CFK40_00055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_00060 SM00318 Staphylococcal nuclease homologues CFK40_00085 SM00422 helix_turn_helix, mercury resistance CFK40_00125 SM01022 CFK40_00125 CFK40_00145 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_00155 SM00450 Rhodanese Homology Domain CFK40_00185 SM00257 Lysin motif CFK40_00185 SM00636 CFK40_00185 CFK40_00235 SM01266 CFK40_00235 CFK40_00245 SM00567 E-Z type HEAT repeats CFK40_00245 SM00932 Scaffold protein Nfu/NifU N terminal CFK40_00285 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_00285 SM00895 CFK40_00285 CFK40_00305 SM01321 CFK40_00305 CFK40_00320 SM00986 Uracil DNA glycosylase superfamily CFK40_00320 SM00987 UreE urease accessory protein, C-terminal domain CFK40_00385 SM00382 ATPases associated with a variety of cellular activities CFK40_00390 SM00382 ATPases associated with a variety of cellular activities CFK40_00435 SM00938 Nitrogen regulatory protein P-II CFK40_00475 SM00344 helix_turn_helix ASNC type CFK40_00525 SM00822 CFK40_00525 CFK40_00535 SM00829 Enoylreductase CFK40_00540 SM00422 helix_turn_helix, mercury resistance CFK40_00590 SM00382 ATPases associated with a variety of cellular activities CFK40_00600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_00600 SM00387 Histidine kinase-like ATPases CFK40_00600 SM00388 His Kinase A (phosphoacceptor) domain CFK40_00605 SM00448 cheY-homologous receiver domain CFK40_00605 SM00862 Transcriptional regulatory protein, C terminal CFK40_00760 SM00646 CFK40_00760 CFK40_00810 SM00382 ATPases associated with a variety of cellular activities CFK40_00815 SM00382 ATPases associated with a variety of cellular activities CFK40_00825 SM00662 RNA polymerases D CFK40_00845 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_00905 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CFK40_00910 SM01374 CFK40_00910 CFK40_00930 SM00322 K homology RNA-binding domain CFK40_00945 SM01382 CFK40_00945 CFK40_00945 SM01383 CFK40_00945 CFK40_00965 SM01403 CFK40_00965 CFK40_00980 SM00838 Elongation factor G C-terminus CFK40_00980 SM00889 Elongation factor G, domain IV CFK40_01000 SM00663 RNA polymerase I subunit A N-terminus CFK40_01030 SM00649 Ribosomal protein L11/L12 CFK40_01035 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CFK40_01060 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFK40_01065 SM00535 Ribonuclease III family CFK40_01070 SM00840 CFK40_01070 CFK40_01085 SM00670 Large family of predicted nucleotide-binding domains CFK40_01090 SM00382 ATPases associated with a variety of cellular activities CFK40_01095 SM00382 ATPases associated with a variety of cellular activities CFK40_01095 SM01086 C-terminal, D2-small domain, of ClpB protein CFK40_01200 SM00530 Helix-turn-helix XRE-family like proteins CFK40_01210 SM00905 Dihydroneopterin aldolase CFK40_01240 SM00382 ATPases associated with a variety of cellular activities CFK40_01250 SM00977 TilS substrate C-terminal domain CFK40_01255 SM00220 Serine/Threonine protein kinases, catalytic domain CFK40_01265 SM00331 Sigma factor PP2C-like phosphatases CFK40_01265 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFK40_01275 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_01300 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_01310 SM00363 S4 RNA-binding domain CFK40_01325 SM00966 SpoVT / AbrB like domain CFK40_01330 SM00487 DEAD-like helicases superfamily CFK40_01330 SM00490 helicase superfamily c-terminal domain CFK40_01330 SM00982 CFK40_01330 CFK40_01330 SM01058 CarD-like/TRCF domain CFK40_01350 SM01400 CFK40_01350 CFK40_01390 SM00650 Ribosomal RNA adenine dimethylases CFK40_01395 SM00493 CFK40_01395 CFK40_01400 SM01208 CFK40_01400 CFK40_01415 SM00966 SpoVT / AbrB like domain CFK40_01425 SM00465 GIY-YIG type nucleases (URI domain) CFK40_01445 SM00382 ATPases associated with a variety of cellular activities CFK40_01490 SM00493 CFK40_01490 CFK40_01500 SM00382 ATPases associated with a variety of cellular activities CFK40_01520 SM00257 Lysin motif CFK40_01520 SM00636 CFK40_01520 CFK40_01580 SM00936 Penicillin-binding protein 5, C-terminal domain CFK40_01585 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_01585 SM01240 CFK40_01585 CFK40_01605 SM00434 DNA Topoisomerase IV CFK40_01610 SM00387 Histidine kinase-like ATPases CFK40_01610 SM00433 TopoisomeraseII CFK40_01630 SM00480 DNA polymerase III beta subunit CFK40_01635 SM00382 ATPases associated with a variety of cellular activities CFK40_01635 SM00760 Bacterial dnaA protein helix-turn-helix domain CFK40_01655 SM00393 Putative single-stranded nucleic acids-binding domain CFK40_01655 SM01245 CFK40_01655 CFK40_01670 SM01228 CFK40_01670 CFK40_01680 SM00470 ParB-like nuclease domain CFK40_01690 SM00470 ParB-like nuclease domain CFK40_01750 SM00382 ATPases associated with a variety of cellular activities CFK40_01775 SM00267 diguanylate cyclase CFK40_01790 SM00788 Adenylosuccinate synthetase CFK40_01795 SM00448 cheY-homologous receiver domain CFK40_01795 SM00862 Transcriptional regulatory protein, C terminal CFK40_01800 SM00091 PAS domain CFK40_01800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_01800 SM00387 Histidine kinase-like ATPases CFK40_01800 SM00388 His Kinase A (phosphoacceptor) domain CFK40_01815 SM00849 Metallo-beta-lactamase superfamily CFK40_01820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_01830 SM00382 ATPases associated with a variety of cellular activities CFK40_01865 SM00382 ATPases associated with a variety of cellular activities CFK40_01905 SM00382 ATPases associated with a variety of cellular activities CFK40_02050 SM00487 DEAD-like helicases superfamily CFK40_02050 SM00490 helicase superfamily c-terminal domain CFK40_02060 SM00382 ATPases associated with a variety of cellular activities CFK40_02110 SM00763 PrkA AAA domain CFK40_02210 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_02210 SM00382 ATPases associated with a variety of cellular activities CFK40_02230 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CFK40_02240 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_02255 SM00450 Rhodanese Homology Domain CFK40_02260 SM00450 Rhodanese Homology Domain CFK40_02260 SM00849 Metallo-beta-lactamase superfamily CFK40_02295 SM00448 cheY-homologous receiver domain CFK40_02295 SM00862 Transcriptional regulatory protein, C terminal CFK40_02300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_02300 SM00387 Histidine kinase-like ATPases CFK40_02300 SM00388 His Kinase A (phosphoacceptor) domain CFK40_02305 SM00704 CDGSH-type zinc finger. Function unknown. CFK40_02340 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_02370 SM00829 Enoylreductase CFK40_02390 SM00421 helix_turn_helix, Lux Regulon CFK40_02390 SM00448 cheY-homologous receiver domain CFK40_02455 SM01060 CFK40_02455 CFK40_02475 SM00422 helix_turn_helix, mercury resistance CFK40_02520 SM00287 Bacterial SH3 domain homologues CFK40_02520 SM00646 CFK40_02520 CFK40_02570 SM00487 DEAD-like helicases superfamily CFK40_02570 SM00490 helicase superfamily c-terminal domain CFK40_02640 SM00382 ATPases associated with a variety of cellular activities CFK40_02645 SM00382 ATPases associated with a variety of cellular activities CFK40_02650 SM00257 Lysin motif CFK40_02665 SM00382 ATPases associated with a variety of cellular activities CFK40_02705 SM00155 Phospholipase D. Active site motifs. CFK40_02745 SM00341 Helicase and RNase D C-terminal CFK40_02745 SM00487 DEAD-like helicases superfamily CFK40_02745 SM00490 helicase superfamily c-terminal domain CFK40_02745 SM00956 CFK40_02745 CFK40_02795 SM00903 Flavin reductase like domain CFK40_02890 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_02895 SM00822 CFK40_02895 CFK40_02920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_02955 SM00836 DALR anticodon binding domain CFK40_02955 SM01016 Arginyl tRNA synthetase N terminal dom CFK40_02990 SM00382 ATPases associated with a variety of cellular activities CFK40_03015 SM00448 cheY-homologous receiver domain CFK40_03040 SM00357 Cold shock protein domain CFK40_03040 SM00382 ATPases associated with a variety of cellular activities CFK40_03040 SM00959 Rho termination factor, N-terminal domain CFK40_03060 SM00937 CFK40_03060 CFK40_03090 SM00382 ATPases associated with a variety of cellular activities CFK40_03095 SM00382 ATPases associated with a variety of cellular activities CFK40_03105 SM00226 Low molecular weight phosphatase family CFK40_03175 SM00382 ATPases associated with a variety of cellular activities CFK40_03205 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_03305 SM00382 ATPases associated with a variety of cellular activities CFK40_03425 SM00047 Lysozyme subfamily 2 CFK40_03425 SM00287 Bacterial SH3 domain homologues CFK40_03445 SM00382 ATPases associated with a variety of cellular activities CFK40_03450 SM00644 CFK40_03450 CFK40_03495 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_03495 SM00895 CFK40_03495 CFK40_03510 SM00344 helix_turn_helix ASNC type CFK40_03660 SM00354 helix_turn _helix lactose operon repressor CFK40_03685 SM00342 helix_turn_helix, arabinose operon control protein CFK40_03705 SM00872 Alpha mannosidase, middle domain CFK40_03715 SM00872 Alpha mannosidase, middle domain CFK40_03720 SM01149 CFK40_03720 CFK40_03740 SM00812 Alpha-L-fucosidase CFK40_03745 SM00354 helix_turn _helix lactose operon repressor CFK40_03770 SM00382 ATPases associated with a variety of cellular activities CFK40_03775 SM00382 ATPases associated with a variety of cellular activities CFK40_03805 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_03825 SM00812 Alpha-L-fucosidase CFK40_03855 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CFK40_03865 SM01038 Beta galactosidase small chain CFK40_03875 SM00812 Alpha-L-fucosidase CFK40_03880 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_03880 SM00866 CFK40_03880 CFK40_03900 SM01133 CFK40_03900 CFK40_03960 SM00257 Lysin motif CFK40_03980 SM00421 helix_turn_helix, Lux Regulon CFK40_03980 SM00448 cheY-homologous receiver domain CFK40_03995 SM00984 UDP binding domain CFK40_04060 SM00382 ATPases associated with a variety of cellular activities CFK40_04065 SM00382 ATPases associated with a variety of cellular activities CFK40_04080 SM00346 helix_turn_helix isocitrate lyase regulation CFK40_04100 SM00530 Helix-turn-helix XRE-family like proteins CFK40_04135 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_04135 SM00866 CFK40_04135 CFK40_04155 SM00382 ATPases associated with a variety of cellular activities CFK40_04160 SM00382 ATPases associated with a variety of cellular activities CFK40_04210 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_04210 SM00895 CFK40_04210 CFK40_04250 SM00382 ATPases associated with a variety of cellular activities CFK40_04265 SM00488 CFK40_04265 CFK40_04265 SM00491 CFK40_04265 CFK40_04400 SM00861 Transketolase, pyrimidine binding domain CFK40_04405 SM00470 ParB-like nuclease domain CFK40_04410 SM00861 Transketolase, pyrimidine binding domain CFK40_04445 SM00872 Alpha mannosidase, middle domain CFK40_04485 SM00872 Alpha mannosidase, middle domain CFK40_04545 SM01149 CFK40_04545 CFK40_04575 SM00382 ATPases associated with a variety of cellular activities CFK40_04580 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_04590 SM00448 cheY-homologous receiver domain CFK40_04590 SM01012 CFK40_04590 CFK40_04600 SM00877 CFK40_04600 CFK40_04625 SM00877 CFK40_04625 CFK40_04635 SM00877 CFK40_04635 CFK40_04655 SM00877 CFK40_04655 CFK40_04670 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_04670 SM00895 CFK40_04670 CFK40_04675 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_04675 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFK40_04690 SM00382 ATPases associated with a variety of cellular activities CFK40_04695 SM00257 Lysin motif CFK40_04750 SM00382 ATPases associated with a variety of cellular activities CFK40_04775 SM00450 Rhodanese Homology Domain CFK40_04780 SM00829 Enoylreductase CFK40_04825 SM00861 Transketolase, pyrimidine binding domain CFK40_04860 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_04860 SM00895 CFK40_04860 CFK40_04920 SM00382 ATPases associated with a variety of cellular activities CFK40_04925 SM00382 ATPases associated with a variety of cellular activities CFK40_05000 SM00986 Uracil DNA glycosylase superfamily CFK40_05000 SM00987 UreE urease accessory protein, C-terminal domain CFK40_05070 SM00984 UDP binding domain CFK40_05140 SM00354 helix_turn _helix lactose operon repressor CFK40_05180 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_05285 SM01329 CFK40_05285 CFK40_05300 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_05300 SM00895 CFK40_05300 CFK40_05330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_05330 SM00895 CFK40_05330 CFK40_05370 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_05390 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CFK40_05430 SM00646 CFK40_05430 CFK40_05445 SM00382 ATPases associated with a variety of cellular activities CFK40_05505 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_05505 SM00895 CFK40_05505 CFK40_05560 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CFK40_05560 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CFK40_05600 SM00448 cheY-homologous receiver domain CFK40_05600 SM00850 LytTr DNA-binding domain CFK40_05605 SM00387 Histidine kinase-like ATPases CFK40_05760 SM00382 ATPases associated with a variety of cellular activities CFK40_05795 SM00382 ATPases associated with a variety of cellular activities CFK40_05820 SM01130 CFK40_05820 CFK40_05865 SM00829 Enoylreductase CFK40_05870 SM01133 CFK40_05870 CFK40_05875 SM00829 Enoylreductase CFK40_05880 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_05880 SM00866 CFK40_05880 CFK40_05925 SM01329 CFK40_05925 CFK40_05990 SM00354 helix_turn _helix lactose operon repressor CFK40_06130 SM00382 ATPases associated with a variety of cellular activities CFK40_06185 SM00382 ATPases associated with a variety of cellular activities CFK40_06195 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_06195 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFK40_06270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFK40_06270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFK40_06270 SM00493 CFK40_06270 CFK40_06275 SM00387 Histidine kinase-like ATPases CFK40_06280 SM00448 cheY-homologous receiver domain CFK40_06345 SM00642 Alpha-amylase domain CFK40_06370 SM00354 helix_turn _helix lactose operon repressor CFK40_06480 SM00382 ATPases associated with a variety of cellular activities CFK40_06510 SM00855 Phosphoglycerate mutase family CFK40_06625 SM00530 Helix-turn-helix XRE-family like proteins CFK40_06645 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_06645 SM00866 CFK40_06645 CFK40_06665 SM00387 Histidine kinase-like ATPases CFK40_06670 SM00421 helix_turn_helix, Lux Regulon CFK40_06670 SM00448 cheY-homologous receiver domain CFK40_06680 SM00487 DEAD-like helicases superfamily CFK40_06680 SM00490 helicase superfamily c-terminal domain CFK40_06750 SM00957 SecA DEAD-like domain CFK40_06750 SM00958 SecA preprotein cross-linking domain CFK40_06755 SM00937 CFK40_06755 CFK40_06765 SM00382 ATPases associated with a variety of cellular activities CFK40_06780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_06780 SM00245 tail specific protease CFK40_06795 SM00487 DEAD-like helicases superfamily CFK40_06795 SM00490 helicase superfamily c-terminal domain CFK40_06920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFK40_06940 SM01192 CFK40_06940 CFK40_06940 SM01193 CFK40_06940 CFK40_06975 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_06975 SM00357 Cold shock protein domain CFK40_06975 SM00955 CFK40_06975 CFK40_07060 SM00382 ATPases associated with a variety of cellular activities CFK40_07180 SM00387 Histidine kinase-like ATPases CFK40_07185 SM00421 helix_turn_helix, Lux Regulon CFK40_07185 SM00448 cheY-homologous receiver domain CFK40_07220 SM01091 Transporter associated domain CFK40_07245 SM00382 ATPases associated with a variety of cellular activities CFK40_07300 SM00493 CFK40_07300 CFK40_07310 SM00382 ATPases associated with a variety of cellular activities CFK40_07310 SM00930 CFK40_07310 CFK40_07325 SM00382 ATPases associated with a variety of cellular activities CFK40_07435 SM00387 Histidine kinase-like ATPases CFK40_07440 SM00448 cheY-homologous receiver domain CFK40_07625 SM01298 CFK40_07625 CFK40_07650 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_07675 SM00382 ATPases associated with a variety of cellular activities CFK40_07675 SM00930 CFK40_07675 CFK40_07785 SM00382 ATPases associated with a variety of cellular activities CFK40_07805 SM00382 ATPases associated with a variety of cellular activities CFK40_07835 SM00382 ATPases associated with a variety of cellular activities CFK40_07845 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_07845 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFK40_07865 SM00450 Rhodanese Homology Domain CFK40_07900 SM00363 S4 RNA-binding domain CFK40_07940 SM00849 Metallo-beta-lactamase superfamily CFK40_07970 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CFK40_08015 SM00382 ATPases associated with a variety of cellular activities CFK40_08015 SM00843 CFK40_08015 CFK40_08040 SM00354 helix_turn _helix lactose operon repressor CFK40_08060 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_08080 SM00363 S4 RNA-binding domain CFK40_08085 SM00363 S4 RNA-binding domain CFK40_08085 SM01390 CFK40_08085 CFK40_08090 SM00267 diguanylate cyclase CFK40_08095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFK40_08115 SM00981 CFK40_08115 CFK40_08160 SM00852 Probable molybdopterin binding domain CFK40_08170 SM00850 LytTr DNA-binding domain CFK40_08175 SM00382 ATPases associated with a variety of cellular activities CFK40_08220 SM00849 Metallo-beta-lactamase superfamily CFK40_08250 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_08295 SM00481 DNA polymerase alpha chain like domain CFK40_08300 SM00919 Malic enzyme, NAD binding domain CFK40_08300 SM01274 CFK40_08300 CFK40_08305 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_08345 SM01329 CFK40_08345 CFK40_08360 SM00448 cheY-homologous receiver domain CFK40_08360 SM00862 Transcriptional regulatory protein, C terminal CFK40_08365 SM00091 PAS domain CFK40_08365 SM00387 Histidine kinase-like ATPases CFK40_08365 SM00388 His Kinase A (phosphoacceptor) domain CFK40_08370 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFK40_08370 SM00474 3'-5' exonuclease CFK40_08370 SM00475 5'-3' exonuclease CFK40_08370 SM00482 DNA polymerase A domain CFK40_08375 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CFK40_08375 SM01232 CFK40_08375 CFK40_08385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFK40_08410 SM00382 ATPases associated with a variety of cellular activities CFK40_08420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_08470 SM00382 ATPases associated with a variety of cellular activities CFK40_08495 SM00967 RNA 2'-O ribose methyltransferase substrate binding CFK40_08505 SM00873 B3/4 domain CFK40_08505 SM00874 tRNA synthetase B5 domain CFK40_08505 SM00896 Ferredoxin-fold anticodon binding domain CFK40_08525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFK40_08525 SM00481 DNA polymerase alpha chain like domain CFK40_08525 SM00483 DNA polymerase X family CFK40_08530 SM00463 Small MutS-related domain CFK40_08530 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CFK40_08530 SM00534 ATPase domain of DNA mismatch repair MUTS family CFK40_08555 SM00893 Electron transfer flavoprotein domain CFK40_08560 SM00893 Electron transfer flavoprotein domain CFK40_08570 SM00465 GIY-YIG type nucleases (URI domain) CFK40_08600 SM00421 helix_turn_helix, Lux Regulon CFK40_08630 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_08640 SM00909 Sporulation and spore germination CFK40_08680 SM00382 ATPases associated with a variety of cellular activities CFK40_08680 SM00994 ClpX C4-type zinc finger CFK40_08680 SM01086 C-terminal, D2-small domain, of ClpB protein CFK40_08685 SM00382 ATPases associated with a variety of cellular activities CFK40_08685 SM00464 Found in ATP-dependent protease La (LON) CFK40_08695 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_08695 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CFK40_08705 SM00382 ATPases associated with a variety of cellular activities CFK40_08735 SM01004 Delta-aminolevulinic acid dehydratase CFK40_08745 SM00257 Lysin motif CFK40_08780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CFK40_08780 SM00267 diguanylate cyclase CFK40_08855 SM00257 Lysin motif CFK40_08875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFK40_08880 SM00382 ATPases associated with a variety of cellular activities CFK40_08900 SM01323 CFK40_08900 CFK40_08940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_08940 SM00954 Region found in RelA / SpoT proteins CFK40_08950 SM00287 Bacterial SH3 domain homologues CFK40_08950 SM00646 CFK40_08950 CFK40_08975 SM00382 ATPases associated with a variety of cellular activities CFK40_08995 SM00028 Tetratricopeptide repeats CFK40_09015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_09025 SM00732 Likely ribonuclease with RNase H fold. CFK40_09125 SM01103 CFK40_09125 CFK40_09135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_09150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFK40_09160 SM00849 Metallo-beta-lactamase superfamily CFK40_09195 SM00838 Elongation factor G C-terminus CFK40_09200 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_09220 SM00271 DnaJ molecular chaperone homology domain CFK40_09235 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_09240 SM01133 CFK40_09240 CFK40_09285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_09325 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_09335 SM00400 zinc finger CFK40_09335 SM00493 CFK40_09335 CFK40_09360 SM00487 DEAD-like helicases superfamily CFK40_09360 SM00490 helicase superfamily c-terminal domain CFK40_09365 SM00518 AP endonuclease family 2 CFK40_09375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_09385 SM00226 Low molecular weight phosphatase family CFK40_09470 SM00382 ATPases associated with a variety of cellular activities CFK40_09510 SM00028 Tetratricopeptide repeats CFK40_09545 SM00849 Metallo-beta-lactamase superfamily CFK40_09585 SM00382 ATPases associated with a variety of cellular activities CFK40_09605 SM00487 DEAD-like helicases superfamily CFK40_09605 SM00490 helicase superfamily c-terminal domain CFK40_09630 SM00530 Helix-turn-helix XRE-family like proteins CFK40_09670 SM00450 Rhodanese Homology Domain CFK40_09685 SM00507 HNH nucleases CFK40_09705 SM01057 Eukaryotic-type carbonic anhydrase CFK40_09715 SM00529 Helix-turn-helix diphteria tox regulatory element CFK40_09745 SM00841 Elongation factor P, C-terminal CFK40_09745 SM01185 CFK40_09745 CFK40_09760 SM00382 ATPases associated with a variety of cellular activities CFK40_09805 SM00878 Biotin carboxylase C-terminal domain CFK40_09845 SM00363 S4 RNA-binding domain CFK40_09860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_09865 SM00448 cheY-homologous receiver domain CFK40_09900 SM00530 Helix-turn-helix XRE-family like proteins CFK40_09915 SM00507 HNH nucleases CFK40_09990 SM00091 PAS domain CFK40_09990 SM00382 ATPases associated with a variety of cellular activities CFK40_10000 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_10020 SM00861 Transketolase, pyrimidine binding domain CFK40_10075 SM01022 CFK40_10075 CFK40_10185 SM00849 Metallo-beta-lactamase superfamily CFK40_10205 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_10250 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_10470 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_10500 SM00478 endonuclease III CFK40_10505 SM00342 helix_turn_helix, arabinose operon control protein CFK40_10540 SM01059 Chloramphenicol acetyltransferase CFK40_10600 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_10630 SM00014 Acid phosphatase homologues CFK40_10635 SM00382 ATPases associated with a variety of cellular activities CFK40_10650 SM00855 Phosphoglycerate mutase family CFK40_10675 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_10715 SM00530 Helix-turn-helix XRE-family like proteins CFK40_10780 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CFK40_10785 SM00936 Penicillin-binding protein 5, C-terminal domain CFK40_10795 SM00387 Histidine kinase-like ATPases CFK40_10865 SM00363 S4 RNA-binding domain CFK40_10885 SM00448 cheY-homologous receiver domain CFK40_10885 SM00862 Transcriptional regulatory protein, C terminal CFK40_10890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_10890 SM00387 Histidine kinase-like ATPases CFK40_10890 SM00388 His Kinase A (phosphoacceptor) domain CFK40_10915 SM00487 DEAD-like helicases superfamily CFK40_10915 SM00490 helicase superfamily c-terminal domain CFK40_10955 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_10965 SM00870 CFK40_10965 CFK40_10995 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_11035 SM00411 bacterial (prokaryotic) histone like domain CFK40_11060 SM00562 CFK40_11060 CFK40_11080 SM00028 Tetratricopeptide repeats CFK40_11085 SM00914 CFK40_11085 CFK40_11135 SM00851 MGS-like domain CFK40_11170 SM00479 CFK40_11170 CFK40_11170 SM00491 CFK40_11170 CFK40_11200 SM00478 endonuclease III CFK40_11200 SM00525 CFK40_11200 CFK40_11205 SM00060 Fibronectin type 3 domain CFK40_11245 SM00981 CFK40_11245 CFK40_11295 SM00357 Cold shock protein domain CFK40_11305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_11370 SM00855 Phosphoglycerate mutase family CFK40_11375 SM00257 Lysin motif CFK40_11375 SM00631 CFK40_11375 CFK40_11425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_11450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_11465 SM00518 AP endonuclease family 2 CFK40_11470 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CFK40_11470 SM01232 CFK40_11470 CFK40_11495 SM00382 ATPases associated with a variety of cellular activities CFK40_11510 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CFK40_11510 SM00475 5'-3' exonuclease CFK40_11520 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_11525 SM00903 Flavin reductase like domain CFK40_11550 SM00878 Biotin carboxylase C-terminal domain CFK40_11570 SM00434 DNA Topoisomerase IV CFK40_11575 SM00387 Histidine kinase-like ATPases CFK40_11575 SM00433 TopoisomeraseII CFK40_11580 SM00881 CoA binding domain CFK40_11590 SM00382 ATPases associated with a variety of cellular activities CFK40_11595 SM01207 CFK40_11595 CFK40_11605 SM01234 CFK40_11605 CFK40_11640 SM00091 PAS domain CFK40_11640 SM00387 Histidine kinase-like ATPases CFK40_11640 SM00388 His Kinase A (phosphoacceptor) domain CFK40_11675 SM00861 Transketolase, pyrimidine binding domain CFK40_11685 SM00857 Resolvase, N terminal domain CFK40_11755 SM00857 Resolvase, N terminal domain CFK40_11785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_11830 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_11830 SM00866 CFK40_11830 CFK40_11850 SM01230 CFK40_11850 CFK40_11855 SM00422 helix_turn_helix, mercury resistance CFK40_11870 SM00382 ATPases associated with a variety of cellular activities CFK40_11885 SM00853 MutL C terminal dimerisation domain CFK40_11885 SM01340 CFK40_11885 CFK40_11890 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CFK40_11890 SM00534 ATPase domain of DNA mismatch repair MUTS family CFK40_11905 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_11920 SM00322 K homology RNA-binding domain CFK40_11920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_11925 SM00382 ATPases associated with a variety of cellular activities CFK40_11930 SM00852 Probable molybdopterin binding domain CFK40_11980 SM00382 ATPases associated with a variety of cellular activities CFK40_11990 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_11990 SM00866 CFK40_11990 CFK40_11995 SM00382 ATPases associated with a variety of cellular activities CFK40_11995 SM00843 CFK40_11995 CFK40_12010 SM01130 CFK40_12010 CFK40_12025 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CFK40_12045 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_12045 SM00322 K homology RNA-binding domain CFK40_12050 SM01387 CFK40_12050 CFK40_12055 SM00904 Riboflavin kinase CFK40_12090 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_12090 SM00322 K homology RNA-binding domain CFK40_12100 SM00479 CFK40_12100 CFK40_12100 SM00481 DNA polymerase alpha chain like domain CFK40_12105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_12155 SM00073 Histidine Phosphotransfer domain CFK40_12155 SM00387 Histidine kinase-like ATPases CFK40_12155 SM01231 CFK40_12155 CFK40_12165 SM00382 ATPases associated with a variety of cellular activities CFK40_12165 SM00962 SRP54-type protein, GTPase domain CFK40_12200 SM00448 cheY-homologous receiver domain CFK40_12255 SM00382 ATPases associated with a variety of cellular activities CFK40_12295 SM00382 ATPases associated with a variety of cellular activities CFK40_12295 SM01086 C-terminal, D2-small domain, of ClpB protein CFK40_12315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFK40_12315 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFK40_12315 SM00493 CFK40_12315 CFK40_12325 SM00881 CoA binding domain CFK40_12390 SM00382 ATPases associated with a variety of cellular activities CFK40_12390 SM00962 SRP54-type protein, GTPase domain CFK40_12390 SM00963 SRP54-type protein, helical bundle domain CFK40_12400 SM00382 ATPases associated with a variety of cellular activities CFK40_12400 SM00962 SRP54-type protein, GTPase domain CFK40_12400 SM00963 SRP54-type protein, helical bundle domain CFK40_12405 SM00968 SMC proteins Flexible Hinge Domain CFK40_12415 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_12435 SM01006 Siderophore biosynthesis protein domain CFK40_12515 SM00358 Double-stranded RNA binding motif CFK40_12515 SM00535 Ribonuclease III family CFK40_12525 SM00822 CFK40_12525 CFK40_12530 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CFK40_12545 SM00487 DEAD-like helicases superfamily CFK40_12545 SM00490 helicase superfamily c-terminal domain CFK40_12635 SM00450 Rhodanese Homology Domain CFK40_12635 SM00849 Metallo-beta-lactamase superfamily CFK40_12655 SM01060 CFK40_12655 CFK40_12675 SM00257 Lysin motif CFK40_12700 SM01120 CFK40_12700 CFK40_12700 SM01121 CFK40_12700 CFK40_12720 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CFK40_12735 SM00220 Serine/Threonine protein kinases, catalytic domain CFK40_12735 SM00740 CFK40_12735 CFK40_12740 SM00331 Sigma factor PP2C-like phosphatases CFK40_12740 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFK40_12755 SM00487 DEAD-like helicases superfamily CFK40_12755 SM00490 helicase superfamily c-terminal domain CFK40_12765 SM01409 CFK40_12765 CFK40_12775 SM00831 Cation transporter/ATPase, N-terminus CFK40_12805 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_12820 SM00851 MGS-like domain CFK40_12820 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFK40_12825 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CFK40_12845 SM00363 S4 RNA-binding domain CFK40_12865 SM00363 S4 RNA-binding domain CFK40_12910 SM00864 Tubulin/FtsZ family, GTPase domain CFK40_12910 SM00865 Tubulin/FtsZ family, C-terminal domain CFK40_12915 SM00842 Cell division protein FtsA CFK40_12950 SM00740 CFK40_12950 CFK40_12955 SM00740 CFK40_12955 CFK40_13020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_13125 SM00878 Biotin carboxylase C-terminal domain CFK40_13220 SM00861 Transketolase, pyrimidine binding domain CFK40_13245 SM00849 Metallo-beta-lactamase superfamily CFK40_13265 SM00382 ATPases associated with a variety of cellular activities CFK40_13270 SM00382 ATPases associated with a variety of cellular activities CFK40_13370 SM00052 Putative diguanylate phosphodiesterase CFK40_13370 SM00267 diguanylate cyclase CFK40_13385 SM00852 Probable molybdopterin binding domain CFK40_13430 SM00318 Staphylococcal nuclease homologues CFK40_13450 SM00829 Enoylreductase CFK40_13475 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CFK40_13475 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFK40_13480 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_13510 SM00867 YceI-like domain CFK40_13550 SM00478 endonuclease III CFK40_13590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CFK40_13590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CFK40_13590 SM00493 CFK40_13590 CFK40_13605 SM00382 ATPases associated with a variety of cellular activities CFK40_13640 SM00382 ATPases associated with a variety of cellular activities CFK40_13685 SM00530 Helix-turn-helix XRE-family like proteins CFK40_13750 SM00487 DEAD-like helicases superfamily CFK40_13750 SM00490 helicase superfamily c-terminal domain CFK40_13865 SM01329 CFK40_13865 CFK40_13870 SM00917 LeuA allosteric (dimerisation) domain CFK40_13945 SM00244 prohibitin homologues CFK40_13950 SM00903 Flavin reductase like domain CFK40_13965 SM00382 ATPases associated with a variety of cellular activities CFK40_13970 SM00382 ATPases associated with a variety of cellular activities CFK40_13990 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_14025 SM01119 CFK40_14025 CFK40_14070 SM00830 Chorismate mutase type II CFK40_14085 SM00859 Semialdehyde dehydrogenase, NAD binding domain CFK40_14090 SM01130 CFK40_14090 CFK40_14185 SM00382 ATPases associated with a variety of cellular activities CFK40_14305 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_14305 SM00866 CFK40_14305 CFK40_14330 SM00822 CFK40_14330 CFK40_14365 SM00091 PAS domain CFK40_14365 SM00382 ATPases associated with a variety of cellular activities CFK40_14400 SM00487 DEAD-like helicases superfamily CFK40_14400 SM00490 helicase superfamily c-terminal domain CFK40_14440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_14460 SM01350 CFK40_14460 CFK40_14480 SM00091 PAS domain CFK40_14480 SM00382 ATPases associated with a variety of cellular activities CFK40_14495 SM00346 helix_turn_helix isocitrate lyase regulation CFK40_14540 SM01130 CFK40_14540 CFK40_14595 SM00881 CoA binding domain CFK40_14660 SM01240 CFK40_14660 CFK40_14765 SM00382 ATPases associated with a variety of cellular activities CFK40_14775 SM00327 von Willebrand factor (vWF) type A domain CFK40_14780 SM00919 Malic enzyme, NAD binding domain CFK40_14780 SM01274 CFK40_14780 CFK40_14790 SM00854 Bacterial capsule synthesis protein PGA_cap CFK40_14885 SM00382 ATPases associated with a variety of cellular activities CFK40_14890 SM00382 ATPases associated with a variety of cellular activities CFK40_14900 SM00342 helix_turn_helix, arabinose operon control protein CFK40_14900 SM00448 cheY-homologous receiver domain CFK40_14930 SM00091 PAS domain CFK40_14930 SM00382 ATPases associated with a variety of cellular activities CFK40_14975 SM00091 PAS domain CFK40_14975 SM00382 ATPases associated with a variety of cellular activities CFK40_14995 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_15040 SM01217 CFK40_15040 CFK40_15065 SM00354 helix_turn _helix lactose operon repressor CFK40_15180 SM01130 CFK40_15180 CFK40_15185 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_15185 SM00895 CFK40_15185 CFK40_15235 SM01329 CFK40_15235 CFK40_15255 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_15280 SM01038 Beta galactosidase small chain CFK40_15340 SM00422 helix_turn_helix, mercury resistance CFK40_15405 SM00327 von Willebrand factor (vWF) type A domain CFK40_15410 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CFK40_15435 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_15435 SM00382 ATPases associated with a variety of cellular activities CFK40_15440 SM00382 ATPases associated with a variety of cellular activities CFK40_15480 SM00382 ATPases associated with a variety of cellular activities CFK40_15485 SM00382 ATPases associated with a variety of cellular activities CFK40_15520 SM00849 Metallo-beta-lactamase superfamily CFK40_15530 SM00857 Resolvase, N terminal domain CFK40_15555 SM00487 DEAD-like helicases superfamily CFK40_15625 SM00382 ATPases associated with a variety of cellular activities CFK40_15630 SM00382 ATPases associated with a variety of cellular activities CFK40_15655 SM01007 Class II Aldolase and Adducin N-terminal domain CFK40_15665 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_15665 SM00866 CFK40_15665 CFK40_15840 SM00342 helix_turn_helix, arabinose operon control protein CFK40_15860 SM00530 Helix-turn-helix XRE-family like proteins CFK40_15955 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CFK40_15960 SM00382 ATPases associated with a variety of cellular activities CFK40_16010 SM01058 CarD-like/TRCF domain CFK40_16015 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_16055 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_16080 SM00903 Flavin reductase like domain CFK40_16120 SM00382 ATPases associated with a variety of cellular activities CFK40_16125 SM00382 ATPases associated with a variety of cellular activities CFK40_16150 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_16185 SM00422 helix_turn_helix, mercury resistance CFK40_16190 SM01091 Transporter associated domain CFK40_16255 SM00938 Nitrogen regulatory protein P-II CFK40_16380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_16415 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_16430 SM01207 CFK40_16430 CFK40_16455 SM00849 Metallo-beta-lactamase superfamily CFK40_16500 SM00382 ATPases associated with a variety of cellular activities CFK40_16505 SM00382 ATPases associated with a variety of cellular activities CFK40_16510 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_16510 SM00924 MgtE intracellular N domain CFK40_16535 SM00954 Region found in RelA / SpoT proteins CFK40_16540 SM01118 CFK40_16540 CFK40_16590 SM00797 Allophanate hydrolase subunit 2 CFK40_16595 SM00796 Allophanate hydrolase subunit 1 CFK40_16635 SM00825 Beta-ketoacyl synthase CFK40_16710 SM00932 Scaffold protein Nfu/NifU N terminal CFK40_16725 SM00642 Alpha-amylase domain CFK40_16845 SM00849 Metallo-beta-lactamase superfamily CFK40_16895 SM00421 helix_turn_helix, Lux Regulon CFK40_16895 SM00448 cheY-homologous receiver domain CFK40_16900 SM00387 Histidine kinase-like ATPases CFK40_16935 SM00382 ATPases associated with a variety of cellular activities CFK40_16975 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_16975 SM00382 ATPases associated with a variety of cellular activities CFK40_17010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_17035 SM00382 ATPases associated with a variety of cellular activities CFK40_17060 SM00382 ATPases associated with a variety of cellular activities CFK40_17085 SM00914 CFK40_17085 CFK40_17185 SM00382 ATPases associated with a variety of cellular activities CFK40_17190 SM00382 ATPases associated with a variety of cellular activities CFK40_17225 SM00116 Domain in cystathionine beta-synthase and other proteins. CFK40_17225 SM00382 ATPases associated with a variety of cellular activities CFK40_17240 SM00347 helix_turn_helix multiple antibiotic resistance protein CFK40_17290 SM00861 Transketolase, pyrimidine binding domain CFK40_17310 SM00567 E-Z type HEAT repeats CFK40_17355 SM00382 ATPases associated with a variety of cellular activities CFK40_17365 SM00421 helix_turn_helix, Lux Regulon CFK40_17365 SM00448 cheY-homologous receiver domain CFK40_17385 SM00829 Enoylreductase CFK40_17390 SM00986 Uracil DNA glycosylase superfamily CFK40_17390 SM00987 UreE urease accessory protein, C-terminal domain CFK40_17440 SM00382 ATPases associated with a variety of cellular activities CFK40_17455 SM00354 helix_turn _helix lactose operon repressor CFK40_17470 SM00382 ATPases associated with a variety of cellular activities CFK40_17475 SM00382 ATPases associated with a variety of cellular activities CFK40_17500 SM00479 CFK40_17500 CFK40_17515 SM01329 CFK40_17515 CFK40_17525 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_17525 SM00895 CFK40_17525 CFK40_17575 SM00342 helix_turn_helix, arabinose operon control protein CFK40_17575 SM00448 cheY-homologous receiver domain CFK40_17580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_17590 SM01007 Class II Aldolase and Adducin N-terminal domain CFK40_17600 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_17655 SM00342 helix_turn_helix, arabinose operon control protein CFK40_17745 SM00642 Alpha-amylase domain CFK40_17750 SM00642 Alpha-amylase domain CFK40_17755 SM00829 Enoylreductase CFK40_17760 SM00849 Metallo-beta-lactamase superfamily CFK40_17935 SM00448 cheY-homologous receiver domain CFK40_17935 SM00850 LytTr DNA-binding domain CFK40_17940 SM00387 Histidine kinase-like ATPases CFK40_17945 SM00072 Guanylate kinase homologues. CFK40_17955 SM00342 helix_turn_helix, arabinose operon control protein CFK40_18005 SM00382 ATPases associated with a variety of cellular activities CFK40_18010 SM00966 SpoVT / AbrB like domain CFK40_18025 SM00382 ATPases associated with a variety of cellular activities CFK40_18055 SM00450 Rhodanese Homology Domain CFK40_18065 SM00357 Cold shock protein domain CFK40_18140 SM00344 helix_turn_helix ASNC type CFK40_18155 SM01131 CFK40_18155 CFK40_18215 SM00849 Metallo-beta-lactamase superfamily CFK40_18220 SM00829 Enoylreductase CFK40_18240 SM00354 helix_turn _helix lactose operon repressor CFK40_18265 SM00849 Metallo-beta-lactamase superfamily CFK40_18325 SM00893 Electron transfer flavoprotein domain CFK40_18330 SM00893 Electron transfer flavoprotein domain CFK40_18335 SM00091 PAS domain CFK40_18335 SM00382 ATPases associated with a variety of cellular activities CFK40_18370 SM00507 HNH nucleases CFK40_18375 SM00530 Helix-turn-helix XRE-family like proteins CFK40_18395 SM00271 DnaJ molecular chaperone homology domain CFK40_18565 SM00448 cheY-homologous receiver domain CFK40_18565 SM00862 Transcriptional regulatory protein, C terminal CFK40_18570 SM00387 Histidine kinase-like ATPases CFK40_18575 SM00382 ATPases associated with a variety of cellular activities CFK40_18590 SM00382 ATPases associated with a variety of cellular activities CFK40_18605 SM00478 endonuclease III CFK40_18605 SM00525 CFK40_18605 CFK40_18650 SM00382 ATPases associated with a variety of cellular activities CFK40_18655 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_18660 SM00849 Metallo-beta-lactamase superfamily CFK40_18665 SM00382 ATPases associated with a variety of cellular activities CFK40_18665 SM01086 C-terminal, D2-small domain, of ClpB protein CFK40_18680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_18680 SM00387 Histidine kinase-like ATPases CFK40_18680 SM00388 His Kinase A (phosphoacceptor) domain CFK40_18685 SM00448 cheY-homologous receiver domain CFK40_18685 SM00862 Transcriptional regulatory protein, C terminal CFK40_18730 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_18765 SM00563 Phosphate acyltransferases CFK40_18800 SM00346 helix_turn_helix isocitrate lyase regulation CFK40_18880 SM00382 ATPases associated with a variety of cellular activities CFK40_18950 SM00491 CFK40_18950 CFK40_18970 SM00382 ATPases associated with a variety of cellular activities CFK40_18975 SM00382 ATPases associated with a variety of cellular activities CFK40_19010 SM00988 UreE urease accessory protein, N-terminal domain CFK40_19095 SM00363 S4 RNA-binding domain CFK40_19110 SM00947 Carbonic anhydrase CFK40_19120 SM00098 Alkaline phosphatase homologues CFK40_19215 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFK40_19220 SM00845 GatB domain CFK40_19235 SM00028 Tetratricopeptide repeats CFK40_19235 SM00530 Helix-turn-helix XRE-family like proteins CFK40_19250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CFK40_19250 SM00292 breast cancer carboxy-terminal domain CFK40_19250 SM00532 Ligase N family CFK40_19280 SM01209 CFK40_19280 CFK40_19280 SM01210 CFK40_19280 CFK40_19285 SM00798 AICARFT/IMPCHase bienzyme CFK40_19285 SM00851 MGS-like domain CFK40_19310 SM01211 CFK40_19310 CFK40_19325 SM00998 Adenylosuccinate lyase C-terminus CFK40_19335 SM01001 AIR carboxylase CFK40_19380 SM00460 Transglutaminase/protease-like homologues CFK40_19460 SM00382 ATPases associated with a variety of cellular activities CFK40_19470 SM00481 DNA polymerase alpha chain like domain CFK40_19475 SM00382 ATPases associated with a variety of cellular activities CFK40_19485 SM00382 ATPases associated with a variety of cellular activities CFK40_19510 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_19510 SM00866 CFK40_19510 CFK40_19555 SM00530 Helix-turn-helix XRE-family like proteins CFK40_19570 SM00883 Chaperonin 10 Kd subunit CFK40_19595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_19610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CFK40_19640 SM00881 CoA binding domain CFK40_19650 SM00382 ATPases associated with a variety of cellular activities CFK40_19765 SM00731 SprT homologues. CFK40_19770 SM01060 CFK40_19770 CFK40_19775 SM00316 Ribosomal protein S1-like RNA-binding domain CFK40_19775 SM00732 Likely ribonuclease with RNase H fold. CFK40_19780 SM00331 Sigma factor PP2C-like phosphatases CFK40_19800 SM00331 Sigma factor PP2C-like phosphatases CFK40_19800 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CFK40_19805 SM00387 Histidine kinase-like ATPases CFK40_19830 SM01005 Alanine racemase, C-terminal domain CFK40_19875 SM00487 DEAD-like helicases superfamily CFK40_19875 SM00490 helicase superfamily c-terminal domain CFK40_19910 SM00382 ATPases associated with a variety of cellular activities CFK40_19935 SM00046 Diacylglycerol kinase catalytic domain (presumed) CFK40_19940 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_19945 SM00382 ATPases associated with a variety of cellular activities CFK40_19970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CFK40_19970 SM00387 Histidine kinase-like ATPases CFK40_19970 SM00388 His Kinase A (phosphoacceptor) domain CFK40_19975 SM00448 cheY-homologous receiver domain CFK40_19975 SM00862 Transcriptional regulatory protein, C terminal CFK40_20005 SM00854 Bacterial capsule synthesis protein PGA_cap CFK40_20035 SM00382 ATPases associated with a variety of cellular activities CFK40_20050 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_20050 SM00866 CFK40_20050 CFK40_20055 SM00642 Alpha-amylase domain CFK40_20075 SM00382 ATPases associated with a variety of cellular activities CFK40_20095 SM00838 Elongation factor G C-terminus CFK40_20100 SM00387 Histidine kinase-like ATPases CFK40_20100 SM00388 His Kinase A (phosphoacceptor) domain CFK40_20105 SM00448 cheY-homologous receiver domain CFK40_20105 SM00862 Transcriptional regulatory protein, C terminal CFK40_20110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CFK40_20125 SM00382 ATPases associated with a variety of cellular activities CFK40_20170 SM00357 Cold shock protein domain CFK40_20190 SM00450 Rhodanese Homology Domain CFK40_20220 SM00946 Prolyl-tRNA synthetase, C-terminal CFK40_20245 SM01207 CFK40_20245 CFK40_20275 SM00062 Bacterial periplasmic substrate-binding proteins CFK40_20290 SM00382 ATPases associated with a variety of cellular activities CFK40_20310 SM00481 DNA polymerase alpha chain like domain CFK40_20370 SM00849 Metallo-beta-lactamase superfamily CFK40_20385 SM01240 CFK40_20385 CFK40_20410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_20425 SM00382 ATPases associated with a variety of cellular activities CFK40_20450 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_20450 SM00876 Biotin and Thiamin Synthesis associated domain CFK40_20460 SM00450 Rhodanese Homology Domain CFK40_20485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CFK40_20490 SM00420 helix_turn_helix, Deoxyribose operon repressor CFK40_20490 SM01134 CFK40_20490 CFK40_20510 SM00382 ATPases associated with a variety of cellular activities CFK40_20595 SM00729 Elongator protein 3, MiaB family, Radical SAM CFK40_20610 SM01022 CFK40_20610 CFK40_20635 SM00382 ATPases associated with a variety of cellular activities CFK40_20640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CFK40_20665 SM00849 Metallo-beta-lactamase superfamily