F6X00_06570 PF00009 Elongation factor Tu GTP binding domain F6X00_06575 PF10502 Signal peptidase, peptidase S26 F6X00_06580 PF00035 Double-stranded RNA binding motif F6X00_06580 PF14622 Ribonuclease-III-like F6X00_06585 PF07650 KH domain F6X00_06585 PF01926 50S ribosome-binding GTPase F6X00_06590 PF02565 Recombination protein O C terminal F6X00_06590 PF11967 Recombination protein O N terminal F6X00_06595 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F6X00_06600 PF01648 4'-phosphopantetheinyl transferase superfamily F6X00_06615 PF00990 Diguanylate cyclase, GGDEF domain F6X00_06615 PF00563 EAL domain F6X00_06615 PF03707 Bacterial signalling protein N terminal repeat F6X00_06620 PF00672 HAMP domain F6X00_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_06620 PF00512 His Kinase A (phospho-acceptor) domain F6X00_06620 PF01627 Hpt domain F6X00_06620 PF00072 Response regulator receiver domain F6X00_06620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_06625 PF01938 TRAM domain F6X00_06625 PF05958 tRNA (Uracil-5-)-methyltransferase F6X00_06630 PF13291 ACT domain F6X00_06630 PF04607 Region found in RelA / SpoT proteins F6X00_06630 PF02824 TGS domain F6X00_06635 PF03819 MazG nucleotide pyrophosphohydrolase domain F6X00_06640 PF06418 CTP synthase N-terminus F6X00_06640 PF00117 Glutamine amidotransferase class-I F6X00_06645 PF03952 Enolase, N-terminal domain F6X00_06645 PF00113 Enolase, C-terminal TIM barrel domain F6X00_06650 PF04977 Septum formation initiator F6X00_06655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F6X00_06660 PF02542 YgbB family F6X00_06665 PF01142 tRNA pseudouridine synthase D (TruD) F6X00_06670 PF01975 Survival protein SurE F6X00_06680 PF01476 LysM domain F6X00_06680 PF01551 Peptidase family M23 F6X00_06685 PF04542 Sigma-70 region 2 F6X00_06685 PF04539 Sigma-70 region 3 F6X00_06685 PF04545 Sigma-70, region 4 F6X00_06685 PF00140 Sigma-70 factor, region 1.2 F6X00_06690 PF05188 MutS domain II F6X00_06690 PF05192 MutS domain III F6X00_06690 PF05190 MutS family domain IV F6X00_06690 PF01624 MutS domain I F6X00_06690 PF00488 MutS domain V F6X00_06695 PF02464 Competence-damaged protein F6X00_06700 PF00154 recA bacterial DNA recombination protein F6X00_06705 PF02631 RecX family F6X00_06710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F6X00_06710 PF01411 tRNA synthetases class II (A) F6X00_06710 PF02272 DHHA1 domain F6X00_06715 PF01842 ACT domain F6X00_06715 PF00696 Amino acid kinase family F6X00_06715 PF13840 ACT domain F6X00_06720 PF02599 Global regulator protein family F6X00_06765 PF04277 Oxaloacetate decarboxylase, gamma chain F6X00_06770 PF02436 Conserved carboxylase domain F6X00_06770 PF00364 Biotin-requiring enzyme F6X00_06770 PF00682 HMGL-like F6X00_06775 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F6X00_06780 PF08240 Alcohol dehydrogenase GroES-like domain F6X00_06780 PF00107 Zinc-binding dehydrogenase F6X00_06785 PF09335 SNARE associated Golgi protein F6X00_06790 PF00675 Insulinase (Peptidase family M16) F6X00_06790 PF05193 Peptidase M16 inactive domain F6X00_06795 PF04262 Glutamate-cysteine ligase F6X00_06805 PF02664 S-Ribosylhomocysteinase (LuxS) F6X00_06810 PF00571 CBS domain F6X00_06810 PF01595 Cyclin M transmembrane N-terminal domain F6X00_06810 PF03471 Transporter associated domain F6X00_06815 PF01578 Cytochrome C assembly protein F6X00_06820 PF00448 SRP54-type protein, GTPase domain F6X00_06820 PF02978 Signal peptide binding domain F6X00_06820 PF02881 SRP54-type protein, helical bundle domain F6X00_06825 PF00886 Ribosomal protein S16 F6X00_06830 PF01782 RimM N-terminal domain F6X00_06830 PF05239 PRC-barrel domain F6X00_06835 PF01746 tRNA (Guanine-1)-methyltransferase F6X00_06840 PF01245 Ribosomal protein L19 F6X00_06845 PF03884 DNA gyrase inhibitor YacG F6X00_06850 PF07072 Cell division protein F6X00_06855 PF01121 Dephospho-CoA kinase F6X00_06860 PF06750 Bacterial Peptidase A24 N-terminal domain F6X00_06860 PF01478 Type IV leader peptidase family F6X00_06865 PF00482 Type II secretion system (T2SS), protein F F6X00_06870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F6X00_06870 PF00437 Type II/IV secretion system protein F6X00_06875 PF07963 Prokaryotic N-terminal methylation motif F6X00_06875 PF00114 Pilin (bacterial filament) F6X00_06880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F6X00_06880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F6X00_06885 PF01510 N-acetylmuramoyl-L-alanine amidase F6X00_06890 PF07729 FCD domain F6X00_06890 PF00392 Bacterial regulatory proteins, gntR family F6X00_06895 PF00456 Transketolase, thiamine diphosphate binding domain F6X00_06895 PF17831 Pyruvate dehydrogenase E1 component middle domain F6X00_06900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F6X00_06900 PF00364 Biotin-requiring enzyme F6X00_06900 PF02817 e3 binding domain F6X00_06905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F6X00_06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_06910 PF00440 Bacterial regulatory proteins, tetR family F6X00_06915 PF00156 Phosphoribosyl transferase domain F6X00_06920 PF00484 Carbonic anhydrase F6X00_06925 PF00916 Sulfate permease family F6X00_06925 PF01740 STAS domain F6X00_06930 PF00005 ABC transporter F6X00_06935 PF01061 ABC-2 type transporter F6X00_06940 PF02569 Pantoate-beta-alanine ligase F6X00_06945 PF02548 Ketopantoate hydroxymethyltransferase F6X00_06950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F6X00_06955 PF12626 Polymerase A arginine-rich C-terminus F6X00_06955 PF01743 Poly A polymerase head domain F6X00_06955 PF12627 Probable RNA and SrmB- binding site of polymerase A F6X00_06960 PF00749 tRNA synthetases class I (E and Q), catalytic domain F6X00_06965 PF01258 Prokaryotic dksA/traR C4-type zinc finger F6X00_06970 PF17746 SfsA N-terminal OB domain F6X00_06970 PF03749 Sugar fermentation stimulation protein RE domain F6X00_06975 PF00271 Helicase conserved C-terminal domain F6X00_06975 PF04408 Helicase associated domain (HA2) F6X00_06975 PF00270 DEAD/DEAH box helicase F6X00_06975 PF08482 ATP-dependent helicase C-terminal F6X00_06980 PF00905 Penicillin binding protein transpeptidase domain F6X00_06980 PF14814 Bifunctional transglycosylase second domain F6X00_06980 PF00912 Transglycosylase F6X00_06985 PF01734 Patatin-like phospholipase F6X00_06990 PF00330 Aconitase family (aconitate hydratase) F6X00_06990 PF06434 Aconitate hydratase 2 N-terminus F6X00_06990 PF11791 Aconitate B N-terminal domain F6X00_06995 PF02595 Glycerate kinase family F6X00_07000 PF02447 GntP family permease F6X00_07005 PF17853 GGDEF-like domain F6X00_07005 PF13556 PucR C-terminal helix-turn-helix domain F6X00_07005 PF05651 Putative sugar diacid recognition F6X00_07010 PF06062 Uncharacterised protein family (UPF0231) F6X00_07015 PF00543 Nitrogen regulatory protein P-II F6X00_07020 PF00909 Ammonium Transporter Family F6X00_07025 PF13416 Bacterial extracellular solute-binding protein F6X00_07035 PF00005 ABC transporter F6X00_07035 PF08402 TOBE domain F6X00_07040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F6X00_07040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F6X00_07040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F6X00_07040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F6X00_07045 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain F6X00_07045 PF06165 Glycosyltransferase family 36 F6X00_07050 PF00728 Glycosyl hydrolase family 20, catalytic domain F6X00_07050 PF02838 Glycosyl hydrolase family 20, domain 2 F6X00_07055 PF01869 BadF/BadG/BcrA/BcrD ATPase family F6X00_07065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_07065 PF00005 ABC transporter F6X00_07070 PF00005 ABC transporter F6X00_07070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_07075 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_07075 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_07080 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_07085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_07090 PF00072 Response regulator receiver domain F6X00_07090 PF09308 LuxQ, periplasmic F6X00_07090 PF00512 His Kinase A (phospho-acceptor) domain F6X00_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_07095 PF05175 Methyltransferase small domain F6X00_07095 PF08468 Methyltransferase small domain N-terminal F6X00_07100 PF01594 AI-2E family transporter F6X00_07105 PF00202 Aminotransferase class-III F6X00_07110 PF01521 Iron-sulphur cluster biosynthesis F6X00_07115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_07120 PF00873 AcrB/AcrD/AcrF family F6X00_07125 PF04225 Opacity-associated protein A LysM-like domain F6X00_07125 PF01551 Peptidase family M23 F6X00_07130 PF00579 tRNA synthetases class I (W and Y) F6X00_07135 PF04304 Protein of unknown function (DUF454) F6X00_07140 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F6X00_07145 PF13609 Gram-negative porin F6X00_07150 PF03449 Transcription elongation factor, N-terminal F6X00_07150 PF01272 Transcription elongation factor, GreA/GreB, C-term F6X00_07155 PF01985 CRS1 / YhbY (CRM) domain F6X00_07160 PF01728 FtsJ-like methyltransferase F6X00_07165 PF17862 AAA+ lid domain F6X00_07165 PF06480 FtsH Extracellular F6X00_07165 PF01434 Peptidase family M41 F6X00_07165 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_07170 PF00809 Pterin binding enzyme F6X00_07175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F6X00_07175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F6X00_07175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F6X00_07175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F6X00_07180 PF03840 Preprotein translocase SecG subunit F6X00_07195 PF17384 RimP C-terminal SH3 domain F6X00_07195 PF02576 RimP N-terminal domain F6X00_07200 PF00575 S1 RNA binding domain F6X00_07200 PF13184 NusA-like KH domain F6X00_07200 PF08529 NusA N-terminal domain F6X00_07205 PF08364 Bacterial translation initiation factor IF-2 associated region F6X00_07205 PF04760 Translation initiation factor IF-2, N-terminal region F6X00_07205 PF11987 Translation-initiation factor 2 F6X00_07205 PF00009 Elongation factor Tu GTP binding domain F6X00_07210 PF02033 Ribosome-binding factor A F6X00_07215 PF16198 tRNA pseudouridylate synthase B C-terminal domain F6X00_07215 PF09157 Pseudouridine synthase II TruB, C-terminal F6X00_07215 PF01509 TruB family pseudouridylate synthase (N terminal domain) F6X00_07220 PF00312 Ribosomal protein S15 F6X00_07260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F6X00_07260 PF03725 3' exoribonuclease family, domain 2 F6X00_07260 PF00013 KH domain F6X00_07260 PF01138 3' exoribonuclease family, domain 1 F6X00_07260 PF00575 S1 RNA binding domain F6X00_07265 PF07719 Tetratricopeptide repeat F6X00_07265 PF13181 Tetratricopeptide repeat F6X00_07275 PF01554 MatE F6X00_07280 PF01136 Peptidase family U32 F6X00_07285 PF01136 Peptidase family U32 F6X00_07290 PF00990 Diguanylate cyclase, GGDEF domain F6X00_07290 PF03707 Bacterial signalling protein N terminal repeat F6X00_07290 PF00563 EAL domain F6X00_07295 PF02036 SCP-2 sterol transfer family F6X00_07300 PF13508 Acetyltransferase (GNAT) domain F6X00_07310 PF00583 Acetyltransferase (GNAT) family F6X00_07315 PF00563 EAL domain F6X00_07315 PF03707 Bacterial signalling protein N terminal repeat F6X00_07315 PF00990 Diguanylate cyclase, GGDEF domain F6X00_07320 PF08448 PAS fold F6X00_07320 PF00990 Diguanylate cyclase, GGDEF domain F6X00_07325 PF16658 Class II release factor RF3, C-terminal domain F6X00_07325 PF03144 Elongation factor Tu domain 2 F6X00_07325 PF00009 Elongation factor Tu GTP binding domain F6X00_07330 PF01026 TatD related DNase F6X00_07335 PF01773 Na+ dependent nucleoside transporter N-terminus F6X00_07335 PF07670 Nucleoside recognition F6X00_07335 PF07662 Na+ dependent nucleoside transporter C-terminus F6X00_07340 PF01791 DeoC/LacD family aldolase F6X00_07345 PF02885 Glycosyl transferase family, helical bundle domain F6X00_07345 PF00591 Glycosyl transferase family, a/b domain F6X00_07345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F6X00_07350 PF01676 Metalloenzyme superfamily F6X00_07355 PF01048 Phosphorylase superfamily F6X00_07365 PF18429 Domain of unknown function (DUF5609) F6X00_07375 PF18073 Rubredoxin metal binding domain F6X00_07380 PF13426 PAS domain F6X00_07380 PF08448 PAS fold F6X00_07380 PF08447 PAS fold F6X00_07380 PF05231 MASE1 F6X00_07380 PF00990 Diguanylate cyclase, GGDEF domain F6X00_07380 PF00563 EAL domain F6X00_07395 PF03144 Elongation factor Tu domain 2 F6X00_07395 PF03764 Elongation factor G, domain IV F6X00_07395 PF14492 Elongation Factor G, domain II F6X00_07395 PF00679 Elongation factor G C-terminus F6X00_07395 PF00009 Elongation factor Tu GTP binding domain F6X00_07400 PF00501 AMP-binding enzyme F6X00_07405 PF02311 AraC-like ligand binding domain F6X00_07405 PF12833 Helix-turn-helix domain F6X00_07435 PF13629 Pilus formation protein N terminal region F6X00_07435 PF04972 BON domain F6X00_07435 PF00263 Bacterial type II and III secretion system protein F6X00_07465 PF00437 Type II/IV secretion system protein F6X00_07485 PF02417 Chromate transporter F6X00_07490 PF03466 LysR substrate binding domain F6X00_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_07500 PF01204 Trehalase F6X00_07505 PF13520 Amino acid permease F6X00_07510 PF13520 Amino acid permease F6X00_07515 PF04074 YhcH/YjgK/YiaL F6X00_07520 PF02929 Beta galactosidase small chain F6X00_07520 PF16353 Domain of unknown function(DUF4981) F6X00_07520 PF00703 Glycosyl hydrolases family 2 F6X00_07520 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F6X00_07520 PF02837 Glycosyl hydrolases family 2, sugar binding domain F6X00_07530 PF00356 Bacterial regulatory proteins, lacI family F6X00_07535 PF16363 GDP-mannose 4,6 dehydratase F6X00_07540 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F6X00_07540 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F6X00_07545 PF00288 GHMP kinases N terminal domain F6X00_07545 PF10509 Galactokinase galactose-binding signature F6X00_07545 PF08544 GHMP kinases C terminal F6X00_07550 PF01263 Aldose 1-epimerase F6X00_07555 PF17200 Single Cache domain 2 F6X00_07555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_07555 PF00672 HAMP domain F6X00_07560 PF00356 Bacterial regulatory proteins, lacI family F6X00_07565 PF01588 Putative tRNA binding domain F6X00_07580 PF08443 RimK-like ATP-grasp domain F6X00_07580 PF18030 RimK PreATP-grasp domain F6X00_07580 PF02080 TrkA-C domain F6X00_07590 PF01544 CorA-like Mg2+ transporter protein F6X00_07595 PF01266 FAD dependent oxidoreductase F6X00_07595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F6X00_07600 PF00455 DeoR C terminal sensor domain F6X00_07600 PF08220 DeoR-like helix-turn-helix domain F6X00_07605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F6X00_07605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F6X00_07610 PF00230 Major intrinsic protein F6X00_07615 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle F6X00_07615 PF14602 Hexapeptide repeat of succinyl-transferase F6X00_07620 PF07130 YebG protein F6X00_07625 PF03466 LysR substrate binding domain F6X00_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_07635 PF00884 Sulfatase F6X00_07635 PF11893 Domain of unknown function (DUF3413) F6X00_07640 PF17946 RecC C-terminal domain F6X00_07645 PF13361 UvrD-like helicase C-terminal domain F6X00_07645 PF00580 UvrD/REP helicase N-terminal domain F6X00_07645 PF12705 PD-(D/E)XK nuclease superfamily F6X00_07650 PF13538 UvrD-like helicase C-terminal domain F6X00_07660 PF00583 Acetyltransferase (GNAT) family F6X00_07660 PF00696 Amino acid kinase family F6X00_07670 PF06725 3D domain F6X00_07670 PF03562 MltA specific insert domain F6X00_07675 PF00899 ThiF family F6X00_07680 PF02657 Fe-S metabolism associated domain F6X00_07685 PF00266 Aminotransferase class-V F6X00_07690 PF01965 DJ-1/PfpI family F6X00_07695 PF08546 Ketopantoate reductase PanE/ApbA C terminal F6X00_07695 PF02558 Ketopantoate reductase PanE/ApbA F6X00_07700 PF03502 Nucleoside-specific channel-forming protein, Tsx F6X00_07710 PF04545 Sigma-70, region 4 F6X00_07710 PF04542 Sigma-70 region 2 F6X00_07720 PF07690 Major Facilitator Superfamily F6X00_07725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F6X00_07735 PF05175 Methyltransferase small domain F6X00_07740 PF01722 BolA-like protein F6X00_07745 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F6X00_07745 PF11973 NQRA C-terminal domain F6X00_07750 PF03116 NQR2, RnfD, RnfE family F6X00_07755 PF04205 FMN-binding domain F6X00_07760 PF02508 Rnf-Nqr subunit, membrane protein F6X00_07765 PF02508 Rnf-Nqr subunit, membrane protein F6X00_07770 PF00970 Oxidoreductase FAD-binding domain F6X00_07770 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_07770 PF00175 Oxidoreductase NAD-binding domain F6X00_07775 PF02424 ApbE family F6X00_07785 PF00990 Diguanylate cyclase, GGDEF domain F6X00_07785 PF00072 Response regulator receiver domain F6X00_07795 PF00570 HRDC domain F6X00_07795 PF00271 Helicase conserved C-terminal domain F6X00_07795 PF09382 RQC domain F6X00_07795 PF16124 RecQ zinc-binding F6X00_07795 PF00270 DEAD/DEAH box helicase F6X00_07805 PF00041 Fibronectin type III domain F6X00_07805 PF00704 Glycosyl hydrolases family 18 F6X00_07810 PF00209 Sodium:neurotransmitter symporter family F6X00_07820 PF06786 Uncharacterised protein family (UPF0253) F6X00_07830 PF04073 Aminoacyl-tRNA editing domain F6X00_07830 PF03129 Anticodon binding domain F6X00_07830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F6X00_07835 PF18389 TrmO C-terminal domain F6X00_07835 PF01980 tRNA-methyltransferase O F6X00_07840 PF01197 Ribosomal protein L31 F6X00_07845 PF00444 Ribosomal protein L36 F6X00_07850 PF03806 AbgT putative transporter family F6X00_07855 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F6X00_07885 PF04287 tRNA pseudouridine synthase C F6X00_07890 PF00849 RNA pseudouridylate synthase F6X00_07895 PF11944 Protein of unknown function (DUF3461) F6X00_07900 PF01966 HD domain F6X00_07900 PF08335 GlnD PII-uridylyltransferase F6X00_07900 PF01909 Nucleotidyltransferase domain F6X00_07905 PF00557 Metallopeptidase family M24 F6X00_07910 PF00318 Ribosomal protein S2 F6X00_07915 PF00889 Elongation factor TS F6X00_07920 PF00696 Amino acid kinase family F6X00_07925 PF01765 Ribosome recycling factor F6X00_07930 PF01255 Putative undecaprenyl diphosphate synthase F6X00_07940 PF13288 DXP reductoisomerase C-terminal domain F6X00_07940 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F6X00_07940 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F6X00_07945 PF02163 Peptidase family M50 F6X00_07945 PF17820 PDZ domain F6X00_07950 PF01103 Surface antigen F6X00_07950 PF07244 Surface antigen variable number repeat F6X00_07955 PF03938 Outer membrane protein (OmpH-like) F6X00_07960 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F6X00_07960 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_07965 PF07977 FabA-like domain F6X00_07970 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_07970 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F6X00_07975 PF02684 Lipid-A-disaccharide synthetase F6X00_07980 PF01351 Ribonuclease HII F6X00_07985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F6X00_07985 PF14579 Helix-hairpin-helix motif F6X00_07985 PF02811 PHP domain F6X00_07985 PF01336 OB-fold nucleic acid binding domain F6X00_07985 PF07733 Bacterial DNA polymerase III alpha NTPase domain F6X00_07990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F6X00_07995 PF09179 TilS substrate binding domain F6X00_07995 PF01171 PP-loop family F6X00_07995 PF11734 TilS substrate C-terminal domain F6X00_08000 PF00034 Cytochrome c F6X00_08005 PF00543 Nitrogen regulatory protein P-II F6X00_08010 PF03372 Endonuclease/Exonuclease/phosphatase family F6X00_08020 PF01464 Transglycosylase SLT domain F6X00_08020 PF01476 LysM domain F6X00_08025 PF00753 Metallo-beta-lactamase superfamily F6X00_08025 PF16123 Hydroxyacylglutathione hydrolase C-terminus F6X00_08030 PF08241 Methyltransferase domain F6X00_08035 PF00075 RNase H F6X00_08040 PF00929 Exonuclease F6X00_08050 PF02525 Flavodoxin-like fold F6X00_08055 PF02254 TrkA-N domain F6X00_08055 PF00999 Sodium/hydrogen exchanger family F6X00_08070 PF09317 Domain of unknown function (DUF1974) F6X00_08070 PF02770 Acyl-CoA dehydrogenase, middle domain F6X00_08070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F6X00_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F6X00_08075 PF13580 SIS domain F6X00_08080 PF13230 Glutamine amidotransferases class-II F6X00_08085 PF00551 Formyl transferase F6X00_08090 PF02769 AIR synthase related protein, C-terminal domain F6X00_08090 PF00586 AIR synthase related protein, N-terminal domain F6X00_08100 PF00860 Permease family F6X00_08115 PF03358 NADPH-dependent FMN reductase F6X00_08120 PF03960 ArsC family F6X00_08125 PF13181 Tetratricopeptide repeat F6X00_08125 PF01435 Peptidase family M48 F6X00_08135 PF01594 AI-2E family transporter F6X00_08140 PF00578 AhpC/TSA family F6X00_08145 PF01842 ACT domain F6X00_08150 PF00701 Dihydrodipicolinate synthetase family F6X00_08170 PF01546 Peptidase family M20/M25/M40 F6X00_08170 PF07687 Peptidase dimerisation domain F6X00_08175 PF03960 ArsC family F6X00_08200 PF04261 Dyp-type peroxidase family F6X00_08205 PF00700 Bacterial flagellin C-terminal helical region F6X00_08205 PF00669 Bacterial flagellin N-terminal helical region F6X00_08205 PF07196 Flagellin hook IN motif F6X00_08210 PF00700 Bacterial flagellin C-terminal helical region F6X00_08210 PF07196 Flagellin hook IN motif F6X00_08210 PF00669 Bacterial flagellin N-terminal helical region F6X00_08215 PF00700 Bacterial flagellin C-terminal helical region F6X00_08215 PF07196 Flagellin hook IN motif F6X00_08215 PF00669 Bacterial flagellin N-terminal helical region F6X00_08220 PF03646 FlaG protein F6X00_08225 PF02465 Flagellar hook-associated protein 2 N-terminus F6X00_08225 PF07196 Flagellin hook IN motif F6X00_08225 PF07195 Flagellar hook-associated protein 2 C-terminus F6X00_08235 PF02561 Flagellar protein FliS F6X00_08240 PF02954 Bacterial regulatory protein, Fis family F6X00_08240 PF06490 Flagellar regulatory protein FleQ F6X00_08240 PF00158 Sigma-54 interaction domain F6X00_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_08245 PF00512 His Kinase A (phospho-acceptor) domain F6X00_08250 PF00072 Response regulator receiver domain F6X00_08250 PF02954 Bacterial regulatory protein, Fis family F6X00_08250 PF00158 Sigma-54 interaction domain F6X00_08255 PF02049 Flagellar hook-basal body complex protein FliE F6X00_08260 PF08345 Flagellar M-ring protein C-terminal F6X00_08260 PF01514 Secretory protein of YscJ/FliF family F6X00_08265 PF01706 FliG C-terminal domain F6X00_08265 PF14841 FliG middle domain F6X00_08265 PF14842 FliG N-terminal domain F6X00_08275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F6X00_08275 PF18269 T3SS EscN ATPase C-terminal domain F6X00_08295 PF02154 Flagellar motor switch protein FliM F6X00_08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F6X00_08300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F6X00_08305 PF04347 Flagellar biosynthesis protein, FliO F6X00_08310 PF00813 FliP family F6X00_08315 PF01313 Bacterial export proteins, family 3 F6X00_08320 PF01311 Bacterial export proteins, family 1 F6X00_08325 PF01312 FlhB HrpN YscU SpaS Family F6X00_08330 PF00771 FHIPEP family F6X00_08335 PF00448 SRP54-type protein, GTPase domain F6X00_08340 PF10609 NUBPL iron-transfer P-loop NTPase F6X00_08345 PF04539 Sigma-70 region 3 F6X00_08345 PF04545 Sigma-70, region 4 F6X00_08345 PF04542 Sigma-70 region 2 F6X00_08350 PF00072 Response regulator receiver domain F6X00_08355 PF04344 Chemotaxis phosphatase, CheZ F6X00_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_08360 PF00072 Response regulator receiver domain F6X00_08360 PF02895 Signal transducing histidine kinase, homodimeric domain F6X00_08360 PF01584 CheW-like domain F6X00_08360 PF01627 Hpt domain F6X00_08365 PF01339 CheB methylesterase F6X00_08365 PF00072 Response regulator receiver domain F6X00_08370 PF13614 AAA domain F6X00_08380 PF01584 CheW-like domain F6X00_08390 PF00005 ABC transporter F6X00_08395 PF03379 CcmB protein F6X00_08400 PF01578 Cytochrome C assembly protein F6X00_08405 PF04995 Heme exporter protein D (CcmD) F6X00_08410 PF03100 CcmE F6X00_08415 PF01578 Cytochrome C assembly protein F6X00_08415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F6X00_08420 PF08534 Redoxin F6X00_08425 PF03918 Cytochrome C biogenesis protein F6X00_08430 PF03918 Cytochrome C biogenesis protein F6X00_08435 PF04333 MlaA lipoprotein F6X00_08440 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F6X00_08445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F6X00_08455 PF04542 Sigma-70 region 2 F6X00_08455 PF08281 Sigma-70, region 4 F6X00_08460 PF00108 Thiolase, N-terminal domain F6X00_08460 PF02803 Thiolase, C-terminal domain F6X00_08465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F6X00_08465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F6X00_08465 PF00378 Enoyl-CoA hydratase/isomerase F6X00_08470 PF00675 Insulinase (Peptidase family M16) F6X00_08470 PF05193 Peptidase M16 inactive domain F6X00_08480 PF00300 Histidine phosphatase superfamily (branch 1) F6X00_08485 PF01713 Smr domain F6X00_08490 PF05175 Methyltransferase small domain F6X00_08495 PF01264 Chorismate synthase F6X00_08500 PF03458 UPF0126 domain F6X00_08505 PF04315 Elongation factor P hydroxylase F6X00_08510 PF08891 YfcL protein F6X00_08515 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F6X00_08515 PF01266 FAD dependent oxidoreductase F6X00_08520 PF00109 Beta-ketoacyl synthase, N-terminal domain F6X00_08520 PF02801 Beta-ketoacyl synthase, C-terminal domain F6X00_08525 PF11890 Domain of unknown function (DUF3410) F6X00_08525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_08525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_08530 PF02774 Semialdehyde dehydrogenase, dimerisation domain F6X00_08530 PF01118 Semialdehyde dehydrogenase, NAD binding domain F6X00_08540 PF01416 tRNA pseudouridine synthase F6X00_08545 PF01039 Carboxyl transferase domain F6X00_08545 PF17848 Acetyl-coA carboxylase zinc finger domain F6X00_08550 PF02875 Mur ligase family, glutamate ligase domain F6X00_08550 PF08245 Mur ligase middle domain F6X00_08555 PF05036 Sporulation related domain F6X00_08560 PF02674 Colicin V production protein F6X00_08565 PF00156 Phosphoribosyl transferase domain F6X00_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_08570 PF03466 LysR substrate binding domain F6X00_08575 PF00072 Response regulator receiver domain F6X00_08585 PF04304 Protein of unknown function (DUF454) F6X00_08590 PF00156 Phosphoribosyl transferase domain F6X00_08595 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F6X00_08595 PF12170 DNA polymerase III tau subunit V interacting with alpha F6X00_08595 PF12169 DNA polymerase III subunits gamma and tau domain III F6X00_08600 PF02575 YbaB/EbfC DNA-binding family F6X00_08605 PF02132 RecR protein F6X00_08605 PF13662 Toprim domain F6X00_08620 PF00512 His Kinase A (phospho-acceptor) domain F6X00_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_08620 PF00672 HAMP domain F6X00_08625 PF00486 Transcriptional regulatory protein, C terminal F6X00_08625 PF00072 Response regulator receiver domain F6X00_08630 PF00230 Major intrinsic protein F6X00_08635 PF03692 Putative zinc- or iron-chelating domain F6X00_08640 PF03692 Putative zinc- or iron-chelating domain F6X00_08650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_08660 PF00245 Alkaline phosphatase F6X00_08675 PF13847 Methyltransferase domain F6X00_08680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F6X00_08680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F6X00_08690 PF00571 CBS domain F6X00_08690 PF01769 Divalent cation transporter F6X00_08690 PF03448 MgtE intracellular N domain F6X00_08695 PF00990 Diguanylate cyclase, GGDEF domain F6X00_08705 PF02743 Cache domain F6X00_08705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_08705 PF00672 HAMP domain F6X00_08710 PF00486 Transcriptional regulatory protein, C terminal F6X00_08710 PF18500 CadC C-terminal domain 1 F6X00_08715 PF13520 Amino acid permease F6X00_08720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F6X00_08720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F6X00_08720 PF01276 Orn/Lys/Arg decarboxylase, major domain F6X00_08725 PF00990 Diguanylate cyclase, GGDEF domain F6X00_08730 PF01743 Poly A polymerase head domain F6X00_08730 PF00571 CBS domain F6X00_08735 PF00403 Heavy-metal-associated domain F6X00_08740 PF01048 Phosphorylase superfamily F6X00_08750 PF00672 HAMP domain F6X00_08750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_08755 PF01230 HIT domain F6X00_08770 PF13036 Peptidoglycan-synthase activator LpoB F6X00_08770 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F6X00_08780 PF05728 Uncharacterised protein family (UPF0227) F6X00_08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_08800 PF17757 UvrB interaction domain F6X00_08800 PF00271 Helicase conserved C-terminal domain F6X00_08800 PF03461 TRCF domain F6X00_08800 PF00270 DEAD/DEAH box helicase F6X00_08800 PF02559 CarD-like/TRCF domain F6X00_08810 PF12704 MacB-like periplasmic core domain F6X00_08810 PF02687 FtsX-like permease family F6X00_08815 PF00005 ABC transporter F6X00_08820 PF12704 MacB-like periplasmic core domain F6X00_08820 PF02687 FtsX-like permease family F6X00_08830 PF13567 Domain of unknown function (DUF4131) F6X00_08830 PF00753 Metallo-beta-lactamase superfamily F6X00_08830 PF03772 Competence protein F6X00_08835 PF00005 ABC transporter F6X00_08835 PF00664 ABC transporter transmembrane region F6X00_08840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F6X00_08845 PF03966 Trm112p-like protein F6X00_08850 PF02348 Cytidylyltransferase F6X00_08855 PF00990 Diguanylate cyclase, GGDEF domain F6X00_08855 PF17155 Gammaproteobacterial periplasmic sensor domain F6X00_08860 PF04293 SpoVR like protein F6X00_08865 PF04285 Protein of unknown function (DUF444) F6X00_08870 PF08298 PrkA AAA domain F6X00_08870 PF06798 PrkA serine protein kinase C-terminal domain F6X00_08875 PF06629 MltA-interacting protein MipA F6X00_08880 PF03887 YfbU domain F6X00_08890 PF04055 Radical SAM superfamily F6X00_08895 PF00672 HAMP domain F6X00_08895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_08905 PF02901 Pyruvate formate lyase-like F6X00_08905 PF01228 Glycine radical F6X00_08920 PF00005 ABC transporter F6X00_08925 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_08930 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_08935 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_08945 PF03372 Endonuclease/Exonuclease/phosphatase family F6X00_08985 PF06892 Phage regulatory protein CII (CP76) F6X00_09025 PF05840 Bacteriophage replication gene A protein (GPA) F6X00_09190 PF00672 HAMP domain F6X00_09190 PF02743 Cache domain F6X00_09190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_09195 PF10689 Protein of unknown function (DUF2496) F6X00_09200 PF07445 Primosomal replication protein priC F6X00_09205 PF01925 Sulfite exporter TauE/SafE F6X00_09210 PF06733 DEAD_2 F6X00_09210 PF13307 Helicase C-terminal domain F6X00_09215 PF13609 Gram-negative porin F6X00_09220 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F6X00_09225 PF00849 RNA pseudouridylate synthase F6X00_09230 PF03971 Monomeric isocitrate dehydrogenase F6X00_09235 PF00313 'Cold-shock' DNA-binding domain F6X00_09240 PF02617 ATP-dependent Clp protease adaptor protein ClpS F6X00_09245 PF17871 AAA lid domain F6X00_09245 PF07724 AAA domain (Cdc48 subfamily) F6X00_09245 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_09245 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_09245 PF02861 Clp amino terminal domain, pathogenicity island component F6X00_09250 PF01176 Translation initiation factor 1A / IF-1 F6X00_09255 PF04377 Arginine-tRNA-protein transferase, C terminus F6X00_09255 PF04376 Arginine-tRNA-protein transferase, N terminus F6X00_09260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F6X00_09270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F6X00_09275 PF10692 Protein of unknown function (DUF2498) F6X00_09280 PF01396 Topoisomerase DNA binding C4 zinc finger F6X00_09280 PF01751 Toprim domain F6X00_09280 PF08272 Topoisomerase I zinc-ribbon-like F6X00_09280 PF01131 DNA topoisomerase F6X00_09290 PF00483 Nucleotidyl transferase F6X00_09295 PF08323 Starch synthase catalytic domain F6X00_09295 PF00534 Glycosyl transferases group 1 F6X00_09300 PF00561 alpha/beta hydrolase fold F6X00_09315 PF04994 TfoX C-terminal domain F6X00_09315 PF04993 TfoX N-terminal domain F6X00_09320 PF00356 Bacterial regulatory proteins, lacI family F6X00_09325 PF02613 Nitrate reductase delta subunit F6X00_09330 PF00486 Transcriptional regulatory protein, C terminal F6X00_09330 PF00072 Response regulator receiver domain F6X00_09335 PF02698 DUF218 domain F6X00_09340 PF13847 Methyltransferase domain F6X00_09345 PF17193 MukF C-terminal domain F6X00_09345 PF17192 MukF middle domain F6X00_09345 PF03882 MukF winged-helix domain F6X00_09350 PF04288 MukE-like family F6X00_09355 PF16330 MukB hinge domain F6X00_09355 PF04310 MukB N-terminal F6X00_09360 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F6X00_09360 PF12833 Helix-turn-helix domain F6X00_09365 PF00171 Aldehyde dehydrogenase family F6X00_09370 PF00732 GMC oxidoreductase F6X00_09370 PF05199 GMC oxidoreductase F6X00_09385 PF08443 RimK-like ATP-grasp domain F6X00_09385 PF18030 RimK PreATP-grasp domain F6X00_09390 PF08003 Protein of unknown function (DUF1698) F6X00_09395 PF13649 Methyltransferase domain F6X00_09405 PF01336 OB-fold nucleic acid binding domain F6X00_09405 PF00152 tRNA synthetases class II (D, K and N) F6X00_09405 PF02938 GAD domain F6X00_09410 PF02075 Crossover junction endodeoxyribonuclease RuvC F6X00_09415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_09415 PF00672 HAMP domain F6X00_09415 PF02203 Tar ligand binding domain homologue F6X00_09420 PF07499 RuvA, C-terminal domain F6X00_09420 PF01330 RuvA N terminal domain F6X00_09425 PF17864 RuvB AAA lid domain F6X00_09425 PF05496 Holliday junction DNA helicase RuvB P-loop domain F6X00_09425 PF05491 RuvB C-terminal winged helix domain F6X00_09430 PF01654 Cytochrome bd terminal oxidase subunit I F6X00_09435 PF02322 Cytochrome bd terminal oxidase subunit II F6X00_09440 PF08173 Membrane bound YbgT-like protein F6X00_09450 PF03061 Thioesterase superfamily F6X00_09455 PF01618 MotA/TolQ/ExbB proton channel family F6X00_09460 PF02472 Biopolymer transport protein ExbD/TolR F6X00_09470 PF07676 WD40-like Beta Propeller Repeat F6X00_09470 PF04052 TolB amino-terminal domain F6X00_09475 PF00691 OmpA family F6X00_09480 PF13174 Tetratricopeptide repeat F6X00_09480 PF16331 TolA binding protein trimerisation F6X00_09485 PF02445 Quinolinate synthetase A protein F6X00_09495 PF03994 Domain of Unknown Function (DUF350) F6X00_09505 PF03738 Glutathionylspermidine synthase preATP-grasp F6X00_09515 PF00072 Response regulator receiver domain F6X00_09515 PF09308 LuxQ, periplasmic F6X00_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_09515 PF00512 His Kinase A (phospho-acceptor) domain F6X00_09520 PF06610 L-alanine exporter F6X00_09570 PF04229 GrpB protein F6X00_09585 PF13419 Haloacid dehalogenase-like hydrolase F6X00_09590 PF00672 HAMP domain F6X00_09590 PF02743 Cache domain F6X00_09590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_09595 PF08220 DeoR-like helix-turn-helix domain F6X00_09595 PF00455 DeoR C terminal sensor domain F6X00_09600 PF07690 Major Facilitator Superfamily F6X00_09605 PF02952 L-fucose isomerase, C-terminal domain F6X00_09605 PF07882 L-fucose isomerase, second N-terminal domain F6X00_09605 PF07881 L-fucose isomerase, first N-terminal domain F6X00_09610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F6X00_09610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F6X00_09615 PF05025 RbsD / FucU transport protein family F6X00_09620 PF00596 Class II Aldolase and Adducin N-terminal domain F6X00_09625 PF00465 Iron-containing alcohol dehydrogenase F6X00_09630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_09630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_09635 PF03741 Integral membrane protein TerC family F6X00_09655 PF12833 Helix-turn-helix domain F6X00_09655 PF02311 AraC-like ligand binding domain F6X00_09660 PF01740 STAS domain F6X00_09660 PF00916 Sulfate permease family F6X00_09670 PF00990 Diguanylate cyclase, GGDEF domain F6X00_09670 PF00563 EAL domain F6X00_09670 PF03707 Bacterial signalling protein N terminal repeat F6X00_09675 PF08497 Radical SAM N-terminal F6X00_09675 PF04055 Radical SAM superfamily F6X00_09675 PF11842 Domain of unknown function (DUF3362) F6X00_09680 PF00563 EAL domain F6X00_09680 PF03707 Bacterial signalling protein N terminal repeat F6X00_09680 PF00990 Diguanylate cyclase, GGDEF domain F6X00_09685 PF03707 Bacterial signalling protein N terminal repeat F6X00_09685 PF00990 Diguanylate cyclase, GGDEF domain F6X00_09685 PF00563 EAL domain F6X00_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_09700 PF03466 LysR substrate binding domain F6X00_09705 PF01717 Cobalamin-independent synthase, Catalytic domain F6X00_09705 PF08267 Cobalamin-independent synthase, N-terminal domain F6X00_09710 PF01515 Phosphate acetyl/butaryl transferase F6X00_09710 PF07085 DRTGG domain F6X00_09715 PF00871 Acetokinase family F6X00_09720 PF04217 Protein of unknown function, DUF412 F6X00_09730 PF02653 Branched-chain amino acid transport system / permease component F6X00_09735 PF00005 ABC transporter F6X00_09740 PF02903 Alpha amylase, N-terminal ig-like domain F6X00_09740 PF00128 Alpha amylase, catalytic domain F6X00_09745 PF00990 Diguanylate cyclase, GGDEF domain F6X00_09750 PF01207 Dihydrouridine synthase (Dus) F6X00_09755 PF03695 Uncharacterised protein family (UPF0149) F6X00_09755 PF02810 SEC-C motif F6X00_09760 PF02600 Disulfide bond formation protein DsbB F6X00_09765 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F6X00_09770 PF00392 Bacterial regulatory proteins, gntR family F6X00_09770 PF07840 FadR C-terminal domain F6X00_09775 PF00925 GTP cyclohydrolase II F6X00_09800 PF01471 Putative peptidoglycan binding domain F6X00_09800 PF03734 L,D-transpeptidase catalytic domain F6X00_09805 PF05951 Bacterial protein of unknown function (DUF882) F6X00_09810 PF00753 Metallo-beta-lactamase superfamily F6X00_09825 PF03480 Bacterial extracellular solute-binding protein, family 7 F6X00_09835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F6X00_09840 PF17200 Single Cache domain 2 F6X00_09840 PF07730 Histidine kinase F6X00_09845 PF00072 Response regulator receiver domain F6X00_09845 PF00196 Bacterial regulatory proteins, luxR family F6X00_09850 PF01047 MarR family F6X00_09855 PF02028 BCCT, betaine/carnitine/choline family transporter F6X00_09860 PF02743 Cache domain F6X00_09860 PF00672 HAMP domain F6X00_09860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_09880 PF00155 Aminotransferase class I and II F6X00_09885 PF00672 HAMP domain F6X00_09885 PF01966 HD domain F6X00_09900 PF00392 Bacterial regulatory proteins, gntR family F6X00_09900 PF00155 Aminotransferase class I and II F6X00_09910 PF00152 tRNA synthetases class II (D, K and N) F6X00_09910 PF01336 OB-fold nucleic acid binding domain F6X00_09915 PF17200 Single Cache domain 2 F6X00_09915 PF00672 HAMP domain F6X00_09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_09920 PF01242 6-pyruvoyl tetrahydropterin synthase F6X00_09930 PF04940 Sensors of blue-light using FAD F6X00_09930 PF00563 EAL domain F6X00_09935 PF03315 Serine dehydratase beta chain F6X00_09935 PF03313 Serine dehydratase alpha chain F6X00_09940 PF03222 Tryptophan/tyrosine permease family F6X00_09945 PF00293 NUDIX domain F6X00_09955 PF00072 Response regulator receiver domain F6X00_09955 PF09308 LuxQ, periplasmic F6X00_09955 PF00512 His Kinase A (phospho-acceptor) domain F6X00_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_09965 PF00425 chorismate binding enzyme F6X00_09965 PF04715 Anthranilate synthase component I, N terminal region F6X00_09980 PF04317 YcjX-like family, DUF463 F6X00_09985 PF05128 Domain of unknown function (DUF697) F6X00_09990 PF00158 Sigma-54 interaction domain F6X00_09990 PF13188 PAS domain F6X00_09990 PF18024 Helix-turn-helix domain F6X00_09995 PF13302 Acetyltransferase (GNAT) domain F6X00_10010 PF00939 Sodium:sulfate symporter transmembrane region F6X00_10015 PF00512 His Kinase A (phospho-acceptor) domain F6X00_10015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_10015 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_10025 PF00990 Diguanylate cyclase, GGDEF domain F6X00_10025 PF17158 Membrane-associated sensor, integral membrane domain F6X00_10030 PF05231 MASE1 F6X00_10030 PF00563 EAL domain F6X00_10040 PF01966 HD domain F6X00_10040 PF11871 Domain of unknown function (DUF3391) F6X00_10045 PF13188 PAS domain F6X00_10045 PF03707 Bacterial signalling protein N terminal repeat F6X00_10045 PF00990 Diguanylate cyclase, GGDEF domain F6X00_10045 PF00563 EAL domain F6X00_10050 PF11230 Protein of unknown function (DUF3029) F6X00_10055 PF04055 Radical SAM superfamily F6X00_10060 PF03466 LysR substrate binding domain F6X00_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_10075 PF01966 HD domain F6X00_10080 PF01734 Patatin-like phospholipase F6X00_10090 PF00781 Diacylglycerol kinase catalytic domain F6X00_10095 PF03222 Tryptophan/tyrosine permease family F6X00_10100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_10105 PF00072 Response regulator receiver domain F6X00_10110 PF00210 Ferritin-like domain F6X00_10125 PF00664 ABC transporter transmembrane region F6X00_10125 PF00005 ABC transporter F6X00_10130 PF00005 ABC transporter F6X00_10130 PF00664 ABC transporter transmembrane region F6X00_10135 PF01235 Sodium:alanine symporter family F6X00_10140 PF02397 Bacterial sugar transferase F6X00_10150 PF10531 SLBB domain F6X00_10150 PF02563 Polysaccharide biosynthesis/export protein F6X00_10150 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F6X00_10175 PF00534 Glycosyl transferases group 1 F6X00_10175 PF13439 Glycosyltransferase Family 4 F6X00_10180 PF13439 Glycosyltransferase Family 4 F6X00_10180 PF00534 Glycosyl transferases group 1 F6X00_10205 PF00990 Diguanylate cyclase, GGDEF domain F6X00_10205 PF03707 Bacterial signalling protein N terminal repeat F6X00_10205 PF00563 EAL domain F6X00_10220 PF00012 Hsp70 protein F6X00_10225 PF00012 Hsp70 protein F6X00_10235 PF00990 Diguanylate cyclase, GGDEF domain F6X00_10235 PF17158 Membrane-associated sensor, integral membrane domain F6X00_10255 PF06629 MltA-interacting protein MipA F6X00_10285 PF00263 Bacterial type II and III secretion system protein F6X00_10285 PF04972 BON domain F6X00_10285 PF13629 Pilus formation protein N terminal region F6X00_10295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F6X00_10300 PF00437 Type II/IV secretion system protein F6X00_10335 PF02525 Flavodoxin-like fold F6X00_10345 PF00271 Helicase conserved C-terminal domain F6X00_10345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F6X00_10345 PF00270 DEAD/DEAH box helicase F6X00_10345 PF11898 Domain of unknown function (DUF3418) F6X00_10345 PF04408 Helicase associated domain (HA2) F6X00_10370 PF00561 alpha/beta hydrolase fold F6X00_10375 PF03280 Proteobacterial lipase chaperone protein F6X00_10380 PF07690 Major Facilitator Superfamily F6X00_10395 PF12729 Four helix bundle sensory module for signal transduction F6X00_10395 PF00672 HAMP domain F6X00_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_10400 PF00491 Arginase family F6X00_10405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F6X00_10405 PF17944 Arginine decarboxylase C-terminal helical extension F6X00_10405 PF17810 Arginine decarboxylase helical bundle domain F6X00_10465 PF00072 Response regulator receiver domain F6X00_10465 PF00990 Diguanylate cyclase, GGDEF domain F6X00_10470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F6X00_10470 PF01409 tRNA synthetases class II core domain (F) F6X00_10475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F6X00_10475 PF03483 B3/4 domain F6X00_10475 PF03484 tRNA synthetase B5 domain F6X00_10475 PF03147 Ferredoxin-fold anticodon binding domain F6X00_10475 PF01588 Putative tRNA binding domain F6X00_10480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F6X00_10480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F6X00_10495 PF00216 Bacterial DNA-binding protein F6X00_10505 PF05724 Thiopurine S-methyltransferase (TPMT) F6X00_10510 PF02222 ATP-grasp domain F6X00_10515 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F6X00_10515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F6X00_10530 PF00691 OmpA family F6X00_10530 PF13488 Glycine zipper F6X00_10545 PF13183 4Fe-4S dicluster domain F6X00_10545 PF02913 FAD linked oxidases, C-terminal domain F6X00_10545 PF01565 FAD binding domain F6X00_10565 PF00221 Aromatic amino acid lyase F6X00_10570 PF01175 Urocanase Rossmann-like domain F6X00_10570 PF17392 Urocanase C-terminal domain F6X00_10570 PF17391 Urocanase N-terminal domain F6X00_10575 PF00491 Arginase family F6X00_10580 PF01979 Amidohydrolase family F6X00_10585 PF00392 Bacterial regulatory proteins, gntR family F6X00_10585 PF07702 UTRA domain F6X00_10590 PF07070 SpoOM protein F6X00_10600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F6X00_10600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F6X00_10600 PF02824 TGS domain F6X00_10600 PF03129 Anticodon binding domain F6X00_10605 PF05198 Translation initiation factor IF-3, N-terminal domain F6X00_10605 PF00707 Translation initiation factor IF-3, C-terminal domain F6X00_10610 PF01632 Ribosomal protein L35 F6X00_10615 PF00453 Ribosomal protein L20 F6X00_10620 PF13495 Phage integrase, N-terminal SAM-like domain F6X00_10620 PF00589 Phage integrase family F6X00_10745 PF09905 DNA-binding protein VF530 F6X00_10960 PF02798 Glutathione S-transferase, N-terminal domain F6X00_10960 PF00043 Glutathione S-transferase, C-terminal domain F6X00_11050 PF02567 Phenazine biosynthesis-like protein F6X00_11100 PF02567 Phenazine biosynthesis-like protein F6X00_11160 PF01809 Putative membrane protein insertion efficiency factor F6X00_11180 PF13302 Acetyltransferase (GNAT) domain F6X00_11210 PF13673 Acetyltransferase (GNAT) domain F6X00_11225 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F6X00_11450 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F6X00_11455 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F6X00_11470 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F6X00_11635 PF13302 Acetyltransferase (GNAT) domain F6X00_11680 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system F6X00_11685 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA F6X00_11755 PF13302 Acetyltransferase (GNAT) domain F6X00_11850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system F6X00_11855 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system F6X00_11865 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system F6X00_11870 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA F6X00_11930 PF04229 GrpB protein F6X00_11930 PF13673 Acetyltransferase (GNAT) domain F6X00_11940 PF02798 Glutathione S-transferase, N-terminal domain F6X00_11940 PF00043 Glutathione S-transferase, C-terminal domain F6X00_12060 PF14552 Tautomerase enzyme F6X00_12095 PF00589 Phage integrase family F6X00_12110 PF05840 Bacteriophage replication gene A protein (GPA) F6X00_12355 PF08241 Methyltransferase domain F6X00_12420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_12575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_12590 PF01042 Endoribonuclease L-PSP F6X00_12665 PF01554 MatE F6X00_12670 PF00677 Lumazine binding domain F6X00_12680 PF03881 Fructosamine kinase F6X00_12685 PF00072 Response regulator receiver domain F6X00_12685 PF01339 CheB methylesterase F6X00_12690 PF05230 MASE2 domain F6X00_12690 PF00990 Diguanylate cyclase, GGDEF domain F6X00_12700 PF00877 NlpC/P60 family F6X00_12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_12705 PF00672 HAMP domain F6X00_12705 PF02743 Cache domain F6X00_12720 PF00480 ROK family F6X00_12730 PF03453 MoeA N-terminal region (domain I and II) F6X00_12730 PF03454 MoeA C-terminal region (domain IV) F6X00_12730 PF00994 Probable molybdopterin binding domain F6X00_12735 PF12804 MobA-like NTP transferase domain F6X00_12740 PF00005 ABC transporter F6X00_12740 PF08402 TOBE domain F6X00_12745 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_12750 PF12849 PBP superfamily domain F6X00_12755 PF02954 Bacterial regulatory protein, Fis family F6X00_12755 PF00072 Response regulator receiver domain F6X00_12755 PF00158 Sigma-54 interaction domain F6X00_12760 PF00512 His Kinase A (phospho-acceptor) domain F6X00_12760 PF00989 PAS fold F6X00_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_12775 PF12848 ABC transporter F6X00_12775 PF00005 ABC transporter F6X00_12780 PF02743 Cache domain F6X00_12780 PF00672 HAMP domain F6X00_12780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_12785 PF02634 FdhD/NarQ family F6X00_12815 PF00384 Molybdopterin oxidoreductase F6X00_12815 PF01568 Molydopterin dinucleotide binding domain F6X00_12815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F6X00_12820 PF13247 4Fe-4S dicluster domain F6X00_12855 PF00909 Ammonium Transporter Family F6X00_12860 PF02146 Sir2 family F6X00_12865 PF13416 Bacterial extracellular solute-binding protein F6X00_12870 PF13416 Bacterial extracellular solute-binding protein F6X00_12875 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_12880 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_12885 PF08402 TOBE domain F6X00_12885 PF00005 ABC transporter F6X00_12895 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F6X00_12905 PF01171 PP-loop family F6X00_12910 PF00582 Universal stress protein family F6X00_12915 PF00027 Cyclic nucleotide-binding domain F6X00_12915 PF13545 Crp-like helix-turn-helix domain F6X00_12930 PF00403 Heavy-metal-associated domain F6X00_12940 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP F6X00_12940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F6X00_12955 PF00115 Cytochrome C and Quinol oxidase polypeptide I F6X00_12970 PF00512 His Kinase A (phospho-acceptor) domain F6X00_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_12970 PF00072 Response regulator receiver domain F6X00_12970 PF09308 LuxQ, periplasmic F6X00_12990 PF05840 Bacteriophage replication gene A protein (GPA) F6X00_13020 PF03958 Bacterial type II/III secretion system short domain F6X00_13020 PF00263 Bacterial type II and III secretion system protein F6X00_13045 PF06303 MatP N-terminal domain F6X00_13045 PF17414 MatP C-terminal ribbon-helix-helix domain F6X00_13050 PF05362 Lon protease (S16) C-terminal proteolytic domain F6X00_13050 PF13654 AAA domain F6X00_13055 PF07977 FabA-like domain F6X00_13060 PF04957 Ribosome modulation factor F6X00_13070 PF00005 ABC transporter F6X00_13070 PF16326 ABC transporter C-terminal domain F6X00_13070 PF12848 ABC transporter F6X00_13080 PF01170 Putative RNA methylase family UPF0020 F6X00_13080 PF02926 THUMP domain F6X00_13080 PF10672 S-adenosylmethionine-dependent methyltransferase F6X00_13085 PF07126 Cell-division protein ZapC F6X00_13090 PF01180 Dihydroorotate dehydrogenase F6X00_13095 PF05088 Bacterial NAD-glutamate dehydrogenase F6X00_13105 PF01433 Peptidase family M1 domain F6X00_13105 PF11940 Domain of unknown function (DUF3458) Ig-like fold F6X00_13105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F6X00_13115 PF17804 Tail specific protease N-terminal domain F6X00_13115 PF03572 Peptidase family S41 F6X00_13115 PF00595 PDZ domain F6X00_13115 PF11818 C-terminal domain of tail specific protease (DUF3340) F6X00_13120 PF17516 ProQ C-terminal domain F6X00_13120 PF04352 ProQ/FINO family F6X00_13125 PF13185 GAF domain F6X00_13130 PF00005 ABC transporter F6X00_13130 PF00664 ABC transporter transmembrane region F6X00_13135 PF04403 Paraquat-inducible protein A F6X00_13140 PF02470 MlaD protein F6X00_13145 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF F6X00_13145 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF F6X00_13145 PF01189 16S rRNA methyltransferase RsmB/F F6X00_13150 PF17783 CvfB-like winged helix domain F6X00_13150 PF13509 S1 domain F6X00_13165 PF00793 DAHP synthetase I family F6X00_13170 PF04461 Protein of unknown function (DUF520) F6X00_13175 PF17158 Membrane-associated sensor, integral membrane domain F6X00_13175 PF00990 Diguanylate cyclase, GGDEF domain F6X00_13180 PF14743 DNA ligase OB-like domain F6X00_13180 PF01068 ATP dependent DNA ligase domain F6X00_13185 PF01740 STAS domain F6X00_13195 PF10531 SLBB domain F6X00_13195 PF02563 Polysaccharide biosynthesis/export protein F6X00_13210 PF01627 Hpt domain F6X00_13210 PF00512 His Kinase A (phospho-acceptor) domain F6X00_13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_13210 PF00072 Response regulator receiver domain F6X00_13210 PF00672 HAMP domain F6X00_13210 PF17149 Periplasmic sensor domain found in signal transduction proteins F6X00_13215 PF00158 Sigma-54 interaction domain F6X00_13215 PF00072 Response regulator receiver domain F6X00_13215 PF02954 Bacterial regulatory protein, Fis family F6X00_13260 PF00534 Glycosyl transferases group 1 F6X00_13260 PF13439 Glycosyltransferase Family 4 F6X00_13270 PF02397 Bacterial sugar transferase F6X00_13310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F6X00_13310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F6X00_13315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F6X00_13320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F6X00_13320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F6X00_13325 PF12431 Transcriptional regulator F6X00_13325 PF00072 Response regulator receiver domain F6X00_13330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F6X00_13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_13330 PF17203 Single cache domain 3 F6X00_13330 PF00989 PAS fold F6X00_13345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_13370 PF01235 Sodium:alanine symporter family F6X00_13385 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F6X00_13390 PF01553 Acyltransferase F6X00_13395 PF12801 4Fe-4S binding domain F6X00_13395 PF13237 4Fe-4S dicluster domain F6X00_13400 PF12838 4Fe-4S dicluster domain F6X00_13400 PF12800 4Fe-4S binding domain F6X00_13405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F6X00_13405 PF14824 Sirohaem biosynthesis protein central F6X00_13405 PF10414 Sirohaem synthase dimerisation region F6X00_13410 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_13415 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_13420 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_13425 PF00005 ABC transporter F6X00_13430 PF01027 Inhibitor of apoptosis-promoting Bax1 F6X00_13440 PF04358 DsrC like protein F6X00_13445 PF00708 Acylphosphatase F6X00_13450 PF02743 Cache domain F6X00_13450 PF00672 HAMP domain F6X00_13450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_13455 PF17785 PUA-like domain F6X00_13455 PF10672 S-adenosylmethionine-dependent methyltransferase F6X00_13480 PF17151 Periplasmic sensor domain F6X00_13480 PF00990 Diguanylate cyclase, GGDEF domain F6X00_13485 PF06508 Queuosine biosynthesis protein QueC F6X00_13490 PF04055 Radical SAM superfamily F6X00_13500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_13500 PF02743 Cache domain F6X00_13500 PF00672 HAMP domain F6X00_13510 PF00089 Trypsin F6X00_13525 PF16177 Acetyl-coenzyme A synthetase N-terminus F6X00_13525 PF13193 AMP-binding enzyme C-terminal domain F6X00_13525 PF00501 AMP-binding enzyme F6X00_13530 PF04303 PrpF protein F6X00_13535 PF00694 Aconitase C-terminal domain F6X00_13535 PF00330 Aconitase family (aconitate hydratase) F6X00_13540 PF00285 Citrate synthase, C-terminal domain F6X00_13570 PF01970 Tripartite tricarboxylate transporter TctA family F6X00_13595 PF00072 Response regulator receiver domain F6X00_13595 PF00196 Bacterial regulatory proteins, luxR family F6X00_13605 PF01925 Sulfite exporter TauE/SafE F6X00_13610 PF00672 HAMP domain F6X00_13610 PF02743 Cache domain F6X00_13610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_13615 PF00072 Response regulator receiver domain F6X00_13620 PF13416 Bacterial extracellular solute-binding protein F6X00_13625 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_13630 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_13635 PF00005 ABC transporter F6X00_13635 PF17912 MalK OB fold domain F6X00_13640 PF00455 DeoR C terminal sensor domain F6X00_13640 PF08220 DeoR-like helix-turn-helix domain F6X00_13645 PF03009 Glycerophosphoryl diester phosphodiesterase family F6X00_13650 PF00141 Peroxidase F6X00_13660 PF00313 'Cold-shock' DNA-binding domain F6X00_13665 PF00990 Diguanylate cyclase, GGDEF domain F6X00_13665 PF00072 Response regulator receiver domain F6X00_13700 PF02798 Glutathione S-transferase, N-terminal domain F6X00_13700 PF14497 Glutathione S-transferase, C-terminal domain F6X00_13710 PF04209 homogentisate 1,2-dioxygenase F6X00_13715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_13720 PF01546 Peptidase family M20/M25/M40 F6X00_13720 PF07687 Peptidase dimerisation domain F6X00_13725 PF02872 5'-nucleotidase, C-terminal domain F6X00_13725 PF00149 Calcineurin-like phosphoesterase F6X00_13730 PF04204 Homoserine O-succinyltransferase F6X00_13745 PF05971 RNA methyltransferase F6X00_13750 PF01863 Protein of unknown function DUF45 F6X00_13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_13760 PF03466 LysR substrate binding domain F6X00_13765 PF07690 Major Facilitator Superfamily F6X00_13780 PF00005 ABC transporter F6X00_13785 PF01032 FecCD transport family F6X00_13790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F6X00_13805 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F6X00_13810 PF02654 Cobalamin-5-phosphate synthase F6X00_13815 PF02277 Phosphoribosyltransferase F6X00_13830 PF00929 Exonuclease F6X00_13830 PF08411 Exonuclease C-terminal F6X00_13835 PF03788 LrgA family F6X00_13840 PF04172 LrgB-like family F6X00_13850 PF01259 SAICAR synthetase F6X00_13860 PF02253 Phospholipase A1 F6X00_13865 PF00270 DEAD/DEAH box helicase F6X00_13865 PF00271 Helicase conserved C-terminal domain F6X00_13865 PF08482 ATP-dependent helicase C-terminal F6X00_13865 PF04408 Helicase associated domain (HA2) F6X00_13870 PF00390 Malic enzyme, N-terminal domain F6X00_13870 PF03949 Malic enzyme, NAD binding domain F6X00_13875 PF02698 DUF218 domain F6X00_13880 PF00939 Sodium:sulfate symporter transmembrane region F6X00_13885 PF00990 Diguanylate cyclase, GGDEF domain F6X00_13885 PF00072 Response regulator receiver domain F6X00_13895 PF00266 Aminotransferase class-V F6X00_13905 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_13910 PF00664 ABC transporter transmembrane region F6X00_13910 PF00005 ABC transporter F6X00_13915 PF00005 ABC transporter F6X00_13915 PF00664 ABC transporter transmembrane region F6X00_13920 PF00266 Aminotransferase class-V F6X00_13930 PF00512 His Kinase A (phospho-acceptor) domain F6X00_13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_13930 PF13188 PAS domain F6X00_13930 PF13426 PAS domain F6X00_13930 PF13188 PAS domain F6X00_13930 PF13426 PAS domain F6X00_13930 PF00989 PAS fold F6X00_13930 PF00512 His Kinase A (phospho-acceptor) domain F6X00_13930 PF00989 PAS fold F6X00_13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_13945 PF04993 TfoX N-terminal domain F6X00_13945 PF04994 TfoX C-terminal domain F6X00_13955 PF03956 Lysine exporter LysO F6X00_13965 PF00282 Pyridoxal-dependent decarboxylase conserved domain F6X00_13970 PF01418 Helix-turn-helix domain, rpiR family F6X00_13970 PF01380 SIS domain F6X00_13975 PF00465 Iron-containing alcohol dehydrogenase F6X00_13980 PF00462 Glutaredoxin F6X00_13985 PF06826 Predicted Permease Membrane Region F6X00_13985 PF02080 TrkA-C domain F6X00_13990 PF07055 Enoyl reductase FAD binding domain F6X00_13990 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F6X00_13990 PF12241 Trans-2-enoyl-CoA reductase catalytic region F6X00_13995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F6X00_13995 PF02770 Acyl-CoA dehydrogenase, middle domain F6X00_13995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F6X00_13995 PF09317 Domain of unknown function (DUF1974) F6X00_14005 PF06965 Na+/H+ antiporter 1 F6X00_14020 PF00005 ABC transporter F6X00_14025 PF13460 NAD(P)H-binding F6X00_14025 PF11066 Protein of unknown function (DUF2867) F6X00_14030 PF00999 Sodium/hydrogen exchanger family F6X00_14040 PF07690 Major Facilitator Superfamily F6X00_14045 PF01479 S4 domain F6X00_14045 PF00849 RNA pseudouridylate synthase F6X00_14050 PF04851 Type III restriction enzyme, res subunit F6X00_14050 PF00271 Helicase conserved C-terminal domain F6X00_14060 PF00072 Response regulator receiver domain F6X00_14060 PF00486 Transcriptional regulatory protein, C terminal F6X00_14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_14065 PF00512 His Kinase A (phospho-acceptor) domain F6X00_14065 PF00672 HAMP domain F6X00_14070 PF01386 Ribosomal L25p family F6X00_14085 PF00990 Diguanylate cyclase, GGDEF domain F6X00_14085 PF03707 Bacterial signalling protein N terminal repeat F6X00_14085 PF00563 EAL domain F6X00_14105 PF06945 Protein of unknown function (DUF1289) F6X00_14115 PF13416 Bacterial extracellular solute-binding protein F6X00_14120 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_14125 PF00005 ABC transporter F6X00_14130 PF01066 CDP-alcohol phosphatidyltransferase F6X00_14135 PF01590 GAF domain F6X00_14135 PF00158 Sigma-54 interaction domain F6X00_14140 PF03063 Prismane/CO dehydrogenase family F6X00_14145 PF00970 Oxidoreductase FAD-binding domain F6X00_14145 PF00175 Oxidoreductase NAD-binding domain F6X00_14145 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_14155 PF00849 RNA pseudouridylate synthase F6X00_14160 PF00672 HAMP domain F6X00_14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_14160 PF12729 Four helix bundle sensory module for signal transduction F6X00_14165 PF00209 Sodium:neurotransmitter symporter family F6X00_14170 PF13091 PLD-like domain F6X00_14170 PF13396 Phospholipase_D-nuclease N-terminal F6X00_14175 PF01053 Cys/Met metabolism PLP-dependent enzyme F6X00_14180 PF03352 Methyladenine glycosylase F6X00_14185 PF00873 AcrB/AcrD/AcrF family F6X00_14190 PF13533 Biotin-lipoyl like F6X00_14200 PF04024 PspC domain F6X00_14205 PF06667 Phage shock protein B F6X00_14210 PF04012 PspA/IM30 family F6X00_14215 PF02954 Bacterial regulatory protein, Fis family F6X00_14215 PF00158 Sigma-54 interaction domain F6X00_14220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_14225 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_14230 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_14230 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_14235 PF00005 ABC transporter F6X00_14235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_14240 PF00005 ABC transporter F6X00_14255 PF02833 DHHA2 domain F6X00_14255 PF01368 DHH family F6X00_14265 PF16875 Glycosyl hydrolase family 36 N-terminal domain F6X00_14265 PF16874 Glycosyl hydrolase family 36 C-terminal domain F6X00_14285 PF00384 Molybdopterin oxidoreductase F6X00_14285 PF01568 Molydopterin dinucleotide binding domain F6X00_14285 PF18364 Molybdopterin oxidoreductase N-terminal domain F6X00_14290 PF03264 NapC/NirT cytochrome c family, N-terminal region F6X00_14295 PF06796 Periplasmic nitrate reductase protein NapE F6X00_14300 PF03649 Uncharacterised protein family (UPF0014) F6X00_14305 PF01226 Formate/nitrite transporter F6X00_14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_14325 PF03466 LysR substrate binding domain F6X00_14330 PF01370 NAD dependent epimerase/dehydratase family F6X00_14340 PF00265 Thymidine kinase F6X00_14345 PF01406 tRNA synthetases class I (C) catalytic domain F6X00_14345 PF09190 DALR domain F6X00_14350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F6X00_14355 PF00149 Calcineurin-like phosphoesterase F6X00_14360 PF08668 HDOD domain F6X00_14360 PF00563 EAL domain F6X00_14365 PF02810 SEC-C motif F6X00_14370 PF01502 Phosphoribosyl-AMP cyclohydrolase F6X00_14370 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F6X00_14375 PF00977 Histidine biosynthesis protein F6X00_14380 PF00977 Histidine biosynthesis protein F6X00_14385 PF00117 Glutamine amidotransferase class-I F6X00_14390 PF00475 Imidazoleglycerol-phosphate dehydratase F6X00_14390 PF08645 Polynucleotide kinase 3 phosphatase F6X00_14395 PF00155 Aminotransferase class I and II F6X00_14400 PF00815 Histidinol dehydrogenase F6X00_14405 PF08029 HisG, C-terminal domain F6X00_14405 PF01634 ATP phosphoribosyltransferase F6X00_14410 PF03553 Na+/H+ antiporter family F6X00_14415 PF00816 H-NS histone family F6X00_14420 PF00294 pfkB family carbohydrate kinase F6X00_14435 PF04356 Protein of unknown function (DUF489) F6X00_14440 PF08328 Adenylosuccinate lyase C-terminal F6X00_14440 PF00206 Lyase F6X00_14475 PF00106 short chain dehydrogenase F6X00_14485 PF01435 Peptidase family M48 F6X00_14495 PF08241 Methyltransferase domain F6X00_14500 PF00155 Aminotransferase class I and II F6X00_14505 PF06968 Biotin and Thiamin Synthesis associated domain F6X00_14505 PF04055 Radical SAM superfamily F6X00_14510 PF00202 Aminotransferase class-III F6X00_14515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F6X00_14515 PF02403 Seryl-tRNA synthetase N-terminal domain F6X00_14520 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_14520 PF16193 AAA C-terminal domain F6X00_14520 PF12002 MgsA AAA+ ATPase C terminal F6X00_14525 PF03548 Outer membrane lipoprotein carrier protein LolA F6X00_14530 PF01580 FtsK/SpoIIIE family F6X00_14530 PF09397 Ftsk gamma domain F6X00_14530 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F6X00_14530 PF17854 FtsK alpha domain F6X00_14535 PF01037 Lrp/AsnC ligand binding domain F6X00_14540 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F6X00_14540 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F6X00_14550 PF03466 LysR substrate binding domain F6X00_14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_14570 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F6X00_14580 PF13006 Insertion element 4 transposase N-terminal F6X00_14580 PF01609 Transposase DDE domain F6X00_14595 PF00005 ABC transporter F6X00_14595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_14600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_14600 PF00005 ABC transporter F6X00_14605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_14610 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_14610 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_14615 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_14620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F6X00_14625 PF18073 Rubredoxin metal binding domain F6X00_14630 PF06305 Lipopolysaccharide assembly protein A domain F6X00_14635 PF00216 Bacterial DNA-binding protein F6X00_14640 PF00575 S1 RNA binding domain F6X00_14645 PF02224 Cytidylate kinase F6X00_14650 PF01343 Peptidase family S49 F6X00_14650 PF08496 Peptidase family S49 N-terminal F6X00_14655 PF00106 short chain dehydrogenase F6X00_14670 PF01336 OB-fold nucleic acid binding domain F6X00_14670 PF07733 Bacterial DNA polymerase III alpha NTPase domain F6X00_14670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F6X00_14670 PF02811 PHP domain F6X00_14670 PF14579 Helix-hairpin-helix motif F6X00_14675 PF01584 CheW-like domain F6X00_14675 PF00072 Response regulator receiver domain F6X00_14680 PF00480 ROK family F6X00_14685 PF02887 Pyruvate kinase, alpha/beta domain F6X00_14685 PF00224 Pyruvate kinase, barrel domain F6X00_14690 PF01734 Patatin-like phospholipase F6X00_14705 PF00209 Sodium:neurotransmitter symporter family F6X00_14720 PF02378 Phosphotransferase system, EIIC F6X00_14720 PF00367 phosphotransferase system, EIIB F6X00_14725 PF01026 TatD related DNase F6X00_14730 PF09115 DNA polymerase III, delta subunit, C terminal F6X00_14735 PF02223 Thymidylate kinase F6X00_14740 PF02618 YceG-like family F6X00_14745 PF01063 Amino-transferase class IV F6X00_14750 PF00109 Beta-ketoacyl synthase, N-terminal domain F6X00_14750 PF02801 Beta-ketoacyl synthase, C-terminal domain F6X00_14755 PF00550 Phosphopantetheine attachment site F6X00_14765 PF00698 Acyl transferase domain F6X00_14770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F6X00_14770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F6X00_14775 PF02504 Fatty acid synthesis protein F6X00_14780 PF01783 Ribosomal L32p protein family F6X00_14785 PF02620 Large ribosomal RNA subunit accumulation protein YceD F6X00_14790 PF02545 Maf-like protein F6X00_14795 PF01479 S4 domain F6X00_14795 PF00849 RNA pseudouridylate synthase F6X00_14800 PF12111 Polyribonucleotide phosphorylase C terminal F6X00_14800 PF00575 S1 RNA binding domain F6X00_14800 PF10150 Ribonuclease E/G family F6X00_14805 PF00916 Sulfate permease family F6X00_14805 PF01740 STAS domain F6X00_14810 PF01451 Low molecular weight phosphotyrosine protein phosphatase F6X00_14815 PF12557 Cob(I)alamin adenosyltransferase N terminal F6X00_14815 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F6X00_14825 PF00485 Phosphoribulokinase / Uridine kinase family F6X00_14830 PF10609 NUBPL iron-transfer P-loop NTPase F6X00_14835 PF01588 Putative tRNA binding domain F6X00_14835 PF09334 tRNA synthetases class I (M) F6X00_14845 PF03918 Cytochrome C biogenesis protein F6X00_14850 PF08534 Redoxin F6X00_14855 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F6X00_14855 PF01578 Cytochrome C assembly protein F6X00_14860 PF03916 Polysulphide reductase, NrfD F6X00_14865 PF13247 4Fe-4S dicluster domain F6X00_14875 PF02335 Cytochrome c552 F6X00_14890 PF00521 DNA gyrase/topoisomerase IV, subunit A F6X00_14890 PF03989 DNA gyrase C-terminal domain, beta-propeller F6X00_14900 PF03477 ATP cone domain F6X00_14900 PF02867 Ribonucleotide reductase, barrel domain F6X00_14900 PF00317 Ribonucleotide reductase, all-alpha domain F6X00_14905 PF00268 Ribonucleotide reductase, small chain F6X00_14915 PF00994 Probable molybdopterin binding domain F6X00_14915 PF02464 Competence-damaged protein F6X00_14935 PF16653 Saccharopine dehydrogenase C-terminal domain F6X00_14935 PF03435 Saccharopine dehydrogenase NADP binding domain F6X00_14940 PF00202 Aminotransferase class-III F6X00_14965 PF01066 CDP-alcohol phosphatidyltransferase F6X00_14970 PF08459 UvrC Helix-hairpin-helix N-terminal F6X00_14970 PF02151 UvrB/uvrC motif F6X00_14970 PF01541 GIY-YIG catalytic domain F6X00_14975 PF00196 Bacterial regulatory proteins, luxR family F6X00_14975 PF00072 Response regulator receiver domain F6X00_14980 PF03104 DNA polymerase family B, exonuclease domain F6X00_14980 PF00136 DNA polymerase family B F6X00_14985 PF00990 Diguanylate cyclase, GGDEF domain F6X00_14985 PF08448 PAS fold F6X00_14985 PF08447 PAS fold F6X00_14985 PF00563 EAL domain F6X00_14995 PF09285 Elongation factor P, C-terminal F6X00_14995 PF01132 Elongation factor P (EF-P) OB domain F6X00_14995 PF08207 Elongation factor P (EF-P) KOW-like domain F6X00_15000 PF04269 Protein of unknown function, DUF440 F6X00_15005 PF01479 S4 domain F6X00_15005 PF00849 RNA pseudouridylate synthase F6X00_15015 PF01300 Telomere recombination F6X00_15020 PF02811 PHP domain F6X00_15025 PF08056 Tryptophan operon leader peptide F6X00_15030 PF04715 Anthranilate synthase component I, N terminal region F6X00_15030 PF00425 chorismate binding enzyme F6X00_15035 PF00117 Glutamine amidotransferase class-I F6X00_15040 PF02885 Glycosyl transferase family, helical bundle domain F6X00_15040 PF00591 Glycosyl transferase family, a/b domain F6X00_15045 PF00218 Indole-3-glycerol phosphate synthase F6X00_15045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F6X00_15050 PF00291 Pyridoxal-phosphate dependent enzyme F6X00_15055 PF00290 Tryptophan synthase alpha chain F6X00_15060 PF00375 Sodium:dicarboxylate symporter family F6X00_15070 PF04279 Intracellular septation protein A F6X00_15075 PF03061 Thioesterase superfamily F6X00_15080 PF03795 YCII-related domain F6X00_15090 PF13409 Glutathione S-transferase, N-terminal domain F6X00_15095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_15095 PF00005 ABC transporter F6X00_15100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_15100 PF00005 ABC transporter F6X00_15105 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_15105 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_15110 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_15115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_15120 PF02391 MoaE protein F6X00_15125 PF02597 ThiS family F6X00_15130 PF01967 MoaC family F6X00_15135 PF00994 Probable molybdopterin binding domain F6X00_15140 PF04055 Radical SAM superfamily F6X00_15140 PF06463 Molybdenum Cofactor Synthesis C F6X00_15145 PF01933 Uncharacterised protein family UPF0052 F6X00_15150 PF01627 Hpt domain F6X00_15155 PF02954 Bacterial regulatory protein, Fis family F6X00_15155 PF00158 Sigma-54 interaction domain F6X00_15155 PF00072 Response regulator receiver domain F6X00_15160 PF17757 UvrB interaction domain F6X00_15160 PF12344 Ultra-violet resistance protein B F6X00_15160 PF02151 UvrB/uvrC motif F6X00_15160 PF04851 Type III restriction enzyme, res subunit F6X00_15160 PF00271 Helicase conserved C-terminal domain F6X00_15175 PF02508 Rnf-Nqr subunit, membrane protein F6X00_15180 PF04060 Putative Fe-S cluster F6X00_15185 PF10531 SLBB domain F6X00_15185 PF13375 RnfC Barrel sandwich hybrid domain F6X00_15185 PF12838 4Fe-4S dicluster domain F6X00_15185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F6X00_15190 PF03116 NQR2, RnfD, RnfE family F6X00_15195 PF04205 FMN-binding domain F6X00_15200 PF02508 Rnf-Nqr subunit, membrane protein F6X00_15205 PF00633 Helix-hairpin-helix motif F6X00_15205 PF00730 HhH-GPD superfamily base excision DNA repair protein F6X00_15205 PF10576 Iron-sulfur binding domain of endonuclease III F6X00_15210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_15215 PF10952 Protein of unknown function (DUF2753) F6X00_15220 PF18393 MotY N-terminal domain F6X00_15220 PF00691 OmpA family F6X00_15225 PF00929 Exonuclease F6X00_15230 PF13726 Na+-H+ antiporter family F6X00_15230 PF03553 Na+/H+ antiporter family F6X00_15240 PF00462 Glutaredoxin F6X00_15245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F6X00_15245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F6X00_15260 PF00171 Aldehyde dehydrogenase family F6X00_15260 PF00465 Iron-containing alcohol dehydrogenase F6X00_15265 PF01914 MarC family integral membrane protein F6X00_15270 PF00027 Cyclic nucleotide-binding domain F6X00_15270 PF00520 Ion transport protein F6X00_15280 PF01118 Semialdehyde dehydrogenase, NAD binding domain F6X00_15280 PF02774 Semialdehyde dehydrogenase, dimerisation domain F6X00_15285 PF03553 Na+/H+ antiporter family F6X00_15300 PF04245 37-kD nucleoid-associated bacterial protein F6X00_15305 PF07208 Protein of unknown function (DUF1414) F6X00_15310 PF00884 Sulfatase F6X00_15310 PF11893 Domain of unknown function (DUF3413) F6X00_15335 PF02080 TrkA-C domain F6X00_15335 PF02254 TrkA-N domain F6X00_15340 PF02386 Cation transport protein F6X00_15345 PF04074 YhcH/YjgK/YiaL F6X00_15350 PF13091 PLD-like domain F6X00_15355 PF00990 Diguanylate cyclase, GGDEF domain F6X00_15355 PF00072 Response regulator receiver domain F6X00_15360 PF09308 LuxQ, periplasmic F6X00_15360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_15360 PF00512 His Kinase A (phospho-acceptor) domain F6X00_15360 PF00072 Response regulator receiver domain F6X00_15365 PF00850 Histone deacetylase domain F6X00_15370 PF01131 DNA topoisomerase F6X00_15370 PF01751 Toprim domain F6X00_15375 PF00881 Nitroreductase family F6X00_15380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F6X00_15380 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_15385 PF01343 Peptidase family S49 F6X00_15390 PF00710 Asparaginase, N-terminal F6X00_15390 PF17763 Glutaminase/Asparaginase C-terminal domain F6X00_15395 PF07023 Protein of unknown function (DUF1315) F6X00_15405 PF01641 SelR domain F6X00_15410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F6X00_15410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F6X00_15415 PF01263 Aldose 1-epimerase F6X00_15420 PF00672 HAMP domain F6X00_15420 PF02743 Cache domain F6X00_15420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_15435 PF07969 Amidohydrolase family F6X00_15445 PF00563 EAL domain F6X00_15445 PF00990 Diguanylate cyclase, GGDEF domain F6X00_15445 PF13426 PAS domain F6X00_15455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F6X00_15460 PF09619 Type III secretion system lipoprotein chaperone (YscW) F6X00_15475 PF13404 AsnC-type helix-turn-helix domain F6X00_15475 PF01037 Lrp/AsnC ligand binding domain F6X00_15480 PF00291 Pyridoxal-phosphate dependent enzyme F6X00_15515 PF00873 AcrB/AcrD/AcrF family F6X00_15520 PF00529 HlyD membrane-fusion protein of T1SS F6X00_15520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_15560 PF07690 Major Facilitator Superfamily F6X00_15565 PF03601 Conserved hypothetical protein 698 F6X00_15570 PF00501 AMP-binding enzyme F6X00_15570 PF13193 AMP-binding enzyme C-terminal domain F6X00_15575 PF13378 Enolase C-terminal domain-like F6X00_15580 PF00378 Enoyl-CoA hydratase/isomerase F6X00_15585 PF12697 Alpha/beta hydrolase family F6X00_15590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F6X00_15590 PF16582 Middle domain of thiamine pyrophosphate F6X00_15590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F6X00_15595 PF00425 chorismate binding enzyme F6X00_15600 PF00155 Aminotransferase class I and II F6X00_15610 PF13286 Phosphohydrolase-associated domain F6X00_15610 PF01966 HD domain F6X00_15630 PF13145 PPIC-type PPIASE domain F6X00_15635 PF00216 Bacterial DNA-binding protein F6X00_15640 PF05362 Lon protease (S16) C-terminal proteolytic domain F6X00_15640 PF02190 ATP-dependent protease La (LON) substrate-binding domain F6X00_15640 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_15645 PF07724 AAA domain (Cdc48 subfamily) F6X00_15645 PF06689 ClpX C4-type zinc finger F6X00_15645 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_15650 PF00574 Clp protease F6X00_15655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_15655 PF05698 Bacterial trigger factor protein (TF) C-terminus F6X00_15655 PF05697 Bacterial trigger factor protein (TF) F6X00_15660 PF02743 Cache domain F6X00_15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_15660 PF00512 His Kinase A (phospho-acceptor) domain F6X00_15665 PF02954 Bacterial regulatory protein, Fis family F6X00_15665 PF00072 Response regulator receiver domain F6X00_15665 PF00158 Sigma-54 interaction domain F6X00_15675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F6X00_15680 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F6X00_15685 PF03480 Bacterial extracellular solute-binding protein, family 7 F6X00_15690 PF00005 ABC transporter F6X00_15690 PF17912 MalK OB fold domain F6X00_15690 PF03459 TOBE domain F6X00_15695 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_15700 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_15705 PF01547 Bacterial extracellular solute-binding protein F6X00_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_15710 PF00512 His Kinase A (phospho-acceptor) domain F6X00_15710 PF00672 HAMP domain F6X00_15715 PF00072 Response regulator receiver domain F6X00_15715 PF00486 Transcriptional regulatory protein, C terminal F6X00_15720 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F6X00_15725 PF00672 HAMP domain F6X00_15725 PF02743 Cache domain F6X00_15725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_15740 PF04820 Tryptophan halogenase F6X00_15765 PF00550 Phosphopantetheine attachment site F6X00_15770 PF00550 Phosphopantetheine attachment site F6X00_15790 PF00535 Glycosyl transferase family 2 F6X00_15795 PF00221 Aromatic amino acid lyase F6X00_15820 PF02801 Beta-ketoacyl synthase, C-terminal domain F6X00_15820 PF00109 Beta-ketoacyl synthase, N-terminal domain F6X00_15835 PF02801 Beta-ketoacyl synthase, C-terminal domain F6X00_15835 PF00109 Beta-ketoacyl synthase, N-terminal domain F6X00_15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_15845 PF18719 ArlS sensor domain F6X00_15845 PF00512 His Kinase A (phospho-acceptor) domain F6X00_15850 PF00486 Transcriptional regulatory protein, C terminal F6X00_15850 PF00072 Response regulator receiver domain F6X00_15860 PF07670 Nucleoside recognition F6X00_15860 PF07662 Na+ dependent nucleoside transporter C-terminus F6X00_15860 PF01773 Na+ dependent nucleoside transporter N-terminus F6X00_15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_15865 PF03466 LysR substrate binding domain F6X00_15870 PF13406 Transglycosylase SLT domain F6X00_15875 PF05166 YcgL domain F6X00_15880 PF05209 Septum formation inhibitor MinC, N-terminal domain F6X00_15880 PF03775 Septum formation inhibitor MinC, C-terminal domain F6X00_15885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F6X00_15890 PF03776 Septum formation topological specificity factor MinE F6X00_15895 PF01612 3'-5' exonuclease F6X00_15895 PF00570 HRDC domain F6X00_15900 PF00501 AMP-binding enzyme F6X00_15900 PF13193 AMP-binding enzyme C-terminal domain F6X00_15905 PF00561 alpha/beta hydrolase fold F6X00_15920 PF00814 Glycoprotease family F6X00_15925 PF04851 Type III restriction enzyme, res subunit F6X00_15925 PF13307 Helicase C-terminal domain F6X00_15935 PF01842 ACT domain F6X00_15935 PF00551 Formyl transferase F6X00_15940 PF06185 YecM protein F6X00_15945 PF00750 tRNA synthetases class I (R) F6X00_15945 PF03485 Arginyl tRNA synthetase N terminal domain F6X00_15945 PF05746 DALR anticodon binding domain F6X00_15965 PF07664 Ferrous iron transport protein B C terminus F6X00_15965 PF02421 Ferrous iron transport protein B F6X00_15965 PF07670 Nucleoside recognition F6X00_15970 PF04023 FeoA domain F6X00_15980 PF01297 Zinc-uptake complex component A periplasmic F6X00_15985 PF00005 ABC transporter F6X00_15990 PF00950 ABC 3 transport family F6X00_15995 PF00549 CoA-ligase F6X00_15995 PF02629 CoA binding domain F6X00_16000 PF08442 ATP-grasp domain F6X00_16000 PF00549 CoA-ligase F6X00_16005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F6X00_16005 PF02817 e3 binding domain F6X00_16005 PF00364 Biotin-requiring enzyme F6X00_16010 PF02779 Transketolase, pyrimidine binding domain F6X00_16010 PF16870 2-oxoglutarate dehydrogenase C-terminal F6X00_16010 PF16078 2-oxoglutarate dehydrogenase N-terminus F6X00_16010 PF00676 Dehydrogenase E1 component F6X00_16015 PF13085 2Fe-2S iron-sulfur cluster binding domain F6X00_16020 PF02910 Fumarate reductase flavoprotein C-term F6X00_16020 PF00890 FAD binding domain F6X00_16025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F6X00_16030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F6X00_16035 PF00285 Citrate synthase, C-terminal domain F6X00_16040 PF01784 NIF3 (NGG1p interacting factor 3) F6X00_16050 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_16050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F6X00_16055 PF00375 Sodium:dicarboxylate symporter family F6X00_16060 PF01042 Endoribonuclease L-PSP F6X00_16065 PF13309 HTH domain F6X00_16065 PF08348 YheO-like PAS domain F6X00_16070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F6X00_16070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F6X00_16070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F6X00_16070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F6X00_16075 PF03925 SeqA protein C-terminal domain F6X00_16075 PF17206 SeqA protein N-terminal domain F6X00_16080 PF12697 Alpha/beta hydrolase family F6X00_16090 PF00258 Flavodoxin F6X00_16100 PF01475 Ferric uptake regulator family F6X00_16105 PF00749 tRNA synthetases class I (E and Q), catalytic domain F6X00_16105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F6X00_16110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F6X00_16110 PF00367 phosphotransferase system, EIIB F6X00_16110 PF02378 Phosphotransferase system, EIIC F6X00_16115 PF01979 Amidohydrolase family F6X00_16120 PF01047 MarR family F6X00_16120 PF00480 ROK family F6X00_16125 PF00999 Sodium/hydrogen exchanger family F6X00_16125 PF02254 TrkA-N domain F6X00_16130 PF13537 Glutamine amidotransferase domain F6X00_16130 PF00733 Asparagine synthase F6X00_16140 PF00854 POT family F6X00_16145 PF00672 HAMP domain F6X00_16145 PF17200 Single Cache domain 2 F6X00_16145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_16150 PF00762 Ferrochelatase F6X00_16155 PF05191 Adenylate kinase, active site lid F6X00_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_16160 PF00183 Hsp90 protein F6X00_16165 PF00486 Transcriptional regulatory protein, C terminal F6X00_16170 PF17323 Trans-membrane regulatory protein ToxS F6X00_16185 PF12850 Calcineurin-like phosphoesterase superfamily domain F6X00_16200 PF07556 Protein of unknown function (DUF1538) F6X00_16205 PF07556 Protein of unknown function (DUF1538) F6X00_16210 PF08338 Domain of unknown function (DUF1731) F6X00_16210 PF01370 NAD dependent epimerase/dehydratase family F6X00_16215 PF00106 short chain dehydrogenase F6X00_16225 PF00085 Thioredoxin F6X00_16230 PF16200 C-terminal region of band_7 F6X00_16230 PF01145 SPFH domain / Band 7 family F6X00_16240 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F6X00_16245 PF13609 Gram-negative porin F6X00_16250 PF00533 BRCA1 C Terminus (BRCT) domain F6X00_16250 PF01653 NAD-dependent DNA ligase adenylation domain F6X00_16250 PF03120 NAD-dependent DNA ligase OB-fold domain F6X00_16250 PF12826 Helix-hairpin-helix motif F6X00_16250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F6X00_16255 PF04354 ZipA, C-terminal FtsZ-binding domain F6X00_16265 PF00291 Pyridoxal-phosphate dependent enzyme F6X00_16270 PF00381 PTS HPr component phosphorylation site F6X00_16275 PF02896 PEP-utilising enzyme, TIM barrel domain F6X00_16275 PF00391 PEP-utilising enzyme, mobile domain F6X00_16275 PF05524 PEP-utilising enzyme, N-terminal F6X00_16280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F6X00_16285 PF00700 Bacterial flagellin C-terminal helical region F6X00_16285 PF00669 Bacterial flagellin N-terminal helical region F6X00_16285 PF07196 Flagellin hook IN motif F6X00_16290 PF07196 Flagellin hook IN motif F6X00_16290 PF00669 Bacterial flagellin N-terminal helical region F6X00_16290 PF00700 Bacterial flagellin C-terminal helical region F6X00_16295 PF00669 Bacterial flagellin N-terminal helical region F6X00_16295 PF00700 Bacterial flagellin C-terminal helical region F6X00_16295 PF07196 Flagellin hook IN motif F6X00_16300 PF00669 Bacterial flagellin N-terminal helical region F6X00_16305 PF07196 Flagellin hook IN motif F6X00_16305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F6X00_16310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F6X00_16310 PF10135 Rod binding protein F6X00_16315 PF02119 Flagellar P-ring protein F6X00_16320 PF02107 Flagellar L-ring protein F6X00_16325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F6X00_16325 PF00460 Flagella basal body rod protein F6X00_16330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F6X00_16330 PF00460 Flagella basal body rod protein F6X00_16335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F6X00_16335 PF00460 Flagella basal body rod protein F6X00_16335 PF07559 Flagellar basal body protein FlaE F6X00_16340 PF13861 FlgD Tudor-like domain F6X00_16340 PF13860 FlgD Ig-like domain F6X00_16340 PF03963 Flagellar hook capping protein - N-terminal region F6X00_16345 PF00460 Flagella basal body rod protein F6X00_16345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F6X00_16350 PF00460 Flagella basal body rod protein F6X00_16355 PF03705 CheR methyltransferase, all-alpha domain F6X00_16355 PF01739 CheR methyltransferase, SAM binding domain F6X00_16360 PF01584 CheW-like domain F6X00_16360 PF00072 Response regulator receiver domain F6X00_16405 PF00749 tRNA synthetases class I (E and Q), catalytic domain F6X00_16415 PF13609 Gram-negative porin F6X00_16420 PF00403 Heavy-metal-associated domain F6X00_16430 PF00728 Glycosyl hydrolase family 20, catalytic domain F6X00_16430 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain F6X00_16430 PF03173 Putative carbohydrate binding domain F6X00_16430 PF02838 Glycosyl hydrolase family 20, domain 2 F6X00_16435 PF01963 TraB family F6X00_16450 PF01713 Smr domain F6X00_16455 PF00849 RNA pseudouridylate synthase F6X00_16455 PF01479 S4 domain F6X00_16460 PF04073 Aminoacyl-tRNA editing domain F6X00_16465 PF00149 Calcineurin-like phosphoesterase F6X00_16465 PF02872 5'-nucleotidase, C-terminal domain F6X00_16470 PF00793 DAHP synthetase I family F6X00_16475 PF13369 Transglutaminase-like superfamily F6X00_16480 PF04247 Invasion gene expression up-regulator, SirB F6X00_16485 PF17827 PrmC N-terminal domain F6X00_16485 PF13847 Methyltransferase domain F6X00_16490 PF03462 PCRF domain F6X00_16490 PF00472 RF-1 domain F6X00_16495 PF01488 Shikimate / quinate 5-dehydrogenase F6X00_16495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F6X00_16495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F6X00_16500 PF03550 Outer membrane lipoprotein LolB F6X00_16505 PF08544 GHMP kinases C terminal F6X00_16505 PF00288 GHMP kinases N terminal domain F6X00_16510 PF14572 Phosphoribosyl synthetase-associated domain F6X00_16510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F6X00_16515 PF01195 Peptidyl-tRNA hydrolase F6X00_16520 PF01926 50S ribosome-binding GTPase F6X00_16520 PF06071 Protein of unknown function (DUF933) F6X00_16605 PF01494 FAD binding domain F6X00_16610 PF04055 Radical SAM superfamily F6X00_16610 PF01938 TRAM domain F6X00_16610 PF00919 Uncharacterized protein family UPF0004 F6X00_16615 PF02562 PhoH-like protein F6X00_16620 PF02130 Uncharacterized protein family UPF0054 F6X00_16625 PF03471 Transporter associated domain F6X00_16625 PF00571 CBS domain F6X00_16630 PF00795 Carbon-nitrogen hydrolase F6X00_16635 PF07295 Zinc-ribbon containing domain F6X00_16640 PF13603 Leucyl-tRNA synthetase, Domain 2 F6X00_16640 PF00133 tRNA synthetases class I (I, L, M and V) F6X00_16640 PF08264 Anticodon-binding domain of tRNA F6X00_16645 PF04390 Lipopolysaccharide-assembly F6X00_16650 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F6X00_16650 PF06144 DNA polymerase III, delta subunit F6X00_16660 PF02590 Predicted SPOUT methyltransferase F6X00_16665 PF00905 Penicillin binding protein transpeptidase domain F6X00_16665 PF03717 Penicillin-binding Protein dimerisation domain F6X00_16670 PF01098 Cell cycle protein F6X00_16675 PF05036 Sporulation related domain F6X00_16675 PF03330 Lytic transglycolase F6X00_16680 PF07943 Penicillin-binding protein 5, C-terminal domain F6X00_16680 PF00768 D-alanyl-D-alanine carboxypeptidase F6X00_16685 PF04359 Protein of unknown function (DUF493) F6X00_16690 PF03099 Biotin/lipoate A/B protein ligase family F6X00_16695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F6X00_16695 PF04055 Radical SAM superfamily F6X00_16705 PF00464 Serine hydroxymethyltransferase F6X00_16735 PF00128 Alpha amylase, catalytic domain F6X00_16735 PF16657 Maltogenic Amylase, C-terminal domain F6X00_16740 PF00367 phosphotransferase system, EIIB F6X00_16740 PF02378 Phosphotransferase system, EIIC F6X00_16745 PF00356 Bacterial regulatory proteins, lacI family F6X00_16755 PF00005 ABC transporter F6X00_16755 PF09383 NIL domain F6X00_16760 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_16765 PF03180 NLPA lipoprotein F6X00_16770 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) F6X00_16775 PF07348 Syd protein (SUKH-2) F6X00_16780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F6X00_16780 PF14489 QueF-like protein F6X00_16790 PF00990 Diguanylate cyclase, GGDEF domain F6X00_16795 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F6X00_16795 PF11892 Domain of unknown function (DUF3412) F6X00_16795 PF03641 Possible lysine decarboxylase F6X00_16800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F6X00_16800 PF01367 5'-3' exonuclease, C-terminal SAM fold F6X00_16805 PF01223 DNA/RNA non-specific endonuclease F6X00_16810 PF18125 RlmM ferredoxin-like domain F6X00_16810 PF01728 FtsJ-like methyltransferase F6X00_16815 PF04241 Protein of unknown function (DUF423) F6X00_16825 PF03466 LysR substrate binding domain F6X00_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_16830 PF02568 Thiamine biosynthesis protein (ThiI) F6X00_16830 PF02926 THUMP domain F6X00_16835 PF13677 Membrane MotB of proton-channel complex MotA/MotB F6X00_16835 PF00691 OmpA family F6X00_16840 PF01618 MotA/TolQ/ExbB proton channel family F6X00_16845 PF02609 Exonuclease VII small subunit F6X00_16850 PF00348 Polyprenyl synthetase F6X00_16855 PF02780 Transketolase, C-terminal domain F6X00_16855 PF02779 Transketolase, pyrimidine binding domain F6X00_16855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F6X00_16860 PF04608 Phosphatidylglycerophosphatase A F6X00_16865 PF02769 AIR synthase related protein, C-terminal domain F6X00_16865 PF00586 AIR synthase related protein, N-terminal domain F6X00_16870 PF01029 NusB family F6X00_16875 PF00885 6,7-dimethyl-8-ribityllumazine synthase F6X00_16880 PF00925 GTP cyclohydrolase II F6X00_16880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F6X00_16885 PF00677 Lumazine binding domain F6X00_16890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F6X00_16890 PF01872 RibD C-terminal domain F6X00_16895 PF03477 ATP cone domain F6X00_16900 PF00171 Aldehyde dehydrogenase family F6X00_16905 PF00696 Amino acid kinase family F6X00_16905 PF01472 PUA domain F6X00_16910 PF07417 Sigma factor-binding transcriptional regulator Crl F6X00_16920 PF00156 Phosphoribosyl transferase domain F6X00_16925 PF00860 Permease family F6X00_16930 PF07687 Peptidase dimerisation domain F6X00_16930 PF01546 Peptidase family M20/M25/M40 F6X00_16950 PF12849 PBP superfamily domain F6X00_16955 PF00194 Eukaryotic-type carbonic anhydrase F6X00_16960 PF00924 Mechanosensitive ion channel F6X00_16970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_16970 PF00672 HAMP domain F6X00_16975 PF12945 Flagellar protein YcgR F6X00_16975 PF07238 PilZ domain F6X00_16985 PF13302 Acetyltransferase (GNAT) domain F6X00_16990 PF07676 WD40-like Beta Propeller Repeat F6X00_16990 PF03572 Peptidase family S41 F6X00_16990 PF14684 Tricorn protease C1 domain F6X00_16990 PF14685 Tricorn protease PDZ domain F6X00_17005 PF00005 ABC transporter F6X00_17005 PF12558 ATP-binding cassette cobalt transporter F6X00_17010 PF07155 ECF-type riboflavin transporter, S component F6X00_17015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_17015 PF00529 HlyD membrane-fusion protein of T1SS F6X00_17020 PF11742 Protein of unknown function (DUF3302) F6X00_17025 PF00990 Diguanylate cyclase, GGDEF domain F6X00_17040 PF01048 Phosphorylase superfamily F6X00_17045 PF08349 Protein of unknown function (DUF1722) F6X00_17050 PF13411 MerR HTH family regulatory protein F6X00_17055 PF00875 DNA photolyase F6X00_17055 PF03441 FAD binding domain of DNA photolyase F6X00_17060 PF17969 L,D-transpeptidase C-terminal domain F6X00_17060 PF01476 LysM domain F6X00_17060 PF03734 L,D-transpeptidase catalytic domain F6X00_17070 PF00270 DEAD/DEAH box helicase F6X00_17070 PF00271 Helicase conserved C-terminal domain F6X00_17075 PF00326 Prolyl oligopeptidase family F6X00_17075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F6X00_17080 PF00593 TonB dependent receptor F6X00_17080 PF07715 TonB-dependent Receptor Plug Domain F6X00_17080 PF04886 PT repeat F6X00_17100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17100 PF02743 Cache domain F6X00_17100 PF00672 HAMP domain F6X00_17105 PF12729 Four helix bundle sensory module for signal transduction F6X00_17105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17105 PF00672 HAMP domain F6X00_17110 PF12849 PBP superfamily domain F6X00_17115 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17120 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17125 PF00005 ABC transporter F6X00_17130 PF00360 Phytochrome region F6X00_17130 PF00990 Diguanylate cyclase, GGDEF domain F6X00_17130 PF00563 EAL domain F6X00_17130 PF01590 GAF domain F6X00_17140 PF00092 von Willebrand factor type A domain F6X00_17140 PF07584 Aerotolerance regulator N-terminal F6X00_17155 PF01882 Protein of unknown function DUF58 F6X00_17160 PF07726 ATPase family associated with various cellular activities (AAA) F6X00_17160 PF17863 AAA lid domain F6X00_17165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17165 PF02743 Cache domain F6X00_17165 PF00672 HAMP domain F6X00_17175 PF00196 Bacterial regulatory proteins, luxR family F6X00_17180 PF00196 Bacterial regulatory proteins, luxR family F6X00_17190 PF00005 ABC transporter F6X00_17190 PF00664 ABC transporter transmembrane region F6X00_17195 PF00529 HlyD membrane-fusion protein of T1SS F6X00_17210 PF13439 Glycosyltransferase Family 4 F6X00_17210 PF00534 Glycosyl transferases group 1 F6X00_17220 PF13439 Glycosyltransferase Family 4 F6X00_17220 PF00534 Glycosyl transferases group 1 F6X00_17225 PF13807 G-rich domain on putative tyrosine kinase F6X00_17225 PF13614 AAA domain F6X00_17225 PF02706 Chain length determinant protein F6X00_17230 PF10531 SLBB domain F6X00_17230 PF02563 Polysaccharide biosynthesis/export protein F6X00_17240 PF02397 Bacterial sugar transferase F6X00_17245 PF00005 ABC transporter F6X00_17245 PF08402 TOBE domain F6X00_17255 PF01547 Bacterial extracellular solute-binding protein F6X00_17260 PF14785 Maltose transport system permease protein MalF P2 domain F6X00_17260 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17265 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17295 PF05661 Protein of unknown function (DUF808) F6X00_17300 PF17151 Periplasmic sensor domain F6X00_17300 PF00990 Diguanylate cyclase, GGDEF domain F6X00_17305 PF01979 Amidohydrolase family F6X00_17310 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_17310 PF03473 MOSC domain F6X00_17310 PF03476 MOSC N-terminal beta barrel domain F6X00_17310 PF03473 MOSC domain F6X00_17310 PF03476 MOSC N-terminal beta barrel domain F6X00_17310 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_17315 PF02540 NAD synthase F6X00_17360 PF13006 Insertion element 4 transposase N-terminal F6X00_17360 PF01609 Transposase DDE domain F6X00_17365 PF00005 ABC transporter F6X00_17370 PF01032 FecCD transport family F6X00_17380 PF02472 Biopolymer transport protein ExbD/TolR F6X00_17385 PF01618 MotA/TolQ/ExbB proton channel family F6X00_17390 PF03544 Gram-negative bacterial TonB protein C-terminal F6X00_17395 PF04055 Radical SAM superfamily F6X00_17400 PF06228 Haem utilisation ChuX/HutX F6X00_17405 PF01243 Pyridoxamine 5'-phosphate oxidase F6X00_17415 PF01584 CheW-like domain F6X00_17415 PF00072 Response regulator receiver domain F6X00_17425 PF00582 Universal stress protein family F6X00_17430 PF00128 Alpha amylase, catalytic domain F6X00_17435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17435 PF00672 HAMP domain F6X00_17435 PF02743 Cache domain F6X00_17440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17440 PF00672 HAMP domain F6X00_17440 PF02743 Cache domain F6X00_17475 PF08525 Opacity-associated protein A N-terminal motif F6X00_17475 PF01476 LysM domain F6X00_17475 PF01551 Peptidase family M23 F6X00_17480 PF13419 Haloacid dehalogenase-like hydrolase F6X00_17495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F6X00_17495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F6X00_17520 PF07662 Na+ dependent nucleoside transporter C-terminus F6X00_17520 PF07670 Nucleoside recognition F6X00_17520 PF01773 Na+ dependent nucleoside transporter N-terminus F6X00_17535 PF00563 EAL domain F6X00_17535 PF00990 Diguanylate cyclase, GGDEF domain F6X00_17535 PF03707 Bacterial signalling protein N terminal repeat F6X00_17540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17540 PF12729 Four helix bundle sensory module for signal transduction F6X00_17540 PF00672 HAMP domain F6X00_17555 PF00990 Diguanylate cyclase, GGDEF domain F6X00_17560 PF01625 Peptide methionine sulfoxide reductase F6X00_17560 PF01641 SelR domain F6X00_17565 PF02566 OsmC-like protein F6X00_17595 PF02566 OsmC-like protein F6X00_17600 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal F6X00_17600 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_17600 PF14602 Hexapeptide repeat of succinyl-transferase F6X00_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_17615 PF03466 LysR substrate binding domain F6X00_17620 PF13419 Haloacid dehalogenase-like hydrolase F6X00_17635 PF00672 HAMP domain F6X00_17635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17645 PF00155 Aminotransferase class I and II F6X00_17650 PF12833 Helix-turn-helix domain F6X00_17650 PF01497 Periplasmic binding protein F6X00_17655 PF13419 Haloacid dehalogenase-like hydrolase F6X00_17665 PF00266 Aminotransferase class-V F6X00_17675 PF00005 ABC transporter F6X00_17680 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17685 PF07702 UTRA domain F6X00_17685 PF00392 Bacterial regulatory proteins, gntR family F6X00_17695 PF01266 FAD dependent oxidoreductase F6X00_17700 PF03466 LysR substrate binding domain F6X00_17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_17710 PF00854 POT family F6X00_17715 PF03313 Serine dehydratase alpha chain F6X00_17715 PF03315 Serine dehydratase beta chain F6X00_17735 PF07943 Penicillin-binding protein 5, C-terminal domain F6X00_17735 PF00768 D-alanyl-D-alanine carboxypeptidase F6X00_17755 PF13977 BetI-type transcriptional repressor, C-terminal F6X00_17755 PF00440 Bacterial regulatory proteins, tetR family F6X00_17760 PF00171 Aldehyde dehydrogenase family F6X00_17765 PF05199 GMC oxidoreductase F6X00_17765 PF00732 GMC oxidoreductase F6X00_17770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F6X00_17775 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_17780 PF00005 ABC transporter F6X00_17780 PF00571 CBS domain F6X00_17785 PF04224 Protein of unknown function, DUF417 F6X00_17795 PF00391 PEP-utilising enzyme, mobile domain F6X00_17795 PF02896 PEP-utilising enzyme, TIM barrel domain F6X00_17795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F6X00_17800 PF03618 Kinase/pyrophosphorylase F6X00_17820 PF04324 BFD-like [2Fe-2S] binding domain F6X00_17820 PF01266 FAD dependent oxidoreductase F6X00_17825 PF00890 FAD binding domain F6X00_17830 PF02754 Cysteine-rich domain F6X00_17830 PF13183 4Fe-4S dicluster domain F6X00_17835 PF13419 Haloacid dehalogenase-like hydrolase F6X00_17845 PF02016 LD-carboxypeptidase N-terminal domain F6X00_17845 PF17676 LD-carboxypeptidase C-terminal domain F6X00_17850 PF07995 Glucose / Sorbosone dehydrogenase F6X00_17860 PF00465 Iron-containing alcohol dehydrogenase F6X00_17865 PF00012 Hsp70 protein F6X00_17870 PF00581 Rhodanese-like domain F6X00_17895 PF13533 Biotin-lipoyl like F6X00_17900 PF00873 AcrB/AcrD/AcrF family F6X00_17905 PF13194 Domain of unknown function (DUF4010) F6X00_17910 PF02868 Thermolysin metallopeptidase, alpha-helical domain F6X00_17910 PF03413 Peptidase propeptide and YPEB domain F6X00_17910 PF01447 Thermolysin metallopeptidase, catalytic domain F6X00_17910 PF07504 Fungalysin/Thermolysin Propeptide Motif F6X00_17930 PF03222 Tryptophan/tyrosine permease family F6X00_17935 PF00149 Calcineurin-like phosphoesterase F6X00_17945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_17945 PF02743 Cache domain F6X00_17945 PF00672 HAMP domain F6X00_17955 PF18416 N-acetylglucosamine binding protein domain 2 F6X00_17955 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F6X00_17960 PF00892 EamA-like transporter family F6X00_17975 PF01569 PAP2 superfamily F6X00_17985 PF03606 C4-dicarboxylate anaerobic carrier F6X00_17990 PF00171 Aldehyde dehydrogenase family F6X00_17995 PF00034 Cytochrome c F6X00_18000 PF01212 Beta-eliminating lyase F6X00_18010 PF12592 Protein of unknown function (DUF3763) F6X00_18010 PF07728 AAA domain (dynein-related subfamily) F6X00_18010 PF17868 AAA lid domain F6X00_18015 PF05762 VWA domain containing CoxE-like protein F6X00_18020 PF04237 YjbR F6X00_18035 PF05025 RbsD / FucU transport protein family F6X00_18040 PF00005 ABC transporter F6X00_18045 PF02653 Branched-chain amino acid transport system / permease component F6X00_18050 PF13407 Periplasmic binding protein domain F6X00_18055 PF00294 pfkB family carbohydrate kinase F6X00_18060 PF00356 Bacterial regulatory proteins, lacI family F6X00_18070 PF00072 Response regulator receiver domain F6X00_18070 PF01584 CheW-like domain F6X00_18080 PF00583 Acetyltransferase (GNAT) family F6X00_18085 PF01926 50S ribosome-binding GTPase F6X00_18090 PF12729 Four helix bundle sensory module for signal transduction F6X00_18090 PF00672 HAMP domain F6X00_18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_18095 PF01740 STAS domain F6X00_18095 PF08678 Rsbr N terminal F6X00_18105 PF13581 Histidine kinase-like ATPase domain F6X00_18115 PF00072 Response regulator receiver domain F6X00_18115 PF01627 Hpt domain F6X00_18115 PF00512 His Kinase A (phospho-acceptor) domain F6X00_18115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_18115 PF00672 HAMP domain F6X00_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_18120 PF00072 Response regulator receiver domain F6X00_18125 PF12320 Type 5 capsule protein repressor C-terminal domain F6X00_18125 PF00149 Calcineurin-like phosphoesterase F6X00_18130 PF13476 AAA domain F6X00_18140 PF03466 LysR substrate binding domain F6X00_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_18160 PF13629 Pilus formation protein N terminal region F6X00_18160 PF00263 Bacterial type II and III secretion system protein F6X00_18160 PF04972 BON domain F6X00_18175 PF00437 Type II/IV secretion system protein F6X00_18245 PF00939 Sodium:sulfate symporter transmembrane region F6X00_18250 PF17203 Single cache domain 3 F6X00_18250 PF00989 PAS fold F6X00_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_18250 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F6X00_18255 PF12431 Transcriptional regulator F6X00_18255 PF00072 Response regulator receiver domain F6X00_18260 PF12464 Maltose acetyltransferase F6X00_18260 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_18280 PF01032 FecCD transport family F6X00_18285 PF01032 FecCD transport family F6X00_18290 PF00005 ABC transporter F6X00_18295 PF13411 MerR HTH family regulatory protein F6X00_18325 PF12805 FUSC-like inner membrane protein yccS F6X00_18330 PF13361 UvrD-like helicase C-terminal domain F6X00_18330 PF00580 UvrD/REP helicase N-terminal domain F6X00_18330 PF12462 DNA helicase IV / RNA helicase N terminal F6X00_18335 PF02142 MGS-like domain F6X00_18340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F6X00_18345 PF17149 Periplasmic sensor domain found in signal transduction proteins F6X00_18345 PF00672 HAMP domain F6X00_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_18345 PF00512 His Kinase A (phospho-acceptor) domain F6X00_18345 PF01627 Hpt domain F6X00_18345 PF00072 Response regulator receiver domain F6X00_18365 PF03781 Sulfatase-modifying factor enzyme 1 F6X00_18370 PF03264 NapC/NirT cytochrome c family, N-terminal region F6X00_18385 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) F6X00_18390 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB F6X00_18395 PF03880 DbpA RNA binding domain F6X00_18395 PF00270 DEAD/DEAH box helicase F6X00_18395 PF00271 Helicase conserved C-terminal domain F6X00_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_18400 PF00512 His Kinase A (phospho-acceptor) domain F6X00_18400 PF09456 RcsC Alpha-Beta-Loop (ABL) F6X00_18400 PF00072 Response regulator receiver domain F6X00_18405 PF00990 Diguanylate cyclase, GGDEF domain F6X00_18405 PF00498 FHA domain F6X00_18405 PF00563 EAL domain F6X00_18420 PF03707 Bacterial signalling protein N terminal repeat F6X00_18420 PF00563 EAL domain F6X00_18420 PF00990 Diguanylate cyclase, GGDEF domain F6X00_18430 PF12849 PBP superfamily domain F6X00_18440 PF12833 Helix-turn-helix domain F6X00_18445 PF00773 RNB domain F6X00_18445 PF00575 S1 RNA binding domain F6X00_18445 PF08206 Ribonuclease B OB domain F6X00_18450 PF00271 Helicase conserved C-terminal domain F6X00_18450 PF03880 DbpA RNA binding domain F6X00_18450 PF00270 DEAD/DEAH box helicase F6X00_18455 PF00871 Acetokinase family F6X00_18490 PF13358 DDE superfamily endonuclease F6X00_18510 PF00990 Diguanylate cyclase, GGDEF domain F6X00_18655 PF00580 UvrD/REP helicase N-terminal domain F6X00_18655 PF12462 DNA helicase IV / RNA helicase N terminal F6X00_18655 PF13361 UvrD-like helicase C-terminal domain F6X00_18670 PF13657 HipA N-terminal domain F6X00_18670 PF07804 HipA-like C-terminal domain F6X00_18675 PF00884 Sulfatase F6X00_18680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_18680 PF03466 LysR substrate binding domain F6X00_18685 PF00884 Sulfatase F6X00_18690 PF04055 Radical SAM superfamily F6X00_18690 PF13186 Iron-sulfur cluster-binding domain F6X00_18695 PF17863 AAA lid domain F6X00_18695 PF07726 ATPase family associated with various cellular activities (AAA) F6X00_18710 PF00092 von Willebrand factor type A domain F6X00_18725 PF03466 LysR substrate binding domain F6X00_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_18730 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase F6X00_18735 PF03781 Sulfatase-modifying factor enzyme 1 F6X00_18740 PF13186 Iron-sulfur cluster-binding domain F6X00_18740 PF04055 Radical SAM superfamily F6X00_18750 PF08774 VRR-NUC domain F6X00_18750 PF18081 Fanconi anemia-associated nuclease SAP domain F6X00_18770 PF07690 Major Facilitator Superfamily F6X00_18775 PF13533 Biotin-lipoyl like F6X00_18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_18805 PF03466 LysR substrate binding domain F6X00_18810 PF02627 Carboxymuconolactone decarboxylase family F6X00_18825 PF00795 Carbon-nitrogen hydrolase F6X00_18835 PF00005 ABC transporter F6X00_18835 PF00664 ABC transporter transmembrane region F6X00_18845 PF02347 Glycine cleavage system P-protein F6X00_18850 PF01597 Glycine cleavage H-protein F6X00_18855 PF00464 Serine hydroxymethyltransferase F6X00_18865 PF08669 Glycine cleavage T-protein C-terminal barrel domain F6X00_18865 PF01571 Aminomethyltransferase folate-binding domain F6X00_18890 PF00873 AcrB/AcrD/AcrF family F6X00_18900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F6X00_18900 PF02378 Phosphotransferase system, EIIC F6X00_18905 PF00294 pfkB family carbohydrate kinase F6X00_18910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_18910 PF00381 PTS HPr component phosphorylation site F6X00_18915 PF00356 Bacterial regulatory proteins, lacI family F6X00_18915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F6X00_18940 PF00224 Pyruvate kinase, barrel domain F6X00_18940 PF02887 Pyruvate kinase, alpha/beta domain F6X00_18945 PF07690 Major Facilitator Superfamily F6X00_18955 PF02743 Cache domain F6X00_18955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_18955 PF00512 His Kinase A (phospho-acceptor) domain F6X00_18960 PF14532 Sigma-54 interaction domain F6X00_18960 PF02954 Bacterial regulatory protein, Fis family F6X00_18960 PF00072 Response regulator receiver domain F6X00_18965 PF00465 Iron-containing alcohol dehydrogenase F6X00_18970 PF06719 AraC-type transcriptional regulator N-terminus F6X00_18970 PF12833 Helix-turn-helix domain F6X00_18975 PF06483 Chitinase C F6X00_18975 PF00704 Glycosyl hydrolases family 18 F6X00_18980 PF00483 Nucleotidyl transferase F6X00_18985 PF01268 Formate--tetrahydrofolate ligase F6X00_18990 PF00294 pfkB family carbohydrate kinase F6X00_19010 PF13419 Haloacid dehalogenase-like hydrolase F6X00_19020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_19020 PF00672 HAMP domain F6X00_19025 PF04336 Acyl carrier protein phosphodiesterase F6X00_19030 PF00270 DEAD/DEAH box helicase F6X00_19030 PF00271 Helicase conserved C-terminal domain F6X00_19045 PF01292 Prokaryotic cytochrome b561 F6X00_19050 PF04264 YceI-like domain F6X00_19055 PF01226 Formate/nitrite transporter F6X00_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_19060 PF03466 LysR substrate binding domain F6X00_19065 PF06496 Protein of unknown function (DUF1097) F6X00_19070 PF11398 Protein of unknown function (DUF2813) F6X00_19075 PF02872 5'-nucleotidase, C-terminal domain F6X00_19075 PF00149 Calcineurin-like phosphoesterase F6X00_19080 PF03741 Integral membrane protein TerC family F6X00_19090 PF00892 EamA-like transporter family F6X00_19095 PF00491 Arginase family F6X00_19110 PF12262 Bacterial virulence factor lipase N-terminal F6X00_19115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F6X00_19130 PF03061 Thioesterase superfamily F6X00_19140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_19140 PF12793 Sugar transport-related sRNA regulator N-term F6X00_19150 PF16657 Maltogenic Amylase, C-terminal domain F6X00_19150 PF00128 Alpha amylase, catalytic domain F6X00_19155 PF03466 LysR substrate binding domain F6X00_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_19175 PF00684 DnaJ central domain F6X00_19175 PF01556 DnaJ C terminal domain F6X00_19175 PF00226 DnaJ domain F6X00_19190 PF00563 EAL domain F6X00_19190 PF00990 Diguanylate cyclase, GGDEF domain F6X00_19190 PF00498 FHA domain F6X00_19195 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F6X00_19195 PF07055 Enoyl reductase FAD binding domain F6X00_19195 PF12241 Trans-2-enoyl-CoA reductase catalytic region F6X00_19200 PF13472 GDSL-like Lipase/Acylhydrolase family F6X00_19205 PF00005 ABC transporter F6X00_19215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F6X00_19215 PF01266 FAD dependent oxidoreductase F6X00_19220 PF02626 Carboxyltransferase domain, subdomain A and B F6X00_19225 PF02682 Carboxyltransferase domain, subdomain C and D F6X00_19230 PF03746 LamB/YcsF family F6X00_19240 PF00563 EAL domain F6X00_19240 PF08448 PAS fold F6X00_19240 PF08447 PAS fold F6X00_19240 PF00990 Diguanylate cyclase, GGDEF domain F6X00_19240 PF13426 PAS domain F6X00_19240 PF05231 MASE1 F6X00_19245 PF07715 TonB-dependent Receptor Plug Domain F6X00_19245 PF00593 TonB dependent receptor F6X00_19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_19250 PF03466 LysR substrate binding domain F6X00_19255 PF13380 CoA binding domain F6X00_19255 PF00583 Acetyltransferase (GNAT) family F6X00_19255 PF13607 Succinyl-CoA ligase like flavodoxin domain F6X00_19260 PF05036 Sporulation related domain F6X00_19265 PF07478 D-ala D-ala ligase C-terminus F6X00_19265 PF01820 D-ala D-ala ligase N-terminus F6X00_19275 PF01253 Translation initiation factor SUI1 F6X00_19615 PF03701 Uncharacterised protein family (UPF0181) F6X00_19630 PF00486 Transcriptional regulatory protein, C terminal F6X00_19630 PF00072 Response regulator receiver domain F6X00_19640 PF02233 NAD(P) transhydrogenase beta subunit F6X00_19645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F6X00_19645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F6X00_19645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F6X00_19660 PF00990 Diguanylate cyclase, GGDEF domain F6X00_19670 PF00486 Transcriptional regulatory protein, C terminal F6X00_19670 PF00072 Response regulator receiver domain F6X00_19680 PF01047 MarR family F6X00_19685 PF00892 EamA-like transporter family F6X00_19690 PF03459 TOBE domain F6X00_19690 PF00005 ABC transporter F6X00_19695 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_19705 PF07685 CobB/CobQ-like glutamine amidotransferase domain F6X00_19705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F6X00_19720 PF08443 RimK-like ATP-grasp domain F6X00_19720 PF18030 RimK PreATP-grasp domain F6X00_19725 PF00155 Aminotransferase class I and II F6X00_19730 PF12729 Four helix bundle sensory module for signal transduction F6X00_19730 PF00672 HAMP domain F6X00_19730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_19740 PF03477 ATP cone domain F6X00_19740 PF13597 Anaerobic ribonucleoside-triphosphate reductase F6X00_19750 PF00873 AcrB/AcrD/AcrF family F6X00_19765 PF04143 Sulphur transport F6X00_19780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F6X00_19780 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_19795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F6X00_19795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F6X00_19800 PF00085 Thioredoxin F6X00_19805 PF07690 Major Facilitator Superfamily F6X00_19810 PF12833 Helix-turn-helix domain F6X00_19815 PF01554 MatE F6X00_19820 PF11756 Nitrous oxide-stimulated promoter F6X00_19830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_19830 PF17200 Single Cache domain 2 F6X00_19830 PF00672 HAMP domain F6X00_19835 PF03605 Anaerobic c4-dicarboxylate membrane transporter F6X00_19850 PF02472 Biopolymer transport protein ExbD/TolR F6X00_19855 PF01618 MotA/TolQ/ExbB proton channel family F6X00_19860 PF01618 MotA/TolQ/ExbB proton channel family F6X00_19880 PF14824 Sirohaem biosynthesis protein central F6X00_19880 PF10414 Sirohaem synthase dimerisation region F6X00_19880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F6X00_19890 PF13806 Rieske-like [2Fe-2S] domain F6X00_19895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F6X00_19895 PF04324 BFD-like [2Fe-2S] binding domain F6X00_19895 PF18267 Rubredoxin NAD+ reductase C-terminal domain F6X00_19895 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_19895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F6X00_19900 PF00672 HAMP domain F6X00_19900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_19920 PF01575 MaoC like domain F6X00_19925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_19925 PF00072 Response regulator receiver domain F6X00_19925 PF01627 Hpt domain F6X00_19925 PF00512 His Kinase A (phospho-acceptor) domain F6X00_19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_19925 PF00672 HAMP domain F6X00_19930 PF03705 CheR methyltransferase, all-alpha domain F6X00_19930 PF01739 CheR methyltransferase, SAM binding domain F6X00_19935 PF01339 CheB methylesterase F6X00_19940 PF00563 EAL domain F6X00_19940 PF01590 GAF domain F6X00_19940 PF00990 Diguanylate cyclase, GGDEF domain F6X00_19940 PF00360 Phytochrome region F6X00_19950 PF00491 Arginase family F6X00_19955 PF00271 Helicase conserved C-terminal domain F6X00_19955 PF00270 DEAD/DEAH box helicase F6X00_19965 PF02492 CobW/HypB/UreG, nucleotide-binding domain F6X00_19965 PF07683 Cobalamin synthesis protein cobW C-terminal domain F6X00_19975 PF00990 Diguanylate cyclase, GGDEF domain F6X00_19990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F6X00_19990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F6X00_19990 PF18267 Rubredoxin NAD+ reductase C-terminal domain F6X00_19990 PF04324 BFD-like [2Fe-2S] binding domain F6X00_19990 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_19990 PF13806 Rieske-like [2Fe-2S] domain F6X00_19995 PF00005 ABC transporter F6X00_20000 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_20005 PF00005 ABC transporter F6X00_20020 PF01738 Dienelactone hydrolase family F6X00_20025 PF00591 Glycosyl transferase family, a/b domain F6X00_20025 PF02885 Glycosyl transferase family, helical bundle domain F6X00_20030 PF10414 Sirohaem synthase dimerisation region F6X00_20030 PF14824 Sirohaem biosynthesis protein central F6X00_20030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F6X00_20035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F6X00_20035 PF00384 Molybdopterin oxidoreductase F6X00_20035 PF04324 BFD-like [2Fe-2S] binding domain F6X00_20035 PF01568 Molydopterin dinucleotide binding domain F6X00_20040 PF00583 Acetyltransferase (GNAT) family F6X00_20040 PF00814 Glycoprotease family F6X00_20045 PF00128 Alpha amylase, catalytic domain F6X00_20050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_20050 PF00672 HAMP domain F6X00_20055 PF00672 HAMP domain F6X00_20055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_20065 PF00652 Ricin-type beta-trefoil lectin domain F6X00_20065 PF07968 Leukocidin/Hemolysin toxin family F6X00_20070 PF07690 Major Facilitator Superfamily F6X00_20075 PF03009 Glycerophosphoryl diester phosphodiesterase family F6X00_20080 PF01523 Putative modulator of DNA gyrase F6X00_20085 PF01523 Putative modulator of DNA gyrase F6X00_20090 PF07963 Prokaryotic N-terminal methylation motif F6X00_20090 PF08334 Type II secretion system (T2SS), protein G F6X00_20095 PF03606 C4-dicarboxylate anaerobic carrier F6X00_20100 PF04011 LemA family F6X00_20105 PF01435 Peptidase family M48 F6X00_20115 PF03527 RHS protein F6X00_20130 PF03527 RHS protein F6X00_20180 PF04717 Type VI secretion system, phage-baseplate injector F6X00_20190 PF00004 ATPase family associated with various cellular activities (AAA) F6X00_20190 PF10431 C-terminal, D2-small domain, of ClpB protein F6X00_20190 PF17871 AAA lid domain F6X00_20190 PF07724 AAA domain (Cdc48 subfamily) F6X00_20250 PF13677 Membrane MotB of proton-channel complex MotA/MotB F6X00_20250 PF00691 OmpA family F6X00_20270 PF03793 PASTA domain F6X00_20270 PF00069 Protein kinase domain F6X00_20290 PF12843 Putative quorum-sensing-regulated virulence factor F6X00_20305 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20305 PF00563 EAL domain F6X00_20305 PF03707 Bacterial signalling protein N terminal repeat F6X00_20310 PF01329 Pterin 4 alpha carbinolamine dehydratase F6X00_20315 PF00351 Biopterin-dependent aromatic amino acid hydroxylase F6X00_20320 PF00501 AMP-binding enzyme F6X00_20320 PF13193 AMP-binding enzyme C-terminal domain F6X00_20330 PF03466 LysR substrate binding domain F6X00_20330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_20340 PF00892 EamA-like transporter family F6X00_20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_20355 PF00512 His Kinase A (phospho-acceptor) domain F6X00_20355 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_20360 PF11849 Domain of unknown function (DUF3369) F6X00_20370 PF00962 Adenosine/AMP deaminase F6X00_20375 PF00676 Dehydrogenase E1 component F6X00_20380 PF02780 Transketolase, C-terminal domain F6X00_20380 PF02779 Transketolase, pyrimidine binding domain F6X00_20385 PF02817 e3 binding domain F6X00_20385 PF00364 Biotin-requiring enzyme F6X00_20385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F6X00_20390 PF00766 Electron transfer flavoprotein FAD-binding domain F6X00_20390 PF01012 Electron transfer flavoprotein domain F6X00_20395 PF01012 Electron transfer flavoprotein domain F6X00_20405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_20405 PF00672 HAMP domain F6X00_20410 PF01168 Alanine racemase, N-terminal domain F6X00_20410 PF00842 Alanine racemase, C-terminal domain F6X00_20415 PF11647 Membrane Localization Domain F6X00_20415 PF07634 RtxA repeat F6X00_20415 PF12146 Serine aminopeptidase, S33 F6X00_20415 PF16671 Actin cross-linking domain F6X00_20415 PF11713 Peptidase C80 family F6X00_20420 PF02794 RTX toxin acyltransferase family F6X00_20430 PF00664 ABC transporter transmembrane region F6X00_20430 PF03412 Peptidase C39 family F6X00_20430 PF00005 ABC transporter F6X00_20440 PF00664 ABC transporter transmembrane region F6X00_20440 PF00005 ABC transporter F6X00_20440 PF03412 Peptidase C39 family F6X00_20465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F6X00_20465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F6X00_20470 PF00378 Enoyl-CoA hydratase/isomerase F6X00_20475 PF00378 Enoyl-CoA hydratase/isomerase F6X00_20480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F6X00_20480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F6X00_20480 PF02770 Acyl-CoA dehydrogenase, middle domain F6X00_20485 PF00171 Aldehyde dehydrogenase family F6X00_20490 PF02803 Thiolase, C-terminal domain F6X00_20490 PF00108 Thiolase, N-terminal domain F6X00_20495 PF09278 MerR, DNA binding F6X00_20495 PF00376 MerR family regulatory protein F6X00_20500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F6X00_20500 PF02770 Acyl-CoA dehydrogenase, middle domain F6X00_20500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F6X00_20505 PF01039 Carboxyl transferase domain F6X00_20510 PF00378 Enoyl-CoA hydratase/isomerase F6X00_20515 PF00682 HMGL-like F6X00_20520 PF00578 AhpC/TSA family F6X00_20520 PF10417 C-terminal domain of 1-Cys peroxiredoxin F6X00_20525 PF07992 Pyridine nucleotide-disulphide oxidoreductase F6X00_20525 PF13192 Thioredoxin domain F6X00_20530 PF00313 'Cold-shock' DNA-binding domain F6X00_20540 PF01699 Sodium/calcium exchanger protein F6X00_20545 PF16925 Tetracyclin repressor-like, C-terminal domain F6X00_20545 PF00440 Bacterial regulatory proteins, tetR family F6X00_20550 PF00107 Zinc-binding dehydrogenase F6X00_20550 PF16884 N-terminal domain of oxidoreductase F6X00_20565 PF07690 Major Facilitator Superfamily F6X00_20570 PF00196 Bacterial regulatory proteins, luxR family F6X00_20570 PF00072 Response regulator receiver domain F6X00_20575 PF05231 MASE1 F6X00_20575 PF07730 Histidine kinase F6X00_20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_20580 PF07690 Major Facilitator Superfamily F6X00_20585 PF01238 Phosphomannose isomerase type I F6X00_20595 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20605 PF03889 Alternative ribosome-rescue factor A F6X00_20610 PF00313 'Cold-shock' DNA-binding domain F6X00_20640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F6X00_20640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F6X00_20645 PF13419 Haloacid dehalogenase-like hydrolase F6X00_20650 PF12729 Four helix bundle sensory module for signal transduction F6X00_20650 PF00672 HAMP domain F6X00_20650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_20655 PF00873 AcrB/AcrD/AcrF family F6X00_20660 PF13533 Biotin-lipoyl like F6X00_20665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F6X00_20670 PF01546 Peptidase family M20/M25/M40 F6X00_20670 PF07687 Peptidase dimerisation domain F6X00_20680 PF00248 Aldo/keto reductase family F6X00_20695 PF00654 Voltage gated chloride channel F6X00_20705 PF01566 Natural resistance-associated macrophage protein F6X00_20710 PF01227 GTP cyclohydrolase I F6X00_20715 PF03453 MoeA N-terminal region (domain I and II) F6X00_20715 PF00994 Probable molybdopterin binding domain F6X00_20715 PF03454 MoeA C-terminal region (domain IV) F6X00_20720 PF00899 ThiF family F6X00_20730 PF00581 Rhodanese-like domain F6X00_20735 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20735 PF03707 Bacterial signalling protein N terminal repeat F6X00_20735 PF00563 EAL domain F6X00_20740 PF08329 Chitinase A, N-terminal domain F6X00_20740 PF00704 Glycosyl hydrolases family 18 F6X00_20750 PF00923 Transaldolase/Fructose-6-phosphate aldolase F6X00_20755 PF00456 Transketolase, thiamine diphosphate binding domain F6X00_20755 PF02779 Transketolase, pyrimidine binding domain F6X00_20755 PF02780 Transketolase, C-terminal domain F6X00_20765 PF00563 EAL domain F6X00_20765 PF03707 Bacterial signalling protein N terminal repeat F6X00_20765 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20770 PF08447 PAS fold F6X00_20770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_20775 PF00793 DAHP synthetase I family F6X00_20780 PF13488 Glycine zipper F6X00_20780 PF00691 OmpA family F6X00_20785 PF01040 UbiA prenyltransferase family F6X00_20790 PF02628 Cytochrome oxidase assembly protein F6X00_20810 PF00510 Cytochrome c oxidase subunit III F6X00_20815 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 F6X00_20820 PF00115 Cytochrome C and Quinol oxidase polypeptide I F6X00_20825 PF02790 Cytochrome C oxidase subunit II, transmembrane domain F6X00_20825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F6X00_20830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F6X00_20830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F6X00_20830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F6X00_20830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F6X00_20840 PF01810 LysE type translocator F6X00_20860 PF01557 Fumarylacetoacetate (FAA) hydrolase family F6X00_20865 PF01047 MarR family F6X00_20870 PF02566 OsmC-like protein F6X00_20880 PF00578 AhpC/TSA family F6X00_20890 PF00563 EAL domain F6X00_20890 PF03707 Bacterial signalling protein N terminal repeat F6X00_20890 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20895 PF00892 EamA-like transporter family F6X00_20900 PF00462 Glutaredoxin F6X00_20910 PF07690 Major Facilitator Superfamily F6X00_20915 PF03466 LysR substrate binding domain F6X00_20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_20920 PF00563 EAL domain F6X00_20920 PF01590 GAF domain F6X00_20920 PF00990 Diguanylate cyclase, GGDEF domain F6X00_20920 PF00360 Phytochrome region F6X00_20925 PF01042 Endoribonuclease L-PSP F6X00_20935 PF02838 Glycosyl hydrolase family 20, domain 2 F6X00_20935 PF00728 Glycosyl hydrolase family 20, catalytic domain F6X00_20940 PF00474 Sodium:solute symporter family F6X00_20950 PF07969 Amidohydrolase family F6X00_20960 PF02685 Glucokinase F6X00_20960 PF01380 SIS domain F6X00_20960 PF01418 Helix-turn-helix domain, rpiR family F6X00_20970 PF00005 ABC transporter F6X00_20980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F6X00_20990 PF12706 Beta-lactamase superfamily domain F6X00_21005 PF01047 MarR family F6X00_21020 PF00270 DEAD/DEAH box helicase F6X00_21020 PF00271 Helicase conserved C-terminal domain F6X00_21030 PF00132 Bacterial transferase hexapeptide (six repeats) F6X00_21045 PF03372 Endonuclease/Exonuclease/phosphatase family F6X00_21055 PF00583 Acetyltransferase (GNAT) family F6X00_21060 PF14760 Rnk N-terminus F6X00_21060 PF01272 Transcription elongation factor, GreA/GreB, C-term F6X00_21090 PF00478 IMP dehydrogenase / GMP reductase domain F6X00_21100 PF01256 Carbohydrate kinase F6X00_21100 PF03853 YjeF-related protein N-terminus F6X00_21120 PF00072 Response regulator receiver domain F6X00_21120 PF00196 Bacterial regulatory proteins, luxR family F6X00_21125 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F6X00_21125 PF07730 Histidine kinase F6X00_21125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_21125 PF00672 HAMP domain F6X00_21130 PF13187 4Fe-4S dicluster domain F6X00_21130 PF12838 4Fe-4S dicluster domain F6X00_21140 PF01568 Molydopterin dinucleotide binding domain F6X00_21140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F6X00_21140 PF00384 Molybdopterin oxidoreductase F6X00_21145 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F6X00_21150 PF03264 NapC/NirT cytochrome c family, N-terminal region F6X00_21160 PF07646 Kelch motif F6X00_21165 PF01344 Kelch motif F6X00_21170 PF01380 SIS domain F6X00_21170 PF01418 Helix-turn-helix domain, rpiR family F6X00_21175 PF00701 Dihydrodipicolinate synthetase family F6X00_21180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F6X00_21185 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F6X00_21190 PF03480 Bacterial extracellular solute-binding protein, family 7 F6X00_21195 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F6X00_21200 PF00480 ROK family F6X00_21205 PF01979 Amidohydrolase family F6X00_21215 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F6X00_21215 PF00561 alpha/beta hydrolase fold F6X00_21225 PF00108 Thiolase, N-terminal domain F6X00_21225 PF02803 Thiolase, C-terminal domain F6X00_21230 PF00106 short chain dehydrogenase F6X00_21235 PF07549 SecD/SecF GG Motif F6X00_21235 PF02355 Protein export membrane protein F6X00_21240 PF02355 Protein export membrane protein F6X00_21240 PF07549 SecD/SecF GG Motif F6X00_21240 PF13721 SecD export protein N-terminal TM region F6X00_21270 PF01037 Lrp/AsnC ligand binding domain F6X00_21285 PF00072 Response regulator receiver domain F6X00_21285 PF09308 LuxQ, periplasmic F6X00_21285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_21285 PF00512 His Kinase A (phospho-acceptor) domain F6X00_21290 PF13407 Periplasmic binding protein domain F6X00_21300 PF01541 GIY-YIG catalytic domain F6X00_21305 PF04337 Protein of unknown function, DUF480 F6X00_21315 PF04363 Protein of unknown function (DUF496) F6X00_21325 PF01554 MatE F6X00_21330 PF01627 Hpt domain F6X00_21330 PF00672 HAMP domain F6X00_21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_21330 PF00512 His Kinase A (phospho-acceptor) domain F6X00_21330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_21330 PF00072 Response regulator receiver domain F6X00_21345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F6X00_21345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F6X00_21355 PF03466 LysR substrate binding domain F6X00_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_21365 PF00462 Glutaredoxin F6X00_21365 PF08534 Redoxin F6X00_21375 PF03466 LysR substrate binding domain F6X00_21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_21380 PF01037 Lrp/AsnC ligand binding domain F6X00_21380 PF13404 AsnC-type helix-turn-helix domain F6X00_21390 PF13520 Amino acid permease F6X00_21395 PF13230 Glutamine amidotransferases class-II F6X00_21400 PF00155 Aminotransferase class I and II F6X00_21400 PF00392 Bacterial regulatory proteins, gntR family F6X00_21410 PF00512 His Kinase A (phospho-acceptor) domain F6X00_21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_21410 PF00672 HAMP domain F6X00_21410 PF16527 Two-component sensor protein CpxA, periplasmic domain F6X00_21415 PF00486 Transcriptional regulatory protein, C terminal F6X00_21415 PF00072 Response regulator receiver domain F6X00_21445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F6X00_21450 PF00873 AcrB/AcrD/AcrF family F6X00_21455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_21455 PF00529 HlyD membrane-fusion protein of T1SS F6X00_21480 PF01769 Divalent cation transporter F6X00_21480 PF03448 MgtE intracellular N domain F6X00_21480 PF00571 CBS domain F6X00_21485 PF12833 Helix-turn-helix domain F6X00_21490 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F6X00_21495 PF07969 Amidohydrolase family F6X00_21500 PF05362 Lon protease (S16) C-terminal proteolytic domain F6X00_21500 PF13654 AAA domain F6X00_21510 PF00005 ABC transporter F6X00_21510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_21515 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F6X00_21515 PF00326 Prolyl oligopeptidase family F6X00_21520 PF03466 LysR substrate binding domain F6X00_21520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_21525 PF02652 L-lactate permease F6X00_21530 PF02754 Cysteine-rich domain F6X00_21535 PF11870 Domain of unknown function (DUF3390) F6X00_21535 PF02589 LUD domain F6X00_21535 PF13183 4Fe-4S dicluster domain F6X00_21540 PF02589 LUD domain F6X00_21560 PF07690 Major Facilitator Superfamily F6X00_21600 PF02378 Phosphotransferase system, EIIC F6X00_21615 PF04170 NlpE N-terminal domain F6X00_21615 PF17185 NlpE C-terminal OB domain F6X00_21620 PF00005 ABC transporter F6X00_21625 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_21630 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_21635 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_21650 PF00990 Diguanylate cyclase, GGDEF domain F6X00_21650 PF00563 EAL domain F6X00_21650 PF08448 PAS fold F6X00_21655 PF13472 GDSL-like Lipase/Acylhydrolase family F6X00_21655 PF17996 Carbohydrate esterase 2 N-terminal F6X00_21670 PF00497 Bacterial extracellular solute-binding proteins, family 3 F6X00_21685 PF17837 4'-phosphopantetheinyl transferase N-terminal domain F6X00_21685 PF01648 4'-phosphopantetheinyl transferase superfamily F6X00_21690 PF00501 AMP-binding enzyme F6X00_21690 PF07993 Male sterility protein F6X00_21690 PF00550 Phosphopantetheine attachment site F6X00_21690 PF13193 AMP-binding enzyme C-terminal domain F6X00_21690 PF00668 Condensation domain F6X00_21695 PF13193 AMP-binding enzyme C-terminal domain F6X00_21695 PF00668 Condensation domain F6X00_21695 PF00550 Phosphopantetheine attachment site F6X00_21695 PF00501 AMP-binding enzyme F6X00_21695 PF00975 Thioesterase domain F6X00_21700 PF00793 DAHP synthetase I family F6X00_21710 PF00425 chorismate binding enzyme F6X00_21715 PF13193 AMP-binding enzyme C-terminal domain F6X00_21715 PF00501 AMP-binding enzyme F6X00_21720 PF04954 Siderophore-interacting protein F6X00_21720 PF08021 Siderophore-interacting FAD-binding domain F6X00_21725 PF00550 Phosphopantetheine attachment site F6X00_21725 PF00857 Isochorismatase family F6X00_21735 PF13193 AMP-binding enzyme C-terminal domain F6X00_21735 PF00501 AMP-binding enzyme F6X00_21745 PF01497 Periplasmic binding protein F6X00_21750 PF07715 TonB-dependent Receptor Plug Domain F6X00_21755 PF00501 AMP-binding enzyme F6X00_21755 PF13193 AMP-binding enzyme C-terminal domain F6X00_21755 PF00668 Condensation domain F6X00_21755 PF00550 Phosphopantetheine attachment site F6X00_21755 PF00975 Thioesterase domain F6X00_21760 PF08443 RimK-like ATP-grasp domain F6X00_21760 PF18030 RimK PreATP-grasp domain F6X00_21765 PF08443 RimK-like ATP-grasp domain F6X00_21765 PF18030 RimK PreATP-grasp domain F6X00_21770 PF00753 Metallo-beta-lactamase superfamily F6X00_21785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_21790 PF00873 AcrB/AcrD/AcrF family F6X00_21805 PF01212 Beta-eliminating lyase F6X00_21810 PF03222 Tryptophan/tyrosine permease family F6X00_21815 PF12848 ABC transporter F6X00_21815 PF00005 ABC transporter F6X00_21815 PF16326 ABC transporter C-terminal domain F6X00_21825 PF00970 Oxidoreductase FAD-binding domain F6X00_21825 PF00111 2Fe-2S iron-sulfur cluster binding domain F6X00_21825 PF00175 Oxidoreductase NAD-binding domain F6X00_21830 PF00356 Bacterial regulatory proteins, lacI family F6X00_21835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_21845 PF03611 PTS system sugar-specific permease component F6X00_21850 PF01327 Polypeptide deformylase F6X00_21855 PF00041 Fibronectin type III domain F6X00_21855 PF12561 ToxR activated gene A lipoprotein domain F6X00_21860 PF00571 CBS domain F6X00_21860 PF01595 Cyclin M transmembrane N-terminal domain F6X00_21860 PF03471 Transporter associated domain F6X00_21870 PF00171 Aldehyde dehydrogenase family F6X00_21875 PF00158 Sigma-54 interaction domain F6X00_21875 PF02954 Bacterial regulatory protein, Fis family F6X00_21875 PF01590 GAF domain F6X00_21880 PF00990 Diguanylate cyclase, GGDEF domain F6X00_21880 PF00563 EAL domain F6X00_21880 PF03707 Bacterial signalling protein N terminal repeat F6X00_21885 PF13407 Periplasmic binding protein domain F6X00_21890 PF14497 Glutathione S-transferase, C-terminal domain F6X00_21890 PF02798 Glutathione S-transferase, N-terminal domain F6X00_21895 PF03466 LysR substrate binding domain F6X00_21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_21900 PF02567 Phenazine biosynthesis-like protein F6X00_21905 PF00072 Response regulator receiver domain F6X00_21905 PF00196 Bacterial regulatory proteins, luxR family F6X00_21910 PF01479 S4 domain F6X00_21910 PF00579 tRNA synthetases class I (W and Y) F6X00_21915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F6X00_21915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F6X00_21920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F6X00_21930 PF13533 Biotin-lipoyl like F6X00_21940 PF00753 Metallo-beta-lactamase superfamily F6X00_21940 PF14864 Alkyl sulfatase C-terminal F6X00_21940 PF14863 Alkyl sulfatase dimerisation F6X00_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_21950 PF03466 LysR substrate binding domain F6X00_21955 PF00884 Sulfatase F6X00_21955 PF08019 Phosphoethanolamine transferase EptA/EptB F6X00_21965 PF01758 Sodium Bile acid symporter family F6X00_21970 PF01022 Bacterial regulatory protein, arsR family F6X00_21990 PF03466 LysR substrate binding domain F6X00_21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22005 PF07687 Peptidase dimerisation domain F6X00_22005 PF01546 Peptidase family M20/M25/M40 F6X00_22010 PF07670 Nucleoside recognition F6X00_22015 PF07670 Nucleoside recognition F6X00_22025 PF00128 Alpha amylase, catalytic domain F6X00_22030 PF14583 Oligogalacturonate lyase F6X00_22035 PF00474 Sodium:solute symporter family F6X00_22040 PF13229 Right handed beta helix region F6X00_22055 PF06917 Periplasmic pectate lyase F6X00_22065 PF01081 KDPG and KHG aldolase F6X00_22070 PF00294 pfkB family carbohydrate kinase F6X00_22075 PF00892 EamA-like transporter family F6X00_22085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22085 PF03466 LysR substrate binding domain F6X00_22095 PF07883 Cupin domain F6X00_22100 PF10688 Bacterial inner membrane protein F6X00_22110 PF09339 IclR helix-turn-helix domain F6X00_22110 PF01614 Bacterial transcriptional regulator F6X00_22150 PF00924 Mechanosensitive ion channel F6X00_22160 PF00873 AcrB/AcrD/AcrF family F6X00_22165 PF13533 Biotin-lipoyl like F6X00_22180 PF00672 HAMP domain F6X00_22180 PF00072 Response regulator receiver domain F6X00_22180 PF01627 Hpt domain F6X00_22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_22180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_22180 PF00512 His Kinase A (phospho-acceptor) domain F6X00_22185 PF00293 NUDIX domain F6X00_22190 PF01161 Phosphatidylethanolamine-binding protein F6X00_22195 PF12833 Helix-turn-helix domain F6X00_22200 PF04244 Deoxyribodipyrimidine photo-lyase-related protein F6X00_22205 PF09278 MerR, DNA binding F6X00_22205 PF00376 MerR family regulatory protein F6X00_22225 PF17151 Periplasmic sensor domain F6X00_22225 PF00990 Diguanylate cyclase, GGDEF domain F6X00_22230 PF00583 Acetyltransferase (GNAT) family F6X00_22240 PF03144 Elongation factor Tu domain 2 F6X00_22240 PF03764 Elongation factor G, domain IV F6X00_22240 PF14492 Elongation Factor G, domain II F6X00_22240 PF00679 Elongation factor G C-terminus F6X00_22240 PF00009 Elongation factor Tu GTP binding domain F6X00_22255 PF02001 Protein of unknown function DUF134 F6X00_22265 PF03150 Di-haem cytochrome c peroxidase F6X00_22265 PF00034 Cytochrome c F6X00_22270 PF06942 GlpM protein F6X00_22280 PF02311 AraC-like ligand binding domain F6X00_22280 PF12833 Helix-turn-helix domain F6X00_22315 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F6X00_22320 PF00892 EamA-like transporter family F6X00_22325 PF00970 Oxidoreductase FAD-binding domain F6X00_22325 PF00175 Oxidoreductase NAD-binding domain F6X00_22335 PF03466 LysR substrate binding domain F6X00_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22345 PF00881 Nitroreductase family F6X00_22350 PF00561 alpha/beta hydrolase fold F6X00_22355 PF00271 Helicase conserved C-terminal domain F6X00_22355 PF00270 DEAD/DEAH box helicase F6X00_22385 PF02868 Thermolysin metallopeptidase, alpha-helical domain F6X00_22385 PF04151 Bacterial pre-peptidase C-terminal domain F6X00_22385 PF03413 Peptidase propeptide and YPEB domain F6X00_22385 PF01447 Thermolysin metallopeptidase, catalytic domain F6X00_22385 PF07504 Fungalysin/Thermolysin Propeptide Motif F6X00_22390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F6X00_22390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F6X00_22400 PF13599 Pentapeptide repeats (9 copies) F6X00_22410 PF12729 Four helix bundle sensory module for signal transduction F6X00_22410 PF00672 HAMP domain F6X00_22410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_22415 PF00672 HAMP domain F6X00_22415 PF00512 His Kinase A (phospho-acceptor) domain F6X00_22415 PF01627 Hpt domain F6X00_22415 PF00072 Response regulator receiver domain F6X00_22415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_22415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F6X00_22420 PF00072 Response regulator receiver domain F6X00_22430 PF01266 FAD dependent oxidoreductase F6X00_22445 PF00158 Sigma-54 interaction domain F6X00_22445 PF00072 Response regulator receiver domain F6X00_22445 PF02954 Bacterial regulatory protein, Fis family F6X00_22450 PF02743 Cache domain F6X00_22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_22450 PF00512 His Kinase A (phospho-acceptor) domain F6X00_22460 PF14864 Alkyl sulfatase C-terminal F6X00_22460 PF14863 Alkyl sulfatase dimerisation F6X00_22460 PF00753 Metallo-beta-lactamase superfamily F6X00_22470 PF00486 Transcriptional regulatory protein, C terminal F6X00_22470 PF00072 Response regulator receiver domain F6X00_22475 PF00512 His Kinase A (phospho-acceptor) domain F6X00_22475 PF00672 HAMP domain F6X00_22475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22480 PF03466 LysR substrate binding domain F6X00_22485 PF00529 HlyD membrane-fusion protein of T1SS F6X00_22485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_22495 PF08267 Cobalamin-independent synthase, N-terminal domain F6X00_22495 PF01717 Cobalamin-independent synthase, Catalytic domain F6X00_22510 PF17158 Membrane-associated sensor, integral membrane domain F6X00_22510 PF00990 Diguanylate cyclase, GGDEF domain F6X00_22525 PF07733 Bacterial DNA polymerase III alpha NTPase domain F6X00_22525 PF11490 DNA polymerase III polC-type N-terminus II F6X00_22525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F6X00_22525 PF02811 PHP domain F6X00_22525 PF14579 Helix-hairpin-helix motif F6X00_22525 PF00929 Exonuclease F6X00_22530 PF12704 MacB-like periplasmic core domain F6X00_22530 PF00005 ABC transporter F6X00_22530 PF02687 FtsX-like permease family F6X00_22535 PF00005 ABC transporter F6X00_22535 PF12704 MacB-like periplasmic core domain F6X00_22535 PF02687 FtsX-like permease family F6X00_22540 PF12704 MacB-like periplasmic core domain F6X00_22540 PF02687 FtsX-like permease family F6X00_22540 PF00005 ABC transporter F6X00_22565 PF00005 ABC transporter F6X00_22570 PF01497 Periplasmic binding protein F6X00_22575 PF01032 FecCD transport family F6X00_22585 PF07715 TonB-dependent Receptor Plug Domain F6X00_22585 PF00593 TonB dependent receptor F6X00_22590 PF01116 Fructose-bisphosphate aldolase class-II F6X00_22595 PF01979 Amidohydrolase family F6X00_22600 PF03610 PTS system fructose IIA component F6X00_22605 PF03613 PTS system mannose/fructose/sorbose family IID component F6X00_22610 PF03609 PTS system sorbose-specific iic component F6X00_22615 PF03830 PTS system sorbose subfamily IIB component F6X00_22620 PF01380 SIS domain F6X00_22625 PF08013 Tagatose 6 phosphate kinase F6X00_22630 PF00455 DeoR C terminal sensor domain F6X00_22630 PF08220 DeoR-like helix-turn-helix domain F6X00_22640 PF08220 DeoR-like helix-turn-helix domain F6X00_22640 PF00455 DeoR C terminal sensor domain F6X00_22645 PF00892 EamA-like transporter family F6X00_22650 PF12833 Helix-turn-helix domain F6X00_22655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F6X00_22655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F6X00_22660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22660 PF03466 LysR substrate binding domain F6X00_22665 PF14863 Alkyl sulfatase dimerisation F6X00_22665 PF00753 Metallo-beta-lactamase superfamily F6X00_22665 PF14864 Alkyl sulfatase C-terminal F6X00_22690 PF01641 SelR domain F6X00_22695 PF01625 Peptide methionine sulfoxide reductase F6X00_22715 PF00672 HAMP domain F6X00_22715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_22730 PF00462 Glutaredoxin F6X00_22735 PF12833 Helix-turn-helix domain F6X00_22735 PF12852 Cupin F6X00_22760 PF03475 3-alpha domain F6X00_22760 PF03473 MOSC domain F6X00_22765 PF00580 UvrD/REP helicase N-terminal domain F6X00_22765 PF13361 UvrD-like helicase C-terminal domain F6X00_22775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22775 PF03466 LysR substrate binding domain F6X00_22795 PF00270 DEAD/DEAH box helicase F6X00_22795 PF00271 Helicase conserved C-terminal domain F6X00_22800 PF03786 D-mannonate dehydratase (UxuA) F6X00_22805 PF00392 Bacterial regulatory proteins, gntR family F6X00_22805 PF07729 FCD domain F6X00_22810 PF03480 Bacterial extracellular solute-binding protein, family 7 F6X00_22815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F6X00_22820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F6X00_22825 PF08125 Mannitol dehydrogenase C-terminal domain F6X00_22825 PF01232 Mannitol dehydrogenase Rossmann domain F6X00_22830 PF02614 Glucuronate isomerase F6X00_22835 PF00294 pfkB family carbohydrate kinase F6X00_22840 PF01081 KDPG and KHG aldolase F6X00_22845 PF10688 Bacterial inner membrane protein F6X00_22850 PF03466 LysR substrate binding domain F6X00_22850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_22860 PF04399 Glutaredoxin 2, C terminal domain F6X00_22860 PF13417 Glutathione S-transferase, N-terminal domain F6X00_22865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F6X00_22875 PF08220 DeoR-like helix-turn-helix domain F6X00_22875 PF00455 DeoR C terminal sensor domain F6X00_22880 PF03611 PTS system sugar-specific permease component F6X00_22885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_22890 PF00596 Class II Aldolase and Adducin N-terminal domain F6X00_22900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F6X00_22905 PF01261 Xylose isomerase-like TIM barrel F6X00_22920 PF00664 ABC transporter transmembrane region F6X00_22920 PF00005 ABC transporter F6X00_22940 PF17386 Lacto-N-biose phosphorylase C-terminal domain F6X00_22940 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain F6X00_22940 PF17385 Lacto-N-biose phosphorylase central domain F6X00_22945 PF07470 Glycosyl Hydrolase Family 88 F6X00_22955 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F6X00_22955 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F6X00_22960 PF16363 GDP-mannose 4,6 dehydratase F6X00_22965 PF00916 Sulfate permease family F6X00_22965 PF01740 STAS domain F6X00_22980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_22980 PF00672 HAMP domain F6X00_22985 PF00005 ABC transporter F6X00_22985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_22990 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_22990 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_22995 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_23000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_23010 PF16347 Domain of unknown function (DUF4976) F6X00_23015 PF04055 Radical SAM superfamily F6X00_23015 PF13186 Iron-sulfur cluster-binding domain F6X00_23020 PF00884 Sulfatase F6X00_23025 PF16385 Domain of unknown function F6X00_23025 PF00884 Sulfatase F6X00_23030 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain F6X00_23030 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain F6X00_23030 PF02278 Polysaccharide lyase family 8, super-sandwich domain F6X00_23040 PF01037 Lrp/AsnC ligand binding domain F6X00_23050 PF00474 Sodium:solute symporter family F6X00_23060 PF01619 Proline dehydrogenase F6X00_23060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F6X00_23060 PF00171 Aldehyde dehydrogenase family F6X00_23060 PF14850 DNA-binding domain of Proline dehydrogenase F6X00_23065 PF12833 Helix-turn-helix domain F6X00_23075 PF01243 Pyridoxamine 5'-phosphate oxidase F6X00_23075 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F6X00_23080 PF00512 His Kinase A (phospho-acceptor) domain F6X00_23080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_23080 PF02743 Cache domain F6X00_23085 PF00072 Response regulator receiver domain F6X00_23085 PF02954 Bacterial regulatory protein, Fis family F6X00_23085 PF00158 Sigma-54 interaction domain F6X00_23090 PF00529 HlyD membrane-fusion protein of T1SS F6X00_23105 PF00664 ABC transporter transmembrane region F6X00_23105 PF00005 ABC transporter F6X00_23105 PF03412 Peptidase C39 family F6X00_23115 PF03606 C4-dicarboxylate anaerobic carrier F6X00_23120 PF01979 Amidohydrolase family F6X00_23135 PF00118 TCP-1/cpn60 chaperonin family F6X00_23140 PF00166 Chaperonin 10 Kd subunit F6X00_23145 PF12464 Maltose acetyltransferase F6X00_23145 PF14602 Hexapeptide repeat of succinyl-transferase F6X00_23160 PF01189 16S rRNA methyltransferase RsmB/F F6X00_23160 PF01029 NusB family F6X00_23165 PF01418 Helix-turn-helix domain, rpiR family F6X00_23165 PF01380 SIS domain F6X00_23175 PF13580 SIS domain F6X00_23180 PF00367 phosphotransferase system, EIIB F6X00_23180 PF02378 Phosphotransferase system, EIIC F6X00_23190 PF00563 EAL domain F6X00_23190 PF01590 GAF domain F6X00_23190 PF00990 Diguanylate cyclase, GGDEF domain F6X00_23190 PF00989 PAS fold F6X00_23195 PF00300 Histidine phosphatase superfamily (branch 1) F6X00_23200 PF01752 Collagenase F6X00_23200 PF08453 Peptidase family M9 N-terminal F6X00_23200 PF04151 Bacterial pre-peptidase C-terminal domain F6X00_23210 PF01039 Carboxyl transferase domain F6X00_23210 PF17848 Acetyl-coA carboxylase zinc finger domain F6X00_23245 PF00990 Diguanylate cyclase, GGDEF domain F6X00_23245 PF00072 Response regulator receiver domain F6X00_23255 PF00672 HAMP domain F6X00_23255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_23255 PF02203 Tar ligand binding domain homologue F6X00_23260 PF00072 Response regulator receiver domain F6X00_23260 PF01339 CheB methylesterase F6X00_23265 PF03975 CheD chemotactic sensory transduction F6X00_23270 PF01739 CheR methyltransferase, SAM binding domain F6X00_23270 PF03705 CheR methyltransferase, all-alpha domain F6X00_23275 PF02203 Tar ligand binding domain homologue F6X00_23275 PF00672 HAMP domain F6X00_23275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_23280 PF01584 CheW-like domain F6X00_23285 PF01584 CheW-like domain F6X00_23290 PF02895 Signal transducing histidine kinase, homodimeric domain F6X00_23290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_23290 PF09078 CheY binding F6X00_23290 PF01627 Hpt domain F6X00_23290 PF01584 CheW-like domain F6X00_23295 PF00072 Response regulator receiver domain F6X00_23305 PF05127 Helicase F6X00_23305 PF13718 GNAT acetyltransferase 2 F6X00_23310 PF02195 ParB-like nuclease domain F6X00_23310 PF08775 ParB family F6X00_23315 PF18607 ParA helix turn helix domain F6X00_23315 PF13614 AAA domain F6X00_23330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_23330 PF00005 ABC transporter F6X00_23335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_23335 PF00005 ABC transporter F6X00_23345 PF08719 Domain of unknown function (DUF1768) F6X00_23345 PF00925 GTP cyclohydrolase II F6X00_23355 PF00072 Response regulator receiver domain F6X00_23355 PF01627 Hpt domain F6X00_23355 PF17149 Periplasmic sensor domain found in signal transduction proteins F6X00_23355 PF00672 HAMP domain F6X00_23355 PF00512 His Kinase A (phospho-acceptor) domain F6X00_23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_23365 PF01709 Transcriptional regulator F6X00_23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_23375 PF03466 LysR substrate binding domain F6X00_23385 PF00005 ABC transporter F6X00_23390 PF02687 FtsX-like permease family F6X00_23390 PF12704 MacB-like periplasmic core domain F6X00_23405 PF06580 Histidine kinase F6X00_23405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_23405 PF07694 5TMR of 5TMR-LYT F6X00_23410 PF04397 LytTr DNA-binding domain F6X00_23410 PF00072 Response regulator receiver domain F6X00_23415 PF00672 HAMP domain F6X00_23415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_23415 PF17200 Single Cache domain 2 F6X00_23425 PF03616 Sodium/glutamate symporter F6X00_23430 PF03616 Sodium/glutamate symporter F6X00_23440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F6X00_23455 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F6X00_23455 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F6X00_23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_23465 PF03466 LysR substrate binding domain F6X00_23475 PF06029 AlkA N-terminal domain F6X00_23475 PF00730 HhH-GPD superfamily base excision DNA repair protein F6X00_23480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F6X00_23480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F6X00_23485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F6X00_23500 PF03600 Citrate transporter F6X00_23510 PF00440 Bacterial regulatory proteins, tetR family F6X00_23510 PF08361 MAATS-type transcriptional repressor, C-terminal region F6X00_23520 PF00704 Glycosyl hydrolases family 18 F6X00_23520 PF08329 Chitinase A, N-terminal domain F6X00_23530 PF06865 Pyrimidine/purine nucleoside phosphorylase F6X00_23535 PF02678 Pirin F6X00_23535 PF05726 Pirin C-terminal cupin domain F6X00_23545 PF00563 EAL domain F6X00_23545 PF00990 Diguanylate cyclase, GGDEF domain F6X00_23550 PF17158 Membrane-associated sensor, integral membrane domain F6X00_23550 PF00990 Diguanylate cyclase, GGDEF domain F6X00_23555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F6X00_23555 PF00128 Alpha amylase, catalytic domain F6X00_23560 PF02264 LamB porin F6X00_23565 PF07148 Maltose operon periplasmic protein precursor (MalM) F6X00_23575 PF01547 Bacterial extracellular solute-binding protein F6X00_23580 PF00128 Alpha amylase, catalytic domain F6X00_23580 PF16657 Maltogenic Amylase, C-terminal domain F6X00_23580 PF02903 Alpha amylase, N-terminal ig-like domain F6X00_23590 PF11852 Domain of unknown function (DUF3372) F6X00_23590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F6X00_23590 PF17967 Pullulanase N2 domain F6X00_23590 PF03714 Bacterial pullanase-associated domain F6X00_23590 PF18494 Pullulanase Ins domain F6X00_23605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F6X00_23605 PF01276 Orn/Lys/Arg decarboxylase, major domain F6X00_23605 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F6X00_23610 PF13520 Amino acid permease F6X00_23615 PF08543 Phosphomethylpyrimidine kinase F6X00_23620 PF00375 Sodium:dicarboxylate symporter family F6X00_23625 PF03193 RsgA GTPase F6X00_23630 PF04314 Copper chaperone PCu(A)C F6X00_23635 PF02630 SCO1/SenC F6X00_23650 PF00196 Bacterial regulatory proteins, luxR family F6X00_23650 PF17874 MalT-like TPR region F6X00_23655 PF00343 Carbohydrate phosphorylase F6X00_23660 PF02446 4-alpha-glucanotransferase F6X00_23665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F6X00_23665 PF02806 Alpha amylase, C-terminal all-beta domain F6X00_23665 PF00128 Alpha amylase, catalytic domain F6X00_23670 PF00672 HAMP domain F6X00_23670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_23670 PF16591 Helical bimodular sensor domain F6X00_23675 PF04055 Radical SAM superfamily F6X00_23675 PF18693 TRAM domain F6X00_23675 PF00919 Uncharacterized protein family UPF0004 F6X00_23680 PF01810 LysE type translocator F6X00_23685 PF01037 Lrp/AsnC ligand binding domain F6X00_23695 PF01470 Pyroglutamyl peptidase F6X00_23720 PF02743 Cache domain F6X00_23720 PF00672 HAMP domain F6X00_23720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F6X00_23735 PF00171 Aldehyde dehydrogenase family F6X00_23740 PF02798 Glutathione S-transferase, N-terminal domain F6X00_23745 PF01966 HD domain F6X00_23750 PF02690 Na+/Pi-cotransporter F6X00_23755 PF05193 Peptidase M16 inactive domain F6X00_23755 PF00675 Insulinase (Peptidase family M16) F6X00_23765 PF03466 LysR substrate binding domain F6X00_23765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_23770 PF03466 LysR substrate binding domain F6X00_23770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_23780 PF01699 Sodium/calcium exchanger protein F6X00_23785 PF09335 SNARE associated Golgi protein F6X00_23795 PF00512 His Kinase A (phospho-acceptor) domain F6X00_23795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_23795 PF08521 Two-component sensor kinase N-terminal F6X00_23800 PF00072 Response regulator receiver domain F6X00_23800 PF00486 Transcriptional regulatory protein, C terminal F6X00_23815 PF00501 AMP-binding enzyme F6X00_23825 PF00990 Diguanylate cyclase, GGDEF domain F6X00_23835 PF02264 LamB porin F6X00_23845 PF00356 Bacterial regulatory proteins, lacI family F6X00_23855 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_23860 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_23865 PF00232 Glycosyl hydrolase family 1 F6X00_23870 PF08402 TOBE domain F6X00_23870 PF00005 ABC transporter F6X00_23875 PF00356 Bacterial regulatory proteins, lacI family F6X00_23885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F6X00_23890 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_23895 PF12911 N-terminal TM domain of oligopeptide transport permease C F6X00_23895 PF00528 Binding-protein-dependent transport system inner membrane component F6X00_23900 PF00005 ABC transporter F6X00_23900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_23905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F6X00_23905 PF00005 ABC transporter F6X00_23915 PF00356 Bacterial regulatory proteins, lacI family F6X00_23925 PF00722 Glycosyl hydrolases family 16 F6X00_23930 PF02264 LamB porin F6X00_23935 PF12833 Helix-turn-helix domain F6X00_23945 PF01915 Glycosyl hydrolase family 3 C-terminal domain F6X00_23945 PF00933 Glycosyl hydrolase family 3 N terminal domain F6X00_23945 PF14310 Fibronectin type III-like domain F6X00_23950 PF01554 MatE F6X00_23960 PF00529 HlyD membrane-fusion protein of T1SS F6X00_23960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F6X00_23990 PF00849 RNA pseudouridylate synthase F6X00_23995 PF00563 EAL domain F6X00_23995 PF03707 Bacterial signalling protein N terminal repeat F6X00_23995 PF00990 Diguanylate cyclase, GGDEF domain F6X00_24000 PF00873 AcrB/AcrD/AcrF family F6X00_24015 PF00356 Bacterial regulatory proteins, lacI family F6X00_24020 PF02653 Branched-chain amino acid transport system / permease component F6X00_24025 PF00005 ABC transporter F6X00_24030 PF13407 Periplasmic binding protein domain F6X00_24035 PF02929 Beta galactosidase small chain F6X00_24035 PF16353 Domain of unknown function(DUF4981) F6X00_24035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F6X00_24035 PF00703 Glycosyl hydrolases family 2 F6X00_24035 PF02837 Glycosyl hydrolases family 2, sugar binding domain F6X00_24045 PF16875 Glycosyl hydrolase family 36 N-terminal domain F6X00_24045 PF16874 Glycosyl hydrolase family 36 C-terminal domain F6X00_24055 PF08032 RNA 2'-O ribose methyltransferase substrate binding F6X00_24055 PF00588 SpoU rRNA Methylase family F6X00_24060 PF00037 4Fe-4S binding domain F6X00_24060 PF11953 Domain of unknown function (DUF3470) F6X00_24070 PF00593 TonB dependent receptor F6X00_24070 PF07715 TonB-dependent Receptor Plug Domain F6X00_24075 PF12833 Helix-turn-helix domain F6X00_24105 PF01238 Phosphomannose isomerase type I F6X00_24110 PF02378 Phosphotransferase system, EIIC F6X00_24110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F6X00_24110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F6X00_24115 PF12833 Helix-turn-helix domain F6X00_24125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F6X00_24175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F6X00_24175 PF12838 4Fe-4S dicluster domain F6X00_24175 PF00384 Molybdopterin oxidoreductase F6X00_24175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F6X00_24175 PF01568 Molydopterin dinucleotide binding domain F6X00_24185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F6X00_24185 PF00356 Bacterial regulatory proteins, lacI family F6X00_24190 PF02378 Phosphotransferase system, EIIC F6X00_24190 PF00367 phosphotransferase system, EIIB F6X00_24195 PF00155 Aminotransferase class I and II F6X00_24200 PF01238 Phosphomannose isomerase type I F6X00_24205 PF01048 Phosphorylase superfamily F6X00_24210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24210 PF03466 LysR substrate binding domain F6X00_24215 PF04151 Bacterial pre-peptidase C-terminal domain F6X00_24215 PF01752 Collagenase F6X00_24215 PF08453 Peptidase family M9 N-terminal F6X00_24240 PF04973 Nicotinamide mononucleotide transporter F6X00_24245 PF01048 Phosphorylase superfamily F6X00_24265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24265 PF03466 LysR substrate binding domain F6X00_24270 PF01638 HxlR-like helix-turn-helix F6X00_24290 PF00764 Arginosuccinate synthase F6X00_24295 PF03466 LysR substrate binding domain F6X00_24295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24300 PF00375 Sodium:dicarboxylate symporter family F6X00_24330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24330 PF03466 LysR substrate binding domain F6X00_24340 PF00881 Nitroreductase family F6X00_24345 PF05958 tRNA (Uracil-5-)-methyltransferase F6X00_24350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F6X00_24380 PF00392 Bacterial regulatory proteins, gntR family F6X00_24380 PF00155 Aminotransferase class I and II F6X00_24390 PF00990 Diguanylate cyclase, GGDEF domain F6X00_24390 PF08448 PAS fold F6X00_24405 PF04231 Endonuclease I F6X00_24410 PF16657 Maltogenic Amylase, C-terminal domain F6X00_24410 PF02903 Alpha amylase, N-terminal ig-like domain F6X00_24410 PF00128 Alpha amylase, catalytic domain F6X00_24420 PF00884 Sulfatase F6X00_24425 PF00884 Sulfatase F6X00_24425 PF08019 Phosphoethanolamine transferase EptA/EptB F6X00_24430 PF01219 Prokaryotic diacylglycerol kinase F6X00_24435 PF00672 HAMP domain F6X00_24435 PF00512 His Kinase A (phospho-acceptor) domain F6X00_24435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_24440 PF00486 Transcriptional regulatory protein, C terminal F6X00_24440 PF00072 Response regulator receiver domain F6X00_24455 PF03466 LysR substrate binding domain F6X00_24455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24460 PF00106 short chain dehydrogenase F6X00_24465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24465 PF03466 LysR substrate binding domain F6X00_24485 PF01323 DSBA-like thioredoxin domain F6X00_24490 PF00282 Pyridoxal-dependent decarboxylase conserved domain F6X00_24495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F6X00_24520 PF01569 PAP2 superfamily F6X00_24525 PF08543 Phosphomethylpyrimidine kinase F6X00_24530 PF04013 Putative SAM-dependent RNA methyltransferase F6X00_24585 PF10928 Protein of unknown function (DUF2810) F6X00_24595 PF07690 Major Facilitator Superfamily F6X00_24610 PF00056 lactate/malate dehydrogenase, NAD binding domain F6X00_24610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F6X00_24615 PF13416 Bacterial extracellular solute-binding protein F6X00_24620 PF07715 TonB-dependent Receptor Plug Domain F6X00_24620 PF00593 TonB dependent receptor F6X00_24630 PF00563 EAL domain F6X00_24630 PF03707 Bacterial signalling protein N terminal repeat F6X00_24630 PF00990 Diguanylate cyclase, GGDEF domain F6X00_24640 PF01906 Putative heavy-metal-binding F6X00_24645 PF03466 LysR substrate binding domain F6X00_24645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24655 PF01966 HD domain F6X00_24675 PF00080 Copper/zinc superoxide dismutase (SODC) F6X00_24685 PF06628 Catalase-related immune-responsive F6X00_24685 PF00199 Catalase F6X00_24705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F6X00_24710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_24710 PF03466 LysR substrate binding domain F6X00_24715 PF07690 Major Facilitator Superfamily F6X00_24725 PF00082 Subtilase family F6X00_24725 PF05922 Peptidase inhibitor I9 F6X00_24730 PF00657 GDSL-like Lipase/Acylhydrolase F6X00_24735 PF00155 Aminotransferase class I and II F6X00_24740 PF00107 Zinc-binding dehydrogenase F6X00_24740 PF08240 Alcohol dehydrogenase GroES-like domain F6X00_24775 PF09669 Phage regulatory protein Rha (Phage_pRha) F6X00_24775 PF10549 ORF11CD3 domain F6X00_24780 PF12167 Arm DNA-binding domain F6X00_24780 PF00589 Phage integrase family F6X00_24815 PF01381 Helix-turn-helix F6X00_24815 PF00717 Peptidase S24-like F6X00_24840 PF03354 Phage Terminase F6X00_24865 PF06147 Protein of unknown function (DUF968) F6X00_24910 PF00959 Phage lysozyme F6X00_24940 PF01972 Serine dehydrogenase proteinase F6X00_24940 PF01957 NfeD-like C-terminal, partner-binding F6X00_24950 PF03864 Phage major capsid protein E F6X00_25025 PF08240 Alcohol dehydrogenase GroES-like domain F6X00_25025 PF00107 Zinc-binding dehydrogenase F6X00_25100 PF08212 Lipocalin-like domain F6X00_25125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F6X00_25125 PF03466 LysR substrate binding domain F6X00_25135 PF01593 Flavin containing amine oxidoreductase F6X00_25145 PF00072 Response regulator receiver domain F6X00_25145 PF00196 Bacterial regulatory proteins, luxR family F6X00_25150 PF03707 Bacterial signalling protein N terminal repeat F6X00_25150 PF00990 Diguanylate cyclase, GGDEF domain F6X00_25150 PF00563 EAL domain F6X00_25155 PF00072 Response regulator receiver domain F6X00_25155 PF00196 Bacterial regulatory proteins, luxR family F6X00_25160 PF03707 Bacterial signalling protein N terminal repeat F6X00_25160 PF00990 Diguanylate cyclase, GGDEF domain F6X00_25160 PF00563 EAL domain F6X00_25165 PF00072 Response regulator receiver domain F6X00_25165 PF09456 RcsC Alpha-Beta-Loop (ABL) F6X00_25165 PF00512 His Kinase A (phospho-acceptor) domain F6X00_25165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F6X00_25170 PF04076 Bacterial OB fold (BOF) protein F6X00_25180 PF03412 Peptidase C39 family F6X00_25180 PF00005 ABC transporter F6X00_25180 PF00664 ABC transporter transmembrane region F6X00_25185 PF00529 HlyD membrane-fusion protein of T1SS F6X00_25205 PF07916 TraG-like protein, N-terminal region F6X00_25220 PF13728 F plasmid transfer operon protein F6X00_25225 PF06986 Type-1V conjugative transfer system mating pair stabilisation F6X00_25240 PF06834 TraU protein F6X00_25250 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer F6X00_25310 PF13614 AAA domain F6X00_25325 PF02796 Helix-turn-helix domain of resolvase F6X00_25325 PF00239 Resolvase, N terminal domain F6X00_25330 PF02796 Helix-turn-helix domain of resolvase F6X00_25330 PF00239 Resolvase, N terminal domain F6X00_25345 PF00576 HIUase/Transthyretin family F6X00_25375 PF13614 AAA domain F6X00_25375 PF00376 MerR family regulatory protein F6X00_25415 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system F6X00_25510 PF05973 Phage derived protein Gp49-like (DUF891) F6X00_25515 PF01381 Helix-turn-helix F6X00_25540 PF07057 DNA helicase TraI F6X00_25540 PF18272 single-stranded DNA binding TraI N-terminal subdomain F6X00_25540 PF08751 TrwC relaxase F6X00_25540 PF18340 DNA relaxase TraI 2B/2B-like domain F6X00_25545 PF12615 F sex factor protein N terminal F6X00_25545 PF10412 Type IV secretion-system coupling protein DNA-binding domain F6X00_25560 PF01848 Hok/gef family