locus-tag class description X953_00005 PF00712 DNA polymerase III beta subunit, N-terminal domain X953_00005 PF02767 DNA polymerase III beta subunit, central domain X953_00005 PF02768 DNA polymerase III beta subunit, C-terminal domain X953_00015 PF02463 RecF/RecN/SMC N terminal domain X953_00020 PF04025 Domain of unknown function (DUF370) X953_00025 PF01751 Toprim domain X953_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_00025 PF00986 DNA gyrase B subunit, carboxyl terminus X953_00025 PF00204 DNA gyrase B X953_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller X953_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A X953_00035 PF01966 HD domain X953_00040 PF14175 YaaC-like Protein X953_00050 PF00478 IMP dehydrogenase / GMP reductase domain X953_00050 PF00571 CBS domain X953_00055 PF00768 D-alanyl-D-alanine carboxypeptidase X953_00055 PF07943 Penicillin-binding protein 5, C-terminal domain X953_00060 PF01680 SOR/SNZ family X953_00065 PF01174 SNO glutamine amidotransferase family X953_00070 PF02403 Seryl-tRNA synthetase N-terminal domain X953_00070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X953_00080 PF09383 NIL domain X953_00080 PF00005 ABC transporter X953_00085 PF00528 Binding-protein-dependent transport system inner membrane component X953_00090 PF03180 NLPA lipoprotein X953_00110 PF04607 Region found in RelA / SpoT proteins X953_00115 PF14748 Pyrroline-5-carboxylate reductase dimerisation X953_00115 PF03807 NADP oxidoreductase coenzyme F420-dependent X953_00120 PF02416 mttA/Hcf106 family X953_00125 PF01712 Deoxynucleoside kinase X953_00130 PF01712 Deoxynucleoside kinase X953_00140 PF00375 Sodium:dicarboxylate symporter family X953_00150 PF00501 AMP-binding enzyme X953_00150 PF13193 AMP-binding enzyme C-terminal domain X953_00155 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal X953_00155 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal X953_00160 PF00175 Oxidoreductase NAD-binding domain X953_00160 PF00042 Globin X953_00160 PF00970 Oxidoreductase FAD-binding domain X953_00165 PF02082 Transcriptional regulator X953_00170 PF01965 DJ-1/PfpI family X953_00175 PF01476 LysM domain X953_00175 PF00704 Glycosyl hydrolases family 18 X953_00180 PF00857 Isochorismatase family X953_00185 PF14437 MafB19-like deaminase X953_00195 PF12169 DNA polymerase III subunits gamma and tau domain III X953_00200 PF02575 YbaB/EbfC DNA-binding family X953_00205 PF02132 RecR protein X953_00205 PF13662 Toprim domain X953_00220 PF10764 Inhibitor of sigma-G Gin X953_00225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain X953_00225 PF01276 Orn/Lys/Arg decarboxylase, major domain X953_00230 PF02223 Thymidylate kinase X953_00235 PF06153 Cyclic-di-AMP receptor X953_00240 PF03885 Protein of unknown function (DUF327) X953_00245 PF09115 DNA polymerase III, delta subunit, C terminal X953_00250 PF04468 PSP1 C-terminal conserved region X953_00255 PF06156 Initiation control protein YabA X953_00260 PF05175 Methyltransferase small domain X953_00265 PF01541 GIY-YIG catalytic domain X953_00270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X953_00280 PF18277 AbrB C-terminal domain X953_00280 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin X953_00285 PF08264 Anticodon-binding domain of tRNA X953_00285 PF09334 tRNA synthetases class I (M) X953_00285 PF01588 Putative tRNA binding domain X953_00290 PF01026 TatD related DNase X953_00295 PF07501 G5 domain X953_00295 PF06725 3D domain X953_00295 PF03990 G5-linked-Ubiquitin-like domain X953_00305 PF13662 Toprim domain X953_00305 PF13331 Domain of unknown function (DUF4093) X953_00310 PF00398 Ribosomal RNA adenine dimethylase X953_00315 PF05582 YabG peptidase U57 X953_00320 PF06257 Biofilm formation stimulator VEG X953_00325 PF00269 Small, acid-soluble spore proteins, alpha/beta type X953_00330 PF08544 GHMP kinases C terminal X953_00330 PF00288 GHMP kinases N terminal domain X953_00335 PF00156 Phosphoribosyl transferase domain X953_00335 PF09182 Bacterial purine repressor, N-terminal X953_00340 PF04026 SpoVG X953_00345 PF00483 Nucleotidyl transferase X953_00345 PF00132 Bacterial transferase hexapeptide (six repeats) X953_00345 PF14602 Hexapeptide repeat of succinyl-transferase X953_00350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase X953_00350 PF14572 Phosphoribosyl synthetase-associated domain X953_00355 PF14693 Ribosomal protein TL5, C-terminal domain X953_00355 PF01386 Ribosomal L25p family X953_00360 PF01195 Peptidyl-tRNA hydrolase X953_00370 PF02559 CarD-like/TRCF domain X953_00370 PF00270 DEAD/DEAH box helicase X953_00370 PF00271 Helicase conserved C-terminal domain X953_00370 PF03461 TRCF domain X953_00370 PF17757 UvrB interaction domain X953_00375 PF15714 Stage V sporulation protein T C-terminal, transcription factor X953_00375 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin X953_00380 PF01943 Polysaccharide biosynthesis protein X953_00380 PF14667 Polysaccharide biosynthesis C-terminal domain X953_00385 PF03819 MazG nucleotide pyrophosphohydrolase domain X953_00385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X953_00390 PF01479 S4 domain X953_00395 PF00183 Hsp90 protein X953_00400 PF07873 YabP family X953_00415 PF00575 S1 RNA binding domain X953_00425 PF07228 Stage II sporulation protein E (SpoIIE) X953_00430 PF00092 von Willebrand factor type A domain X953_00435 PF00069 Protein kinase domain X953_00440 PF01171 PP-loop family X953_00440 PF11734 TilS substrate C-terminal domain X953_00450 PF00004 ATPase family associated with various cellular activities (AAA) X953_00450 PF06480 FtsH Extracellular X953_00450 PF01434 Peptidase family M41 X953_00450 PF17862 AAA+ lid domain X953_00460 PF03309 Type III pantothenate kinase X953_00465 PF01430 Hsp33 protein X953_00470 PF13145 PPIC-type PPIASE domain X953_00480 PF00291 Pyridoxal-phosphate dependent enzyme X953_00490 PF00809 Pterin binding enzyme X953_00495 PF02152 Dihydroneopterin aldolase X953_00500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) X953_00505 PF01381 Helix-turn-helix X953_00510 PF01336 OB-fold nucleic acid binding domain X953_00510 PF00152 tRNA synthetases class II (D, K and N) X953_00530 PF02308 MgtC family X953_00535 PF17727 CtsR C-terminal dimerization domain X953_00535 PF05848 CtsR N-terminal HTH domain X953_00540 PF02151 UvrB/uvrC motif X953_00545 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain X953_00550 PF00004 ATPase family associated with various cellular activities (AAA) X953_00550 PF10431 C-terminal, D2-small domain, of ClpB protein X953_00550 PF02861 Clp amino terminal domain, pathogenicity island component X953_00550 PF07724 AAA domain (Cdc48 subfamily) X953_00550 PF17871 AAA lid domain X953_00560 PF18073 Rubredoxin metal binding domain X953_00570 PF00749 tRNA synthetases class I (E and Q), catalytic domain X953_00575 PF00132 Bacterial transferase hexapeptide (six repeats) X953_00575 PF06426 Serine acetyltransferase, N-terminal X953_00580 PF01406 tRNA synthetases class I (C) catalytic domain X953_00580 PF09190 DALR domain X953_00585 PF00636 Ribonuclease III domain X953_00590 PF08032 RNA 2'-O ribose methyltransferase substrate binding X953_00590 PF00588 SpoU rRNA Methylase family X953_00595 PF05991 YacP-like NYN domain X953_00600 PF08281 Sigma-70, region 4 X953_00600 PF04542 Sigma-70 region 2 X953_00605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex X953_00610 PF02357 Transcription termination factor nusG X953_00610 PF00467 KOW motif X953_00615 PF03946 Ribosomal protein L11, N-terminal domain X953_00615 PF00298 Ribosomal protein L11, RNA binding domain X953_00620 PF00687 Ribosomal protein L1p/L10e family X953_00625 PF00466 Ribosomal protein L10 X953_00635 PF05175 Methyltransferase small domain X953_00640 PF04563 RNA polymerase beta subunit X953_00640 PF04561 RNA polymerase Rpb2, domain 2 X953_00640 PF04565 RNA polymerase Rpb2, domain 3 X953_00640 PF10385 RNA polymerase beta subunit external 1 domain X953_00640 PF00562 RNA polymerase Rpb2, domain 6 X953_00640 PF04560 RNA polymerase Rpb2, domain 7 X953_00645 PF00623 RNA polymerase Rpb1, domain 2 X953_00645 PF05000 RNA polymerase Rpb1, domain 4 X953_00645 PF04997 RNA polymerase Rpb1, domain 1 X953_00645 PF04983 RNA polymerase Rpb1, domain 3 X953_00645 PF04998 RNA polymerase Rpb1, domain 5 X953_00650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family X953_00655 PF00164 Ribosomal protein S12/S23 X953_00660 PF00177 Ribosomal protein S7p/S5e X953_00665 PF14492 Elongation Factor G, domain II X953_00665 PF00679 Elongation factor G C-terminus X953_00665 PF00009 Elongation factor Tu GTP binding domain X953_00665 PF03144 Elongation factor Tu domain 2 X953_00665 PF03764 Elongation factor G, domain IV X953_00670 PF03143 Elongation factor Tu C-terminal domain X953_00670 PF03144 Elongation factor Tu domain 2 X953_00670 PF00009 Elongation factor Tu GTP binding domain X953_00675 PF00338 Ribosomal protein S10p/S20e X953_00680 PF00297 Ribosomal protein L3 X953_00685 PF00573 Ribosomal protein L4/L1 family X953_00690 PF00276 Ribosomal protein L23 X953_00695 PF00181 Ribosomal Proteins L2, RNA binding domain X953_00695 PF03947 Ribosomal Proteins L2, C-terminal domain X953_00700 PF00203 Ribosomal protein S19 X953_00705 PF00237 Ribosomal protein L22p/L17e X953_00710 PF00189 Ribosomal protein S3, C-terminal domain X953_00710 PF07650 KH domain X953_00715 PF00252 Ribosomal protein L16p/L10e X953_00720 PF00831 Ribosomal L29 protein X953_00725 PF00366 Ribosomal protein S17 X953_00730 PF00238 Ribosomal protein L14p/L23e X953_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 X953_00735 PF00467 KOW motif X953_00740 PF00281 Ribosomal protein L5 X953_00740 PF00673 ribosomal L5P family C-terminus X953_00745 PF00253 Ribosomal protein S14p/S29e X953_00750 PF00410 Ribosomal protein S8 X953_00755 PF00347 Ribosomal protein L6 X953_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast X953_00765 PF00333 Ribosomal protein S5, N-terminal domain X953_00765 PF03719 Ribosomal protein S5, C-terminal domain X953_00770 PF00327 Ribosomal protein L30p/L7e X953_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A X953_00780 PF00344 SecY translocase X953_00785 PF05191 Adenylate kinase, active site lid X953_00795 PF01176 Translation initiation factor 1A / IF-1 X953_00800 PF00444 Ribosomal protein L36 X953_00805 PF00416 Ribosomal protein S13/S18 X953_00810 PF00411 Ribosomal protein S11 X953_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain X953_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain X953_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain X953_00820 PF01196 Ribosomal protein L17 X953_00830 PF00005 ABC transporter X953_00835 PF00005 ABC transporter X953_00845 PF01416 tRNA pseudouridine synthase X953_00850 PF00572 Ribosomal protein L13 X953_00855 PF00380 Ribosomal protein S9/S16 X953_00955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_00955 PF00205 Thiamine pyrophosphate enzyme, central domain X953_00955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_00960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_00960 PF00205 Thiamine pyrophosphate enzyme, central domain X953_00960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_00965 PF04172 LrgB-like family X953_00970 PF03788 LrgA family X953_00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_00975 PF03466 LysR substrate binding domain X953_00980 PF01751 Toprim domain X953_00980 PF01131 DNA topoisomerase X953_01020 PF03176 MMPL family X953_01025 PF07728 AAA domain (dynein-related subfamily) X953_01030 PF00092 von Willebrand factor type A domain X953_01050 PF13533 Biotin-lipoyl like X953_01055 PF03631 Virulence factor BrkB X953_01080 PF01520 N-acetylmuramoyl-L-alanine amidase X953_01085 PF10609 NUBPL iron-transfer P-loop NTPase X953_01090 PF17898 Spore germination GerD central core domain X953_01095 PF14089 KinB-signalling pathway activation in sporulation X953_01100 PF01522 Polysaccharide deacetylase X953_01155 PF00293 NUDIX domain X953_01165 PF01872 RibD C-terminal domain X953_01170 PF07885 Ion channel X953_01220 PF00368 Hydroxymethylglutaryl-coenzyme A reductase X953_01225 PF00288 GHMP kinases N terminal domain X953_01225 PF10509 Galactokinase galactose-binding signature X953_01225 PF08544 GHMP kinases C terminal X953_01235 PF00288 GHMP kinases N terminal domain X953_01235 PF08544 GHMP kinases C terminal X953_01240 PF00491 Arginase family X953_01250 PF04542 Sigma-70 region 2 X953_01250 PF08281 Sigma-70, region 4 X953_01255 PF13490 Putative zinc-finger X953_01260 PF02457 DisA bacterial checkpoint controller nucleotide-binding X953_01265 PF07949 YbbR-like protein X953_01270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II X953_01270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III X953_01270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain X953_01270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I X953_01275 PF00486 Transcriptional regulatory protein, C terminal X953_01275 PF00072 Response regulator receiver domain X953_01280 PF00672 HAMP domain X953_01280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_01280 PF00512 His Kinase A (phospho-acceptor) domain X953_01285 PF02687 FtsX-like permease family X953_01290 PF00005 ABC transporter X953_01305 PF11188 Protein of unknown function (DUF2975) X953_01310 PF00326 Prolyl oligopeptidase family X953_01315 PF01380 SIS domain X953_01355 PF12729 Four helix bundle sensory module for signal transduction X953_01355 PF00672 HAMP domain X953_01355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_01360 PF00563 EAL domain X953_01360 PF00990 Diguanylate cyclase, GGDEF domain X953_01360 PF03707 Bacterial signalling protein N terminal repeat X953_01365 PF13426 PAS domain X953_01365 PF08447 PAS fold X953_01365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_01370 PF00990 Diguanylate cyclase, GGDEF domain X953_01375 PF00672 HAMP domain X953_01375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_01375 PF12729 Four helix bundle sensory module for signal transduction X953_01395 PF01381 Helix-turn-helix X953_01430 PF08863 YolD-like protein X953_01435 PF09639 YjcQ protein X953_01460 PF02384 N-6 DNA Methylase X953_01525 PF11426 Tn7 transposition regulator TnsC X953_01525 PF13401 AAA domain X953_01535 PF07693 KAP family P-loop domain X953_01550 PF01026 TatD related DNase X953_01635 PF02909 Tetracyclin repressor-like, C-terminal domain X953_01635 PF00440 Bacterial regulatory proteins, tetR family X953_01655 PF00990 Diguanylate cyclase, GGDEF domain X953_01685 PF01381 Helix-turn-helix X953_01740 PF00589 Phage integrase family X953_01740 PF02899 Phage integrase, N-terminal SAM-like domain X953_01745 PF00589 Phage integrase family X953_01745 PF02899 Phage integrase, N-terminal SAM-like domain X953_01755 PF01022 Bacterial regulatory protein, arsR family X953_01760 PF00403 Heavy-metal-associated domain X953_01780 PF08863 YolD-like protein X953_01795 PF08463 EcoEI R protein C-terminal X953_01795 PF04851 Type III restriction enzyme, res subunit X953_01795 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) X953_01795 PF00271 Helicase conserved C-terminal domain X953_01805 PF02384 N-6 DNA Methylase X953_01805 PF12161 HsdM N-terminal domain X953_01810 PF01420 Type I restriction modification DNA specificity domain X953_01855 PF01695 IstB-like ATP binding protein X953_01865 PF02796 Helix-turn-helix domain of resolvase X953_01865 PF00239 Resolvase, N terminal domain X953_01870 PF08722 TnsA endonuclease N terminal X953_01870 PF08721 TnsA endonuclease C terminal X953_01875 PF00665 Integrase core domain X953_01880 PF13401 AAA domain X953_01880 PF11426 Tn7 transposition regulator TnsC X953_01910 PF00144 Beta-lactamase X953_01915 PF01904 Protein of unknown function DUF72 X953_01925 PF16326 ABC transporter C-terminal domain X953_01925 PF12848 ABC transporter X953_01925 PF00005 ABC transporter X953_01930 PF04134 Protein of unknown function, DUF393 X953_01945 PF00072 Response regulator receiver domain X953_01945 PF00990 Diguanylate cyclase, GGDEF domain X953_01955 PF01654 Cytochrome bd terminal oxidase subunit I X953_01960 PF02322 Cytochrome bd terminal oxidase subunit II X953_01965 PF00005 ABC transporter X953_01965 PF00664 ABC transporter transmembrane region X953_01970 PF00005 ABC transporter X953_01970 PF00664 ABC transporter transmembrane region X953_01980 PF17932 Tetracyclin repressor-like, C-terminal domain X953_01980 PF00440 Bacterial regulatory proteins, tetR family X953_01985 PF13732 Domain of unknown function (DUF4162) X953_01985 PF00005 ABC transporter X953_01995 PF12787 EcsC protein family X953_02010 PF01568 Molydopterin dinucleotide binding domain X953_02010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X953_02010 PF00384 Molybdopterin oxidoreductase X953_02040 PF07690 Major Facilitator Superfamily X953_02050 PF00072 Response regulator receiver domain X953_02050 PF00196 Bacterial regulatory proteins, luxR family X953_02060 PF07730 Histidine kinase X953_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_02070 PF00106 short chain dehydrogenase X953_02075 PF05525 Branched-chain amino acid transport protein X953_02080 PF00392 Bacterial regulatory proteins, gntR family X953_02080 PF07729 FCD domain X953_02085 PF00199 Catalase X953_02085 PF06628 Catalase-related immune-responsive X953_02095 PF00924 Mechanosensitive ion channel X953_02105 PF01699 Sodium/calcium exchanger protein X953_02115 PF13769 Virulence factor X953_02115 PF08712 Scaffold protein Nfu/NifU N terminal X953_02125 PF03061 Thioesterase superfamily X953_02130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 X953_02135 PF00067 Cytochrome P450 X953_02140 PF17785 PUA-like domain X953_02140 PF10672 S-adenosylmethionine-dependent methyltransferase X953_02145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain X953_02145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain X953_02155 PF00291 Pyridoxal-phosphate dependent enzyme X953_02160 PF00742 Homoserine dehydrogenase X953_02160 PF01842 ACT domain X953_02160 PF03447 Homoserine dehydrogenase, NAD binding domain X953_02175 PF02627 Carboxymuconolactone decarboxylase family X953_02180 PF07690 Major Facilitator Superfamily X953_02195 PF02028 BCCT, betaine/carnitine/choline family transporter X953_02220 PF00582 Universal stress protein family X953_02225 PF03601 Conserved hypothetical protein 698 X953_02230 PF03466 LysR substrate binding domain X953_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_02235 PF07739 TipAS antibiotic-recognition domain X953_02235 PF13411 MerR HTH family regulatory protein X953_02240 PF02581 Thiamine monophosphate synthase X953_02245 PF02110 Hydroxyethylthiazole kinase family X953_02250 PF08543 Phosphomethylpyrimidine kinase X953_02260 PF13823 Alcohol dehydrogenase GroES-associated X953_02260 PF08240 Alcohol dehydrogenase GroES-like domain X953_02260 PF00107 Zinc-binding dehydrogenase X953_02280 PF00474 Sodium:solute symporter family X953_02290 PF00501 AMP-binding enzyme X953_02290 PF13193 AMP-binding enzyme C-terminal domain X953_02300 PF02028 BCCT, betaine/carnitine/choline family transporter X953_02305 PF07997 Protein of unknown function (DUF1694) X953_02320 PF00330 Aconitase family (aconitate hydratase) X953_02330 PF07875 Coat F domain X953_02335 PF00753 Metallo-beta-lactamase superfamily X953_02345 PF03372 Endonuclease/Exonuclease/phosphatase family X953_02350 PF00392 Bacterial regulatory proteins, gntR family X953_02355 PF00005 ABC transporter X953_02370 PF00085 Thioredoxin X953_02390 PF04055 Radical SAM superfamily X953_02390 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family X953_02395 PF03099 Biotin/lipoate A/B protein ligase family X953_02405 PF00290 Tryptophan synthase alpha chain X953_02410 PF00291 Pyridoxal-phosphate dependent enzyme X953_02415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase X953_02420 PF00218 Indole-3-glycerol phosphate synthase X953_02425 PF02885 Glycosyl transferase family, helical bundle domain X953_02425 PF00591 Glycosyl transferase family, a/b domain X953_02430 PF00117 Glutamine amidotransferase class-I X953_02435 PF00425 chorismate binding enzyme X953_02435 PF04715 Anthranilate synthase component I, N terminal region X953_02445 PF01820 D-ala D-ala ligase N-terminus X953_02445 PF07478 D-ala D-ala ligase C-terminus X953_02450 PF01235 Sodium:alanine symporter family X953_02455 PF00881 Nitroreductase family X953_02475 PF01966 HD domain X953_02480 PF02557 D-alanyl-D-alanine carboxypeptidase X953_02485 PF07690 Major Facilitator Superfamily X953_02490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_02495 PF01741 Large-conductance mechanosensitive channel, MscL X953_02505 PF01546 Peptidase family M20/M25/M40 X953_02505 PF07687 Peptidase dimerisation domain X953_02510 PF00581 Rhodanese-like domain X953_02515 PF13302 Acetyltransferase (GNAT) domain X953_02515 PF00958 GMP synthase C terminal domain X953_02515 PF00117 Glutamine amidotransferase class-I X953_02515 PF03352 Methyladenine glycosylase X953_02515 PF13673 Acetyltransferase (GNAT) domain X953_02520 PF06968 Biotin and Thiamin Synthesis associated domain X953_02520 PF04055 Radical SAM superfamily X953_02525 PF02632 BioY family X953_02530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_02530 PF00672 HAMP domain X953_02530 PF02743 Cache domain X953_02540 PF01425 Amidase X953_02545 PF00248 Aldo/keto reductase family X953_02550 PF03193 RsgA GTPase X953_02560 PF01070 FMN-dependent dehydrogenase X953_02565 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) X953_02570 PF00753 Metallo-beta-lactamase superfamily X953_02575 PF01323 DSBA-like thioredoxin domain X953_02580 PF01032 FecCD transport family X953_02585 PF01032 FecCD transport family X953_02590 PF00005 ABC transporter X953_02595 PF01497 Periplasmic binding protein X953_02605 PF00155 Aminotransferase class I and II X953_02610 PF01502 Phosphoribosyl-AMP cyclohydrolase X953_02610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase X953_02615 PF00977 Histidine biosynthesis protein X953_02620 PF00977 Histidine biosynthesis protein X953_02625 PF00117 Glutamine amidotransferase class-I X953_02630 PF00475 Imidazoleglycerol-phosphate dehydratase X953_02635 PF00815 Histidinol dehydrogenase X953_02640 PF01634 ATP phosphoribosyltransferase X953_02645 PF13393 Histidyl-tRNA synthetase X953_02650 PF02811 PHP domain X953_02655 PF04304 Protein of unknown function (DUF454) X953_02665 PF01565 FAD binding domain X953_02665 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain X953_02670 PF00005 ABC transporter X953_02675 PF00528 Binding-protein-dependent transport system inner membrane component X953_02680 PF00528 Binding-protein-dependent transport system inner membrane component X953_02690 PF08546 Ketopantoate reductase PanE/ApbA C terminal X953_02690 PF02558 Ketopantoate reductase PanE/ApbA X953_02700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X953_02705 PF13539 D-alanyl-D-alanine carboxypeptidase X953_02710 PF02660 Glycerol-3-phosphate acyltransferase X953_02715 PF04306 Protein of unknown function (DUF456) X953_02720 PF08543 Phosphomethylpyrimidine kinase X953_02725 PF00857 Isochorismatase family X953_02735 PF03129 Anticodon binding domain X953_02735 PF09180 Prolyl-tRNA synthetase, C-terminal X953_02735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X953_02745 PF00497 Bacterial extracellular solute-binding proteins, family 3 X953_02750 PF00528 Binding-protein-dependent transport system inner membrane component X953_02755 PF00005 ABC transporter X953_02760 PF07726 ATPase family associated with various cellular activities (AAA) X953_02760 PF17863 AAA lid domain X953_02765 PF00255 Glutathione peroxidase X953_02780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain X953_02780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain X953_02805 PF00313 'Cold-shock' DNA-binding domain X953_02825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X953_02825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase X953_02830 PF13673 Acetyltransferase (GNAT) domain X953_02835 PF01258 Prokaryotic dksA/traR C4-type zinc finger X953_02840 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) X953_02845 PF13180 PDZ domain X953_02850 PF00486 Transcriptional regulatory protein, C terminal X953_02850 PF00072 Response regulator receiver domain X953_02855 PF00512 His Kinase A (phospho-acceptor) domain X953_02855 PF00672 HAMP domain X953_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_02870 PF08892 YqcI/YcgG family X953_02875 PF12679 ABC-2 family transporter protein X953_02880 PF00005 ABC transporter X953_02890 PF02803 Thiolase, C-terminal domain X953_02890 PF00108 Thiolase, N-terminal domain X953_02900 PF09587 Bacterial capsule synthesis protein PGA_cap X953_02910 PF00085 Thioredoxin X953_02920 PF00072 Response regulator receiver domain X953_02920 PF00486 Transcriptional regulatory protein, C terminal X953_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_02925 PF00512 His Kinase A (phospho-acceptor) domain X953_02925 PF00672 HAMP domain X953_02935 PF00781 Diacylglycerol kinase catalytic domain X953_02945 PF01047 MarR family X953_02965 PF12146 Serine aminopeptidase, S33 X953_02970 PF02645 Uncharacterised protein, DegV family COG1307 X953_02980 PF00271 Helicase conserved C-terminal domain X953_02980 PF00270 DEAD/DEAH box helicase X953_02985 PF01694 Rhomboid family X953_02990 PF01648 4'-phosphopantetheinyl transferase superfamily X953_02995 PF01256 Carbohydrate kinase X953_02995 PF03853 YjeF-related protein N-terminus X953_03005 PF00842 Alanine racemase, C-terminal domain X953_03005 PF01168 Alanine racemase, N-terminal domain X953_03015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system X953_03025 PF01740 STAS domain X953_03030 PF13581 Histidine kinase-like ATPase domain X953_03035 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain X953_03035 PF07228 Stage II sporulation protein E (SpoIIE) X953_03040 PF01740 STAS domain X953_03045 PF13581 Histidine kinase-like ATPase domain X953_03050 PF04542 Sigma-70 region 2 X953_03050 PF04539 Sigma-70 region 3 X953_03050 PF04545 Sigma-70, region 4 X953_03055 PF07228 Stage II sporulation protein E (SpoIIE) X953_03060 PF00575 S1 RNA binding domain X953_03060 PF16921 Tex protein YqgF-like domain X953_03060 PF09371 Tex-like protein N-terminal domain X953_03060 PF17674 HHH domain X953_03065 PF06628 Catalase-related immune-responsive X953_03065 PF00199 Catalase X953_03070 PF10263 SprT-like family X953_03160 PF02769 AIR synthase related protein, C-terminal domain X953_03160 PF00586 AIR synthase related protein, N-terminal domain X953_03165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE X953_03170 PF00814 Glycoprotease family X953_03175 PF00583 Acetyltransferase (GNAT) family X953_03180 PF00814 Glycoprotease family X953_03185 PF01098 Cell cycle protein X953_03190 PF00005 ABC transporter X953_03190 PF12848 ABC transporter X953_03190 PF16326 ABC transporter C-terminal domain X953_03195 PF01967 MoaC family X953_03200 PF02629 CoA binding domain X953_03200 PF06971 Putative DNA-binding protein N-terminus X953_03210 PF02517 CPBP intramembrane metalloprotease X953_03215 PF00166 Chaperonin 10 Kd subunit X953_03220 PF00118 TCP-1/cpn60 chaperonin family X953_03225 PF14659 Phage integrase, N-terminal SAM-like domain X953_03225 PF00589 Phage integrase family X953_03285 PF13005 zinc-finger binding domain of transposase IS66 X953_03285 PF03050 Transposase IS66 family X953_03285 PF13817 IS66 C-terminal element X953_03285 PF13007 Transposase C of IS166 homeodomain X953_03300 PF13476 AAA domain X953_03315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) X953_03320 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) X953_03325 PF04205 FMN-binding domain X953_03325 PF00890 FAD binding domain X953_03325 PF03358 NADPH-dependent FMN reductase X953_03330 PF02875 Mur ligase family, glutamate ligase domain X953_03330 PF01225 Mur ligase family, catalytic domain X953_03330 PF08245 Mur ligase middle domain X953_03335 PF13411 MerR HTH family regulatory protein X953_03335 PF06445 GyrI-like small molecule binding domain X953_03340 PF00583 Acetyltransferase (GNAT) family X953_03345 PF00440 Bacterial regulatory proteins, tetR family X953_03345 PF17932 Tetracyclin repressor-like, C-terminal domain X953_03350 PF02028 BCCT, betaine/carnitine/choline family transporter X953_03355 PF03649 Uncharacterised protein family (UPF0014) X953_03360 PF00005 ABC transporter X953_03370 PF00072 Response regulator receiver domain X953_03370 PF00486 Transcriptional regulatory protein, C terminal X953_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_03380 PF00005 ABC transporter X953_03385 PF02687 FtsX-like permease family X953_03390 PF00924 Mechanosensitive ion channel X953_03395 PF03323 Bacillus/Clostridium GerA spore germination protein X953_03405 PF05504 Spore germination B3/ GerAC like, C-terminal X953_03420 PF03806 AbgT putative transporter family X953_03445 PF17863 AAA lid domain X953_03445 PF07726 ATPase family associated with various cellular activities (AAA) X953_03450 PF01882 Protein of unknown function DUF58 X953_03455 PF11992 Domain of unknown function (DUF3488) X953_03455 PF13559 Domain of unknown function (DUF4129) X953_03455 PF01841 Transglutaminase-like superfamily X953_03460 PF02540 NAD synthase X953_03460 PF00958 GMP synthase C terminal domain X953_03460 PF00117 Glutamine amidotransferase class-I X953_03470 PF00860 Permease family X953_03480 PF01625 Peptide methionine sulfoxide reductase X953_03485 PF03473 MOSC domain X953_03485 PF03475 3-alpha domain X953_03495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_03505 PF00731 AIR carboxylase X953_03510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain X953_03510 PF02222 ATP-grasp domain X953_03515 PF10397 Adenylosuccinate lyase C-terminus X953_03515 PF00206 Lyase X953_03520 PF01259 SAICAR synthetase X953_03525 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase X953_03535 PF02769 AIR synthase related protein, C-terminal domain X953_03535 PF00586 AIR synthase related protein, N-terminal domain X953_03535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain X953_03540 PF00156 Phosphoribosyl transferase domain X953_03545 PF02769 AIR synthase related protein, C-terminal domain X953_03545 PF00586 AIR synthase related protein, N-terminal domain X953_03550 PF00551 Formyl transferase X953_03555 PF01808 AICARFT/IMPCHase bienzyme X953_03555 PF02142 MGS-like domain X953_03560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain X953_03560 PF02843 Phosphoribosylglycinamide synthetase, C domain X953_03560 PF02844 Phosphoribosylglycinamide synthetase, N domain X953_03565 PF13382 Adenine deaminase C-terminal domain X953_03565 PF01979 Amidohydrolase family X953_03570 PF11258 Protein of unknown function (DUF3048) N-terminal domain X953_03570 PF17479 Protein of unknown function (DUF3048) C-terminal domain X953_03575 PF01371 Trp repressor protein X953_03580 PF01026 TatD related DNase X953_03590 PF01884 PcrB family X953_03595 PF13361 UvrD-like helicase C-terminal domain X953_03595 PF00580 UvrD/REP helicase N-terminal domain X953_03600 PF00533 BRCA1 C Terminus (BRCT) domain X953_03600 PF01653 NAD-dependent DNA ligase adenylation domain X953_03600 PF03120 NAD-dependent DNA ligase OB-fold domain X953_03600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain X953_03600 PF12826 Helix-hairpin-helix motif X953_03605 PF07537 CamS sex pheromone cAM373 precursor X953_03610 PF00171 Aldehyde dehydrogenase family X953_03615 PF18801 response regulator aspartate phosphatase H, N terminal X953_03625 PF00474 Sodium:solute symporter family X953_03630 PF02686 Glu-tRNAGln amidotransferase C subunit X953_03635 PF01425 Amidase X953_03640 PF02934 GatB/GatE catalytic domain X953_03640 PF02637 GatB domain X953_03645 PF00781 Diacylglycerol kinase catalytic domain X953_03650 PF05958 tRNA (Uracil-5-)-methyltransferase X953_03650 PF01938 TRAM domain X953_03655 PF17760 UvrA interaction domain X953_03655 PF17755 UvrA DNA-binding domain X953_03665 PF01040 UbiA prenyltransferase family X953_03680 PF03626 Prokaryotic Cytochrome C oxidase subunit IV X953_03685 PF00510 Cytochrome c oxidase subunit III X953_03690 PF00115 Cytochrome C and Quinol oxidase polypeptide I X953_03695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X953_03695 PF02790 Cytochrome C oxidase subunit II, transmembrane domain X953_03700 PF00912 Transglycosylase X953_03700 PF00905 Penicillin binding protein transpeptidase domain X953_03705 PF00313 'Cold-shock' DNA-binding domain X953_03710 PF00872 Transposase, Mutator family X953_03715 PF01040 UbiA prenyltransferase family X953_03725 PF12728 Helix-turn-helix domain X953_03740 PF00881 Nitroreductase family X953_03745 PF01479 S4 domain X953_03745 PF00849 RNA pseudouridylate synthase X953_03750 PF03576 Peptidase family S58 X953_03760 PF00578 AhpC/TSA family X953_03770 PF16326 ABC transporter C-terminal domain X953_03770 PF12848 ABC transporter X953_03770 PF00005 ABC transporter X953_03795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X953_03795 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_03800 PF00209 Sodium:neurotransmitter symporter family X953_03805 PF03553 Na+/H+ antiporter family X953_03810 PF00155 Aminotransferase class I and II X953_03815 PF00205 Thiamine pyrophosphate enzyme, central domain X953_03815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_03815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_03820 PF00171 Aldehyde dehydrogenase family X953_03825 PF16653 Saccharopine dehydrogenase C-terminal domain X953_03825 PF03435 Saccharopine dehydrogenase NADP binding domain X953_03830 PF01614 Bacterial transcriptional regulator X953_03830 PF09339 IclR helix-turn-helix domain X953_03840 PF00171 Aldehyde dehydrogenase family X953_03845 PF02770 Acyl-CoA dehydrogenase, middle domain X953_03845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_03845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_03850 PF02515 CoA-transferase family III X953_03860 PF00188 Cysteine-rich secretory protein family X953_03865 PF04960 Glutaminase X953_03870 PF02586 SOS response associated peptidase (SRAP) X953_03875 PF01235 Sodium:alanine symporter family X953_03885 PF03631 Virulence factor BrkB X953_03895 PF07690 Major Facilitator Superfamily X953_03905 PF14167 YfkD-like protein X953_03915 PF13726 Na+-H+ antiporter family X953_03915 PF03553 Na+/H+ antiporter family X953_03920 PF01522 Polysaccharide deacetylase X953_03925 PF08448 PAS fold X953_03925 PF13426 PAS domain X953_03925 PF05231 MASE1 X953_03925 PF00990 Diguanylate cyclase, GGDEF domain X953_03925 PF00563 EAL domain X953_03925 PF08447 PAS fold X953_03935 PF00501 AMP-binding enzyme X953_03935 PF13193 AMP-binding enzyme C-terminal domain X953_03940 PF17871 AAA lid domain X953_03940 PF07724 AAA domain (Cdc48 subfamily) X953_03940 PF10431 C-terminal, D2-small domain, of ClpB protein X953_03940 PF00004 ATPase family associated with various cellular activities (AAA) X953_03945 PF00753 Metallo-beta-lactamase superfamily X953_03945 PF03772 Competence protein X953_03950 PF07729 FCD domain X953_03950 PF00392 Bacterial regulatory proteins, gntR family X953_03955 PF00005 ABC transporter X953_03965 PF12679 ABC-2 family transporter protein X953_03970 PF00005 ABC transporter X953_03970 PF13732 Domain of unknown function (DUF4162) X953_03985 PF07702 UTRA domain X953_03985 PF00392 Bacterial regulatory proteins, gntR family X953_04010 PF01370 NAD dependent epimerase/dehydratase family X953_04010 PF08338 Domain of unknown function (DUF1731) X953_04015 PF02631 RecX family X953_04020 PF00106 short chain dehydrogenase X953_04025 PF08838 Protein of unknown function (DUF1811) X953_04030 PF04307 LexA-binding, inner membrane-associated putative hydrolase X953_04050 PF04167 Protein of unknown function (DUF402) X953_04055 PF00005 ABC transporter X953_04055 PF00664 ABC transporter transmembrane region X953_04060 PF00202 Aminotransferase class-III X953_04065 PF07885 Ion channel X953_04070 PF00578 AhpC/TSA family X953_04075 PF02397 Bacterial sugar transferase X953_04080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X953_04080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X953_04085 PF01475 Ferric uptake regulator family X953_04090 PF04715 Anthranilate synthase component I, N terminal region X953_04090 PF00425 chorismate binding enzyme X953_04095 PF00117 Glutamine amidotransferase class-I X953_04100 PF11023 Zinc-ribbon containing domain X953_04105 PF14540 Nucleotidyltransferase-like X953_04105 PF18576 Helix-turn-helix domain X953_04220 PF06874 Firmicute fructose-1,6-bisphosphatase X953_04230 PF03176 MMPL family X953_04245 PF02545 Maf-like protein X953_04255 PF01638 HxlR-like helix-turn-helix X953_04265 PF03358 NADPH-dependent FMN reductase X953_04285 PF01266 FAD dependent oxidoreductase X953_04295 PF01368 DHH family X953_04295 PF02833 DHHA2 domain X953_04300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X953_04305 PF08179 Small acid-soluble spore protein P family X953_04315 PF06908 YspA SLOG family X953_04345 PF00583 Acetyltransferase (GNAT) family X953_04350 PF01177 Asp/Glu/Hydantoin racemase X953_04370 PF02254 TrkA-N domain X953_04370 PF07885 Ion channel X953_04380 PF00117 Glutamine amidotransferase class-I X953_04380 PF03352 Methyladenine glycosylase X953_04380 PF13302 Acetyltransferase (GNAT) domain X953_04380 PF13673 Acetyltransferase (GNAT) domain X953_04380 PF00958 GMP synthase C terminal domain X953_04400 PF00291 Pyridoxal-phosphate dependent enzyme X953_04405 PF06013 Proteins of 100 residues with WXG X953_04410 PF08817 WXG100 protein secretion system (Wss), protein YukD X953_04415 PF10140 WXG100 protein secretion system (Wss), protein YukC X953_04420 PF12538 DNA transporter X953_04420 PF01580 FtsK/SpoIIIE family X953_04430 PF17355 Family of unknown function (DUF5383) X953_04435 PF16888 Domain of unknown function (DUF5082) X953_04445 PF14431 YwqJ-like deaminase X953_04445 PF14449 Pre-toxin TG X953_04445 PF04740 LXG domain of WXG superfamily X953_04490 PF04740 LXG domain of WXG superfamily X953_04490 PF14449 Pre-toxin TG X953_04490 PF14431 YwqJ-like deaminase X953_04565 PF07690 Major Facilitator Superfamily X953_04570 PF01472 PUA domain X953_04570 PF00696 Amino acid kinase family X953_04575 PF00171 Aldehyde dehydrogenase family X953_04580 PF01588 Putative tRNA binding domain X953_04590 PF00582 Universal stress protein family X953_04595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_04600 PF02913 FAD linked oxidases, C-terminal domain X953_04600 PF01565 FAD binding domain X953_04610 PF01063 Amino-transferase class IV X953_04620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X953_04620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X953_04620 PF01842 ACT domain X953_04625 PF00266 Aminotransferase class-V X953_04640 PF06271 RDD family X953_04645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X953_04645 PF07733 Bacterial DNA polymerase III alpha NTPase domain X953_04645 PF14579 Helix-hairpin-helix motif X953_04645 PF14480 DNA polymerase III polC-type N-terminus I X953_04645 PF00929 Exonuclease X953_04645 PF11490 DNA polymerase III polC-type N-terminus II X953_04645 PF02811 PHP domain X953_04645 PF01336 OB-fold nucleic acid binding domain X953_04650 PF01343 Peptidase family S49 X953_04655 PF06271 RDD family X953_04660 PF00501 AMP-binding enzyme X953_04660 PF13193 AMP-binding enzyme C-terminal domain X953_04670 PF17334 Minor curli fiber component A X953_04685 PF00156 Phosphoribosyl transferase domain X953_04690 PF00860 Permease family X953_04695 PF07690 Major Facilitator Superfamily X953_04710 PF14140 YpzI-like protein X953_04715 PF00107 Zinc-binding dehydrogenase X953_04715 PF08240 Alcohol dehydrogenase GroES-like domain X953_04730 PF00550 Phosphopantetheine attachment site X953_04730 PF07993 Male sterility protein X953_04740 PF01546 Peptidase family M20/M25/M40 X953_04740 PF07687 Peptidase dimerisation domain X953_04750 PF01061 ABC-2 type transporter X953_04755 PF12867 DinB superfamily X953_04765 PF02774 Semialdehyde dehydrogenase, dimerisation domain X953_04765 PF01118 Semialdehyde dehydrogenase, NAD binding domain X953_04770 PF01960 ArgJ family X953_04775 PF00696 Amino acid kinase family X953_04780 PF00202 Aminotransferase class-III X953_04785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X953_04785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain X953_04785 PF02142 MGS-like domain X953_04790 PF00326 Prolyl oligopeptidase family X953_04790 PF07676 WD40-like Beta Propeller Repeat X953_04800 PF01063 Amino-transferase class IV X953_04820 PF08331 Domain of unknown function (DUF1730) X953_04825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain X953_04825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain X953_04830 PF12671 Putative amidase domain X953_04835 PF00588 SpoU rRNA Methylase family X953_04850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) X953_04850 PF02817 e3 binding domain X953_04850 PF00364 Biotin-requiring enzyme X953_04855 PF07662 Na+ dependent nucleoside transporter C-terminus X953_04855 PF01773 Na+ dependent nucleoside transporter N-terminus X953_04860 PF00171 Aldehyde dehydrogenase family X953_04865 PF01554 MatE X953_04870 PF04101 Glycosyltransferase family 28 C-terminal domain X953_04870 PF03033 Glycosyltransferase family 28 N-terminal domain X953_04880 PF03845 Spore germination protein X953_04885 PF03323 Bacillus/Clostridium GerA spore germination protein X953_04890 PF00484 Carbonic anhydrase X953_04900 PF00005 ABC transporter X953_04900 PF00664 ABC transporter transmembrane region X953_04905 PF00664 ABC transporter transmembrane region X953_04905 PF00005 ABC transporter X953_04910 PF13180 PDZ domain X953_04925 PF04542 Sigma-70 region 2 X953_04935 PF14148 YhdB-like protein X953_04950 PF02664 S-Ribosylhomocysteinase (LuxS) X953_04960 PF01053 Cys/Met metabolism PLP-dependent enzyme X953_04965 PF01546 Peptidase family M20/M25/M40 X953_04965 PF07687 Peptidase dimerisation domain X953_04970 PF00106 short chain dehydrogenase X953_04990 PF00005 ABC transporter X953_04995 PF00557 Metallopeptidase family M24 X953_05010 PF03591 AzlC protein X953_05020 PF01545 Cation efflux family X953_05020 PF16916 Dimerisation domain of Zinc Transporter X953_05030 PF11700 Vacuole effluxer Atg22 like X953_05040 PF10415 Fumarase C C-terminus X953_05040 PF00206 Lyase X953_05045 PF00269 Small, acid-soluble spore proteins, alpha/beta type X953_05050 PF03459 TOBE domain X953_05050 PF17912 MalK OB fold domain X953_05050 PF00005 ABC transporter X953_05055 PF13556 PucR C-terminal helix-turn-helix domain X953_05060 PF06133 Control of competence regulator ComK, YlbF/YmcA X953_05065 PF00378 Enoyl-CoA hydratase/isomerase X953_05070 PF14120 YhzD-like protein X953_05075 PF13732 Domain of unknown function (DUF4162) X953_05075 PF00005 ABC transporter X953_05090 PF00149 Calcineurin-like phosphoesterase X953_05095 PF13514 AAA domain X953_05105 PF01966 HD domain X953_05105 PF01336 OB-fold nucleic acid binding domain X953_05125 PF11667 Putative zincin peptidase X953_05130 PF08963 Protein of unknown function (DUF1878) X953_05135 PF12802 MarR family X953_05140 PF00571 CBS domain X953_05140 PF00005 ABC transporter X953_05145 PF00528 Binding-protein-dependent transport system inner membrane component X953_05150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system X953_05155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system X953_05160 PF12732 YtxH-like protein X953_05165 PF17099 Tryptophan transporter TrpP X953_05170 PF01230 HIT domain X953_05175 PF00005 ABC transporter X953_05180 PF05975 Bacterial ABC transporter protein EcsB X953_05185 PF07687 Peptidase dimerisation domain X953_05185 PF01546 Peptidase family M20/M25/M40 X953_05190 PF00210 Ferritin-like domain X953_05200 PF07690 Major Facilitator Superfamily X953_05210 PF07730 Histidine kinase X953_05210 PF00672 HAMP domain X953_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_05215 PF00196 Bacterial regulatory proteins, luxR family X953_05215 PF00072 Response regulator receiver domain X953_05225 PF03992 Antibiotic biosynthesis monooxygenase X953_05230 PF00912 Transglycosylase X953_05230 PF00905 Penicillin binding protein transpeptidase domain X953_05235 PF01208 Uroporphyrinogen decarboxylase (URO-D) X953_05250 PF01432 Peptidase family M3 X953_05250 PF08439 Oligopeptidase F X953_05255 PF14149 YhfH-like protein X953_05260 PF12706 Beta-lactamase superfamily domain X953_05265 PF10437 Bacterial lipoate protein ligase C-terminus X953_05265 PF03099 Biotin/lipoate A/B protein ligase family X953_05270 PF00501 AMP-binding enzyme X953_05270 PF13193 AMP-binding enzyme C-terminal domain X953_05285 PF09335 SNARE associated Golgi protein X953_05290 PF10502 Signal peptidase, peptidase S26 X953_05295 PF12705 PD-(D/E)XK nuclease superfamily X953_05300 PF13361 UvrD-like helicase C-terminal domain X953_05300 PF00580 UvrD/REP helicase N-terminal domain X953_05300 PF12705 PD-(D/E)XK nuclease superfamily X953_05310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X953_05310 PF09125 Cytochrome C oxidase subunit II, transmembrane X953_05315 PF00115 Cytochrome C and Quinol oxidase polypeptide I X953_05330 PF10676 Spore germination protein gerPA/gerPF X953_05345 PF10737 Spore germination protein GerPC X953_05360 PF04235 Protein of unknown function (DUF418) X953_05365 PF00202 Aminotransferase class-III X953_05375 PF07282 Putative transposase DNA-binding domain X953_05375 PF01385 Probable transposase X953_05375 PF12323 Helix-turn-helix domain X953_05380 PF00128 Alpha amylase, catalytic domain X953_05380 PF02903 Alpha amylase, N-terminal ig-like domain X953_05380 PF16657 Maltogenic Amylase, C-terminal domain X953_05395 PF02645 Uncharacterised protein, DegV family COG1307 X953_05400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_05400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_05430 PF00326 Prolyl oligopeptidase family X953_05435 PF01883 Iron-sulfur cluster assembly protein X953_05445 PF02391 MoaE protein X953_05455 PF00027 Cyclic nucleotide-binding domain X953_05455 PF13545 Crp-like helix-turn-helix domain X953_05470 PF00325 Bacterial regulatory proteins, crp family X953_05470 PF00027 Cyclic nucleotide-binding domain X953_05475 PF02673 Bacitracin resistance protein BacA X953_05495 PF02608 ABC transporter substrate-binding protein PnrA-like X953_05500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III X953_05500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal X953_05505 PF00109 Beta-ketoacyl synthase, N-terminal domain X953_05505 PF02801 Beta-ketoacyl synthase, C-terminal domain X953_05515 PF12227 Protein of unknown function (DUF3603) X953_05520 PF00579 tRNA synthetases class I (W and Y) X953_05530 PF03070 TENA/THI-4/PQQC family X953_05535 PF01546 Peptidase family M20/M25/M40 X953_05535 PF07687 Peptidase dimerisation domain X953_05540 PF00005 ABC transporter X953_05545 PF00528 Binding-protein-dependent transport system inner membrane component X953_05550 PF09084 NMT1/THI5 like X953_05555 PF07563 Protein of unknown function (DUF1541) X953_05565 PF13508 Acetyltransferase (GNAT) domain X953_05570 PF03960 ArsC family X953_05575 PF05389 Negative regulator of genetic competence (MecA) X953_05585 PF01432 Peptidase family M3 X953_05585 PF08439 Oligopeptidase F X953_05595 PF01152 Bacterial-like globin X953_05600 PF01928 CYTH domain X953_05605 PF04607 Region found in RelA / SpoT proteins X953_05610 PF01513 ATP-NAD kinase X953_05615 PF00849 RNA pseudouridylate synthase X953_05620 PF00149 Calcineurin-like phosphoesterase X953_05625 PF03448 MgtE intracellular N domain X953_05625 PF01769 Divalent cation transporter X953_05625 PF00571 CBS domain X953_05655 PF04239 Protein of unknown function (DUF421) X953_05660 PF13673 Acetyltransferase (GNAT) domain X953_05670 PF00756 Putative esterase X953_05675 PF00005 ABC transporter X953_05675 PF00664 ABC transporter transmembrane region X953_05680 PF00664 ABC transporter transmembrane region X953_05680 PF00005 ABC transporter X953_05700 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment X953_05700 PF01297 Zinc-uptake complex component A periplasmic X953_05735 PF00155 Aminotransferase class I and II X953_05755 PF03009 Glycerophosphoryl diester phosphodiesterase family X953_05800 PF01389 OmpA-like transmembrane domain X953_05800 PF00691 OmpA family X953_05810 PF00477 Small hydrophilic plant seed protein X953_05810 PF10685 Stress-induced bacterial acidophilic repeat motif X953_05815 PF12848 ABC transporter X953_05815 PF00005 ABC transporter X953_05830 PF00872 Transposase, Mutator family X953_05835 PF00107 Zinc-binding dehydrogenase X953_05835 PF16884 N-terminal domain of oxidoreductase X953_05850 PF13302 Acetyltransferase (GNAT) domain X953_05860 PF01494 FAD binding domain X953_05875 PF02806 Alpha amylase, C-terminal all-beta domain X953_05875 PF00128 Alpha amylase, catalytic domain X953_05875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) X953_05880 PF00483 Nucleotidyl transferase X953_05885 PF00483 Nucleotidyl transferase X953_05890 PF08323 Starch synthase catalytic domain X953_05890 PF00534 Glycosyl transferases group 1 X953_05895 PF03323 Bacillus/Clostridium GerA spore germination protein X953_05900 PF03845 Spore germination protein X953_05935 PF00293 NUDIX domain X953_05935 PF13344 Haloacid dehalogenase-like hydrolase X953_05940 PF06039 Malate:quinone oxidoreductase (Mqo) X953_06015 PF02073 Thermophilic metalloprotease (M29) X953_06020 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain X953_06020 PF01740 STAS domain X953_06055 PF09335 SNARE associated Golgi protein X953_06065 PF06271 RDD family X953_06080 PF13302 Acetyltransferase (GNAT) domain X953_06090 PF00293 NUDIX domain X953_06115 PF00565 Staphylococcal nuclease homologue X953_06115 PF05901 Excalibur calcium-binding domain X953_06125 PF07883 Cupin domain X953_06135 PF04229 GrpB protein X953_06135 PF13673 Acetyltransferase (GNAT) domain X953_06175 PF01497 Periplasmic binding protein X953_06180 PF01032 FecCD transport family X953_06185 PF00005 ABC transporter X953_06190 PF03186 CobD/Cbib protein X953_06195 PF00155 Aminotransferase class I and II X953_06205 PF07685 CobB/CobQ-like glutamine amidotransferase domain X953_06210 PF02654 Cobalamin-5-phosphate synthase X953_06215 PF00300 Histidine phosphatase superfamily (branch 1) X953_06225 PF01923 Cobalamin adenosyltransferase X953_06250 PF01546 Peptidase family M20/M25/M40 X953_06250 PF07687 Peptidase dimerisation domain X953_06260 PF13378 Enolase C-terminal domain-like X953_06260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X953_06275 PF02810 SEC-C motif X953_06275 PF07517 SecA DEAD-like domain X953_06275 PF07516 SecA Wing and Scaffold domain X953_06275 PF01043 SecA preprotein cross-linking domain X953_06285 PF07690 Major Facilitator Superfamily X953_06335 PF01230 HIT domain X953_06370 PF02585 GlcNAc-PI de-N-acetylase X953_06400 PF00293 NUDIX domain X953_06400 PF13344 Haloacid dehalogenase-like hydrolase X953_06440 PF00561 alpha/beta hydrolase fold X953_06465 PF00583 Acetyltransferase (GNAT) family X953_06495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X953_06500 PF00583 Acetyltransferase (GNAT) family X953_06505 PF10997 Alternate to MurJ X953_06565 PF00005 ABC transporter X953_06590 PF13673 Acetyltransferase (GNAT) domain X953_06590 PF04229 GrpB protein X953_06595 PF00465 Iron-containing alcohol dehydrogenase X953_06605 PF00144 Beta-lactamase X953_06620 PF00205 Thiamine pyrophosphate enzyme, central domain X953_06620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_06620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_06650 PF02875 Mur ligase family, glutamate ligase domain X953_06650 PF08245 Mur ligase middle domain X953_06650 PF01225 Mur ligase family, catalytic domain X953_06705 PF02517 CPBP intramembrane metalloprotease X953_06720 PF08241 Methyltransferase domain X953_06745 PF03551 Transcriptional regulator PadR-like family X953_06760 PF00144 Beta-lactamase X953_06765 PF04055 Radical SAM superfamily X953_06765 PF06968 Biotin and Thiamin Synthesis associated domain X953_06770 PF00202 Aminotransferase class-III X953_06780 PF02632 BioY family X953_06840 PF00561 alpha/beta hydrolase fold X953_06910 PF07690 Major Facilitator Superfamily X953_06915 PF00392 Bacterial regulatory proteins, gntR family X953_06915 PF07729 FCD domain X953_06930 PF00486 Transcriptional regulatory protein, C terminal X953_06930 PF00072 Response regulator receiver domain X953_06935 PF00005 ABC transporter X953_06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_06945 PF00512 His Kinase A (phospho-acceptor) domain X953_06970 PF04264 YceI-like domain X953_06980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X953_06985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X953_06990 PF01047 MarR family X953_06995 PF13739 Deacetylase PdaC X953_06995 PF11738 Protein of unknown function (DUF3298) X953_06995 PF01522 Polysaccharide deacetylase X953_07000 PF01625 Peptide methionine sulfoxide reductase X953_07000 PF01641 SelR domain X953_07010 PF00583 Acetyltransferase (GNAT) family X953_07045 PF03413 Peptidase propeptide and YPEB domain X953_07045 PF02868 Thermolysin metallopeptidase, alpha-helical domain X953_07045 PF01447 Thermolysin metallopeptidase, catalytic domain X953_07045 PF07504 Fungalysin/Thermolysin Propeptide Motif X953_07060 PF00230 Major intrinsic protein X953_07065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X953_07065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X953_07070 PF02733 Dak1 domain X953_07075 PF02734 DAK2 domain X953_07080 PF03610 PTS system fructose IIA component X953_07115 PF00005 ABC transporter X953_07120 PF04397 LytTr DNA-binding domain X953_07120 PF00072 Response regulator receiver domain X953_07125 PF03551 Transcriptional regulator PadR-like family X953_07135 PF08756 YfkB-like domain X953_07135 PF04055 Radical SAM superfamily X953_07145 PF02805 Metal binding domain of Ada X953_07145 PF12833 Helix-turn-helix domain X953_07150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain X953_07150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain X953_07155 PF02277 Phosphoribosyltransferase X953_07170 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin X953_07200 PF01204 Trehalase X953_07220 PF02667 Short chain fatty acid transporter X953_07240 PF00293 NUDIX domain X953_07245 PF00271 Helicase conserved C-terminal domain X953_07245 PF04851 Type III restriction enzyme, res subunit X953_07250 PF00271 Helicase conserved C-terminal domain X953_07250 PF04851 Type III restriction enzyme, res subunit X953_07260 PF00171 Aldehyde dehydrogenase family X953_07285 PF13396 Phospholipase_D-nuclease N-terminal X953_07285 PF13091 PLD-like domain X953_07395 PF11188 Protein of unknown function (DUF2975) X953_07400 PF13443 Cro/C1-type HTH DNA-binding domain X953_07405 PF05675 Protein of unknown function (DUF817) X953_07425 PF00300 Histidine phosphatase superfamily (branch 1) X953_07435 PF00005 ABC transporter X953_07450 PF02016 LD-carboxypeptidase N-terminal domain X953_07450 PF17676 LD-carboxypeptidase C-terminal domain X953_07455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X953_07480 PF00274 Fructose-bisphosphate aldolase class-I X953_07500 PF00296 Luciferase-like monooxygenase X953_07510 PF01557 Fumarylacetoacetate (FAA) hydrolase family X953_07515 PF08447 PAS fold X953_07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_07515 PF13426 PAS domain X953_07520 PF02229 Transcriptional Coactivator p15 (PC4) X953_07565 PF00575 S1 RNA binding domain X953_07575 PF00171 Aldehyde dehydrogenase family X953_07585 PF00171 Aldehyde dehydrogenase family X953_07595 PF00266 Aminotransferase class-V X953_07600 PF04199 Putative cyclase X953_07605 PF03301 Tryptophan 2,3-dioxygenase X953_07610 PF00209 Sodium:neurotransmitter symporter family X953_07615 PF00486 Transcriptional regulatory protein, C terminal X953_07615 PF00072 Response regulator receiver domain X953_07620 PF00672 HAMP domain X953_07620 PF13426 PAS domain X953_07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_07620 PF00512 His Kinase A (phospho-acceptor) domain X953_07630 PF01435 Peptidase family M48 X953_07655 PF00144 Beta-lactamase X953_07655 PF11954 Domain of unknown function (DUF3471) X953_07660 PF04229 GrpB protein X953_07660 PF13673 Acetyltransferase (GNAT) domain X953_07680 PF00248 Aldo/keto reductase family X953_07685 PF00872 Transposase, Mutator family X953_07695 PF04238 Protein of unknown function (DUF420) X953_07700 PF01209 ubiE/COQ5 methyltransferase family X953_07710 PF00561 alpha/beta hydrolase fold X953_07740 PF01740 STAS domain X953_07745 PF02028 BCCT, betaine/carnitine/choline family transporter X953_07750 PF00440 Bacterial regulatory proteins, tetR family X953_07755 PF07690 Major Facilitator Superfamily X953_07765 PF00403 Heavy-metal-associated domain X953_07780 PF10145 Phage-related minor tail protein X953_07780 PF01551 Peptidase family M23 X953_07780 PF01464 Transglycosylase SLT domain X953_07785 PF01261 Xylose isomerase-like TIM barrel X953_07790 PF02417 Chromate transporter X953_07795 PF02417 Chromate transporter X953_07805 PF00440 Bacterial regulatory proteins, tetR family X953_07805 PF16295 Tetracyclin repressor-like, C-terminal domain X953_07810 PF07690 Major Facilitator Superfamily X953_07835 PF00005 ABC transporter X953_07840 PF01032 FecCD transport family X953_07845 PF01497 Periplasmic binding protein X953_07855 PF03928 Haem-degrading X953_07860 PF00107 Zinc-binding dehydrogenase X953_07860 PF08240 Alcohol dehydrogenase GroES-like domain X953_07865 PF00375 Sodium:dicarboxylate symporter family X953_07900 PF02660 Glycerol-3-phosphate acyltransferase X953_07905 PF00266 Aminotransferase class-V X953_07910 PF00884 Sulfatase X953_07915 PF01022 Bacterial regulatory protein, arsR family X953_07920 PF02040 Arsenical pump membrane protein X953_07925 PF01451 Low molecular weight phosphotyrosine protein phosphatase X953_07930 PF01174 SNO glutamine amidotransferase family X953_07940 PF01544 CorA-like Mg2+ transporter protein X953_07950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region X953_07950 PF01872 RibD C-terminal domain X953_07955 PF00677 Lumazine binding domain X953_07960 PF00925 GTP cyclohydrolase II X953_07960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase X953_07965 PF00885 6,7-dimethyl-8-ribityllumazine synthase X953_07970 PF10710 Protein of unknown function (DUF2512) X953_07975 PF02535 ZIP Zinc transporter X953_07980 PF02600 Disulfide bond formation protein DsbB X953_07985 PF13462 Thioredoxin X953_07990 PF01022 Bacterial regulatory protein, arsR family X953_07995 PF00403 Heavy-metal-associated domain X953_08005 PF00375 Sodium:dicarboxylate symporter family X953_08015 PF16736 Single Cache-like X953_08015 PF00989 PAS fold X953_08015 PF00512 His Kinase A (phospho-acceptor) domain X953_08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_08020 PF00486 Transcriptional regulatory protein, C terminal X953_08020 PF00072 Response regulator receiver domain X953_08030 PF16658 Class II release factor RF3, C-terminal domain X953_08030 PF00009 Elongation factor Tu GTP binding domain X953_08030 PF03144 Elongation factor Tu domain 2 X953_08040 PF13302 Acetyltransferase (GNAT) domain X953_08045 PF11132 Transcriptional regulator protein (SplA) X953_08065 PF00741 Gas vesicle protein X953_08075 PF07728 AAA domain (dynein-related subfamily) X953_08095 PF00741 Gas vesicle protein X953_08100 PF05121 Gas vesicle protein K X953_08100 PF00741 Gas vesicle protein X953_08105 PF00741 Gas vesicle protein X953_08135 PF12728 Helix-turn-helix domain X953_08140 PF01740 STAS domain X953_08140 PF00916 Sulfate permease family X953_08145 PF00582 Universal stress protein family X953_08150 PF13529 Peptidase_C39 like family X953_08165 PF03992 Antibiotic biosynthesis monooxygenase X953_08180 PF13426 PAS domain X953_08180 PF01740 STAS domain X953_08195 PF01699 Sodium/calcium exchanger protein X953_08200 PF05154 TM2 domain X953_08205 PF03699 Uncharacterised protein family (UPF0182) X953_08225 PF10026 Predicted Zn-dependent protease (DUF2268) X953_08235 PF14069 Stage VI sporulation protein F X953_08245 PF00854 POT family X953_08260 PF03845 Spore germination protein X953_08265 PF03323 Bacillus/Clostridium GerA spore germination protein X953_08275 PF03851 UV-endonuclease UvdE X953_08280 PF00571 CBS domain X953_08325 PF01479 S4 domain X953_08325 PF00849 RNA pseudouridylate synthase X953_08340 PF01636 Phosphotransferase enzyme family X953_08345 PF14165 YtzH-like protein X953_08350 PF02390 Putative methyltransferase X953_08355 PF00753 Metallo-beta-lactamase superfamily X953_08365 PF05343 M42 glutamyl aminopeptidase X953_08370 PF01931 Protein of unknown function DUF84 X953_08375 PF12323 Helix-turn-helix domain X953_08375 PF01385 Probable transposase X953_08375 PF07282 Putative transposase DNA-binding domain X953_08380 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ X953_08385 PF00085 Thioredoxin X953_08390 PF07285 Protein of unknown function (DUF1444) X953_08395 PF14794 Domain of unknown function (DUF4479) X953_08395 PF01588 Putative tRNA binding domain X953_08400 PF01580 FtsK/SpoIIIE family X953_08400 PF17854 FtsK alpha domain X953_08400 PF09397 Ftsk gamma domain X953_08410 PF08245 Mur ligase middle domain X953_08410 PF01225 Mur ligase family, catalytic domain X953_08410 PF02875 Mur ligase family, glutamate ligase domain X953_08420 PF12732 YtxH-like protein X953_08425 PF01817 Chorismate mutase type II X953_08425 PF00793 DAHP synthetase I family X953_08430 PF00356 Bacterial regulatory proteins, lacI family X953_08435 PF01618 MotA/TolQ/ExbB proton channel family X953_08440 PF13677 Membrane MotB of proton-channel complex MotA/MotB X953_08440 PF00691 OmpA family X953_08445 PF00850 Histone deacetylase domain X953_08450 PF00571 CBS domain X953_08455 PF00583 Acetyltransferase (GNAT) family X953_08460 PF00912 Transglycosylase X953_08460 PF00905 Penicillin binding protein transpeptidase domain X953_08465 PF00579 tRNA synthetases class I (W and Y) X953_08465 PF01479 S4 domain X953_08470 PF00163 Ribosomal protein S4/S9 N-terminal domain X953_08470 PF01479 S4 domain X953_08475 PF00990 Diguanylate cyclase, GGDEF domain X953_08480 PF13185 GAF domain X953_08485 PF00440 Bacterial regulatory proteins, tetR family X953_08490 PF06160 Septation ring formation regulator, EzrA X953_08495 PF00266 Aminotransferase class-V X953_08500 PF02926 THUMP domain X953_08500 PF02568 Thiamine biosynthesis protein (ThiI) X953_08505 PF00269 Small, acid-soluble spore proteins, alpha/beta type X953_08510 PF01513 ATP-NAD kinase X953_08520 PF09579 Sporulation protein YtfJ (Spore_YtfJ) X953_08525 PF08534 Redoxin X953_08535 PF02384 N-6 DNA Methylase X953_08540 PF00871 Acetokinase family X953_08545 PF00994 Probable molybdopterin binding domain X953_08550 PF00582 Universal stress protein family X953_08565 PF04012 PspA/IM30 family X953_08585 PF12706 Beta-lactamase superfamily domain X953_08605 PF00437 Type II/IV secretion system protein X953_08610 PF00437 Type II/IV secretion system protein X953_08615 PF00482 Type II secretion system (T2SS), protein F X953_08625 PF06750 Bacterial Peptidase A24 N-terminal domain X953_08625 PF01478 Type IV leader peptidase family X953_08650 PF00392 Bacterial regulatory proteins, gntR family X953_08650 PF07085 DRTGG domain X953_08650 PF03061 Thioesterase superfamily X953_08650 PF00571 CBS domain X953_08660 PF01368 DHH family X953_08660 PF02272 DHHA1 domain X953_08675 PF14034 Sporulation protein YtrH X953_08680 PF07733 Bacterial DNA polymerase III alpha NTPase domain X953_08680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X953_08680 PF01336 OB-fold nucleic acid binding domain X953_08680 PF14579 Helix-hairpin-helix motif X953_08680 PF02811 PHP domain X953_08685 PF00390 Malic enzyme, N-terminal domain X953_08685 PF03949 Malic enzyme, NAD binding domain X953_08690 PF00392 Bacterial regulatory proteins, gntR family X953_08690 PF07729 FCD domain X953_08695 PF01039 Carboxyl transferase domain X953_08700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit X953_08705 PF00365 Phosphofructokinase X953_08710 PF00224 Pyruvate kinase, barrel domain X953_08710 PF00391 PEP-utilising enzyme, mobile domain X953_08710 PF02887 Pyruvate kinase, alpha/beta domain X953_08715 PF04186 FxsA cytoplasmic membrane protein X953_08720 PF01594 AI-2E family transporter X953_08725 PF00285 Citrate synthase, C-terminal domain X953_08730 PF00180 Isocitrate/isopropylmalate dehydrogenase X953_08735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain X953_08735 PF00056 lactate/malate dehydrogenase, NAD binding domain X953_08745 PF00072 Response regulator receiver domain X953_08745 PF00486 Transcriptional regulatory protein, C terminal X953_08750 PF00989 PAS fold X953_08750 PF16736 Single Cache-like X953_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_08750 PF00512 His Kinase A (phospho-acceptor) domain X953_08755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain X953_08755 PF01367 5'-3' exonuclease, C-terminal SAM fold X953_08755 PF00476 DNA polymerase family A X953_08765 PF01121 Dephospho-CoA kinase X953_08770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain X953_08770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain X953_08775 PF02675 S-adenosylmethionine decarboxylase X953_08785 PF03477 ATP cone domain X953_08790 PF07261 Replication initiation and membrane attachment X953_08795 PF01695 IstB-like ATP binding protein X953_08795 PF07319 Primosomal protein DnaI N-terminus X953_08800 PF08812 YtxC-like family X953_08805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X953_08805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X953_08805 PF03129 Anticodon binding domain X953_08805 PF02824 TGS domain X953_08810 PF05198 Translation initiation factor IF-3, N-terminal domain X953_08810 PF00707 Translation initiation factor IF-3, C-terminal domain X953_08815 PF01632 Ribosomal protein L35 X953_08820 PF00453 Ribosomal protein L20 X953_08830 PF09335 SNARE associated Golgi protein X953_08845 PF05343 M42 glutamyl aminopeptidase X953_08850 PF01464 Transglycosylase SLT domain X953_08855 PF00005 ABC transporter X953_08875 PF14098 Small, acid-soluble spore protein I X953_08880 PF08032 RNA 2'-O ribose methyltransferase substrate binding X953_08880 PF00588 SpoU rRNA Methylase family X953_08890 PF03483 B3/4 domain X953_08890 PF03484 tRNA synthetase B5 domain X953_08890 PF03147 Ferredoxin-fold anticodon binding domain X953_08890 PF01588 Putative tRNA binding domain X953_08890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain X953_08895 PF01351 Ribonuclease HII X953_08895 PF11858 Domain of unknown function (DUF3378) X953_08900 PF05164 Cell division protein ZapA X953_08905 PF02674 Colicin V production protein X953_08910 PF02811 PHP domain X953_08910 PF14791 DNA polymerase beta thumb X953_08910 PF14716 Helix-hairpin-helix domain X953_08915 PF01713 Smr domain X953_08915 PF00488 MutS domain V X953_08920 PF03994 Domain of Unknown Function (DUF350) X953_08930 PF13193 AMP-binding enzyme C-terminal domain X953_08930 PF00501 AMP-binding enzyme X953_08935 PF00440 Bacterial regulatory proteins, tetR family X953_08935 PF08359 YsiA-like protein, C-terminal region X953_08940 PF00378 Enoyl-CoA hydratase/isomerase X953_08945 PF01012 Electron transfer flavoprotein domain X953_08950 PF00766 Electron transfer flavoprotein FAD-binding domain X953_08950 PF01012 Electron transfer flavoprotein domain X953_08955 PF00085 Thioredoxin X953_08960 PF08459 UvrC Helix-hairpin-helix N-terminal X953_08960 PF01541 GIY-YIG catalytic domain X953_08960 PF02151 UvrB/uvrC motif X953_08965 PF10702 Protein of unknown function (DUF2507) X953_08970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit X953_08975 PF02910 Fumarate reductase flavoprotein C-term X953_08975 PF00890 FAD binding domain X953_08980 PF13183 4Fe-4S dicluster domain X953_08980 PF13085 2Fe-2S iron-sulfur cluster binding domain X953_08985 PF03061 Thioesterase superfamily X953_08990 PF00196 Bacterial regulatory proteins, luxR family X953_08995 PF01047 MarR family X953_09000 PF01177 Asp/Glu/Hydantoin racemase X953_09005 PF10646 Sporulation and spore germination X953_09010 PF03725 3' exoribonuclease family, domain 2 X953_09010 PF01138 3' exoribonuclease family, domain 1 X953_09015 PF01725 Ham1 family X953_09020 PF12850 Calcineurin-like phosphoesterase superfamily domain X953_09040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase X953_09040 PF05697 Bacterial trigger factor protein (TF) X953_09040 PF05698 Bacterial trigger factor protein (TF) C-terminus X953_09045 PF06689 ClpX C4-type zinc finger X953_09045 PF10431 C-terminal, D2-small domain, of ClpB protein X953_09045 PF07724 AAA domain (Cdc48 subfamily) X953_09050 PF02190 ATP-dependent protease La (LON) substrate-binding domain X953_09050 PF05362 Lon protease (S16) C-terminal proteolytic domain X953_09050 PF00004 ATPase family associated with various cellular activities (AAA) X953_09055 PF01926 50S ribosome-binding GTPase X953_09060 PF00497 Bacterial extracellular solute-binding proteins, family 3 X953_09070 PF00005 ABC transporter X953_09080 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain X953_09080 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain X953_09080 PF01488 Shikimate / quinate 5-dehydrogenase X953_09085 PF01578 Cytochrome C assembly protein X953_09090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain X953_09090 PF03900 Porphobilinogen deaminase, C-terminal domain X953_09100 PF00490 Delta-aminolevulinic acid dehydratase X953_09105 PF00202 Aminotransferase class-III X953_09110 PF01476 LysM domain X953_09110 PF01476 LysM domain X953_09125 PF08264 Anticodon-binding domain of tRNA X953_09125 PF00133 tRNA synthetases class I (I, L, M and V) X953_09125 PF10458 Valyl tRNA synthetase tRNA binding arm X953_09140 PF08245 Mur ligase middle domain X953_09140 PF02875 Mur ligase family, glutamate ligase domain X953_09150 PF04002 RadC-like JAB domain X953_09165 PF04085 rod shape-determining protein MreC X953_09175 PF03775 Septum formation inhibitor MinC, C-terminal domain X953_09180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain X953_09190 PF02163 Peptidase family M50 X953_09195 PF00829 Ribosomal prokaryotic L21 protein X953_09200 PF04327 Cysteine protease Prp X953_09205 PF01016 Ribosomal L27 protein X953_09215 PF01926 50S ribosome-binding GTPase X953_09215 PF01018 GTP1/OBG X953_09215 PF09269 Domain of unknown function (DUF1967) X953_09220 PF01842 ACT domain X953_09220 PF00800 Prephenate dehydratase X953_09225 PF01476 LysM domain X953_09235 PF02540 NAD synthase X953_09245 PF01709 Transcriptional regulator X953_09250 PF07499 RuvA, C-terminal domain X953_09250 PF01330 RuvA N terminal domain X953_09255 PF05491 RuvB C-terminal winged helix domain X953_09255 PF17864 RuvB AAA lid domain X953_09255 PF05496 Holliday junction DNA helicase RuvB P-loop domain X953_09265 PF02547 Queuosine biosynthesis protein X953_09270 PF01702 Queuine tRNA-ribosyltransferase X953_09275 PF02699 Preprotein translocase subunit X953_09285 PF03600 Citrate transporter X953_09290 PF01943 Polysaccharide biosynthesis protein X953_09290 PF14667 Polysaccharide biosynthesis C-terminal domain X953_09300 PF07549 SecD/SecF GG Motif X953_09300 PF02355 Protein export membrane protein X953_09305 PF06305 Lipopolysaccharide assembly protein A domain X953_09310 PF17768 RecJ OB domain X953_09310 PF01368 DHH family X953_09310 PF02272 DHHA1 domain X953_09310 PF10141 Single-strand DNA-specific exonuclease, C terminal domain X953_09315 PF00156 Phosphoribosyl transferase domain X953_09320 PF13291 ACT domain X953_09320 PF02824 TGS domain X953_09320 PF04607 Region found in RelA / SpoT proteins X953_09325 PF02580 D-Tyr-tRNA(Tyr) deacylase X953_09330 PF08239 Bacterial SH3 domain X953_09330 PF01520 N-acetylmuramoyl-L-alanine amidase X953_09340 PF13393 Histidyl-tRNA synthetase X953_09340 PF03129 Anticodon binding domain X953_09345 PF00152 tRNA synthetases class II (D, K and N) X953_09345 PF01336 OB-fold nucleic acid binding domain X953_09345 PF02938 GAD domain X953_09355 PF16193 AAA C-terminal domain X953_09355 PF05496 Holliday junction DNA helicase RuvB P-loop domain X953_09355 PF12002 MgsA AAA+ ATPase C terminal X953_09360 PF02082 Transcriptional regulator X953_09365 PF00266 Aminotransferase class-V X953_09380 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain X953_09380 PF14490 Helix-hairpin-helix containing domain X953_09380 PF13538 UvrD-like helicase C-terminal domain X953_09395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X953_09395 PF02272 DHHA1 domain X953_09395 PF01411 tRNA synthetases class II (A) X953_09400 PF06135 IreB regulatory phosphoprotein X953_09405 PF03652 Holliday junction resolvase X953_09410 PF06949 Protein of unknown function (DUF1292) X953_09420 PF02618 YceG-like family X953_09430 PF00485 Phosphoribulokinase / Uridine kinase family X953_09435 PF01272 Transcription elongation factor, GreA/GreB, C-term X953_09435 PF03449 Transcription elongation factor, N-terminal X953_09440 PF07423 Domain of unknown function (DUF1510) X953_09445 PF01048 Phosphorylase superfamily X953_09455 PF04545 Sigma-70, region 4 X953_09455 PF04542 Sigma-70 region 2 X953_09465 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) X953_09475 PF00361 Proton-conducting membrane transporter X953_09485 PF13244 Domain of unknown function (DUF4040) X953_09485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus X953_09485 PF00361 Proton-conducting membrane transporter X953_09490 PF08970 Sporulation inhibitor A X953_09500 PF01926 50S ribosome-binding GTPase X953_09505 PF01488 Shikimate / quinate 5-dehydrogenase X953_09505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain X953_09505 PF08501 Shikimate dehydrogenase substrate binding domain X953_09510 PF01985 CRS1 / YhbY (CRM) domain X953_09515 PF01467 Cytidylyltransferase-like X953_09520 PF01966 HD domain X953_09530 PF13649 Methyltransferase domain X953_09535 PF10531 SLBB domain X953_09540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region X953_09545 PF00753 Metallo-beta-lactamase superfamily X953_09545 PF03772 Competence protein X953_09545 PF13567 Domain of unknown function (DUF4131) X953_09550 PF14141 YqzM-like protein X953_09555 PF06144 DNA polymerase III, delta subunit X953_09560 PF01649 Ribosomal protein S20 X953_09565 PF03418 Germination protease X953_09570 PF07454 Stage II sporulation protein P (SpoIIP) X953_09580 PF06421 GTP-binding protein LepA C-terminus X953_09580 PF03144 Elongation factor Tu domain 2 X953_09580 PF00009 Elongation factor Tu GTP binding domain X953_09580 PF14492 Elongation Factor G, domain II X953_09580 PF00679 Elongation factor G C-terminus X953_09585 PF06969 HemN C-terminal domain X953_09585 PF04055 Radical SAM superfamily X953_09590 PF01628 HrcA protein C terminal domain X953_09595 PF01025 GrpE X953_09600 PF00012 Hsp70 protein X953_09605 PF00226 DnaJ domain X953_09605 PF01556 DnaJ C terminal domain X953_09605 PF00684 DnaJ central domain X953_09615 PF04452 RNA methyltransferase X953_09620 PF01938 TRAM domain X953_09620 PF00919 Uncharacterized protein family UPF0004 X953_09620 PF04055 Radical SAM superfamily X953_09625 PF01791 DeoC/LacD family aldolase X953_09630 PF01165 Ribosomal protein S21 X953_09635 PF09424 Yqey-like protein X953_09640 PF01972 Serine dehydrogenase proteinase X953_09640 PF01957 NfeD-like C-terminal, partner-binding X953_09645 PF12127 SigmaW regulon antibacterial X953_09655 PF07873 YabP family X953_09665 PF02562 PhoH-like protein X953_09670 PF01966 HD domain X953_09670 PF07698 7TM receptor with intracellular HD hydrolase X953_09670 PF07697 7TM-HD extracellular X953_09675 PF02130 Uncharacterized protein family UPF0054 X953_09685 PF01926 50S ribosome-binding GTPase X953_09685 PF07650 KH domain X953_09690 PF14006 YqzL-like protein X953_09695 PF02565 Recombination protein O C terminal X953_09695 PF11967 Recombination protein O N terminal X953_09705 PF02091 Glycyl-tRNA synthetase alpha subunit X953_09710 PF05746 DALR anticodon binding domain X953_09710 PF02092 Glycyl-tRNA synthetase beta subunit X953_09715 PF00571 CBS domain X953_09715 PF08279 HTH domain X953_09720 PF03618 Kinase/pyrophosphorylase X953_09725 PF01807 CHC2 zinc finger X953_09725 PF08275 DNA primase catalytic core, N-terminal domain X953_09725 PF10410 DnaB-helicase binding domain of primase X953_09730 PF03979 Sigma-70 factor, region 1.1 X953_09730 PF00140 Sigma-70 factor, region 1.2 X953_09730 PF04542 Sigma-70 region 2 X953_09730 PF04545 Sigma-70, region 4 X953_09730 PF04539 Sigma-70 region 3 X953_09740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X953_09745 PF04816 tRNA (adenine(22)-N(1))-methyltransferase X953_09750 PF01784 NIF3 (NGG1p interacting factor 3) X953_09755 PF00270 DEAD/DEAH box helicase X953_09755 PF00271 Helicase conserved C-terminal domain X953_09760 PF01261 Xylose isomerase-like TIM barrel X953_09765 PF11116 Protein of unknown function (DUF2624) X953_09820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain X953_09820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain X953_09825 PF07690 Major Facilitator Superfamily X953_09845 PF00471 Ribosomal protein L33 X953_09850 PF01812 5-formyltetrahydrofolate cyclo-ligase family X953_09855 PF00899 ThiF family X953_09860 PF01694 Rhomboid family X953_09870 PF03323 Bacillus/Clostridium GerA spore germination protein X953_09880 PF00480 ROK family X953_09890 PF00753 Metallo-beta-lactamase superfamily X953_09895 PF11117 Protein of unknown function (DUF2626) X953_10055 PF06605 Prophage endopeptidase tail X953_10110 PF00589 Phage integrase family X953_10195 PF00239 Resolvase, N terminal domain X953_10200 PF07963 Prokaryotic N-terminal methylation motif X953_10210 PF00437 Type II/IV secretion system protein X953_10215 PF14038 YqzE-like protein X953_10220 PF11079 Bacterial protein YqhG of unknown function X953_10225 PF00176 SNF2 family N-terminal domain X953_10225 PF00271 Helicase conserved C-terminal domain X953_10235 PF08669 Glycine cleavage T-protein C-terminal barrel domain X953_10235 PF01571 Aminomethyltransferase folate-binding domain X953_10240 PF02347 Glycine cleavage system P-protein X953_10245 PF02347 Glycine cleavage system P-protein X953_10250 PF00581 Rhodanese-like domain X953_10255 PF00317 Ribonucleotide reductase, all-alpha domain X953_10255 PF03477 ATP cone domain X953_10255 PF02867 Ribonucleotide reductase, barrel domain X953_10260 PF02742 Iron dependent repressor, metal binding and dimerisation domain X953_10260 PF01325 Iron dependent repressor, N-terminal DNA binding domain X953_10265 PF01734 Patatin-like phospholipase X953_10275 PF11085 Conserved membrane protein YqhR X953_10280 PF00557 Metallopeptidase family M24 X953_10280 PF01321 Creatinase/Prolidase N-terminal domain X953_10285 PF08207 Elongation factor P (EF-P) KOW-like domain X953_10285 PF01132 Elongation factor P (EF-P) OB domain X953_10285 PF09285 Elongation factor P, C-terminal X953_10295 PF09548 Stage III sporulation protein AB (spore_III_AB) X953_10300 PF06686 Stage III sporulation protein AC/AD protein family X953_10305 PF06686 Stage III sporulation protein AC/AD protein family X953_10310 PF09546 Stage III sporulation protein AE (spore_III_AE) X953_10315 PF09581 Stage III sporulation protein AF (Spore_III_AF) X953_10325 PF12685 SpoIIIAH-like protein X953_10330 PF00364 Biotin-requiring enzyme X953_10335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X953_10335 PF00289 Biotin carboxylase, N-terminal domain X953_10335 PF02785 Biotin carboxylase C-terminal domain X953_10340 PF03780 Asp23 family, cell envelope-related function X953_10345 PF01029 NusB family X953_10350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain X953_10350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain X953_10355 PF13742 OB-fold nucleic acid binding domain X953_10355 PF02601 Exonuclease VII, large subunit X953_10360 PF02609 Exonuclease VII small subunit X953_10365 PF00348 Polyprenyl synthetase X953_10375 PF01728 FtsJ-like methyltransferase X953_10375 PF01479 S4 domain X953_10380 PF02863 Arginine repressor, C-terminal domain X953_10380 PF01316 Arginine repressor, DNA binding domain X953_10385 PF13476 AAA domain X953_10390 PF17820 PDZ domain X953_10390 PF05580 SpoIVB peptidase S55 X953_10395 PF00072 Response regulator receiver domain X953_10395 PF08769 Sporulation initiation factor Spo0A C terminal X953_10400 PF13840 ACT domain X953_10400 PF00696 Amino acid kinase family X953_10410 PF02954 Bacterial regulatory protein, Fis family X953_10410 PF00989 PAS fold X953_10410 PF00158 Sigma-54 interaction domain X953_10415 PF01515 Phosphate acetyl/butaryl transferase X953_10420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain X953_10420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X953_10430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X953_10430 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_10435 PF00676 Dehydrogenase E1 component X953_10440 PF02780 Transketolase, C-terminal domain X953_10440 PF02779 Transketolase, pyrimidine binding domain X953_10445 PF02817 e3 binding domain X953_10445 PF00364 Biotin-requiring enzyme X953_10445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) X953_10450 PF06491 Disulphide isomerase X953_10455 PF11728 Putative aromatic acid exporter C-terminal domain X953_10455 PF06081 Aromatic acid exporter family member 1 X953_10475 PF01039 Carboxyl transferase domain X953_10480 PF01546 Peptidase family M20/M25/M40 X953_10480 PF07687 Peptidase dimerisation domain X953_10485 PF00817 impB/mucB/samB family X953_10485 PF11798 IMS family HHH motif X953_10485 PF11799 impB/mucB/samB family C-terminal domain X953_10490 PF00171 Aldehyde dehydrogenase family X953_10495 PF00753 Metallo-beta-lactamase superfamily X953_10500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family X953_10505 PF03009 Glycerophosphoryl diester phosphodiesterase family X953_10510 PF01546 Peptidase family M20/M25/M40 X953_10515 PF00753 Metallo-beta-lactamase superfamily X953_10520 PF00106 short chain dehydrogenase X953_10530 PF00248 Aldo/keto reductase family X953_10535 PF00293 NUDIX domain X953_10545 PF01944 Stage II sporulation protein M X953_10550 PF01475 Ferric uptake regulator family X953_10555 PF14004 Protein of unknown function (DUF4227) X953_10560 PF00589 Phage integrase family X953_10560 PF02899 Phage integrase, N-terminal SAM-like domain X953_10565 PF01676 Metalloenzyme superfamily X953_10570 PF01048 Phosphorylase superfamily X953_10575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain X953_10575 PF00591 Glycosyl transferase family, a/b domain X953_10575 PF02885 Glycosyl transferase family, helical bundle domain X953_10585 PF00768 D-alanyl-D-alanine carboxypeptidase X953_10585 PF07943 Penicillin-binding protein 5, C-terminal domain X953_10590 PF01740 STAS domain X953_10595 PF13581 Histidine kinase-like ATPase domain X953_10600 PF04542 Sigma-70 region 2 X953_10600 PF04539 Sigma-70 region 3 X953_10600 PF04545 Sigma-70, region 4 X953_10605 PF12164 Stage V sporulation protein AA X953_10610 PF13782 Stage V sporulation protein AB X953_10615 PF03323 Bacillus/Clostridium GerA spore germination protein X953_10620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain X953_10620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain X953_10625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD X953_10630 PF17820 PDZ domain X953_10630 PF02163 Peptidase family M50 X953_10635 PF00583 Acetyltransferase (GNAT) family X953_10645 PF02616 Segregation and condensation protein ScpA X953_10650 PF04079 Segregation and condensation complex subunit ScpB X953_10655 PF00768 D-alanyl-D-alanine carboxypeptidase X953_10655 PF07943 Penicillin-binding protein 5, C-terminal domain X953_10660 PF07670 Nucleoside recognition X953_10665 PF07670 Nucleoside recognition X953_10670 PF00849 RNA pseudouridylate synthase X953_10670 PF01479 S4 domain X953_10675 PF00578 AhpC/TSA family X953_10680 PF05140 ResB-like family X953_10685 PF01578 Cytochrome C assembly protein X953_10690 PF00486 Transcriptional regulatory protein, C terminal X953_10690 PF00072 Response regulator receiver domain X953_10695 PF00989 PAS fold X953_10695 PF18698 Histidine kinase sensor domain X953_10695 PF00672 HAMP domain X953_10695 PF00512 His Kinase A (phospho-acceptor) domain X953_10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_10710 PF14493 Helix-turn-helix domain X953_10715 PF00271 Helicase conserved C-terminal domain X953_10715 PF00270 DEAD/DEAH box helicase X953_10720 PF02517 CPBP intramembrane metalloprotease X953_10730 PF00149 Calcineurin-like phosphoesterase X953_10735 PF05389 Negative regulator of genetic competence (MecA) X953_10740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X953_10740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain X953_10750 PF17763 Glutaminase/Asparaginase C-terminal domain X953_10750 PF00710 Asparaginase, N-terminal X953_10755 PF13367 PrsW family intramembrane metalloprotease X953_10760 PF01471 Putative peptidoglycan binding domain X953_10760 PF07486 Cell Wall Hydrolase X953_10765 PF14620 YpeB sporulation X953_10765 PF03413 Peptidase propeptide and YPEB domain X953_10780 PF02224 Cytidylate kinase X953_10790 PF00575 S1 RNA binding domain X953_10800 PF14045 YIEGIA protein X953_10810 PF01926 50S ribosome-binding GTPase X953_10810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal X953_10815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus X953_10815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus X953_10835 PF09547 Stage IV sporulation protein A (spore_IV_A) X953_10840 PF00216 Bacterial DNA-binding protein X953_10845 PF02081 Tryptophan RNA-binding attenuator protein X953_10850 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 X953_10855 PF01209 ubiE/COQ5 methyltransferase family X953_10860 PF00348 Polyprenyl synthetase X953_10865 PF00334 Nucleoside diphosphate kinase X953_10875 PF03705 CheR methyltransferase, all-alpha domain X953_10875 PF01739 CheR methyltransferase, SAM binding domain X953_10880 PF01264 Chorismate synthase X953_10885 PF01761 3-dehydroquinate synthase X953_10890 PF07736 Chorismate mutase type I X953_10895 PF00155 Aminotransferase class I and II X953_10900 PF02153 Prephenate dehydrogenase X953_10900 PF01842 ACT domain X953_10905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X953_10915 PF08858 IDEAL domain X953_10915 PF08864 UPF0302 domain X953_10920 PF10673 Protein of unknown function (DUF2487) X953_10925 PF00355 Rieske [2Fe-2S] domain X953_10930 PF00033 Cytochrome b/b6/petB X953_10935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X953_10935 PF00032 Cytochrome b(C-terminal)/b6/petD X953_10940 PF07187 Protein of unknown function (DUF1405) X953_10950 PF04298 Putative neutral zinc metallopeptidase X953_10955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_10955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_10960 PF03819 MazG nucleotide pyrophosphohydrolase domain X953_10965 PF01113 Dihydrodipicolinate reductase, N-terminus X953_10965 PF05173 Dihydrodipicolinate reductase, C-terminus X953_10970 PF02142 MGS-like domain X953_10975 PF13439 Glycosyltransferase Family 4 X953_10975 PF00534 Glycosyl transferases group 1 X953_10980 PF13735 tRNA nucleotidyltransferase domain 2 putative X953_10980 PF12627 Probable RNA and SrmB- binding site of polymerase A X953_10980 PF01743 Poly A polymerase head domain X953_10985 PF02237 Biotin protein ligase C terminal domain X953_10985 PF03099 Biotin/lipoate A/B protein ligase family X953_10985 PF08279 HTH domain X953_10990 PF02548 Ketopantoate hydroxymethyltransferase X953_10995 PF02569 Pantoate-beta-alanine ligase X953_11000 PF02261 Aspartate decarboxylase X953_11005 PF04851 Type III restriction enzyme, res subunit X953_11005 PF13307 Helicase C-terminal domain X953_11005 PF00929 Exonuclease X953_11010 PF14084 Protein of unknown function (DUF4264) X953_11020 PF00155 Aminotransferase class I and II X953_11025 PF00152 tRNA synthetases class II (D, K and N) X953_11025 PF01336 OB-fold nucleic acid binding domain X953_11030 PF07261 Replication initiation and membrane attachment X953_11035 PF00730 HhH-GPD superfamily base excision DNA repair protein X953_11035 PF00633 Helix-hairpin-helix motif X953_11035 PF10576 Iron-sulfur binding domain of endonuclease III X953_11040 PF00905 Penicillin binding protein transpeptidase domain X953_11040 PF00912 Transglycosylase X953_11045 PF03838 Recombination protein U X953_11050 PF10720 Protein of unknown function (DUF2515) X953_11070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region X953_11075 PF05103 DivIVA protein X953_11085 PF02926 THUMP domain X953_11085 PF01170 Putative RNA methylase family UPF0020 X953_11090 PF02074 Carboxypeptidase Taq (M32) metallopeptidase X953_11095 PF00195 Chalcone and stilbene synthases, N-terminal domain X953_11095 PF02797 Chalcone and stilbene synthases, C-terminal domain X953_11100 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family X953_11110 PF00115 Cytochrome C and Quinol oxidase polypeptide I X953_11115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X953_11115 PF09125 Cytochrome C oxidase subunit II, transmembrane X953_11130 PF02592 Putative vitamin uptake transporter X953_11135 PF00313 'Cold-shock' DNA-binding domain X953_11140 PF01268 Formate--tetrahydrofolate ligase X953_11145 PF01966 HD domain X953_11150 PF00877 NlpC/P60 family X953_11150 PF01476 LysM domain X953_11155 PF00303 Thymidylate synthase X953_11160 PF00186 Dihydrofolate reductase X953_11165 PF12804 MobA-like NTP transferase domain X953_11170 PF02416 mttA/Hcf106 family X953_11175 PF02416 mttA/Hcf106 family X953_11180 PF00902 Sec-independent protein translocase protein (TatC) X953_11185 PF06855 YozE SAM-like fold X953_11190 PF08863 YolD-like protein X953_11200 PF01625 Peptide methionine sulfoxide reductase X953_11200 PF01641 SelR domain X953_11210 PF00246 Zinc carboxypeptidase X953_11210 PF01476 LysM domain X953_11215 PF00037 4Fe-4S binding domain X953_11220 PF00708 Acylphosphatase X953_11240 PF00384 Molybdopterin oxidoreductase X953_11240 PF01568 Molydopterin dinucleotide binding domain X953_11240 PF14710 Respiratory nitrate reductase alpha N-terminal X953_11245 PF14711 Respiratory nitrate reductase beta C-terminal X953_11245 PF13247 4Fe-4S dicluster domain X953_11255 PF02665 Nitrate reductase gamma subunit X953_11260 PF00355 Rieske [2Fe-2S] domain X953_11260 PF01266 FAD dependent oxidoreductase X953_11265 PF00291 Pyridoxal-phosphate dependent enzyme X953_11275 PF00355 Rieske [2Fe-2S] domain X953_11275 PF01266 FAD dependent oxidoreductase X953_11280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain X953_11280 PF01367 5'-3' exonuclease, C-terminal SAM fold X953_11285 PF00350 Dynamin family X953_11290 PF01613 Flavin reductase like domain X953_11295 PF01039 Carboxyl transferase domain X953_11300 PF00378 Enoyl-CoA hydratase/isomerase X953_11305 PF00364 Biotin-requiring enzyme X953_11310 PF02785 Biotin carboxylase C-terminal domain X953_11310 PF00289 Biotin carboxylase, N-terminal domain X953_11310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X953_11315 PF13193 AMP-binding enzyme C-terminal domain X953_11315 PF00501 AMP-binding enzyme X953_11320 PF02770 Acyl-CoA dehydrogenase, middle domain X953_11320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_11320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_11325 PF00440 Bacterial regulatory proteins, tetR family X953_11330 PF00521 DNA gyrase/topoisomerase IV, subunit A X953_11330 PF03989 DNA gyrase C-terminal domain, beta-propeller X953_11335 PF00204 DNA gyrase B X953_11335 PF00986 DNA gyrase B subunit, carboxyl terminus X953_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_11335 PF01751 Toprim domain X953_11340 PF13380 CoA binding domain X953_11345 PF00528 Binding-protein-dependent transport system inner membrane component X953_11350 PF00571 CBS domain X953_11350 PF00005 ABC transporter X953_11355 PF02660 Glycerol-3-phosphate acyltransferase X953_11360 PF02649 Type I GTP cyclohydrolase folE2 X953_11365 PF01809 Putative membrane protein insertion efficiency factor X953_11375 PF03061 Thioesterase superfamily X953_11385 PF00578 AhpC/TSA family X953_11395 PF00694 Aconitase C-terminal domain X953_11395 PF00330 Aconitase family (aconitate hydratase) X953_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_11400 PF00512 His Kinase A (phospho-acceptor) domain X953_11400 PF00989 PAS fold X953_11400 PF08447 PAS fold X953_11405 PF11084 Protein of unknown function (DUF2621) X953_11410 PF07301 Protein of unknown function (DUF1453) X953_11415 PF00072 Response regulator receiver domain X953_11420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter X953_11425 PF02683 Cytochrome C biogenesis protein transmembrane region X953_11430 PF03672 Uncharacterised protein family (UPF0154) X953_11440 PF02779 Transketolase, pyrimidine binding domain X953_11440 PF00456 Transketolase, thiamine diphosphate binding domain X953_11440 PF02780 Transketolase, C-terminal domain X953_11445 PF05979 Bacterial protein of unknown function (DUF896) X953_11450 PF00239 Resolvase, N terminal domain X953_11460 PF01726 LexA DNA binding domain X953_11460 PF00717 Peptidase S24-like X953_11465 PF03951 Glutamine synthetase, beta-Grasp domain X953_11465 PF00120 Glutamine synthetase, catalytic domain X953_11470 PF13411 MerR HTH family regulatory protein X953_11475 PF06838 Methionine gamma-lyase X953_11480 PF16360 GTP-binding GTPase Middle Region X953_11480 PF13167 GTP-binding GTPase N-terminal X953_11480 PF01926 50S ribosome-binding GTPase X953_11485 PF17866 AAA lid domain X953_11485 PF00004 ATPase family associated with various cellular activities (AAA) X953_11495 PF17209 Hfq protein X953_11505 PF00210 Ferritin-like domain X953_11510 PF08676 MutL C terminal dimerisation domain X953_11510 PF01119 DNA mismatch repair protein, C-terminal domain X953_11515 PF00488 MutS domain V X953_11515 PF05192 MutS domain III X953_11515 PF05188 MutS domain II X953_11515 PF01624 MutS domain I X953_11515 PF05190 MutS family domain IV X953_11520 PF10628 Outer spore coat protein E (CotE) X953_11525 PF06133 Control of competence regulator ComK, YlbF/YmcA X953_11530 PF00919 Uncharacterized protein family UPF0004 X953_11530 PF04055 Radical SAM superfamily X953_11530 PF01938 TRAM domain X953_11535 PF04232 Stage V sporulation protein S (SpoVS) X953_11540 PF13277 YmdB-like protein X953_11545 PF00013 KH domain X953_11545 PF01966 HD domain X953_11545 PF12072 Domain of unknown function (DUF3552) X953_11550 PF00154 recA bacterial DNA recombination protein X953_11555 PF18146 Damage-inducible protein CinA KH domain X953_11555 PF02464 Competence-damaged protein X953_11555 PF00994 Probable molybdopterin binding domain X953_11560 PF01066 CDP-alcohol phosphatidyltransferase X953_11565 PF13464 Domain of unknown function (DUF4115) X953_11570 PF11868 Protein of unknown function (DUF3388) X953_11575 PF11588 Protein of unknown function (DUF3243) X953_11585 PF00675 Insulinase (Peptidase family M16) X953_11585 PF05193 Peptidase M16 inactive domain X953_11590 PF05193 Peptidase M16 inactive domain X953_11615 PF00392 Bacterial regulatory proteins, gntR family X953_11615 PF07702 UTRA domain X953_11620 PF17854 FtsK alpha domain X953_11620 PF09397 Ftsk gamma domain X953_11620 PF01580 FtsK/SpoIIIE family X953_11630 PF00574 Clp protease X953_11635 PF00701 Dihydrodipicolinate synthetase family X953_11640 PF13840 ACT domain X953_11640 PF00696 Amino acid kinase family X953_11645 PF02774 Semialdehyde dehydrogenase, dimerisation domain X953_11645 PF01118 Semialdehyde dehydrogenase, NAD binding domain X953_11650 PF02441 Flavoprotein X953_11655 PF16924 Dipicolinate synthase subunit A N-terminal domain X953_11655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain X953_11660 PF05239 PRC-barrel domain X953_11675 PF05193 Peptidase M16 inactive domain X953_11675 PF00675 Insulinase (Peptidase family M16) X953_11680 PF01522 Polysaccharide deacetylase X953_11695 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain X953_11695 PF01138 3' exoribonuclease family, domain 1 X953_11695 PF00013 KH domain X953_11695 PF03725 3' exoribonuclease family, domain 2 X953_11695 PF00575 S1 RNA binding domain X953_11700 PF00312 Ribosomal protein S15 X953_11705 PF01687 Riboflavin kinase X953_11705 PF06574 FAD synthetase X953_11710 PF16198 tRNA pseudouridylate synthase B C-terminal domain X953_11710 PF01509 TruB family pseudouridylate synthase (N terminal domain) X953_11715 PF02033 Ribosome-binding factor A X953_11725 PF00009 Elongation factor Tu GTP binding domain X953_11725 PF11987 Translation-initiation factor 2 X953_11725 PF04760 Translation initiation factor IF-2, N-terminal region X953_11730 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family X953_11735 PF04296 Protein of unknown function (DUF448) X953_11740 PF00575 S1 RNA binding domain X953_11740 PF08529 NusA N-terminal domain X953_11740 PF13184 NusA-like KH domain X953_11745 PF02576 RimP N-terminal domain X953_11745 PF17384 RimP C-terminal SH3 domain X953_11750 PF08678 Rsbr N terminal X953_11750 PF01740 STAS domain X953_11755 PF14579 Helix-hairpin-helix motif X953_11755 PF02811 PHP domain X953_11755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X953_11755 PF00929 Exonuclease X953_11755 PF01336 OB-fold nucleic acid binding domain X953_11755 PF07733 Bacterial DNA polymerase III alpha NTPase domain X953_11755 PF11490 DNA polymerase III polC-type N-terminus II X953_11755 PF14480 DNA polymerase III polC-type N-terminus I X953_11760 PF02163 Peptidase family M50 X953_11760 PF17820 PDZ domain X953_11770 PF01255 Putative undecaprenyl diphosphate synthase X953_11780 PF01765 Ribosome recycling factor X953_11785 PF00696 Amino acid kinase family X953_11790 PF00889 Elongation factor TS X953_11795 PF00318 Ribosomal protein S2 X953_11820 PF04545 Sigma-70, region 4 X953_11820 PF04539 Sigma-70 region 3 X953_11820 PF04542 Sigma-70 region 2 X953_11825 PF03975 CheD chemotactic sensory transduction X953_11830 PF04509 CheC-like family X953_11835 PF01584 CheW-like domain X953_11840 PF00072 Response regulator receiver domain X953_11840 PF01339 CheB methylesterase X953_11845 PF10609 NUBPL iron-transfer P-loop NTPase X953_11850 PF00448 SRP54-type protein, GTPase domain X953_11855 PF00771 FHIPEP family X953_11860 PF01312 FlhB HrpN YscU SpaS Family X953_11865 PF01311 Bacterial export proteins, family 1 X953_11870 PF01313 Bacterial export proteins, family 3 X953_11875 PF00813 FliP family X953_11880 PF04347 Flagellar biosynthesis protein, FliO X953_11885 PF00072 Response regulator receiver domain X953_11890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term X953_11890 PF04509 CheC-like family X953_11895 PF02154 Flagellar motor switch protein FliM X953_11895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term X953_11900 PF03748 Flagellar basal body-associated protein FliL X953_11905 PF06289 Flagellar and Swarming motility proteins X953_11910 PF00460 Flagella basal body rod protein X953_11910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X953_11920 PF03963 Flagellar hook capping protein - N-terminal region X953_11940 PF18269 T3SS EscN ATPase C-terminal domain X953_11940 PF02874 ATP synthase alpha/beta family, beta-barrel domain X953_11940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X953_11950 PF14841 FliG middle domain X953_11950 PF01706 FliG C-terminal domain X953_11950 PF14842 FliG N-terminal domain X953_11955 PF01514 Secretory protein of YscJ/FliF family X953_11955 PF08345 Flagellar M-ring protein C-terminal X953_11960 PF02049 Flagellar hook-basal body complex protein FliE X953_11965 PF00460 Flagella basal body rod protein X953_11965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X953_11970 PF00460 Flagella basal body rod protein X953_11975 PF06018 CodY GAF-like domain X953_11975 PF08222 CodY helix-turn-helix domain X953_11980 PF00004 ATPase family associated with various cellular activities (AAA) X953_11980 PF10431 C-terminal, D2-small domain, of ClpB protein X953_11980 PF07724 AAA domain (Cdc48 subfamily) X953_11985 PF00227 Proteasome subunit X953_11990 PF02899 Phage integrase, N-terminal SAM-like domain X953_11990 PF00589 Phage integrase family X953_12000 PF01751 Toprim domain X953_12000 PF01396 Topoisomerase DNA binding C4 zinc finger X953_12000 PF01131 DNA topoisomerase X953_12005 PF02481 DNA recombination-mediator protein A X953_12010 PF02629 CoA binding domain X953_12010 PF00549 CoA-ligase X953_12015 PF08442 ATP-grasp domain X953_12015 PF00549 CoA-ligase X953_12020 PF01312 FlhB HrpN YscU SpaS Family X953_12030 PF01351 Ribonuclease HII X953_12035 PF01926 50S ribosome-binding GTPase X953_12040 PF10502 Signal peptidase, peptidase S26 X953_12045 PF01245 Ribosomal protein L19 X953_12050 PF01746 tRNA (Guanine-1)-methyltransferase X953_12055 PF05239 PRC-barrel domain X953_12055 PF01782 RimM N-terminal domain X953_12070 PF00886 Ribosomal protein S16 X953_12075 PF02978 Signal peptide binding domain X953_12075 PF02881 SRP54-type protein, helical bundle domain X953_12075 PF00448 SRP54-type protein, GTPase domain X953_12080 PF04297 Putative helix-turn-helix protein, YlxM / p13 like X953_12085 PF00448 SRP54-type protein, GTPase domain X953_12085 PF02881 SRP54-type protein, helical bundle domain X953_12090 PF06470 SMC proteins Flexible Hinge Domain X953_12090 PF02463 RecF/RecN/SMC N terminal domain X953_12095 PF06569 Protein of unknown function (DUF1128) X953_12100 PF00035 Double-stranded RNA binding motif X953_12100 PF14622 Ribonuclease-III-like X953_12105 PF00550 Phosphopantetheine attachment site X953_12115 PF00698 Acyl transferase domain X953_12120 PF02504 Fatty acid synthesis protein X953_12130 PF17191 RecG wedge domain X953_12130 PF00270 DEAD/DEAH box helicase X953_12130 PF00271 Helicase conserved C-terminal domain X953_12135 PF03313 Serine dehydratase alpha chain X953_12140 PF03315 Serine dehydratase beta chain X953_12140 PF01842 ACT domain X953_12145 PF00860 Permease family X953_12150 PF13684 Dihydroxyacetone kinase family X953_12150 PF02734 DAK2 domain X953_12155 PF03780 Asp23 family, cell envelope-related function X953_12160 PF00830 Ribosomal L28 family X953_12165 PF08183 Stage V sporulation protein family X953_12170 PF04263 Thiamin pyrophosphokinase, catalytic domain X953_12170 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain X953_12175 PF00834 Ribulose-phosphate 3 epimerase family X953_12180 PF03193 RsgA GTPase X953_12180 PF16745 RsgA N-terminal domain X953_12185 PF03793 PASTA domain X953_12185 PF00069 Protein kinase domain X953_12195 PF01029 NusB family X953_12195 PF01189 16S rRNA methyltransferase RsmB/F X953_12200 PF02911 Formyl transferase, C-terminal domain X953_12200 PF00551 Formyl transferase X953_12205 PF04851 Type III restriction enzyme, res subunit X953_12205 PF17764 3′ DNA-binding domain (3′BD) X953_12205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain X953_12205 PF00271 Helicase conserved C-terminal domain X953_12205 PF18074 Primosomal protein N C-terminal domain X953_12210 PF04127 DNA / pantothenate metabolism flavoprotein X953_12210 PF02441 Flavoprotein X953_12215 PF01192 RNA polymerase Rpb6 X953_12220 PF00625 Guanylate kinase X953_12225 PF04025 Domain of unknown function (DUF370) X953_12230 PF00690 Cation transporter/ATPase, N-terminus X953_12230 PF00689 Cation transporting ATPase, C-terminus X953_12240 PF02566 OsmC-like protein X953_12245 PF03466 LysR substrate binding domain X953_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_12250 PF00156 Phosphoribosyl transferase domain X953_12255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family X953_12260 PF01180 Dihydroorotate dehydrogenase X953_12265 PF00970 Oxidoreductase FAD-binding domain X953_12265 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B X953_12270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X953_12270 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain X953_12270 PF02142 MGS-like domain X953_12275 PF00117 Glutamine amidotransferase class-I X953_12275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain X953_12280 PF01979 Amidohydrolase family X953_12285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain X953_12285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain X953_12290 PF00156 Phosphoribosyl transferase domain X953_12295 PF01479 S4 domain X953_12295 PF00849 RNA pseudouridylate synthase X953_12300 PF01252 Signal peptidase (SPase) II X953_12305 PF06827 Zinc finger found in FPG and IleRS X953_12305 PF00133 tRNA synthetases class I (I, L, M and V) X953_12305 PF08264 Anticodon-binding domain of tRNA X953_12310 PF05103 DivIVA protein X953_12315 PF17774 Putative RNA-binding domain in YlmH X953_12315 PF01479 S4 domain X953_12320 PF04472 Cell division protein SepF X953_12325 PF01168 Alanine racemase, N-terminal domain X953_12335 PF05239 PRC-barrel domain X953_12340 PF04545 Sigma-70, region 4 X953_12340 PF04539 Sigma-70 region 3 X953_12340 PF04542 Sigma-70 region 2 X953_12345 PF04545 Sigma-70, region 4 X953_12345 PF04542 Sigma-70 region 2 X953_12350 PF03419 Sporulation factor SpoIIGA X953_12355 PF12327 FtsZ family, C-terminal domain X953_12355 PF00091 Tubulin/FtsZ family, GTPase domain X953_12360 PF02491 SHS2 domain inserted in FTSA X953_12365 PF08478 POTRA domain, FtsQ-type X953_12370 PF01098 Cell cycle protein X953_12375 PF02875 Mur ligase family, glutamate ligase domain X953_12375 PF08245 Mur ligase middle domain X953_12380 PF00953 Glycosyl transferase family 4 X953_12385 PF02875 Mur ligase family, glutamate ligase domain X953_12385 PF01225 Mur ligase family, catalytic domain X953_12385 PF08245 Mur ligase middle domain X953_12390 PF02875 Mur ligase family, glutamate ligase domain X953_12390 PF01225 Mur ligase family, catalytic domain X953_12390 PF08245 Mur ligase middle domain X953_12395 PF03793 PASTA domain X953_12395 PF00905 Penicillin binding protein transpeptidase domain X953_12395 PF03717 Penicillin-binding Protein dimerisation domain X953_12405 PF04977 Septum formation initiator X953_12410 PF01795 MraW methylase family X953_12415 PF02381 MraZ protein, putative antitoxin-like X953_12420 PF10079 Bacillithiol biosynthesis BshC X953_12430 PF08546 Ketopantoate reductase PanE/ApbA C terminal X953_12430 PF02558 Ketopantoate reductase PanE/ApbA X953_12435 PF13508 Acetyltransferase (GNAT) domain X953_12445 PF00378 Enoyl-CoA hydratase/isomerase X953_12450 PF01783 Ribosomal L32p protein family X953_12460 PF05636 HIGH Nucleotidyl Transferase X953_12465 PF05362 Lon protease (S16) C-terminal proteolytic domain X953_12465 PF13180 PDZ domain X953_12470 PF07670 Nucleoside recognition X953_12475 PF01467 Cytidylyltransferase-like X953_12485 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) X953_12490 PF06133 Control of competence regulator ComK, YlbF/YmcA X953_12505 PF14504 CAP-associated N-terminal X953_12505 PF00188 Cysteine-rich secretory protein family X953_12510 PF08868 YugN-like family X953_12515 PF01594 AI-2E family transporter X953_12520 PF04238 Protein of unknown function (DUF420) X953_12525 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) X953_12530 PF03626 Prokaryotic Cytochrome C oxidase subunit IV X953_12535 PF00510 Cytochrome c oxidase subunit III X953_12540 PF00115 Cytochrome C and Quinol oxidase polypeptide I X953_12545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X953_12545 PF00034 Cytochrome c X953_12545 PF02790 Cytochrome C oxidase subunit II, transmembrane domain X953_12550 PF01040 UbiA prenyltransferase family X953_12555 PF02628 Cytochrome oxidase assembly protein X953_12560 PF00682 HMGL-like X953_12560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X953_12560 PF00364 Biotin-requiring enzyme X953_12560 PF02785 Biotin carboxylase C-terminal domain X953_12560 PF00289 Biotin carboxylase, N-terminal domain X953_12560 PF02436 Conserved carboxylase domain X953_12565 PF01098 Cell cycle protein X953_12570 PF07408 Protein of unknown function (DUF1507) X953_12580 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) X953_12590 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) X953_12595 PF14036 YlaH-like protein X953_12605 PF00459 Inositol monophosphatase family X953_12620 PF05256 Uncharacterised protein family (UPF0223) X953_12625 PF03060 Nitronate monooxygenase X953_12630 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain X953_12630 PF01276 Orn/Lys/Arg decarboxylase, major domain X953_12655 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_12655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X953_12660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) X953_12660 PF02817 e3 binding domain X953_12660 PF00364 Biotin-requiring enzyme X953_12665 PF02779 Transketolase, pyrimidine binding domain X953_12665 PF02780 Transketolase, C-terminal domain X953_12670 PF00676 Dehydrogenase E1 component X953_12675 PF10368 Putative cell-wall binding lipoprotein X953_12680 PF01327 Polypeptide deformylase X953_12695 PF00753 Metallo-beta-lactamase superfamily X953_12695 PF17770 Ribonuclease J C-terminal domain X953_12695 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain X953_12700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_12700 PF00205 Thiamine pyrophosphate enzyme, central domain X953_12700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_12705 PF02254 TrkA-N domain X953_12705 PF02080 TrkA-C domain X953_12710 PF00664 ABC transporter transmembrane region X953_12710 PF00005 ABC transporter X953_12715 PF00664 ABC transporter transmembrane region X953_12715 PF00005 ABC transporter X953_12720 PF00578 AhpC/TSA family X953_12725 PF00578 AhpC/TSA family X953_12725 PF10417 C-terminal domain of 1-Cys peroxiredoxin X953_12730 PF03698 Uncharacterised protein family (UPF0180) X953_12735 PF01546 Peptidase family M20/M25/M40 X953_12735 PF07687 Peptidase dimerisation domain X953_12740 PF00132 Bacterial transferase hexapeptide (six repeats) X953_12740 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal X953_12740 PF14602 Hexapeptide repeat of succinyl-transferase X953_12750 PF01022 Bacterial regulatory protein, arsR family X953_12755 PF16916 Dimerisation domain of Zinc Transporter X953_12755 PF01545 Cation efflux family X953_12765 PF10518 TAT (twin-arginine translocation) pathway signal sequence X953_12765 PF00149 Calcineurin-like phosphoesterase X953_12770 PF14177 YkyB-like protein X953_12785 PF00892 EamA-like transporter family X953_12790 PF04405 Domain of Unknown function (DUF542) X953_12790 PF01814 Hemerythrin HHE cation binding domain X953_12800 PF00155 Aminotransferase class I and II X953_12810 PF10502 Signal peptidase, peptidase S26 X953_12820 PF13180 PDZ domain X953_12820 PF17820 PDZ domain X953_12825 PF13556 PucR C-terminal helix-turn-helix domain X953_12825 PF17853 GGDEF-like domain X953_12825 PF05651 Putative sugar diacid recognition X953_12830 PF01266 FAD dependent oxidoreductase X953_12835 PF02423 Ornithine cyclodeaminase/mu-crystallin family X953_12840 PF00474 Sodium:solute symporter family X953_12845 PF02386 Cation transport protein X953_12855 PF06463 Molybdenum Cofactor Synthesis C X953_12855 PF04055 Radical SAM superfamily X953_12860 PF03453 MoeA N-terminal region (domain I and II) X953_12860 PF03454 MoeA C-terminal region (domain IV) X953_12860 PF00994 Probable molybdopterin binding domain X953_12880 PF03862 SpoVAC/SpoVAEB sporulation membrane protein X953_12885 PF07451 Stage V sporulation protein AD (SpoVAD) X953_12890 PF03862 SpoVAC/SpoVAEB sporulation membrane protein X953_12900 PF04239 Protein of unknown function (DUF421) X953_12905 PF00375 Sodium:dicarboxylate symporter family X953_12910 PF08240 Alcohol dehydrogenase GroES-like domain X953_12910 PF00107 Zinc-binding dehydrogenase X953_12915 PF02374 Anion-transporting ATPase X953_12925 PF13722 5TM C-terminal transporter carbon starvation CstA X953_12925 PF02554 Carbon starvation protein CstA X953_12930 PF07849 Protein of unknown function (DUF1641) X953_12935 PF01568 Molydopterin dinucleotide binding domain X953_12935 PF00384 Molybdopterin oxidoreductase X953_12935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region X953_12935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X953_12935 PF12838 4Fe-4S dicluster domain X953_12940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain X953_12940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X953_12950 PF11181 Heat induced stress protein YflT X953_12960 PF09515 Thiamine transporter protein (Thia_YuaJ) X953_12965 PF04264 YceI-like domain X953_12970 PF00330 Aconitase family (aconitate hydratase) X953_12975 PF01032 FecCD transport family X953_12980 PF01497 Periplasmic binding protein X953_13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_13005 PF00106 short chain dehydrogenase X953_13015 PF00501 AMP-binding enzyme X953_13015 PF13193 AMP-binding enzyme C-terminal domain X953_13020 PF00860 Permease family X953_13025 PF01131 DNA topoisomerase X953_13025 PF01751 Toprim domain X953_13030 PF00999 Sodium/hydrogen exchanger family X953_13050 PF04072 Leucine carboxyl methyltransferase X953_13065 PF00392 Bacterial regulatory proteins, gntR family X953_13075 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family X953_13085 PF11798 IMS family HHH motif X953_13085 PF11799 impB/mucB/samB family C-terminal domain X953_13085 PF00817 impB/mucB/samB family X953_13090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD X953_13095 PF00106 short chain dehydrogenase X953_13100 PF06339 Ectoine synthase X953_13105 PF00202 Aminotransferase class-III X953_13110 PF00583 Acetyltransferase (GNAT) family X953_13120 PF00528 Binding-protein-dependent transport system inner membrane component X953_13125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system X953_13130 PF00528 Binding-protein-dependent transport system inner membrane component X953_13135 PF00005 ABC transporter X953_13135 PF00571 CBS domain X953_13140 PF12802 MarR family X953_13150 PF16924 Dipicolinate synthase subunit A N-terminal domain X953_13150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain X953_13160 PF07969 Amidohydrolase family X953_13165 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin X953_13170 PF00011 Hsp20/alpha crystallin family X953_13190 PF00581 Rhodanese-like domain X953_13200 PF00133 tRNA synthetases class I (I, L, M and V) X953_13200 PF09334 tRNA synthetases class I (M) X953_13200 PF13603 Leucyl-tRNA synthetase, Domain 2 X953_13200 PF08264 Anticodon-binding domain of tRNA X953_13205 PF06962 Putative rRNA methylase X953_13210 PF00132 Bacterial transferase hexapeptide (six repeats) X953_13215 PF02773 S-adenosylmethionine synthetase, C-terminal domain X953_13215 PF02772 S-adenosylmethionine synthetase, central domain X953_13215 PF00438 S-adenosylmethionine synthetase, N-terminal domain X953_13220 PF01293 Phosphoenolpyruvate carboxykinase X953_13230 PF00005 ABC transporter X953_13235 PF00528 Binding-protein-dependent transport system inner membrane component X953_13240 PF00293 NUDIX domain X953_13255 PF00005 ABC transporter X953_13260 PF13193 AMP-binding enzyme C-terminal domain X953_13260 PF00501 AMP-binding enzyme X953_13265 PF00378 Enoyl-CoA hydratase/isomerase X953_13270 PF00561 alpha/beta hydrolase fold X953_13275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_13275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_13275 PF16582 Middle domain of thiamine pyrophosphate X953_13280 PF00425 chorismate binding enzyme X953_13285 PF01040 UbiA prenyltransferase family X953_13290 PF03061 Thioesterase superfamily X953_13295 PF01258 Prokaryotic dksA/traR C4-type zinc finger X953_13300 PF12822 ECF transporter, substrate-specific component X953_13305 PF05922 Peptidase inhibitor I9 X953_13305 PF00082 Subtilase family X953_13320 PF07885 Ion channel X953_13320 PF02254 TrkA-N domain X953_13330 PF00575 S1 RNA binding domain X953_13335 PF04070 Domain of unknown function (DUF378) X953_13340 PF00342 Phosphoglucose isomerase X953_13345 PF00155 Aminotransferase class I and II X953_13350 PF00080 Copper/zinc superoxide dismutase (SODC) X953_13360 PF08810 Kinase associated protein B X953_13365 PF00381 PTS HPr component phosphorylation site X953_13370 PF01048 Phosphorylase superfamily X953_13375 PF02681 Divergent PAP2 family X953_13380 PF06725 3D domain X953_13390 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_13395 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_13400 PF01521 Iron-sulphur cluster biosynthesis X953_13405 PF01678 Diaminopimelate epimerase X953_13410 PF07315 Protein of unknown function (DUF1462) X953_13415 PF01106 NifU-like domain X953_13420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X953_13420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X953_13430 PF04608 Phosphatidylglycerophosphatase A X953_13435 PF13344 Haloacid dehalogenase-like hydrolase X953_13445 PF01934 Protein of unknown function DUF86 X953_13455 PF01425 Amidase X953_13465 PF06265 Protein of unknown function (DUF1027) X953_13470 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) X953_13475 PF01551 Peptidase family M23 X953_13485 PF00209 Sodium:neurotransmitter symporter family X953_13490 PF03553 Na+/H+ antiporter family X953_13495 PF09560 Sporulation protein YunB (Spo_YunB) X953_13505 PF08827 Domain of unknown function (DUF1805) X953_13510 PF02872 5'-nucleotidase, C-terminal domain X953_13515 PF01925 Sulfite exporter TauE/SafE X953_13520 PF01458 Uncharacterized protein family (UPF0051) X953_13525 PF01592 NifU-like N terminal domain X953_13530 PF00266 Aminotransferase class-V X953_13535 PF01458 Uncharacterized protein family (UPF0051) X953_13540 PF00005 ABC transporter X953_13550 PF03180 NLPA lipoprotein X953_13555 PF00528 Binding-protein-dependent transport system inner membrane component X953_13560 PF00005 ABC transporter X953_13560 PF09383 NIL domain X953_13565 PF00085 Thioredoxin X953_13570 PF01751 Toprim domain X953_13575 PF01597 Glycine cleavage H-protein X953_13580 PF03960 ArsC family X953_13585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_13585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_13585 PF02770 Acyl-CoA dehydrogenase, middle domain X953_13590 PF00108 Thiolase, N-terminal domain X953_13590 PF02803 Thiolase, C-terminal domain X953_13595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X953_13595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X953_13595 PF00378 Enoyl-CoA hydratase/isomerase X953_13600 PF01619 Proline dehydrogenase X953_13605 PF00403 Heavy-metal-associated domain X953_13610 PF00403 Heavy-metal-associated domain X953_13615 PF02583 Metal-sensitive transcriptional repressor X953_13620 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment X953_13620 PF01297 Zinc-uptake complex component A periplasmic X953_13625 PF00005 ABC transporter X953_13630 PF00950 ABC 3 transport family X953_13635 PF01475 Ferric uptake regulator family X953_13640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) X953_13645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) X953_13650 PF18846 Bacterial archaeo-eukaryotic release factor family 5 X953_13655 PF02028 BCCT, betaine/carnitine/choline family transporter X953_13660 PF00877 NlpC/P60 family X953_13665 PF00463 Isocitrate lyase family X953_13670 PF01274 Malate synthase X953_13680 PF06081 Aromatic acid exporter family member 1 X953_13685 PF00072 Response regulator receiver domain X953_13685 PF00196 Bacterial regulatory proteins, luxR family X953_13690 PF07730 Histidine kinase X953_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_13695 PF09922 Cell wall-active antibiotics response 4TMS YvqF X953_13710 PF07690 Major Facilitator Superfamily X953_13715 PF00296 Luciferase-like monooxygenase X953_13725 PF03006 Haemolysin-III related X953_13730 PF05343 M42 glutamyl aminopeptidase X953_13735 PF01668 SmpB protein X953_13740 PF01297 Zinc-uptake complex component A periplasmic X953_13745 PF00950 ABC 3 transport family X953_13750 PF00005 ABC transporter X953_13760 PF12146 Serine aminopeptidase, S33 X953_13765 PF03840 Preprotein translocase SecG subunit X953_13775 PF00391 PEP-utilising enzyme, mobile domain X953_13775 PF05524 PEP-utilising enzyme, N-terminal X953_13775 PF02896 PEP-utilising enzyme, TIM barrel domain X953_13790 PF00113 Enolase, C-terminal TIM barrel domain X953_13790 PF03952 Enolase, N-terminal domain X953_13795 PF01676 Metalloenzyme superfamily X953_13795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) X953_13800 PF00121 Triosephosphate isomerase X953_13805 PF00162 Phosphoglycerate kinase X953_13810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain X953_13810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain X953_13815 PF04198 Putative sugar-binding domain X953_13825 PF13456 Reverse transcriptase-like X953_13830 PF00474 Sodium:solute symporter family X953_13835 PF04341 Protein of unknown function, DUF485 X953_13855 PF01144 Coenzyme A transferase X953_13860 PF01144 Coenzyme A transferase X953_13865 PF02954 Bacterial regulatory protein, Fis family X953_13865 PF13426 PAS domain X953_13865 PF00158 Sigma-54 interaction domain X953_13885 PF01487 Type I 3-dehydroquinase X953_13890 PF01202 Shikimate kinase X953_13900 PF00574 Clp protease X953_13905 PF00381 PTS HPr component phosphorylation site X953_13910 PF02650 WhiA C-terminal HTH domain X953_13910 PF14527 WhiA LAGLIDADG-like domain X953_13910 PF10298 WhiA N-terminal LAGLIDADG-like domain X953_13915 PF01933 Uncharacterised protein family UPF0052 X953_13920 PF03668 P-loop ATPase protein family X953_13925 PF00293 NUDIX domain X953_13930 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_13940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase X953_13940 PF01266 FAD dependent oxidoreductase X953_13945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X953_13945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X953_13950 PF00230 Major intrinsic protein X953_13960 PF04309 Glycerol-3-phosphate responsive antiterminator X953_13965 PF14602 Hexapeptide repeat of succinyl-transferase X953_13970 PF13419 Haloacid dehalogenase-like hydrolase X953_13975 PF07670 Nucleoside recognition X953_13980 PF01790 Prolipoprotein diacylglyceryl transferase X953_13985 PF02603 HPr Serine kinase N terminus X953_13985 PF07475 HPr Serine kinase C-terminal domain X953_13990 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV X953_13995 PF04024 PspC domain X953_14000 PF02585 GlcNAc-PI de-N-acetylase X953_14005 PF08830 Protein of unknown function (DUF1806) X953_14010 PF17755 UvrA DNA-binding domain X953_14010 PF17760 UvrA interaction domain X953_14010 PF00005 ABC transporter X953_14015 PF17757 UvrB interaction domain X953_14015 PF00271 Helicase conserved C-terminal domain X953_14015 PF12344 Ultra-violet resistance protein B X953_14015 PF04851 Type III restriction enzyme, res subunit X953_14015 PF02151 UvrB/uvrC motif X953_14020 PF07732 Multicopper oxidase X953_14025 PF17820 PDZ domain X953_14030 PF01471 Putative peptidoglycan binding domain X953_14030 PF03572 Peptidase family S41 X953_14030 PF17820 PDZ domain X953_14035 PF04225 Opacity-associated protein A LysM-like domain X953_14035 PF01551 Peptidase family M23 X953_14040 PF18075 FtsX extracellular domain X953_14040 PF02687 FtsX-like permease family X953_14045 PF00005 ABC transporter X953_14050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X953_14055 PF03462 PCRF domain X953_14055 PF00472 RF-1 domain X953_14060 PF02810 SEC-C motif X953_14060 PF07516 SecA Wing and Scaffold domain X953_14060 PF07517 SecA DEAD-like domain X953_14060 PF01043 SecA preprotein cross-linking domain X953_14070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein X953_14070 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus X953_14080 PF02561 Flagellar protein FliS X953_14085 PF03646 FlaG protein X953_14090 PF02599 Global regulator protein family X953_14095 PF02623 FliW protein X953_14105 PF00700 Bacterial flagellin C-terminal helical region X953_14105 PF00669 Bacterial flagellin N-terminal helical region X953_14110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X953_14110 PF00460 Flagella basal body rod protein X953_14135 PF04851 Type III restriction enzyme, res subunit X953_14135 PF00271 Helicase conserved C-terminal domain X953_14140 PF02645 Uncharacterised protein, DegV family COG1307 X953_14145 PF00072 Response regulator receiver domain X953_14145 PF00196 Bacterial regulatory proteins, luxR family X953_14150 PF07730 Histidine kinase X953_14150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_14150 PF05384 Sensor protein DegS X953_14155 PF09186 Domain of unknown function (DUF1949) X953_14155 PF01205 Uncharacterized protein family UPF0029 X953_14160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase X953_14165 PF01979 Amidohydrolase family X953_14170 PF00367 phosphotransferase system, EIIB X953_14170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 X953_14170 PF02378 Phosphotransferase system, EIIC X953_14185 PF01381 Helix-turn-helix X953_14185 PF08671 Anti-repressor SinI X953_14210 PF12389 Camelysin metallo-endopeptidase X953_14215 PF12389 Camelysin metallo-endopeptidase X953_14220 PF04203 Sortase domain X953_14225 PF03816 Cell envelope-related transcriptional attenuator domain X953_14230 PF05223 NTF2-like N-terminal transpeptidase domain X953_14230 PF03717 Penicillin-binding Protein dimerisation domain X953_14230 PF00905 Penicillin binding protein transpeptidase domain X953_14250 PF00171 Aldehyde dehydrogenase family X953_14265 PF07690 Major Facilitator Superfamily X953_14270 PF02626 Carboxyltransferase domain, subdomain A and B X953_14275 PF03746 LamB/YcsF family X953_14280 PF02682 Carboxyltransferase domain, subdomain C and D X953_14285 PF00939 Sodium:sulfate symporter transmembrane region X953_14290 PF07690 Major Facilitator Superfamily X953_14295 PF07690 Major Facilitator Superfamily X953_14305 PF00884 Sulfatase X953_14310 PF12729 Four helix bundle sensory module for signal transduction X953_14310 PF00672 HAMP domain X953_14310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_14315 PF00196 Bacterial regulatory proteins, luxR family X953_14315 PF00072 Response regulator receiver domain X953_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_14320 PF00672 HAMP domain X953_14320 PF02743 Cache domain X953_14325 PF05231 MASE1 X953_14325 PF00563 EAL domain X953_14330 PF00072 Response regulator receiver domain X953_14335 PF01584 CheW-like domain X953_14340 PF01627 Hpt domain X953_14340 PF01584 CheW-like domain X953_14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_14340 PF07194 P2 response regulator binding domain X953_14340 PF02895 Signal transducing histidine kinase, homodimeric domain X953_14350 PF00691 OmpA family X953_14350 PF13677 Membrane MotB of proton-channel complex MotA/MotB X953_14355 PF01618 MotA/TolQ/ExbB proton channel family X953_14360 PF02465 Flagellar hook-associated protein 2 N-terminus X953_14360 PF07195 Flagellar hook-associated protein 2 C-terminus X953_14380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_14390 PF00474 Sodium:solute symporter family X953_14400 PF00144 Beta-lactamase X953_14405 PF00933 Glycosyl hydrolase family 3 N terminal domain X953_14405 PF01915 Glycosyl hydrolase family 3 C-terminal domain X953_14410 PF07075 Protein of unknown function (DUF1343) X953_14415 PF00528 Binding-protein-dependent transport system inner membrane component X953_14430 PF13580 SIS domain X953_14435 PF01380 SIS domain X953_14435 PF01418 Helix-turn-helix domain, rpiR family X953_14440 PF01869 BadF/BadG/BcrA/BcrD ATPase family X953_14445 PF00258 Flavodoxin X953_14460 PF03190 Protein of unknown function, DUF255 X953_14490 PF01131 DNA topoisomerase X953_14490 PF01751 Toprim domain X953_14495 PF02659 Putative manganese efflux pump X953_14510 PF13509 S1 domain X953_14510 PF17783 CvfB-like winged helix domain X953_14520 PF09962 Uncharacterized conserved protein (DUF2196) X953_14540 PF01970 Tripartite tricarboxylate transporter TctA family X953_14555 PF08279 HTH domain X953_14555 PF12431 Transcriptional regulator X953_14555 PF00072 Response regulator receiver domain X953_14560 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain X953_14560 PF17203 Single cache domain 3 X953_14560 PF00989 PAS fold X953_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_14570 PF07690 Major Facilitator Superfamily X953_14575 PF13291 ACT domain X953_14575 PF00291 Pyridoxal-phosphate dependent enzyme X953_14585 PF01804 Penicillin amidase X953_14590 PF02595 Glycerate kinase family X953_14595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) X953_14605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_14610 PF00528 Binding-protein-dependent transport system inner membrane component X953_14615 PF00528 Binding-protein-dependent transport system inner membrane component X953_14620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_14620 PF00005 ABC transporter X953_14625 PF00005 ABC transporter X953_14625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_14630 PF00483 Nucleotidyl transferase X953_14635 PF16363 GDP-mannose 4,6 dehydratase X953_14640 PF00535 Glycosyl transferase family 2 X953_14650 PF00892 EamA-like transporter family X953_14655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family X953_14665 PF02789 Cytosol aminopeptidase family, N-terminal domain X953_14665 PF00883 Cytosol aminopeptidase family, catalytic domain X953_14675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_14675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_14690 PF00330 Aconitase family (aconitate hydratase) X953_14695 PF00180 Isocitrate/isopropylmalate dehydrogenase X953_14700 PF00682 HMGL-like X953_14700 PF08502 LeuA allosteric (dimerisation) domain X953_14705 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain X953_14705 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain X953_14710 PF01842 ACT domain X953_14710 PF10369 Small subunit of acetolactate synthase X953_14715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_14715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_14715 PF00205 Thiamine pyrophosphate enzyme, central domain X953_14720 PF00920 Dehydratase family X953_14725 PF01758 Sodium Bile acid symporter family X953_14730 PF07969 Amidohydrolase family X953_14735 PF00180 Isocitrate/isopropylmalate dehydrogenase X953_14745 PF00842 Alanine racemase, C-terminal domain X953_14745 PF01168 Alanine racemase, N-terminal domain X953_14755 PF00291 Pyridoxal-phosphate dependent enzyme X953_14765 PF01042 Endoribonuclease L-PSP X953_14770 PF00171 Aldehyde dehydrogenase family X953_14775 PF00202 Aminotransferase class-III X953_14780 PF00392 Bacterial regulatory proteins, gntR family X953_14780 PF07729 FCD domain X953_14785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X953_14785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X953_14790 PF00557 Metallopeptidase family M24 X953_14790 PF01321 Creatinase/Prolidase N-terminal domain X953_14800 PF00248 Aldo/keto reductase family X953_14815 PF00005 ABC transporter X953_14840 PF05199 GMC oxidoreductase X953_14840 PF00732 GMC oxidoreductase X953_14850 PF00902 Sec-independent protein translocase protein (TatC) X953_14855 PF07722 Peptidase C26 X953_14865 PF01520 N-acetylmuramoyl-L-alanine amidase X953_14870 PF00205 Thiamine pyrophosphate enzyme, central domain X953_14870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_14870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_14875 PF03466 LysR substrate binding domain X953_14880 PF00202 Aminotransferase class-III X953_14885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain X953_14885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain X953_14895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_14895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_14900 PF00005 ABC transporter X953_14905 PF00528 Binding-protein-dependent transport system inner membrane component X953_14910 PF00497 Bacterial extracellular solute-binding proteins, family 3 X953_14915 PF00171 Aldehyde dehydrogenase family X953_14920 PF03070 TENA/THI-4/PQQC family X953_14925 PF02028 BCCT, betaine/carnitine/choline family transporter X953_14935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X953_14945 PF00115 Cytochrome C and Quinol oxidase polypeptide I X953_14950 PF00510 Cytochrome c oxidase subunit III X953_14965 PF03595 Voltage-dependent anion channel X953_14975 PF13476 AAA domain X953_14980 PF12320 Type 5 capsule protein repressor C-terminal domain X953_14980 PF00149 Calcineurin-like phosphoesterase X953_15005 PF01047 MarR family X953_15010 PF07690 Major Facilitator Superfamily X953_15015 PF08543 Phosphomethylpyrimidine kinase X953_15020 PF03412 Peptidase C39 family X953_15020 PF00005 ABC transporter X953_15020 PF00664 ABC transporter transmembrane region X953_15025 PF03649 Uncharacterised protein family (UPF0014) X953_15040 PF10282 Lactonase, 7-bladed beta-propeller X953_15045 PF00478 IMP dehydrogenase / GMP reductase domain X953_15055 PF05199 GMC oxidoreductase X953_15055 PF00732 GMC oxidoreductase X953_15060 PF00294 pfkB family carbohydrate kinase X953_15065 PF01791 DeoC/LacD family aldolase X953_15075 PF01380 SIS domain X953_15090 PF00480 ROK family X953_15095 PF16347 Domain of unknown function (DUF4976) X953_15095 PF00884 Sulfatase X953_15105 PF00356 Bacterial regulatory proteins, lacI family X953_15115 PF03816 Cell envelope-related transcriptional attenuator domain X953_15120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_15125 PF03167 Uracil DNA glycosylase superfamily X953_15130 PF00860 Permease family X953_15140 PF04552 Sigma-54, DNA binding domain X953_15140 PF04963 Sigma-54 factor, core binding domain X953_15140 PF00309 Sigma-54 factor, Activator interacting domain (AID) X953_15150 PF12323 Helix-turn-helix domain X953_15150 PF07282 Putative transposase DNA-binding domain X953_15150 PF01385 Probable transposase X953_15160 PF01321 Creatinase/Prolidase N-terminal domain X953_15160 PF00557 Metallopeptidase family M24 X953_15175 PF03109 ABC1 family X953_15180 PF07690 Major Facilitator Superfamily X953_15195 PF04203 Sortase domain X953_15205 PF02632 BioY family X953_15210 PF13031 Protein of unknown function (DUF3892) X953_15215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X953_15215 PF01568 Molydopterin dinucleotide binding domain X953_15215 PF00384 Molybdopterin oxidoreductase X953_15220 PF10057 Uncharacterized conserved protein (DUF2294) X953_15225 PF06146 Phosphate-starvation-inducible E X953_15230 PF03358 NADPH-dependent FMN reductase X953_15235 PF00474 Sodium:solute symporter family X953_15245 PF00171 Aldehyde dehydrogenase family X953_15265 PF10127 RNA repair pathway DNA polymerase beta family X953_15275 PF02096 60Kd inner membrane protein X953_15280 PF00082 Subtilase family X953_15285 PF07690 Major Facilitator Superfamily X953_15290 PF01244 Membrane dipeptidase (Peptidase family M19) X953_15295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X953_15295 PF13378 Enolase C-terminal domain-like X953_15300 PF00082 Subtilase family X953_15305 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family X953_15315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_15315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_15320 PF08240 Alcohol dehydrogenase GroES-like domain X953_15320 PF00107 Zinc-binding dehydrogenase X953_15325 PF00296 Luciferase-like monooxygenase X953_15330 PF02589 LUD domain X953_15335 PF02589 LUD domain X953_15335 PF13183 4Fe-4S dicluster domain X953_15335 PF11870 Domain of unknown function (DUF3390) X953_15340 PF02754 Cysteine-rich domain X953_15345 PF00392 Bacterial regulatory proteins, gntR family X953_15345 PF07729 FCD domain X953_15350 PF02652 L-lactate permease X953_15360 PF00480 ROK family X953_15365 PF00701 Dihydrodipicolinate synthetase family X953_15370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase X953_15375 PF01380 SIS domain X953_15375 PF01418 Helix-turn-helix domain, rpiR family X953_15385 PF03480 Bacterial extracellular solute-binding protein, family 7 X953_15390 PF07859 alpha/beta hydrolase fold X953_15440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) X953_15440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 X953_15475 PF00196 Bacterial regulatory proteins, luxR family X953_15475 PF00072 Response regulator receiver domain X953_15490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family X953_15505 PF00291 Pyridoxal-phosphate dependent enzyme X953_15510 PF01042 Endoribonuclease L-PSP X953_15520 PF02028 BCCT, betaine/carnitine/choline family transporter X953_15535 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal X953_15535 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal X953_15540 PF00664 ABC transporter transmembrane region X953_15540 PF00005 ABC transporter X953_15550 PF00171 Aldehyde dehydrogenase family X953_15555 PF00672 HAMP domain X953_15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_15555 PF02743 Cache domain X953_15560 PF02973 Sialidase, N-terminal domain X953_15560 PF00754 F5/8 type C domain X953_15560 PF13088 BNR repeat-like domain X953_15565 PF00356 Bacterial regulatory proteins, lacI family X953_15580 PF00860 Permease family X953_15585 PF01979 Amidohydrolase family X953_15595 PF03611 PTS system sugar-specific permease component X953_15600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X953_15605 PF00899 ThiF family X953_15610 PF05690 Thiazole biosynthesis protein ThiG X953_15615 PF05690 Thiazole biosynthesis protein ThiG X953_15615 PF02597 ThiS family X953_15620 PF01266 FAD dependent oxidoreductase X953_15625 PF02581 Thiamine monophosphate synthase X953_15640 PF00144 Beta-lactamase X953_15655 PF01380 SIS domain X953_15655 PF01418 Helix-turn-helix domain, rpiR family X953_15660 PF01380 SIS domain X953_15665 PF07075 Protein of unknown function (DUF1343) X953_15670 PF00933 Glycosyl hydrolase family 3 N terminal domain X953_15670 PF01915 Glycosyl hydrolase family 3 C-terminal domain X953_15675 PF00528 Binding-protein-dependent transport system inner membrane component X953_15680 PF00528 Binding-protein-dependent transport system inner membrane component X953_15690 PF03806 AbgT putative transporter family X953_15695 PF01261 Xylose isomerase-like TIM barrel X953_15700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X953_15700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X953_15705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X953_15705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X953_15715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X953_15715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X953_15720 PF00528 Binding-protein-dependent transport system inner membrane component X953_15725 PF00528 Binding-protein-dependent transport system inner membrane component X953_15730 PF01547 Bacterial extracellular solute-binding protein X953_15740 PF00356 Bacterial regulatory proteins, lacI family X953_15745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X953_15745 PF00205 Thiamine pyrophosphate enzyme, central domain X953_15745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X953_15750 PF00465 Iron-containing alcohol dehydrogenase X953_15755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component X953_15760 PF03480 Bacterial extracellular solute-binding protein, family 7 X953_15780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X953_15785 PF01638 HxlR-like helix-turn-helix X953_15795 PF03781 Sulfatase-modifying factor enzyme 1 X953_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_15800 PF03466 LysR substrate binding domain X953_15805 PF01925 Sulfite exporter TauE/SafE X953_15810 PF07969 Amidohydrolase family X953_15815 PF01546 Peptidase family M20/M25/M40 X953_15815 PF07687 Peptidase dimerisation domain X953_15820 PF07969 Amidohydrolase family X953_15825 PF00474 Sodium:solute symporter family X953_15830 PF01156 Inosine-uridine preferring nucleoside hydrolase X953_15845 PF01047 MarR family X953_15850 PF03176 MMPL family X953_15860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_15895 PF02129 X-Pro dipeptidyl-peptidase (S15 family) X953_15895 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain X953_15905 PF00528 Binding-protein-dependent transport system inner membrane component X953_15905 PF12911 N-terminal TM domain of oligopeptide transport permease C X953_15910 PF00528 Binding-protein-dependent transport system inner membrane component X953_15915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_15920 PF00005 ABC transporter X953_15920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_15925 PF00005 ABC transporter X953_15925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_15930 PF00171 Aldehyde dehydrogenase family X953_15935 PF00701 Dihydrodipicolinate synthetase family X953_15940 PF03553 Na+/H+ antiporter family X953_15950 PF05544 Proline racemase X953_15955 PF01266 FAD dependent oxidoreductase X953_15960 PF00158 Sigma-54 interaction domain X953_15960 PF13426 PAS domain X953_15960 PF02954 Bacterial regulatory protein, Fis family X953_15975 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_15975 PF04324 BFD-like [2Fe-2S] binding domain X953_15985 PF04951 D-aminopeptidase X953_15990 PF13426 PAS domain X953_15990 PF00158 Sigma-54 interaction domain X953_15990 PF02954 Bacterial regulatory protein, Fis family X953_15995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_15995 PF00005 ABC transporter X953_16000 PF00005 ABC transporter X953_16000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_16005 PF00528 Binding-protein-dependent transport system inner membrane component X953_16005 PF12911 N-terminal TM domain of oligopeptide transport permease C X953_16010 PF00528 Binding-protein-dependent transport system inner membrane component X953_16015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_16025 PF16657 Maltogenic Amylase, C-terminal domain X953_16025 PF00128 Alpha amylase, catalytic domain X953_16035 PF00356 Bacterial regulatory proteins, lacI family X953_16040 PF00528 Binding-protein-dependent transport system inner membrane component X953_16045 PF00528 Binding-protein-dependent transport system inner membrane component X953_16060 PF08378 Nuclease-related domain X953_16065 PF13419 Haloacid dehalogenase-like hydrolase X953_16070 PF02129 X-Pro dipeptidyl-peptidase (S15 family) X953_16070 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain X953_16080 PF03951 Glutamine synthetase, beta-Grasp domain X953_16080 PF00120 Glutamine synthetase, catalytic domain X953_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_16085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster X953_16090 PF04898 Glutamate synthase central domain X953_16090 PF01645 Conserved region in glutamate synthase X953_16090 PF00310 Glutamine amidotransferases class-II X953_16090 PF01493 GXGXG motif X953_16095 PF03466 LysR substrate binding domain X953_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_16100 PF13537 Glutamine amidotransferase domain X953_16100 PF00733 Asparagine synthase X953_16105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X953_16105 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_16120 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH X953_16120 PF04740 LXG domain of WXG superfamily X953_16130 PF04740 LXG domain of WXG superfamily X953_16130 PF14449 Pre-toxin TG X953_16155 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) X953_16175 PF13614 AAA domain X953_16180 PF00474 Sodium:solute symporter family X953_16195 PF01266 FAD dependent oxidoreductase X953_16205 PF13378 Enolase C-terminal domain-like X953_16205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X953_16215 PF01546 Peptidase family M20/M25/M40 X953_16215 PF07687 Peptidase dimerisation domain X953_16220 PF01380 SIS domain X953_16220 PF01418 Helix-turn-helix domain, rpiR family X953_16225 PF01381 Helix-turn-helix X953_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_16235 PF06580 Histidine kinase X953_16370 PF00158 Sigma-54 interaction domain X953_16375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_16380 PF01380 SIS domain X953_16380 PF01418 Helix-turn-helix domain, rpiR family X953_16385 PF01546 Peptidase family M20/M25/M40 X953_16385 PF07687 Peptidase dimerisation domain X953_16390 PF03613 PTS system mannose/fructose/sorbose family IID component X953_16395 PF03609 PTS system sorbose-specific iic component X953_16400 PF03830 PTS system sorbose subfamily IIB component X953_16400 PF03610 PTS system fructose IIA component X953_16435 PF00669 Bacterial flagellin N-terminal helical region X953_16435 PF00700 Bacterial flagellin C-terminal helical region X953_16440 PF00669 Bacterial flagellin N-terminal helical region X953_16440 PF00700 Bacterial flagellin C-terminal helical region X953_16450 PF01381 Helix-turn-helix X953_16495 PF01078 Magnesium chelatase, subunit ChlI X953_16495 PF13335 Magnesium chelatase, subunit ChlI C-terminal X953_16515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain X953_16515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain X953_16515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain X953_16555 PF13302 Acetyltransferase (GNAT) domain X953_16560 PF02585 GlcNAc-PI de-N-acetylase X953_16565 PF00551 Formyl transferase X953_16565 PF02911 Formyl transferase, C-terminal domain X953_16565 PF01370 NAD dependent epimerase/dehydratase family X953_16570 PF02397 Bacterial sugar transferase X953_16575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family X953_16590 PF00483 Nucleotidyl transferase X953_16595 PF02719 Polysaccharide biosynthesis protein X953_16600 PF03472 Autoinducer binding domain X953_16600 PF00196 Bacterial regulatory proteins, luxR family X953_16605 PF00196 Bacterial regulatory proteins, luxR family X953_16605 PF00072 Response regulator receiver domain X953_16615 PF13614 AAA domain X953_16620 PF13807 G-rich domain on putative tyrosine kinase X953_16620 PF02706 Chain length determinant protein X953_16625 PF00877 NlpC/P60 family X953_16625 PF01476 LysM domain X953_16635 PF03413 Peptidase propeptide and YPEB domain X953_16635 PF07504 Fungalysin/Thermolysin Propeptide Motif X953_16635 PF01447 Thermolysin metallopeptidase, catalytic domain X953_16635 PF02868 Thermolysin metallopeptidase, alpha-helical domain X953_16660 PF00206 Lyase X953_16660 PF14698 Argininosuccinate lyase C-terminal X953_16665 PF00528 Binding-protein-dependent transport system inner membrane component X953_16670 PF00005 ABC transporter X953_16670 PF08402 TOBE domain X953_16680 PF01047 MarR family X953_16680 PF00480 ROK family X953_16695 PF01325 Iron dependent repressor, N-terminal DNA binding domain X953_16695 PF00480 ROK family X953_16715 PF00474 Sodium:solute symporter family X953_16720 PF01238 Phosphomannose isomerase type I X953_16725 PF00480 ROK family X953_16735 PF00528 Binding-protein-dependent transport system inner membrane component X953_16740 PF00528 Binding-protein-dependent transport system inner membrane component X953_16750 PF00072 Response regulator receiver domain X953_16750 PF12833 Helix-turn-helix domain X953_16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_16755 PF00672 HAMP domain X953_16755 PF02743 Cache domain X953_16755 PF06580 Histidine kinase X953_16760 PF13407 Periplasmic binding protein domain X953_16770 PF00528 Binding-protein-dependent transport system inner membrane component X953_16785 PF13802 Galactose mutarotase-like X953_16785 PF17137 Domain of unknown function (DUF5110) X953_16785 PF01055 Glycosyl hydrolases family 31 X953_16785 PF16338 Domain of unknown function (DUF4968) X953_16790 PF00072 Response regulator receiver domain X953_16790 PF12833 Helix-turn-helix domain X953_16795 PF02743 Cache domain X953_16795 PF00672 HAMP domain X953_16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_16795 PF06580 Histidine kinase X953_16800 PF10509 Galactokinase galactose-binding signature X953_16800 PF08544 GHMP kinases C terminal X953_16800 PF00288 GHMP kinases N terminal domain X953_16810 PF16363 GDP-mannose 4,6 dehydratase X953_16815 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain X953_16815 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain X953_16820 PF01263 Aldose 1-epimerase X953_16825 PF03932 CutC family X953_16830 PF08125 Mannitol dehydrogenase C-terminal domain X953_16830 PF01232 Mannitol dehydrogenase Rossmann domain X953_16835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X953_16840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X953_16840 PF08279 HTH domain X953_16840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit X953_16840 PF05043 Mga helix-turn-helix domain X953_16840 PF00874 PRD domain X953_16845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit X953_16845 PF02378 Phosphotransferase system, EIIC X953_16850 PF01894 Uncharacterised protein family UPF0047 X953_16855 PF06580 Histidine kinase X953_16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_16860 PF05738 Cna protein B-type domain X953_16860 PF17802 Prealbumin-like fold domain X953_16860 PF05737 Collagen binding domain X953_16865 PF04397 LytTr DNA-binding domain X953_16865 PF00072 Response regulator receiver domain X953_16895 PF03808 Glycosyl transferase WecB/TagA/CpsF family X953_16900 PF03816 Cell envelope-related transcriptional attenuator domain X953_16905 PF00953 Glycosyl transferase family 4 X953_16910 PF00534 Glycosyl transferases group 1 X953_16910 PF13439 Glycosyltransferase Family 4 X953_16920 PF00535 Glycosyl transferase family 2 X953_16940 PF03009 Glycerophosphoryl diester phosphodiesterase family X953_16945 PF00005 ABC transporter X953_16950 PF01061 ABC-2 type transporter X953_16955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase X953_16955 PF13457 GW (Gly-Tryp) dipeptide domain X953_16960 PF08239 Bacterial SH3 domain X953_16960 PF05036 Sporulation related domain X953_16960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase X953_16970 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase X953_16975 PF16912 Glucose dehydrogenase C-terminus X953_16975 PF08240 Alcohol dehydrogenase GroES-like domain X953_16980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase X953_16985 PF00534 Glycosyl transferases group 1 X953_16990 PF01467 Cytidylyltransferase-like X953_16995 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase X953_17005 PF01467 Cytidylyltransferase-like X953_17010 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase X953_17015 PF00884 Sulfatase X953_17025 PF00082 Subtilase family X953_17025 PF06280 Fn3-like domain X953_17025 PF00746 LPXTG cell wall anchor motif X953_17025 PF02225 PA domain X953_17030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X953_17030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain X953_17035 PF00953 Glycosyl transferase family 4 X953_17045 PF09084 NMT1/THI5 like X953_17055 PF00528 Binding-protein-dependent transport system inner membrane component X953_17060 PF00005 ABC transporter X953_17070 PF17425 Arylsulfotransferase Ig-like domain X953_17070 PF05935 Arylsulfotransferase (ASST) X953_17080 PF00893 Small Multidrug Resistance protein X953_17085 PF00893 Small Multidrug Resistance protein X953_17105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain X953_17105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain X953_17115 PF00873 AcrB/AcrD/AcrF family X953_17125 PF00440 Bacterial regulatory proteins, tetR family X953_17135 PF12732 YtxH-like protein X953_17145 PF07977 FabA-like domain X953_17160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X953_17160 PF00460 Flagella basal body rod protein X953_17165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X953_17165 PF00460 Flagella basal body rod protein X953_17175 PF12116 Stage III sporulation protein D X953_17190 PF01551 Peptidase family M23 X953_17200 PF08486 Stage II sporulation protein X953_17205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_17205 PF00005 ABC transporter X953_17210 PF00877 NlpC/P60 family X953_17215 PF13378 Enolase C-terminal domain-like X953_17215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X953_17220 PF02016 LD-carboxypeptidase N-terminal domain X953_17220 PF17676 LD-carboxypeptidase C-terminal domain X953_17225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_17230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_17230 PF00005 ABC transporter X953_17235 PF00528 Binding-protein-dependent transport system inner membrane component X953_17235 PF12911 N-terminal TM domain of oligopeptide transport permease C X953_17240 PF00528 Binding-protein-dependent transport system inner membrane component X953_17245 PF04951 D-aminopeptidase X953_17250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X953_17270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain X953_17270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain X953_17275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X953_17275 PF02874 ATP synthase alpha/beta family, beta-barrel domain X953_17280 PF00231 ATP synthase X953_17285 PF00306 ATP synthase alpha/beta chain, C terminal domain X953_17285 PF02874 ATP synthase alpha/beta family, beta-barrel domain X953_17285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X953_17290 PF00213 ATP synthase delta (OSCP) subunit X953_17295 PF00430 ATP synthase B/B' CF(0) X953_17300 PF00137 ATP synthase subunit C X953_17305 PF00119 ATP synthase A chain X953_17310 PF03899 ATP synthase I chain X953_17315 PF02225 PA domain X953_17315 PF05922 Peptidase inhibitor I9 X953_17315 PF13860 FlgD Ig-like domain X953_17315 PF00082 Subtilase family X953_17320 PF02350 UDP-N-acetylglucosamine 2-epimerase X953_17330 PF00464 Serine hydroxymethyltransferase X953_17335 PF04260 Protein of unknown function (DUF436) X953_17340 PF02502 Ribose/Galactose Isomerase X953_17345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X953_17345 PF00672 HAMP domain X953_17345 PF02743 Cache domain X953_17350 PF01451 Low molecular weight phosphotyrosine protein phosphatase X953_17355 PF02659 Putative manganese efflux pump X953_17360 PF01300 Telomere recombination X953_17360 PF03481 Putative GTP-binding controlling metal-binding X953_17380 PF13847 Methyltransferase domain X953_17380 PF17827 PrmC N-terminal domain X953_17385 PF00472 RF-1 domain X953_17385 PF03462 PCRF domain X953_17390 PF00265 Thymidine kinase X953_17395 PF01197 Ribosomal protein L31 X953_17400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X953_17400 PF07498 Rho termination factor, N-terminal domain X953_17400 PF07497 Rho termination factor, RNA-binding domain X953_17405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded X953_17410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X953_17415 PF00923 Transaldolase/Fructose-6-phosphate aldolase X953_17420 PF01116 Fructose-bisphosphate aldolase class-II X953_17425 PF00072 Response regulator receiver domain X953_17430 PF06418 CTP synthase N-terminus X953_17430 PF00117 Glutamine amidotransferase class-I X953_17435 PF05066 HB1, ASXL, restriction endonuclease HTH domain X953_17450 PF02310 B12 binding domain X953_17450 PF01642 Methylmalonyl-CoA mutase X953_17465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_17465 PF02770 Acyl-CoA dehydrogenase, middle domain X953_17465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_17470 PF02770 Acyl-CoA dehydrogenase, middle domain X953_17470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_17470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_17475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X953_17475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X953_17480 PF00108 Thiolase, N-terminal domain X953_17480 PF02803 Thiolase, C-terminal domain X953_17485 PF02754 Cysteine-rich domain X953_17485 PF13183 4Fe-4S dicluster domain X953_17490 PF00750 tRNA synthetases class I (R) X953_17490 PF05746 DALR anticodon binding domain X953_17490 PF03485 Arginyl tRNA synthetase N terminal domain X953_17505 PF00491 Arginase family X953_17515 PF00905 Penicillin binding protein transpeptidase domain X953_17515 PF00912 Transglycosylase X953_17520 PF08741 YwhD family X953_17530 PF01966 HD domain X953_17535 PF03099 Biotin/lipoate A/B protein ligase family X953_17540 PF01515 Phosphate acetyl/butaryl transferase X953_17555 PF09671 Spore coat protein (Spore_GerQ) X953_17565 PF04241 Protein of unknown function (DUF423) X953_17580 PF01645 Conserved region in glutamate synthase X953_17590 PF03109 ABC1 family X953_17610 PF02735 Ku70/Ku80 beta-barrel domain X953_17615 PF01068 ATP dependent DNA ligase domain X953_17620 PF00375 Sodium:dicarboxylate symporter family X953_17625 PF02566 OsmC-like protein X953_17640 PF04343 Protein of unknown function, DUF488 X953_17645 PF03741 Integral membrane protein TerC family X953_17650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III X953_17650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I X953_17650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain X953_17650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II X953_17655 PF01594 AI-2E family transporter X953_17675 PF05525 Branched-chain amino acid transport protein X953_17680 PF16124 RecQ zinc-binding X953_17680 PF00570 HRDC domain X953_17680 PF00271 Helicase conserved C-terminal domain X953_17680 PF09382 RQC domain X953_17680 PF00270 DEAD/DEAH box helicase X953_17685 PF02073 Thermophilic metalloprotease (M29) X953_17690 PF01235 Sodium:alanine symporter family X953_17695 PF03061 Thioesterase superfamily X953_17700 PF13091 PLD-like domain X953_17700 PF13396 Phospholipase_D-nuclease N-terminal X953_17705 PF01053 Cys/Met metabolism PLP-dependent enzyme X953_17710 PF00892 EamA-like transporter family X953_17715 PF01053 Cys/Met metabolism PLP-dependent enzyme X953_17720 PF13472 GDSL-like Lipase/Acylhydrolase family X953_17725 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) X953_17730 PF05721 Phytanoyl-CoA dioxygenase (PhyH) X953_17745 PF12848 ABC transporter X953_17745 PF00005 ABC transporter X953_17750 PF01370 NAD dependent epimerase/dehydratase family X953_17755 PF00155 Aminotransferase class I and II X953_17765 PF06725 3D domain X953_17765 PF01476 LysM domain X953_17765 PF06725 3D domain X953_17765 PF01476 LysM domain X953_17770 PF06207 Protein of unknown function (DUF1002) X953_17775 PF07690 Major Facilitator Superfamily X953_17785 PF00465 Iron-containing alcohol dehydrogenase X953_17790 PF01042 Endoribonuclease L-PSP X953_17805 PF01554 MatE X953_17820 PF16868 NMT1-like family X953_17825 PF13193 AMP-binding enzyme C-terminal domain X953_17825 PF00501 AMP-binding enzyme X953_17830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_17830 PF00005 ABC transporter X953_17835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X953_17835 PF00005 ABC transporter X953_17840 PF00528 Binding-protein-dependent transport system inner membrane component X953_17840 PF12911 N-terminal TM domain of oligopeptide transport permease C X953_17845 PF00528 Binding-protein-dependent transport system inner membrane component X953_17850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X953_17870 PF00176 SNF2 family N-terminal domain X953_17870 PF12419 SNF2 Helicase protein X953_17870 PF00271 Helicase conserved C-terminal domain X953_17875 PF07690 Major Facilitator Superfamily X953_17880 PF01380 SIS domain X953_17880 PF01418 Helix-turn-helix domain, rpiR family X953_17885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X953_17885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain X953_17890 PF02447 GntP family permease X953_17895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X953_17895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X953_17905 PF03606 C4-dicarboxylate anaerobic carrier X953_17910 PF00080 Copper/zinc superoxide dismutase (SODC) X953_17920 PF00392 Bacterial regulatory proteins, gntR family X953_17925 PF13732 Domain of unknown function (DUF4162) X953_17925 PF00005 ABC transporter X953_17940 PF03358 NADPH-dependent FMN reductase X953_17945 PF08239 Bacterial SH3 domain X953_17945 PF01520 N-acetylmuramoyl-L-alanine amidase X953_17955 PF13649 Methyltransferase domain X953_17975 PF13302 Acetyltransferase (GNAT) domain X953_17995 PF00268 Ribonucleotide reductase, small chain X953_18000 PF00258 Flavodoxin X953_18005 PF03477 ATP cone domain X953_18005 PF00317 Ribonucleotide reductase, all-alpha domain X953_18005 PF02867 Ribonucleotide reductase, barrel domain X953_18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_18010 PF03466 LysR substrate binding domain X953_18015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X953_18015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain X953_18020 PF09383 NIL domain X953_18020 PF00005 ABC transporter X953_18040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X953_18040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X953_18045 PF05853 beta-keto acid cleavage enzyme X953_18050 PF02028 BCCT, betaine/carnitine/choline family transporter X953_18055 PF00753 Metallo-beta-lactamase superfamily X953_18060 PF04239 Protein of unknown function (DUF421) X953_18065 PF00733 Asparagine synthase X953_18065 PF13537 Glutamine amidotransferase domain X953_18070 PF02634 FdhD/NarQ family X953_18085 PF01235 Sodium:alanine symporter family X953_18100 PF00990 Diguanylate cyclase, GGDEF domain X953_18100 PF07694 5TMR of 5TMR-LYT X953_18110 PF04055 Radical SAM superfamily X953_18115 PF00296 Luciferase-like monooxygenase X953_18120 PF03358 NADPH-dependent FMN reductase X953_18125 PF01435 Peptidase family M48 X953_18130 PF00795 Carbon-nitrogen hydrolase X953_18135 PF00196 Bacterial regulatory proteins, luxR family X953_18135 PF00072 Response regulator receiver domain X953_18140 PF07730 Histidine kinase X953_18145 PF00487 Fatty acid desaturase X953_18150 PF11553 Protein of unknown function (DUF3231) X953_18160 PF13307 Helicase C-terminal domain X953_18170 PF00072 Response regulator receiver domain X953_18170 PF04397 LytTr DNA-binding domain X953_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase X953_18190 PF04172 LrgB-like family X953_18195 PF03788 LrgA family X953_18200 PF00206 Lyase X953_18200 PF14698 Argininosuccinate lyase C-terminal X953_18205 PF00764 Arginosuccinate synthase X953_18210 PF00893 Small Multidrug Resistance protein X953_18215 PF00893 Small Multidrug Resistance protein X953_18220 PF00440 Bacterial regulatory proteins, tetR family X953_18220 PF17934 Tetracyclin repressor-like, C-terminal domain X953_18230 PF01047 MarR family X953_18245 PF00730 HhH-GPD superfamily base excision DNA repair protein X953_18245 PF00633 Helix-hairpin-helix motif X953_18245 PF10576 Iron-sulfur binding domain of endonuclease III X953_18250 PF12849 PBP superfamily domain X953_18255 PF00528 Binding-protein-dependent transport system inner membrane component X953_18260 PF00528 Binding-protein-dependent transport system inner membrane component X953_18265 PF00005 ABC transporter X953_18275 PF03471 Transporter associated domain X953_18275 PF02080 TrkA-C domain X953_18275 PF00999 Sodium/hydrogen exchanger family X953_18280 PF01520 N-acetylmuramoyl-L-alanine amidase X953_18280 PF05036 Sporulation related domain X953_18295 PF04239 Protein of unknown function (DUF421) X953_18305 PF11553 Protein of unknown function (DUF3231) X953_18310 PF07690 Major Facilitator Superfamily X953_18330 PF00294 pfkB family carbohydrate kinase X953_18335 PF00356 Bacterial regulatory proteins, lacI family X953_18340 PF00367 phosphotransferase system, EIIB X953_18340 PF02378 Phosphotransferase system, EIIC X953_18345 PF00251 Glycosyl hydrolases family 32 N-terminal domain X953_18345 PF08244 Glycosyl hydrolases family 32 C terminal X953_18350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 X953_18355 PF16242 Pyridoxamine 5'-phosphate oxidase like X953_18360 PF00294 pfkB family carbohydrate kinase X953_18365 PF01156 Inosine-uridine preferring nucleoside hydrolase X953_18385 PF00581 Rhodanese-like domain X953_18390 PF01259 SAICAR synthetase X953_18395 PF01661 Macro domain X953_18420 PF03061 Thioesterase superfamily X953_18445 PF03466 LysR substrate binding domain X953_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X953_18455 PF00528 Binding-protein-dependent transport system inner membrane component X953_18460 PF03459 TOBE domain X953_18460 PF00005 ABC transporter X953_18475 PF00682 HMGL-like X953_18485 PF03123 CAT RNA binding domain X953_18485 PF00874 PRD domain X953_18490 PF00367 phosphotransferase system, EIIB X953_18490 PF02378 Phosphotransferase system, EIIC X953_18490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 X953_18495 PF03960 ArsC family X953_18510 PF13115 YtkA-like X953_18515 PF02630 SCO1/SenC X953_18520 PF00455 DeoR C terminal sensor domain X953_18520 PF08220 DeoR-like helix-turn-helix domain X953_18535 PF02683 Cytochrome C biogenesis protein transmembrane region X953_18540 PF00578 AhpC/TSA family X953_18545 PF00486 Transcriptional regulatory protein, C terminal X953_18545 PF00072 Response regulator receiver domain X953_18550 PF00512 His Kinase A (phospho-acceptor) domain X953_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_18550 PF00672 HAMP domain X953_18555 PF00801 PKD domain X953_18555 PF05547 Immune inhibitor A peptidase M6 X953_18560 PF00581 Rhodanese-like domain X953_18565 PF01925 Sulfite exporter TauE/SafE X953_18570 PF01206 Sulfurtransferase TusA X953_18575 PF00581 Rhodanese-like domain X953_18575 PF00753 Metallo-beta-lactamase superfamily X953_18580 PF13686 DsrE/DsrF/DrsH-like family X953_18585 PF01206 Sulfurtransferase TusA X953_18585 PF00581 Rhodanese-like domain X953_18590 PF00581 Rhodanese-like domain X953_18595 PF13686 DsrE/DsrF/DrsH-like family X953_18600 PF02583 Metal-sensitive transcriptional repressor X953_18610 PF00571 CBS domain X953_18610 PF03471 Transporter associated domain X953_18610 PF01595 Cyclin M transmembrane N-terminal domain X953_18620 PF08141 Small acid-soluble spore protein H family X953_18630 PF02146 Sir2 family X953_18635 PF14005 YpjP-like protein X953_18640 PF00581 Rhodanese-like domain X953_18640 PF00753 Metallo-beta-lactamase superfamily X953_18645 PF00583 Acetyltransferase (GNAT) family X953_18660 PF04293 SpoVR like protein X953_18670 PF04285 Protein of unknown function (DUF444) X953_18675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_18675 PF02770 Acyl-CoA dehydrogenase, middle domain X953_18675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_18680 PF00378 Enoyl-CoA hydratase/isomerase X953_18685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X953_18685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X953_18690 PF13193 AMP-binding enzyme C-terminal domain X953_18690 PF00501 AMP-binding enzyme X953_18695 PF00107 Zinc-binding dehydrogenase X953_18695 PF08240 Alcohol dehydrogenase GroES-like domain X953_18700 PF04029 2-phosphosulpholactate phosphatase X953_18715 PF00440 Bacterial regulatory proteins, tetR family X953_18725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X953_18725 PF02770 Acyl-CoA dehydrogenase, middle domain X953_18725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X953_18735 PF06798 PrkA serine protein kinase C-terminal domain X953_18735 PF08298 PrkA AAA domain X953_18750 PF09519 HindVP restriction endonuclease X953_18755 PF00145 C-5 cytosine-specific DNA methylase X953_18770 PF01476 LysM domain X953_18770 PF00877 NlpC/P60 family X953_18895 PF00574 Clp protease X953_18995 PF07508 Recombinase X953_18995 PF00239 Resolvase, N terminal domain X953_19000 PF08298 PrkA AAA domain X953_19000 PF06798 PrkA serine protein kinase C-terminal domain X953_19045 PF00005 ABC transporter X953_19050 PF01497 Periplasmic binding protein X953_19055 PF01032 FecCD transport family X953_19060 PF01032 FecCD transport family X953_19080 PF04204 Homoserine O-succinyltransferase X953_19090 PF00375 Sodium:dicarboxylate symporter family X953_19095 PF00701 Dihydrodipicolinate synthetase family X953_19100 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase X953_19105 PF00999 Sodium/hydrogen exchanger family X953_19110 PF07690 Major Facilitator Superfamily X953_19115 PF00571 CBS domain X953_19120 PF01047 MarR family X953_19130 PF00455 DeoR C terminal sensor domain X953_19130 PF08220 DeoR-like helix-turn-helix domain X953_19135 PF00294 pfkB family carbohydrate kinase X953_19140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X953_19140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit X953_19155 PF02829 3H domain X953_19155 PF08279 HTH domain X953_19160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain X953_19160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain X953_19185 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain X953_19185 PF01740 STAS domain X953_19205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain X953_19205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain X953_19210 PF02681 Divergent PAP2 family X953_19215 PF01546 Peptidase family M20/M25/M40 X953_19215 PF07687 Peptidase dimerisation domain X953_19240 PF00311 Phosphoenolpyruvate carboxylase X953_19245 PF00563 EAL domain X953_19245 PF12792 CSS motif domain associated with EAL X953_19255 PF12796 Ankyrin repeats (3 copies) X953_19265 PF07690 Major Facilitator Superfamily X953_19270 PF13460 NAD(P)H-binding X953_19290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system X953_19300 PF00732 GMC oxidoreductase X953_19300 PF05199 GMC oxidoreductase X953_19330 PF18766 SWI2/SNF2 ATPase X953_19330 PF11867 Domain of unknown function (DUF3387) X953_19330 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) X953_19335 PF01420 Type I restriction modification DNA specificity domain X953_19340 PF02384 N-6 DNA Methylase X953_19340 PF12161 HsdM N-terminal domain X953_19355 PF04002 RadC-like JAB domain X953_19355 PF12826 Helix-hairpin-helix motif X953_19390 PF07508 Recombinase X953_19390 PF00239 Resolvase, N terminal domain X953_19400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X953_19400 PF00874 PRD domain X953_19400 PF05043 Mga helix-turn-helix domain X953_19400 PF08279 HTH domain X953_19405 PF11975 Family 4 glycosyl hydrolase C-terminal domain X953_19405 PF02056 Family 4 glycosyl hydrolase X953_19410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit X953_19415 PF02378 Phosphotransferase system, EIIC X953_19420 PF04794 YdjC-like protein X953_19425 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit X953_19430 PF07075 Protein of unknown function (DUF1343) X953_19435 PF01638 HxlR-like helix-turn-helix X953_19455 PF00528 Binding-protein-dependent transport system inner membrane component X953_19465 PF00005 ABC transporter X953_19475 PF00149 Calcineurin-like phosphoesterase X953_19475 PF02872 5'-nucleotidase, C-terminal domain X953_19500 PF07486 Cell Wall Hydrolase X953_19515 PF02590 Predicted SPOUT methyltransferase X953_19525 PF01329 Pterin 4 alpha carbinolamine dehydratase X953_19540 PF01070 FMN-dependent dehydrogenase X953_19560 PF03707 Bacterial signalling protein N terminal repeat X953_19560 PF00563 EAL domain X953_19560 PF00990 Diguanylate cyclase, GGDEF domain X953_19600 PF00664 ABC transporter transmembrane region X953_19600 PF00005 ABC transporter X953_19610 PF13180 PDZ domain X953_19615 PF00753 Metallo-beta-lactamase superfamily X953_19620 PF09648 YycH protein X953_19625 PF07435 YycH protein X953_19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X953_19630 PF00672 HAMP domain X953_19630 PF00512 His Kinase A (phospho-acceptor) domain X953_19630 PF13426 PAS domain X953_19635 PF00486 Transcriptional regulatory protein, C terminal X953_19635 PF00072 Response regulator receiver domain X953_19645 PF00709 Adenylosuccinate synthetase X953_19650 PF03796 DnaB-like helicase C terminal domain X953_19650 PF00772 DnaB-like helicase N terminal domain X953_19655 PF01281 Ribosomal protein L9, N-terminal domain X953_19655 PF03948 Ribosomal protein L9, C-terminal domain X953_19660 PF01368 DHH family X953_19660 PF02272 DHHA1 domain X953_19665 PF09991 Predicted membrane protein (DUF2232) X953_19675 PF01084 Ribosomal protein S18 X953_19680 PF00436 Single-strand binding protein family X953_19685 PF01250 Ribosomal protein S6 X953_19690 PF06071 Protein of unknown function (DUF933) X953_19690 PF01926 50S ribosome-binding GTPase X953_19695 PF06107 Bacterial protein of unknown function (DUF951) X953_19700 PF00924 Mechanosensitive ion channel X953_19710 PF06866 Protein of unknown function (DUF1256) X953_19720 PF00266 Aminotransferase class-V X953_19725 PF17762 HTH domain found in ParB protein X953_19725 PF02195 ParB-like nuclease domain X953_19730 PF13614 AAA domain X953_19740 PF02195 ParB-like nuclease domain X953_19740 PF17762 HTH domain found in ParB protein X953_19745 PF02527 rRNA small subunit methyltransferase G X953_19750 PF13932 GidA associated domain X953_19750 PF01134 Glucose inhibited division protein A X953_19755 PF10396 GTP-binding protein TrmE N-terminus X953_19755 PF12631 MnmE helical domain X953_19755 PF01926 50S ribosome-binding GTPase X953_19765 PF14804 Jag N-terminus X953_19765 PF01424 R3H domain X953_19770 PF02096 60Kd inner membrane protein X953_19775 PF00825 Ribonuclease P X953_19890 PF00877 NlpC/P60 family X953_19905 PF00589 Phage integrase family X953_19930 PF01076 Plasmid recombination enzyme X953_19940 PF01446 Replication protein X953_19960 PF01076 Plasmid recombination enzyme