locus-tag class description A21D_00006 PF00574 Clp protease A21D_00024 PF01367 5'-3' exonuclease, C-terminal SAM fold A21D_00024 PF00476 DNA polymerase family A A21D_00024 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A21D_00039 PF02498 BRO family, N-terminal domain A21D_00039 PF10548 P22AR C-terminal domain A21D_00044 PF14659 Phage integrase, N-terminal SAM-like domain A21D_00044 PF00589 Phage integrase family A21D_00045 PF01458 Uncharacterized protein family (UPF0051) A21D_00046 PF01592 NifU-like N terminal domain A21D_00047 PF00266 Aminotransferase class-V A21D_00048 PF01458 Uncharacterized protein family (UPF0051) A21D_00049 PF00005 ABC transporter A21D_00051 PF03180 NLPA lipoprotein A21D_00052 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00053 PF00005 ABC transporter A21D_00053 PF09383 NIL domain A21D_00054 PF00085 Thioredoxin A21D_00055 PF01751 Toprim domain A21D_00056 PF01597 Glycine cleavage H-protein A21D_00057 PF03960 ArsC family A21D_00058 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_00058 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_00058 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_00059 PF02803 Thiolase, C-terminal domain A21D_00059 PF00108 Thiolase, N-terminal domain A21D_00060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A21D_00060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A21D_00060 PF00378 Enoyl-CoA hydratase/isomerase A21D_00061 PF01297 Zinc-uptake complex component A periplasmic A21D_00061 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment A21D_00062 PF00005 ABC transporter A21D_00063 PF00950 ABC 3 transport family A21D_00064 PF01475 Ferric uptake regulator family A21D_00065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A21D_00066 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A21D_00067 PF18846 Bacterial archaeo-eukaryotic release factor family 5 A21D_00068 PF00893 Small Multidrug Resistance protein A21D_00069 PF00893 Small Multidrug Resistance protein A21D_00070 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_00071 PF00877 NlpC/P60 family A21D_00072 PF00463 Isocitrate lyase family A21D_00073 PF06081 Aromatic acid exporter family member 1 A21D_00074 PF00196 Bacterial regulatory proteins, luxR family A21D_00074 PF00072 Response regulator receiver domain A21D_00075 PF07730 Histidine kinase A21D_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00079 PF09335 SNARE associated Golgi protein A21D_00080 PF00296 Luciferase-like monooxygenase A21D_00082 PF03006 Haemolysin-III related A21D_00083 PF00571 CBS domain A21D_00085 PF05504 Spore germination B3/ GerAC like, C-terminal A21D_00087 PF00486 Transcriptional regulatory protein, C terminal A21D_00087 PF00072 Response regulator receiver domain A21D_00088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00089 PF00005 ABC transporter A21D_00090 PF02687 FtsX-like permease family A21D_00093 PF01668 SmpB protein A21D_00094 PF00575 S1 RNA binding domain A21D_00094 PF08206 Ribonuclease B OB domain A21D_00094 PF17876 Cold shock domain A21D_00094 PF00773 RNB domain A21D_00095 PF12146 Serine aminopeptidase, S33 A21D_00096 PF03840 Preprotein translocase SecG subunit A21D_00098 PF02896 PEP-utilising enzyme, TIM barrel domain A21D_00098 PF05524 PEP-utilising enzyme, N-terminal A21D_00098 PF00391 PEP-utilising enzyme, mobile domain A21D_00099 PF01026 TatD related DNase A21D_00100 PF00005 ABC transporter A21D_00101 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00102 PF01910 Thiamine-binding protein A21D_00104 PF00113 Enolase, C-terminal TIM barrel domain A21D_00104 PF03952 Enolase, N-terminal domain A21D_00105 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A21D_00105 PF01676 Metalloenzyme superfamily A21D_00106 PF00121 Triosephosphate isomerase A21D_00107 PF00162 Phosphoglycerate kinase A21D_00108 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A21D_00108 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A21D_00109 PF04198 Putative sugar-binding domain A21D_00112 PF04552 Sigma-54, DNA binding domain A21D_00112 PF04963 Sigma-54 factor, core binding domain A21D_00112 PF00309 Sigma-54 factor, Activator interacting domain (AID) A21D_00113 PF13456 Reverse transcriptase-like A21D_00114 PF01487 Type I 3-dehydroquinase A21D_00115 PF01202 Shikimate kinase A21D_00116 PF08863 YolD-like protein A21D_00119 PF02626 Carboxyltransferase domain, subdomain A and B A21D_00120 PF02682 Carboxyltransferase domain, subdomain C and D A21D_00121 PF03746 LamB/YcsF family A21D_00122 PF01566 Natural resistance-associated macrophage protein A21D_00127 PF00665 Integrase core domain A21D_00127 PF13936 Helix-turn-helix domain A21D_00129 PF00574 Clp protease A21D_00130 PF00381 PTS HPr component phosphorylation site A21D_00131 PF10298 WhiA N-terminal LAGLIDADG-like domain A21D_00131 PF14527 WhiA LAGLIDADG-like domain A21D_00131 PF02650 WhiA C-terminal HTH domain A21D_00132 PF01933 Uncharacterised protein family UPF0052 A21D_00133 PF03668 P-loop ATPase protein family A21D_00134 PF00293 NUDIX domain A21D_00135 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_00137 PF01266 FAD dependent oxidoreductase A21D_00137 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A21D_00138 PF04309 Glycerol-3-phosphate responsive antiterminator A21D_00139 PF14602 Hexapeptide repeat of succinyl-transferase A21D_00140 PF13419 Haloacid dehalogenase-like hydrolase A21D_00141 PF07670 Nucleoside recognition A21D_00142 PF01790 Prolipoprotein diacylglyceryl transferase A21D_00143 PF02603 HPr Serine kinase N terminus A21D_00143 PF07475 HPr Serine kinase C-terminal domain A21D_00144 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV A21D_00145 PF04024 PspC domain A21D_00146 PF02585 GlcNAc-PI de-N-acetylase A21D_00147 PF08830 Protein of unknown function (DUF1806) A21D_00148 PF00005 ABC transporter A21D_00148 PF17755 UvrA DNA-binding domain A21D_00148 PF17760 UvrA interaction domain A21D_00149 PF02151 UvrB/uvrC motif A21D_00149 PF04851 Type III restriction enzyme, res subunit A21D_00149 PF12344 Ultra-violet resistance protein B A21D_00149 PF17757 UvrB interaction domain A21D_00149 PF00271 Helicase conserved C-terminal domain A21D_00150 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase A21D_00153 PF17820 PDZ domain A21D_00153 PF03572 Peptidase family S41 A21D_00153 PF01471 Putative peptidoglycan binding domain A21D_00154 PF01551 Peptidase family M23 A21D_00154 PF04225 Opacity-associated protein A LysM-like domain A21D_00155 PF02687 FtsX-like permease family A21D_00155 PF18075 FtsX extracellular domain A21D_00156 PF00005 ABC transporter A21D_00157 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A21D_00158 PF00472 RF-1 domain A21D_00158 PF03462 PCRF domain A21D_00159 PF07517 SecA DEAD-like domain A21D_00159 PF02810 SEC-C motif A21D_00159 PF07516 SecA Wing and Scaffold domain A21D_00159 PF01043 SecA preprotein cross-linking domain A21D_00160 PF12833 Helix-turn-helix domain A21D_00161 PF07670 Nucleoside recognition A21D_00161 PF07662 Na+ dependent nucleoside transporter C-terminus A21D_00161 PF01773 Na+ dependent nucleoside transporter N-terminus A21D_00162 PF01156 Inosine-uridine preferring nucleoside hydrolase A21D_00164 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus A21D_00164 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A21D_00166 PF02561 Flagellar protein FliS A21D_00167 PF02465 Flagellar hook-associated protein 2 N-terminus A21D_00167 PF07195 Flagellar hook-associated protein 2 C-terminus A21D_00168 PF03646 FlaG protein A21D_00169 PF02599 Global regulator protein family A21D_00170 PF02623 FliW protein A21D_00172 PF00700 Bacterial flagellin C-terminal helical region A21D_00172 PF00669 Bacterial flagellin N-terminal helical region A21D_00173 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A21D_00173 PF00460 Flagella basal body rod protein A21D_00178 PF04851 Type III restriction enzyme, res subunit A21D_00178 PF00271 Helicase conserved C-terminal domain A21D_00181 PF00196 Bacterial regulatory proteins, luxR family A21D_00181 PF00072 Response regulator receiver domain A21D_00184 PF02645 Uncharacterised protein, DegV family COG1307 A21D_00185 PF00196 Bacterial regulatory proteins, luxR family A21D_00185 PF00072 Response regulator receiver domain A21D_00186 PF05384 Sensor protein DegS A21D_00186 PF07730 Histidine kinase A21D_00186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00187 PF09186 Domain of unknown function (DUF1949) A21D_00187 PF01205 Uncharacterized protein family UPF0029 A21D_00188 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A21D_00189 PF01979 Amidohydrolase family A21D_00191 PF01381 Helix-turn-helix A21D_00191 PF08671 Anti-repressor SinI A21D_00192 PF03816 Cell envelope-related transcriptional attenuator domain A21D_00193 PF00905 Penicillin binding protein transpeptidase domain A21D_00193 PF03717 Penicillin-binding Protein dimerisation domain A21D_00193 PF05223 NTF2-like N-terminal transpeptidase domain A21D_00195 PF00171 Aldehyde dehydrogenase family A21D_00198 PF07690 Major Facilitator Superfamily A21D_00199 PF01470 Pyroglutamyl peptidase A21D_00200 PF00939 Sodium:sulfate symporter transmembrane region A21D_00201 PF03702 Anhydro-N-acetylmuramic acid kinase A21D_00203 PF07690 Major Facilitator Superfamily A21D_00204 PF07690 Major Facilitator Superfamily A21D_00206 PF00884 Sulfatase A21D_00207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00207 PF00672 HAMP domain A21D_00207 PF12729 Four helix bundle sensory module for signal transduction A21D_00208 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00209 PF00171 Aldehyde dehydrogenase family A21D_00214 PF01244 Membrane dipeptidase (Peptidase family M19) A21D_00215 PF01869 BadF/BadG/BcrA/BcrD ATPase family A21D_00218 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_00220 PF02378 Phosphotransferase system, EIIC A21D_00222 PF02056 Family 4 glycosyl hydrolase A21D_00222 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_00223 PF00356 Bacterial regulatory proteins, lacI family A21D_00224 PF01055 Glycosyl hydrolases family 31 A21D_00224 PF13802 Galactose mutarotase-like A21D_00224 PF17137 Domain of unknown function (DUF5110) A21D_00224 PF16338 Domain of unknown function (DUF4968) A21D_00225 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00226 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00227 PF13416 Bacterial extracellular solute-binding protein A21D_00228 PF00128 Alpha amylase, catalytic domain A21D_00228 PF02903 Alpha amylase, N-terminal ig-like domain A21D_00228 PF16657 Maltogenic Amylase, C-terminal domain A21D_00232 PF02538 Hydantoinase B/oxoprolinase A21D_00233 PF01968 Hydantoinase/oxoprolinase A21D_00233 PF05378 Hydantoinase/oxoprolinase N-terminal region A21D_00236 PF01842 ACT domain A21D_00236 PF00551 Formyl transferase A21D_00237 PF07722 Peptidase C26 A21D_00238 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00239 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00240 PF00005 ABC transporter A21D_00245 PF00037 4Fe-4S binding domain A21D_00245 PF12800 4Fe-4S binding domain A21D_00247 PF01546 Peptidase family M20/M25/M40 A21D_00247 PF07687 Peptidase dimerisation domain A21D_00248 PF01751 Toprim domain A21D_00248 PF01131 DNA topoisomerase A21D_00249 PF02659 Putative manganese efflux pump A21D_00251 PF17783 CvfB-like winged helix domain A21D_00251 PF13509 S1 domain A21D_00254 PF02417 Chromate transporter A21D_00255 PF02417 Chromate transporter A21D_00257 PF13404 AsnC-type helix-turn-helix domain A21D_00257 PF01037 Lrp/AsnC ligand binding domain A21D_00258 PF07694 5TMR of 5TMR-LYT A21D_00258 PF06580 Histidine kinase A21D_00258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00258 PF13492 GAF domain A21D_00259 PF00072 Response regulator receiver domain A21D_00259 PF04397 LytTr DNA-binding domain A21D_00260 PF02554 Carbon starvation protein CstA A21D_00261 PF03610 PTS system fructose IIA component A21D_00262 PF02734 DAK2 domain A21D_00263 PF02733 Dak1 domain A21D_00264 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A21D_00264 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A21D_00265 PF00230 Major intrinsic protein A21D_00266 PF01804 Penicillin amidase A21D_00268 PF13537 Glutamine amidotransferase domain A21D_00268 PF00733 Asparagine synthase A21D_00269 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_00270 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00271 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00272 PF00005 ABC transporter A21D_00272 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00273 PF00005 ABC transporter A21D_00273 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00275 PF01381 Helix-turn-helix A21D_00279 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A21D_00279 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A21D_00280 PF00480 ROK family A21D_00282 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain A21D_00282 PF17386 Lacto-N-biose phosphorylase C-terminal domain A21D_00282 PF17385 Lacto-N-biose phosphorylase central domain A21D_00283 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00284 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00286 PF02311 AraC-like ligand binding domain A21D_00286 PF12833 Helix-turn-helix domain A21D_00287 PF17451 Glycosyl hydrolase 101 beta sandwich domain A21D_00287 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal A21D_00287 PF17974 Galactose-binding domain-like A21D_00287 PF12905 Endo-alpha-N-acetylgalactosaminidase A21D_00287 PF18080 Galactose mutarotase-like fold domain A21D_00287 PF00754 F5/8 type C domain A21D_00287 PF04650 YSIRK type signal peptide A21D_00288 PF16363 GDP-mannose 4,6 dehydratase A21D_00291 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_00291 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A21D_00292 PF00291 Pyridoxal-phosphate dependent enzyme A21D_00292 PF13291 ACT domain A21D_00293 PF00694 Aconitase C-terminal domain A21D_00294 PF00330 Aconitase family (aconitate hydratase) A21D_00295 PF00180 Isocitrate/isopropylmalate dehydrogenase A21D_00296 PF08502 LeuA allosteric (dimerisation) domain A21D_00296 PF00682 HMGL-like A21D_00297 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A21D_00297 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A21D_00298 PF01842 ACT domain A21D_00298 PF10369 Small subunit of acetolactate synthase A21D_00299 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_00299 PF00205 Thiamine pyrophosphate enzyme, central domain A21D_00299 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_00300 PF00920 Dehydratase family A21D_00301 PF01588 Putative tRNA binding domain A21D_00302 PF00171 Aldehyde dehydrogenase family A21D_00303 PF01472 PUA domain A21D_00303 PF00696 Amino acid kinase family A21D_00304 PF07690 Major Facilitator Superfamily A21D_00307 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A21D_00309 PF02627 Carboxymuconolactone decarboxylase family A21D_00314 PF00583 Acetyltransferase (GNAT) family A21D_00316 PF13673 Acetyltransferase (GNAT) domain A21D_00316 PF00583 Acetyltransferase (GNAT) family A21D_00320 PF06908 YspA SLOG family A21D_00324 PF01741 Large-conductance mechanosensitive channel, MscL A21D_00326 PF03819 MazG nucleotide pyrophosphohydrolase domain A21D_00327 PF08179 Small acid-soluble spore protein P family A21D_00328 PF13302 Acetyltransferase (GNAT) domain A21D_00329 PF02833 DHHA2 domain A21D_00329 PF01368 DHH family A21D_00330 PF01266 FAD dependent oxidoreductase A21D_00332 PF01740 STAS domain A21D_00332 PF00916 Sulfate permease family A21D_00334 PF04229 GrpB protein A21D_00334 PF13673 Acetyltransferase (GNAT) domain A21D_00336 PF01654 Cytochrome bd terminal oxidase subunit I A21D_00337 PF02322 Cytochrome bd terminal oxidase subunit II A21D_00338 PF00005 ABC transporter A21D_00338 PF00664 ABC transporter transmembrane region A21D_00339 PF00664 ABC transporter transmembrane region A21D_00339 PF00005 ABC transporter A21D_00340 PF03932 CutC family A21D_00341 PF00883 Cytosol aminopeptidase family, catalytic domain A21D_00341 PF02789 Cytosol aminopeptidase family, N-terminal domain A21D_00342 PF00480 ROK family A21D_00343 PF08244 Glycosyl hydrolases family 32 C terminal A21D_00343 PF00251 Glycosyl hydrolases family 32 N-terminal domain A21D_00344 PF00367 phosphotransferase system, EIIB A21D_00344 PF02378 Phosphotransferase system, EIIC A21D_00346 PF00356 Bacterial regulatory proteins, lacI family A21D_00349 PF02566 OsmC-like protein A21D_00352 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_00352 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A21D_00358 PF06177 QueT transporter A21D_00360 PF00005 ABC transporter A21D_00365 PF12799 Leucine Rich repeats (2 copies) A21D_00365 PF13855 Leucine rich repeat A21D_00365 PF08191 LRR adjacent A21D_00365 PF06458 MucBP domain A21D_00369 PF00072 Response regulator receiver domain A21D_00369 PF04397 LytTr DNA-binding domain A21D_00370 PF00465 Iron-containing alcohol dehydrogenase A21D_00370 PF00171 Aldehyde dehydrogenase family A21D_00371 PF12833 Helix-turn-helix domain A21D_00373 PF08000 Bacterial PH domain A21D_00373 PF11724 YvbH-like oligomerisation region A21D_00374 PF00291 Pyridoxal-phosphate dependent enzyme A21D_00376 PF00132 Bacterial transferase hexapeptide (six repeats) A21D_00377 PF03060 Nitronate monooxygenase A21D_00378 PF07848 PaaX-like protein A21D_00378 PF08223 PaaX-like protein C-terminal domain A21D_00379 PF00378 Enoyl-CoA hydratase/isomerase A21D_00380 PF00108 Thiolase, N-terminal domain A21D_00380 PF02803 Thiolase, C-terminal domain A21D_00381 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A21D_00381 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A21D_00382 PF00171 Aldehyde dehydrogenase family A21D_00383 PF00378 Enoyl-CoA hydratase/isomerase A21D_00384 PF00378 Enoyl-CoA hydratase/isomerase A21D_00386 PF01883 Iron-sulfur cluster assembly protein A21D_00389 PF05138 Phenylacetic acid catabolic protein A21D_00390 PF14535 AMP-binding enzyme C-terminal domain A21D_00390 PF00501 AMP-binding enzyme A21D_00391 PF00037 4Fe-4S binding domain A21D_00391 PF12800 4Fe-4S binding domain A21D_00392 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_00393 PF00596 Class II Aldolase and Adducin N-terminal domain A21D_00394 PF00596 Class II Aldolase and Adducin N-terminal domain A21D_00395 PF03611 PTS system sugar-specific permease component A21D_00396 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_00397 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_00402 PF03070 TENA/THI-4/PQQC family A21D_00403 PF00857 Isochorismatase family A21D_00405 PF01116 Fructose-bisphosphate aldolase class-II A21D_00406 PF00205 Thiamine pyrophosphate enzyme, central domain A21D_00406 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_00406 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_00407 PF00294 pfkB family carbohydrate kinase A21D_00408 PF04962 KduI/IolB family A21D_00409 PF00171 Aldehyde dehydrogenase family A21D_00410 PF08220 DeoR-like helix-turn-helix domain A21D_00410 PF00455 DeoR C terminal sensor domain A21D_00411 PF14552 Tautomerase enzyme A21D_00412 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A21D_00412 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A21D_00413 PF00474 Sodium:solute symporter family A21D_00414 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A21D_00414 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A21D_00415 PF01261 Xylose isomerase-like TIM barrel A21D_00416 PF07690 Major Facilitator Superfamily A21D_00417 PF09334 tRNA synthetases class I (M) A21D_00417 PF08264 Anticodon-binding domain of tRNA A21D_00418 PF07075 Protein of unknown function (DUF1343) A21D_00419 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_00420 PF04794 YdjC-like protein A21D_00421 PF02378 Phosphotransferase system, EIIC A21D_00422 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_00423 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_00423 PF02056 Family 4 glycosyl hydrolase A21D_00424 PF08279 HTH domain A21D_00424 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_00424 PF00874 PRD domain A21D_00424 PF05043 Mga helix-turn-helix domain A21D_00425 PF01316 Arginine repressor, DNA binding domain A21D_00425 PF02863 Arginine repressor, C-terminal domain A21D_00426 PF00696 Amino acid kinase family A21D_00427 PF13520 Amino acid permease A21D_00428 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A21D_00428 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A21D_00430 PF00750 tRNA synthetases class I (R) A21D_00430 PF05746 DALR anticodon binding domain A21D_00430 PF03485 Arginyl tRNA synthetase N terminal domain A21D_00432 PF13556 PucR C-terminal helix-turn-helix domain A21D_00432 PF05651 Putative sugar diacid recognition A21D_00432 PF17853 GGDEF-like domain A21D_00433 PF02447 GntP family permease A21D_00434 PF02595 Glycerate kinase family A21D_00435 PF03306 Alpha-acetolactate decarboxylase A21D_00439 PF00245 Alkaline phosphatase A21D_00440 PF03009 Glycerophosphoryl diester phosphodiesterase family A21D_00448 PF01381 Helix-turn-helix A21D_00450 PF02569 Pantoate-beta-alanine ligase A21D_00451 PF02548 Ketopantoate hydroxymethyltransferase A21D_00452 PF00072 Response regulator receiver domain A21D_00452 PF02954 Bacterial regulatory protein, Fis family A21D_00452 PF00158 Sigma-54 interaction domain A21D_00453 PF00293 NUDIX domain A21D_00453 PF13344 Haloacid dehalogenase-like hydrolase A21D_00454 PF13649 Methyltransferase domain A21D_00455 PF00303 Thymidylate synthase A21D_00458 PF01527 Transposase A21D_00461 PF13276 HTH-like domain A21D_00461 PF13333 Integrase core domain A21D_00461 PF00665 Integrase core domain A21D_00465 PF13508 Acetyltransferase (GNAT) domain A21D_00465 PF00583 Acetyltransferase (GNAT) family A21D_00466 PF01418 Helix-turn-helix domain, rpiR family A21D_00466 PF01380 SIS domain A21D_00467 PF07075 Protein of unknown function (DUF1343) A21D_00469 PF00933 Glycosyl hydrolase family 3 N terminal domain A21D_00469 PF01915 Glycosyl hydrolase family 3 C-terminal domain A21D_00471 PF02361 Cobalt transport protein A21D_00472 PF00005 ABC transporter A21D_00473 PF00005 ABC transporter A21D_00476 PF00108 Thiolase, N-terminal domain A21D_00476 PF02803 Thiolase, C-terminal domain A21D_00477 PF00501 AMP-binding enzyme A21D_00477 PF13193 AMP-binding enzyme C-terminal domain A21D_00478 PF02632 BioY family A21D_00479 PF00155 Aminotransferase class I and II A21D_00481 PF02378 Phosphotransferase system, EIIC A21D_00481 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_00482 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_00482 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_00483 PF08279 HTH domain A21D_00483 PF05043 Mga helix-turn-helix domain A21D_00483 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_00483 PF00874 PRD domain A21D_00484 PF00923 Transaldolase/Fructose-6-phosphate aldolase A21D_00486 PF07663 Sorbitol phosphotransferase enzyme II C-terminus A21D_00486 PF03612 Sorbitol phosphotransferase enzyme II N-terminus A21D_00487 PF03608 PTS system enzyme II sorbitol-specific factor A21D_00490 PF00106 short chain dehydrogenase A21D_00492 PF12729 Four helix bundle sensory module for signal transduction A21D_00492 PF00672 HAMP domain A21D_00492 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00493 PF01565 FAD binding domain A21D_00493 PF02913 FAD linked oxidases, C-terminal domain A21D_00495 PF13520 Amino acid permease A21D_00496 PF13840 ACT domain A21D_00496 PF00696 Amino acid kinase family A21D_00497 PF01588 Putative tRNA binding domain A21D_00497 PF08264 Anticodon-binding domain of tRNA A21D_00497 PF09334 tRNA synthetases class I (M) A21D_00500 PF01380 SIS domain A21D_00501 PF01266 FAD dependent oxidoreductase A21D_00503 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) A21D_00504 PF12833 Helix-turn-helix domain A21D_00504 PF02311 AraC-like ligand binding domain A21D_00507 PF01970 Tripartite tricarboxylate transporter TctA family A21D_00511 PF01381 Helix-turn-helix A21D_00513 PF03600 Citrate transporter A21D_00514 PF00072 Response regulator receiver domain A21D_00514 PF12431 Transcriptional regulator A21D_00515 PF17203 Single cache domain 3 A21D_00515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A21D_00515 PF00989 PAS fold A21D_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00524 PF00005 ABC transporter A21D_00525 PF00072 Response regulator receiver domain A21D_00525 PF04397 LytTr DNA-binding domain A21D_00528 PF08279 HTH domain A21D_00528 PF13280 WYL domain A21D_00529 PF01965 DJ-1/PfpI family A21D_00534 PF03816 Cell envelope-related transcriptional attenuator domain A21D_00535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A21D_00535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A21D_00535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A21D_00536 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A21D_00536 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A21D_00536 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A21D_00537 PF01370 NAD dependent epimerase/dehydratase family A21D_00539 PF01943 Polysaccharide biosynthesis protein A21D_00540 PF00534 Glycosyl transferases group 1 A21D_00540 PF13439 Glycosyltransferase Family 4 A21D_00541 PF00534 Glycosyl transferases group 1 A21D_00541 PF13439 Glycosyltransferase Family 4 A21D_00542 PF00534 Glycosyl transferases group 1 A21D_00545 PF02397 Bacterial sugar transferase A21D_00546 PF00483 Nucleotidyl transferase A21D_00547 PF02719 Polysaccharide biosynthesis protein A21D_00548 PF00196 Bacterial regulatory proteins, luxR family A21D_00548 PF00072 Response regulator receiver domain A21D_00550 PF13614 AAA domain A21D_00551 PF02706 Chain length determinant protein A21D_00551 PF13807 G-rich domain on putative tyrosine kinase A21D_00552 PF01476 LysM domain A21D_00552 PF00877 NlpC/P60 family A21D_00553 PF10282 Lactonase, 7-bladed beta-propeller A21D_00555 PF18416 N-acetylglucosamine binding protein domain 2 A21D_00555 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading A21D_00556 PF00392 Bacterial regulatory proteins, gntR family A21D_00556 PF07702 UTRA domain A21D_00557 PF00294 pfkB family carbohydrate kinase A21D_00558 PF03841 L-seryl-tRNA selenium transferase A21D_00559 PF01979 Amidohydrolase family A21D_00560 PF04854 Protein of unknown function, DUF624 A21D_00561 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00562 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00565 PF01894 Uncharacterised protein family UPF0047 A21D_00566 PF13302 Acetyltransferase (GNAT) domain A21D_00569 PF01446 Replication protein A21D_00570 PF07690 Major Facilitator Superfamily A21D_00572 PF00269 Small, acid-soluble spore proteins, alpha/beta type A21D_00573 PF00313 'Cold-shock' DNA-binding domain A21D_00574 PF00403 Heavy-metal-associated domain A21D_00575 PF00403 Heavy-metal-associated domain A21D_00576 PF02583 Metal-sensitive transcriptional repressor A21D_00578 PF02632 BioY family A21D_00579 PF00106 short chain dehydrogenase A21D_00580 PF09515 Thiamine transporter protein (Thia_YuaJ) A21D_00581 PF03413 Peptidase propeptide and YPEB domain A21D_00581 PF02868 Thermolysin metallopeptidase, alpha-helical domain A21D_00581 PF07504 Fungalysin/Thermolysin Propeptide Motif A21D_00581 PF01447 Thermolysin metallopeptidase, catalytic domain A21D_00582 PF06114 IrrE N-terminal-like domain A21D_00586 PF00753 Metallo-beta-lactamase superfamily A21D_00587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00587 PF07730 Histidine kinase A21D_00588 PF00072 Response regulator receiver domain A21D_00588 PF00196 Bacterial regulatory proteins, luxR family A21D_00589 PF01925 Sulfite exporter TauE/SafE A21D_00590 PF01522 Polysaccharide deacetylase A21D_00594 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00594 PF02743 Cache domain A21D_00594 PF00672 HAMP domain A21D_00595 PF00255 Glutathione peroxidase A21D_00597 PF00005 ABC transporter A21D_00598 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00599 PF00497 Bacterial extracellular solute-binding proteins, family 3 A21D_00600 PF01546 Peptidase family M20/M25/M40 A21D_00600 PF07687 Peptidase dimerisation domain A21D_00601 PF09180 Prolyl-tRNA synthetase, C-terminal A21D_00601 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A21D_00601 PF03129 Anticodon binding domain A21D_00602 PF00857 Isochorismatase family A21D_00603 PF04306 Protein of unknown function (DUF456) A21D_00604 PF02660 Glycerol-3-phosphate acyltransferase A21D_00605 PF13539 D-alanyl-D-alanine carboxypeptidase A21D_00607 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A21D_00607 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A21D_00609 PF08546 Ketopantoate reductase PanE/ApbA C terminal A21D_00609 PF02558 Ketopantoate reductase PanE/ApbA A21D_00611 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00612 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00613 PF00005 ABC transporter A21D_00614 PF14168 YjzC-like protein A21D_00615 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A21D_00616 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A21D_00616 PF01565 FAD binding domain A21D_00618 PF02811 PHP domain A21D_00619 PF13393 Histidyl-tRNA synthetase A21D_00620 PF01634 ATP phosphoribosyltransferase A21D_00621 PF00815 Histidinol dehydrogenase A21D_00622 PF00475 Imidazoleglycerol-phosphate dehydratase A21D_00623 PF00117 Glutamine amidotransferase class-I A21D_00624 PF00977 Histidine biosynthesis protein A21D_00625 PF00977 Histidine biosynthesis protein A21D_00626 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A21D_00626 PF01502 Phosphoribosyl-AMP cyclohydrolase A21D_00627 PF00155 Aminotransferase class I and II A21D_00629 PF01497 Periplasmic binding protein A21D_00630 PF00005 ABC transporter A21D_00631 PF01032 FecCD transport family A21D_00632 PF01032 FecCD transport family A21D_00634 PF01323 DSBA-like thioredoxin domain A21D_00635 PF00753 Metallo-beta-lactamase superfamily A21D_00636 PF01070 FMN-dependent dehydrogenase A21D_00637 PF13291 ACT domain A21D_00637 PF04607 Region found in RelA / SpoT proteins A21D_00637 PF02824 TGS domain A21D_00638 PF03193 RsgA GTPase A21D_00639 PF00248 Aldo/keto reductase family A21D_00640 PF12848 ABC transporter A21D_00640 PF16326 ABC transporter C-terminal domain A21D_00640 PF00005 ABC transporter A21D_00642 PF00704 Glycosyl hydrolases family 18 A21D_00642 PF01476 LysM domain A21D_00644 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00644 PF00672 HAMP domain A21D_00644 PF12729 Four helix bundle sensory module for signal transduction A21D_00646 PF12704 MacB-like periplasmic core domain A21D_00646 PF00005 ABC transporter A21D_00646 PF02687 FtsX-like permease family A21D_00648 PF03352 Methyladenine glycosylase A21D_00649 PF00581 Rhodanese-like domain A21D_00650 PF01546 Peptidase family M20/M25/M40 A21D_00650 PF07687 Peptidase dimerisation domain A21D_00655 PF07478 D-ala D-ala ligase C-terminus A21D_00655 PF01820 D-ala D-ala ligase N-terminus A21D_00662 PF00425 chorismate binding enzyme A21D_00662 PF04715 Anthranilate synthase component I, N terminal region A21D_00663 PF00117 Glutamine amidotransferase class-I A21D_00664 PF02885 Glycosyl transferase family, helical bundle domain A21D_00664 PF00591 Glycosyl transferase family, a/b domain A21D_00665 PF00218 Indole-3-glycerol phosphate synthase A21D_00666 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A21D_00667 PF00291 Pyridoxal-phosphate dependent enzyme A21D_00668 PF00290 Tryptophan synthase alpha chain A21D_00671 PF00085 Thioredoxin A21D_00674 PF00005 ABC transporter A21D_00675 PF00392 Bacterial regulatory proteins, gntR family A21D_00676 PF03372 Endonuclease/Exonuclease/phosphatase family A21D_00678 PF00753 Metallo-beta-lactamase superfamily A21D_00684 PF07997 Protein of unknown function (DUF1694) A21D_00685 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_00688 PF01965 DJ-1/PfpI family A21D_00689 PF13193 AMP-binding enzyme C-terminal domain A21D_00689 PF00501 AMP-binding enzyme A21D_00690 PF00474 Sodium:solute symporter family A21D_00697 PF07690 Major Facilitator Superfamily A21D_00699 PF00210 Ferritin-like domain A21D_00700 PF00854 POT family A21D_00703 PF04239 Protein of unknown function (DUF421) A21D_00704 PF02829 3H domain A21D_00704 PF08279 HTH domain A21D_00705 PF00266 Aminotransferase class-V A21D_00706 PF02910 Fumarate reductase flavoprotein C-term A21D_00706 PF00890 FAD binding domain A21D_00707 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A21D_00707 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A21D_00708 PF02445 Quinolinate synthetase A protein A21D_00710 PF02661 Fic/DOC family A21D_00711 PF00746 LPXTG cell wall anchor motif A21D_00711 PF02872 5'-nucleotidase, C-terminal domain A21D_00711 PF00565 Staphylococcal nuclease homologue A21D_00711 PF00149 Calcineurin-like phosphoesterase A21D_00712 PF02557 D-alanyl-D-alanine carboxypeptidase A21D_00713 PF00512 His Kinase A (phospho-acceptor) domain A21D_00713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00714 PF00486 Transcriptional regulatory protein, C terminal A21D_00714 PF00072 Response regulator receiver domain A21D_00715 PF01348 Type II intron maturase A21D_00715 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A21D_00722 PF00005 ABC transporter A21D_00723 PF06508 Queuosine biosynthesis protein QueC A21D_00728 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_00729 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00729 PF00005 ABC transporter A21D_00730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00730 PF00005 ABC transporter A21D_00733 PF08543 Phosphomethylpyrimidine kinase A21D_00734 PF02110 Hydroxyethylthiazole kinase family A21D_00735 PF02581 Thiamine monophosphate synthase A21D_00736 PF01609 Transposase DDE domain A21D_00737 PF07739 TipAS antibiotic-recognition domain A21D_00737 PF13411 MerR HTH family regulatory protein A21D_00738 PF07690 Major Facilitator Superfamily A21D_00742 PF02589 LUD domain A21D_00743 PF02589 LUD domain A21D_00743 PF11870 Domain of unknown function (DUF3390) A21D_00743 PF13183 4Fe-4S dicluster domain A21D_00744 PF02754 Cysteine-rich domain A21D_00745 PF00392 Bacterial regulatory proteins, gntR family A21D_00745 PF07729 FCD domain A21D_00746 PF02652 L-lactate permease A21D_00747 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_00749 PF00394 Multicopper oxidase A21D_00749 PF07731 Multicopper oxidase A21D_00749 PF07732 Multicopper oxidase A21D_00750 PF00742 Homoserine dehydrogenase A21D_00750 PF01842 ACT domain A21D_00750 PF03447 Homoserine dehydrogenase, NAD binding domain A21D_00751 PF00291 Pyridoxal-phosphate dependent enzyme A21D_00752 PF00288 GHMP kinases N terminal domain A21D_00752 PF08544 GHMP kinases C terminal A21D_00753 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A21D_00753 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A21D_00754 PF17785 PUA-like domain A21D_00754 PF10672 S-adenosylmethionine-dependent methyltransferase A21D_00759 PF00005 ABC transporter A21D_00764 PF13520 Amino acid permease A21D_00765 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A21D_00765 PF00703 Glycosyl hydrolases family 2 A21D_00765 PF16353 Domain of unknown function(DUF4981) A21D_00765 PF02929 Beta galactosidase small chain A21D_00765 PF02837 Glycosyl hydrolases family 2, sugar binding domain A21D_00767 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A21D_00768 PF03061 Thioesterase superfamily A21D_00769 PF08712 Scaffold protein Nfu/NifU N terminal A21D_00769 PF13769 Virulence factor A21D_00771 PF00294 pfkB family carbohydrate kinase A21D_00772 PF00455 DeoR C terminal sensor domain A21D_00772 PF08220 DeoR-like helix-turn-helix domain A21D_00775 PF01047 MarR family A21D_00776 PF01738 Dienelactone hydrolase family A21D_00777 PF01699 Sodium/calcium exchanger protein A21D_00778 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A21D_00780 PF00924 Mechanosensitive ion channel A21D_00781 PF00293 NUDIX domain A21D_00782 PF04055 Radical SAM superfamily A21D_00782 PF08756 YfkB-like domain A21D_00783 PF12787 EcsC protein family A21D_00784 PF00392 Bacterial regulatory proteins, gntR family A21D_00784 PF07729 FCD domain A21D_00785 PF05525 Branched-chain amino acid transport protein A21D_00787 PF00664 ABC transporter transmembrane region A21D_00787 PF00005 ABC transporter A21D_00789 PF00005 ABC transporter A21D_00789 PF13732 Domain of unknown function (DUF4162) A21D_00790 PF00440 Bacterial regulatory proteins, tetR family A21D_00791 PF00925 GTP cyclohydrolase II A21D_00791 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A21D_00792 PF01872 RibD C-terminal domain A21D_00792 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A21D_00793 PF06580 Histidine kinase A21D_00793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00795 PF00005 ABC transporter A21D_00795 PF00664 ABC transporter transmembrane region A21D_00796 PF00664 ABC transporter transmembrane region A21D_00796 PF00005 ABC transporter A21D_00797 PF02322 Cytochrome bd terminal oxidase subunit II A21D_00798 PF01654 Cytochrome bd terminal oxidase subunit I A21D_00799 PF06271 RDD family A21D_00800 PF01343 Peptidase family S49 A21D_00801 PF08543 Phosphomethylpyrimidine kinase A21D_00802 PF08264 Anticodon-binding domain of tRNA A21D_00802 PF00133 tRNA synthetases class I (I, L, M and V) A21D_00804 PF13538 UvrD-like helicase C-terminal domain A21D_00806 PF03860 Domain of Unknown Function (DUF326) A21D_00807 PF07563 Protein of unknown function (DUF1541) A21D_00810 PF03551 Transcriptional regulator PadR-like family A21D_00815 PF02386 Cation transport protein A21D_00816 PF00403 Heavy-metal-associated domain A21D_00817 PF01022 Bacterial regulatory protein, arsR family A21D_00820 PF00512 His Kinase A (phospho-acceptor) domain A21D_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_00820 PF00672 HAMP domain A21D_00821 PF00486 Transcriptional regulatory protein, C terminal A21D_00821 PF00072 Response regulator receiver domain A21D_00822 PF01609 Transposase DDE domain A21D_00823 PF01609 Transposase DDE domain A21D_00824 PF13180 PDZ domain A21D_00826 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) A21D_00827 PF01258 Prokaryotic dksA/traR C4-type zinc finger A21D_00828 PF13673 Acetyltransferase (GNAT) domain A21D_00829 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A21D_00829 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A21D_00832 PF01209 ubiE/COQ5 methyltransferase family A21D_00835 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_00836 PF00294 pfkB family carbohydrate kinase A21D_00837 PF01116 Fructose-bisphosphate aldolase class-II A21D_00838 PF01979 Amidohydrolase family A21D_00840 PF03613 PTS system mannose/fructose/sorbose family IID component A21D_00841 PF03609 PTS system sorbose-specific iic component A21D_00842 PF03830 PTS system sorbose subfamily IIB component A21D_00843 PF01380 SIS domain A21D_00845 PF08241 Methyltransferase domain A21D_00847 PF00480 ROK family A21D_00847 PF01047 MarR family A21D_00849 PF10509 Galactokinase galactose-binding signature A21D_00849 PF08544 GHMP kinases C terminal A21D_00849 PF00288 GHMP kinases N terminal domain A21D_00850 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A21D_00850 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A21D_00851 PF01263 Aldose 1-epimerase A21D_00853 PF00293 NUDIX domain A21D_00857 PF03816 Cell envelope-related transcriptional attenuator domain A21D_00858 PF03808 Glycosyl transferase WecB/TagA/CpsF family A21D_00859 PF08239 Bacterial SH3 domain A21D_00859 PF00005 ABC transporter A21D_00860 PF01061 ABC-2 type transporter A21D_00861 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase A21D_00862 PF01467 Cytidylyltransferase-like A21D_00863 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase A21D_00864 PF03816 Cell envelope-related transcriptional attenuator domain A21D_00866 PF00953 Glycosyl transferase family 4 A21D_00873 PF05036 Sporulation related domain A21D_00873 PF08239 Bacterial SH3 domain A21D_00873 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A21D_00874 PF00535 Glycosyl transferase family 2 A21D_00876 PF00005 ABC transporter A21D_00877 PF01061 ABC-2 type transporter A21D_00878 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A21D_00878 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A21D_00878 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A21D_00879 PF00534 Glycosyl transferases group 1 A21D_00879 PF13439 Glycosyltransferase Family 4 A21D_00881 PF03009 Glycerophosphoryl diester phosphodiesterase family A21D_00884 PF00746 LPXTG cell wall anchor motif A21D_00884 PF02225 PA domain A21D_00884 PF06280 Fn3-like domain A21D_00884 PF00082 Subtilase family A21D_00885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A21D_00885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A21D_00886 PF00953 Glycosyl transferase family 4 A21D_00888 PF07475 HPr Serine kinase C-terminal domain A21D_00888 PF02603 HPr Serine kinase N terminus A21D_00889 PF00398 Ribosomal RNA adenine dimethylase A21D_00890 PF04055 Radical SAM superfamily A21D_00890 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A21D_00891 PF03099 Biotin/lipoate A/B protein ligase family A21D_00892 PF01418 Helix-turn-helix domain, rpiR family A21D_00892 PF01380 SIS domain A21D_00893 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase A21D_00894 PF02378 Phosphotransferase system, EIIC A21D_00894 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A21D_00894 PF00367 phosphotransferase system, EIIB A21D_00896 PF01609 Transposase DDE domain A21D_00897 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_00898 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_00899 PF02378 Phosphotransferase system, EIIC A21D_00900 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_00900 PF02056 Family 4 glycosyl hydrolase A21D_00902 PF04794 YdjC-like protein A21D_00905 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A21D_00905 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A21D_00906 PF00873 AcrB/AcrD/AcrF family A21D_00911 PF07977 FabA-like domain A21D_00913 PF00460 Flagella basal body rod protein A21D_00913 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A21D_00914 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A21D_00914 PF00460 Flagella basal body rod protein A21D_00916 PF12116 Stage III sporulation protein D A21D_00918 PF08486 Stage II sporulation protein A21D_00919 PF00005 ABC transporter A21D_00919 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00920 PF00877 NlpC/P60 family A21D_00921 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_00922 PF00005 ABC transporter A21D_00922 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_00923 PF12911 N-terminal TM domain of oligopeptide transport permease C A21D_00923 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00924 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00925 PF04951 D-aminopeptidase A21D_00926 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A21D_00928 PF06612 Protein of unknown function (DUF1146) A21D_00929 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A21D_00929 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A21D_00930 PF02874 ATP synthase alpha/beta family, beta-barrel domain A21D_00930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A21D_00931 PF00231 ATP synthase A21D_00932 PF02874 ATP synthase alpha/beta family, beta-barrel domain A21D_00932 PF00306 ATP synthase alpha/beta chain, C terminal domain A21D_00932 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A21D_00933 PF00213 ATP synthase delta (OSCP) subunit A21D_00934 PF00430 ATP synthase B/B' CF(0) A21D_00935 PF00137 ATP synthase subunit C A21D_00936 PF00119 ATP synthase A chain A21D_00937 PF03899 ATP synthase I chain A21D_00938 PF13860 FlgD Ig-like domain A21D_00938 PF05922 Peptidase inhibitor I9 A21D_00938 PF02225 PA domain A21D_00938 PF00082 Subtilase family A21D_00939 PF02350 UDP-N-acetylglucosamine 2-epimerase A21D_00941 PF01609 Transposase DDE domain A21D_00942 PF00464 Serine hydroxymethyltransferase A21D_00943 PF04260 Protein of unknown function (DUF436) A21D_00944 PF02502 Ribose/Galactose Isomerase A21D_00945 PF02743 Cache domain A21D_00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_00945 PF00672 HAMP domain A21D_00946 PF01451 Low molecular weight phosphotyrosine protein phosphatase A21D_00947 PF02659 Putative manganese efflux pump A21D_00949 PF01300 Telomere recombination A21D_00949 PF03481 Putative GTP-binding controlling metal-binding A21D_00951 PF09551 Stage II sporulation protein R (spore_II_R) A21D_00952 PF17827 PrmC N-terminal domain A21D_00952 PF13847 Methyltransferase domain A21D_00953 PF00472 RF-1 domain A21D_00953 PF03462 PCRF domain A21D_00954 PF00265 Thymidine kinase A21D_00955 PF01197 Ribosomal protein L31 A21D_00956 PF07498 Rho termination factor, N-terminal domain A21D_00956 PF07497 Rho termination factor, RNA-binding domain A21D_00956 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A21D_00957 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A21D_00958 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A21D_00959 PF00923 Transaldolase/Fructose-6-phosphate aldolase A21D_00960 PF01116 Fructose-bisphosphate aldolase class-II A21D_00962 PF06418 CTP synthase N-terminus A21D_00962 PF00117 Glutamine amidotransferase class-I A21D_00963 PF05066 HB1, ASXL, restriction endonuclease HTH domain A21D_00964 PF00440 Bacterial regulatory proteins, tetR family A21D_00964 PF13977 BetI-type transcriptional repressor, C-terminal A21D_00965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_00965 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_00965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_00966 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_00966 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_00966 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_00967 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A21D_00967 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A21D_00968 PF00108 Thiolase, N-terminal domain A21D_00968 PF02803 Thiolase, C-terminal domain A21D_00969 PF13183 4Fe-4S dicluster domain A21D_00969 PF02754 Cysteine-rich domain A21D_00970 PF01228 Glycine radical A21D_00970 PF02901 Pyruvate formate lyase-like A21D_00971 PF04055 Radical SAM superfamily A21D_00972 PF00750 tRNA synthetases class I (R) A21D_00972 PF05746 DALR anticodon binding domain A21D_00972 PF03485 Arginyl tRNA synthetase N terminal domain A21D_00974 PF04854 Protein of unknown function, DUF624 A21D_00975 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00976 PF00528 Binding-protein-dependent transport system inner membrane component A21D_00977 PF01547 Bacterial extracellular solute-binding protein A21D_00978 PF01547 Bacterial extracellular solute-binding protein A21D_00979 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A21D_00979 PF00056 lactate/malate dehydrogenase, NAD binding domain A21D_00980 PF00905 Penicillin binding protein transpeptidase domain A21D_00980 PF00912 Transglycosylase A21D_00981 PF08741 YwhD family A21D_00983 PF01966 HD domain A21D_00984 PF03099 Biotin/lipoate A/B protein ligase family A21D_00985 PF01515 Phosphate acetyl/butaryl transferase A21D_00987 PF07486 Cell Wall Hydrolase A21D_00988 PF09671 Spore coat protein (Spore_GerQ) A21D_00990 PF04241 Protein of unknown function (DUF423) A21D_00994 PF03109 ABC1 family A21D_00996 PF01757 Acyltransferase family A21D_00997 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A21D_00998 PF00933 Glycosyl hydrolase family 3 N terminal domain A21D_00998 PF14310 Fibronectin type III-like domain A21D_00998 PF01915 Glycosyl hydrolase family 3 C-terminal domain A21D_01000 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01001 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01002 PF00356 Bacterial regulatory proteins, lacI family A21D_01006 PF00440 Bacterial regulatory proteins, tetR family A21D_01008 PF00005 ABC transporter A21D_01009 PF00106 short chain dehydrogenase A21D_01011 PF00005 ABC transporter A21D_01012 PF13411 MerR HTH family regulatory protein A21D_01013 PF02361 Cobalt transport protein A21D_01014 PF00005 ABC transporter A21D_01015 PF00005 ABC transporter A21D_01018 PF00501 AMP-binding enzyme A21D_01018 PF13193 AMP-binding enzyme C-terminal domain A21D_01019 PF02632 BioY family A21D_01020 PF01979 Amidohydrolase family A21D_01020 PF13382 Adenine deaminase C-terminal domain A21D_01021 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_01021 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_01021 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_01023 PF01938 TRAM domain A21D_01023 PF05958 tRNA (Uracil-5-)-methyltransferase A21D_01024 PF01810 LysE type translocator A21D_01025 PF00583 Acetyltransferase (GNAT) family A21D_01026 PF01966 HD domain A21D_01028 PF13302 Acetyltransferase (GNAT) domain A21D_01029 PF09587 Bacterial capsule synthesis protein PGA_cap A21D_01031 PF00155 Aminotransferase class I and II A21D_01032 PF00202 Aminotransferase class-III A21D_01033 PF03744 6-carboxyhexanoate--CoA ligase A21D_01036 PF00730 HhH-GPD superfamily base excision DNA repair protein A21D_01036 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain A21D_01037 PF12833 Helix-turn-helix domain A21D_01037 PF02805 Metal binding domain of Ada A21D_01038 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A21D_01038 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A21D_01044 PF02311 AraC-like ligand binding domain A21D_01044 PF12833 Helix-turn-helix domain A21D_01045 PF12833 Helix-turn-helix domain A21D_01045 PF06445 GyrI-like small molecule binding domain A21D_01047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_01047 PF03466 LysR substrate binding domain A21D_01051 PF05675 Protein of unknown function (DUF817) A21D_01052 PF13443 Cro/C1-type HTH DNA-binding domain A21D_01053 PF11188 Protein of unknown function (DUF2975) A21D_01058 PF00440 Bacterial regulatory proteins, tetR family A21D_01059 PF00144 Beta-lactamase A21D_01066 PF12746 GNAT acetyltransferase A21D_01067 PF00326 Prolyl oligopeptidase family A21D_01067 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A21D_01069 PF02567 Phenazine biosynthesis-like protein A21D_01070 PF01380 SIS domain A21D_01075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01076 PF02502 Ribose/Galactose Isomerase A21D_01077 PF02502 Ribose/Galactose Isomerase A21D_01078 PF00455 DeoR C terminal sensor domain A21D_01078 PF08220 DeoR-like helix-turn-helix domain A21D_01079 PF00326 Prolyl oligopeptidase family A21D_01081 PF00005 ABC transporter A21D_01082 PF02687 FtsX-like permease family A21D_01083 PF00512 His Kinase A (phospho-acceptor) domain A21D_01083 PF16736 Single Cache-like A21D_01083 PF00989 PAS fold A21D_01083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01084 PF00072 Response regulator receiver domain A21D_01084 PF00486 Transcriptional regulatory protein, C terminal A21D_01085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A21D_01085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A21D_01085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A21D_01085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A21D_01087 PF02457 DisA bacterial checkpoint controller nucleotide-binding A21D_01088 PF13490 Putative zinc-finger A21D_01089 PF04542 Sigma-70 region 2 A21D_01089 PF08281 Sigma-70, region 4 A21D_01091 PF00491 Arginase family A21D_01092 PF00005 ABC transporter A21D_01092 PF08402 TOBE domain A21D_01093 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01095 PF01975 Survival protein SurE A21D_01097 PF14716 Helix-hairpin-helix domain A21D_01097 PF02811 PHP domain A21D_01097 PF14791 DNA polymerase beta thumb A21D_01098 PF08544 GHMP kinases C terminal A21D_01098 PF00288 GHMP kinases N terminal domain A21D_01100 PF00288 GHMP kinases N terminal domain A21D_01100 PF08544 GHMP kinases C terminal A21D_01100 PF10509 Galactokinase galactose-binding signature A21D_01101 PF00368 Hydroxymethylglutaryl-coenzyme A reductase A21D_01110 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_01110 PF05036 Sporulation related domain A21D_01111 PF04688 SPP1 phage holin A21D_01127 PF06114 IrrE N-terminal-like domain A21D_01128 PF08267 Cobalamin-independent synthase, N-terminal domain A21D_01128 PF01717 Cobalamin-independent synthase, Catalytic domain A21D_01129 PF02219 Methylenetetrahydrofolate reductase A21D_01129 PF02574 Homocysteine S-methyltransferase A21D_01131 PF00005 ABC transporter A21D_01133 PF00027 Cyclic nucleotide-binding domain A21D_01133 PF13545 Crp-like helix-turn-helix domain A21D_01134 PF00403 Heavy-metal-associated domain A21D_01135 PF00403 Heavy-metal-associated domain A21D_01141 PF04740 LXG domain of WXG superfamily A21D_01141 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH A21D_01154 PF01522 Polysaccharide deacetylase A21D_01155 PF14089 KinB-signalling pathway activation in sporulation A21D_01156 PF17898 Spore germination GerD central core domain A21D_01157 PF10609 NUBPL iron-transfer P-loop NTPase A21D_01158 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_01162 PF03631 Virulence factor BrkB A21D_01165 PF00092 von Willebrand factor type A domain A21D_01166 PF07728 AAA domain (dynein-related subfamily) A21D_01167 PF16884 N-terminal domain of oxidoreductase A21D_01167 PF00107 Zinc-binding dehydrogenase A21D_01168 PF00596 Class II Aldolase and Adducin N-terminal domain A21D_01169 PF01008 Initiation factor 2 subunit family A21D_01170 PF01636 Phosphotransferase enzyme family A21D_01172 PF08220 DeoR-like helix-turn-helix domain A21D_01172 PF00455 DeoR C terminal sensor domain A21D_01173 PF00465 Iron-containing alcohol dehydrogenase A21D_01176 PF01758 Sodium Bile acid symporter family A21D_01179 PF08402 TOBE domain A21D_01179 PF00005 ABC transporter A21D_01180 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01182 PF00459 Inositol monophosphatase family A21D_01183 PF00356 Bacterial regulatory proteins, lacI family A21D_01184 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01185 PF00005 ABC transporter A21D_01186 PF01497 Periplasmic binding protein A21D_01187 PF01032 FecCD transport family A21D_01188 PF01032 FecCD transport family A21D_01190 PF04203 Sortase domain A21D_01191 PF00005 ABC transporter A21D_01192 PF01032 FecCD transport family A21D_01193 PF01497 Periplasmic binding protein A21D_01194 PF05031 Iron Transport-associated domain A21D_01195 PF05031 Iron Transport-associated domain A21D_01196 PF05031 Iron Transport-associated domain A21D_01197 PF01497 Periplasmic binding protein A21D_01198 PF01032 FecCD transport family A21D_01199 PF00005 ABC transporter A21D_01201 PF08222 CodY helix-turn-helix domain A21D_01201 PF06018 CodY GAF-like domain A21D_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_01205 PF03466 LysR substrate binding domain A21D_01206 PF02558 Ketopantoate reductase PanE/ApbA A21D_01206 PF08546 Ketopantoate reductase PanE/ApbA C terminal A21D_01207 PF00871 Acetokinase family A21D_01208 PF01515 Phosphate acetyl/butaryl transferase A21D_01210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_01210 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01211 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A21D_01211 PF02817 e3 binding domain A21D_01211 PF00364 Biotin-requiring enzyme A21D_01212 PF02780 Transketolase, C-terminal domain A21D_01212 PF02779 Transketolase, pyrimidine binding domain A21D_01213 PF00676 Dehydrogenase E1 component A21D_01219 PF13411 MerR HTH family regulatory protein A21D_01222 PF01032 FecCD transport family A21D_01223 PF00005 ABC transporter A21D_01224 PF07690 Major Facilitator Superfamily A21D_01226 PF01032 FecCD transport family A21D_01227 PF01032 FecCD transport family A21D_01228 PF00005 ABC transporter A21D_01229 PF00005 ABC transporter A21D_01232 PF00664 ABC transporter transmembrane region A21D_01232 PF00005 ABC transporter A21D_01233 PF00005 ABC transporter A21D_01233 PF00664 ABC transporter transmembrane region A21D_01234 PF12833 Helix-turn-helix domain A21D_01236 PF04072 Leucine carboxyl methyltransferase A21D_01237 PF10026 Predicted Zn-dependent protease (DUF2268) A21D_01239 PF02687 FtsX-like permease family A21D_01240 PF00005 ABC transporter A21D_01241 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01242 PF00486 Transcriptional regulatory protein, C terminal A21D_01242 PF00072 Response regulator receiver domain A21D_01250 PF01609 Transposase DDE domain A21D_01264 PF01797 Transposase IS200 like A21D_01265 PF00380 Ribosomal protein S9/S16 A21D_01266 PF00572 Ribosomal protein L13 A21D_01267 PF01416 tRNA pseudouridine synthase A21D_01268 PF02361 Cobalt transport protein A21D_01269 PF00005 ABC transporter A21D_01270 PF00005 ABC transporter A21D_01271 PF01196 Ribosomal protein L17 A21D_01272 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A21D_01272 PF01000 RNA polymerase Rpb3/RpoA insert domain A21D_01272 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A21D_01273 PF00411 Ribosomal protein S11 A21D_01274 PF00416 Ribosomal protein S13/S18 A21D_01275 PF00444 Ribosomal protein L36 A21D_01276 PF01176 Translation initiation factor 1A / IF-1 A21D_01278 PF05191 Adenylate kinase, active site lid A21D_01279 PF00344 SecY translocase A21D_01280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A21D_01281 PF00327 Ribosomal protein L30p/L7e A21D_01282 PF03719 Ribosomal protein S5, C-terminal domain A21D_01282 PF00333 Ribosomal protein S5, N-terminal domain A21D_01283 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A21D_01284 PF00347 Ribosomal protein L6 A21D_01285 PF00410 Ribosomal protein S8 A21D_01286 PF00253 Ribosomal protein S14p/S29e A21D_01287 PF00673 ribosomal L5P family C-terminus A21D_01287 PF00281 Ribosomal protein L5 A21D_01288 PF00467 KOW motif A21D_01288 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A21D_01289 PF00238 Ribosomal protein L14p/L23e A21D_01290 PF00366 Ribosomal protein S17 A21D_01291 PF00831 Ribosomal L29 protein A21D_01292 PF00252 Ribosomal protein L16p/L10e A21D_01293 PF00189 Ribosomal protein S3, C-terminal domain A21D_01293 PF07650 KH domain A21D_01294 PF00237 Ribosomal protein L22p/L17e A21D_01295 PF00203 Ribosomal protein S19 A21D_01296 PF03947 Ribosomal Proteins L2, C-terminal domain A21D_01296 PF00181 Ribosomal Proteins L2, RNA binding domain A21D_01297 PF00276 Ribosomal protein L23 A21D_01298 PF00573 Ribosomal protein L4/L1 family A21D_01299 PF00297 Ribosomal protein L3 A21D_01300 PF00338 Ribosomal protein S10p/S20e A21D_01301 PF00009 Elongation factor Tu GTP binding domain A21D_01301 PF03144 Elongation factor Tu domain 2 A21D_01301 PF03143 Elongation factor Tu C-terminal domain A21D_01302 PF03144 Elongation factor Tu domain 2 A21D_01302 PF00679 Elongation factor G C-terminus A21D_01302 PF00009 Elongation factor Tu GTP binding domain A21D_01302 PF03764 Elongation factor G, domain IV A21D_01302 PF14492 Elongation Factor G, domain II A21D_01303 PF00177 Ribosomal protein S7p/S5e A21D_01304 PF00164 Ribosomal protein S12/S23 A21D_01305 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family A21D_01306 PF05000 RNA polymerase Rpb1, domain 4 A21D_01306 PF04983 RNA polymerase Rpb1, domain 3 A21D_01306 PF00623 RNA polymerase Rpb1, domain 2 A21D_01306 PF04997 RNA polymerase Rpb1, domain 1 A21D_01306 PF04998 RNA polymerase Rpb1, domain 5 A21D_01307 PF04560 RNA polymerase Rpb2, domain 7 A21D_01307 PF10385 RNA polymerase beta subunit external 1 domain A21D_01307 PF04565 RNA polymerase Rpb2, domain 3 A21D_01307 PF00562 RNA polymerase Rpb2, domain 6 A21D_01307 PF04561 RNA polymerase Rpb2, domain 2 A21D_01307 PF04563 RNA polymerase beta subunit A21D_01308 PF05175 Methyltransferase small domain A21D_01310 PF00466 Ribosomal protein L10 A21D_01311 PF00687 Ribosomal protein L1p/L10e family A21D_01312 PF00298 Ribosomal protein L11, RNA binding domain A21D_01312 PF03946 Ribosomal protein L11, N-terminal domain A21D_01313 PF00467 KOW motif A21D_01313 PF02357 Transcription termination factor nusG A21D_01314 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A21D_01315 PF00471 Ribosomal protein L33 A21D_01316 PF08281 Sigma-70, region 4 A21D_01316 PF04542 Sigma-70 region 2 A21D_01317 PF05991 YacP-like NYN domain A21D_01318 PF08032 RNA 2'-O ribose methyltransferase substrate binding A21D_01318 PF00588 SpoU rRNA Methylase family A21D_01319 PF00636 Ribonuclease III domain A21D_01320 PF09190 DALR domain A21D_01320 PF01406 tRNA synthetases class I (C) catalytic domain A21D_01321 PF00132 Bacterial transferase hexapeptide (six repeats) A21D_01321 PF06426 Serine acetyltransferase, N-terminal A21D_01322 PF00749 tRNA synthetases class I (E and Q), catalytic domain A21D_01325 PF18073 Rubredoxin metal binding domain A21D_01327 PF17871 AAA lid domain A21D_01327 PF00004 ATPase family associated with various cellular activities (AAA) A21D_01327 PF10431 C-terminal, D2-small domain, of ClpB protein A21D_01327 PF02861 Clp amino terminal domain, pathogenicity island component A21D_01327 PF07724 AAA domain (Cdc48 subfamily) A21D_01328 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain A21D_01329 PF02151 UvrB/uvrC motif A21D_01330 PF05848 CtsR N-terminal HTH domain A21D_01330 PF17727 CtsR C-terminal dimerization domain A21D_01332 PF02308 MgtC family A21D_01349 PF01336 OB-fold nucleic acid binding domain A21D_01349 PF00152 tRNA synthetases class II (D, K and N) A21D_01350 PF01381 Helix-turn-helix A21D_01351 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A21D_01352 PF02152 Dihydroneopterin aldolase A21D_01353 PF00809 Pterin binding enzyme A21D_01354 PF00291 Pyridoxal-phosphate dependent enzyme A21D_01356 PF01430 Hsp33 protein A21D_01357 PF03309 Type III pantothenate kinase A21D_01358 PF01434 Peptidase family M41 A21D_01358 PF06480 FtsH Extracellular A21D_01358 PF17862 AAA+ lid domain A21D_01358 PF00004 ATPase family associated with various cellular activities (AAA) A21D_01360 PF01171 PP-loop family A21D_01360 PF11734 TilS substrate C-terminal domain A21D_01361 PF00069 Protein kinase domain A21D_01362 PF00092 von Willebrand factor type A domain A21D_01363 PF07228 Stage II sporulation protein E (SpoIIE) A21D_01365 PF00575 S1 RNA binding domain A21D_01368 PF07873 YabP family A21D_01369 PF01479 S4 domain A21D_01370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A21D_01370 PF03819 MazG nucleotide pyrophosphohydrolase domain A21D_01371 PF14667 Polysaccharide biosynthesis C-terminal domain A21D_01371 PF01943 Polysaccharide biosynthesis protein A21D_01372 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin A21D_01372 PF15714 Stage V sporulation protein T C-terminal, transcription factor A21D_01373 PF00271 Helicase conserved C-terminal domain A21D_01373 PF17757 UvrB interaction domain A21D_01373 PF02559 CarD-like/TRCF domain A21D_01373 PF00270 DEAD/DEAH box helicase A21D_01373 PF03461 TRCF domain A21D_01374 PF10955 Protein of unknown function (DUF2757) A21D_01375 PF01195 Peptidyl-tRNA hydrolase A21D_01376 PF01386 Ribosomal L25p family A21D_01376 PF14693 Ribosomal protein TL5, C-terminal domain A21D_01377 PF14572 Phosphoribosyl synthetase-associated domain A21D_01377 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A21D_01378 PF00132 Bacterial transferase hexapeptide (six repeats) A21D_01378 PF00483 Nucleotidyl transferase A21D_01379 PF04026 SpoVG A21D_01380 PF00156 Phosphoribosyl transferase domain A21D_01380 PF09182 Bacterial purine repressor, N-terminal A21D_01381 PF00288 GHMP kinases N terminal domain A21D_01381 PF08544 GHMP kinases C terminal A21D_01382 PF00269 Small, acid-soluble spore proteins, alpha/beta type A21D_01383 PF06257 Biofilm formation stimulator VEG A21D_01384 PF05582 YabG peptidase U57 A21D_01385 PF00398 Ribosomal RNA adenine dimethylase A21D_01386 PF13662 Toprim domain A21D_01386 PF13331 Domain of unknown function (DUF4093) A21D_01387 PF07501 G5 domain A21D_01387 PF03990 G5-linked-Ubiquitin-like domain A21D_01387 PF06725 3D domain A21D_01388 PF01026 TatD related DNase A21D_01389 PF01588 Putative tRNA binding domain A21D_01389 PF09334 tRNA synthetases class I (M) A21D_01389 PF08264 Anticodon-binding domain of tRNA A21D_01390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin A21D_01390 PF18277 AbrB C-terminal domain A21D_01391 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A21D_01392 PF01541 GIY-YIG catalytic domain A21D_01393 PF05175 Methyltransferase small domain A21D_01394 PF06156 Initiation control protein YabA A21D_01395 PF04468 PSP1 C-terminal conserved region A21D_01396 PF09115 DNA polymerase III, delta subunit, C terminal A21D_01397 PF03885 Protein of unknown function (DUF327) A21D_01398 PF06153 Cyclic-di-AMP receptor A21D_01399 PF02223 Thymidylate kinase A21D_01400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain A21D_01400 PF01276 Orn/Lys/Arg decarboxylase, major domain A21D_01401 PF10764 Inhibitor of sigma-G Gin A21D_01402 PF07441 SigmaK-factor processing regulatory protein BofA A21D_01404 PF02132 RecR protein A21D_01404 PF13662 Toprim domain A21D_01405 PF02575 YbaB/EbfC DNA-binding family A21D_01406 PF12169 DNA polymerase III subunits gamma and tau domain III A21D_01407 PF00484 Carbonic anhydrase A21D_01408 PF14437 MafB19-like deaminase A21D_01409 PF00857 Isochorismatase family A21D_01410 PF00704 Glycosyl hydrolases family 18 A21D_01410 PF01476 LysM domain A21D_01411 PF01965 DJ-1/PfpI family A21D_01412 PF02082 Transcriptional regulator A21D_01413 PF00042 Globin A21D_01413 PF00970 Oxidoreductase FAD-binding domain A21D_01413 PF00175 Oxidoreductase NAD-binding domain A21D_01418 PF13193 AMP-binding enzyme C-terminal domain A21D_01418 PF00501 AMP-binding enzyme A21D_01424 PF00375 Sodium:dicarboxylate symporter family A21D_01425 PF04055 Radical SAM superfamily A21D_01425 PF06968 Biotin and Thiamin Synthesis associated domain A21D_01426 PF01966 HD domain A21D_01427 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01427 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A21D_01428 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_01429 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01430 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01431 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_01431 PF00005 ABC transporter A21D_01432 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_01432 PF00005 ABC transporter A21D_01434 PF03932 CutC family A21D_01435 PF03070 TENA/THI-4/PQQC family A21D_01436 PF00486 Transcriptional regulatory protein, C terminal A21D_01436 PF00072 Response regulator receiver domain A21D_01437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01437 PF00512 His Kinase A (phospho-acceptor) domain A21D_01437 PF16736 Single Cache-like A21D_01437 PF00989 PAS fold A21D_01439 PF02557 D-alanyl-D-alanine carboxypeptidase A21D_01440 PF08239 Bacterial SH3 domain A21D_01440 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_01441 PF18665 Tetracyclin repressor-like, C-terminal domain A21D_01441 PF00440 Bacterial regulatory proteins, tetR family A21D_01443 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_01443 PF02056 Family 4 glycosyl hydrolase A21D_01444 PF00367 phosphotransferase system, EIIB A21D_01444 PF02378 Phosphotransferase system, EIIC A21D_01446 PF01418 Helix-turn-helix domain, rpiR family A21D_01446 PF01380 SIS domain A21D_01449 PF01712 Deoxynucleoside kinase A21D_01450 PF01712 Deoxynucleoside kinase A21D_01451 PF03807 NADP oxidoreductase coenzyme F420-dependent A21D_01451 PF14748 Pyrroline-5-carboxylate reductase dimerisation A21D_01455 PF03180 NLPA lipoprotein A21D_01456 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01457 PF09383 NIL domain A21D_01457 PF00005 ABC transporter A21D_01458 PF02403 Seryl-tRNA synthetase N-terminal domain A21D_01458 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A21D_01459 PF01174 SNO glutamine amidotransferase family A21D_01460 PF01680 SOR/SNZ family A21D_01461 PF07943 Penicillin-binding protein 5, C-terminal domain A21D_01461 PF00768 D-alanyl-D-alanine carboxypeptidase A21D_01462 PF00571 CBS domain A21D_01462 PF00478 IMP dehydrogenase / GMP reductase domain A21D_01463 PF14175 YaaC-like Protein A21D_01464 PF01966 HD domain A21D_01465 PF00521 DNA gyrase/topoisomerase IV, subunit A A21D_01465 PF03989 DNA gyrase C-terminal domain, beta-propeller A21D_01466 PF00986 DNA gyrase B subunit, carboxyl terminus A21D_01466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01466 PF01751 Toprim domain A21D_01466 PF00204 DNA gyrase B A21D_01467 PF04025 Domain of unknown function (DUF370) A21D_01468 PF02463 RecF/RecN/SMC N terminal domain A21D_01470 PF02768 DNA polymerase III beta subunit, C-terminal domain A21D_01470 PF02767 DNA polymerase III beta subunit, central domain A21D_01470 PF00712 DNA polymerase III beta subunit, N-terminal domain A21D_01471 PF08299 Bacterial dnaA protein helix-turn-helix A21D_01471 PF00308 Bacterial dnaA protein A21D_01471 PF11638 DnaA N-terminal domain A21D_01472 PF00468 Ribosomal protein L34 A21D_01473 PF00825 Ribonuclease P A21D_01474 PF02096 60Kd inner membrane protein A21D_01475 PF14804 Jag N-terminus A21D_01475 PF01424 R3H domain A21D_01476 PF12631 MnmE helical domain A21D_01476 PF01926 50S ribosome-binding GTPase A21D_01476 PF10396 GTP-binding protein TrmE N-terminus A21D_01477 PF01134 Glucose inhibited division protein A A21D_01477 PF13932 GidA associated domain A21D_01478 PF02527 rRNA small subunit methyltransferase G A21D_01479 PF17762 HTH domain found in ParB protein A21D_01479 PF02195 ParB-like nuclease domain A21D_01480 PF13614 AAA domain A21D_01481 PF02195 ParB-like nuclease domain A21D_01481 PF17762 HTH domain found in ParB protein A21D_01484 PF06866 Protein of unknown function (DUF1256) A21D_01486 PF00924 Mechanosensitive ion channel A21D_01488 PF06107 Bacterial protein of unknown function (DUF951) A21D_01489 PF01926 50S ribosome-binding GTPase A21D_01489 PF06071 Protein of unknown function (DUF933) A21D_01490 PF01250 Ribosomal protein S6 A21D_01491 PF00436 Single-strand binding protein family A21D_01492 PF01084 Ribosomal protein S18 A21D_01495 PF09991 Predicted membrane protein (DUF2232) A21D_01496 PF01368 DHH family A21D_01496 PF02272 DHHA1 domain A21D_01497 PF01281 Ribosomal protein L9, N-terminal domain A21D_01497 PF03948 Ribosomal protein L9, C-terminal domain A21D_01498 PF03796 DnaB-like helicase C terminal domain A21D_01498 PF00772 DnaB-like helicase N terminal domain A21D_01499 PF00709 Adenylosuccinate synthetase A21D_01500 PF01609 Transposase DDE domain A21D_01501 PF00486 Transcriptional regulatory protein, C terminal A21D_01501 PF00072 Response regulator receiver domain A21D_01502 PF00672 HAMP domain A21D_01502 PF00512 His Kinase A (phospho-acceptor) domain A21D_01502 PF13426 PAS domain A21D_01502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01503 PF07435 YycH protein A21D_01504 PF09648 YycH protein A21D_01505 PF00753 Metallo-beta-lactamase superfamily A21D_01506 PF13180 PDZ domain A21D_01508 PF00664 ABC transporter transmembrane region A21D_01508 PF00005 ABC transporter A21D_01509 PF10417 C-terminal domain of 1-Cys peroxiredoxin A21D_01509 PF00578 AhpC/TSA family A21D_01510 PF00753 Metallo-beta-lactamase superfamily A21D_01511 PF00440 Bacterial regulatory proteins, tetR family A21D_01511 PF17934 Tetracyclin repressor-like, C-terminal domain A21D_01512 PF00893 Small Multidrug Resistance protein A21D_01513 PF00893 Small Multidrug Resistance protein A21D_01514 PF01507 Phosphoadenosine phosphosulfate reductase family A21D_01515 PF00175 Oxidoreductase NAD-binding domain A21D_01515 PF00667 FAD binding domain A21D_01515 PF00258 Flavodoxin A21D_01516 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A21D_01516 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A21D_01517 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A21D_01518 PF01903 CbiX A21D_01519 PF14824 Sirohaem biosynthesis protein central A21D_01520 PF02602 Uroporphyrinogen-III synthase HemD A21D_01521 PF14306 PUA-like domain A21D_01521 PF01747 ATP-sulfurylase A21D_01522 PF02080 TrkA-C domain A21D_01522 PF03600 Citrate transporter A21D_01524 PF00300 Histidine phosphatase superfamily (branch 1) A21D_01526 PF04650 YSIRK type signal peptide A21D_01526 PF17961 Bacterial Ig domain A21D_01526 PF00746 LPXTG cell wall anchor motif A21D_01526 PF17210 SdrD B-like domain A21D_01528 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A21D_01530 PF02463 RecF/RecN/SMC N terminal domain A21D_01533 PF04204 Homoserine O-succinyltransferase A21D_01534 PF01066 CDP-alcohol phosphatidyltransferase A21D_01535 PF02666 Phosphatidylserine decarboxylase A21D_01536 PF09335 SNARE associated Golgi protein A21D_01537 PF00478 IMP dehydrogenase / GMP reductase domain A21D_01538 PF18801 response regulator aspartate phosphatase H, N terminal A21D_01544 PF02590 Predicted SPOUT methyltransferase A21D_01555 PF07486 Cell Wall Hydrolase A21D_01560 PF00293 NUDIX domain A21D_01562 PF01938 TRAM domain A21D_01562 PF05958 tRNA (Uracil-5-)-methyltransferase A21D_01567 PF07670 Nucleoside recognition A21D_01567 PF17910 FeoB cytosolic helical domain A21D_01567 PF02421 Ferrous iron transport protein B A21D_01567 PF07664 Ferrous iron transport protein B C terminus A21D_01569 PF13361 UvrD-like helicase C-terminal domain A21D_01569 PF00580 UvrD/REP helicase N-terminal domain A21D_01569 PF12705 PD-(D/E)XK nuclease superfamily A21D_01573 PF00171 Aldehyde dehydrogenase family A21D_01575 PF01872 RibD C-terminal domain A21D_01578 PF07859 alpha/beta hydrolase fold A21D_01580 PF00072 Response regulator receiver domain A21D_01580 PF00486 Transcriptional regulatory protein, C terminal A21D_01581 PF00672 HAMP domain A21D_01581 PF00512 His Kinase A (phospho-acceptor) domain A21D_01586 PF03412 Peptidase C39 family A21D_01586 PF00664 ABC transporter transmembrane region A21D_01586 PF00005 ABC transporter A21D_01588 PF00005 ABC transporter A21D_01594 PF04397 LytTr DNA-binding domain A21D_01594 PF00072 Response regulator receiver domain A21D_01596 PF01177 Asp/Glu/Hydantoin racemase A21D_01605 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain A21D_01605 PF01522 Polysaccharide deacetylase A21D_01606 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01606 PF08279 HTH domain A21D_01606 PF00874 PRD domain A21D_01606 PF05043 Mga helix-turn-helix domain A21D_01607 PF01116 Fructose-bisphosphate aldolase class-II A21D_01608 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01608 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01609 PF02915 Rubrerythrin A21D_01610 PF00274 Fructose-bisphosphate aldolase class-I A21D_01611 PF01557 Fumarylacetoacetate (FAA) hydrolase family A21D_01612 PF00005 ABC transporter A21D_01614 PF13545 Crp-like helix-turn-helix domain A21D_01614 PF00027 Cyclic nucleotide-binding domain A21D_01615 PF05746 DALR anticodon binding domain A21D_01615 PF00750 tRNA synthetases class I (R) A21D_01615 PF03485 Arginyl tRNA synthetase N terminal domain A21D_01617 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A21D_01617 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A21D_01618 PF13520 Amino acid permease A21D_01619 PF00696 Amino acid kinase family A21D_01620 PF02863 Arginine repressor, C-terminal domain A21D_01620 PF01316 Arginine repressor, DNA binding domain A21D_01621 PF00672 HAMP domain A21D_01621 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_01621 PF02743 Cache domain A21D_01623 PF07690 Major Facilitator Superfamily A21D_01624 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A21D_01626 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01627 PF00005 ABC transporter A21D_01627 PF00571 CBS domain A21D_01628 PF12802 MarR family A21D_01630 PF02378 Phosphotransferase system, EIIC A21D_01631 PF08279 HTH domain A21D_01631 PF05043 Mga helix-turn-helix domain A21D_01631 PF00874 PRD domain A21D_01631 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01632 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01633 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_01635 PF03313 Serine dehydratase alpha chain A21D_01636 PF01842 ACT domain A21D_01636 PF03315 Serine dehydratase beta chain A21D_01638 PF01842 ACT domain A21D_01638 PF03315 Serine dehydratase beta chain A21D_01639 PF03313 Serine dehydratase alpha chain A21D_01641 PF02056 Family 4 glycosyl hydrolase A21D_01641 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_01642 PF07690 Major Facilitator Superfamily A21D_01643 PF07875 Coat F domain A21D_01645 PF00324 Amino acid permease A21D_01646 PF08892 YqcI/YcgG family A21D_01647 PF01810 LysE type translocator A21D_01649 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_01650 PF13419 Haloacid dehalogenase-like hydrolase A21D_01651 PF01226 Formate/nitrite transporter A21D_01652 PF03703 Bacterial PH domain A21D_01657 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_01657 PF03466 LysR substrate binding domain A21D_01658 PF03601 Conserved hypothetical protein 698 A21D_01659 PF12464 Maltose acetyltransferase A21D_01659 PF14602 Hexapeptide repeat of succinyl-transferase A21D_01661 PF00392 Bacterial regulatory proteins, gntR family A21D_01661 PF07702 UTRA domain A21D_01662 PF01238 Phosphomannose isomerase type I A21D_01663 PF03610 PTS system fructose IIA component A21D_01663 PF03830 PTS system sorbose subfamily IIB component A21D_01664 PF03830 PTS system sorbose subfamily IIB component A21D_01666 PF03613 PTS system mannose/fructose/sorbose family IID component A21D_01668 PF00939 Sodium:sulfate symporter transmembrane region A21D_01669 PF00072 Response regulator receiver domain A21D_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01670 PF00989 PAS fold A21D_01670 PF17203 Single cache domain 3 A21D_01670 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A21D_01674 PF05861 Bacterial phosphonate metabolism protein (PhnI) A21D_01675 PF06007 Phosphonate metabolism protein PhnJ A21D_01676 PF00005 ABC transporter A21D_01677 PF07969 Amidohydrolase family A21D_01678 PF00005 ABC transporter A21D_01679 PF02811 PHP domain A21D_01681 PF00005 ABC transporter A21D_01682 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01683 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01684 PF01609 Transposase DDE domain A21D_01685 PF06798 PrkA serine protein kinase C-terminal domain A21D_01685 PF08298 PrkA AAA domain A21D_01686 PF04285 Protein of unknown function (DUF444) A21D_01688 PF00950 ABC 3 transport family A21D_01689 PF00950 ABC 3 transport family A21D_01690 PF00005 ABC transporter A21D_01691 PF01297 Zinc-uptake complex component A periplasmic A21D_01692 PF04293 SpoVR like protein A21D_01693 PF14005 YpjP-like protein A21D_01694 PF02146 Sir2 family A21D_01696 PF01609 Transposase DDE domain A21D_01697 PF03471 Transporter associated domain A21D_01697 PF00571 CBS domain A21D_01697 PF01595 Cyclin M transmembrane N-terminal domain A21D_01698 PF02583 Metal-sensitive transcriptional repressor A21D_01699 PF01022 Bacterial regulatory protein, arsR family A21D_01700 PF02040 Arsenical pump membrane protein A21D_01701 PF01451 Low molecular weight phosphotyrosine protein phosphatase A21D_01702 PF14827 Double sensory domain of two-component sensor kinase A21D_01702 PF00672 HAMP domain A21D_01702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01702 PF13426 PAS domain A21D_01702 PF00512 His Kinase A (phospho-acceptor) domain A21D_01703 PF00486 Transcriptional regulatory protein, C terminal A21D_01703 PF00072 Response regulator receiver domain A21D_01704 PF00578 AhpC/TSA family A21D_01705 PF02683 Cytochrome C biogenesis protein transmembrane region A21D_01708 PF03466 LysR substrate binding domain A21D_01708 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_01709 PF03061 Thioesterase superfamily A21D_01714 PF13580 SIS domain A21D_01717 PF00874 PRD domain A21D_01717 PF03123 CAT RNA binding domain A21D_01718 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A21D_01719 PF12679 ABC-2 family transporter protein A21D_01720 PF00005 ABC transporter A21D_01722 PF12679 ABC-2 family transporter protein A21D_01723 PF00005 ABC transporter A21D_01727 PF00356 Bacterial regulatory proteins, lacI family A21D_01728 PF00356 Bacterial regulatory proteins, lacI family A21D_01729 PF01380 SIS domain A21D_01730 PF01081 KDPG and KHG aldolase A21D_01731 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A21D_01732 PF00294 pfkB family carbohydrate kinase A21D_01734 PF16242 Pyridoxamine 5'-phosphate oxidase like A21D_01735 PF00005 ABC transporter A21D_01736 PF02687 FtsX-like permease family A21D_01738 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A21D_01739 PF01418 Helix-turn-helix domain, rpiR family A21D_01739 PF01380 SIS domain A21D_01740 PF00294 pfkB family carbohydrate kinase A21D_01741 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01741 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01742 PF02378 Phosphotransferase system, EIIC A21D_01742 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01742 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01743 PF01116 Fructose-bisphosphate aldolase class-II A21D_01746 PF03471 Transporter associated domain A21D_01746 PF02080 TrkA-C domain A21D_01746 PF00999 Sodium/hydrogen exchanger family A21D_01748 PF13823 Alcohol dehydrogenase GroES-associated A21D_01748 PF08240 Alcohol dehydrogenase GroES-like domain A21D_01748 PF00107 Zinc-binding dehydrogenase A21D_01749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_01749 PF17200 Single Cache domain 2 A21D_01749 PF00672 HAMP domain A21D_01750 PF00005 ABC transporter A21D_01751 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01752 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01753 PF12849 PBP superfamily domain A21D_01755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A21D_01755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A21D_01755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A21D_01756 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A21D_01757 PF01370 NAD dependent epimerase/dehydratase family A21D_01758 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A21D_01761 PF02585 GlcNAc-PI de-N-acetylase A21D_01764 PF07556 Protein of unknown function (DUF1538) A21D_01765 PF07556 Protein of unknown function (DUF1538) A21D_01766 PF00764 Arginosuccinate synthase A21D_01767 PF03788 LrgA family A21D_01768 PF04172 LrgB-like family A21D_01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01772 PF00072 Response regulator receiver domain A21D_01772 PF04397 LytTr DNA-binding domain A21D_01773 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A21D_01773 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A21D_01774 PF00475 Imidazoleglycerol-phosphate dehydratase A21D_01774 PF08645 Polynucleotide kinase 3 phosphatase A21D_01775 PF01435 Peptidase family M48 A21D_01776 PF03358 NADPH-dependent FMN reductase A21D_01779 PF00296 Luciferase-like monooxygenase A21D_01780 PF01493 GXGXG motif A21D_01780 PF01645 Conserved region in glutamate synthase A21D_01780 PF00310 Glutamine amidotransferases class-II A21D_01780 PF04898 Glutamate synthase central domain A21D_01781 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A21D_01781 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01782 PF04055 Radical SAM superfamily A21D_01787 PF02634 FdhD/NarQ family A21D_01788 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A21D_01788 PF00384 Molybdopterin oxidoreductase A21D_01788 PF01568 Molydopterin dinucleotide binding domain A21D_01788 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A21D_01788 PF12838 4Fe-4S dicluster domain A21D_01789 PF04239 Protein of unknown function (DUF421) A21D_01790 PF02867 Ribonucleotide reductase, barrel domain A21D_01790 PF03477 ATP cone domain A21D_01790 PF00317 Ribonucleotide reductase, all-alpha domain A21D_01792 PF00268 Ribonucleotide reductase, small chain A21D_01795 PF00005 ABC transporter A21D_01798 PF13649 Methyltransferase domain A21D_01799 PF08239 Bacterial SH3 domain A21D_01799 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_01800 PF03358 NADPH-dependent FMN reductase A21D_01804 PF00005 ABC transporter A21D_01804 PF13732 Domain of unknown function (DUF4162) A21D_01805 PF00005 ABC transporter A21D_01806 PF07702 UTRA domain A21D_01806 PF00392 Bacterial regulatory proteins, gntR family A21D_01810 PF08000 Bacterial PH domain A21D_01811 PF00080 Copper/zinc superoxide dismutase (SODC) A21D_01812 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A21D_01812 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A21D_01813 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A21D_01813 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A21D_01814 PF01418 Helix-turn-helix domain, rpiR family A21D_01814 PF01380 SIS domain A21D_01816 PF02378 Phosphotransferase system, EIIC A21D_01816 PF00367 phosphotransferase system, EIIB A21D_01817 PF02056 Family 4 glycosyl hydrolase A21D_01817 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_01818 PF07690 Major Facilitator Superfamily A21D_01820 PF00005 ABC transporter A21D_01821 PF00271 Helicase conserved C-terminal domain A21D_01821 PF00176 SNF2 family N-terminal domain A21D_01821 PF12419 SNF2 Helicase protein A21D_01823 PF01609 Transposase DDE domain A21D_01824 PF03060 Nitronate monooxygenase A21D_01825 PF16868 NMT1-like family A21D_01829 PF04030 D-arabinono-1,4-lactone oxidase A21D_01829 PF01565 FAD binding domain A21D_01831 PF00877 NlpC/P60 family A21D_01832 PF01042 Endoribonuclease L-PSP A21D_01834 PF01554 MatE A21D_01835 PF07690 Major Facilitator Superfamily A21D_01837 PF06725 3D domain A21D_01837 PF01476 LysM domain A21D_01838 PF00005 ABC transporter A21D_01840 PF07730 Histidine kinase A21D_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_01841 PF00196 Bacterial regulatory proteins, luxR family A21D_01841 PF00072 Response regulator receiver domain A21D_01843 PF00155 Aminotransferase class I and II A21D_01844 PF01370 NAD dependent epimerase/dehydratase family A21D_01845 PF00005 ABC transporter A21D_01845 PF12848 ABC transporter A21D_01848 PF13472 GDSL-like Lipase/Acylhydrolase family A21D_01849 PF01053 Cys/Met metabolism PLP-dependent enzyme A21D_01850 PF00892 EamA-like transporter family A21D_01851 PF13396 Phospholipase_D-nuclease N-terminal A21D_01851 PF13091 PLD-like domain A21D_01852 PF03061 Thioesterase superfamily A21D_01853 PF01235 Sodium:alanine symporter family A21D_01854 PF01638 HxlR-like helix-turn-helix A21D_01855 PF02073 Thermophilic metalloprotease (M29) A21D_01856 PF02073 Thermophilic metalloprotease (M29) A21D_01857 PF00270 DEAD/DEAH box helicase A21D_01857 PF00570 HRDC domain A21D_01857 PF00271 Helicase conserved C-terminal domain A21D_01857 PF09382 RQC domain A21D_01857 PF16124 RecQ zinc-binding A21D_01859 PF05525 Branched-chain amino acid transport protein A21D_01863 PF01594 AI-2E family transporter A21D_01864 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A21D_01864 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A21D_01864 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A21D_01864 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A21D_01865 PF03741 Integral membrane protein TerC family A21D_01869 PF00375 Sodium:dicarboxylate symporter family A21D_01870 PF07885 Ion channel A21D_01870 PF02254 TrkA-N domain A21D_01871 PF01068 ATP dependent DNA ligase domain A21D_01872 PF02735 Ku70/Ku80 beta-barrel domain A21D_01874 PF01272 Transcription elongation factor, GreA/GreB, C-term A21D_01874 PF03449 Transcription elongation factor, N-terminal A21D_01875 PF17369 Family of unknown function (DUF5391) A21D_01876 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_01876 PF03466 LysR substrate binding domain A21D_01878 PF02803 Thiolase, C-terminal domain A21D_01878 PF00108 Thiolase, N-terminal domain A21D_01879 PF01144 Coenzyme A transferase A21D_01881 PF00561 alpha/beta hydrolase fold A21D_01882 PF04542 Sigma-70 region 2 A21D_01882 PF08281 Sigma-70, region 4 A21D_01884 PF06463 Molybdenum Cofactor Synthesis C A21D_01884 PF04055 Radical SAM superfamily A21D_01885 PF02597 ThiS family A21D_01886 PF12804 MobA-like NTP transferase domain A21D_01887 PF00994 Probable molybdopterin binding domain A21D_01889 PF00528 Binding-protein-dependent transport system inner membrane component A21D_01893 PF10941 Protein of unknown function DUF2620 A21D_01894 PF10797 Protein of unknown function A21D_01895 PF02126 Phosphotriesterase family A21D_01896 PF00155 Aminotransferase class I and II A21D_01897 PF01168 Alanine racemase, N-terminal domain A21D_01898 PF01676 Metalloenzyme superfamily A21D_01899 PF01967 MoaC family A21D_01904 PF13411 MerR HTH family regulatory protein A21D_01904 PF07739 TipAS antibiotic-recognition domain A21D_01906 PF07883 Cupin domain A21D_01907 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_01907 PF13192 Thioredoxin domain A21D_01908 PF00578 AhpC/TSA family A21D_01909 PF01235 Sodium:alanine symporter family A21D_01910 PF01546 Peptidase family M20/M25/M40 A21D_01911 PF00465 Iron-containing alcohol dehydrogenase A21D_01912 PF00232 Glycosyl hydrolase family 1 A21D_01913 PF00480 ROK family A21D_01914 PF01418 Helix-turn-helix domain, rpiR family A21D_01914 PF01380 SIS domain A21D_01915 PF09261 Alpha mannosidase middle domain A21D_01915 PF01074 Glycosyl hydrolases family 38 N-terminal domain A21D_01915 PF07748 Glycosyl hydrolases family 38 C-terminal domain A21D_01916 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01916 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01916 PF02378 Phosphotransferase system, EIIC A21D_01917 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_01917 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01917 PF02378 Phosphotransferase system, EIIC A21D_01918 PF01569 PAP2 superfamily A21D_01920 PF01098 Cell cycle protein A21D_01921 PF01098 Cell cycle protein A21D_01923 PF00583 Acetyltransferase (GNAT) family A21D_01924 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A21D_01925 PF01116 Fructose-bisphosphate aldolase class-II A21D_01928 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_01929 PF03611 PTS system sugar-specific permease component A21D_01933 PF13193 AMP-binding enzyme C-terminal domain A21D_01933 PF00501 AMP-binding enzyme A21D_01939 PF01609 Transposase DDE domain A21D_01945 PF01040 UbiA prenyltransferase family A21D_01947 PF03471 Transporter associated domain A21D_01947 PF01595 Cyclin M transmembrane N-terminal domain A21D_01947 PF00571 CBS domain A21D_01948 PF00690 Cation transporter/ATPase, N-terminus A21D_01948 PF00689 Cation transporting ATPase, C-terminus A21D_01949 PF00753 Metallo-beta-lactamase superfamily A21D_01949 PF16123 Hydroxyacylglutathione hydrolase C-terminus A21D_01950 PF08241 Methyltransferase domain A21D_01951 PF03477 ATP cone domain A21D_01951 PF13597 Anaerobic ribonucleoside-triphosphate reductase A21D_01952 PF04055 Radical SAM superfamily A21D_01955 PF01904 Protein of unknown function DUF72 A21D_01957 PF00128 Alpha amylase, catalytic domain A21D_01957 PF16657 Maltogenic Amylase, C-terminal domain A21D_01958 PF00356 Bacterial regulatory proteins, lacI family A21D_01961 PF03129 Anticodon binding domain A21D_01961 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A21D_01961 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A21D_01961 PF02824 TGS domain A21D_01963 PF03994 Domain of Unknown Function (DUF350) A21D_01965 PF04012 PspA/IM30 family A21D_01969 PF02361 Cobalt transport protein A21D_01970 PF00005 ABC transporter A21D_01971 PF09819 ABC-type cobalt transport system, permease component A21D_01972 PF07615 YKOF-related Family A21D_01973 PF01266 FAD dependent oxidoreductase A21D_01974 PF08279 HTH domain A21D_01974 PF00072 Response regulator receiver domain A21D_01975 PF16868 NMT1-like family A21D_01979 PF02096 60Kd inner membrane protein A21D_01982 PF00202 Aminotransferase class-III A21D_01984 PF00324 Amino acid permease A21D_01985 PF00392 Bacterial regulatory proteins, gntR family A21D_01985 PF07729 FCD domain A21D_01986 PF00392 Bacterial regulatory proteins, gntR family A21D_01986 PF07729 FCD domain A21D_01988 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A21D_01988 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A21D_01990 PF00005 ABC transporter A21D_01990 PF12848 ABC transporter A21D_01992 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A21D_01992 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A21D_01993 PF00115 Cytochrome C and Quinol oxidase polypeptide I A21D_01994 PF00510 Cytochrome c oxidase subunit III A21D_01997 PF18801 response regulator aspartate phosphatase H, N terminal A21D_02001 PF12679 ABC-2 family transporter protein A21D_02002 PF00005 ABC transporter A21D_02005 PF09587 Bacterial capsule synthesis protein PGA_cap A21D_02007 PF00085 Thioredoxin A21D_02009 PF13302 Acetyltransferase (GNAT) domain A21D_02010 PF00486 Transcriptional regulatory protein, C terminal A21D_02010 PF00072 Response regulator receiver domain A21D_02011 PF00512 His Kinase A (phospho-acceptor) domain A21D_02011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02011 PF00672 HAMP domain A21D_02015 PF02872 5'-nucleotidase, C-terminal domain A21D_02015 PF00149 Calcineurin-like phosphoesterase A21D_02016 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02017 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02018 PF00005 ABC transporter A21D_02020 PF00781 Diacylglycerol kinase catalytic domain A21D_02021 PF00005 ABC transporter A21D_02023 PF01047 MarR family A21D_02026 PF12146 Serine aminopeptidase, S33 A21D_02027 PF02645 Uncharacterised protein, DegV family COG1307 A21D_02028 PF00892 EamA-like transporter family A21D_02029 PF00271 Helicase conserved C-terminal domain A21D_02029 PF00270 DEAD/DEAH box helicase A21D_02030 PF03703 Bacterial PH domain A21D_02031 PF03703 Bacterial PH domain A21D_02033 PF01694 Rhomboid family A21D_02034 PF01648 4'-phosphopantetheinyl transferase superfamily A21D_02035 PF01256 Carbohydrate kinase A21D_02035 PF03853 YjeF-related protein N-terminus A21D_02036 PF03853 YjeF-related protein N-terminus A21D_02036 PF01256 Carbohydrate kinase A21D_02038 PF01168 Alanine racemase, N-terminal domain A21D_02038 PF00842 Alanine racemase, C-terminal domain A21D_02040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system A21D_02041 PF01740 STAS domain A21D_02041 PF08678 Rsbr N terminal A21D_02042 PF01740 STAS domain A21D_02043 PF13581 Histidine kinase-like ATPase domain A21D_02044 PF07228 Stage II sporulation protein E (SpoIIE) A21D_02044 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain A21D_02045 PF01740 STAS domain A21D_02046 PF13581 Histidine kinase-like ATPase domain A21D_02047 PF04545 Sigma-70, region 4 A21D_02047 PF04539 Sigma-70 region 3 A21D_02047 PF04542 Sigma-70 region 2 A21D_02048 PF07228 Stage II sporulation protein E (SpoIIE) A21D_02049 PF17674 HHH domain A21D_02049 PF00575 S1 RNA binding domain A21D_02049 PF09371 Tex-like protein N-terminal domain A21D_02049 PF16921 Tex protein YqgF-like domain A21D_02050 PF06628 Catalase-related immune-responsive A21D_02050 PF00199 Catalase A21D_02051 PF10263 SprT-like family A21D_02069 PF02769 AIR synthase related protein, C-terminal domain A21D_02069 PF00586 AIR synthase related protein, N-terminal domain A21D_02070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A21D_02071 PF00814 Glycoprotease family A21D_02072 PF00583 Acetyltransferase (GNAT) family A21D_02073 PF00814 Glycoprotease family A21D_02074 PF01098 Cell cycle protein A21D_02075 PF00005 ABC transporter A21D_02075 PF12848 ABC transporter A21D_02075 PF16326 ABC transporter C-terminal domain A21D_02076 PF06971 Putative DNA-binding protein N-terminus A21D_02076 PF02629 CoA binding domain A21D_02078 PF02517 CPBP intramembrane metalloprotease A21D_02079 PF00166 Chaperonin 10 Kd subunit A21D_02080 PF00118 TCP-1/cpn60 chaperonin family A21D_02081 PF00589 Phage integrase family A21D_02081 PF14659 Phage integrase, N-terminal SAM-like domain A21D_02083 PF06114 IrrE N-terminal-like domain A21D_02095 PF09588 YqaJ-like viral recombinase domain A21D_02096 PF03837 RecT family A21D_02100 PF03838 Recombination protein U A21D_02109 PF13614 AAA domain A21D_02113 PF10668 Phage terminase small subunit A21D_02113 PF03592 Terminase small subunit A21D_02114 PF04466 Phage terminase large subunit A21D_02114 PF17288 Terminase RNAseH like domain A21D_02115 PF04860 Phage portal protein A21D_02116 PF04233 Phage Mu protein F like protein A21D_02118 PF14550 Putative phage serine protease XkdF A21D_02119 PF05065 Phage capsid family A21D_02121 PF11436 Protein of unknown function (DUF3199) A21D_02122 PF12206 Domain of unknown function (DUF3599) A21D_02123 PF04883 Bacteriophage HK97-gp10, putative tail-component A21D_02126 PF04984 Phage tail sheath protein subtilisin-like domain A21D_02126 PF17481 Phage tail sheath protein beta-sandwich domain A21D_02126 PF17482 Phage tail sheath C-terminal domain A21D_02127 PF09393 Phage tail tube protein A21D_02128 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC A21D_02130 PF01464 Transglycosylase SLT domain A21D_02130 PF01464 Transglycosylase SLT domain A21D_02131 PF01476 LysM domain A21D_02133 PF10844 Protein of unknown function (DUF2577) A21D_02134 PF10934 Protein of unknown function (DUF2634) A21D_02135 PF04865 Baseplate J-like protein A21D_02140 PF05105 Bacteriophage holin family A21D_02141 PF01510 N-acetylmuramoyl-L-alanine amidase A21D_02141 PF01476 LysM domain A21D_02141 PF01471 Putative peptidoglycan binding domain A21D_02147 PF00004 ATPase family associated with various cellular activities (AAA) A21D_02149 PF08863 YolD-like protein A21D_02152 PF00589 Phage integrase family A21D_02152 PF02899 Phage integrase, N-terminal SAM-like domain A21D_02154 PF07786 Protein of unknown function (DUF1624) A21D_02154 PF04235 Protein of unknown function (DUF418) A21D_02156 PF01235 Sodium:alanine symporter family A21D_02157 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_02161 PF01609 Transposase DDE domain A21D_02162 PF02554 Carbon starvation protein CstA A21D_02164 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_02166 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02166 PF00005 ABC transporter A21D_02167 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02167 PF00005 ABC transporter A21D_02170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_02172 PF00356 Bacterial regulatory proteins, lacI family A21D_02173 PF00294 pfkB family carbohydrate kinase A21D_02174 PF05025 RbsD / FucU transport protein family A21D_02175 PF00005 ABC transporter A21D_02176 PF02653 Branched-chain amino acid transport system / permease component A21D_02177 PF13407 Periplasmic binding protein domain A21D_02179 PF01546 Peptidase family M20/M25/M40 A21D_02180 PF03806 AbgT putative transporter family A21D_02181 PF07687 Peptidase dimerisation domain A21D_02181 PF01546 Peptidase family M20/M25/M40 A21D_02182 PF03167 Uracil DNA glycosylase superfamily A21D_02183 PF03553 Na+/H+ antiporter family A21D_02184 PF00206 Lyase A21D_02184 PF14698 Argininosuccinate lyase C-terminal A21D_02186 PF00232 Glycosyl hydrolase family 1 A21D_02187 PF02378 Phosphotransferase system, EIIC A21D_02187 PF00367 phosphotransferase system, EIIB A21D_02187 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A21D_02188 PF03123 CAT RNA binding domain A21D_02188 PF00874 PRD domain A21D_02190 PF01501 Glycosyl transferase family 8 A21D_02190 PF08437 Glycosyl transferase family 8 C-terminal A21D_02191 PF00011 Hsp20/alpha crystallin family A21D_02192 PF00072 Response regulator receiver domain A21D_02192 PF00196 Bacterial regulatory proteins, luxR family A21D_02193 PF00465 Iron-containing alcohol dehydrogenase A21D_02196 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A21D_02197 PF00563 EAL domain A21D_02197 PF10388 EAL-domain associated signalling protein domain A21D_02198 PF03641 Possible lysine decarboxylase A21D_02199 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_02199 PF00672 HAMP domain A21D_02199 PF12729 Four helix bundle sensory module for signal transduction A21D_02200 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02200 PF12911 N-terminal TM domain of oligopeptide transport permease C A21D_02201 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02202 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_02203 PF00005 ABC transporter A21D_02203 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02204 PF00005 ABC transporter A21D_02204 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02207 PF03323 Bacillus/Clostridium GerA spore germination protein A21D_02208 PF03845 Spore germination protein A21D_02210 PF01425 Amidase A21D_02211 PF03806 AbgT putative transporter family A21D_02212 PF17863 AAA lid domain A21D_02212 PF07726 ATPase family associated with various cellular activities (AAA) A21D_02213 PF01882 Protein of unknown function DUF58 A21D_02214 PF11992 Domain of unknown function (DUF3488) A21D_02214 PF13559 Domain of unknown function (DUF4129) A21D_02214 PF01841 Transglutaminase-like superfamily A21D_02215 PF02540 NAD synthase A21D_02215 PF00117 Glutamine amidotransferase class-I A21D_02215 PF00958 GMP synthase C terminal domain A21D_02217 PF01022 Bacterial regulatory protein, arsR family A21D_02218 PF01297 Zinc-uptake complex component A periplasmic A21D_02219 PF00860 Permease family A21D_02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_02222 PF01625 Peptide methionine sulfoxide reductase A21D_02223 PF03473 MOSC domain A21D_02223 PF03475 3-alpha domain A21D_02224 PF00011 Hsp20/alpha crystallin family A21D_02225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_02226 PF00731 AIR carboxylase A21D_02227 PF02222 ATP-grasp domain A21D_02227 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A21D_02228 PF00206 Lyase A21D_02228 PF10397 Adenylosuccinate lyase C-terminus A21D_02229 PF01259 SAICAR synthetase A21D_02230 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase A21D_02232 PF00586 AIR synthase related protein, N-terminal domain A21D_02232 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A21D_02232 PF02769 AIR synthase related protein, C-terminal domain A21D_02233 PF00156 Phosphoribosyl transferase domain A21D_02234 PF02769 AIR synthase related protein, C-terminal domain A21D_02234 PF00586 AIR synthase related protein, N-terminal domain A21D_02235 PF00551 Formyl transferase A21D_02236 PF02142 MGS-like domain A21D_02236 PF01808 AICARFT/IMPCHase bienzyme A21D_02237 PF02843 Phosphoribosylglycinamide synthetase, C domain A21D_02237 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A21D_02237 PF02844 Phosphoribosylglycinamide synthetase, N domain A21D_02238 PF13382 Adenine deaminase C-terminal domain A21D_02238 PF01979 Amidohydrolase family A21D_02239 PF11258 Protein of unknown function (DUF3048) N-terminal domain A21D_02239 PF17479 Protein of unknown function (DUF3048) C-terminal domain A21D_02240 PF01371 Trp repressor protein A21D_02241 PF01884 PcrB family A21D_02242 PF13361 UvrD-like helicase C-terminal domain A21D_02242 PF00580 UvrD/REP helicase N-terminal domain A21D_02243 PF12826 Helix-hairpin-helix motif A21D_02243 PF03120 NAD-dependent DNA ligase OB-fold domain A21D_02243 PF00533 BRCA1 C Terminus (BRCT) domain A21D_02243 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A21D_02243 PF01653 NAD-dependent DNA ligase adenylation domain A21D_02244 PF07537 CamS sex pheromone cAM373 precursor A21D_02245 PF18801 response regulator aspartate phosphatase H, N terminal A21D_02248 PF00474 Sodium:solute symporter family A21D_02249 PF02686 Glu-tRNAGln amidotransferase C subunit A21D_02250 PF01425 Amidase A21D_02251 PF02637 GatB domain A21D_02251 PF02934 GatB/GatE catalytic domain A21D_02252 PF00781 Diacylglycerol kinase catalytic domain A21D_02254 PF05958 tRNA (Uracil-5-)-methyltransferase A21D_02254 PF01938 TRAM domain A21D_02257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_02257 PF03466 LysR substrate binding domain A21D_02259 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_02259 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_02259 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_02260 PF00285 Citrate synthase, C-terminal domain A21D_02261 PF01925 Sulfite exporter TauE/SafE A21D_02262 PF00700 Bacterial flagellin C-terminal helical region A21D_02262 PF00669 Bacterial flagellin N-terminal helical region A21D_02263 PF01207 Dihydrouridine synthase (Dus) A21D_02265 PF11188 Protein of unknown function (DUF2975) A21D_02266 PF13443 Cro/C1-type HTH DNA-binding domain A21D_02267 PF13460 NAD(P)H-binding A21D_02268 PF13520 Amino acid permease A21D_02270 PF08543 Phosphomethylpyrimidine kinase A21D_02272 PF01371 Trp repressor protein A21D_02273 PF00579 tRNA synthetases class I (W and Y) A21D_02273 PF01479 S4 domain A21D_02275 PF03551 Transcriptional regulator PadR-like family A21D_02278 PF01609 Transposase DDE domain A21D_02279 PF01053 Cys/Met metabolism PLP-dependent enzyme A21D_02280 PF05067 Manganese containing catalase A21D_02282 PF03466 LysR substrate binding domain A21D_02282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_02283 PF01274 Malate synthase A21D_02285 PF07690 Major Facilitator Superfamily A21D_02286 PF01661 Macro domain A21D_02287 PF02447 GntP family permease A21D_02288 PF07729 FCD domain A21D_02288 PF00392 Bacterial regulatory proteins, gntR family A21D_02289 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_02289 PF03466 LysR substrate binding domain A21D_02290 PF00285 Citrate synthase, C-terminal domain A21D_02291 PF03972 MmgE/PrpD family A21D_02294 PF01609 Transposase DDE domain A21D_02295 PF03610 PTS system fructose IIA component A21D_02295 PF00158 Sigma-54 interaction domain A21D_02295 PF00874 PRD domain A21D_02298 PF02378 Phosphotransferase system, EIIC A21D_02299 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_02301 PF03551 Transcriptional regulator PadR-like family A21D_02302 PF04439 Streptomycin adenylyltransferase A21D_02303 PF17676 LD-carboxypeptidase C-terminal domain A21D_02303 PF02016 LD-carboxypeptidase N-terminal domain A21D_02304 PF12728 Helix-turn-helix domain A21D_02305 PF00171 Aldehyde dehydrogenase family A21D_02306 PF03576 Peptidase family S58 A21D_02307 PF13556 PucR C-terminal helix-turn-helix domain A21D_02307 PF17853 GGDEF-like domain A21D_02307 PF05651 Putative sugar diacid recognition A21D_02308 PF01565 FAD binding domain A21D_02308 PF02913 FAD linked oxidases, C-terminal domain A21D_02309 PF02754 Cysteine-rich domain A21D_02309 PF13183 4Fe-4S dicluster domain A21D_02310 PF02583 Metal-sensitive transcriptional repressor A21D_02311 PF00581 Rhodanese-like domain A21D_02313 PF13686 DsrE/DsrF/DrsH-like family A21D_02314 PF00581 Rhodanese-like domain A21D_02315 PF01206 Sulfurtransferase TusA A21D_02315 PF00581 Rhodanese-like domain A21D_02316 PF13686 DsrE/DsrF/DrsH-like family A21D_02317 PF01206 Sulfurtransferase TusA A21D_02318 PF00916 Sulfate permease family A21D_02318 PF01740 STAS domain A21D_02319 PF00484 Carbonic anhydrase A21D_02320 PF00581 Rhodanese-like domain A21D_02320 PF00753 Metallo-beta-lactamase superfamily A21D_02321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_02323 PF00677 Lumazine binding domain A21D_02325 PF00885 6,7-dimethyl-8-ribityllumazine synthase A21D_02327 PF00005 ABC transporter A21D_02327 PF16326 ABC transporter C-terminal domain A21D_02327 PF12848 ABC transporter A21D_02333 PF00465 Iron-containing alcohol dehydrogenase A21D_02334 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_02334 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_02335 PF00209 Sodium:neurotransmitter symporter family A21D_02336 PF03301 Tryptophan 2,3-dioxygenase A21D_02337 PF04199 Putative cyclase A21D_02338 PF00266 Aminotransferase class-V A21D_02339 PF03553 Na+/H+ antiporter family A21D_02340 PF00155 Aminotransferase class I and II A21D_02341 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_02341 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_02341 PF00205 Thiamine pyrophosphate enzyme, central domain A21D_02342 PF00171 Aldehyde dehydrogenase family A21D_02343 PF03435 Saccharopine dehydrogenase NADP binding domain A21D_02343 PF16653 Saccharopine dehydrogenase C-terminal domain A21D_02346 PF00171 Aldehyde dehydrogenase family A21D_02347 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_02347 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_02347 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_02348 PF02515 CoA-transferase family III A21D_02350 PF00188 Cysteine-rich secretory protein family A21D_02352 PF04960 Glutaminase A21D_02353 PF01451 Low molecular weight phosphotyrosine protein phosphatase A21D_02355 PF03631 Virulence factor BrkB A21D_02357 PF00497 Bacterial extracellular solute-binding proteins, family 3 A21D_02358 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02361 PF07690 Major Facilitator Superfamily A21D_02363 PF14167 YfkD-like protein A21D_02364 PF13726 Na+-H+ antiporter family A21D_02364 PF03553 Na+/H+ antiporter family A21D_02365 PF01522 Polysaccharide deacetylase A21D_02366 PF13193 AMP-binding enzyme C-terminal domain A21D_02366 PF00501 AMP-binding enzyme A21D_02367 PF07724 AAA domain (Cdc48 subfamily) A21D_02367 PF10431 C-terminal, D2-small domain, of ClpB protein A21D_02367 PF17871 AAA lid domain A21D_02367 PF00004 ATPase family associated with various cellular activities (AAA) A21D_02371 PF00392 Bacterial regulatory proteins, gntR family A21D_02372 PF00005 ABC transporter A21D_02374 PF12679 ABC-2 family transporter protein A21D_02375 PF13732 Domain of unknown function (DUF4162) A21D_02375 PF00005 ABC transporter A21D_02376 PF13396 Phospholipase_D-nuclease N-terminal A21D_02376 PF13091 PLD-like domain A21D_02378 PF00392 Bacterial regulatory proteins, gntR family A21D_02379 PF01381 Helix-turn-helix A21D_02381 PF01370 NAD dependent epimerase/dehydratase family A21D_02381 PF08338 Domain of unknown function (DUF1731) A21D_02382 PF02631 RecX family A21D_02383 PF08838 Protein of unknown function (DUF1811) A21D_02384 PF04307 LexA-binding, inner membrane-associated putative hydrolase A21D_02385 PF00730 HhH-GPD superfamily base excision DNA repair protein A21D_02385 PF14815 NUDIX domain A21D_02388 PF04167 Protein of unknown function (DUF402) A21D_02389 PF00664 ABC transporter transmembrane region A21D_02389 PF00005 ABC transporter A21D_02391 PF00202 Aminotransferase class-III A21D_02392 PF02687 FtsX-like permease family A21D_02393 PF00005 ABC transporter A21D_02394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02395 PF00072 Response regulator receiver domain A21D_02395 PF00486 Transcriptional regulatory protein, C terminal A21D_02396 PF07885 Ion channel A21D_02397 PF00578 AhpC/TSA family A21D_02398 PF01923 Cobalamin adenosyltransferase A21D_02399 PF01475 Ferric uptake regulator family A21D_02400 PF11023 Zinc-ribbon containing domain A21D_02401 PF18576 Helix-turn-helix domain A21D_02401 PF14540 Nucleotidyltransferase-like A21D_02420 PF01797 Transposase IS200 like A21D_02421 PF13276 HTH-like domain A21D_02421 PF13333 Integrase core domain A21D_02421 PF00665 Integrase core domain A21D_02422 PF01527 Transposase A21D_02423 PF02660 Glycerol-3-phosphate acyltransferase A21D_02424 PF07969 Amidohydrolase family A21D_02425 PF00474 Sodium:solute symporter family A21D_02426 PF07690 Major Facilitator Superfamily A21D_02427 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_02427 PF12793 Sugar transport-related sRNA regulator N-term A21D_02428 PF01648 4'-phosphopantetheinyl transferase superfamily A21D_02429 PF00975 Thioesterase domain A21D_02429 PF00550 Phosphopantetheine attachment site A21D_02429 PF00501 AMP-binding enzyme A21D_02429 PF00668 Condensation domain A21D_02429 PF13193 AMP-binding enzyme C-terminal domain A21D_02430 PF16197 Ketoacyl-synthetase C-terminal extension A21D_02430 PF00501 AMP-binding enzyme A21D_02430 PF00202 Aminotransferase class-III A21D_02430 PF00550 Phosphopantetheine attachment site A21D_02430 PF02801 Beta-ketoacyl synthase, C-terminal domain A21D_02430 PF00109 Beta-ketoacyl synthase, N-terminal domain A21D_02430 PF13193 AMP-binding enzyme C-terminal domain A21D_02430 PF00668 Condensation domain A21D_02431 PF00698 Acyl transferase domain A21D_02432 PF00550 Phosphopantetheine attachment site A21D_02432 PF00501 AMP-binding enzyme A21D_02432 PF13193 AMP-binding enzyme C-terminal domain A21D_02432 PF00668 Condensation domain A21D_02433 PF13193 AMP-binding enzyme C-terminal domain A21D_02433 PF00550 Phosphopantetheine attachment site A21D_02433 PF00668 Condensation domain A21D_02433 PF00501 AMP-binding enzyme A21D_02435 PF12544 Lysine-2,3-aminomutase A21D_02437 PF01039 Carboxyl transferase domain A21D_02442 PF00149 Calcineurin-like phosphoesterase A21D_02444 PF02567 Phenazine biosynthesis-like protein A21D_02446 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A21D_02447 PF07969 Amidohydrolase family A21D_02448 PF03611 PTS system sugar-specific permease component A21D_02449 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_02450 PF02630 SCO1/SenC A21D_02451 PF13419 Haloacid dehalogenase-like hydrolase A21D_02454 PF02581 Thiamine monophosphate synthase A21D_02455 PF01266 FAD dependent oxidoreductase A21D_02456 PF02597 ThiS family A21D_02456 PF05690 Thiazole biosynthesis protein ThiG A21D_02457 PF05690 Thiazole biosynthesis protein ThiG A21D_02458 PF00899 ThiF family A21D_02460 PF07670 Nucleoside recognition A21D_02460 PF17910 FeoB cytosolic helical domain A21D_02460 PF07664 Ferrous iron transport protein B C terminus A21D_02460 PF02421 Ferrous iron transport protein B A21D_02461 PF17910 FeoB cytosolic helical domain A21D_02461 PF02421 Ferrous iron transport protein B A21D_02461 PF07670 Nucleoside recognition A21D_02461 PF07664 Ferrous iron transport protein B C terminus A21D_02462 PF04023 FeoA domain A21D_02462 PF07664 Ferrous iron transport protein B C terminus A21D_02462 PF17910 FeoB cytosolic helical domain A21D_02462 PF07670 Nucleoside recognition A21D_02462 PF02421 Ferrous iron transport protein B A21D_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02465 PF00512 His Kinase A (phospho-acceptor) domain A21D_02465 PF16736 Single Cache-like A21D_02465 PF00989 PAS fold A21D_02466 PF00072 Response regulator receiver domain A21D_02466 PF00486 Transcriptional regulatory protein, C terminal A21D_02469 PF06146 Phosphate-starvation-inducible E A21D_02470 PF00392 Bacterial regulatory proteins, gntR family A21D_02470 PF07702 UTRA domain A21D_02471 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A21D_02471 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A21D_02472 PF00202 Aminotransferase class-III A21D_02473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_02473 PF03466 LysR substrate binding domain A21D_02474 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_02474 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_02474 PF00205 Thiamine pyrophosphate enzyme, central domain A21D_02475 PF04203 Sortase domain A21D_02476 PF00155 Aminotransferase class I and II A21D_02477 PF00440 Bacterial regulatory proteins, tetR family A21D_02477 PF17932 Tetracyclin repressor-like, C-terminal domain A21D_02478 PF00106 short chain dehydrogenase A21D_02480 PF02803 Thiolase, C-terminal domain A21D_02480 PF00108 Thiolase, N-terminal domain A21D_02481 PF02515 CoA-transferase family III A21D_02482 PF00501 AMP-binding enzyme A21D_02482 PF13193 AMP-binding enzyme C-terminal domain A21D_02483 PF13193 AMP-binding enzyme C-terminal domain A21D_02483 PF00501 AMP-binding enzyme A21D_02487 PF07687 Peptidase dimerisation domain A21D_02487 PF01546 Peptidase family M20/M25/M40 A21D_02488 PF00860 Permease family A21D_02489 PF01979 Amidohydrolase family A21D_02492 PF00107 Zinc-binding dehydrogenase A21D_02492 PF08240 Alcohol dehydrogenase GroES-like domain A21D_02493 PF00701 Dihydrodipicolinate synthetase family A21D_02495 PF10282 Lactonase, 7-bladed beta-propeller A21D_02496 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_02496 PF00205 Thiamine pyrophosphate enzyme, central domain A21D_02496 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_02499 PF02743 Cache domain A21D_02499 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A21D_02499 PF00672 HAMP domain A21D_02500 PF01609 Transposase DDE domain A21D_02501 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02502 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02503 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_02504 PF03611 PTS system sugar-specific permease component A21D_02505 PF02126 Phosphotriesterase family A21D_02507 PF13580 SIS domain A21D_02508 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_02508 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A21D_02510 PF12706 Beta-lactamase superfamily domain A21D_02511 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A21D_02512 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02514 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02514 PF00005 ABC transporter A21D_02515 PF00005 ABC transporter A21D_02515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A21D_02516 PF07690 Major Facilitator Superfamily A21D_02517 PF00149 Calcineurin-like phosphoesterase A21D_02518 PF06826 Predicted Permease Membrane Region A21D_02518 PF02080 TrkA-C domain A21D_02519 PF07687 Peptidase dimerisation domain A21D_02519 PF01546 Peptidase family M20/M25/M40 A21D_02520 PF03606 C4-dicarboxylate anaerobic carrier A21D_02522 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A21D_02522 PF13378 Enolase C-terminal domain-like A21D_02523 PF06826 Predicted Permease Membrane Region A21D_02523 PF02080 TrkA-C domain A21D_02524 PF02898 Nitric oxide synthase, oxygenase domain A21D_02525 PF03123 CAT RNA binding domain A21D_02525 PF00874 PRD domain A21D_02526 PF00367 phosphotransferase system, EIIB A21D_02526 PF02378 Phosphotransferase system, EIIC A21D_02526 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A21D_02527 PF11975 Family 4 glycosyl hydrolase C-terminal domain A21D_02527 PF02056 Family 4 glycosyl hydrolase A21D_02528 PF00171 Aldehyde dehydrogenase family A21D_02529 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_02530 PF02378 Phosphotransferase system, EIIC A21D_02531 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit A21D_02532 PF00232 Glycosyl hydrolase family 1 A21D_02533 PF00874 PRD domain A21D_02533 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02533 PF08279 HTH domain A21D_02533 PF05043 Mga helix-turn-helix domain A21D_02534 PF00874 PRD domain A21D_02534 PF05043 Mga helix-turn-helix domain A21D_02534 PF08279 HTH domain A21D_02534 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A21D_02535 PF02378 Phosphotransferase system, EIIC A21D_02535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02536 PF01238 Phosphomannose isomerase type I A21D_02538 PF00248 Aldo/keto reductase family A21D_02540 PF01156 Inosine-uridine preferring nucleoside hydrolase A21D_02541 PF00183 Hsp90 protein A21D_02544 PF00005 ABC transporter A21D_02545 PF01063 Amino-transferase class IV A21D_02549 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_02549 PF01842 ACT domain A21D_02549 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A21D_02550 PF00266 Aminotransferase class-V A21D_02553 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A21D_02553 PF14579 Helix-hairpin-helix motif A21D_02553 PF00929 Exonuclease A21D_02553 PF07733 Bacterial DNA polymerase III alpha NTPase domain A21D_02553 PF02811 PHP domain A21D_02557 PF02515 CoA-transferase family III A21D_02558 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_02558 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_02558 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_02559 PF17391 Urocanase N-terminal domain A21D_02559 PF17392 Urocanase C-terminal domain A21D_02559 PF01175 Urocanase Rossmann-like domain A21D_02560 PF00491 Arginase family A21D_02561 PF01979 Amidohydrolase family A21D_02562 PF09021 HutP A21D_02563 PF00221 Aromatic amino acid lyase A21D_02565 PF03060 Nitronate monooxygenase A21D_02566 PF13193 AMP-binding enzyme C-terminal domain A21D_02566 PF00501 AMP-binding enzyme A21D_02567 PF03466 LysR substrate binding domain A21D_02567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_02568 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A21D_02568 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A21D_02569 PF01546 Peptidase family M20/M25/M40 A21D_02569 PF07687 Peptidase dimerisation domain A21D_02570 PF13350 Tyrosine phosphatase family A21D_02572 PF02954 Bacterial regulatory protein, Fis family A21D_02572 PF00158 Sigma-54 interaction domain A21D_02572 PF00989 PAS fold A21D_02574 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_02574 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_02574 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_02575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A21D_02575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A21D_02576 PF00171 Aldehyde dehydrogenase family A21D_02577 PF00378 Enoyl-CoA hydratase/isomerase A21D_02578 PF00378 Enoyl-CoA hydratase/isomerase A21D_02581 PF00682 HMGL-like A21D_02583 PF02378 Phosphotransferase system, EIIC A21D_02583 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A21D_02583 PF00367 phosphotransferase system, EIIB A21D_02585 PF16657 Maltogenic Amylase, C-terminal domain A21D_02585 PF00128 Alpha amylase, catalytic domain A21D_02588 PF00171 Aldehyde dehydrogenase family A21D_02589 PF01619 Proline dehydrogenase A21D_02590 PF02423 Ornithine cyclodeaminase/mu-crystallin family A21D_02592 PF00156 Phosphoribosyl transferase domain A21D_02593 PF00860 Permease family A21D_02594 PF07690 Major Facilitator Superfamily A21D_02596 PF00107 Zinc-binding dehydrogenase A21D_02596 PF08240 Alcohol dehydrogenase GroES-like domain A21D_02599 PF07730 Histidine kinase A21D_02600 PF00072 Response regulator receiver domain A21D_02600 PF00196 Bacterial regulatory proteins, luxR family A21D_02601 PF00005 ABC transporter A21D_02605 PF01061 ABC-2 type transporter A21D_02607 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A21D_02607 PF00117 Glutamine amidotransferase class-I A21D_02608 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A21D_02608 PF02142 MGS-like domain A21D_02608 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A21D_02609 PF07676 WD40-like Beta Propeller Repeat A21D_02609 PF00326 Prolyl oligopeptidase family A21D_02610 PF01063 Amino-transferase class IV A21D_02613 PF08331 Domain of unknown function (DUF1730) A21D_02614 PF12671 Putative amidase domain A21D_02615 PF00588 SpoU rRNA Methylase family A21D_02617 PF16870 2-oxoglutarate dehydrogenase C-terminal A21D_02617 PF02779 Transketolase, pyrimidine binding domain A21D_02617 PF00676 Dehydrogenase E1 component A21D_02618 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A21D_02618 PF00364 Biotin-requiring enzyme A21D_02618 PF02817 e3 binding domain A21D_02619 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A21D_02620 PF07662 Na+ dependent nucleoside transporter C-terminus A21D_02620 PF01773 Na+ dependent nucleoside transporter N-terminus A21D_02621 PF01554 MatE A21D_02622 PF03033 Glycosyltransferase family 28 N-terminal domain A21D_02622 PF04101 Glycosyltransferase family 28 C-terminal domain A21D_02624 PF00664 ABC transporter transmembrane region A21D_02624 PF00005 ABC transporter A21D_02625 PF00664 ABC transporter transmembrane region A21D_02625 PF00005 ABC transporter A21D_02626 PF13180 PDZ domain A21D_02627 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_02630 PF04542 Sigma-70 region 2 A21D_02631 PF12791 Anti-sigma factor N-terminus A21D_02633 PF14148 YhdB-like protein A21D_02634 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) A21D_02635 PF01546 Peptidase family M20/M25/M40 A21D_02635 PF07687 Peptidase dimerisation domain A21D_02636 PF00106 short chain dehydrogenase A21D_02637 PF09680 Family of unknown function A21D_02638 PF00557 Metallopeptidase family M24 A21D_02644 PF01545 Cation efflux family A21D_02644 PF16916 Dimerisation domain of Zinc Transporter A21D_02649 PF11700 Vacuole effluxer Atg22 like A21D_02651 PF00206 Lyase A21D_02651 PF10415 Fumarase C C-terminus A21D_02652 PF00269 Small, acid-soluble spore proteins, alpha/beta type A21D_02653 PF00005 ABC transporter A21D_02653 PF17912 MalK OB fold domain A21D_02653 PF03459 TOBE domain A21D_02654 PF13556 PucR C-terminal helix-turn-helix domain A21D_02655 PF06133 Control of competence regulator ComK, YlbF/YmcA A21D_02656 PF00378 Enoyl-CoA hydratase/isomerase A21D_02657 PF14120 YhzD-like protein A21D_02660 PF13732 Domain of unknown function (DUF4162) A21D_02660 PF00005 ABC transporter A21D_02662 PF00149 Calcineurin-like phosphoesterase A21D_02663 PF13514 AAA domain A21D_02666 PF14147 Sporulation protein YhaL A21D_02669 PF11667 Putative zincin peptidase A21D_02671 PF12802 MarR family A21D_02672 PF00571 CBS domain A21D_02672 PF00005 ABC transporter A21D_02673 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02674 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A21D_02675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A21D_02677 PF17099 Tryptophan transporter TrpP A21D_02678 PF01230 HIT domain A21D_02680 PF03606 C4-dicarboxylate anaerobic carrier A21D_02681 PF01156 Inosine-uridine preferring nucleoside hydrolase A21D_02682 PF00294 pfkB family carbohydrate kinase A21D_02683 PF00005 ABC transporter A21D_02684 PF05975 Bacterial ABC transporter protein EcsB A21D_02685 PF07687 Peptidase dimerisation domain A21D_02685 PF01546 Peptidase family M20/M25/M40 A21D_02688 PF07690 Major Facilitator Superfamily A21D_02690 PF00672 HAMP domain A21D_02690 PF07730 Histidine kinase A21D_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02691 PF00196 Bacterial regulatory proteins, luxR family A21D_02691 PF00072 Response regulator receiver domain A21D_02692 PF02600 Disulfide bond formation protein DsbB A21D_02693 PF00085 Thioredoxin A21D_02693 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_02694 PF00465 Iron-containing alcohol dehydrogenase A21D_02696 PF00905 Penicillin binding protein transpeptidase domain A21D_02696 PF00912 Transglycosylase A21D_02697 PF01208 Uroporphyrinogen decarboxylase (URO-D) A21D_02700 PF08439 Oligopeptidase F A21D_02700 PF01432 Peptidase family M3 A21D_02702 PF10437 Bacterial lipoate protein ligase C-terminus A21D_02702 PF03099 Biotin/lipoate A/B protein ligase family A21D_02703 PF13193 AMP-binding enzyme C-terminal domain A21D_02703 PF00501 AMP-binding enzyme A21D_02707 PF09335 SNARE associated Golgi protein A21D_02708 PF10502 Signal peptidase, peptidase S26 A21D_02709 PF12705 PD-(D/E)XK nuclease superfamily A21D_02710 PF00580 UvrD/REP helicase N-terminal domain A21D_02710 PF12705 PD-(D/E)XK nuclease superfamily A21D_02710 PF13361 UvrD-like helicase C-terminal domain A21D_02711 PF10676 Spore germination protein gerPA/gerPF A21D_02715 PF10737 Spore germination protein GerPC A21D_02716 PF10803 Spore germination GerPB A21D_02717 PF10676 Spore germination protein gerPA/gerPF A21D_02718 PF04235 Protein of unknown function (DUF418) A21D_02719 PF00202 Aminotransferase class-III A21D_02720 PF07457 Protein of unknown function (DUF1516) A21D_02722 PF00128 Alpha amylase, catalytic domain A21D_02723 PF02645 Uncharacterised protein, DegV family COG1307 A21D_02724 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_02724 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A21D_02730 PF00326 Prolyl oligopeptidase family A21D_02731 PF01883 Iron-sulfur cluster assembly protein A21D_02732 PF02673 Bacitracin resistance protein BacA A21D_02736 PF02608 ABC transporter substrate-binding protein PnrA-like A21D_02737 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A21D_02737 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A21D_02738 PF02801 Beta-ketoacyl synthase, C-terminal domain A21D_02738 PF00109 Beta-ketoacyl synthase, N-terminal domain A21D_02740 PF12227 Protein of unknown function (DUF3603) A21D_02741 PF00579 tRNA synthetases class I (W and Y) A21D_02742 PF00581 Rhodanese-like domain A21D_02745 PF01609 Transposase DDE domain A21D_02746 PF13508 Acetyltransferase (GNAT) domain A21D_02748 PF03960 ArsC family A21D_02749 PF05389 Negative regulator of genetic competence (MecA) A21D_02751 PF08439 Oligopeptidase F A21D_02751 PF01432 Peptidase family M3 A21D_02754 PF01152 Bacterial-like globin A21D_02755 PF01928 CYTH domain A21D_02756 PF04607 Region found in RelA / SpoT proteins A21D_02757 PF01513 ATP-NAD kinase A21D_02758 PF00849 RNA pseudouridylate synthase A21D_02759 PF00149 Calcineurin-like phosphoesterase A21D_02760 PF01769 Divalent cation transporter A21D_02760 PF03448 MgtE intracellular N domain A21D_02760 PF00571 CBS domain A21D_02766 PF04239 Protein of unknown function (DUF421) A21D_02767 PF13673 Acetyltransferase (GNAT) domain A21D_02769 PF00756 Putative esterase A21D_02770 PF00005 ABC transporter A21D_02770 PF00664 ABC transporter transmembrane region A21D_02771 PF00005 ABC transporter A21D_02771 PF00664 ABC transporter transmembrane region A21D_02773 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A21D_02773 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_02775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A21D_02775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_02776 PF00072 Response regulator receiver domain A21D_02777 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02777 PF00989 PAS fold A21D_02777 PF17203 Single cache domain 3 A21D_02777 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A21D_02778 PF00589 Phage integrase family A21D_02778 PF02899 Phage integrase, N-terminal SAM-like domain A21D_02780 PF00589 Phage integrase family A21D_02780 PF02899 Phage integrase, N-terminal SAM-like domain A21D_02781 PF18010 Cry35Ab1 HTH C-terminal domain A21D_02781 PF00239 Resolvase, N terminal domain A21D_02802 PF17941 Polyphosphate kinase C-terminal domain 1 A21D_02802 PF13090 Polyphosphate kinase C-terminal domain 2 A21D_02802 PF13089 Polyphosphate kinase N-terminal domain A21D_02802 PF02503 Polyphosphate kinase middle domain A21D_02803 PF02541 Ppx/GppA phosphatase family A21D_02804 PF00056 lactate/malate dehydrogenase, NAD binding domain A21D_02804 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A21D_02806 PF06580 Histidine kinase A21D_02806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02807 PF00072 Response regulator receiver domain A21D_02807 PF04397 LytTr DNA-binding domain A21D_02809 PF00196 Bacterial regulatory proteins, luxR family A21D_02809 PF00072 Response regulator receiver domain A21D_02815 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_02816 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_02819 PF00290 Tryptophan synthase alpha chain A21D_02820 PF00582 Universal stress protein family A21D_02821 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A21D_02822 PF01925 Sulfite exporter TauE/SafE A21D_02823 PF02872 5'-nucleotidase, C-terminal domain A21D_02824 PF09560 Sporulation protein YunB (Spo_YunB) A21D_02825 PF03553 Na+/H+ antiporter family A21D_02826 PF00209 Sodium:neurotransmitter symporter family A21D_02828 PF01551 Peptidase family M23 A21D_02829 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) A21D_02830 PF06265 Protein of unknown function (DUF1027) A21D_02833 PF01934 Protein of unknown function DUF86 A21D_02834 PF13344 Haloacid dehalogenase-like hydrolase A21D_02835 PF04608 Phosphatidylglycerophosphatase A A21D_02837 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A21D_02837 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A21D_02838 PF01106 NifU-like domain A21D_02839 PF07315 Protein of unknown function (DUF1462) A21D_02840 PF01678 Diaminopimelate epimerase A21D_02841 PF01521 Iron-sulphur cluster biosynthesis A21D_02842 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_02843 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_02845 PF06725 3D domain A21D_02846 PF02681 Divergent PAP2 family A21D_02849 PF01048 Phosphorylase superfamily A21D_02850 PF00381 PTS HPr component phosphorylation site A21D_02851 PF08810 Kinase associated protein B A21D_02853 PF00080 Copper/zinc superoxide dismutase (SODC) A21D_02854 PF00155 Aminotransferase class I and II A21D_02855 PF00342 Phosphoglucose isomerase A21D_02856 PF04070 Domain of unknown function (DUF378) A21D_02857 PF00575 S1 RNA binding domain A21D_02859 PF07885 Ion channel A21D_02859 PF02254 TrkA-N domain A21D_02862 PF05922 Peptidase inhibitor I9 A21D_02862 PF00082 Subtilase family A21D_02863 PF12822 ECF transporter, substrate-specific component A21D_02864 PF03576 Peptidase family S58 A21D_02865 PF01258 Prokaryotic dksA/traR C4-type zinc finger A21D_02866 PF03061 Thioesterase superfamily A21D_02867 PF01040 UbiA prenyltransferase family A21D_02868 PF00425 chorismate binding enzyme A21D_02869 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A21D_02869 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A21D_02869 PF16582 Middle domain of thiamine pyrophosphate A21D_02870 PF00561 alpha/beta hydrolase fold A21D_02871 PF00378 Enoyl-CoA hydratase/isomerase A21D_02872 PF00501 AMP-binding enzyme A21D_02872 PF13193 AMP-binding enzyme C-terminal domain A21D_02880 PF00293 NUDIX domain A21D_02881 PF00528 Binding-protein-dependent transport system inner membrane component A21D_02882 PF00005 ABC transporter A21D_02884 PF01293 Phosphoenolpyruvate carboxykinase A21D_02885 PF02773 S-adenosylmethionine synthetase, C-terminal domain A21D_02885 PF02772 S-adenosylmethionine synthetase, central domain A21D_02885 PF00438 S-adenosylmethionine synthetase, N-terminal domain A21D_02886 PF13537 Glutamine amidotransferase domain A21D_02886 PF00733 Asparagine synthase A21D_02887 PF13529 Peptidase_C39 like family A21D_02888 PF00132 Bacterial transferase hexapeptide (six repeats) A21D_02889 PF10776 Protein of unknown function (DUF2600) A21D_02890 PF00465 Iron-containing alcohol dehydrogenase A21D_02890 PF00171 Aldehyde dehydrogenase family A21D_02891 PF06962 Putative rRNA methylase A21D_02892 PF13603 Leucyl-tRNA synthetase, Domain 2 A21D_02892 PF08264 Anticodon-binding domain of tRNA A21D_02892 PF09334 tRNA synthetases class I (M) A21D_02892 PF00133 tRNA synthetases class I (I, L, M and V) A21D_02894 PF00581 Rhodanese-like domain A21D_02901 PF14667 Polysaccharide biosynthesis C-terminal domain A21D_02901 PF01943 Polysaccharide biosynthesis protein A21D_02902 PF00849 RNA pseudouridylate synthase A21D_02902 PF01479 S4 domain A21D_02905 PF01636 Phosphotransferase enzyme family A21D_02906 PF14165 YtzH-like protein A21D_02907 PF02390 Putative methyltransferase A21D_02908 PF00753 Metallo-beta-lactamase superfamily A21D_02910 PF05343 M42 glutamyl aminopeptidase A21D_02911 PF01931 Protein of unknown function DUF84 A21D_02912 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ A21D_02913 PF00085 Thioredoxin A21D_02914 PF07285 Protein of unknown function (DUF1444) A21D_02915 PF14794 Domain of unknown function (DUF4479) A21D_02915 PF01588 Putative tRNA binding domain A21D_02916 PF17854 FtsK alpha domain A21D_02916 PF01580 FtsK/SpoIIIE family A21D_02916 PF09397 Ftsk gamma domain A21D_02918 PF08245 Mur ligase middle domain A21D_02918 PF02875 Mur ligase family, glutamate ligase domain A21D_02918 PF01225 Mur ligase family, catalytic domain A21D_02922 PF02491 SHS2 domain inserted in FTSA A21D_02923 PF00793 DAHP synthetase I family A21D_02923 PF01817 Chorismate mutase type II A21D_02924 PF00356 Bacterial regulatory proteins, lacI family A21D_02925 PF01618 MotA/TolQ/ExbB proton channel family A21D_02926 PF00691 OmpA family A21D_02926 PF13677 Membrane MotB of proton-channel complex MotA/MotB A21D_02927 PF00850 Histone deacetylase domain A21D_02928 PF00571 CBS domain A21D_02929 PF00583 Acetyltransferase (GNAT) family A21D_02930 PF00912 Transglycosylase A21D_02930 PF00905 Penicillin binding protein transpeptidase domain A21D_02932 PF01479 S4 domain A21D_02932 PF00163 Ribosomal protein S4/S9 N-terminal domain A21D_02933 PF00990 Diguanylate cyclase, GGDEF domain A21D_02934 PF13185 GAF domain A21D_02935 PF00440 Bacterial regulatory proteins, tetR family A21D_02936 PF06160 Septation ring formation regulator, EzrA A21D_02937 PF00266 Aminotransferase class-V A21D_02938 PF02568 Thiamine biosynthesis protein (ThiI) A21D_02938 PF02926 THUMP domain A21D_02939 PF00269 Small, acid-soluble spore proteins, alpha/beta type A21D_02940 PF01513 ATP-NAD kinase A21D_02941 PF11167 Protein of unknown function (DUF2953) A21D_02942 PF09579 Sporulation protein YtfJ (Spore_YtfJ) A21D_02943 PF08534 Redoxin A21D_02944 PF02384 N-6 DNA Methylase A21D_02945 PF00871 Acetokinase family A21D_02946 PF00582 Universal stress protein family A21D_02948 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A21D_02948 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A21D_02949 PF00557 Metallopeptidase family M24 A21D_02949 PF01321 Creatinase/Prolidase N-terminal domain A21D_02950 PF12706 Beta-lactamase superfamily domain A21D_02951 PF06750 Bacterial Peptidase A24 N-terminal domain A21D_02951 PF01478 Type IV leader peptidase family A21D_02953 PF00392 Bacterial regulatory proteins, gntR family A21D_02953 PF07085 DRTGG domain A21D_02953 PF03061 Thioesterase superfamily A21D_02953 PF00571 CBS domain A21D_02955 PF01368 DHH family A21D_02955 PF02272 DHHA1 domain A21D_02959 PF14034 Sporulation protein YtrH A21D_02960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A21D_02960 PF07733 Bacterial DNA polymerase III alpha NTPase domain A21D_02960 PF01336 OB-fold nucleic acid binding domain A21D_02960 PF02811 PHP domain A21D_02960 PF14579 Helix-hairpin-helix motif A21D_02961 PF03949 Malic enzyme, NAD binding domain A21D_02961 PF00390 Malic enzyme, N-terminal domain A21D_02962 PF00392 Bacterial regulatory proteins, gntR family A21D_02963 PF01039 Carboxyl transferase domain A21D_02964 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A21D_02965 PF00365 Phosphofructokinase A21D_02966 PF02887 Pyruvate kinase, alpha/beta domain A21D_02966 PF00391 PEP-utilising enzyme, mobile domain A21D_02966 PF00224 Pyruvate kinase, barrel domain A21D_02967 PF04186 FxsA cytoplasmic membrane protein A21D_02968 PF01594 AI-2E family transporter A21D_02969 PF00285 Citrate synthase, C-terminal domain A21D_02970 PF00180 Isocitrate/isopropylmalate dehydrogenase A21D_02971 PF00056 lactate/malate dehydrogenase, NAD binding domain A21D_02971 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A21D_02973 PF00072 Response regulator receiver domain A21D_02973 PF00486 Transcriptional regulatory protein, C terminal A21D_02974 PF00512 His Kinase A (phospho-acceptor) domain A21D_02974 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_02974 PF16736 Single Cache-like A21D_02974 PF00989 PAS fold A21D_02975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A21D_02975 PF01367 5'-3' exonuclease, C-terminal SAM fold A21D_02975 PF00476 DNA polymerase family A A21D_02976 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A21D_02976 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A21D_02976 PF06827 Zinc finger found in FPG and IleRS A21D_02977 PF01121 Dephospho-CoA kinase A21D_02978 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A21D_02978 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A21D_02979 PF02675 S-adenosylmethionine decarboxylase A21D_02981 PF03477 ATP cone domain A21D_02982 PF07261 Replication initiation and membrane attachment A21D_02983 PF01695 IstB-like ATP binding protein A21D_02983 PF07319 Primosomal protein DnaI N-terminus A21D_02984 PF08812 YtxC-like family A21D_02985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A21D_02985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A21D_02985 PF03129 Anticodon binding domain A21D_02985 PF02824 TGS domain A21D_02986 PF13333 Integrase core domain A21D_02986 PF00665 Integrase core domain A21D_02987 PF05198 Translation initiation factor IF-3, N-terminal domain A21D_02987 PF00707 Translation initiation factor IF-3, C-terminal domain A21D_02988 PF01632 Ribosomal protein L35 A21D_02989 PF00453 Ribosomal protein L20 A21D_02990 PF06961 Protein of unknown function (DUF1294) A21D_02991 PF09335 SNARE associated Golgi protein A21D_02994 PF05343 M42 glutamyl aminopeptidase A21D_02995 PF01464 Transglycosylase SLT domain A21D_02996 PF00005 ABC transporter A21D_03000 PF14098 Small, acid-soluble spore protein I A21D_03001 PF00588 SpoU rRNA Methylase family A21D_03001 PF08032 RNA 2'-O ribose methyltransferase substrate binding A21D_03002 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A21D_03002 PF01409 tRNA synthetases class II core domain (F) A21D_03003 PF03483 B3/4 domain A21D_03003 PF01588 Putative tRNA binding domain A21D_03003 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A21D_03003 PF03147 Ferredoxin-fold anticodon binding domain A21D_03003 PF03484 tRNA synthetase B5 domain A21D_03004 PF01351 Ribonuclease HII A21D_03004 PF11858 Domain of unknown function (DUF3378) A21D_03005 PF05164 Cell division protein ZapA A21D_03006 PF02674 Colicin V production protein A21D_03007 PF02811 PHP domain A21D_03007 PF14716 Helix-hairpin-helix domain A21D_03007 PF14791 DNA polymerase beta thumb A21D_03008 PF00488 MutS domain V A21D_03008 PF01713 Smr domain A21D_03009 PF03994 Domain of Unknown Function (DUF350) A21D_03010 PF00501 AMP-binding enzyme A21D_03010 PF13193 AMP-binding enzyme C-terminal domain A21D_03011 PF00440 Bacterial regulatory proteins, tetR family A21D_03011 PF08359 YsiA-like protein, C-terminal region A21D_03012 PF00378 Enoyl-CoA hydratase/isomerase A21D_03013 PF01012 Electron transfer flavoprotein domain A21D_03014 PF01012 Electron transfer flavoprotein domain A21D_03014 PF00766 Electron transfer flavoprotein FAD-binding domain A21D_03015 PF00085 Thioredoxin A21D_03016 PF08459 UvrC Helix-hairpin-helix N-terminal A21D_03016 PF01541 GIY-YIG catalytic domain A21D_03016 PF02151 UvrB/uvrC motif A21D_03017 PF10702 Protein of unknown function (DUF2507) A21D_03018 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A21D_03019 PF00890 FAD binding domain A21D_03019 PF02910 Fumarate reductase flavoprotein C-term A21D_03020 PF13183 4Fe-4S dicluster domain A21D_03020 PF13085 2Fe-2S iron-sulfur cluster binding domain A21D_03021 PF03061 Thioesterase superfamily A21D_03022 PF00196 Bacterial regulatory proteins, luxR family A21D_03025 PF13847 Methyltransferase domain A21D_03027 PF01022 Bacterial regulatory protein, arsR family A21D_03031 PF00107 Zinc-binding dehydrogenase A21D_03031 PF08240 Alcohol dehydrogenase GroES-like domain A21D_03033 PF00392 Bacterial regulatory proteins, gntR family A21D_03034 PF00005 ABC transporter A21D_03039 PF01047 MarR family A21D_03042 PF13247 4Fe-4S dicluster domain A21D_03044 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A21D_03044 PF00384 Molybdopterin oxidoreductase A21D_03044 PF01568 Molydopterin dinucleotide binding domain A21D_03046 PF02416 mttA/Hcf106 family A21D_03047 PF00027 Cyclic nucleotide-binding domain A21D_03047 PF00325 Bacterial regulatory proteins, crp family A21D_03048 PF00899 ThiF family A21D_03049 PF00994 Probable molybdopterin binding domain A21D_03049 PF03453 MoeA N-terminal region (domain I and II) A21D_03049 PF03454 MoeA C-terminal region (domain IV) A21D_03051 PF02391 MoaE protein A21D_03052 PF00210 Ferritin-like domain A21D_03054 PF00302 Chloramphenicol acetyltransferase A21D_03055 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A21D_03055 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_03060 PF01047 MarR family A21D_03061 PF01177 Asp/Glu/Hydantoin racemase A21D_03062 PF10646 Sporulation and spore germination A21D_03063 PF01138 3' exoribonuclease family, domain 1 A21D_03063 PF03725 3' exoribonuclease family, domain 2 A21D_03064 PF01725 Ham1 family A21D_03065 PF12850 Calcineurin-like phosphoesterase superfamily domain A21D_03070 PF05697 Bacterial trigger factor protein (TF) A21D_03070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A21D_03070 PF05698 Bacterial trigger factor protein (TF) C-terminus A21D_03071 PF07724 AAA domain (Cdc48 subfamily) A21D_03071 PF10431 C-terminal, D2-small domain, of ClpB protein A21D_03071 PF06689 ClpX C4-type zinc finger A21D_03072 PF00004 ATPase family associated with various cellular activities (AAA) A21D_03072 PF02190 ATP-dependent protease La (LON) substrate-binding domain A21D_03072 PF05362 Lon protease (S16) C-terminal proteolytic domain A21D_03073 PF01926 50S ribosome-binding GTPase A21D_03075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A21D_03075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A21D_03075 PF01488 Shikimate / quinate 5-dehydrogenase A21D_03076 PF01578 Cytochrome C assembly protein A21D_03077 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A21D_03077 PF03900 Porphobilinogen deaminase, C-terminal domain A21D_03078 PF02602 Uroporphyrinogen-III synthase HemD A21D_03079 PF00490 Delta-aminolevulinic acid dehydratase A21D_03080 PF00202 Aminotransferase class-III A21D_03081 PF01476 LysM domain A21D_03083 PF10458 Valyl tRNA synthetase tRNA binding arm A21D_03083 PF00133 tRNA synthetases class I (I, L, M and V) A21D_03083 PF08264 Anticodon-binding domain of tRNA A21D_03084 PF08443 RimK-like ATP-grasp domain A21D_03084 PF18030 RimK PreATP-grasp domain A21D_03085 PF18030 RimK PreATP-grasp domain A21D_03085 PF08443 RimK-like ATP-grasp domain A21D_03086 PF02875 Mur ligase family, glutamate ligase domain A21D_03086 PF08245 Mur ligase middle domain A21D_03088 PF04002 RadC-like JAB domain A21D_03090 PF04085 rod shape-determining protein MreC A21D_03092 PF03775 Septum formation inhibitor MinC, C-terminal domain A21D_03093 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A21D_03095 PF02163 Peptidase family M50 A21D_03096 PF00829 Ribosomal prokaryotic L21 protein A21D_03097 PF04327 Cysteine protease Prp A21D_03098 PF01016 Ribosomal L27 protein A21D_03100 PF09269 Domain of unknown function (DUF1967) A21D_03100 PF01018 GTP1/OBG A21D_03100 PF01926 50S ribosome-binding GTPase A21D_03101 PF00800 Prephenate dehydratase A21D_03101 PF01842 ACT domain A21D_03102 PF01476 LysM domain A21D_03103 PF02540 NAD synthase A21D_03105 PF01709 Transcriptional regulator A21D_03106 PF01330 RuvA N terminal domain A21D_03106 PF07499 RuvA, C-terminal domain A21D_03107 PF17864 RuvB AAA lid domain A21D_03107 PF05496 Holliday junction DNA helicase RuvB P-loop domain A21D_03107 PF05491 RuvB C-terminal winged helix domain A21D_03108 PF11146 Protein of unknown function (DUF2905) A21D_03109 PF02547 Queuosine biosynthesis protein A21D_03110 PF01702 Queuine tRNA-ribosyltransferase A21D_03111 PF02699 Preprotein translocase subunit A21D_03112 PF12670 Protein of unknown function (DUF3792) A21D_03113 PF03600 Citrate transporter A21D_03114 PF14667 Polysaccharide biosynthesis C-terminal domain A21D_03114 PF01943 Polysaccharide biosynthesis protein A21D_03116 PF02355 Protein export membrane protein A21D_03116 PF07549 SecD/SecF GG Motif A21D_03117 PF06305 Lipopolysaccharide assembly protein A domain A21D_03118 PF10141 Single-strand DNA-specific exonuclease, C terminal domain A21D_03118 PF17768 RecJ OB domain A21D_03118 PF02272 DHHA1 domain A21D_03118 PF01368 DHH family A21D_03119 PF00156 Phosphoribosyl transferase domain A21D_03120 PF02824 TGS domain A21D_03120 PF13291 ACT domain A21D_03120 PF04607 Region found in RelA / SpoT proteins A21D_03121 PF02580 D-Tyr-tRNA(Tyr) deacylase A21D_03122 PF08239 Bacterial SH3 domain A21D_03122 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_03124 PF03129 Anticodon binding domain A21D_03124 PF13393 Histidyl-tRNA synthetase A21D_03125 PF00152 tRNA synthetases class II (D, K and N) A21D_03125 PF02938 GAD domain A21D_03125 PF01336 OB-fold nucleic acid binding domain A21D_03127 PF16193 AAA C-terminal domain A21D_03127 PF05496 Holliday junction DNA helicase RuvB P-loop domain A21D_03127 PF12002 MgsA AAA+ ATPase C terminal A21D_03128 PF02082 Transcriptional regulator A21D_03129 PF00266 Aminotransferase class-V A21D_03132 PF13538 UvrD-like helicase C-terminal domain A21D_03132 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain A21D_03132 PF14490 Helix-hairpin-helix containing domain A21D_03134 PF01594 AI-2E family transporter A21D_03135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A21D_03135 PF01411 tRNA synthetases class II (A) A21D_03135 PF02272 DHHA1 domain A21D_03136 PF06135 IreB regulatory phosphoprotein A21D_03137 PF03652 Holliday junction resolvase A21D_03138 PF06949 Protein of unknown function (DUF1292) A21D_03139 PF02618 YceG-like family A21D_03141 PF00485 Phosphoribulokinase / Uridine kinase family A21D_03142 PF03449 Transcription elongation factor, N-terminal A21D_03142 PF01272 Transcription elongation factor, GreA/GreB, C-term A21D_03143 PF07423 Domain of unknown function (DUF1510) A21D_03144 PF01048 Phosphorylase superfamily A21D_03147 PF04545 Sigma-70, region 4 A21D_03147 PF04542 Sigma-70 region 2 A21D_03148 PF01380 SIS domain A21D_03149 PF02378 Phosphotransferase system, EIIC A21D_03149 PF00367 phosphotransferase system, EIIB A21D_03152 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A21D_03154 PF00361 Proton-conducting membrane transporter A21D_03155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A21D_03156 PF13244 Domain of unknown function (DUF4040) A21D_03156 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A21D_03156 PF00361 Proton-conducting membrane transporter A21D_03158 PF08970 Sporulation inhibitor A A21D_03160 PF01926 50S ribosome-binding GTPase A21D_03161 PF01488 Shikimate / quinate 5-dehydrogenase A21D_03161 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A21D_03161 PF08501 Shikimate dehydrogenase substrate binding domain A21D_03162 PF01985 CRS1 / YhbY (CRM) domain A21D_03163 PF01467 Cytidylyltransferase-like A21D_03164 PF01966 HD domain A21D_03167 PF10531 SLBB domain A21D_03168 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A21D_03169 PF13567 Domain of unknown function (DUF4131) A21D_03169 PF03772 Competence protein A21D_03169 PF00753 Metallo-beta-lactamase superfamily A21D_03171 PF06144 DNA polymerase III, delta subunit A21D_03172 PF01649 Ribosomal protein S20 A21D_03173 PF03418 Germination protease A21D_03174 PF07454 Stage II sporulation protein P (SpoIIP) A21D_03176 PF03144 Elongation factor Tu domain 2 A21D_03176 PF14492 Elongation Factor G, domain II A21D_03176 PF06421 GTP-binding protein LepA C-terminus A21D_03176 PF00009 Elongation factor Tu GTP binding domain A21D_03176 PF00679 Elongation factor G C-terminus A21D_03177 PF06969 HemN C-terminal domain A21D_03177 PF04055 Radical SAM superfamily A21D_03178 PF01628 HrcA protein C terminal domain A21D_03179 PF01025 GrpE A21D_03180 PF00012 Hsp70 protein A21D_03181 PF00684 DnaJ central domain A21D_03181 PF00226 DnaJ domain A21D_03181 PF01556 DnaJ C terminal domain A21D_03183 PF04452 RNA methyltransferase A21D_03184 PF00919 Uncharacterized protein family UPF0004 A21D_03184 PF01938 TRAM domain A21D_03184 PF04055 Radical SAM superfamily A21D_03185 PF01791 DeoC/LacD family aldolase A21D_03186 PF01165 Ribosomal protein S21 A21D_03187 PF09424 Yqey-like protein A21D_03188 PF01972 Serine dehydrogenase proteinase A21D_03188 PF01957 NfeD-like C-terminal, partner-binding A21D_03189 PF12127 SigmaW regulon antibacterial A21D_03191 PF07873 YabP family A21D_03192 PF06898 Putative stage IV sporulation protein YqfD A21D_03193 PF02562 PhoH-like protein A21D_03194 PF07698 7TM receptor with intracellular HD hydrolase A21D_03194 PF07697 7TM-HD extracellular A21D_03194 PF01966 HD domain A21D_03195 PF02130 Uncharacterized protein family UPF0054 A21D_03197 PF07650 KH domain A21D_03197 PF01926 50S ribosome-binding GTPase A21D_03198 PF14006 YqzL-like protein A21D_03199 PF02565 Recombination protein O C terminal A21D_03199 PF11967 Recombination protein O N terminal A21D_03200 PF02091 Glycyl-tRNA synthetase alpha subunit A21D_03201 PF05746 DALR anticodon binding domain A21D_03201 PF02092 Glycyl-tRNA synthetase beta subunit A21D_03202 PF00571 CBS domain A21D_03202 PF08279 HTH domain A21D_03203 PF03618 Kinase/pyrophosphorylase A21D_03204 PF01807 CHC2 zinc finger A21D_03204 PF10410 DnaB-helicase binding domain of primase A21D_03204 PF08275 DNA primase catalytic core, N-terminal domain A21D_03205 PF04539 Sigma-70 region 3 A21D_03205 PF00140 Sigma-70 factor, region 1.2 A21D_03205 PF04545 Sigma-70, region 4 A21D_03205 PF03979 Sigma-70 factor, region 1.1 A21D_03205 PF04542 Sigma-70 region 2 A21D_03206 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A21D_03207 PF04816 tRNA (adenine(22)-N(1))-methyltransferase A21D_03208 PF01784 NIF3 (NGG1p interacting factor 3) A21D_03209 PF00270 DEAD/DEAH box helicase A21D_03209 PF00271 Helicase conserved C-terminal domain A21D_03210 PF01261 Xylose isomerase-like TIM barrel A21D_03214 PF01972 Serine dehydrogenase proteinase A21D_03214 PF01957 NfeD-like C-terminal, partner-binding A21D_03215 PF01895 PhoU domain A21D_03222 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A21D_03222 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A21D_03223 PF07690 Major Facilitator Superfamily A21D_03225 PF01895 PhoU domain A21D_03228 PF00471 Ribosomal protein L33 A21D_03229 PF01812 5-formyltetrahydrofolate cyclo-ligase family A21D_03231 PF01694 Rhomboid family A21D_03234 PF03323 Bacillus/Clostridium GerA spore germination protein A21D_03236 PF00480 ROK family A21D_03237 PF00884 Sulfatase A21D_03240 PF00753 Metallo-beta-lactamase superfamily A21D_03241 PF11117 Protein of unknown function (DUF2626) A21D_03248 PF00437 Type II/IV secretion system protein A21D_03249 PF14038 YqzE-like protein A21D_03250 PF11079 Bacterial protein YqhG of unknown function A21D_03251 PF00176 SNF2 family N-terminal domain A21D_03251 PF00271 Helicase conserved C-terminal domain A21D_03252 PF08669 Glycine cleavage T-protein C-terminal barrel domain A21D_03252 PF01571 Aminomethyltransferase folate-binding domain A21D_03253 PF02347 Glycine cleavage system P-protein A21D_03254 PF02347 Glycine cleavage system P-protein A21D_03255 PF00581 Rhodanese-like domain A21D_03256 PF01325 Iron dependent repressor, N-terminal DNA binding domain A21D_03256 PF02742 Iron dependent repressor, metal binding and dimerisation domain A21D_03257 PF01734 Patatin-like phospholipase A21D_03259 PF11085 Conserved membrane protein YqhR A21D_03260 PF00557 Metallopeptidase family M24 A21D_03260 PF01321 Creatinase/Prolidase N-terminal domain A21D_03261 PF09285 Elongation factor P, C-terminal A21D_03261 PF01132 Elongation factor P (EF-P) OB domain A21D_03261 PF08207 Elongation factor P (EF-P) KOW-like domain A21D_03263 PF09548 Stage III sporulation protein AB (spore_III_AB) A21D_03264 PF06686 Stage III sporulation protein AC/AD protein family A21D_03265 PF06686 Stage III sporulation protein AC/AD protein family A21D_03266 PF09546 Stage III sporulation protein AE (spore_III_AE) A21D_03267 PF09581 Stage III sporulation protein AF (Spore_III_AF) A21D_03269 PF12685 SpoIIIAH-like protein A21D_03270 PF00364 Biotin-requiring enzyme A21D_03271 PF00289 Biotin carboxylase, N-terminal domain A21D_03271 PF02785 Biotin carboxylase C-terminal domain A21D_03271 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A21D_03272 PF03780 Asp23 family, cell envelope-related function A21D_03273 PF01029 NusB family A21D_03274 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A21D_03274 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A21D_03275 PF02601 Exonuclease VII, large subunit A21D_03275 PF13742 OB-fold nucleic acid binding domain A21D_03276 PF02609 Exonuclease VII small subunit A21D_03277 PF00348 Polyprenyl synthetase A21D_03279 PF01479 S4 domain A21D_03279 PF01728 FtsJ-like methyltransferase A21D_03280 PF02863 Arginine repressor, C-terminal domain A21D_03280 PF01316 Arginine repressor, DNA binding domain A21D_03281 PF13476 AAA domain A21D_03282 PF05580 SpoIVB peptidase S55 A21D_03282 PF17820 PDZ domain A21D_03283 PF08769 Sporulation initiation factor Spo0A C terminal A21D_03283 PF00072 Response regulator receiver domain A21D_03284 PF13840 ACT domain A21D_03284 PF00696 Amino acid kinase family A21D_03285 PF11118 Protein of unknown function (DUF2627) A21D_03286 PF02954 Bacterial regulatory protein, Fis family A21D_03286 PF00989 PAS fold A21D_03286 PF00158 Sigma-54 interaction domain A21D_03287 PF01515 Phosphate acetyl/butaryl transferase A21D_03288 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A21D_03288 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A21D_03289 PF00871 Acetokinase family A21D_03290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_03291 PF00676 Dehydrogenase E1 component A21D_03292 PF02779 Transketolase, pyrimidine binding domain A21D_03292 PF02780 Transketolase, C-terminal domain A21D_03293 PF02817 e3 binding domain A21D_03293 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A21D_03293 PF00364 Biotin-requiring enzyme A21D_03294 PF06491 Disulphide isomerase A21D_03295 PF06081 Aromatic acid exporter family member 1 A21D_03295 PF11728 Putative aromatic acid exporter C-terminal domain A21D_03299 PF01546 Peptidase family M20/M25/M40 A21D_03299 PF07687 Peptidase dimerisation domain A21D_03300 PF11799 impB/mucB/samB family C-terminal domain A21D_03300 PF11798 IMS family HHH motif A21D_03300 PF00817 impB/mucB/samB family A21D_03302 PF00171 Aldehyde dehydrogenase family A21D_03303 PF00753 Metallo-beta-lactamase superfamily A21D_03304 PF03009 Glycerophosphoryl diester phosphodiesterase family A21D_03305 PF00753 Metallo-beta-lactamase superfamily A21D_03306 PF00106 short chain dehydrogenase A21D_03308 PF00248 Aldo/keto reductase family A21D_03309 PF00293 NUDIX domain A21D_03311 PF01944 Stage II sporulation protein M A21D_03312 PF01475 Ferric uptake regulator family A21D_03314 PF02899 Phage integrase, N-terminal SAM-like domain A21D_03314 PF00589 Phage integrase family A21D_03315 PF01676 Metalloenzyme superfamily A21D_03316 PF01048 Phosphorylase superfamily A21D_03317 PF00591 Glycosyl transferase family, a/b domain A21D_03317 PF02885 Glycosyl transferase family, helical bundle domain A21D_03317 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A21D_03318 PF00768 D-alanyl-D-alanine carboxypeptidase A21D_03318 PF07943 Penicillin-binding protein 5, C-terminal domain A21D_03319 PF01740 STAS domain A21D_03320 PF13581 Histidine kinase-like ATPase domain A21D_03321 PF04545 Sigma-70, region 4 A21D_03321 PF04539 Sigma-70 region 3 A21D_03321 PF04542 Sigma-70 region 2 A21D_03323 PF12164 Stage V sporulation protein AA A21D_03324 PF13782 Stage V sporulation protein AB A21D_03325 PF03323 Bacillus/Clostridium GerA spore germination protein A21D_03326 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A21D_03326 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A21D_03327 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A21D_03329 PF00583 Acetyltransferase (GNAT) family A21D_03331 PF02616 Segregation and condensation protein ScpA A21D_03332 PF04079 Segregation and condensation complex subunit ScpB A21D_03333 PF07943 Penicillin-binding protein 5, C-terminal domain A21D_03333 PF00768 D-alanyl-D-alanine carboxypeptidase A21D_03334 PF07670 Nucleoside recognition A21D_03335 PF07670 Nucleoside recognition A21D_03336 PF00849 RNA pseudouridylate synthase A21D_03336 PF01479 S4 domain A21D_03337 PF00578 AhpC/TSA family A21D_03338 PF05140 ResB-like family A21D_03339 PF01578 Cytochrome C assembly protein A21D_03340 PF00072 Response regulator receiver domain A21D_03340 PF00486 Transcriptional regulatory protein, C terminal A21D_03341 PF00989 PAS fold A21D_03341 PF00512 His Kinase A (phospho-acceptor) domain A21D_03341 PF18698 Histidine kinase sensor domain A21D_03341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_03341 PF00672 HAMP domain A21D_03346 PF00271 Helicase conserved C-terminal domain A21D_03346 PF00270 DEAD/DEAH box helicase A21D_03349 PF05389 Negative regulator of genetic competence (MecA) A21D_03350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A21D_03350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A21D_03352 PF17763 Glutaminase/Asparaginase C-terminal domain A21D_03352 PF00710 Asparaginase, N-terminal A21D_03353 PF13367 PrsW family intramembrane metalloprotease A21D_03354 PF01471 Putative peptidoglycan binding domain A21D_03354 PF07486 Cell Wall Hydrolase A21D_03355 PF14620 YpeB sporulation A21D_03355 PF03413 Peptidase propeptide and YPEB domain A21D_03357 PF02224 Cytidylate kinase A21D_03358 PF01553 Acyltransferase A21D_03359 PF00575 S1 RNA binding domain A21D_03360 PF14045 YIEGIA protein A21D_03362 PF01926 50S ribosome-binding GTPase A21D_03362 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A21D_03363 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A21D_03363 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A21D_03367 PF09547 Stage IV sporulation protein A (spore_IV_A) A21D_03368 PF00216 Bacterial DNA-binding protein A21D_03369 PF02081 Tryptophan RNA-binding attenuator protein A21D_03370 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 A21D_03371 PF01209 ubiE/COQ5 methyltransferase family A21D_03372 PF00348 Polyprenyl synthetase A21D_03373 PF00334 Nucleoside diphosphate kinase A21D_03374 PF01739 CheR methyltransferase, SAM binding domain A21D_03374 PF03705 CheR methyltransferase, all-alpha domain A21D_03375 PF01264 Chorismate synthase A21D_03376 PF01761 3-dehydroquinate synthase A21D_03377 PF07736 Chorismate mutase type I A21D_03378 PF00155 Aminotransferase class I and II A21D_03379 PF01842 ACT domain A21D_03379 PF02153 Prephenate dehydrogenase A21D_03380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A21D_03382 PF08858 IDEAL domain A21D_03382 PF08864 UPF0302 domain A21D_03383 PF10673 Protein of unknown function (DUF2487) A21D_03384 PF00355 Rieske [2Fe-2S] domain A21D_03385 PF00033 Cytochrome b/b6/petB A21D_03386 PF00032 Cytochrome b(C-terminal)/b6/petD A21D_03386 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A21D_03387 PF07187 Protein of unknown function (DUF1405) A21D_03389 PF04298 Putative neutral zinc metallopeptidase A21D_03392 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A21D_03392 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A21D_03393 PF03819 MazG nucleotide pyrophosphohydrolase domain A21D_03394 PF05173 Dihydrodipicolinate reductase, C-terminus A21D_03394 PF01113 Dihydrodipicolinate reductase, N-terminus A21D_03395 PF02142 MGS-like domain A21D_03396 PF13439 Glycosyltransferase Family 4 A21D_03396 PF00534 Glycosyl transferases group 1 A21D_03397 PF01743 Poly A polymerase head domain A21D_03397 PF12627 Probable RNA and SrmB- binding site of polymerase A A21D_03397 PF13735 tRNA nucleotidyltransferase domain 2 putative A21D_03398 PF03099 Biotin/lipoate A/B protein ligase family A21D_03398 PF08279 HTH domain A21D_03398 PF02237 Biotin protein ligase C terminal domain A21D_03399 PF13307 Helicase C-terminal domain A21D_03399 PF00929 Exonuclease A21D_03399 PF04851 Type III restriction enzyme, res subunit A21D_03400 PF14084 Protein of unknown function (DUF4264) A21D_03402 PF00155 Aminotransferase class I and II A21D_03403 PF01336 OB-fold nucleic acid binding domain A21D_03403 PF00152 tRNA synthetases class II (D, K and N) A21D_03404 PF07261 Replication initiation and membrane attachment A21D_03405 PF10576 Iron-sulfur binding domain of endonuclease III A21D_03405 PF00730 HhH-GPD superfamily base excision DNA repair protein A21D_03405 PF00633 Helix-hairpin-helix motif A21D_03406 PF00912 Transglycosylase A21D_03406 PF00905 Penicillin binding protein transpeptidase domain A21D_03407 PF03838 Recombination protein U A21D_03408 PF10720 Protein of unknown function (DUF2515) A21D_03412 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A21D_03413 PF05103 DivIVA protein A21D_03414 PF01170 Putative RNA methylase family UPF0020 A21D_03414 PF02926 THUMP domain A21D_03415 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A21D_03416 PF00195 Chalcone and stilbene synthases, N-terminal domain A21D_03416 PF02797 Chalcone and stilbene synthases, C-terminal domain A21D_03417 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family A21D_03418 PF02592 Putative vitamin uptake transporter A21D_03419 PF00916 Sulfate permease family A21D_03419 PF01740 STAS domain A21D_03420 PF00313 'Cold-shock' DNA-binding domain A21D_03421 PF01268 Formate--tetrahydrofolate ligase A21D_03422 PF01966 HD domain A21D_03424 PF00877 NlpC/P60 family A21D_03424 PF01476 LysM domain A21D_03425 PF00303 Thymidylate synthase A21D_03426 PF00186 Dihydrofolate reductase A21D_03427 PF02416 mttA/Hcf106 family A21D_03428 PF02416 mttA/Hcf106 family A21D_03429 PF00902 Sec-independent protein translocase protein (TatC) A21D_03430 PF06855 YozE SAM-like fold A21D_03431 PF00440 Bacterial regulatory proteins, tetR family A21D_03434 PF01625 Peptide methionine sulfoxide reductase A21D_03434 PF01641 SelR domain A21D_03436 PF00037 4Fe-4S binding domain A21D_03437 PF00708 Acylphosphatase A21D_03438 PF01266 FAD dependent oxidoreductase A21D_03438 PF00355 Rieske [2Fe-2S] domain A21D_03441 PF18801 response regulator aspartate phosphatase H, N terminal A21D_03442 PF13302 Acetyltransferase (GNAT) domain A21D_03444 PF13302 Acetyltransferase (GNAT) domain A21D_03448 PF00291 Pyridoxal-phosphate dependent enzyme A21D_03451 PF03649 Uncharacterised protein family (UPF0014) A21D_03452 PF00005 ABC transporter A21D_03452 PF09383 NIL domain A21D_03453 PF01367 5'-3' exonuclease, C-terminal SAM fold A21D_03453 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A21D_03454 PF00350 Dynamin family A21D_03455 PF00753 Metallo-beta-lactamase superfamily A21D_03455 PF16123 Hydroxyacylglutathione hydrolase C-terminus A21D_03456 PF01039 Carboxyl transferase domain A21D_03457 PF00378 Enoyl-CoA hydratase/isomerase A21D_03458 PF00364 Biotin-requiring enzyme A21D_03459 PF02785 Biotin carboxylase C-terminal domain A21D_03459 PF00289 Biotin carboxylase, N-terminal domain A21D_03459 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A21D_03460 PF13193 AMP-binding enzyme C-terminal domain A21D_03460 PF00501 AMP-binding enzyme A21D_03461 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A21D_03461 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A21D_03461 PF02770 Acyl-CoA dehydrogenase, middle domain A21D_03464 PF00521 DNA gyrase/topoisomerase IV, subunit A A21D_03464 PF03989 DNA gyrase C-terminal domain, beta-propeller A21D_03465 PF00986 DNA gyrase B subunit, carboxyl terminus A21D_03465 PF00204 DNA gyrase B A21D_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_03465 PF01751 Toprim domain A21D_03466 PF13380 CoA binding domain A21D_03467 PF00528 Binding-protein-dependent transport system inner membrane component A21D_03468 PF00571 CBS domain A21D_03468 PF00005 ABC transporter A21D_03469 PF02660 Glycerol-3-phosphate acyltransferase A21D_03470 PF02649 Type I GTP cyclohydrolase folE2 A21D_03471 PF01809 Putative membrane protein insertion efficiency factor A21D_03474 PF03061 Thioesterase superfamily A21D_03476 PF00578 AhpC/TSA family A21D_03477 PF00694 Aconitase C-terminal domain A21D_03477 PF00330 Aconitase family (aconitate hydratase) A21D_03478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_03478 PF00989 PAS fold A21D_03478 PF00512 His Kinase A (phospho-acceptor) domain A21D_03478 PF08447 PAS fold A21D_03479 PF11084 Protein of unknown function (DUF2621) A21D_03480 PF07301 Protein of unknown function (DUF1453) A21D_03481 PF00072 Response regulator receiver domain A21D_03482 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A21D_03483 PF02683 Cytochrome C biogenesis protein transmembrane region A21D_03484 PF03672 Uncharacterised protein family (UPF0154) A21D_03487 PF00456 Transketolase, thiamine diphosphate binding domain A21D_03487 PF02779 Transketolase, pyrimidine binding domain A21D_03487 PF02780 Transketolase, C-terminal domain A21D_03488 PF05979 Bacterial protein of unknown function (DUF896) A21D_03489 PF00239 Resolvase, N terminal domain A21D_03490 PF00239 Resolvase, N terminal domain A21D_03492 PF00717 Peptidase S24-like A21D_03492 PF01726 LexA DNA binding domain A21D_03493 PF13411 MerR HTH family regulatory protein A21D_03494 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_03494 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_03495 PF05067 Manganese containing catalase A21D_03496 PF00082 Subtilase family A21D_03502 PF05036 Sporulation related domain A21D_03502 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_03503 PF05036 Sporulation related domain A21D_03503 PF01520 N-acetylmuramoyl-L-alanine amidase A21D_03520 PF00574 Clp protease A21D_03541 PF09588 YqaJ-like viral recombinase domain A21D_03554 PF00717 Peptidase S24-like A21D_03554 PF01726 LexA DNA binding domain A21D_03555 PF02796 Helix-turn-helix domain of resolvase A21D_03555 PF00239 Resolvase, N terminal domain A21D_03556 PF05067 Manganese containing catalase A21D_03557 PF12652 CotJB protein A21D_03560 PF03951 Glutamine synthetase, beta-Grasp domain A21D_03560 PF00120 Glutamine synthetase, catalytic domain A21D_03561 PF13411 MerR HTH family regulatory protein A21D_03562 PF06838 Methionine gamma-lyase A21D_03563 PF13167 GTP-binding GTPase N-terminal A21D_03563 PF16360 GTP-binding GTPase Middle Region A21D_03563 PF01926 50S ribosome-binding GTPase A21D_03564 PF00004 ATPase family associated with various cellular activities (AAA) A21D_03564 PF17866 AAA lid domain A21D_03565 PF17209 Hfq protein A21D_03567 PF00210 Ferritin-like domain A21D_03568 PF01119 DNA mismatch repair protein, C-terminal domain A21D_03568 PF08676 MutL C terminal dimerisation domain A21D_03569 PF01624 MutS domain I A21D_03569 PF05188 MutS domain II A21D_03569 PF00488 MutS domain V A21D_03569 PF05190 MutS family domain IV A21D_03569 PF05192 MutS domain III A21D_03570 PF10628 Outer spore coat protein E (CotE) A21D_03571 PF06133 Control of competence regulator ComK, YlbF/YmcA A21D_03572 PF04055 Radical SAM superfamily A21D_03572 PF01938 TRAM domain A21D_03572 PF00919 Uncharacterized protein family UPF0004 A21D_03573 PF04232 Stage V sporulation protein S (SpoVS) A21D_03574 PF13277 YmdB-like protein A21D_03575 PF01966 HD domain A21D_03575 PF00013 KH domain A21D_03575 PF12072 Domain of unknown function (DUF3552) A21D_03576 PF00154 recA bacterial DNA recombination protein A21D_03577 PF18146 Damage-inducible protein CinA KH domain A21D_03577 PF00994 Probable molybdopterin binding domain A21D_03577 PF02464 Competence-damaged protein A21D_03578 PF01066 CDP-alcohol phosphatidyltransferase A21D_03579 PF13464 Domain of unknown function (DUF4115) A21D_03580 PF11868 Protein of unknown function (DUF3388) A21D_03581 PF11588 Protein of unknown function (DUF3243) A21D_03583 PF00675 Insulinase (Peptidase family M16) A21D_03583 PF05193 Peptidase M16 inactive domain A21D_03584 PF05193 Peptidase M16 inactive domain A21D_03589 PF07702 UTRA domain A21D_03589 PF00392 Bacterial regulatory proteins, gntR family A21D_03590 PF09397 Ftsk gamma domain A21D_03590 PF17854 FtsK alpha domain A21D_03590 PF01580 FtsK/SpoIIIE family A21D_03592 PF00574 Clp protease A21D_03593 PF00701 Dihydrodipicolinate synthetase family A21D_03594 PF13840 ACT domain A21D_03594 PF00696 Amino acid kinase family A21D_03595 PF01118 Semialdehyde dehydrogenase, NAD binding domain A21D_03595 PF02774 Semialdehyde dehydrogenase, dimerisation domain A21D_03596 PF02441 Flavoprotein A21D_03597 PF16924 Dipicolinate synthase subunit A N-terminal domain A21D_03597 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A21D_03598 PF05239 PRC-barrel domain A21D_03599 PF05193 Peptidase M16 inactive domain A21D_03599 PF00675 Insulinase (Peptidase family M16) A21D_03600 PF01522 Polysaccharide deacetylase A21D_03601 PF00013 KH domain A21D_03601 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A21D_03601 PF00575 S1 RNA binding domain A21D_03601 PF03725 3' exoribonuclease family, domain 2 A21D_03601 PF01138 3' exoribonuclease family, domain 1 A21D_03602 PF00312 Ribosomal protein S15 A21D_03603 PF06574 FAD synthetase A21D_03603 PF01687 Riboflavin kinase A21D_03604 PF01509 TruB family pseudouridylate synthase (N terminal domain) A21D_03604 PF16198 tRNA pseudouridylate synthase B C-terminal domain A21D_03605 PF02033 Ribosome-binding factor A A21D_03606 PF04456 Protein of unknown function (DUF503) A21D_03607 PF11987 Translation-initiation factor 2 A21D_03607 PF00009 Elongation factor Tu GTP binding domain A21D_03607 PF04760 Translation initiation factor IF-2, N-terminal region A21D_03609 PF04296 Protein of unknown function (DUF448) A21D_03610 PF08529 NusA N-terminal domain A21D_03610 PF13184 NusA-like KH domain A21D_03610 PF00575 S1 RNA binding domain A21D_03611 PF02576 RimP N-terminal domain A21D_03611 PF17384 RimP C-terminal SH3 domain A21D_03612 PF14480 DNA polymerase III polC-type N-terminus I A21D_03612 PF07733 Bacterial DNA polymerase III alpha NTPase domain A21D_03612 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A21D_03612 PF14579 Helix-hairpin-helix motif A21D_03612 PF01336 OB-fold nucleic acid binding domain A21D_03612 PF02811 PHP domain A21D_03612 PF00929 Exonuclease A21D_03612 PF11490 DNA polymerase III polC-type N-terminus II A21D_03613 PF02163 Peptidase family M50 A21D_03613 PF17820 PDZ domain A21D_03615 PF01255 Putative undecaprenyl diphosphate synthase A21D_03616 PF01765 Ribosome recycling factor A21D_03617 PF00696 Amino acid kinase family A21D_03618 PF00889 Elongation factor TS A21D_03619 PF00318 Ribosomal protein S2 A21D_03624 PF04545 Sigma-70, region 4 A21D_03624 PF04539 Sigma-70 region 3 A21D_03624 PF04542 Sigma-70 region 2 A21D_03625 PF03975 CheD chemotactic sensory transduction A21D_03626 PF04509 CheC-like family A21D_03627 PF01584 CheW-like domain A21D_03628 PF02895 Signal transducing histidine kinase, homodimeric domain A21D_03628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_03628 PF01584 CheW-like domain A21D_03628 PF01627 Hpt domain A21D_03628 PF07194 P2 response regulator binding domain A21D_03629 PF01339 CheB methylesterase A21D_03629 PF00072 Response regulator receiver domain A21D_03630 PF10609 NUBPL iron-transfer P-loop NTPase A21D_03631 PF00448 SRP54-type protein, GTPase domain A21D_03632 PF00771 FHIPEP family A21D_03633 PF01312 FlhB HrpN YscU SpaS Family A21D_03634 PF01311 Bacterial export proteins, family 1 A21D_03635 PF01313 Bacterial export proteins, family 3 A21D_03636 PF00813 FliP family A21D_03637 PF04347 Flagellar biosynthesis protein, FliO A21D_03638 PF00072 Response regulator receiver domain A21D_03639 PF04509 CheC-like family A21D_03639 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A21D_03640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A21D_03640 PF02154 Flagellar motor switch protein FliM A21D_03641 PF03748 Flagellar basal body-associated protein FliL A21D_03642 PF06289 Flagellar and Swarming motility proteins A21D_03643 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A21D_03643 PF00460 Flagella basal body rod protein A21D_03644 PF03963 Flagellar hook capping protein - N-terminal region A21D_03645 PF02120 Flagellar hook-length control protein FliK A21D_03648 PF18269 T3SS EscN ATPase C-terminal domain A21D_03648 PF02874 ATP synthase alpha/beta family, beta-barrel domain A21D_03648 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A21D_03650 PF01706 FliG C-terminal domain A21D_03650 PF14841 FliG middle domain A21D_03650 PF14842 FliG N-terminal domain A21D_03651 PF01514 Secretory protein of YscJ/FliF family A21D_03651 PF08345 Flagellar M-ring protein C-terminal A21D_03652 PF02049 Flagellar hook-basal body complex protein FliE A21D_03653 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A21D_03653 PF00460 Flagella basal body rod protein A21D_03654 PF00460 Flagella basal body rod protein A21D_03655 PF06018 CodY GAF-like domain A21D_03655 PF08222 CodY helix-turn-helix domain A21D_03656 PF00004 ATPase family associated with various cellular activities (AAA) A21D_03656 PF10431 C-terminal, D2-small domain, of ClpB protein A21D_03656 PF07724 AAA domain (Cdc48 subfamily) A21D_03657 PF00227 Proteasome subunit A21D_03658 PF00589 Phage integrase family A21D_03658 PF02899 Phage integrase, N-terminal SAM-like domain A21D_03659 PF01751 Toprim domain A21D_03659 PF01396 Topoisomerase DNA binding C4 zinc finger A21D_03659 PF01131 DNA topoisomerase A21D_03660 PF02481 DNA recombination-mediator protein A A21D_03661 PF02629 CoA binding domain A21D_03661 PF00549 CoA-ligase A21D_03662 PF00549 CoA-ligase A21D_03662 PF08442 ATP-grasp domain A21D_03663 PF01312 FlhB HrpN YscU SpaS Family A21D_03665 PF01351 Ribonuclease HII A21D_03666 PF01926 50S ribosome-binding GTPase A21D_03667 PF10502 Signal peptidase, peptidase S26 A21D_03668 PF01245 Ribosomal protein L19 A21D_03669 PF01746 tRNA (Guanine-1)-methyltransferase A21D_03670 PF05239 PRC-barrel domain A21D_03670 PF01782 RimM N-terminal domain A21D_03671 PF11068 YlqD protein A21D_03673 PF00886 Ribosomal protein S16 A21D_03674 PF02978 Signal peptide binding domain A21D_03674 PF02881 SRP54-type protein, helical bundle domain A21D_03674 PF00448 SRP54-type protein, GTPase domain A21D_03675 PF04297 Putative helix-turn-helix protein, YlxM / p13 like A21D_03677 PF02881 SRP54-type protein, helical bundle domain A21D_03677 PF00448 SRP54-type protein, GTPase domain A21D_03678 PF02463 RecF/RecN/SMC N terminal domain A21D_03678 PF06470 SMC proteins Flexible Hinge Domain A21D_03679 PF06569 Protein of unknown function (DUF1128) A21D_03680 PF00035 Double-stranded RNA binding motif A21D_03680 PF14622 Ribonuclease-III-like A21D_03681 PF00550 Phosphopantetheine attachment site A21D_03683 PF00698 Acyl transferase domain A21D_03684 PF02504 Fatty acid synthesis protein A21D_03686 PF00270 DEAD/DEAH box helicase A21D_03686 PF00271 Helicase conserved C-terminal domain A21D_03686 PF17191 RecG wedge domain A21D_03687 PF03313 Serine dehydratase alpha chain A21D_03688 PF03315 Serine dehydratase beta chain A21D_03688 PF01842 ACT domain A21D_03689 PF00860 Permease family A21D_03690 PF02734 DAK2 domain A21D_03690 PF13684 Dihydroxyacetone kinase family A21D_03691 PF03780 Asp23 family, cell envelope-related function A21D_03692 PF00830 Ribosomal L28 family A21D_03693 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain A21D_03693 PF04263 Thiamin pyrophosphokinase, catalytic domain A21D_03694 PF00834 Ribulose-phosphate 3 epimerase family A21D_03695 PF03193 RsgA GTPase A21D_03695 PF16745 RsgA N-terminal domain A21D_03696 PF03793 PASTA domain A21D_03696 PF00069 Protein kinase domain A21D_03698 PF01029 NusB family A21D_03698 PF01189 16S rRNA methyltransferase RsmB/F A21D_03699 PF02911 Formyl transferase, C-terminal domain A21D_03699 PF00551 Formyl transferase A21D_03700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A21D_03700 PF17764 3′ DNA-binding domain (3′BD) A21D_03700 PF04851 Type III restriction enzyme, res subunit A21D_03700 PF00271 Helicase conserved C-terminal domain A21D_03700 PF18074 Primosomal protein N C-terminal domain A21D_03701 PF04127 DNA / pantothenate metabolism flavoprotein A21D_03701 PF02441 Flavoprotein A21D_03702 PF01192 RNA polymerase Rpb6 A21D_03703 PF00625 Guanylate kinase A21D_03704 PF04025 Domain of unknown function (DUF370) A21D_03705 PF08340 Domain of unknown function (DUF1732) A21D_03705 PF03755 YicC-like family, N-terminal region A21D_03706 PF00689 Cation transporting ATPase, C-terminus A21D_03706 PF00690 Cation transporter/ATPase, N-terminus A21D_03707 PF01609 Transposase DDE domain A21D_03709 PF02566 OsmC-like protein A21D_03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_03710 PF03466 LysR substrate binding domain A21D_03711 PF08241 Methyltransferase domain A21D_03712 PF00156 Phosphoribosyl transferase domain A21D_03713 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A21D_03714 PF01180 Dihydroorotate dehydrogenase A21D_03715 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A21D_03715 PF00970 Oxidoreductase FAD-binding domain A21D_03716 PF02142 MGS-like domain A21D_03716 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A21D_03716 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A21D_03717 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A21D_03717 PF00117 Glutamine amidotransferase class-I A21D_03718 PF01979 Amidohydrolase family A21D_03719 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A21D_03719 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A21D_03720 PF00156 Phosphoribosyl transferase domain A21D_03721 PF01479 S4 domain A21D_03721 PF00849 RNA pseudouridylate synthase A21D_03722 PF01252 Signal peptidase (SPase) II A21D_03723 PF06827 Zinc finger found in FPG and IleRS A21D_03723 PF08264 Anticodon-binding domain of tRNA A21D_03723 PF00133 tRNA synthetases class I (I, L, M and V) A21D_03724 PF05103 DivIVA protein A21D_03725 PF01479 S4 domain A21D_03725 PF17774 Putative RNA-binding domain in YlmH A21D_03726 PF02325 YGGT family A21D_03727 PF04472 Cell division protein SepF A21D_03728 PF01168 Alanine racemase, N-terminal domain A21D_03730 PF05239 PRC-barrel domain A21D_03731 PF04542 Sigma-70 region 2 A21D_03731 PF04539 Sigma-70 region 3 A21D_03731 PF04545 Sigma-70, region 4 A21D_03732 PF04545 Sigma-70, region 4 A21D_03732 PF04542 Sigma-70 region 2 A21D_03733 PF03419 Sporulation factor SpoIIGA A21D_03734 PF12327 FtsZ family, C-terminal domain A21D_03734 PF00091 Tubulin/FtsZ family, GTPase domain A21D_03735 PF02491 SHS2 domain inserted in FTSA A21D_03736 PF08478 POTRA domain, FtsQ-type A21D_03737 PF01098 Cell cycle protein A21D_03738 PF02875 Mur ligase family, glutamate ligase domain A21D_03738 PF08245 Mur ligase middle domain A21D_03739 PF00953 Glycosyl transferase family 4 A21D_03740 PF01225 Mur ligase family, catalytic domain A21D_03740 PF02875 Mur ligase family, glutamate ligase domain A21D_03740 PF08245 Mur ligase middle domain A21D_03741 PF01225 Mur ligase family, catalytic domain A21D_03741 PF02875 Mur ligase family, glutamate ligase domain A21D_03741 PF08245 Mur ligase middle domain A21D_03742 PF00905 Penicillin binding protein transpeptidase domain A21D_03742 PF03793 PASTA domain A21D_03742 PF03717 Penicillin-binding Protein dimerisation domain A21D_03745 PF01795 MraW methylase family A21D_03746 PF02381 MraZ protein, putative antitoxin-like A21D_03747 PF10079 Bacillithiol biosynthesis BshC A21D_03749 PF13508 Acetyltransferase (GNAT) domain A21D_03751 PF01783 Ribosomal L32p protein family A21D_03752 PF02620 Large ribosomal RNA subunit accumulation protein YceD A21D_03753 PF05636 HIGH Nucleotidyl Transferase A21D_03754 PF13180 PDZ domain A21D_03754 PF05362 Lon protease (S16) C-terminal proteolytic domain A21D_03755 PF07670 Nucleoside recognition A21D_03756 PF01467 Cytidylyltransferase-like A21D_03758 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) A21D_03759 PF06133 Control of competence regulator ComK, YlbF/YmcA A21D_03761 PF14071 Putative coat protein A21D_03762 PF00188 Cysteine-rich secretory protein family A21D_03762 PF14504 CAP-associated N-terminal A21D_03763 PF08868 YugN-like family A21D_03764 PF01594 AI-2E family transporter A21D_03765 PF04238 Protein of unknown function (DUF420) A21D_03766 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) A21D_03767 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A21D_03768 PF00510 Cytochrome c oxidase subunit III A21D_03769 PF00115 Cytochrome C and Quinol oxidase polypeptide I A21D_03771 PF01040 UbiA prenyltransferase family A21D_03772 PF02628 Cytochrome oxidase assembly protein A21D_03773 PF02785 Biotin carboxylase C-terminal domain A21D_03773 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A21D_03773 PF00289 Biotin carboxylase, N-terminal domain A21D_03773 PF02436 Conserved carboxylase domain A21D_03773 PF00364 Biotin-requiring enzyme A21D_03773 PF00682 HMGL-like A21D_03774 PF01098 Cell cycle protein A21D_03775 PF07408 Protein of unknown function (DUF1507) A21D_03777 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) A21D_03780 PF14036 YlaH-like protein A21D_03782 PF00459 Inositol monophosphatase family A21D_03785 PF06335 Protein of unknown function (DUF1054) A21D_03786 PF05256 Uncharacterised protein family (UPF0223) A21D_03787 PF13790 SR1 protein A21D_03788 PF01522 Polysaccharide deacetylase A21D_03789 PF02028 BCCT, betaine/carnitine/choline family transporter A21D_03791 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_03791 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_03792 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A21D_03792 PF00364 Biotin-requiring enzyme A21D_03792 PF02817 e3 binding domain A21D_03793 PF02779 Transketolase, pyrimidine binding domain A21D_03793 PF02780 Transketolase, C-terminal domain A21D_03794 PF00676 Dehydrogenase E1 component A21D_03796 PF01327 Polypeptide deformylase A21D_03799 PF00753 Metallo-beta-lactamase superfamily A21D_03799 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A21D_03799 PF17770 Ribonuclease J C-terminal domain A21D_03800 PF02080 TrkA-C domain A21D_03800 PF02254 TrkA-N domain A21D_03801 PF00664 ABC transporter transmembrane region A21D_03801 PF00005 ABC transporter A21D_03802 PF00005 ABC transporter A21D_03802 PF00664 ABC transporter transmembrane region A21D_03804 PF00578 AhpC/TSA family A21D_03805 PF03698 Uncharacterised protein family (UPF0180) A21D_03806 PF07687 Peptidase dimerisation domain A21D_03806 PF01546 Peptidase family M20/M25/M40 A21D_03807 PF14602 Hexapeptide repeat of succinyl-transferase A21D_03807 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal A21D_03807 PF00132 Bacterial transferase hexapeptide (six repeats) A21D_03809 PF01022 Bacterial regulatory protein, arsR family A21D_03810 PF01545 Cation efflux family A21D_03810 PF16916 Dimerisation domain of Zinc Transporter A21D_03811 PF10518 TAT (twin-arginine translocation) pathway signal sequence A21D_03811 PF00149 Calcineurin-like phosphoesterase A21D_03812 PF14177 YkyB-like protein A21D_03817 PF00155 Aminotransferase class I and II A21D_03819 PF10502 Signal peptidase, peptidase S26 A21D_03822 PF13180 PDZ domain A21D_03822 PF17820 PDZ domain A21D_03824 PF00563 EAL domain A21D_03824 PF00990 Diguanylate cyclase, GGDEF domain A21D_03824 PF03707 Bacterial signalling protein N terminal repeat A21D_03825 PF02386 Cation transport protein A21D_03826 PF14183 YwpF-like protein A21D_03828 PF00881 Nitroreductase family A21D_03832 PF03862 SpoVAC/SpoVAEB sporulation membrane protein A21D_03833 PF07451 Stage V sporulation protein AD (SpoVAD) A21D_03834 PF03862 SpoVAC/SpoVAEB sporulation membrane protein A21D_03836 PF04239 Protein of unknown function (DUF421) A21D_03837 PF00375 Sodium:dicarboxylate symporter family A21D_03838 PF08240 Alcohol dehydrogenase GroES-like domain A21D_03838 PF00107 Zinc-binding dehydrogenase A21D_03839 PF02374 Anion-transporting ATPase A21D_03841 PF13722 5TM C-terminal transporter carbon starvation CstA A21D_03841 PF02554 Carbon starvation protein CstA A21D_03846 PF01609 Transposase DDE domain A21D_03847 PF04294 VanW like protein A21D_03849 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_03850 PF13193 AMP-binding enzyme C-terminal domain A21D_03850 PF00501 AMP-binding enzyme A21D_03851 PF00860 Permease family A21D_03853 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A21D_03854 PF00817 impB/mucB/samB family A21D_03854 PF11798 IMS family HHH motif A21D_03854 PF11799 impB/mucB/samB family C-terminal domain A21D_03855 PF00248 Aldo/keto reductase family A21D_03856 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A21D_03856 PF16924 Dipicolinate synthase subunit A N-terminal domain A21D_03857 PF13476 AAA domain A21D_03858 PF00149 Calcineurin-like phosphoesterase A21D_03858 PF12320 Type 5 capsule protein repressor C-terminal domain A21D_03859 PF08241 Methyltransferase domain A21D_03860 PF10026 Predicted Zn-dependent protease (DUF2268) A21D_03861 PF07690 Major Facilitator Superfamily A21D_03862 PF00375 Sodium:dicarboxylate symporter family A21D_03864 PF07992 Pyridine nucleotide-disulphide oxidoreductase A21D_03864 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A21D_03866 PF08240 Alcohol dehydrogenase GroES-like domain A21D_03866 PF00107 Zinc-binding dehydrogenase A21D_03867 PF03069 Acetamidase/Formamidase family A21D_03879 PF12538 DNA transporter A21D_03879 PF01580 FtsK/SpoIIIE family A21D_03880 PF10140 WXG100 protein secretion system (Wss), protein YukC A21D_03884 PF06013 Proteins of 100 residues with WXG A21D_03888 PF03009 Glycerophosphoryl diester phosphodiesterase family A21D_03889 PF03009 Glycerophosphoryl diester phosphodiesterase family A21D_03890 PF13416 Bacterial extracellular solute-binding protein A21D_03891 PF00528 Binding-protein-dependent transport system inner membrane component A21D_03892 PF00528 Binding-protein-dependent transport system inner membrane component A21D_03896 PF15975 Flotillin A21D_03896 PF01145 SPFH domain / Band 7 family A21D_03898 PF00486 Transcriptional regulatory protein, C terminal A21D_03900 PF13115 YtkA-like A21D_03901 PF05573 NosL A21D_03901 PF08220 DeoR-like helix-turn-helix domain A21D_03903 PF04143 Sulphur transport A21D_03906 PF00117 Glutamine amidotransferase class-I A21D_03907 PF00425 chorismate binding enzyme A21D_03907 PF04715 Anthranilate synthase component I, N terminal region A21D_03908 PF02535 ZIP Zinc transporter A21D_03911 PF11132 Transcriptional regulator protein (SplA) A21D_03912 PF09370 Phosphoenolpyruvate hydrolase-like A21D_03914 PF09370 Phosphoenolpyruvate hydrolase-like A21D_03915 PF10997 Alternate to MurJ A21D_03916 PF10997 Alternate to MurJ A21D_03917 PF00149 Calcineurin-like phosphoesterase A21D_03919 PF06339 Ectoine synthase A21D_03920 PF00202 Aminotransferase class-III A21D_03921 PF00583 Acetyltransferase (GNAT) family A21D_03922 PF01609 Transposase DDE domain A21D_03923 PF01979 Amidohydrolase family A21D_03925 PF00011 Hsp20/alpha crystallin family A21D_03929 PF00005 ABC transporter A21D_03932 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal A21D_03932 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal A21D_03933 PF13426 PAS domain A21D_03933 PF01740 STAS domain A21D_03934 PF03992 Antibiotic biosynthesis monooxygenase A21D_03936 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A21D_03938 PF03480 Bacterial extracellular solute-binding protein, family 7 A21D_03940 PF01557 Fumarylacetoacetate (FAA) hydrolase family A21D_03941 PF01557 Fumarylacetoacetate (FAA) hydrolase family A21D_03942 PF00701 Dihydrodipicolinate synthetase family A21D_03943 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A21D_03944 PF00171 Aldehyde dehydrogenase family A21D_03945 PF01613 Flavin reductase like domain A21D_03946 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal A21D_03946 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal A21D_03947 PF03466 LysR substrate binding domain A21D_03947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A21D_03948 PF07690 Major Facilitator Superfamily A21D_03949 PF01553 Acyltransferase A21D_03951 PF02780 Transketolase, C-terminal domain A21D_03951 PF02779 Transketolase, pyrimidine binding domain A21D_03951 PF00456 Transketolase, thiamine diphosphate binding domain A21D_03952 PF03611 PTS system sugar-specific permease component A21D_03954 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A21D_03955 PF03358 NADPH-dependent FMN reductase A21D_03956 PF00884 Sulfatase A21D_03957 PF00266 Aminotransferase class-V A21D_03958 PF02660 Glycerol-3-phosphate acyltransferase A21D_03962 PF03631 Virulence factor BrkB A21D_03963 PF01435 Peptidase family M48 A21D_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A21D_03965 PF00672 HAMP domain A21D_03965 PF00512 His Kinase A (phospho-acceptor) domain A21D_03966 PF00486 Transcriptional regulatory protein, C terminal A21D_03966 PF00072 Response regulator receiver domain A21D_03968 PF00107 Zinc-binding dehydrogenase A21D_03968 PF08240 Alcohol dehydrogenase GroES-like domain A21D_03971 PF00364 Biotin-requiring enzyme A21D_03971 PF02817 e3 binding domain A21D_03971 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A21D_03972 PF02780 Transketolase, C-terminal domain A21D_03972 PF02779 Transketolase, pyrimidine binding domain A21D_03973 PF00676 Dehydrogenase E1 component A21D_03974 PF02954 Bacterial regulatory protein, Fis family A21D_03974 PF00158 Sigma-54 interaction domain A21D_03974 PF01590 GAF domain A21D_03978 PF02661 Fic/DOC family A21D_03987 PF01471 Putative peptidoglycan binding domain A21D_03987 PF01476 LysM domain A21D_03987 PF01510 N-acetylmuramoyl-L-alanine amidase A21D_03988 PF05105 Bacteriophage holin family