locus-tag class description JNUCC6_00030 PF00293 NUDIX domain JNUCC6_00035 PF00350 Dynamin family JNUCC6_00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_00050 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00055 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00060 PF00005 ABC transporter JNUCC6_00060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00065 PF00005 ABC transporter JNUCC6_00075 PF00892 EamA-like transporter family JNUCC6_00090 PF03575 Peptidase family S51 JNUCC6_00095 PF00293 NUDIX domain JNUCC6_00115 PF00293 NUDIX domain JNUCC6_00115 PF13344 Haloacid dehalogenase-like hydrolase JNUCC6_00130 PF01177 Asp/Glu/Hydantoin racemase JNUCC6_00170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JNUCC6_00170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JNUCC6_00185 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_00185 PF17932 Tetracyclin repressor-like, C-terminal domain JNUCC6_00190 PF07690 Major Facilitator Superfamily JNUCC6_00200 PF00005 ABC transporter JNUCC6_00200 PF12704 MacB-like periplasmic core domain JNUCC6_00200 PF02687 FtsX-like permease family JNUCC6_00205 PF00005 ABC transporter JNUCC6_00210 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_00210 PF00072 Response regulator receiver domain JNUCC6_00215 PF16736 Single Cache-like JNUCC6_00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_00215 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_00215 PF00989 PAS fold JNUCC6_00240 PF06491 Disulphide isomerase JNUCC6_00245 PF04445 Putative SAM-dependent methyltransferase JNUCC6_00260 PF14005 YpjP-like protein JNUCC6_00265 PF00303 Thymidylate synthase JNUCC6_00270 PF00186 Dihydrofolate reductase JNUCC6_00275 PF03006 Haemolysin-III related JNUCC6_00280 PF02645 Uncharacterised protein, DegV family COG1307 JNUCC6_00285 PF13472 GDSL-like Lipase/Acylhydrolase family JNUCC6_00295 PF01625 Peptide methionine sulfoxide reductase JNUCC6_00300 PF01641 SelR domain JNUCC6_00315 PF01053 Cys/Met metabolism PLP-dependent enzyme JNUCC6_00320 PF01053 Cys/Met metabolism PLP-dependent enzyme JNUCC6_00330 PF00672 HAMP domain JNUCC6_00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_00330 PF05227 CHASE3 domain JNUCC6_00335 PF06855 YozE SAM-like fold JNUCC6_00340 PF01048 Phosphorylase superfamily JNUCC6_00355 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JNUCC6_00360 PF12833 Helix-turn-helix domain JNUCC6_00360 PF02311 AraC-like ligand binding domain JNUCC6_00370 PF17820 PDZ domain JNUCC6_00370 PF03572 Peptidase family S41 JNUCC6_00370 PF01471 Putative peptidoglycan binding domain JNUCC6_00380 PF00188 Cysteine-rich secretory protein family JNUCC6_00385 PF03323 Bacillus/Clostridium GerA spore germination protein JNUCC6_00400 PF01554 MatE JNUCC6_00405 PF04101 Glycosyltransferase family 28 C-terminal domain JNUCC6_00405 PF03033 Glycosyltransferase family 28 N-terminal domain JNUCC6_00410 PF01872 RibD C-terminal domain JNUCC6_00420 PF01678 Diaminopimelate epimerase JNUCC6_00425 PF00563 EAL domain JNUCC6_00425 PF03707 Bacterial signalling protein N terminal repeat JNUCC6_00425 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_00430 PF00072 Response regulator receiver domain JNUCC6_00430 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_00435 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_00435 PF18719 ArlS sensor domain JNUCC6_00440 PF00676 Dehydrogenase E1 component JNUCC6_00440 PF02779 Transketolase, pyrimidine binding domain JNUCC6_00440 PF16078 2-oxoglutarate dehydrogenase N-terminus JNUCC6_00440 PF16870 2-oxoglutarate dehydrogenase C-terminal JNUCC6_00445 PF02817 e3 binding domain JNUCC6_00445 PF00364 Biotin-requiring enzyme JNUCC6_00445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNUCC6_00455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_00465 PF00188 Cysteine-rich secretory protein family JNUCC6_00470 PF00005 ABC transporter JNUCC6_00490 PF08713 DNA alkylation repair enzyme JNUCC6_00495 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_00495 PF05230 MASE2 domain JNUCC6_00500 PF18273 Type III R-M EcoP15I C-terminal domain JNUCC6_00500 PF01555 DNA methylase JNUCC6_00515 PF00005 ABC transporter JNUCC6_00520 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00525 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_00540 PF13382 Adenine deaminase C-terminal domain JNUCC6_00540 PF01979 Amidohydrolase family JNUCC6_00550 PF01653 NAD-dependent DNA ligase adenylation domain JNUCC6_00550 PF03120 NAD-dependent DNA ligase OB-fold domain JNUCC6_00550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JNUCC6_00550 PF12826 Helix-hairpin-helix motif JNUCC6_00550 PF00533 BRCA1 C Terminus (BRCT) domain JNUCC6_00555 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNUCC6_00560 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_00560 PF17151 Periplasmic sensor domain JNUCC6_00575 PF00753 Metallo-beta-lactamase superfamily JNUCC6_00575 PF00258 Flavodoxin JNUCC6_00580 PF02743 Cache domain JNUCC6_00580 PF00672 HAMP domain JNUCC6_00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_00590 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNUCC6_00590 PF05257 CHAP domain JNUCC6_00595 PF13536 Putative multidrug resistance efflux transporter JNUCC6_00610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_00610 PF03466 LysR substrate binding domain JNUCC6_00620 PF03717 Penicillin-binding Protein dimerisation domain JNUCC6_00620 PF03793 PASTA domain JNUCC6_00620 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_00630 PF00958 GMP synthase C terminal domain JNUCC6_00630 PF00117 Glutamine amidotransferase class-I JNUCC6_00630 PF02540 NAD synthase JNUCC6_00640 PF01547 Bacterial extracellular solute-binding protein JNUCC6_00645 PF01301 Glycosyl hydrolases family 35 JNUCC6_00650 PF00155 Aminotransferase class I and II JNUCC6_00650 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_00655 PF10787 Uncharacterised protein from bacillus cereus group JNUCC6_00660 PF04198 Putative sugar-binding domain JNUCC6_00685 PF02293 AmiS/UreI family transporter JNUCC6_00695 PF12823 Domain of unknown function (DUF3817) JNUCC6_00715 PF00324 Amino acid permease JNUCC6_00720 PF01546 Peptidase family M20/M25/M40 JNUCC6_00750 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_00750 PF00501 AMP-binding enzyme JNUCC6_00755 PF00083 Sugar (and other) transporter JNUCC6_00755 PF07690 Major Facilitator Superfamily JNUCC6_00765 PF00672 HAMP domain JNUCC6_00765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_00765 PF12729 Four helix bundle sensory module for signal transduction JNUCC6_00780 PF03466 LysR substrate binding domain JNUCC6_00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_00805 PF07687 Peptidase dimerisation domain JNUCC6_00805 PF01546 Peptidase family M20/M25/M40 JNUCC6_00810 PF00180 Isocitrate/isopropylmalate dehydrogenase JNUCC6_00820 PF00171 Aldehyde dehydrogenase family JNUCC6_00825 PF00005 ABC transporter JNUCC6_00825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00830 PF00005 ABC transporter JNUCC6_00835 PF03576 Peptidase family S58 JNUCC6_00840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_00845 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00850 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_00850 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00860 PF00171 Aldehyde dehydrogenase family JNUCC6_00865 PF00202 Aminotransferase class-III JNUCC6_00890 PF01047 MarR family JNUCC6_00895 PF07690 Major Facilitator Superfamily JNUCC6_00900 PF17755 UvrA DNA-binding domain JNUCC6_00900 PF00005 ABC transporter JNUCC6_00900 PF17760 UvrA interaction domain JNUCC6_00945 PF00271 Helicase conserved C-terminal domain JNUCC6_00945 PF00270 DEAD/DEAH box helicase JNUCC6_00945 PF00570 HRDC domain JNUCC6_00945 PF16124 RecQ zinc-binding JNUCC6_00945 PF09382 RQC domain JNUCC6_00955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_00960 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00965 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_00965 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_00970 PF00005 ABC transporter JNUCC6_00970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_00975 PF00005 ABC transporter JNUCC6_00985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNUCC6_00985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNUCC6_00990 PF01261 Xylose isomerase-like TIM barrel JNUCC6_00995 PF00480 ROK family JNUCC6_01010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JNUCC6_01010 PF00953 Glycosyl transferase family 4 JNUCC6_01020 PF07728 AAA domain (dynein-related subfamily) JNUCC6_01025 PF00092 von Willebrand factor type A domain JNUCC6_01035 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_01045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNUCC6_01045 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNUCC6_01055 PF00248 Aldo/keto reductase family JNUCC6_01060 PF00248 Aldo/keto reductase family JNUCC6_01080 PF00072 Response regulator receiver domain JNUCC6_01080 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_01085 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_01090 PF00005 ABC transporter JNUCC6_01115 PF01425 Amidase JNUCC6_01125 PF01872 RibD C-terminal domain JNUCC6_01130 PF09962 Uncharacterized conserved protein (DUF2196) JNUCC6_01135 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_01135 PF00672 HAMP domain JNUCC6_01140 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_01140 PF00072 Response regulator receiver domain JNUCC6_01145 PF00561 alpha/beta hydrolase fold JNUCC6_01150 PF00583 Acetyltransferase (GNAT) family JNUCC6_01155 PF01225 Mur ligase family, catalytic domain JNUCC6_01155 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_01155 PF08245 Mur ligase middle domain JNUCC6_01160 PF01047 MarR family JNUCC6_01160 PF00583 Acetyltransferase (GNAT) family JNUCC6_01165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_01170 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_01175 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_01175 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_01180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_01180 PF00005 ABC transporter JNUCC6_01185 PF00005 ABC transporter JNUCC6_01185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_01190 PF00557 Metallopeptidase family M24 JNUCC6_01190 PF01321 Creatinase/Prolidase N-terminal domain JNUCC6_01200 PF00005 ABC transporter JNUCC6_01225 PF07690 Major Facilitator Superfamily JNUCC6_01230 PF01810 LysE type translocator JNUCC6_01235 PF00155 Aminotransferase class I and II JNUCC6_01235 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_01255 PF02096 60Kd inner membrane protein JNUCC6_01265 PF01636 Phosphotransferase enzyme family JNUCC6_01270 PF04463 Protein of unknown function (DUF523) JNUCC6_01275 PF05975 Bacterial ABC transporter protein EcsB JNUCC6_01280 PF05816 Toxic anion resistance protein (TelA) JNUCC6_01285 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein JNUCC6_01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_01290 PF17200 Single Cache domain 2 JNUCC6_01290 PF00672 HAMP domain JNUCC6_01300 PF00313 'Cold-shock' DNA-binding domain JNUCC6_01310 PF04199 Putative cyclase JNUCC6_01315 PF03301 Tryptophan 2,3-dioxygenase JNUCC6_01320 PF00266 Aminotransferase class-V JNUCC6_01325 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_01325 PF08360 QacR-like protein, C-terminal region JNUCC6_01340 PF17369 Family of unknown function (DUF5391) JNUCC6_01355 PF00535 Glycosyl transferase family 2 JNUCC6_01355 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JNUCC6_01365 PF01047 MarR family JNUCC6_01385 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_01395 PF13333 Integrase core domain JNUCC6_01395 PF00665 Integrase core domain JNUCC6_01400 PF12848 ABC transporter JNUCC6_01400 PF00005 ABC transporter JNUCC6_01405 PF00107 Zinc-binding dehydrogenase JNUCC6_01405 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_01410 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_01415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_01415 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_01415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_01420 PF02515 CoA-transferase family III JNUCC6_01425 PF00753 Metallo-beta-lactamase superfamily JNUCC6_01430 PF00171 Aldehyde dehydrogenase family JNUCC6_01435 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_01435 PF00107 Zinc-binding dehydrogenase JNUCC6_01445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNUCC6_01450 PF00571 CBS domain JNUCC6_01450 PF00005 ABC transporter JNUCC6_01470 PF11188 Protein of unknown function (DUF2975) JNUCC6_01475 PF13443 Cro/C1-type HTH DNA-binding domain JNUCC6_01485 PF00135 Carboxylesterase family JNUCC6_01500 PF00106 short chain dehydrogenase JNUCC6_01505 PF00425 chorismate binding enzyme JNUCC6_01510 PF00501 AMP-binding enzyme JNUCC6_01510 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_01515 PF00857 Isochorismatase family JNUCC6_01515 PF00550 Phosphopantetheine attachment site JNUCC6_01520 PF00550 Phosphopantetheine attachment site JNUCC6_01520 PF00668 Condensation domain JNUCC6_01520 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_01520 PF00501 AMP-binding enzyme JNUCC6_01520 PF00975 Thioesterase domain JNUCC6_01525 PF03621 MbtH-like protein JNUCC6_01530 PF07690 Major Facilitator Superfamily JNUCC6_01535 PF01648 4'-phosphopantetheinyl transferase superfamily JNUCC6_01540 PF01497 Periplasmic binding protein JNUCC6_01545 PF12833 Helix-turn-helix domain JNUCC6_01545 PF07883 Cupin domain JNUCC6_01555 PF01522 Polysaccharide deacetylase JNUCC6_01565 PF00909 Ammonium Transporter Family JNUCC6_01575 PF11490 DNA polymerase III polC-type N-terminus II JNUCC6_01575 PF00929 Exonuclease JNUCC6_01575 PF02811 PHP domain JNUCC6_01575 PF14579 Helix-hairpin-helix motif JNUCC6_01575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNUCC6_01575 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNUCC6_01575 PF01336 OB-fold nucleic acid binding domain JNUCC6_01580 PF01048 Phosphorylase superfamily JNUCC6_01590 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_01590 PF07702 UTRA domain JNUCC6_01600 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNUCC6_01610 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JNUCC6_01625 PF00072 Response regulator receiver domain JNUCC6_01625 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_01630 PF13426 PAS domain JNUCC6_01630 PF00672 HAMP domain JNUCC6_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_01630 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_01640 PF00690 Cation transporter/ATPase, N-terminus JNUCC6_01640 PF00689 Cation transporting ATPase, C-terminus JNUCC6_01645 PF00860 Permease family JNUCC6_01650 PF02976 DNA mismatch repair enzyme MutH JNUCC6_01660 PF00145 C-5 cytosine-specific DNA methylase JNUCC6_01665 PF02545 Maf-like protein JNUCC6_01675 PF01381 Helix-turn-helix JNUCC6_01685 PF06445 GyrI-like small molecule binding domain JNUCC6_01690 PF07730 Histidine kinase JNUCC6_01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_01695 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_01695 PF00072 Response regulator receiver domain JNUCC6_01700 PF12146 Serine aminopeptidase, S33 JNUCC6_01710 PF00712 DNA polymerase III beta subunit, N-terminal domain JNUCC6_01710 PF02767 DNA polymerase III beta subunit, central domain JNUCC6_01710 PF02768 DNA polymerase III beta subunit, C-terminal domain JNUCC6_01725 PF01734 Patatin-like phospholipase JNUCC6_01730 PF00326 Prolyl oligopeptidase family JNUCC6_01735 PF13539 D-alanyl-D-alanine carboxypeptidase JNUCC6_01740 PF01624 MutS domain I JNUCC6_01740 PF05190 MutS family domain IV JNUCC6_01740 PF00488 MutS domain V JNUCC6_01740 PF05192 MutS domain III JNUCC6_01740 PF05188 MutS domain II JNUCC6_01810 PF07690 Major Facilitator Superfamily JNUCC6_01820 PF08361 MAATS-type transcriptional repressor, C-terminal region JNUCC6_01820 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_01885 PF12146 Serine aminopeptidase, S33 JNUCC6_01890 PF10903 Protein of unknown function (DUF2691) JNUCC6_01895 PF04542 Sigma-70 region 2 JNUCC6_01895 PF08281 Sigma-70, region 4 JNUCC6_01905 PF12833 Helix-turn-helix domain JNUCC6_01925 PF12697 Alpha/beta hydrolase family JNUCC6_01945 PF01522 Polysaccharide deacetylase JNUCC6_01960 PF07859 alpha/beta hydrolase fold JNUCC6_01960 PF00934 PE family JNUCC6_01965 PF00171 Aldehyde dehydrogenase family JNUCC6_01975 PF02586 SOS response associated peptidase (SRAP) JNUCC6_02000 PF01068 ATP dependent DNA ligase domain JNUCC6_02010 PF03073 TspO/MBR family JNUCC6_02020 PF00534 Glycosyl transferases group 1 JNUCC6_02020 PF13439 Glycosyltransferase Family 4 JNUCC6_02030 PF00535 Glycosyl transferase family 2 JNUCC6_02035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JNUCC6_02035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JNUCC6_02035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JNUCC6_02040 PF01061 ABC-2 type transporter JNUCC6_02045 PF00005 ABC transporter JNUCC6_02050 PF12697 Alpha/beta hydrolase family JNUCC6_02055 PF00072 Response regulator receiver domain JNUCC6_02055 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_02065 PF02525 Flavodoxin-like fold JNUCC6_02070 PF02578 Multi-copper polyphenol oxidoreductase laccase JNUCC6_02075 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_02080 PF07690 Major Facilitator Superfamily JNUCC6_02085 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_02085 PF08447 PAS fold JNUCC6_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_02085 PF00989 PAS fold JNUCC6_02090 PF00271 Helicase conserved C-terminal domain JNUCC6_02090 PF04434 SWIM zinc finger JNUCC6_02090 PF00176 SNF2 family N-terminal domain JNUCC6_02095 PF00398 Ribosomal RNA adenine dimethylase JNUCC6_02105 PF07702 UTRA domain JNUCC6_02105 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_02110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNUCC6_02115 PF13580 SIS domain JNUCC6_02120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNUCC6_02125 PF03611 PTS system sugar-specific permease component JNUCC6_02130 PF00381 PTS HPr component phosphorylation site JNUCC6_02135 PF05524 PEP-utilising enzyme, N-terminal JNUCC6_02135 PF00391 PEP-utilising enzyme, mobile domain JNUCC6_02135 PF02896 PEP-utilising enzyme, TIM barrel domain JNUCC6_02140 PF07561 Domain of Unknown Function (DUF1540) JNUCC6_02145 PF13028 Protein of unknown function (DUF3889) JNUCC6_02150 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_02155 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02160 PF00005 ABC transporter JNUCC6_02170 PF01523 Putative modulator of DNA gyrase JNUCC6_02175 PF01523 Putative modulator of DNA gyrase JNUCC6_02185 PF07859 alpha/beta hydrolase fold JNUCC6_02195 PF13302 Acetyltransferase (GNAT) domain JNUCC6_02200 PF00300 Histidine phosphatase superfamily (branch 1) JNUCC6_02205 PF02915 Rubrerythrin JNUCC6_02225 PF01547 Bacterial extracellular solute-binding protein JNUCC6_02275 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_02280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNUCC6_02280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNUCC6_02285 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02290 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02295 PF01547 Bacterial extracellular solute-binding protein JNUCC6_02305 PF01979 Amidohydrolase family JNUCC6_02310 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_02310 PF07702 UTRA domain JNUCC6_02315 PF01116 Fructose-bisphosphate aldolase class-II JNUCC6_02320 PF00294 pfkB family carbohydrate kinase JNUCC6_02325 PF01380 SIS domain JNUCC6_02330 PF00480 ROK family JNUCC6_02340 PF03459 TOBE domain JNUCC6_02340 PF17912 MalK OB fold domain JNUCC6_02340 PF00005 ABC transporter JNUCC6_02345 PF13556 PucR C-terminal helix-turn-helix domain JNUCC6_02355 PF01297 Zinc-uptake complex component A periplasmic JNUCC6_02360 PF00005 ABC transporter JNUCC6_02365 PF00950 ABC 3 transport family JNUCC6_02370 PF00950 ABC 3 transport family JNUCC6_02380 PF00701 Dihydrodipicolinate synthetase family JNUCC6_02385 PF00158 Sigma-54 interaction domain JNUCC6_02385 PF13426 PAS domain JNUCC6_02385 PF02954 Bacterial regulatory protein, Fis family JNUCC6_02395 PF02347 Glycine cleavage system P-protein JNUCC6_02400 PF00266 Aminotransferase class-V JNUCC6_02405 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_02410 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02415 PF00005 ABC transporter JNUCC6_02420 PF01546 Peptidase family M20/M25/M40 JNUCC6_02430 PF03606 C4-dicarboxylate anaerobic carrier JNUCC6_02435 PF01546 Peptidase family M20/M25/M40 JNUCC6_02435 PF07687 Peptidase dimerisation domain JNUCC6_02445 PF03323 Bacillus/Clostridium GerA spore germination protein JNUCC6_02450 PF05504 Spore germination B3/ GerAC like, C-terminal JNUCC6_02470 PF08003 Protein of unknown function (DUF1698) JNUCC6_02480 PF01625 Peptide methionine sulfoxide reductase JNUCC6_02485 PF03816 Cell envelope-related transcriptional attenuator domain JNUCC6_02490 PF01594 AI-2E family transporter JNUCC6_02495 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNUCC6_02495 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNUCC6_02500 PF01960 ArgJ family JNUCC6_02505 PF00696 Amino acid kinase family JNUCC6_02510 PF00202 Aminotransferase class-III JNUCC6_02525 PF00155 Aminotransferase class I and II JNUCC6_02530 PF02397 Bacterial sugar transferase JNUCC6_02535 PF00534 Glycosyl transferases group 1 JNUCC6_02535 PF13439 Glycosyltransferase Family 4 JNUCC6_02540 PF16363 GDP-mannose 4,6 dehydratase JNUCC6_02545 PF04204 Homoserine O-succinyltransferase JNUCC6_02560 PF01048 Phosphorylase superfamily JNUCC6_02565 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_02565 PF16859 Tetracyclin repressor-like, C-terminal domain JNUCC6_02575 PF00005 ABC transporter JNUCC6_02585 PF02553 Cobalt transport protein component CbiN JNUCC6_02590 PF01891 Cobalt uptake substrate-specific transmembrane region JNUCC6_02600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_02600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JNUCC6_02605 PF01903 CbiX JNUCC6_02610 PF02571 Precorrin-6x reductase CbiJ/CobK JNUCC6_02615 PF02570 Precorrin-8X methylmutase JNUCC6_02620 PF01888 CbiD JNUCC6_02625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_02630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_02635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_02640 PF11761 Cobalamin biosynthesis central region JNUCC6_02640 PF11760 Cobalamin synthesis G N-terminal JNUCC6_02640 PF01890 Cobalamin synthesis G C-terminus JNUCC6_02645 PF07685 CobB/CobQ-like glutamine amidotransferase domain JNUCC6_02645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JNUCC6_02650 PF14824 Sirohaem biosynthesis protein central JNUCC6_02655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_02665 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JNUCC6_02670 PF07685 CobB/CobQ-like glutamine amidotransferase domain JNUCC6_02670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JNUCC6_02680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JNUCC6_02680 PF00326 Prolyl oligopeptidase family JNUCC6_02695 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_02695 PF00501 AMP-binding enzyme JNUCC6_02705 PF01554 MatE JNUCC6_02710 PF01381 Helix-turn-helix JNUCC6_02715 PF00005 ABC transporter JNUCC6_02715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_02720 PF00005 ABC transporter JNUCC6_02720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_02725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_02730 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02735 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_02735 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_02745 PF12833 Helix-turn-helix domain JNUCC6_02755 PF00425 chorismate binding enzyme JNUCC6_02755 PF04715 Anthranilate synthase component I, N terminal region JNUCC6_02760 PF00591 Glycosyl transferase family, a/b domain JNUCC6_02760 PF02885 Glycosyl transferase family, helical bundle domain JNUCC6_02765 PF00218 Indole-3-glycerol phosphate synthase JNUCC6_02770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JNUCC6_02775 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_02780 PF00290 Tryptophan synthase alpha chain JNUCC6_02785 PF00194 Eukaryotic-type carbonic anhydrase JNUCC6_02795 PF00474 Sodium:solute symporter family JNUCC6_02800 PF04341 Protein of unknown function, DUF485 JNUCC6_02805 PF01554 MatE JNUCC6_02810 PF00583 Acetyltransferase (GNAT) family JNUCC6_02815 PF06445 GyrI-like small molecule binding domain JNUCC6_02815 PF13411 MerR HTH family regulatory protein JNUCC6_02830 PF00753 Metallo-beta-lactamase superfamily JNUCC6_02840 PF00589 Phage integrase family JNUCC6_02840 PF02899 Phage integrase, N-terminal SAM-like domain JNUCC6_02845 PF13302 Acetyltransferase (GNAT) domain JNUCC6_02850 PF00360 Phytochrome region JNUCC6_02850 PF01590 GAF domain JNUCC6_02850 PF00563 EAL domain JNUCC6_02850 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_02855 PF04199 Putative cyclase JNUCC6_02860 PF00583 Acetyltransferase (GNAT) family JNUCC6_02865 PF02626 Carboxyltransferase domain, subdomain A and B JNUCC6_02870 PF02682 Carboxyltransferase domain, subdomain C and D JNUCC6_02875 PF03746 LamB/YcsF family JNUCC6_02880 PF01566 Natural resistance-associated macrophage protein JNUCC6_02885 PF07286 Protein of unknown function (DUF1445) JNUCC6_02895 PF00474 Sodium:solute symporter family JNUCC6_02920 PF00005 ABC transporter JNUCC6_02930 PF01921 tRNA synthetases class I (K) JNUCC6_02935 PF00082 Subtilase family JNUCC6_02955 PF04715 Anthranilate synthase component I, N terminal region JNUCC6_02955 PF00425 chorismate binding enzyme JNUCC6_02960 PF00117 Glutamine amidotransferase class-I JNUCC6_02985 PF16123 Hydroxyacylglutathione hydrolase C-terminus JNUCC6_02985 PF00753 Metallo-beta-lactamase superfamily JNUCC6_02990 PF01476 LysM domain JNUCC6_02990 PF00704 Glycosyl hydrolases family 18 JNUCC6_03000 PF14139 YpzG-like protein JNUCC6_03005 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_03010 PF00005 ABC transporter JNUCC6_03020 PF00293 NUDIX domain JNUCC6_03020 PF09297 NADH pyrophosphatase zinc ribbon domain JNUCC6_03025 PF08241 Methyltransferase domain JNUCC6_03040 PF03816 Cell envelope-related transcriptional attenuator domain JNUCC6_03045 PF13291 ACT domain JNUCC6_03045 PF04607 Region found in RelA / SpoT proteins JNUCC6_03045 PF02824 TGS domain JNUCC6_03065 PF02040 Arsenical pump membrane protein JNUCC6_03075 PF03551 Transcriptional regulator PadR-like family JNUCC6_03080 PF02190 ATP-dependent protease La (LON) substrate-binding domain JNUCC6_03080 PF05362 Lon protease (S16) C-terminal proteolytic domain JNUCC6_03080 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_03095 PF08264 Anticodon-binding domain of tRNA JNUCC6_03095 PF00133 tRNA synthetases class I (I, L, M and V) JNUCC6_03105 PF00171 Aldehyde dehydrogenase family JNUCC6_03120 PF00583 Acetyltransferase (GNAT) family JNUCC6_03135 PF03062 MBOAT, membrane-bound O-acyltransferase family JNUCC6_03140 PF00805 Pentapeptide repeats (8 copies) JNUCC6_03145 PF00293 NUDIX domain JNUCC6_03160 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_03160 PF00155 Aminotransferase class I and II JNUCC6_03165 PF01820 D-ala D-ala ligase N-terminus JNUCC6_03165 PF07478 D-ala D-ala ligase C-terminus JNUCC6_03185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JNUCC6_03185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JNUCC6_03195 PF00005 ABC transporter JNUCC6_03200 PF01032 FecCD transport family JNUCC6_03230 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_03235 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_03235 PF00107 Zinc-binding dehydrogenase JNUCC6_03245 PF12833 Helix-turn-helix domain JNUCC6_03250 PF01810 LysE type translocator JNUCC6_03260 PF16123 Hydroxyacylglutathione hydrolase C-terminus JNUCC6_03260 PF00753 Metallo-beta-lactamase superfamily JNUCC6_03275 PF17760 UvrA interaction domain JNUCC6_03275 PF17755 UvrA DNA-binding domain JNUCC6_03280 PF01022 Bacterial regulatory protein, arsR family JNUCC6_03295 PF10502 Signal peptidase, peptidase S26 JNUCC6_03305 PF05163 DinB family JNUCC6_03315 PF13302 Acetyltransferase (GNAT) domain JNUCC6_03325 PF07690 Major Facilitator Superfamily JNUCC6_03340 PF04545 Sigma-70, region 4 JNUCC6_03340 PF04542 Sigma-70 region 2 JNUCC6_03345 PF00583 Acetyltransferase (GNAT) family JNUCC6_03350 PF01344 Kelch motif JNUCC6_03355 PF00754 F5/8 type C domain JNUCC6_03355 PF13088 BNR repeat-like domain JNUCC6_03355 PF02973 Sialidase, N-terminal domain JNUCC6_03360 PF01380 SIS domain JNUCC6_03360 PF01418 Helix-turn-helix domain, rpiR family JNUCC6_03365 PF00480 ROK family JNUCC6_03370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JNUCC6_03375 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_03380 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_03385 PF01547 Bacterial extracellular solute-binding protein JNUCC6_03395 PF00701 Dihydrodipicolinate synthetase family JNUCC6_03405 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_03405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNUCC6_03410 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JNUCC6_03425 PF10898 Protein of unknown function (DUF2716) JNUCC6_03445 PF00583 Acetyltransferase (GNAT) family JNUCC6_03460 PF01047 MarR family JNUCC6_03465 PF00881 Nitroreductase family JNUCC6_03470 PF00190 Cupin JNUCC6_03480 PF07690 Major Facilitator Superfamily JNUCC6_03485 PF00005 ABC transporter JNUCC6_03495 PF03610 PTS system fructose IIA component JNUCC6_03500 PF02734 DAK2 domain JNUCC6_03505 PF02733 Dak1 domain JNUCC6_03520 PF00072 Response regulator receiver domain JNUCC6_03520 PF04703 FaeA-like protein JNUCC6_03525 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JNUCC6_03525 PF17203 Single cache domain 3 JNUCC6_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_03530 PF03480 Bacterial extracellular solute-binding protein, family 7 JNUCC6_03535 PF00375 Sodium:dicarboxylate symporter family JNUCC6_03540 PF00375 Sodium:dicarboxylate symporter family JNUCC6_03545 PF00296 Luciferase-like monooxygenase JNUCC6_03550 PF05979 Bacterial protein of unknown function (DUF896) JNUCC6_03580 PF00692 dUTPase JNUCC6_03585 PF00268 Ribonucleotide reductase, small chain JNUCC6_03590 PF08343 Ribonucleotide reductase N-terminal JNUCC6_03590 PF00317 Ribonucleotide reductase, all-alpha domain JNUCC6_03590 PF02867 Ribonucleotide reductase, barrel domain JNUCC6_03595 PF07972 NrdI Flavodoxin like JNUCC6_03640 PF03989 DNA gyrase C-terminal domain, beta-propeller JNUCC6_03640 PF00521 DNA gyrase/topoisomerase IV, subunit A JNUCC6_03645 PF00986 DNA gyrase B subunit, carboxyl terminus JNUCC6_03645 PF01751 Toprim domain JNUCC6_03645 PF00204 DNA gyrase B JNUCC6_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_03650 PF02660 Glycerol-3-phosphate acyltransferase JNUCC6_03655 PF01521 Iron-sulphur cluster biosynthesis JNUCC6_03665 PF03061 Thioesterase superfamily JNUCC6_03670 PF00246 Zinc carboxypeptidase JNUCC6_03675 PF00330 Aconitase family (aconitate hydratase) JNUCC6_03675 PF00694 Aconitase C-terminal domain JNUCC6_03680 PF02589 LUD domain JNUCC6_03685 PF02589 LUD domain JNUCC6_03685 PF13183 4Fe-4S dicluster domain JNUCC6_03685 PF11870 Domain of unknown function (DUF3390) JNUCC6_03690 PF02754 Cysteine-rich domain JNUCC6_03695 PF07729 FCD domain JNUCC6_03695 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_03700 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_03705 PF00893 Small Multidrug Resistance protein JNUCC6_03710 PF00893 Small Multidrug Resistance protein JNUCC6_03720 PF13302 Acetyltransferase (GNAT) domain JNUCC6_03725 PF00694 Aconitase C-terminal domain JNUCC6_03730 PF00330 Aconitase family (aconitate hydratase) JNUCC6_03735 PF00180 Isocitrate/isopropylmalate dehydrogenase JNUCC6_03740 PF08502 LeuA allosteric (dimerisation) domain JNUCC6_03740 PF00682 HMGL-like JNUCC6_03745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JNUCC6_03745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JNUCC6_03750 PF10369 Small subunit of acetolactate synthase JNUCC6_03750 PF01842 ACT domain JNUCC6_03755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNUCC6_03755 PF00205 Thiamine pyrophosphate enzyme, central domain JNUCC6_03755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNUCC6_03760 PF00920 Dehydratase family JNUCC6_03765 PF01063 Amino-transferase class IV JNUCC6_03770 PF01565 FAD binding domain JNUCC6_03770 PF04030 D-arabinono-1,4-lactone oxidase JNUCC6_03780 PF00857 Isochorismatase family JNUCC6_03800 PF07690 Major Facilitator Superfamily JNUCC6_03805 PF01741 Large-conductance mechanosensitive channel, MscL JNUCC6_03810 PF02630 SCO1/SenC JNUCC6_03830 PF11084 Protein of unknown function (DUF2621) JNUCC6_03835 PF07301 Protein of unknown function (DUF1453) JNUCC6_03840 PF00072 Response regulator receiver domain JNUCC6_03845 PF02683 Cytochrome C biogenesis protein transmembrane region JNUCC6_03855 PF00664 ABC transporter transmembrane region JNUCC6_03855 PF00005 ABC transporter JNUCC6_03860 PF00005 ABC transporter JNUCC6_03860 PF00664 ABC transporter transmembrane region JNUCC6_03875 PF03323 Bacillus/Clostridium GerA spore germination protein JNUCC6_03890 PF14698 Argininosuccinate lyase C-terminal JNUCC6_03890 PF00206 Lyase JNUCC6_03895 PF00764 Arginosuccinate synthase JNUCC6_03900 PF00106 short chain dehydrogenase JNUCC6_03905 PF00753 Metallo-beta-lactamase superfamily JNUCC6_03910 PF03807 NADP oxidoreductase coenzyme F420-dependent JNUCC6_03910 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNUCC6_03915 PF00535 Glycosyl transferase family 2 JNUCC6_03920 PF02719 Polysaccharide biosynthesis protein JNUCC6_03920 PF08485 Polysaccharide biosynthesis protein C-terminal JNUCC6_03935 PF00583 Acetyltransferase (GNAT) family JNUCC6_03940 PF13302 Acetyltransferase (GNAT) domain JNUCC6_03975 PF14398 YheC/D like ATP-grasp JNUCC6_03990 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_04000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_04015 PF03466 LysR substrate binding domain JNUCC6_04025 PF18389 TrmO C-terminal domain JNUCC6_04025 PF01980 tRNA-methyltransferase O JNUCC6_04030 PF17676 LD-carboxypeptidase C-terminal domain JNUCC6_04030 PF02016 LD-carboxypeptidase N-terminal domain JNUCC6_04040 PF13443 Cro/C1-type HTH DNA-binding domain JNUCC6_04045 PF11188 Protein of unknown function (DUF2975) JNUCC6_04050 PF11188 Protein of unknown function (DUF2975) JNUCC6_04070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNUCC6_04090 PF11553 Protein of unknown function (DUF3231) JNUCC6_04095 PF02567 Phenazine biosynthesis-like protein JNUCC6_04100 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_04100 PF00155 Aminotransferase class I and II JNUCC6_04105 PF04299 Putative FMN-binding domain JNUCC6_04110 PF00583 Acetyltransferase (GNAT) family JNUCC6_04115 PF01047 MarR family JNUCC6_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_04135 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_04140 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_04140 PF00072 Response regulator receiver domain JNUCC6_04155 PF01966 HD domain JNUCC6_04170 PF04542 Sigma-70 region 2 JNUCC6_04170 PF08281 Sigma-70, region 4 JNUCC6_04185 PF13280 WYL domain JNUCC6_04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_04230 PF03466 LysR substrate binding domain JNUCC6_04245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNUCC6_04265 PF07969 Amidohydrolase family JNUCC6_04270 PF07969 Amidohydrolase family JNUCC6_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_04275 PF03466 LysR substrate binding domain JNUCC6_04320 PF02567 Phenazine biosynthesis-like protein JNUCC6_04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_04330 PF03466 LysR substrate binding domain JNUCC6_04335 PF07690 Major Facilitator Superfamily JNUCC6_04350 PF01266 FAD dependent oxidoreductase JNUCC6_04360 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_04360 PF05569 BlaR1 peptidase M56 JNUCC6_04370 PF00557 Metallopeptidase family M24 JNUCC6_04375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JNUCC6_04380 PF13476 AAA domain JNUCC6_04385 PF12320 Type 5 capsule protein repressor C-terminal domain JNUCC6_04385 PF00149 Calcineurin-like phosphoesterase JNUCC6_04395 PF02361 Cobalt transport protein JNUCC6_04400 PF00005 ABC transporter JNUCC6_04405 PF00005 ABC transporter JNUCC6_04420 PF13452 N-terminal half of MaoC dehydratase JNUCC6_04425 PF02803 Thiolase, C-terminal domain JNUCC6_04425 PF00108 Thiolase, N-terminal domain JNUCC6_04430 PF00501 AMP-binding enzyme JNUCC6_04430 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_04435 PF02632 BioY family JNUCC6_04440 PF00209 Sodium:neurotransmitter symporter family JNUCC6_04445 PF07690 Major Facilitator Superfamily JNUCC6_04450 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_04470 PF03009 Glycerophosphoryl diester phosphodiesterase family JNUCC6_04495 PF00005 ABC transporter JNUCC6_04500 PF13411 MerR HTH family regulatory protein JNUCC6_04535 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_04535 PF00155 Aminotransferase class I and II JNUCC6_04540 PF00005 ABC transporter JNUCC6_04560 PF00491 Arginase family JNUCC6_04565 PF17284 Spermidine synthase tetramerisation domain JNUCC6_04570 PF02675 S-adenosylmethionine decarboxylase JNUCC6_04575 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JNUCC6_04575 PF01276 Orn/Lys/Arg decarboxylase, major domain JNUCC6_04580 PF00438 S-adenosylmethionine synthetase, N-terminal domain JNUCC6_04580 PF02772 S-adenosylmethionine synthetase, central domain JNUCC6_04580 PF02773 S-adenosylmethionine synthetase, C-terminal domain JNUCC6_04615 PF00672 HAMP domain JNUCC6_04615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_04615 PF17202 Single cache domain 3 JNUCC6_04620 PF02743 Cache domain JNUCC6_04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_04620 PF00672 HAMP domain JNUCC6_04635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_04640 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_04645 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_04645 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_04650 PF00005 ABC transporter JNUCC6_04650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_04655 PF00005 ABC transporter JNUCC6_04655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_04710 PF00171 Aldehyde dehydrogenase family JNUCC6_04715 PF01472 PUA domain JNUCC6_04715 PF00696 Amino acid kinase family JNUCC6_04725 PF03358 NADPH-dependent FMN reductase JNUCC6_04735 PF12867 DinB superfamily JNUCC6_04740 PF07687 Peptidase dimerisation domain JNUCC6_04740 PF01546 Peptidase family M20/M25/M40 JNUCC6_04745 PF03928 Haem-degrading JNUCC6_04755 PF07690 Major Facilitator Superfamily JNUCC6_04765 PF02557 D-alanyl-D-alanine carboxypeptidase JNUCC6_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_04770 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_04775 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_04775 PF00072 Response regulator receiver domain JNUCC6_04780 PF01751 Toprim domain JNUCC6_04780 PF01131 DNA topoisomerase JNUCC6_04795 PF00465 Iron-containing alcohol dehydrogenase JNUCC6_04800 PF00171 Aldehyde dehydrogenase family JNUCC6_04810 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_04820 PF00892 EamA-like transporter family JNUCC6_04825 PF01337 Barstar (barnase inhibitor) JNUCC6_04830 PF01381 Helix-turn-helix JNUCC6_04830 PF07883 Cupin domain JNUCC6_04835 PF01810 LysE type translocator JNUCC6_04840 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_04840 PF00155 Aminotransferase class I and II JNUCC6_04845 PF03551 Transcriptional regulator PadR-like family JNUCC6_04865 PF07690 Major Facilitator Superfamily JNUCC6_04870 PF01226 Formate/nitrite transporter JNUCC6_04875 PF07702 UTRA domain JNUCC6_04875 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_04880 PF07690 Major Facilitator Superfamily JNUCC6_04885 PF01048 Phosphorylase superfamily JNUCC6_04910 PF01061 ABC-2 type transporter JNUCC6_04915 PF00005 ABC transporter JNUCC6_04915 PF13732 Domain of unknown function (DUF4162) JNUCC6_04920 PF13302 Acetyltransferase (GNAT) domain JNUCC6_04955 PF01596 O-methyltransferase JNUCC6_04970 PF17934 Tetracyclin repressor-like, C-terminal domain JNUCC6_04970 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_04975 PF00893 Small Multidrug Resistance protein JNUCC6_04980 PF00893 Small Multidrug Resistance protein JNUCC6_05025 PF03605 Anaerobic c4-dicarboxylate membrane transporter JNUCC6_05030 PF01048 Phosphorylase superfamily JNUCC6_05035 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_05040 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_05045 PF01547 Bacterial extracellular solute-binding protein JNUCC6_05050 PF12833 Helix-turn-helix domain JNUCC6_05055 PF01048 Phosphorylase superfamily JNUCC6_05075 PF02687 FtsX-like permease family JNUCC6_05080 PF00005 ABC transporter JNUCC6_05085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_05090 PF00072 Response regulator receiver domain JNUCC6_05090 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_05095 PF00873 AcrB/AcrD/AcrF family JNUCC6_05115 PF00005 ABC transporter JNUCC6_05115 PF00664 ABC transporter transmembrane region JNUCC6_05120 PF00005 ABC transporter JNUCC6_05120 PF00664 ABC transporter transmembrane region JNUCC6_05130 PF07690 Major Facilitator Superfamily JNUCC6_05150 PF00885 6,7-dimethyl-8-ribityllumazine synthase JNUCC6_05155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JNUCC6_05155 PF00925 GTP cyclohydrolase II JNUCC6_05160 PF00677 Lumazine binding domain JNUCC6_05165 PF01872 RibD C-terminal domain JNUCC6_05165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNUCC6_05180 PF08281 Sigma-70, region 4 JNUCC6_05180 PF04542 Sigma-70 region 2 JNUCC6_05190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_05190 PF03466 LysR substrate binding domain JNUCC6_05205 PF00005 ABC transporter JNUCC6_05210 PF00072 Response regulator receiver domain JNUCC6_05210 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_05215 PF07730 Histidine kinase JNUCC6_05220 PF10997 Alternate to MurJ JNUCC6_05230 PF12697 Alpha/beta hydrolase family JNUCC6_05240 PF00881 Nitroreductase family JNUCC6_05245 PF01638 HxlR-like helix-turn-helix JNUCC6_05310 PF05504 Spore germination B3/ GerAC like, C-terminal JNUCC6_05340 PF00209 Sodium:neurotransmitter symporter family JNUCC6_05345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_05345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_05355 PF13302 Acetyltransferase (GNAT) domain JNUCC6_05360 PF12833 Helix-turn-helix domain JNUCC6_05360 PF06445 GyrI-like small molecule binding domain JNUCC6_05375 PF09297 NADH pyrophosphatase zinc ribbon domain JNUCC6_05375 PF00293 NUDIX domain JNUCC6_05380 PF03816 Cell envelope-related transcriptional attenuator domain JNUCC6_05385 PF07690 Major Facilitator Superfamily JNUCC6_05405 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_05410 PF00750 tRNA synthetases class I (R) JNUCC6_05410 PF05746 DALR anticodon binding domain JNUCC6_05410 PF03485 Arginyl tRNA synthetase N terminal domain JNUCC6_05420 PF13302 Acetyltransferase (GNAT) domain JNUCC6_05425 PF04229 GrpB protein JNUCC6_05425 PF13673 Acetyltransferase (GNAT) domain JNUCC6_05455 PF08241 Methyltransferase domain JNUCC6_05460 PF03764 Elongation factor G, domain IV JNUCC6_05460 PF14492 Elongation Factor G, domain II JNUCC6_05460 PF00679 Elongation factor G C-terminus JNUCC6_05460 PF00009 Elongation factor Tu GTP binding domain JNUCC6_05470 PF04607 Region found in RelA / SpoT proteins JNUCC6_05480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_05480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_05485 PF01301 Glycosyl hydrolases family 35 JNUCC6_05495 PF00326 Prolyl oligopeptidase family JNUCC6_05495 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JNUCC6_05520 PF00474 Sodium:solute symporter family JNUCC6_05525 PF03547 Membrane transport protein JNUCC6_05530 PF07969 Amidohydrolase family JNUCC6_05535 PF07702 UTRA domain JNUCC6_05535 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_05540 PF07969 Amidohydrolase family JNUCC6_05585 PF00501 AMP-binding enzyme JNUCC6_05585 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_05600 PF00037 4Fe-4S binding domain JNUCC6_05605 PF08741 YwhD family JNUCC6_05640 PF13538 UvrD-like helicase C-terminal domain JNUCC6_05645 PF08241 Methyltransferase domain JNUCC6_05650 PF00583 Acetyltransferase (GNAT) family JNUCC6_05655 PF07486 Cell Wall Hydrolase JNUCC6_05685 PF02403 Seryl-tRNA synthetase N-terminal domain JNUCC6_05685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_05690 PF01174 SNO glutamine amidotransferase family JNUCC6_05705 PF01048 Phosphorylase superfamily JNUCC6_05710 PF07690 Major Facilitator Superfamily JNUCC6_05715 PF07729 FCD domain JNUCC6_05715 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_05720 PF02645 Uncharacterised protein, DegV family COG1307 JNUCC6_05725 PF00474 Sodium:solute symporter family JNUCC6_05735 PF00672 HAMP domain JNUCC6_05735 PF17202 Single cache domain 3 JNUCC6_05735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_05740 PF11188 Protein of unknown function (DUF2975) JNUCC6_05745 PF13443 Cro/C1-type HTH DNA-binding domain JNUCC6_05765 PF01551 Peptidase family M23 JNUCC6_05770 PF07722 Peptidase C26 JNUCC6_05775 PF00005 ABC transporter JNUCC6_05775 PF00664 ABC transporter transmembrane region JNUCC6_05785 PF00107 Zinc-binding dehydrogenase JNUCC6_05785 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_05800 PF01979 Amidohydrolase family JNUCC6_05805 PF17392 Urocanase C-terminal domain JNUCC6_05805 PF01175 Urocanase Rossmann-like domain JNUCC6_05805 PF17391 Urocanase N-terminal domain JNUCC6_05810 PF07670 Nucleoside recognition JNUCC6_05820 PF07687 Peptidase dimerisation domain JNUCC6_05820 PF01546 Peptidase family M20/M25/M40 JNUCC6_05825 PF00221 Aromatic amino acid lyase JNUCC6_05830 PF13726 Na+-H+ antiporter family JNUCC6_05830 PF03553 Na+/H+ antiporter family JNUCC6_05835 PF01546 Peptidase family M20/M25/M40 JNUCC6_05835 PF07687 Peptidase dimerisation domain JNUCC6_05840 PF01979 Amidohydrolase family JNUCC6_05845 PF07670 Nucleoside recognition JNUCC6_05850 PF01175 Urocanase Rossmann-like domain JNUCC6_05850 PF17392 Urocanase C-terminal domain JNUCC6_05850 PF17391 Urocanase N-terminal domain JNUCC6_05855 PF00158 Sigma-54 interaction domain JNUCC6_05855 PF02954 Bacterial regulatory protein, Fis family JNUCC6_05855 PF13426 PAS domain JNUCC6_05870 PF12833 Helix-turn-helix domain JNUCC6_05890 PF12746 GNAT acetyltransferase JNUCC6_05925 PF01230 HIT domain JNUCC6_05930 PF13302 Acetyltransferase (GNAT) domain JNUCC6_05935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JNUCC6_05935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNUCC6_05940 PF00294 pfkB family carbohydrate kinase JNUCC6_05945 PF00455 DeoR C terminal sensor domain JNUCC6_05945 PF08220 DeoR-like helix-turn-helix domain JNUCC6_05950 PF05524 PEP-utilising enzyme, N-terminal JNUCC6_05950 PF00391 PEP-utilising enzyme, mobile domain JNUCC6_05950 PF02896 PEP-utilising enzyme, TIM barrel domain JNUCC6_05955 PF00381 PTS HPr component phosphorylation site JNUCC6_05965 PF00245 Alkaline phosphatase JNUCC6_05970 PF11611 Domain of unknown function (DUF4352) JNUCC6_05970 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JNUCC6_05990 PF13344 Haloacid dehalogenase-like hydrolase JNUCC6_05990 PF00293 NUDIX domain JNUCC6_06025 PF13302 Acetyltransferase (GNAT) domain JNUCC6_06040 PF12833 Helix-turn-helix domain JNUCC6_06055 PF17770 Ribonuclease J C-terminal domain JNUCC6_06055 PF00753 Metallo-beta-lactamase superfamily JNUCC6_06055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNUCC6_06060 PF01209 ubiE/COQ5 methyltransferase family JNUCC6_06070 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_06070 PF17874 MalT-like TPR region JNUCC6_06070 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_06070 PF17874 MalT-like TPR region JNUCC6_06090 PF00144 Beta-lactamase JNUCC6_06100 PF00005 ABC transporter JNUCC6_06105 PF02687 FtsX-like permease family JNUCC6_06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_06115 PF00072 Response regulator receiver domain JNUCC6_06115 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_06155 PF03641 Possible lysine decarboxylase JNUCC6_06160 PF13847 Methyltransferase domain JNUCC6_06165 PF01758 Sodium Bile acid symporter family JNUCC6_06170 PF01022 Bacterial regulatory protein, arsR family JNUCC6_06175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JNUCC6_06180 PF00874 PRD domain JNUCC6_06180 PF03123 CAT RNA binding domain JNUCC6_06185 PF00367 phosphotransferase system, EIIB JNUCC6_06185 PF02378 Phosphotransferase system, EIIC JNUCC6_06210 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_06215 PF04854 Protein of unknown function, DUF624 JNUCC6_06220 PF02811 PHP domain JNUCC6_06225 PF01554 MatE JNUCC6_06230 PF00149 Calcineurin-like phosphoesterase JNUCC6_06235 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_06245 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_06255 PF17912 MalK OB fold domain JNUCC6_06255 PF03459 TOBE domain JNUCC6_06255 PF00005 ABC transporter JNUCC6_06260 PF08220 DeoR-like helix-turn-helix domain JNUCC6_06260 PF00455 DeoR C terminal sensor domain JNUCC6_06295 PF03737 Aldolase/RraA JNUCC6_06305 PF03793 PASTA domain JNUCC6_06305 PF00069 Protein kinase domain JNUCC6_06320 PF05163 DinB family JNUCC6_06330 PF01425 Amidase JNUCC6_06335 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_06340 PF02082 Transcriptional regulator JNUCC6_06350 PF13393 Histidyl-tRNA synthetase JNUCC6_06350 PF03129 Anticodon binding domain JNUCC6_06355 PF13302 Acetyltransferase (GNAT) domain JNUCC6_06360 PF00578 AhpC/TSA family JNUCC6_06380 PF04229 GrpB protein JNUCC6_06410 PF08281 Sigma-70, region 4 JNUCC6_06410 PF04542 Sigma-70 region 2 JNUCC6_06415 PF11738 Protein of unknown function (DUF3298) JNUCC6_06415 PF13739 Deacetylase PdaC JNUCC6_06425 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_06430 PF01545 Cation efflux family JNUCC6_06430 PF16916 Dimerisation domain of Zinc Transporter JNUCC6_06505 PF00239 Resolvase, N terminal domain JNUCC6_06505 PF13408 Recombinase zinc beta ribbon domain JNUCC6_06505 PF07508 Recombinase JNUCC6_06530 PF02445 Quinolinate synthetase A protein JNUCC6_06535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JNUCC6_06535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JNUCC6_06540 PF02910 Fumarate reductase flavoprotein C-term JNUCC6_06540 PF00890 FAD binding domain JNUCC6_06545 PF00266 Aminotransferase class-V JNUCC6_06550 PF08279 HTH domain JNUCC6_06550 PF02829 3H domain JNUCC6_06555 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_06560 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_06560 PF00072 Response regulator receiver domain JNUCC6_06565 PF04235 Protein of unknown function (DUF418) JNUCC6_06580 PF01810 LysE type translocator JNUCC6_06595 PF07690 Major Facilitator Superfamily JNUCC6_06605 PF14158 YndJ-like protein JNUCC6_06620 PF13302 Acetyltransferase (GNAT) domain JNUCC6_06635 PF00293 NUDIX domain JNUCC6_06645 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_06675 PF00535 Glycosyl transferase family 2 JNUCC6_06675 PF13181 Tetratricopeptide repeat JNUCC6_06680 PF01047 MarR family JNUCC6_06685 PF01554 MatE JNUCC6_06690 PF13344 Haloacid dehalogenase-like hydrolase JNUCC6_06690 PF00293 NUDIX domain JNUCC6_06710 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_06710 PF00672 HAMP domain JNUCC6_06715 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_06715 PF00072 Response regulator receiver domain JNUCC6_06720 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_06720 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_06725 PF00571 CBS domain JNUCC6_06725 PF03471 Transporter associated domain JNUCC6_06725 PF01595 Cyclin M transmembrane N-terminal domain JNUCC6_06730 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_06735 PF00571 CBS domain JNUCC6_06735 PF00005 ABC transporter JNUCC6_06740 PF03466 LysR substrate binding domain JNUCC6_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_06745 PF03358 NADPH-dependent FMN reductase JNUCC6_06750 PF01497 Periplasmic binding protein JNUCC6_06755 PF01032 FecCD transport family JNUCC6_06760 PF01032 FecCD transport family JNUCC6_06765 PF00005 ABC transporter JNUCC6_06770 PF01636 Phosphotransferase enzyme family JNUCC6_06780 PF14748 Pyrroline-5-carboxylate reductase dimerisation JNUCC6_06780 PF03807 NADP oxidoreductase coenzyme F420-dependent JNUCC6_06785 PF07859 alpha/beta hydrolase fold JNUCC6_06790 PF00324 Amino acid permease JNUCC6_06805 PF13280 WYL domain JNUCC6_06805 PF08279 HTH domain JNUCC6_06810 PF01040 UbiA prenyltransferase family JNUCC6_06825 PF08281 Sigma-70, region 4 JNUCC6_06825 PF04542 Sigma-70 region 2 JNUCC6_06830 PF00753 Metallo-beta-lactamase superfamily JNUCC6_06830 PF03772 Competence protein JNUCC6_06830 PF13567 Domain of unknown function (DUF4131) JNUCC6_06850 PF13508 Acetyltransferase (GNAT) domain JNUCC6_06850 PF00583 Acetyltransferase (GNAT) family JNUCC6_06855 PF13619 KTSC domain JNUCC6_06855 PF00152 tRNA synthetases class II (D, K and N) JNUCC6_06855 PF01336 OB-fold nucleic acid binding domain JNUCC6_06875 PF01522 Polysaccharide deacetylase JNUCC6_06880 PF13456 Reverse transcriptase-like JNUCC6_06885 PF01541 GIY-YIG catalytic domain JNUCC6_06890 PF07977 FabA-like domain JNUCC6_06895 PF00583 Acetyltransferase (GNAT) family JNUCC6_06910 PF00664 ABC transporter transmembrane region JNUCC6_06910 PF00005 ABC transporter JNUCC6_06915 PF00005 ABC transporter JNUCC6_06915 PF00664 ABC transporter transmembrane region JNUCC6_06920 PF08264 Anticodon-binding domain of tRNA JNUCC6_06920 PF09334 tRNA synthetases class I (M) JNUCC6_06930 PF00313 'Cold-shock' DNA-binding domain JNUCC6_06945 PF12848 ABC transporter JNUCC6_06945 PF00005 ABC transporter JNUCC6_06970 PF00005 ABC transporter JNUCC6_06995 PF03023 Lipid II flippase MurJ JNUCC6_07005 PF13439 Glycosyltransferase Family 4 JNUCC6_07005 PF00534 Glycosyl transferases group 1 JNUCC6_07010 PF13614 AAA domain JNUCC6_07015 PF13807 G-rich domain on putative tyrosine kinase JNUCC6_07015 PF02706 Chain length determinant protein JNUCC6_07025 PF00005 ABC transporter JNUCC6_07025 PF00664 ABC transporter transmembrane region JNUCC6_07040 PF01925 Sulfite exporter TauE/SafE JNUCC6_07045 PF01206 Sulfurtransferase TusA JNUCC6_07050 PF00753 Metallo-beta-lactamase superfamily JNUCC6_07050 PF00581 Rhodanese-like domain JNUCC6_07055 PF01206 Sulfurtransferase TusA JNUCC6_07055 PF00581 Rhodanese-like domain JNUCC6_07060 PF13686 DsrE/DsrF/DrsH-like family JNUCC6_07065 PF08892 YqcI/YcgG family JNUCC6_07070 PF00324 Amino acid permease JNUCC6_07085 PF08031 Berberine and berberine like JNUCC6_07085 PF01565 FAD binding domain JNUCC6_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_07110 PF03466 LysR substrate binding domain JNUCC6_07120 PF05163 DinB family JNUCC6_07130 PF11079 Bacterial protein YqhG of unknown function JNUCC6_07135 PF00176 SNF2 family N-terminal domain JNUCC6_07135 PF00271 Helicase conserved C-terminal domain JNUCC6_07145 PF03845 Spore germination protein JNUCC6_07150 PF03323 Bacillus/Clostridium GerA spore germination protein JNUCC6_07170 PF12867 DinB superfamily JNUCC6_07200 PF03992 Antibiotic biosynthesis monooxygenase JNUCC6_07225 PF12706 Beta-lactamase superfamily domain JNUCC6_07225 PF00753 Metallo-beta-lactamase superfamily JNUCC6_07235 PF11799 impB/mucB/samB family C-terminal domain JNUCC6_07235 PF00817 impB/mucB/samB family JNUCC6_07235 PF11798 IMS family HHH motif JNUCC6_07245 PF01584 CheW-like domain JNUCC6_07250 PF01546 Peptidase family M20/M25/M40 JNUCC6_07250 PF07687 Peptidase dimerisation domain JNUCC6_07260 PF01039 Carboxyl transferase domain JNUCC6_07275 PF11728 Putative aromatic acid exporter C-terminal domain JNUCC6_07275 PF06081 Aromatic acid exporter family member 1 JNUCC6_07280 PF06491 Disulphide isomerase JNUCC6_07295 PF02310 B12 binding domain JNUCC6_07295 PF01642 Methylmalonyl-CoA mutase JNUCC6_07300 PF01642 Methylmalonyl-CoA mutase JNUCC6_07305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNUCC6_07305 PF00364 Biotin-requiring enzyme JNUCC6_07305 PF02817 e3 binding domain JNUCC6_07310 PF02779 Transketolase, pyrimidine binding domain JNUCC6_07310 PF02780 Transketolase, C-terminal domain JNUCC6_07315 PF00676 Dehydrogenase E1 component JNUCC6_07320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNUCC6_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_07325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNUCC6_07325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNUCC6_07330 PF02954 Bacterial regulatory protein, Fis family JNUCC6_07330 PF00158 Sigma-54 interaction domain JNUCC6_07330 PF00989 PAS fold JNUCC6_07340 PF03009 Glycerophosphoryl diester phosphodiesterase family JNUCC6_07350 PF08769 Sporulation initiation factor Spo0A C terminal JNUCC6_07350 PF00072 Response regulator receiver domain JNUCC6_07355 PF05580 SpoIVB peptidase S55 JNUCC6_07355 PF17820 PDZ domain JNUCC6_07360 PF13476 AAA domain JNUCC6_07365 PF02863 Arginine repressor, C-terminal domain JNUCC6_07365 PF01316 Arginine repressor, DNA binding domain JNUCC6_07370 PF01479 S4 domain JNUCC6_07370 PF01728 FtsJ-like methyltransferase JNUCC6_07375 PF02779 Transketolase, pyrimidine binding domain JNUCC6_07375 PF02780 Transketolase, C-terminal domain JNUCC6_07375 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JNUCC6_07380 PF00348 Polyprenyl synthetase JNUCC6_07385 PF02609 Exonuclease VII small subunit JNUCC6_07390 PF02601 Exonuclease VII, large subunit JNUCC6_07390 PF13742 OB-fold nucleic acid binding domain JNUCC6_07395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JNUCC6_07395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JNUCC6_07400 PF01029 NusB family JNUCC6_07415 PF07690 Major Facilitator Superfamily JNUCC6_07425 PF00578 AhpC/TSA family JNUCC6_07430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_07430 PF13192 Thioredoxin domain JNUCC6_07440 PF07969 Amidohydrolase family JNUCC6_07455 PF00293 NUDIX domain JNUCC6_07500 PF01906 Putative heavy-metal-binding JNUCC6_07505 PF16123 Hydroxyacylglutathione hydrolase C-terminus JNUCC6_07505 PF00753 Metallo-beta-lactamase superfamily JNUCC6_07510 PF08279 HTH domain JNUCC6_07510 PF13280 WYL domain JNUCC6_07515 PF01965 DJ-1/PfpI family JNUCC6_07560 PF00144 Beta-lactamase JNUCC6_07600 PF10898 Protein of unknown function (DUF2716) JNUCC6_07610 PF01061 ABC-2 type transporter JNUCC6_07615 PF13732 Domain of unknown function (DUF4162) JNUCC6_07615 PF00005 ABC transporter JNUCC6_07645 PF05191 Adenylate kinase, active site lid JNUCC6_07655 PF01381 Helix-turn-helix JNUCC6_07680 PF08281 Sigma-70, region 4 JNUCC6_07680 PF04542 Sigma-70 region 2 JNUCC6_07695 PF00583 Acetyltransferase (GNAT) family JNUCC6_07720 PF01638 HxlR-like helix-turn-helix JNUCC6_07730 PF00106 short chain dehydrogenase JNUCC6_07735 PF16123 Hydroxyacylglutathione hydrolase C-terminus JNUCC6_07735 PF00753 Metallo-beta-lactamase superfamily JNUCC6_07750 PF01047 MarR family JNUCC6_07760 PF02525 Flavodoxin-like fold JNUCC6_07765 PF16403 Domain of unknown function (DUF5011) JNUCC6_07770 PF03780 Asp23 family, cell envelope-related function JNUCC6_07775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNUCC6_07775 PF00289 Biotin carboxylase, N-terminal domain JNUCC6_07775 PF02785 Biotin carboxylase C-terminal domain JNUCC6_07780 PF00364 Biotin-requiring enzyme JNUCC6_07810 PF08207 Elongation factor P (EF-P) KOW-like domain JNUCC6_07810 PF01132 Elongation factor P (EF-P) OB domain JNUCC6_07810 PF09285 Elongation factor P, C-terminal JNUCC6_07815 PF01321 Creatinase/Prolidase N-terminal domain JNUCC6_07815 PF00557 Metallopeptidase family M24 JNUCC6_07820 PF01220 Dehydroquinase class II JNUCC6_07830 PF07136 Protein of unknown function (DUF1385) JNUCC6_07845 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_07850 PF00317 Ribonucleotide reductase, all-alpha domain JNUCC6_07850 PF02867 Ribonucleotide reductase, barrel domain JNUCC6_07850 PF03477 ATP cone domain JNUCC6_07855 PF03099 Biotin/lipoate A/B protein ligase family JNUCC6_07860 PF00581 Rhodanese-like domain JNUCC6_07865 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_07880 PF02347 Glycine cleavage system P-protein JNUCC6_07885 PF02347 Glycine cleavage system P-protein JNUCC6_07890 PF08669 Glycine cleavage T-protein C-terminal barrel domain JNUCC6_07890 PF01571 Aminomethyltransferase folate-binding domain JNUCC6_07895 PF01202 Shikimate kinase JNUCC6_07915 PF07963 Prokaryotic N-terminal methylation motif JNUCC6_07920 PF00482 Type II secretion system (T2SS), protein F JNUCC6_07925 PF00437 Type II/IV secretion system protein JNUCC6_07935 PF11117 Protein of unknown function (DUF2626) JNUCC6_07950 PF00753 Metallo-beta-lactamase superfamily JNUCC6_07965 PF00884 Sulfatase JNUCC6_07975 PF01812 5-formyltetrahydrofolate cyclo-ligase family JNUCC6_07980 PF00471 Ribosomal protein L33 JNUCC6_07995 PF01895 PhoU domain JNUCC6_08000 PF00005 ABC transporter JNUCC6_08005 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_08010 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_08015 PF12849 PBP superfamily domain JNUCC6_08020 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_08020 PF03717 Penicillin-binding Protein dimerisation domain JNUCC6_08025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JNUCC6_08025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JNUCC6_08030 PF04306 Protein of unknown function (DUF456) JNUCC6_08035 PF02690 Na+/Pi-cotransporter JNUCC6_08050 PF04551 GcpE protein JNUCC6_08055 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JNUCC6_08065 PF01098 Cell cycle protein JNUCC6_08070 PF05816 Toxic anion resistance protein (TelA) JNUCC6_08075 PF14266 Putative component of 'biosynthetic module' JNUCC6_08100 PF03741 Integral membrane protein TerC family JNUCC6_08105 PF02342 TerD domain JNUCC6_08110 PF02342 TerD domain JNUCC6_08115 PF02342 TerD domain JNUCC6_08125 PF01978 Sugar-specific transcriptional regulator TrmB JNUCC6_08125 PF11495 Archaeal transcriptional regulator TrmB JNUCC6_08130 PF01925 Sulfite exporter TauE/SafE JNUCC6_08135 PF17922 Tetracyclin repressor-like, C-terminal domain JNUCC6_08135 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_08140 PF07690 Major Facilitator Superfamily JNUCC6_08150 PF05901 Excalibur calcium-binding domain JNUCC6_08155 PF01475 Ferric uptake regulator family JNUCC6_08160 PF00950 ABC 3 transport family JNUCC6_08165 PF00005 ABC transporter JNUCC6_08175 PF01261 Xylose isomerase-like TIM barrel JNUCC6_08180 PF00270 DEAD/DEAH box helicase JNUCC6_08180 PF00271 Helicase conserved C-terminal domain JNUCC6_08190 PF02401 LytB protein JNUCC6_08195 PF01784 NIF3 (NGG1p interacting factor 3) JNUCC6_08200 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JNUCC6_08205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNUCC6_08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_08210 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_08220 PF00140 Sigma-70 factor, region 1.2 JNUCC6_08220 PF04542 Sigma-70 region 2 JNUCC6_08220 PF04539 Sigma-70 region 3 JNUCC6_08220 PF04545 Sigma-70, region 4 JNUCC6_08220 PF03979 Sigma-70 factor, region 1.1 JNUCC6_08225 PF10410 DnaB-helicase binding domain of primase JNUCC6_08225 PF01807 CHC2 zinc finger JNUCC6_08225 PF08275 DNA primase catalytic core, N-terminal domain JNUCC6_08230 PF03618 Kinase/pyrophosphorylase JNUCC6_08235 PF08279 HTH domain JNUCC6_08235 PF00571 CBS domain JNUCC6_08240 PF03129 Anticodon binding domain JNUCC6_08240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_08245 PF02565 Recombination protein O C terminal JNUCC6_08245 PF11967 Recombination protein O N terminal JNUCC6_08250 PF01926 50S ribosome-binding GTPase JNUCC6_08250 PF07650 KH domain JNUCC6_08255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNUCC6_08260 PF01219 Prokaryotic diacylglycerol kinase JNUCC6_08265 PF02130 Uncharacterized protein family UPF0054 JNUCC6_08270 PF07698 7TM receptor with intracellular HD hydrolase JNUCC6_08270 PF01966 HD domain JNUCC6_08270 PF07697 7TM-HD extracellular JNUCC6_08275 PF02562 PhoH-like protein JNUCC6_08295 PF12127 SigmaW regulon antibacterial JNUCC6_08300 PF01972 Serine dehydrogenase proteinase JNUCC6_08300 PF01957 NfeD-like C-terminal, partner-binding JNUCC6_08305 PF03109 ABC1 family JNUCC6_08310 PF00596 Class II Aldolase and Adducin N-terminal domain JNUCC6_08315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNUCC6_08315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNUCC6_08320 PF02952 L-fucose isomerase, C-terminal domain JNUCC6_08320 PF07881 L-fucose isomerase, first N-terminal domain JNUCC6_08320 PF07882 L-fucose isomerase, second N-terminal domain JNUCC6_08325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNUCC6_08325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNUCC6_08330 PF00596 Class II Aldolase and Adducin N-terminal domain JNUCC6_08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JNUCC6_08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JNUCC6_08345 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_08350 PF00005 ABC transporter JNUCC6_08355 PF08220 DeoR-like helix-turn-helix domain JNUCC6_08355 PF00455 DeoR C terminal sensor domain JNUCC6_08360 PF05025 RbsD / FucU transport protein family JNUCC6_08365 PF01165 Ribosomal protein S21 JNUCC6_08370 PF01791 DeoC/LacD family aldolase JNUCC6_08380 PF01938 TRAM domain JNUCC6_08380 PF04055 Radical SAM superfamily JNUCC6_08380 PF00919 Uncharacterized protein family UPF0004 JNUCC6_08385 PF04452 RNA methyltransferase JNUCC6_08395 PF00226 DnaJ domain JNUCC6_08395 PF00684 DnaJ central domain JNUCC6_08395 PF01556 DnaJ C terminal domain JNUCC6_08400 PF00012 Hsp70 protein JNUCC6_08405 PF01025 GrpE JNUCC6_08410 PF01628 HrcA protein C terminal domain JNUCC6_08415 PF04055 Radical SAM superfamily JNUCC6_08415 PF06969 HemN C-terminal domain JNUCC6_08420 PF06421 GTP-binding protein LepA C-terminus JNUCC6_08420 PF03144 Elongation factor Tu domain 2 JNUCC6_08420 PF00679 Elongation factor G C-terminus JNUCC6_08420 PF00009 Elongation factor Tu GTP binding domain JNUCC6_08430 PF03418 Germination protease JNUCC6_08435 PF01649 Ribosomal protein S20 JNUCC6_08445 PF06144 DNA polymerase III, delta subunit JNUCC6_08450 PF14141 YqzM-like protein JNUCC6_08455 PF03772 Competence protein JNUCC6_08455 PF13567 Domain of unknown function (DUF4131) JNUCC6_08455 PF00753 Metallo-beta-lactamase superfamily JNUCC6_08460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JNUCC6_08465 PF10531 SLBB domain JNUCC6_08470 PF13649 Methyltransferase domain JNUCC6_08480 PF01966 HD domain JNUCC6_08485 PF01467 Cytidylyltransferase-like JNUCC6_08490 PF01985 CRS1 / YhbY (CRM) domain JNUCC6_08495 PF01488 Shikimate / quinate 5-dehydrogenase JNUCC6_08495 PF08501 Shikimate dehydrogenase substrate binding domain JNUCC6_08495 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JNUCC6_08500 PF01926 50S ribosome-binding GTPase JNUCC6_08510 PF02666 Phosphatidylserine decarboxylase JNUCC6_08520 PF04542 Sigma-70 region 2 JNUCC6_08520 PF04545 Sigma-70, region 4 JNUCC6_08525 PF01048 Phosphorylase superfamily JNUCC6_08535 PF01272 Transcription elongation factor, GreA/GreB, C-term JNUCC6_08535 PF03449 Transcription elongation factor, N-terminal JNUCC6_08540 PF00485 Phosphoribulokinase / Uridine kinase family JNUCC6_08545 PF16325 Peptidase family U32 C-terminal domain JNUCC6_08545 PF01136 Peptidase family U32 JNUCC6_08550 PF01136 Peptidase family U32 JNUCC6_08555 PF01596 O-methyltransferase JNUCC6_08560 PF02618 YceG-like family JNUCC6_08565 PF06949 Protein of unknown function (DUF1292) JNUCC6_08570 PF06949 Protein of unknown function (DUF1292) JNUCC6_08575 PF03652 Holliday junction resolvase JNUCC6_08580 PF06135 IreB regulatory phosphoprotein JNUCC6_08585 PF01411 tRNA synthetases class II (A) JNUCC6_08585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNUCC6_08590 PF13538 UvrD-like helicase C-terminal domain JNUCC6_08590 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JNUCC6_08590 PF14490 Helix-hairpin-helix containing domain JNUCC6_08595 PF07719 Tetratricopeptide repeat JNUCC6_08595 PF13181 Tetratricopeptide repeat JNUCC6_08605 PF00266 Aminotransferase class-V JNUCC6_08610 PF02082 Transcriptional regulator JNUCC6_08615 PF05496 Holliday junction DNA helicase RuvB P-loop domain JNUCC6_08615 PF16193 AAA C-terminal domain JNUCC6_08615 PF12002 MgsA AAA+ ATPase C terminal JNUCC6_08630 PF00005 ABC transporter JNUCC6_08630 PF13732 Domain of unknown function (DUF4162) JNUCC6_08645 PF00899 ThiF family JNUCC6_08650 PF01869 BadF/BadG/BcrA/BcrD ATPase family JNUCC6_08660 PF02378 Phosphotransferase system, EIIC JNUCC6_08665 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JNUCC6_08670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JNUCC6_08680 PF00391 PEP-utilising enzyme, mobile domain JNUCC6_08680 PF02896 PEP-utilising enzyme, TIM barrel domain JNUCC6_08680 PF05524 PEP-utilising enzyme, N-terminal JNUCC6_08685 PF00381 PTS HPr component phosphorylation site JNUCC6_08690 PF13580 SIS domain JNUCC6_08695 PF07702 UTRA domain JNUCC6_08695 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_08700 PF01979 Amidohydrolase family JNUCC6_08705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JNUCC6_08715 PF01336 OB-fold nucleic acid binding domain JNUCC6_08715 PF00152 tRNA synthetases class II (D, K and N) JNUCC6_08715 PF02938 GAD domain JNUCC6_08720 PF03129 Anticodon binding domain JNUCC6_08720 PF13393 Histidyl-tRNA synthetase JNUCC6_08725 PF01520 N-acetylmuramoyl-L-alanine amidase JNUCC6_08730 PF02580 D-Tyr-tRNA(Tyr) deacylase JNUCC6_08735 PF13291 ACT domain JNUCC6_08735 PF02824 TGS domain JNUCC6_08735 PF04607 Region found in RelA / SpoT proteins JNUCC6_08740 PF00156 Phosphoribosyl transferase domain JNUCC6_08745 PF17768 RecJ OB domain JNUCC6_08745 PF02272 DHHA1 domain JNUCC6_08745 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JNUCC6_08745 PF01368 DHH family JNUCC6_08750 PF02355 Protein export membrane protein JNUCC6_08750 PF07549 SecD/SecF GG Motif JNUCC6_08765 PF04239 Protein of unknown function (DUF421) JNUCC6_08770 PF02699 Preprotein translocase subunit JNUCC6_08775 PF01702 Queuine tRNA-ribosyltransferase JNUCC6_08780 PF02547 Queuosine biosynthesis protein JNUCC6_08785 PF17864 RuvB AAA lid domain JNUCC6_08785 PF05491 RuvB C-terminal winged helix domain JNUCC6_08785 PF05496 Holliday junction DNA helicase RuvB P-loop domain JNUCC6_08790 PF01330 RuvA N terminal domain JNUCC6_08790 PF07499 RuvA, C-terminal domain JNUCC6_08805 PF08279 HTH domain JNUCC6_08805 PF02829 3H domain JNUCC6_08810 PF00800 Prephenate dehydratase JNUCC6_08810 PF01842 ACT domain JNUCC6_08820 PF09269 Domain of unknown function (DUF1967) JNUCC6_08820 PF01018 GTP1/OBG JNUCC6_08820 PF01926 50S ribosome-binding GTPase JNUCC6_08830 PF01016 Ribosomal L27 protein JNUCC6_08840 PF00829 Ribosomal prokaryotic L21 protein JNUCC6_08845 PF02163 Peptidase family M50 JNUCC6_08855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JNUCC6_08860 PF03775 Septum formation inhibitor MinC, C-terminal domain JNUCC6_08865 PF04093 rod shape-determining protein MreD JNUCC6_08870 PF04085 rod shape-determining protein MreC JNUCC6_08880 PF04002 RadC-like JAB domain JNUCC6_08895 PF01478 Type IV leader peptidase family JNUCC6_08895 PF06750 Bacterial Peptidase A24 N-terminal domain JNUCC6_08920 PF00482 Type II secretion system (T2SS), protein F JNUCC6_08925 PF00437 Type II/IV secretion system protein JNUCC6_08930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JNUCC6_08930 PF00437 Type II/IV secretion system protein JNUCC6_08960 PF00072 Response regulator receiver domain JNUCC6_08960 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_08965 PF08245 Mur ligase middle domain JNUCC6_08965 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_08970 PF08245 Mur ligase middle domain JNUCC6_08970 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_08975 PF00133 tRNA synthetases class I (I, L, M and V) JNUCC6_08975 PF08264 Anticodon-binding domain of tRNA JNUCC6_08975 PF10458 Valyl tRNA synthetase tRNA binding arm JNUCC6_08985 PF00202 Aminotransferase class-III JNUCC6_08990 PF00490 Delta-aminolevulinic acid dehydratase JNUCC6_09000 PF03900 Porphobilinogen deaminase, C-terminal domain JNUCC6_09000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JNUCC6_09005 PF01578 Cytochrome C assembly protein JNUCC6_09010 PF01488 Shikimate / quinate 5-dehydrogenase JNUCC6_09010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JNUCC6_09010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JNUCC6_09015 PF01926 50S ribosome-binding GTPase JNUCC6_09020 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_09020 PF02190 ATP-dependent protease La (LON) substrate-binding domain JNUCC6_09020 PF05362 Lon protease (S16) C-terminal proteolytic domain JNUCC6_09025 PF06689 ClpX C4-type zinc finger JNUCC6_09025 PF10431 C-terminal, D2-small domain, of ClpB protein JNUCC6_09025 PF07724 AAA domain (Cdc48 subfamily) JNUCC6_09030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JNUCC6_09030 PF05698 Bacterial trigger factor protein (TF) C-terminus JNUCC6_09030 PF05697 Bacterial trigger factor protein (TF) JNUCC6_09040 PF03466 LysR substrate binding domain JNUCC6_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_09045 PF00491 Arginase family JNUCC6_09050 PF03616 Sodium/glutamate symporter JNUCC6_09060 PF18011 C-terminal domain found in long catalases JNUCC6_09060 PF06628 Catalase-related immune-responsive JNUCC6_09060 PF00199 Catalase JNUCC6_09065 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JNUCC6_09070 PF00535 Glycosyl transferase family 2 JNUCC6_09080 PF01520 N-acetylmuramoyl-L-alanine amidase JNUCC6_09080 PF05036 Sporulation related domain JNUCC6_09110 PF12833 Helix-turn-helix domain JNUCC6_09110 PF00072 Response regulator receiver domain JNUCC6_09115 PF00672 HAMP domain JNUCC6_09115 PF02743 Cache domain JNUCC6_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_09115 PF06580 Histidine kinase JNUCC6_09120 PF13407 Periplasmic binding protein domain JNUCC6_09125 PF12833 Helix-turn-helix domain JNUCC6_09135 PF06134 L-rhamnose isomerase (RhaA) JNUCC6_09140 PF05336 L-rhamnose mutarotase JNUCC6_09145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNUCC6_09145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNUCC6_09150 PF13407 Periplasmic binding protein domain JNUCC6_09155 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_09160 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_09165 PF00005 ABC transporter JNUCC6_09170 PF01432 Peptidase family M3 JNUCC6_09170 PF08439 Oligopeptidase F JNUCC6_09175 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_09180 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09180 PF00501 AMP-binding enzyme JNUCC6_09185 PF00501 AMP-binding enzyme JNUCC6_09185 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09190 PF00474 Sodium:solute symporter family JNUCC6_09200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNUCC6_09200 PF02785 Biotin carboxylase C-terminal domain JNUCC6_09200 PF00289 Biotin carboxylase, N-terminal domain JNUCC6_09205 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09205 PF00501 AMP-binding enzyme JNUCC6_09220 PF00501 AMP-binding enzyme JNUCC6_09220 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09225 PF00501 AMP-binding enzyme JNUCC6_09225 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_09230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_09230 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_09235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_09235 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_09235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_09240 PF02436 Conserved carboxylase domain JNUCC6_09240 PF00682 HMGL-like JNUCC6_09240 PF00364 Biotin-requiring enzyme JNUCC6_09245 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_09250 PF01039 Carboxyl transferase domain JNUCC6_09265 PF07662 Na+ dependent nucleoside transporter C-terminus JNUCC6_09265 PF01773 Na+ dependent nucleoside transporter N-terminus JNUCC6_09270 PF01226 Formate/nitrite transporter JNUCC6_09275 PF00313 'Cold-shock' DNA-binding domain JNUCC6_09290 PF01547 Bacterial extracellular solute-binding protein JNUCC6_09295 PF13229 Right handed beta helix region JNUCC6_09300 PF13378 Enolase C-terminal domain-like JNUCC6_09300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNUCC6_09305 PF01081 KDPG and KHG aldolase JNUCC6_09310 PF00294 pfkB family carbohydrate kinase JNUCC6_09315 PF08450 SMP-30/Gluconolactonase/LRE-like region JNUCC6_09325 PF00480 ROK family JNUCC6_09325 PF01325 Iron dependent repressor, N-terminal DNA binding domain JNUCC6_09340 PF12850 Calcineurin-like phosphoesterase superfamily domain JNUCC6_09345 PF01725 Ham1 family JNUCC6_09350 PF03725 3' exoribonuclease family, domain 2 JNUCC6_09350 PF01138 3' exoribonuclease family, domain 1 JNUCC6_09355 PF01177 Asp/Glu/Hydantoin racemase JNUCC6_09360 PF01047 MarR family JNUCC6_09365 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_09370 PF03061 Thioesterase superfamily JNUCC6_09375 PF13085 2Fe-2S iron-sulfur cluster binding domain JNUCC6_09375 PF13183 4Fe-4S dicluster domain JNUCC6_09380 PF02910 Fumarate reductase flavoprotein C-term JNUCC6_09380 PF00890 FAD binding domain JNUCC6_09385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JNUCC6_09395 PF13840 ACT domain JNUCC6_09395 PF00696 Amino acid kinase family JNUCC6_09400 PF01541 GIY-YIG catalytic domain JNUCC6_09400 PF02151 UvrB/uvrC motif JNUCC6_09400 PF08459 UvrC Helix-hairpin-helix N-terminal JNUCC6_09405 PF00085 Thioredoxin JNUCC6_09410 PF01012 Electron transfer flavoprotein domain JNUCC6_09410 PF00766 Electron transfer flavoprotein FAD-binding domain JNUCC6_09415 PF01012 Electron transfer flavoprotein domain JNUCC6_09420 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_09425 PF08359 YsiA-like protein, C-terminal region JNUCC6_09425 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_09430 PF00501 AMP-binding enzyme JNUCC6_09430 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09440 PF03994 Domain of Unknown Function (DUF350) JNUCC6_09445 PF01713 Smr domain JNUCC6_09445 PF00488 MutS domain V JNUCC6_09450 PF14791 DNA polymerase beta thumb JNUCC6_09450 PF02811 PHP domain JNUCC6_09450 PF14716 Helix-hairpin-helix domain JNUCC6_09460 PF05164 Cell division protein ZapA JNUCC6_09465 PF01351 Ribonuclease HII JNUCC6_09465 PF11858 Domain of unknown function (DUF3378) JNUCC6_09470 PF12679 ABC-2 family transporter protein JNUCC6_09475 PF00005 ABC transporter JNUCC6_09475 PF13732 Domain of unknown function (DUF4162) JNUCC6_09480 PF13396 Phospholipase_D-nuclease N-terminal JNUCC6_09485 PF03147 Ferredoxin-fold anticodon binding domain JNUCC6_09485 PF03483 B3/4 domain JNUCC6_09485 PF01588 Putative tRNA binding domain JNUCC6_09485 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JNUCC6_09485 PF03484 tRNA synthetase B5 domain JNUCC6_09490 PF01409 tRNA synthetases class II core domain (F) JNUCC6_09490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JNUCC6_09495 PF00588 SpoU rRNA Methylase family JNUCC6_09495 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNUCC6_09500 PF00107 Zinc-binding dehydrogenase JNUCC6_09500 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_09505 PF14098 Small, acid-soluble spore protein I JNUCC6_09510 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JNUCC6_09510 PF00877 NlpC/P60 family JNUCC6_09515 PF02913 FAD linked oxidases, C-terminal domain JNUCC6_09515 PF01565 FAD binding domain JNUCC6_09520 PF01758 Sodium Bile acid symporter family JNUCC6_09530 PF00672 HAMP domain JNUCC6_09530 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_09535 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_09535 PF00072 Response regulator receiver domain JNUCC6_09540 PF00149 Calcineurin-like phosphoesterase JNUCC6_09540 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNUCC6_09545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNUCC6_09545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNUCC6_09550 PF05343 M42 glutamyl aminopeptidase JNUCC6_09580 PF00970 Oxidoreductase FAD-binding domain JNUCC6_09580 PF00042 Globin JNUCC6_09580 PF00175 Oxidoreductase NAD-binding domain JNUCC6_09585 PF02082 Transcriptional regulator JNUCC6_09590 PF00453 Ribosomal protein L20 JNUCC6_09595 PF01632 Ribosomal protein L35 JNUCC6_09600 PF05198 Translation initiation factor IF-3, N-terminal domain JNUCC6_09600 PF00707 Translation initiation factor IF-3, C-terminal domain JNUCC6_09605 PF00465 Iron-containing alcohol dehydrogenase JNUCC6_09610 PF03129 Anticodon binding domain JNUCC6_09610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_09610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNUCC6_09610 PF02824 TGS domain JNUCC6_09615 PF01695 IstB-like ATP binding protein JNUCC6_09615 PF07319 Primosomal protein DnaI N-terminus JNUCC6_09620 PF07261 Replication initiation and membrane attachment JNUCC6_09625 PF03477 ATP cone domain JNUCC6_09630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNUCC6_09630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNUCC6_09635 PF01121 Dephospho-CoA kinase JNUCC6_09640 PF06827 Zinc finger found in FPG and IleRS JNUCC6_09640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JNUCC6_09640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JNUCC6_09645 PF00476 DNA polymerase family A JNUCC6_09645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNUCC6_09645 PF01367 5'-3' exonuclease, C-terminal SAM fold JNUCC6_09650 PF00989 PAS fold JNUCC6_09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_09650 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_09650 PF16736 Single Cache-like JNUCC6_09655 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_09655 PF00072 Response regulator receiver domain JNUCC6_09665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JNUCC6_09665 PF00056 lactate/malate dehydrogenase, NAD binding domain JNUCC6_09670 PF00180 Isocitrate/isopropylmalate dehydrogenase JNUCC6_09675 PF00285 Citrate synthase, C-terminal domain JNUCC6_09685 PF04186 FxsA cytoplasmic membrane protein JNUCC6_09690 PF00224 Pyruvate kinase, barrel domain JNUCC6_09690 PF02887 Pyruvate kinase, alpha/beta domain JNUCC6_09690 PF00391 PEP-utilising enzyme, mobile domain JNUCC6_09695 PF00365 Phosphofructokinase JNUCC6_09700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JNUCC6_09705 PF17848 Acetyl-coA carboxylase zinc finger domain JNUCC6_09705 PF01039 Carboxyl transferase domain JNUCC6_09710 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_09715 PF14579 Helix-hairpin-helix motif JNUCC6_09715 PF02811 PHP domain JNUCC6_09715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNUCC6_09715 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNUCC6_09715 PF01336 OB-fold nucleic acid binding domain JNUCC6_09720 PF01368 DHH family JNUCC6_09720 PF02272 DHHA1 domain JNUCC6_09725 PF14007 YtpI-like protein JNUCC6_09730 PF00571 CBS domain JNUCC6_09730 PF07085 DRTGG domain JNUCC6_09730 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_09730 PF03061 Thioesterase superfamily JNUCC6_09740 PF01321 Creatinase/Prolidase N-terminal domain JNUCC6_09740 PF00557 Metallopeptidase family M24 JNUCC6_09745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JNUCC6_09745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JNUCC6_09750 PF00582 Universal stress protein family JNUCC6_09755 PF02384 N-6 DNA Methylase JNUCC6_09760 PF08534 Redoxin JNUCC6_09765 PF06271 RDD family JNUCC6_09770 PF01343 Peptidase family S49 JNUCC6_09775 PF00892 EamA-like transporter family JNUCC6_09780 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_09780 PF00501 AMP-binding enzyme JNUCC6_09785 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNUCC6_09790 PF02926 THUMP domain JNUCC6_09790 PF02568 Thiamine biosynthesis protein (ThiI) JNUCC6_09795 PF00266 Aminotransferase class-V JNUCC6_09800 PF06160 Septation ring formation regulator, EzrA JNUCC6_09805 PF02811 PHP domain JNUCC6_09810 PF13185 GAF domain JNUCC6_09815 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_09825 PF01479 S4 domain JNUCC6_09825 PF00163 Ribosomal protein S4/S9 N-terminal domain JNUCC6_09835 PF00581 Rhodanese-like domain JNUCC6_09840 PF02583 Metal-sensitive transcriptional repressor JNUCC6_09850 PF00581 Rhodanese-like domain JNUCC6_09860 PF00579 tRNA synthetases class I (W and Y) JNUCC6_09860 PF01479 S4 domain JNUCC6_09865 PF00912 Transglycosylase JNUCC6_09865 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_09870 PF00583 Acetyltransferase (GNAT) family JNUCC6_09875 PF00571 CBS domain JNUCC6_09880 PF00850 Histone deacetylase domain JNUCC6_09885 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_09890 PF00793 DAHP synthetase I family JNUCC6_09890 PF01817 Chorismate mutase type II JNUCC6_09895 PF02491 SHS2 domain inserted in FTSA JNUCC6_09900 PF12732 YtxH-like protein JNUCC6_09910 PF08245 Mur ligase middle domain JNUCC6_09910 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_09910 PF01225 Mur ligase family, catalytic domain JNUCC6_09915 PF01580 FtsK/SpoIIIE family JNUCC6_09915 PF17854 FtsK alpha domain JNUCC6_09915 PF09397 Ftsk gamma domain JNUCC6_09920 PF14794 Domain of unknown function (DUF4479) JNUCC6_09920 PF01588 Putative tRNA binding domain JNUCC6_09925 PF07285 Protein of unknown function (DUF1444) JNUCC6_09930 PF00085 Thioredoxin JNUCC6_09940 PF01931 Protein of unknown function DUF84 JNUCC6_09945 PF05343 M42 glutamyl aminopeptidase JNUCC6_09950 PF03413 Peptidase propeptide and YPEB domain JNUCC6_09955 PF00753 Metallo-beta-lactamase superfamily JNUCC6_09960 PF02390 Putative methyltransferase JNUCC6_09965 PF00781 Diacylglycerol kinase catalytic domain JNUCC6_09975 PF01063 Amino-transferase class IV JNUCC6_09985 PF01546 Peptidase family M20/M25/M40 JNUCC6_09990 PF08220 DeoR-like helix-turn-helix domain JNUCC6_09995 PF01479 S4 domain JNUCC6_09995 PF00849 RNA pseudouridylate synthase JNUCC6_10000 PF14667 Polysaccharide biosynthesis C-terminal domain JNUCC6_10000 PF01943 Polysaccharide biosynthesis protein JNUCC6_10010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_10010 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_10010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_10015 PF02803 Thiolase, C-terminal domain JNUCC6_10015 PF00108 Thiolase, N-terminal domain JNUCC6_10020 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_10025 PF00501 AMP-binding enzyme JNUCC6_10025 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_10030 PF00501 AMP-binding enzyme JNUCC6_10030 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_10035 PF00106 short chain dehydrogenase JNUCC6_10040 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_10045 PF02515 CoA-transferase family III JNUCC6_10050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_10050 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_10050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_10055 PF02954 Bacterial regulatory protein, Fis family JNUCC6_10055 PF00158 Sigma-54 interaction domain JNUCC6_10055 PF13426 PAS domain JNUCC6_10060 PF00188 Cysteine-rich secretory protein family JNUCC6_10065 PF01027 Inhibitor of apoptosis-promoting Bax1 JNUCC6_10085 PF13603 Leucyl-tRNA synthetase, Domain 2 JNUCC6_10085 PF00133 tRNA synthetases class I (I, L, M and V) JNUCC6_10085 PF08264 Anticodon-binding domain of tRNA JNUCC6_10085 PF09334 tRNA synthetases class I (M) JNUCC6_10090 PF01144 Coenzyme A transferase JNUCC6_10095 PF01144 Coenzyme A transferase JNUCC6_10100 PF07690 Major Facilitator Superfamily JNUCC6_10105 PF04055 Radical SAM superfamily JNUCC6_10105 PF16199 Radical_SAM C-terminal domain JNUCC6_10110 PF06962 Putative rRNA methylase JNUCC6_10115 PF02797 Chalcone and stilbene synthases, C-terminal domain JNUCC6_10115 PF00195 Chalcone and stilbene synthases, N-terminal domain JNUCC6_10120 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JNUCC6_10125 PF00296 Luciferase-like monooxygenase JNUCC6_10130 PF01235 Sodium:alanine symporter family JNUCC6_10135 PF01235 Sodium:alanine symporter family JNUCC6_10140 PF12146 Serine aminopeptidase, S33 JNUCC6_10145 PF00132 Bacterial transferase hexapeptide (six repeats) JNUCC6_10150 PF02773 S-adenosylmethionine synthetase, C-terminal domain JNUCC6_10150 PF02772 S-adenosylmethionine synthetase, central domain JNUCC6_10150 PF00438 S-adenosylmethionine synthetase, N-terminal domain JNUCC6_10155 PF01293 Phosphoenolpyruvate carboxykinase JNUCC6_10165 PF00326 Prolyl oligopeptidase family JNUCC6_10170 PF00293 NUDIX domain JNUCC6_10180 PF08267 Cobalamin-independent synthase, N-terminal domain JNUCC6_10180 PF01717 Cobalamin-independent synthase, Catalytic domain JNUCC6_10200 PF08543 Phosphomethylpyrimidine kinase JNUCC6_10215 PF01979 Amidohydrolase family JNUCC6_10220 PF00210 Ferritin-like domain JNUCC6_10230 PF01809 Putative membrane protein insertion efficiency factor JNUCC6_10235 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JNUCC6_10235 PF01297 Zinc-uptake complex component A periplasmic JNUCC6_10245 PF00005 ABC transporter JNUCC6_10250 PF00072 Response regulator receiver domain JNUCC6_10250 PF04397 LytTr DNA-binding domain JNUCC6_10255 PF00501 AMP-binding enzyme JNUCC6_10255 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_10260 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_10265 PF12697 Alpha/beta hydrolase family JNUCC6_10270 PF16582 Middle domain of thiamine pyrophosphate JNUCC6_10270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNUCC6_10270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JNUCC6_10275 PF00425 chorismate binding enzyme JNUCC6_10290 PF00005 ABC transporter JNUCC6_10305 PF01244 Membrane dipeptidase (Peptidase family M19) JNUCC6_10310 PF07690 Major Facilitator Superfamily JNUCC6_10315 PF01258 Prokaryotic dksA/traR C4-type zinc finger JNUCC6_10320 PF13411 MerR HTH family regulatory protein JNUCC6_10320 PF07739 TipAS antibiotic-recognition domain JNUCC6_10440 PF02308 MgtC family JNUCC6_10450 PF00149 Calcineurin-like phosphoesterase JNUCC6_10455 PF04070 Domain of unknown function (DUF378) JNUCC6_10460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNUCC6_10460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNUCC6_10465 PF00202 Aminotransferase class-III JNUCC6_10470 PF00171 Aldehyde dehydrogenase family JNUCC6_10475 PF13426 PAS domain JNUCC6_10475 PF02954 Bacterial regulatory protein, Fis family JNUCC6_10475 PF00158 Sigma-54 interaction domain JNUCC6_10480 PF00575 S1 RNA binding domain JNUCC6_10490 PF04542 Sigma-70 region 2 JNUCC6_10490 PF08281 Sigma-70, region 4 JNUCC6_10495 PF00209 Sodium:neurotransmitter symporter family JNUCC6_10505 PF08958 Domain of unknown function (DUF1871) JNUCC6_10510 PF00155 Aminotransferase class I and II JNUCC6_10520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JNUCC6_10525 PF07690 Major Facilitator Superfamily JNUCC6_10530 PF00912 Transglycosylase JNUCC6_10530 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_10535 PF17328 Family of unknown function (DUF5366) JNUCC6_10540 PF13244 Domain of unknown function (DUF4040) JNUCC6_10540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNUCC6_10540 PF00361 Proton-conducting membrane transporter JNUCC6_10545 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JNUCC6_10550 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JNUCC6_10555 PF00361 Proton-conducting membrane transporter JNUCC6_10560 PF01899 Na+/H+ ion antiporter subunit JNUCC6_10565 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JNUCC6_10570 PF03334 Na+/H+ antiporter subunit JNUCC6_10580 PF00883 Cytosol aminopeptidase family, catalytic domain JNUCC6_10580 PF02789 Cytosol aminopeptidase family, N-terminal domain JNUCC6_10585 PF02681 Divergent PAP2 family JNUCC6_10590 PF14068 Putative membrane protein JNUCC6_10595 PF00293 NUDIX domain JNUCC6_10595 PF13344 Haloacid dehalogenase-like hydrolase JNUCC6_10600 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_10605 PF01521 Iron-sulphur cluster biosynthesis JNUCC6_10615 PF01106 NifU-like domain JNUCC6_10620 PF07315 Protein of unknown function (DUF1462) JNUCC6_10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_10630 PF07293 Protein of unknown function (DUF1450) JNUCC6_10635 PF13344 Haloacid dehalogenase-like hydrolase JNUCC6_10640 PF01934 Protein of unknown function DUF86 JNUCC6_10650 PF06265 Protein of unknown function (DUF1027) JNUCC6_10655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JNUCC6_10655 PF04055 Radical SAM superfamily JNUCC6_10660 PF09560 Sporulation protein YunB (Spo_YunB) JNUCC6_10665 PF11871 Domain of unknown function (DUF3391) JNUCC6_10665 PF01966 HD domain JNUCC6_10670 PF02872 5'-nucleotidase, C-terminal domain JNUCC6_10675 PF01925 Sulfite exporter TauE/SafE JNUCC6_10680 PF01904 Protein of unknown function DUF72 JNUCC6_10685 PF01458 Uncharacterized protein family (UPF0051) JNUCC6_10690 PF01592 NifU-like N terminal domain JNUCC6_10695 PF00266 Aminotransferase class-V JNUCC6_10700 PF01458 Uncharacterized protein family (UPF0051) JNUCC6_10705 PF00005 ABC transporter JNUCC6_10710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JNUCC6_10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_10715 PF04898 Glutamate synthase central domain JNUCC6_10715 PF01493 GXGXG motif JNUCC6_10715 PF01645 Conserved region in glutamate synthase JNUCC6_10715 PF00310 Glutamine amidotransferases class-II JNUCC6_10720 PF03466 LysR substrate binding domain JNUCC6_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_10730 PF00375 Sodium:dicarboxylate symporter family JNUCC6_10735 PF03180 NLPA lipoprotein JNUCC6_10740 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_10745 PF00005 ABC transporter JNUCC6_10745 PF09383 NIL domain JNUCC6_10750 PF00085 Thioredoxin JNUCC6_10755 PF01751 Toprim domain JNUCC6_10760 PF01597 Glycine cleavage H-protein JNUCC6_10765 PF03960 ArsC family JNUCC6_10770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_10770 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_10775 PF00108 Thiolase, N-terminal domain JNUCC6_10775 PF02803 Thiolase, C-terminal domain JNUCC6_10780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNUCC6_10780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNUCC6_10780 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_10785 PF00085 Thioredoxin JNUCC6_10795 PF01367 5'-3' exonuclease, C-terminal SAM fold JNUCC6_10795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JNUCC6_10805 PF00221 Aromatic amino acid lyase JNUCC6_10810 PF01037 Lrp/AsnC ligand binding domain JNUCC6_10820 PF02566 OsmC-like protein JNUCC6_10835 PF08281 Sigma-70, region 4 JNUCC6_10835 PF04542 Sigma-70 region 2 JNUCC6_10855 PF01323 DSBA-like thioredoxin domain JNUCC6_10860 PF00881 Nitroreductase family JNUCC6_10950 PF01668 SmpB protein JNUCC6_10955 PF17876 Cold shock domain JNUCC6_10955 PF00575 S1 RNA binding domain JNUCC6_10955 PF08206 Ribonuclease B OB domain JNUCC6_10955 PF00773 RNB domain JNUCC6_10960 PF12146 Serine aminopeptidase, S33 JNUCC6_10965 PF03840 Preprotein translocase SecG subunit JNUCC6_10970 PF03952 Enolase, N-terminal domain JNUCC6_10970 PF00113 Enolase, C-terminal TIM barrel domain JNUCC6_10975 PF01676 Metalloenzyme superfamily JNUCC6_10975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JNUCC6_10980 PF00121 Triosephosphate isomerase JNUCC6_10985 PF00162 Phosphoglycerate kinase JNUCC6_10990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JNUCC6_10990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JNUCC6_10995 PF04198 Putative sugar-binding domain JNUCC6_11005 PF04552 Sigma-54, DNA binding domain JNUCC6_11005 PF04963 Sigma-54 factor, core binding domain JNUCC6_11005 PF00309 Sigma-54 factor, Activator interacting domain (AID) JNUCC6_11015 PF04011 LemA family JNUCC6_11020 PF07875 Coat F domain JNUCC6_11025 PF07690 Major Facilitator Superfamily JNUCC6_11030 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_11040 PF00574 Clp protease JNUCC6_11045 PF00381 PTS HPr component phosphorylation site JNUCC6_11050 PF10298 WhiA N-terminal LAGLIDADG-like domain JNUCC6_11050 PF02650 WhiA C-terminal HTH domain JNUCC6_11050 PF14527 WhiA LAGLIDADG-like domain JNUCC6_11055 PF01933 Uncharacterised protein family UPF0052 JNUCC6_11060 PF03668 P-loop ATPase protein family JNUCC6_11065 PF00293 NUDIX domain JNUCC6_11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_11080 PF01502 Phosphoribosyl-AMP cyclohydrolase JNUCC6_11080 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JNUCC6_11085 PF00977 Histidine biosynthesis protein JNUCC6_11090 PF00977 Histidine biosynthesis protein JNUCC6_11095 PF00117 Glutamine amidotransferase class-I JNUCC6_11100 PF00475 Imidazoleglycerol-phosphate dehydratase JNUCC6_11105 PF00815 Histidinol dehydrogenase JNUCC6_11110 PF01634 ATP phosphoribosyltransferase JNUCC6_11115 PF13393 Histidyl-tRNA synthetase JNUCC6_11120 PF14602 Hexapeptide repeat of succinyl-transferase JNUCC6_11125 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_11130 PF01790 Prolipoprotein diacylglyceryl transferase JNUCC6_11135 PF02603 HPr Serine kinase N terminus JNUCC6_11135 PF07475 HPr Serine kinase C-terminal domain JNUCC6_11140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNUCC6_11145 PF08668 HDOD domain JNUCC6_11145 PF00563 EAL domain JNUCC6_11150 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_11155 PF02664 S-Ribosylhomocysteinase (LuxS) JNUCC6_11160 PF09335 SNARE associated Golgi protein JNUCC6_11165 PF07676 WD40-like Beta Propeller Repeat JNUCC6_11165 PF00326 Prolyl oligopeptidase family JNUCC6_11170 PF00324 Amino acid permease JNUCC6_11175 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_11175 PF00501 AMP-binding enzyme JNUCC6_11180 PF02687 FtsX-like permease family JNUCC6_11185 PF00005 ABC transporter JNUCC6_11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_11195 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_11195 PF00072 Response regulator receiver domain JNUCC6_11200 PF03099 Biotin/lipoate A/B protein ligase family JNUCC6_11200 PF10437 Bacterial lipoate protein ligase C-terminus JNUCC6_11215 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_11215 PF17932 Tetracyclin repressor-like, C-terminal domain JNUCC6_11225 PF16736 Single Cache-like JNUCC6_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_11225 PF00989 PAS fold JNUCC6_11225 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_11230 PF00072 Response regulator receiver domain JNUCC6_11230 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_11240 PF01593 Flavin containing amine oxidoreductase JNUCC6_11245 PF00762 Ferrochelatase JNUCC6_11250 PF01208 Uroporphyrinogen decarboxylase (URO-D) JNUCC6_11255 PF03992 Antibiotic biosynthesis monooxygenase JNUCC6_11260 PF07687 Peptidase dimerisation domain JNUCC6_11260 PF01546 Peptidase family M20/M25/M40 JNUCC6_11270 PF00005 ABC transporter JNUCC6_11275 PF01230 HIT domain JNUCC6_11280 PF17099 Tryptophan transporter TrpP JNUCC6_11290 PF01047 MarR family JNUCC6_11305 PF09680 Family of unknown function JNUCC6_11310 PF05698 Bacterial trigger factor protein (TF) C-terminus JNUCC6_11315 PF01966 HD domain JNUCC6_11320 PF13514 AAA domain JNUCC6_11325 PF00149 Calcineurin-like phosphoesterase JNUCC6_11330 PF14120 YhzD-like protein JNUCC6_11335 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_11340 PF00890 FAD binding domain JNUCC6_11345 PF00266 Aminotransferase class-V JNUCC6_11350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNUCC6_11350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNUCC6_11350 PF01842 ACT domain JNUCC6_11355 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_11370 PF02595 Glycerate kinase family JNUCC6_11375 PF05651 Putative sugar diacid recognition JNUCC6_11375 PF17853 GGDEF-like domain JNUCC6_11375 PF13556 PucR C-terminal helix-turn-helix domain JNUCC6_11380 PF04055 Radical SAM superfamily JNUCC6_11390 PF06133 Control of competence regulator ComK, YlbF/YmcA JNUCC6_11395 PF04286 Protein of unknown function (DUF445) JNUCC6_11425 PF00664 ABC transporter transmembrane region JNUCC6_11425 PF00005 ABC transporter JNUCC6_11430 PF00005 ABC transporter JNUCC6_11430 PF00664 ABC transporter transmembrane region JNUCC6_11435 PF00571 CBS domain JNUCC6_11435 PF01595 Cyclin M transmembrane N-terminal domain JNUCC6_11435 PF03471 Transporter associated domain JNUCC6_11440 PF16916 Dimerisation domain of Zinc Transporter JNUCC6_11440 PF01545 Cation efflux family JNUCC6_11445 PF03193 RsgA GTPase JNUCC6_11450 PF00072 Response regulator receiver domain JNUCC6_11450 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_11455 PF13185 GAF domain JNUCC6_11455 PF07730 Histidine kinase JNUCC6_11460 PF02600 Disulfide bond formation protein DsbB JNUCC6_11465 PF00085 Thioredoxin JNUCC6_11470 PF00849 RNA pseudouridylate synthase JNUCC6_11470 PF01479 S4 domain JNUCC6_11475 PF00248 Aldo/keto reductase family JNUCC6_11480 PF00860 Permease family JNUCC6_11490 PF00588 SpoU rRNA Methylase family JNUCC6_11495 PF08331 Domain of unknown function (DUF1730) JNUCC6_11500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JNUCC6_11500 PF01588 Putative tRNA binding domain JNUCC6_11500 PF03484 tRNA synthetase B5 domain JNUCC6_11500 PF03483 B3/4 domain JNUCC6_11500 PF03147 Ferredoxin-fold anticodon binding domain JNUCC6_11510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_11510 PF00005 ABC transporter JNUCC6_11515 PF00877 NlpC/P60 family JNUCC6_11520 PF13378 Enolase C-terminal domain-like JNUCC6_11520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNUCC6_11525 PF17676 LD-carboxypeptidase C-terminal domain JNUCC6_11525 PF02016 LD-carboxypeptidase N-terminal domain JNUCC6_11530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_11535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_11535 PF00005 ABC transporter JNUCC6_11540 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_11540 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_11545 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_11550 PF04951 D-aminopeptidase JNUCC6_11555 PF17676 LD-carboxypeptidase C-terminal domain JNUCC6_11555 PF02016 LD-carboxypeptidase N-terminal domain JNUCC6_11560 PF02423 Ornithine cyclodeaminase/mu-crystallin family JNUCC6_11565 PF00375 Sodium:dicarboxylate symporter family JNUCC6_11570 PF05544 Proline racemase JNUCC6_11685 PF18576 Helix-turn-helix domain JNUCC6_11685 PF14540 Nucleotidyltransferase-like JNUCC6_11690 PF11023 Zinc-ribbon containing domain JNUCC6_11695 PF01475 Ferric uptake regulator family JNUCC6_11700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNUCC6_11705 PF00578 AhpC/TSA family JNUCC6_11710 PF06081 Aromatic acid exporter family member 1 JNUCC6_11715 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_11715 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_11720 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_11725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_11730 PF00005 ABC transporter JNUCC6_11730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_11735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_11735 PF00005 ABC transporter JNUCC6_11740 PF00664 ABC transporter transmembrane region JNUCC6_11740 PF00005 ABC transporter JNUCC6_11745 PF04167 Protein of unknown function (DUF402) JNUCC6_11755 PF14815 NUDIX domain JNUCC6_11755 PF00730 HhH-GPD superfamily base excision DNA repair protein JNUCC6_11755 PF00633 Helix-hairpin-helix motif JNUCC6_11760 PF04307 LexA-binding, inner membrane-associated putative hydrolase JNUCC6_11770 PF14043 WVELL protein JNUCC6_11775 PF08838 Protein of unknown function (DUF1811) JNUCC6_11780 PF02631 RecX family JNUCC6_11785 PF08338 Domain of unknown function (DUF1731) JNUCC6_11785 PF01370 NAD dependent epimerase/dehydratase family JNUCC6_11790 PF01522 Polysaccharide deacetylase JNUCC6_11795 PF01938 TRAM domain JNUCC6_11795 PF05958 tRNA (Uracil-5-)-methyltransferase JNUCC6_11800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_11800 PF00672 HAMP domain JNUCC6_11800 PF02743 Cache domain JNUCC6_11805 PF00398 Ribosomal RNA adenine dimethylase JNUCC6_11810 PF07943 Penicillin-binding protein 5, C-terminal domain JNUCC6_11810 PF00768 D-alanyl-D-alanine carboxypeptidase JNUCC6_11815 PF07690 Major Facilitator Superfamily JNUCC6_11825 PF05681 Fumarate hydratase (Fumerase) JNUCC6_11825 PF05683 Fumarase C-terminus JNUCC6_11835 PF03631 Virulence factor BrkB JNUCC6_11845 PF01235 Sodium:alanine symporter family JNUCC6_11850 PF06569 Protein of unknown function (DUF1128) JNUCC6_11855 PF04227 Indigoidine synthase A like protein JNUCC6_11860 PF00294 pfkB family carbohydrate kinase JNUCC6_11865 PF13677 Membrane MotB of proton-channel complex MotA/MotB JNUCC6_11865 PF00691 OmpA family JNUCC6_11870 PF01618 MotA/TolQ/ExbB proton channel family JNUCC6_11875 PF02073 Thermophilic metalloprotease (M29) JNUCC6_11885 PF00484 Carbonic anhydrase JNUCC6_11890 PF13302 Acetyltransferase (GNAT) domain JNUCC6_11895 PF01432 Peptidase family M3 JNUCC6_11895 PF08439 Oligopeptidase F JNUCC6_11900 PF03976 Polyphosphate kinase 2 (PPK2) JNUCC6_11910 PF00557 Metallopeptidase family M24 JNUCC6_11915 PF09515 Thiamine transporter protein (Thia_YuaJ) JNUCC6_11920 PF01546 Peptidase family M20/M25/M40 JNUCC6_11920 PF07687 Peptidase dimerisation domain JNUCC6_11935 PF02073 Thermophilic metalloprotease (M29) JNUCC6_11940 PF00270 DEAD/DEAH box helicase JNUCC6_11940 PF00271 Helicase conserved C-terminal domain JNUCC6_11945 PF01177 Asp/Glu/Hydantoin racemase JNUCC6_11960 PF00733 Asparagine synthase JNUCC6_11960 PF13537 Glutamine amidotransferase domain JNUCC6_11995 PF00155 Aminotransferase class I and II JNUCC6_12005 PF00082 Subtilase family JNUCC6_12010 PF04239 Protein of unknown function (DUF421) JNUCC6_12015 PF08827 Domain of unknown function (DUF1805) JNUCC6_12020 PF04293 SpoVR like protein JNUCC6_12025 PF04285 Protein of unknown function (DUF444) JNUCC6_12030 PF08298 PrkA AAA domain JNUCC6_12030 PF06798 PrkA serine protein kinase C-terminal domain JNUCC6_12035 PF03734 L,D-transpeptidase catalytic domain JNUCC6_12035 PF01476 LysM domain JNUCC6_12040 PF01717 Cobalamin-independent synthase, Catalytic domain JNUCC6_12045 PF03698 Uncharacterised protein family (UPF0180) JNUCC6_12050 PF00575 S1 RNA binding domain JNUCC6_12055 PF01965 DJ-1/PfpI family JNUCC6_12060 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNUCC6_12065 PF07690 Major Facilitator Superfamily JNUCC6_12070 PF01717 Cobalamin-independent synthase, Catalytic domain JNUCC6_12075 PF07308 Protein of unknown function (DUF1456) JNUCC6_12080 PF07690 Major Facilitator Superfamily JNUCC6_12090 PF05958 tRNA (Uracil-5-)-methyltransferase JNUCC6_12090 PF01938 TRAM domain JNUCC6_12095 PF02322 Cytochrome bd terminal oxidase subunit II JNUCC6_12100 PF01654 Cytochrome bd terminal oxidase subunit I JNUCC6_12105 PF00781 Diacylglycerol kinase catalytic domain JNUCC6_12120 PF02934 GatB/GatE catalytic domain JNUCC6_12120 PF02637 GatB domain JNUCC6_12125 PF01425 Amidase JNUCC6_12130 PF02686 Glu-tRNAGln amidotransferase C subunit JNUCC6_12135 PF07537 CamS sex pheromone cAM373 precursor JNUCC6_12140 PF03120 NAD-dependent DNA ligase OB-fold domain JNUCC6_12140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JNUCC6_12140 PF01653 NAD-dependent DNA ligase adenylation domain JNUCC6_12140 PF12826 Helix-hairpin-helix motif JNUCC6_12140 PF00533 BRCA1 C Terminus (BRCT) domain JNUCC6_12145 PF13361 UvrD-like helicase C-terminal domain JNUCC6_12145 PF00580 UvrD/REP helicase N-terminal domain JNUCC6_12150 PF01884 PcrB family JNUCC6_12155 PF01371 Trp repressor protein JNUCC6_12160 PF11258 Protein of unknown function (DUF3048) N-terminal domain JNUCC6_12160 PF17479 Protein of unknown function (DUF3048) C-terminal domain JNUCC6_12165 PF01979 Amidohydrolase family JNUCC6_12165 PF13382 Adenine deaminase C-terminal domain JNUCC6_12175 PF02843 Phosphoribosylglycinamide synthetase, C domain JNUCC6_12175 PF02844 Phosphoribosylglycinamide synthetase, N domain JNUCC6_12175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JNUCC6_12180 PF02142 MGS-like domain JNUCC6_12180 PF01808 AICARFT/IMPCHase bienzyme JNUCC6_12185 PF00551 Formyl transferase JNUCC6_12190 PF02769 AIR synthase related protein, C-terminal domain JNUCC6_12190 PF00586 AIR synthase related protein, N-terminal domain JNUCC6_12195 PF00156 Phosphoribosyl transferase domain JNUCC6_12200 PF02769 AIR synthase related protein, C-terminal domain JNUCC6_12200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JNUCC6_12200 PF00586 AIR synthase related protein, N-terminal domain JNUCC6_12210 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JNUCC6_12215 PF01259 SAICAR synthetase JNUCC6_12220 PF00206 Lyase JNUCC6_12220 PF10397 Adenylosuccinate lyase C-terminus JNUCC6_12225 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JNUCC6_12225 PF02222 ATP-grasp domain JNUCC6_12230 PF00731 AIR carboxylase JNUCC6_12235 PF14044 NETI protein JNUCC6_12240 PF03949 Malic enzyme, NAD binding domain JNUCC6_12240 PF00390 Malic enzyme, N-terminal domain JNUCC6_12260 PF00860 Permease family JNUCC6_12280 PF02690 Na+/Pi-cotransporter JNUCC6_12285 PF00117 Glutamine amidotransferase class-I JNUCC6_12285 PF00958 GMP synthase C terminal domain JNUCC6_12285 PF02540 NAD synthase JNUCC6_12290 PF11992 Domain of unknown function (DUF3488) JNUCC6_12290 PF13559 Domain of unknown function (DUF4129) JNUCC6_12290 PF01841 Transglutaminase-like superfamily JNUCC6_12300 PF17863 AAA lid domain JNUCC6_12300 PF07726 ATPase family associated with various cellular activities (AAA) JNUCC6_12305 PF02540 NAD synthase JNUCC6_12310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JNUCC6_12310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JNUCC6_12310 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JNUCC6_12315 PF00156 Phosphoribosyl transferase domain JNUCC6_12320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNUCC6_12320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNUCC6_12325 PF00005 ABC transporter JNUCC6_12330 PF03649 Uncharacterised protein family (UPF0014) JNUCC6_12335 PF03358 NADPH-dependent FMN reductase JNUCC6_12340 PF06628 Catalase-related immune-responsive JNUCC6_12340 PF00199 Catalase JNUCC6_12345 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_12345 PF00072 Response regulator receiver domain JNUCC6_12350 PF07730 Histidine kinase JNUCC6_12355 PF00487 Fatty acid desaturase JNUCC6_12360 PF00809 Pterin binding enzyme JNUCC6_12360 PF02607 B12 binding domain JNUCC6_12360 PF02965 Vitamin B12 dependent methionine synthase, activation domain JNUCC6_12360 PF02310 B12 binding domain JNUCC6_12360 PF02574 Homocysteine S-methyltransferase JNUCC6_12365 PF02219 Methylenetetrahydrofolate reductase JNUCC6_12365 PF02574 Homocysteine S-methyltransferase JNUCC6_12375 PF01593 Flavin containing amine oxidoreductase JNUCC6_12380 PF00999 Sodium/hydrogen exchanger family JNUCC6_12385 PF00557 Metallopeptidase family M24 JNUCC6_12385 PF01321 Creatinase/Prolidase N-terminal domain JNUCC6_12390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_12400 PF00005 ABC transporter JNUCC6_12400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_12405 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_12405 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_12410 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_12415 PF00309 Sigma-54 factor, Activator interacting domain (AID) JNUCC6_12415 PF04963 Sigma-54 factor, core binding domain JNUCC6_12415 PF04552 Sigma-54, DNA binding domain JNUCC6_12420 PF00171 Aldehyde dehydrogenase family JNUCC6_12425 PF00701 Dihydrodipicolinate synthetase family JNUCC6_12430 PF05544 Proline racemase JNUCC6_12435 PF05544 Proline racemase JNUCC6_12440 PF01266 FAD dependent oxidoreductase JNUCC6_12445 PF00158 Sigma-54 interaction domain JNUCC6_12445 PF00989 PAS fold JNUCC6_12445 PF02954 Bacterial regulatory protein, Fis family JNUCC6_12450 PF04324 BFD-like [2Fe-2S] binding domain JNUCC6_12450 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_12460 PF04324 BFD-like [2Fe-2S] binding domain JNUCC6_12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_12465 PF01235 Sodium:alanine symporter family JNUCC6_12470 PF01757 Acyltransferase family JNUCC6_12475 PF01520 N-acetylmuramoyl-L-alanine amidase JNUCC6_12475 PF04122 Putative cell wall binding repeat 2 JNUCC6_12495 PF05675 Protein of unknown function (DUF817) JNUCC6_12500 PF02447 GntP family permease JNUCC6_12505 PF01116 Fructose-bisphosphate aldolase class-II JNUCC6_12515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNUCC6_12515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNUCC6_12520 PF07729 FCD domain JNUCC6_12520 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_12530 PF10996 Beta-Casp domain JNUCC6_12530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNUCC6_12530 PF00753 Metallo-beta-lactamase superfamily JNUCC6_12535 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_12545 PF00005 ABC transporter JNUCC6_12545 PF08402 TOBE domain JNUCC6_12555 PF00199 Catalase JNUCC6_12555 PF06628 Catalase-related immune-responsive JNUCC6_12555 PF18011 C-terminal domain found in long catalases JNUCC6_12560 PF00106 short chain dehydrogenase JNUCC6_12565 PF09370 Phosphoenolpyruvate hydrolase-like JNUCC6_12575 PF09370 Phosphoenolpyruvate hydrolase-like JNUCC6_12580 PF01235 Sodium:alanine symporter family JNUCC6_12590 PF10026 Predicted Zn-dependent protease (DUF2268) JNUCC6_12595 PF08241 Methyltransferase domain JNUCC6_12605 PF00118 TCP-1/cpn60 chaperonin family JNUCC6_12610 PF00166 Chaperonin 10 Kd subunit JNUCC6_12615 PF02517 CPBP intramembrane metalloprotease JNUCC6_12620 PF00902 Sec-independent protein translocase protein (TatC) JNUCC6_12625 PF02416 mttA/Hcf106 family JNUCC6_12630 PF02629 CoA binding domain JNUCC6_12630 PF06971 Putative DNA-binding protein N-terminus JNUCC6_12635 PF16326 ABC transporter C-terminal domain JNUCC6_12635 PF12848 ABC transporter JNUCC6_12635 PF00005 ABC transporter JNUCC6_12640 PF00814 Glycoprotease family JNUCC6_12645 PF00583 Acetyltransferase (GNAT) family JNUCC6_12650 PF00814 Glycoprotease family JNUCC6_12655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JNUCC6_12720 PF10263 SprT-like family JNUCC6_12725 PF16921 Tex protein YqgF-like domain JNUCC6_12725 PF09371 Tex-like protein N-terminal domain JNUCC6_12725 PF00575 S1 RNA binding domain JNUCC6_12725 PF17674 HHH domain JNUCC6_12730 PF04545 Sigma-70, region 4 JNUCC6_12730 PF04542 Sigma-70 region 2 JNUCC6_12730 PF04539 Sigma-70 region 3 JNUCC6_12735 PF13581 Histidine kinase-like ATPase domain JNUCC6_12740 PF01740 STAS domain JNUCC6_12745 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JNUCC6_12755 PF01168 Alanine racemase, N-terminal domain JNUCC6_12755 PF00842 Alanine racemase, C-terminal domain JNUCC6_12765 PF01648 4'-phosphopantetheinyl transferase superfamily JNUCC6_12770 PF01694 Rhomboid family JNUCC6_12775 PF03703 Bacterial PH domain JNUCC6_12780 PF03703 Bacterial PH domain JNUCC6_12785 PF00270 DEAD/DEAH box helicase JNUCC6_12785 PF00271 Helicase conserved C-terminal domain JNUCC6_12790 PF00561 alpha/beta hydrolase fold JNUCC6_12795 PF01225 Mur ligase family, catalytic domain JNUCC6_12795 PF08245 Mur ligase middle domain JNUCC6_12795 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_12800 PF07478 D-ala D-ala ligase C-terminus JNUCC6_12800 PF01820 D-ala D-ala ligase N-terminus JNUCC6_12810 PF01098 Cell cycle protein JNUCC6_12825 PF00403 Heavy-metal-associated domain JNUCC6_12830 PF07690 Major Facilitator Superfamily JNUCC6_12835 PF07690 Major Facilitator Superfamily JNUCC6_12845 PF00266 Aminotransferase class-V JNUCC6_12855 PF00375 Sodium:dicarboxylate symporter family JNUCC6_12860 PF13396 Phospholipase_D-nuclease N-terminal JNUCC6_12860 PF13091 PLD-like domain JNUCC6_12865 PF02557 D-alanyl-D-alanine carboxypeptidase JNUCC6_12875 PF02096 60Kd inner membrane protein JNUCC6_12880 PF12833 Helix-turn-helix domain JNUCC6_12885 PF00072 Response regulator receiver domain JNUCC6_12885 PF04397 LytTr DNA-binding domain JNUCC6_12890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JNUCC6_12890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JNUCC6_12910 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_12910 PF08360 QacR-like protein, C-terminal region JNUCC6_12925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_12935 PF17783 CvfB-like winged helix domain JNUCC6_12935 PF13509 S1 domain JNUCC6_12940 PF02742 Iron dependent repressor, metal binding and dimerisation domain JNUCC6_12940 PF01325 Iron dependent repressor, N-terminal DNA binding domain JNUCC6_12955 PF13302 Acetyltransferase (GNAT) domain JNUCC6_12960 PF00403 Heavy-metal-associated domain JNUCC6_12965 PF01022 Bacterial regulatory protein, arsR family JNUCC6_12970 PF03576 Peptidase family S58 JNUCC6_12975 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JNUCC6_12980 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JNUCC6_12985 PF01804 Penicillin amidase JNUCC6_12990 PF03372 Endonuclease/Exonuclease/phosphatase family JNUCC6_12995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JNUCC6_12995 PF01565 FAD binding domain JNUCC6_13000 PF01638 HxlR-like helix-turn-helix JNUCC6_13005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_13010 PF04264 YceI-like domain JNUCC6_13020 PF02525 Flavodoxin-like fold JNUCC6_13025 PF01323 DSBA-like thioredoxin domain JNUCC6_13030 PF01266 FAD dependent oxidoreductase JNUCC6_13030 PF00355 Rieske [2Fe-2S] domain JNUCC6_13035 PF01368 DHH family JNUCC6_13035 PF02833 DHHA2 domain JNUCC6_13045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNUCC6_13045 PF13378 Enolase C-terminal domain-like JNUCC6_13050 PF01546 Peptidase family M20/M25/M40 JNUCC6_13050 PF07687 Peptidase dimerisation domain JNUCC6_13055 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JNUCC6_13055 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JNUCC6_13060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JNUCC6_13060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JNUCC6_13065 PF00230 Major intrinsic protein JNUCC6_13070 PF00902 Sec-independent protein translocase protein (TatC) JNUCC6_13075 PF02416 mttA/Hcf106 family JNUCC6_13080 PF05199 GMC oxidoreductase JNUCC6_13080 PF00732 GMC oxidoreductase JNUCC6_13085 PF13618 Gluconate 2-dehydrogenase subunit 3 JNUCC6_13090 PF10431 C-terminal, D2-small domain, of ClpB protein JNUCC6_13090 PF07724 AAA domain (Cdc48 subfamily) JNUCC6_13100 PF07690 Major Facilitator Superfamily JNUCC6_13105 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_13110 PF00288 GHMP kinases N terminal domain JNUCC6_13110 PF08544 GHMP kinases C terminal JNUCC6_13115 PF02082 Transcriptional regulator JNUCC6_13120 PF13460 NAD(P)H-binding JNUCC6_13125 PF02535 ZIP Zinc transporter JNUCC6_13130 PF07690 Major Facilitator Superfamily JNUCC6_13145 PF03992 Antibiotic biosynthesis monooxygenase JNUCC6_13150 PF01497 Periplasmic binding protein JNUCC6_13155 PF00005 ABC transporter JNUCC6_13160 PF01032 FecCD transport family JNUCC6_13165 PF01032 FecCD transport family JNUCC6_13170 PF00854 POT family JNUCC6_13175 PF00005 ABC transporter JNUCC6_13175 PF00664 ABC transporter transmembrane region JNUCC6_13180 PF01926 50S ribosome-binding GTPase JNUCC6_13180 PF16360 GTP-binding GTPase Middle Region JNUCC6_13180 PF13167 GTP-binding GTPase N-terminal JNUCC6_13190 PF00474 Sodium:solute symporter family JNUCC6_13195 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_13195 PF00501 AMP-binding enzyme JNUCC6_13200 PF12729 Four helix bundle sensory module for signal transduction JNUCC6_13200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_13200 PF00672 HAMP domain JNUCC6_13205 PF03553 Na+/H+ antiporter family JNUCC6_13215 PF09375 Imelysin JNUCC6_13220 PF04261 Dyp-type peroxidase family JNUCC6_13220 PF10518 TAT (twin-arginine translocation) pathway signal sequence JNUCC6_13225 PF03239 Iron permease FTR1 family JNUCC6_13230 PF02687 FtsX-like permease family JNUCC6_13230 PF12704 MacB-like periplasmic core domain JNUCC6_13235 PF00005 ABC transporter JNUCC6_13240 PF04542 Sigma-70 region 2 JNUCC6_13240 PF08281 Sigma-70, region 4 JNUCC6_13245 PF13739 Deacetylase PdaC JNUCC6_13245 PF11738 Protein of unknown function (DUF3298) JNUCC6_13250 PF10415 Fumarase C C-terminus JNUCC6_13250 PF00206 Lyase JNUCC6_13260 PF01145 SPFH domain / Band 7 family JNUCC6_13260 PF15975 Flotillin JNUCC6_13270 PF01865 Protein of unknown function DUF47 JNUCC6_13275 PF01384 Phosphate transporter family JNUCC6_13280 PF03176 MMPL family JNUCC6_13285 PF01738 Dienelactone hydrolase family JNUCC6_13305 PF03129 Anticodon binding domain JNUCC6_13305 PF09180 Prolyl-tRNA synthetase, C-terminal JNUCC6_13305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_13310 PF00293 NUDIX domain JNUCC6_13315 PF01594 AI-2E family transporter JNUCC6_13320 PF00884 Sulfatase JNUCC6_13330 PF05225 helix-turn-helix, Psq domain JNUCC6_13330 PF02810 SEC-C motif JNUCC6_13355 PF03170 Bacterial cellulose synthase subunit JNUCC6_13365 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JNUCC6_13380 PF01709 Transcriptional regulator JNUCC6_13385 PF04228 Putative neutral zinc metallopeptidase JNUCC6_13390 PF03176 MMPL family JNUCC6_13395 PF10502 Signal peptidase, peptidase S26 JNUCC6_13405 PF01553 Acyltransferase JNUCC6_13410 PF00293 NUDIX domain JNUCC6_13415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_13430 PF03551 Transcriptional regulator PadR-like family JNUCC6_13445 PF02016 LD-carboxypeptidase N-terminal domain JNUCC6_13445 PF17676 LD-carboxypeptidase C-terminal domain JNUCC6_13455 PF01926 50S ribosome-binding GTPase JNUCC6_13455 PF07650 KH domain JNUCC6_13460 PF05225 helix-turn-helix, Psq domain JNUCC6_13460 PF02810 SEC-C motif JNUCC6_13470 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_13470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNUCC6_13485 PF08241 Methyltransferase domain JNUCC6_13490 PF01554 MatE JNUCC6_13495 PF03070 TENA/THI-4/PQQC family JNUCC6_13500 PF02110 Hydroxyethylthiazole kinase family JNUCC6_13505 PF08543 Phosphomethylpyrimidine kinase JNUCC6_13510 PF02581 Thiamine monophosphate synthase JNUCC6_13520 PF01040 UbiA prenyltransferase family JNUCC6_13530 PF01638 HxlR-like helix-turn-helix JNUCC6_13535 PF13537 Glutamine amidotransferase domain JNUCC6_13535 PF00733 Asparagine synthase JNUCC6_13540 PF00561 alpha/beta hydrolase fold JNUCC6_13555 PF00893 Small Multidrug Resistance protein JNUCC6_13560 PF00893 Small Multidrug Resistance protein JNUCC6_13580 PF13673 Acetyltransferase (GNAT) domain JNUCC6_13585 PF00892 EamA-like transporter family JNUCC6_13595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_13595 PF00672 HAMP domain JNUCC6_13595 PF02743 Cache domain JNUCC6_13600 PF13350 Tyrosine phosphatase family JNUCC6_13605 PF02743 Cache domain JNUCC6_13605 PF00672 HAMP domain JNUCC6_13605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_13615 PF07690 Major Facilitator Superfamily JNUCC6_13630 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JNUCC6_13635 PF00072 Response regulator receiver domain JNUCC6_13635 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_13640 PF00672 HAMP domain JNUCC6_13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_13640 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_13645 PF02687 FtsX-like permease family JNUCC6_13650 PF00005 ABC transporter JNUCC6_13660 PF07563 Protein of unknown function (DUF1541) JNUCC6_13680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_13690 PF13520 Amino acid permease JNUCC6_13710 PF00293 NUDIX domain JNUCC6_13715 PF00082 Subtilase family JNUCC6_13735 PF08274 PhnA Zinc-Ribbon JNUCC6_13735 PF03831 PhnA domain JNUCC6_13740 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_13760 PF00892 EamA-like transporter family JNUCC6_13765 PF00465 Iron-containing alcohol dehydrogenase JNUCC6_13770 PF03358 NADPH-dependent FMN reductase JNUCC6_13780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_13785 PF01047 MarR family JNUCC6_13790 PF03358 NADPH-dependent FMN reductase JNUCC6_13795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_13800 PF01047 MarR family JNUCC6_13805 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JNUCC6_13810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_13810 PF00672 HAMP domain JNUCC6_13810 PF02743 Cache domain JNUCC6_13815 PF01596 O-methyltransferase JNUCC6_13820 PF03466 LysR substrate binding domain JNUCC6_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_13830 PF13305 Tetracyclin repressor-like, C-terminal domain JNUCC6_13830 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_13835 PF00753 Metallo-beta-lactamase superfamily JNUCC6_13840 PF01810 LysE type translocator JNUCC6_13845 PF00857 Isochorismatase family JNUCC6_13855 PF00547 Urease, gamma subunit JNUCC6_13860 PF00699 Urease beta subunit JNUCC6_13865 PF00449 Urease alpha-subunit, N-terminal domain JNUCC6_13865 PF01979 Amidohydrolase family JNUCC6_13870 PF05194 UreE urease accessory protein, C-terminal domain JNUCC6_13870 PF02814 UreE urease accessory protein, N-terminal domain JNUCC6_13875 PF01730 UreF JNUCC6_13880 PF02492 CobW/HypB/UreG, nucleotide-binding domain JNUCC6_13885 PF01774 UreD urease accessory protein JNUCC6_13895 PF00005 ABC transporter JNUCC6_13900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_13900 PF00005 ABC transporter JNUCC6_13905 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_13905 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_13910 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_13915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_13920 PF05163 DinB family JNUCC6_13925 PF01979 Amidohydrolase family JNUCC6_13930 PF00860 Permease family JNUCC6_13940 PF07690 Major Facilitator Superfamily JNUCC6_13945 PF07690 Major Facilitator Superfamily JNUCC6_13950 PF00005 ABC transporter JNUCC6_13970 PF01380 SIS domain JNUCC6_13975 PF01965 DJ-1/PfpI family JNUCC6_13980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JNUCC6_13980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JNUCC6_13980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JNUCC6_13980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JNUCC6_13985 PF07949 YbbR-like protein JNUCC6_13990 PF02457 DisA bacterial checkpoint controller nucleotide-binding JNUCC6_13995 PF13490 Putative zinc-finger JNUCC6_14000 PF08281 Sigma-70, region 4 JNUCC6_14000 PF04542 Sigma-70 region 2 JNUCC6_14005 PF00491 Arginase family JNUCC6_14130 PF01336 OB-fold nucleic acid binding domain JNUCC6_14130 PF00152 tRNA synthetases class II (D, K and N) JNUCC6_14135 PF01381 Helix-turn-helix JNUCC6_14140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JNUCC6_14145 PF02152 Dihydroneopterin aldolase JNUCC6_14150 PF00809 Pterin binding enzyme JNUCC6_14155 PF01063 Amino-transferase class IV JNUCC6_14160 PF00117 Glutamine amidotransferase class-I JNUCC6_14165 PF04715 Anthranilate synthase component I, N terminal region JNUCC6_14165 PF00425 chorismate binding enzyme JNUCC6_14170 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_14175 PF01430 Hsp33 protein JNUCC6_14180 PF03309 Type III pantothenate kinase JNUCC6_14185 PF17862 AAA+ lid domain JNUCC6_14185 PF06480 FtsH Extracellular JNUCC6_14185 PF01434 Peptidase family M41 JNUCC6_14185 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_14190 PF00156 Phosphoribosyl transferase domain JNUCC6_14195 PF11734 TilS substrate C-terminal domain JNUCC6_14195 PF01171 PP-loop family JNUCC6_14195 PF00156 Phosphoribosyl transferase domain JNUCC6_14215 PF00575 S1 RNA binding domain JNUCC6_14220 PF04977 Septum formation initiator JNUCC6_14230 PF07873 YabP family JNUCC6_14235 PF01479 S4 domain JNUCC6_14240 PF03819 MazG nucleotide pyrophosphohydrolase domain JNUCC6_14240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_14245 PF01943 Polysaccharide biosynthesis protein JNUCC6_14245 PF14667 Polysaccharide biosynthesis C-terminal domain JNUCC6_14255 PF15714 Stage V sporulation protein T C-terminal, transcription factor JNUCC6_14255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNUCC6_14260 PF03461 TRCF domain JNUCC6_14260 PF00270 DEAD/DEAH box helicase JNUCC6_14260 PF02559 CarD-like/TRCF domain JNUCC6_14260 PF00271 Helicase conserved C-terminal domain JNUCC6_14260 PF17757 UvrB interaction domain JNUCC6_14270 PF01195 Peptidyl-tRNA hydrolase JNUCC6_14275 PF04914 DltD protein JNUCC6_14280 PF00550 Phosphopantetheine attachment site JNUCC6_14285 PF03062 MBOAT, membrane-bound O-acyltransferase family JNUCC6_14290 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_14290 PF00501 AMP-binding enzyme JNUCC6_14300 PF01386 Ribosomal L25p family JNUCC6_14300 PF14693 Ribosomal protein TL5, C-terminal domain JNUCC6_14305 PF14572 Phosphoribosyl synthetase-associated domain JNUCC6_14305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JNUCC6_14310 PF00132 Bacterial transferase hexapeptide (six repeats) JNUCC6_14310 PF00483 Nucleotidyl transferase JNUCC6_14315 PF04026 SpoVG JNUCC6_14320 PF01042 Endoribonuclease L-PSP JNUCC6_14325 PF09182 Bacterial purine repressor, N-terminal JNUCC6_14325 PF00156 Phosphoribosyl transferase domain JNUCC6_14330 PF08544 GHMP kinases C terminal JNUCC6_14330 PF00288 GHMP kinases N terminal domain JNUCC6_14335 PF00269 Small, acid-soluble spore proteins, alpha/beta type JNUCC6_14340 PF06257 Biofilm formation stimulator VEG JNUCC6_14345 PF00398 Ribosomal RNA adenine dimethylase JNUCC6_14350 PF13331 Domain of unknown function (DUF4093) JNUCC6_14350 PF13662 Toprim domain JNUCC6_14355 PF07501 G5 domain JNUCC6_14355 PF03990 G5-linked-Ubiquitin-like domain JNUCC6_14355 PF06725 3D domain JNUCC6_14360 PF01026 TatD related DNase JNUCC6_14365 PF09334 tRNA synthetases class I (M) JNUCC6_14365 PF01588 Putative tRNA binding domain JNUCC6_14365 PF08264 Anticodon-binding domain of tRNA JNUCC6_14370 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JNUCC6_14370 PF18277 AbrB C-terminal domain JNUCC6_14375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JNUCC6_14380 PF01541 GIY-YIG catalytic domain JNUCC6_14385 PF05175 Methyltransferase small domain JNUCC6_14390 PF06156 Initiation control protein YabA JNUCC6_14395 PF04468 PSP1 C-terminal conserved region JNUCC6_14400 PF09115 DNA polymerase III, delta subunit, C terminal JNUCC6_14405 PF03885 Protein of unknown function (DUF327) JNUCC6_14410 PF06153 Cyclic-di-AMP receptor JNUCC6_14415 PF02223 Thymidylate kinase JNUCC6_14445 PF13662 Toprim domain JNUCC6_14445 PF02132 RecR protein JNUCC6_14450 PF02575 YbaB/EbfC DNA-binding family JNUCC6_14455 PF12169 DNA polymerase III subunits gamma and tau domain III JNUCC6_14470 PF03641 Possible lysine decarboxylase JNUCC6_14475 PF01712 Deoxynucleoside kinase JNUCC6_14480 PF01712 Deoxynucleoside kinase JNUCC6_14485 PF01476 LysM domain JNUCC6_14485 PF00704 Glycosyl hydrolases family 18 JNUCC6_14500 PF02403 Seryl-tRNA synthetase N-terminal domain JNUCC6_14500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_14505 PF01174 SNO glutamine amidotransferase family JNUCC6_14510 PF01680 SOR/SNZ family JNUCC6_14515 PF00155 Aminotransferase class I and II JNUCC6_14515 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_14520 PF07943 Penicillin-binding protein 5, C-terminal domain JNUCC6_14520 PF00768 D-alanyl-D-alanine carboxypeptidase JNUCC6_14525 PF00478 IMP dehydrogenase / GMP reductase domain JNUCC6_14525 PF00571 CBS domain JNUCC6_14530 PF00255 Glutathione peroxidase JNUCC6_14550 PF01966 HD domain JNUCC6_14555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_14560 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_14565 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_14570 PF00005 ABC transporter JNUCC6_14570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_14575 PF00005 ABC transporter JNUCC6_14575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_14580 PF00521 DNA gyrase/topoisomerase IV, subunit A JNUCC6_14580 PF03989 DNA gyrase C-terminal domain, beta-propeller JNUCC6_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_14585 PF00986 DNA gyrase B subunit, carboxyl terminus JNUCC6_14585 PF00204 DNA gyrase B JNUCC6_14585 PF01751 Toprim domain JNUCC6_14590 PF02463 RecF/RecN/SMC N terminal domain JNUCC6_14600 PF00712 DNA polymerase III beta subunit, N-terminal domain JNUCC6_14600 PF02767 DNA polymerase III beta subunit, central domain JNUCC6_14600 PF02768 DNA polymerase III beta subunit, C-terminal domain JNUCC6_14605 PF08299 Bacterial dnaA protein helix-turn-helix JNUCC6_14605 PF11638 DnaA N-terminal domain JNUCC6_14605 PF00308 Bacterial dnaA protein JNUCC6_14610 PF00468 Ribosomal protein L34 JNUCC6_14615 PF00825 Ribonuclease P JNUCC6_14620 PF02096 60Kd inner membrane protein JNUCC6_14625 PF01424 R3H domain JNUCC6_14625 PF14804 Jag N-terminus JNUCC6_14630 PF10396 GTP-binding protein TrmE N-terminus JNUCC6_14630 PF12631 MnmE helical domain JNUCC6_14630 PF01926 50S ribosome-binding GTPase JNUCC6_14635 PF13932 GidA associated domain JNUCC6_14635 PF01134 Glucose inhibited division protein A JNUCC6_14640 PF02527 rRNA small subunit methyltransferase G JNUCC6_14645 PF02195 ParB-like nuclease domain JNUCC6_14645 PF17762 HTH domain found in ParB protein JNUCC6_14650 PF13614 AAA domain JNUCC6_14655 PF02195 ParB-like nuclease domain JNUCC6_14655 PF17762 HTH domain found in ParB protein JNUCC6_14660 PF04474 Protein of unknown function (DUF554) JNUCC6_14665 PF06866 Protein of unknown function (DUF1256) JNUCC6_14670 PF00924 Mechanosensitive ion channel JNUCC6_14675 PF06107 Bacterial protein of unknown function (DUF951) JNUCC6_14680 PF06071 Protein of unknown function (DUF933) JNUCC6_14680 PF01926 50S ribosome-binding GTPase JNUCC6_14690 PF01250 Ribosomal protein S6 JNUCC6_14695 PF00436 Single-strand binding protein family JNUCC6_14700 PF01084 Ribosomal protein S18 JNUCC6_14710 PF02272 DHHA1 domain JNUCC6_14710 PF01368 DHH family JNUCC6_14715 PF03948 Ribosomal protein L9, C-terminal domain JNUCC6_14715 PF01281 Ribosomal protein L9, N-terminal domain JNUCC6_14720 PF00772 DnaB-like helicase N terminal domain JNUCC6_14720 PF03796 DnaB-like helicase C terminal domain JNUCC6_14725 PF00709 Adenylosuccinate synthetase JNUCC6_14740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_14740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_14745 PF01551 Peptidase family M23 JNUCC6_14745 PF01464 Transglycosylase SLT domain JNUCC6_14745 PF10145 Phage-related minor tail protein JNUCC6_14750 PF00072 Response regulator receiver domain JNUCC6_14750 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_14755 PF00672 HAMP domain JNUCC6_14755 PF13426 PAS domain JNUCC6_14755 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_14760 PF07435 YycH protein JNUCC6_14770 PF00753 Metallo-beta-lactamase superfamily JNUCC6_14775 PF13180 PDZ domain JNUCC6_14785 PF02590 Predicted SPOUT methyltransferase JNUCC6_14800 PF06039 Malate:quinone oxidoreductase (Mqo) JNUCC6_14815 PF02652 L-lactate permease JNUCC6_14820 PF00056 lactate/malate dehydrogenase, NAD binding domain JNUCC6_14820 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JNUCC6_14840 PF06177 QueT transporter JNUCC6_14850 PF02040 Arsenical pump membrane protein JNUCC6_14855 PF06146 Phosphate-starvation-inducible E JNUCC6_14860 PF03880 DbpA RNA binding domain JNUCC6_14860 PF00270 DEAD/DEAH box helicase JNUCC6_14860 PF00271 Helicase conserved C-terminal domain JNUCC6_14875 PF03062 MBOAT, membrane-bound O-acyltransferase family JNUCC6_14885 PF01497 Periplasmic binding protein JNUCC6_14890 PF01032 FecCD transport family JNUCC6_14895 PF00005 ABC transporter JNUCC6_14900 PF01243 Pyridoxamine 5'-phosphate oxidase JNUCC6_14900 PF10615 Protein of unknown function (DUF2470) JNUCC6_14905 PF00664 ABC transporter transmembrane region JNUCC6_14905 PF00005 ABC transporter JNUCC6_14910 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_14910 PF00072 Response regulator receiver domain JNUCC6_14915 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_14915 PF18719 ArlS sensor domain JNUCC6_14915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_14920 PF07690 Major Facilitator Superfamily JNUCC6_14925 PF01047 MarR family JNUCC6_14940 PF12833 Helix-turn-helix domain JNUCC6_14940 PF02805 Metal binding domain of Ada JNUCC6_14945 PF00730 HhH-GPD superfamily base excision DNA repair protein JNUCC6_14945 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JNUCC6_14950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JNUCC6_14950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JNUCC6_14960 PF03466 LysR substrate binding domain JNUCC6_14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_14965 PF00478 IMP dehydrogenase / GMP reductase domain JNUCC6_14980 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_14985 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_14990 PF00005 ABC transporter JNUCC6_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_14995 PF03466 LysR substrate binding domain JNUCC6_15000 PF03601 Conserved hypothetical protein 698 JNUCC6_15005 PF01032 FecCD transport family JNUCC6_15010 PF01032 FecCD transport family JNUCC6_15015 PF01497 Periplasmic binding protein JNUCC6_15020 PF00005 ABC transporter JNUCC6_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15035 PF00072 Response regulator receiver domain JNUCC6_15035 PF08664 YcbB domain JNUCC6_15040 PF00375 Sodium:dicarboxylate symporter family JNUCC6_15045 PF00072 Response regulator receiver domain JNUCC6_15045 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_15050 PF18719 ArlS sensor domain JNUCC6_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15050 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_15055 PF05698 Bacterial trigger factor protein (TF) C-terminus JNUCC6_15085 PF01047 MarR family JNUCC6_15090 PF00875 DNA photolyase JNUCC6_15090 PF03441 FAD binding domain of DNA photolyase JNUCC6_15100 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_15105 PF03176 MMPL family JNUCC6_15110 PF13458 Periplasmic binding protein JNUCC6_15115 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_15120 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_15120 PF11862 Domain of unknown function (DUF3382) JNUCC6_15125 PF00005 ABC transporter JNUCC6_15125 PF12399 Branched-chain amino acid ATP-binding cassette transporter JNUCC6_15130 PF00005 ABC transporter JNUCC6_15145 PF00849 RNA pseudouridylate synthase JNUCC6_15145 PF01479 S4 domain JNUCC6_15150 PF00171 Aldehyde dehydrogenase family JNUCC6_15160 PF02522 Aminoglycoside 3-N-acetyltransferase JNUCC6_15170 PF00171 Aldehyde dehydrogenase family JNUCC6_15175 PF03061 Thioesterase superfamily JNUCC6_15180 PF00300 Histidine phosphatase superfamily (branch 1) JNUCC6_15195 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_15200 PF00005 ABC transporter JNUCC6_15205 PF00005 ABC transporter JNUCC6_15210 PF12679 ABC-2 family transporter protein JNUCC6_15215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_15225 PF01544 CorA-like Mg2+ transporter protein JNUCC6_15240 PF05848 CtsR N-terminal HTH domain JNUCC6_15240 PF17727 CtsR C-terminal dimerization domain JNUCC6_15245 PF02151 UvrB/uvrC motif JNUCC6_15250 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JNUCC6_15255 PF02861 Clp amino terminal domain, pathogenicity island component JNUCC6_15255 PF10431 C-terminal, D2-small domain, of ClpB protein JNUCC6_15255 PF07724 AAA domain (Cdc48 subfamily) JNUCC6_15255 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_15255 PF17871 AAA lid domain JNUCC6_15260 PF18073 Rubredoxin metal binding domain JNUCC6_15275 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JNUCC6_15280 PF02542 YgbB family JNUCC6_15285 PF00749 tRNA synthetases class I (E and Q), catalytic domain JNUCC6_15290 PF06426 Serine acetyltransferase, N-terminal JNUCC6_15290 PF00132 Bacterial transferase hexapeptide (six repeats) JNUCC6_15295 PF09190 DALR domain JNUCC6_15295 PF01406 tRNA synthetases class I (C) catalytic domain JNUCC6_15300 PF00636 Ribonuclease III domain JNUCC6_15305 PF08032 RNA 2'-O ribose methyltransferase substrate binding JNUCC6_15305 PF00588 SpoU rRNA Methylase family JNUCC6_15310 PF05991 YacP-like NYN domain JNUCC6_15315 PF04542 Sigma-70 region 2 JNUCC6_15315 PF08281 Sigma-70, region 4 JNUCC6_15320 PF00471 Ribosomal protein L33 JNUCC6_15325 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JNUCC6_15330 PF02357 Transcription termination factor nusG JNUCC6_15330 PF00467 KOW motif JNUCC6_15335 PF00298 Ribosomal protein L11, RNA binding domain JNUCC6_15335 PF03946 Ribosomal protein L11, N-terminal domain JNUCC6_15340 PF00687 Ribosomal protein L1p/L10e family JNUCC6_15345 PF00466 Ribosomal protein L10 JNUCC6_15350 PF00542 Ribosomal protein L7/L12 C-terminal domain JNUCC6_15350 PF16320 Ribosomal protein L7/L12 dimerisation domain JNUCC6_15355 PF05175 Methyltransferase small domain JNUCC6_15360 PF04565 RNA polymerase Rpb2, domain 3 JNUCC6_15360 PF04561 RNA polymerase Rpb2, domain 2 JNUCC6_15360 PF10385 RNA polymerase beta subunit external 1 domain JNUCC6_15360 PF04563 RNA polymerase beta subunit JNUCC6_15360 PF00562 RNA polymerase Rpb2, domain 6 JNUCC6_15360 PF04560 RNA polymerase Rpb2, domain 7 JNUCC6_15365 PF00623 RNA polymerase Rpb1, domain 2 JNUCC6_15365 PF04983 RNA polymerase Rpb1, domain 3 JNUCC6_15365 PF04998 RNA polymerase Rpb1, domain 5 JNUCC6_15365 PF05000 RNA polymerase Rpb1, domain 4 JNUCC6_15365 PF04997 RNA polymerase Rpb1, domain 1 JNUCC6_15370 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JNUCC6_15375 PF00164 Ribosomal protein S12/S23 JNUCC6_15380 PF00177 Ribosomal protein S7p/S5e JNUCC6_15385 PF00679 Elongation factor G C-terminus JNUCC6_15385 PF14492 Elongation Factor G, domain II JNUCC6_15385 PF03764 Elongation factor G, domain IV JNUCC6_15385 PF00009 Elongation factor Tu GTP binding domain JNUCC6_15385 PF03144 Elongation factor Tu domain 2 JNUCC6_15390 PF03144 Elongation factor Tu domain 2 JNUCC6_15390 PF03143 Elongation factor Tu C-terminal domain JNUCC6_15390 PF00009 Elongation factor Tu GTP binding domain JNUCC6_15395 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_15395 PF00072 Response regulator receiver domain JNUCC6_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15405 PF00005 ABC transporter JNUCC6_15410 PF02687 FtsX-like permease family JNUCC6_15415 PF03553 Na+/H+ antiporter family JNUCC6_15415 PF13726 Na+-H+ antiporter family JNUCC6_15420 PF00338 Ribosomal protein S10p/S20e JNUCC6_15425 PF00297 Ribosomal protein L3 JNUCC6_15430 PF00573 Ribosomal protein L4/L1 family JNUCC6_15435 PF00276 Ribosomal protein L23 JNUCC6_15440 PF03947 Ribosomal Proteins L2, C-terminal domain JNUCC6_15440 PF00181 Ribosomal Proteins L2, RNA binding domain JNUCC6_15445 PF00203 Ribosomal protein S19 JNUCC6_15450 PF00237 Ribosomal protein L22p/L17e JNUCC6_15455 PF00189 Ribosomal protein S3, C-terminal domain JNUCC6_15455 PF07650 KH domain JNUCC6_15460 PF00252 Ribosomal protein L16p/L10e JNUCC6_15465 PF00831 Ribosomal L29 protein JNUCC6_15470 PF00366 Ribosomal protein S17 JNUCC6_15475 PF00238 Ribosomal protein L14p/L23e JNUCC6_15480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JNUCC6_15480 PF00467 KOW motif JNUCC6_15485 PF00673 ribosomal L5P family C-terminus JNUCC6_15485 PF00281 Ribosomal protein L5 JNUCC6_15490 PF00253 Ribosomal protein S14p/S29e JNUCC6_15495 PF00410 Ribosomal protein S8 JNUCC6_15500 PF00347 Ribosomal protein L6 JNUCC6_15505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JNUCC6_15510 PF00333 Ribosomal protein S5, N-terminal domain JNUCC6_15510 PF03719 Ribosomal protein S5, C-terminal domain JNUCC6_15515 PF00327 Ribosomal protein L30p/L7e JNUCC6_15520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JNUCC6_15525 PF00344 SecY translocase JNUCC6_15530 PF05191 Adenylate kinase, active site lid JNUCC6_15535 PF01176 Translation initiation factor 1A / IF-1 JNUCC6_15540 PF00444 Ribosomal protein L36 JNUCC6_15545 PF00416 Ribosomal protein S13/S18 JNUCC6_15550 PF00411 Ribosomal protein S11 JNUCC6_15555 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JNUCC6_15555 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JNUCC6_15555 PF01000 RNA polymerase Rpb3/RpoA insert domain JNUCC6_15560 PF01196 Ribosomal protein L17 JNUCC6_15565 PF00005 ABC transporter JNUCC6_15570 PF00005 ABC transporter JNUCC6_15575 PF02361 Cobalt transport protein JNUCC6_15580 PF01416 tRNA pseudouridine synthase JNUCC6_15585 PF00572 Ribosomal protein L13 JNUCC6_15590 PF00380 Ribosomal protein S9/S16 JNUCC6_15595 PF01520 N-acetylmuramoyl-L-alanine amidase JNUCC6_15600 PF10609 NUBPL iron-transfer P-loop NTPase JNUCC6_15605 PF17898 Spore germination GerD central core domain JNUCC6_15610 PF14089 KinB-signalling pathway activation in sporulation JNUCC6_15660 PF01738 Dienelactone hydrolase family JNUCC6_15665 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_15690 PF02583 Metal-sensitive transcriptional repressor JNUCC6_15695 PF00403 Heavy-metal-associated domain JNUCC6_15700 PF00403 Heavy-metal-associated domain JNUCC6_15720 PF16916 Dimerisation domain of Zinc Transporter JNUCC6_15720 PF01545 Cation efflux family JNUCC6_15725 PF01022 Bacterial regulatory protein, arsR family JNUCC6_15730 PF07730 Histidine kinase JNUCC6_15745 PF01047 MarR family JNUCC6_15745 PF00583 Acetyltransferase (GNAT) family JNUCC6_15750 PF00294 pfkB family carbohydrate kinase JNUCC6_15760 PF04239 Protein of unknown function (DUF421) JNUCC6_15765 PF07690 Major Facilitator Superfamily JNUCC6_15785 PF13244 Domain of unknown function (DUF4040) JNUCC6_15785 PF00361 Proton-conducting membrane transporter JNUCC6_15785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JNUCC6_15790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JNUCC6_15795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JNUCC6_15800 PF00361 Proton-conducting membrane transporter JNUCC6_15805 PF01899 Na+/H+ ion antiporter subunit JNUCC6_15810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JNUCC6_15815 PF03334 Na+/H+ antiporter subunit JNUCC6_15820 PF00072 Response regulator receiver domain JNUCC6_15820 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_15825 PF02702 Osmosensitive K+ channel His kinase sensor domain JNUCC6_15825 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15825 PF13493 Domain of unknown function (DUF4118) JNUCC6_15835 PF03814 Potassium-transporting ATPase A subunit JNUCC6_15845 PF02669 K+-transporting ATPase, c chain JNUCC6_15850 PF00583 Acetyltransferase (GNAT) family JNUCC6_15855 PF12704 MacB-like periplasmic core domain JNUCC6_15855 PF02687 FtsX-like permease family JNUCC6_15860 PF00005 ABC transporter JNUCC6_15865 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_15865 PF00989 PAS fold JNUCC6_15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15865 PF16736 Single Cache-like JNUCC6_15870 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_15870 PF00072 Response regulator receiver domain JNUCC6_15880 PF13460 NAD(P)H-binding JNUCC6_15885 PF12796 Ankyrin repeats (3 copies) JNUCC6_15890 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_15895 PF00005 ABC transporter JNUCC6_15925 PF01494 FAD binding domain JNUCC6_15935 PF00375 Sodium:dicarboxylate symporter family JNUCC6_15940 PF01925 Sulfite exporter TauE/SafE JNUCC6_15945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNUCC6_15945 PF01411 tRNA synthetases class II (A) JNUCC6_15945 PF02272 DHHA1 domain JNUCC6_15960 PF00005 ABC transporter JNUCC6_15980 PF02417 Chromate transporter JNUCC6_15985 PF02417 Chromate transporter JNUCC6_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_15995 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_16000 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_16000 PF00072 Response regulator receiver domain JNUCC6_16005 PF01139 tRNA-splicing ligase RtcB JNUCC6_16010 PF08000 Bacterial PH domain JNUCC6_16010 PF11724 YvbH-like oligomerisation region JNUCC6_16035 PF01435 Peptidase family M48 JNUCC6_16040 PF13462 Thioredoxin JNUCC6_16045 PF02600 Disulfide bond formation protein DsbB JNUCC6_16050 PF00005 ABC transporter JNUCC6_16055 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16060 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16065 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_16070 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_16070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_16070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_16075 PF00571 CBS domain JNUCC6_16075 PF00005 ABC transporter JNUCC6_16080 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16085 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JNUCC6_16090 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16105 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_16105 PF00107 Zinc-binding dehydrogenase JNUCC6_16110 PF03786 D-mannonate dehydratase (UxuA) JNUCC6_16115 PF00106 short chain dehydrogenase JNUCC6_16120 PF07690 Major Facilitator Superfamily JNUCC6_16125 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_16130 PF00294 pfkB family carbohydrate kinase JNUCC6_16135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JNUCC6_16135 PF08666 SAF domain JNUCC6_16140 PF08125 Mannitol dehydrogenase C-terminal domain JNUCC6_16140 PF01232 Mannitol dehydrogenase Rossmann domain JNUCC6_16145 PF00107 Zinc-binding dehydrogenase JNUCC6_16145 PF08240 Alcohol dehydrogenase GroES-like domain JNUCC6_16165 PF02632 BioY family JNUCC6_16170 PF04055 Radical SAM superfamily JNUCC6_16170 PF06968 Biotin and Thiamin Synthesis associated domain JNUCC6_16180 PF01497 Periplasmic binding protein JNUCC6_16185 PF01032 FecCD transport family JNUCC6_16190 PF01032 FecCD transport family JNUCC6_16195 PF00005 ABC transporter JNUCC6_16200 PF00756 Putative esterase JNUCC6_16205 PF02229 Transcriptional Coactivator p15 (PC4) JNUCC6_16210 PF00144 Beta-lactamase JNUCC6_16220 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16225 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16235 PF01380 SIS domain JNUCC6_16240 PF01418 Helix-turn-helix domain, rpiR family JNUCC6_16240 PF01380 SIS domain JNUCC6_16250 PF10672 S-adenosylmethionine-dependent methyltransferase JNUCC6_16250 PF17785 PUA-like domain JNUCC6_16255 PF01266 FAD dependent oxidoreductase JNUCC6_16265 PF00877 NlpC/P60 family JNUCC6_16270 PF03992 Antibiotic biosynthesis monooxygenase JNUCC6_16290 PF01263 Aldose 1-epimerase JNUCC6_16295 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_16295 PF00072 Response regulator receiver domain JNUCC6_16305 PF06628 Catalase-related immune-responsive JNUCC6_16305 PF00199 Catalase JNUCC6_16315 PF02898 Nitric oxide synthase, oxygenase domain JNUCC6_16320 PF07687 Peptidase dimerisation domain JNUCC6_16320 PF01546 Peptidase family M20/M25/M40 JNUCC6_16330 PF07690 Major Facilitator Superfamily JNUCC6_16335 PF04439 Streptomycin adenylyltransferase JNUCC6_16340 PF00324 Amino acid permease JNUCC6_16350 PF00156 Phosphoribosyl transferase domain JNUCC6_16355 PF00860 Permease family JNUCC6_16365 PF01758 Sodium Bile acid symporter family JNUCC6_16375 PF04397 LytTr DNA-binding domain JNUCC6_16375 PF00072 Response regulator receiver domain JNUCC6_16380 PF07694 5TMR of 5TMR-LYT JNUCC6_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_16380 PF06580 Histidine kinase JNUCC6_16385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_16385 PF00005 ABC transporter JNUCC6_16390 PF00005 ABC transporter JNUCC6_16390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_16395 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16400 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_16400 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_16410 PF07969 Amidohydrolase family JNUCC6_16415 PF07969 Amidohydrolase family JNUCC6_16420 PF00892 EamA-like transporter family JNUCC6_16425 PF06908 YspA SLOG family JNUCC6_16435 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16440 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16445 PF00005 ABC transporter JNUCC6_16455 PF00149 Calcineurin-like phosphoesterase JNUCC6_16455 PF02872 5'-nucleotidase, C-terminal domain JNUCC6_16460 PF01047 MarR family JNUCC6_16465 PF08447 PAS fold JNUCC6_16465 PF13426 PAS domain JNUCC6_16465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_16475 PF03466 LysR substrate binding domain JNUCC6_16480 PF00296 Luciferase-like monooxygenase JNUCC6_16485 PF00005 ABC transporter JNUCC6_16490 PF00296 Luciferase-like monooxygenase JNUCC6_16495 PF00462 Glutaredoxin JNUCC6_16500 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_16505 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16510 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_16515 PF00583 Acetyltransferase (GNAT) family JNUCC6_16525 PF01613 Flavin reductase like domain JNUCC6_16550 PF06725 3D domain JNUCC6_16550 PF01476 LysM domain JNUCC6_16555 PF00080 Copper/zinc superoxide dismutase (SODC) JNUCC6_16560 PF03706 Lysylphosphatidylglycerol synthase TM region JNUCC6_16560 PF09924 Uncharacterised conserved protein (DUF2156) JNUCC6_16565 PF00005 ABC transporter JNUCC6_16580 PF01546 Peptidase family M20/M25/M40 JNUCC6_16580 PF07687 Peptidase dimerisation domain JNUCC6_16585 PF03553 Na+/H+ antiporter family JNUCC6_16595 PF13378 Enolase C-terminal domain-like JNUCC6_16595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNUCC6_16605 PF01156 Inosine-uridine preferring nucleoside hydrolase JNUCC6_16620 PF00005 ABC transporter JNUCC6_16625 PF12558 ATP-binding cassette cobalt transporter JNUCC6_16625 PF00005 ABC transporter JNUCC6_16630 PF00294 pfkB family carbohydrate kinase JNUCC6_16635 PF01381 Helix-turn-helix JNUCC6_16650 PF01566 Natural resistance-associated macrophage protein JNUCC6_16680 PF00293 NUDIX domain JNUCC6_16685 PF00313 'Cold-shock' DNA-binding domain JNUCC6_16705 PF05163 DinB family JNUCC6_16710 PF00293 NUDIX domain JNUCC6_16710 PF09297 NADH pyrophosphatase zinc ribbon domain JNUCC6_16725 PF13536 Putative multidrug resistance efflux transporter JNUCC6_16730 PF07687 Peptidase dimerisation domain JNUCC6_16730 PF01546 Peptidase family M20/M25/M40 JNUCC6_16745 PF00881 Nitroreductase family JNUCC6_16750 PF01053 Cys/Met metabolism PLP-dependent enzyme JNUCC6_16755 PF00742 Homoserine dehydrogenase JNUCC6_16755 PF03447 Homoserine dehydrogenase, NAD binding domain JNUCC6_16760 PF12728 Helix-turn-helix domain JNUCC6_16765 PF00892 EamA-like transporter family JNUCC6_16770 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_16770 PF00072 Response regulator receiver domain JNUCC6_16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_16780 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_16790 PF00072 Response regulator receiver domain JNUCC6_16790 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_16795 PF07730 Histidine kinase JNUCC6_16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_16815 PF00149 Calcineurin-like phosphoesterase JNUCC6_16820 PF02673 Bacitracin resistance protein BacA JNUCC6_16825 PF00072 Response regulator receiver domain JNUCC6_16825 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_16830 PF00672 HAMP domain JNUCC6_16830 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_16845 PF02867 Ribonucleotide reductase, barrel domain JNUCC6_16845 PF00317 Ribonucleotide reductase, all-alpha domain JNUCC6_16845 PF03477 ATP cone domain JNUCC6_16850 PF00268 Ribonucleotide reductase, small chain JNUCC6_16855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_16860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JNUCC6_16860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNUCC6_16875 PF00171 Aldehyde dehydrogenase family JNUCC6_16880 PF03435 Saccharopine dehydrogenase NADP binding domain JNUCC6_16880 PF16653 Saccharopine dehydrogenase C-terminal domain JNUCC6_16885 PF00202 Aminotransferase class-III JNUCC6_16890 PF13520 Amino acid permease JNUCC6_16895 PF01470 Pyroglutamyl peptidase JNUCC6_16915 PF02515 CoA-transferase family III JNUCC6_16920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_16920 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_16920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_16925 PF12848 ABC transporter JNUCC6_16925 PF16326 ABC transporter C-terminal domain JNUCC6_16925 PF00005 ABC transporter JNUCC6_16930 PF11738 Protein of unknown function (DUF3298) JNUCC6_16930 PF13739 Deacetylase PdaC JNUCC6_16930 PF01522 Polysaccharide deacetylase JNUCC6_16935 PF06738 Putative threonine/serine exporter JNUCC6_16940 PF06738 Putative threonine/serine exporter JNUCC6_16940 PF12821 Threonine/Serine exporter, ThrE JNUCC6_16945 PF00563 EAL domain JNUCC6_16945 PF03707 Bacterial signalling protein N terminal repeat JNUCC6_16945 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_16950 PF00892 EamA-like transporter family JNUCC6_16955 PF00664 ABC transporter transmembrane region JNUCC6_16955 PF00005 ABC transporter JNUCC6_16960 PF00005 ABC transporter JNUCC6_16960 PF00664 ABC transporter transmembrane region JNUCC6_16975 PF00583 Acetyltransferase (GNAT) family JNUCC6_16980 PF00657 GDSL-like Lipase/Acylhydrolase JNUCC6_16990 PF13538 UvrD-like helicase C-terminal domain JNUCC6_16995 PF03009 Glycerophosphoryl diester phosphodiesterase family JNUCC6_17015 PF02660 Glycerol-3-phosphate acyltransferase JNUCC6_17020 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_17020 PF17158 Membrane-associated sensor, integral membrane domain JNUCC6_17025 PF00881 Nitroreductase family JNUCC6_17030 PF01546 Peptidase family M20/M25/M40 JNUCC6_17030 PF07687 Peptidase dimerisation domain JNUCC6_17035 PF01595 Cyclin M transmembrane N-terminal domain JNUCC6_17035 PF00571 CBS domain JNUCC6_17035 PF03471 Transporter associated domain JNUCC6_17040 PF04542 Sigma-70 region 2 JNUCC6_17040 PF08281 Sigma-70, region 4 JNUCC6_17045 PF01047 MarR family JNUCC6_17050 PF03960 ArsC family JNUCC6_17055 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_17055 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_17060 PF12848 ABC transporter JNUCC6_17060 PF00005 ABC transporter JNUCC6_17075 PF13460 NAD(P)H-binding JNUCC6_17080 PF03358 NADPH-dependent FMN reductase JNUCC6_17085 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_17085 PF13977 BetI-type transcriptional repressor, C-terminal JNUCC6_17090 PF01131 DNA topoisomerase JNUCC6_17090 PF01751 Toprim domain JNUCC6_17100 PF04073 Aminoacyl-tRNA editing domain JNUCC6_17110 PF00155 Aminotransferase class I and II JNUCC6_17115 PF00155 Aminotransferase class I and II JNUCC6_17120 PF00795 Carbon-nitrogen hydrolase JNUCC6_17125 PF00005 ABC transporter JNUCC6_17125 PF09383 NIL domain JNUCC6_17130 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_17135 PF03180 NLPA lipoprotein JNUCC6_17140 PF11799 impB/mucB/samB family C-terminal domain JNUCC6_17140 PF00817 impB/mucB/samB family JNUCC6_17140 PF11798 IMS family HHH motif JNUCC6_17145 PF08863 YolD-like protein JNUCC6_17150 PF06271 RDD family JNUCC6_17160 PF01370 NAD dependent epimerase/dehydratase family JNUCC6_17170 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_17170 PF00501 AMP-binding enzyme JNUCC6_17185 PF01497 Periplasmic binding protein JNUCC6_17190 PF00005 ABC transporter JNUCC6_17190 PF00664 ABC transporter transmembrane region JNUCC6_17195 PF01497 Periplasmic binding protein JNUCC6_17200 PF01497 Periplasmic binding protein JNUCC6_17205 PF00005 ABC transporter JNUCC6_17210 PF01032 FecCD transport family JNUCC6_17215 PF01032 FecCD transport family JNUCC6_17220 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_17230 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_17235 PF00005 ABC transporter JNUCC6_17240 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_17240 PF00585 C-terminal regulatory domain of Threonine dehydratase JNUCC6_17245 PF00580 UvrD/REP helicase N-terminal domain JNUCC6_17245 PF13361 UvrD-like helicase C-terminal domain JNUCC6_17250 PF07670 Nucleoside recognition JNUCC6_17255 PF02585 GlcNAc-PI de-N-acetylase JNUCC6_17260 PF08830 Protein of unknown function (DUF1806) JNUCC6_17265 PF08543 Phosphomethylpyrimidine kinase JNUCC6_17280 PF03167 Uracil DNA glycosylase superfamily JNUCC6_17295 PF04241 Protein of unknown function (DUF423) JNUCC6_17305 PF09671 Spore coat protein (Spore_GerQ) JNUCC6_17310 PF07486 Cell Wall Hydrolase JNUCC6_17315 PF04073 Aminoacyl-tRNA editing domain JNUCC6_17325 PF06778 Chlorite dismutase JNUCC6_17330 PF03099 Biotin/lipoate A/B protein ligase family JNUCC6_17340 PF07293 Protein of unknown function (DUF1450) JNUCC6_17345 PF01966 HD domain JNUCC6_17355 PF01361 Tautomerase enzyme JNUCC6_17360 PF08741 YwhD family JNUCC6_17365 PF00912 Transglycosylase JNUCC6_17365 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_17370 PF00072 Response regulator receiver domain JNUCC6_17370 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_17380 PF05746 DALR anticodon binding domain JNUCC6_17380 PF03485 Arginyl tRNA synthetase N terminal domain JNUCC6_17380 PF00750 tRNA synthetases class I (R) JNUCC6_17385 PF01497 Periplasmic binding protein JNUCC6_17390 PF01032 FecCD transport family JNUCC6_17395 PF00005 ABC transporter JNUCC6_17400 PF03186 CobD/Cbib protein JNUCC6_17405 PF00155 Aminotransferase class I and II JNUCC6_17415 PF02654 Cobalamin-5-phosphate synthase JNUCC6_17420 PF00300 Histidine phosphatase superfamily (branch 1) JNUCC6_17430 PF01923 Cobalamin adenosyltransferase JNUCC6_17445 PF02754 Cysteine-rich domain JNUCC6_17445 PF13183 4Fe-4S dicluster domain JNUCC6_17450 PF00108 Thiolase, N-terminal domain JNUCC6_17450 PF02803 Thiolase, C-terminal domain JNUCC6_17455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JNUCC6_17455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JNUCC6_17460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_17460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_17460 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_17465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_17465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JNUCC6_17465 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_17470 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_17470 PF13977 BetI-type transcriptional repressor, C-terminal JNUCC6_17475 PF01642 Methylmalonyl-CoA mutase JNUCC6_17475 PF02310 B12 binding domain JNUCC6_17480 PF05066 HB1, ASXL, restriction endonuclease HTH domain JNUCC6_17485 PF06418 CTP synthase N-terminus JNUCC6_17485 PF00117 Glutamine amidotransferase class-I JNUCC6_17490 PF10740 Domain of unknown function (DUF2529) JNUCC6_17495 PF00072 Response regulator receiver domain JNUCC6_17500 PF01116 Fructose-bisphosphate aldolase class-II JNUCC6_17505 PF00923 Transaldolase/Fructose-6-phosphate aldolase JNUCC6_17510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNUCC6_17515 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JNUCC6_17520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNUCC6_17520 PF07497 Rho termination factor, RNA-binding domain JNUCC6_17520 PF07498 Rho termination factor, N-terminal domain JNUCC6_17525 PF01197 Ribosomal protein L31 JNUCC6_17530 PF00265 Thymidine kinase JNUCC6_17535 PF01520 N-acetylmuramoyl-L-alanine amidase JNUCC6_17535 PF08239 Bacterial SH3 domain JNUCC6_17540 PF03462 PCRF domain JNUCC6_17540 PF00472 RF-1 domain JNUCC6_17545 PF13847 Methyltransferase domain JNUCC6_17545 PF17827 PrmC N-terminal domain JNUCC6_17550 PF09551 Stage II sporulation protein R (spore_II_R) JNUCC6_17555 PF01300 Telomere recombination JNUCC6_17555 PF03481 Putative GTP-binding controlling metal-binding JNUCC6_17560 PF02659 Putative manganese efflux pump JNUCC6_17565 PF01451 Low molecular weight phosphotyrosine protein phosphatase JNUCC6_17570 PF02743 Cache domain JNUCC6_17570 PF00672 HAMP domain JNUCC6_17570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_17575 PF02502 Ribose/Galactose Isomerase JNUCC6_17580 PF04260 Protein of unknown function (DUF436) JNUCC6_17585 PF00464 Serine hydroxymethyltransferase JNUCC6_17600 PF02350 UDP-N-acetylglucosamine 2-epimerase JNUCC6_17605 PF03899 ATP synthase I chain JNUCC6_17610 PF00119 ATP synthase A chain JNUCC6_17615 PF00137 ATP synthase subunit C JNUCC6_17620 PF00430 ATP synthase B/B' CF(0) JNUCC6_17625 PF00213 ATP synthase delta (OSCP) subunit JNUCC6_17630 PF00306 ATP synthase alpha/beta chain, C terminal domain JNUCC6_17630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNUCC6_17630 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNUCC6_17635 PF00231 ATP synthase JNUCC6_17640 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNUCC6_17640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNUCC6_17645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JNUCC6_17645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JNUCC6_17650 PF06612 Protein of unknown function (DUF1146) JNUCC6_17655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNUCC6_17660 PF08486 Stage II sporulation protein JNUCC6_17670 PF12116 Stage III sporulation protein D JNUCC6_17680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNUCC6_17680 PF00460 Flagella basal body rod protein JNUCC6_17685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNUCC6_17685 PF00460 Flagella basal body rod protein JNUCC6_17695 PF07977 FabA-like domain JNUCC6_17710 PF00436 Single-strand binding protein family JNUCC6_17715 PF12419 SNF2 Helicase protein JNUCC6_17715 PF00271 Helicase conserved C-terminal domain JNUCC6_17715 PF00176 SNF2 family N-terminal domain JNUCC6_17720 PF04434 SWIM zinc finger JNUCC6_17735 PF00669 Bacterial flagellin N-terminal helical region JNUCC6_17735 PF00700 Bacterial flagellin C-terminal helical region JNUCC6_17740 PF00497 Bacterial extracellular solute-binding proteins, family 3 JNUCC6_17745 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_17750 PF00005 ABC transporter JNUCC6_17765 PF00155 Aminotransferase class I and II JNUCC6_17770 PF00534 Glycosyl transferases group 1 JNUCC6_17775 PF01467 Cytidylyltransferase-like JNUCC6_17780 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNUCC6_17785 PF00535 Glycosyl transferase family 2 JNUCC6_17785 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNUCC6_17790 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JNUCC6_17805 PF01061 ABC-2 type transporter JNUCC6_17810 PF00005 ABC transporter JNUCC6_17815 PF00534 Glycosyl transferases group 1 JNUCC6_17845 PF02899 Phage integrase, N-terminal SAM-like domain JNUCC6_17845 PF00589 Phage integrase family JNUCC6_17855 PF00589 Phage integrase family JNUCC6_17855 PF02899 Phage integrase, N-terminal SAM-like domain JNUCC6_17885 PF04542 Sigma-70 region 2 JNUCC6_17885 PF08281 Sigma-70, region 4 JNUCC6_17910 PF00746 LPXTG cell wall anchor motif JNUCC6_17910 PF02225 PA domain JNUCC6_17910 PF00082 Subtilase family JNUCC6_17910 PF06280 Fn3-like domain JNUCC6_17930 PF13180 PDZ domain JNUCC6_17930 PF03572 Peptidase family S41 JNUCC6_17950 PF00005 ABC transporter JNUCC6_17950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_17955 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_17960 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_17960 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_17985 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JNUCC6_17985 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JNUCC6_17990 PF03772 Competence protein JNUCC6_17990 PF00753 Metallo-beta-lactamase superfamily JNUCC6_17990 PF13567 Domain of unknown function (DUF4131) JNUCC6_17995 PF09844 Uncharacterized conserved protein (COG2071) JNUCC6_18005 PF05525 Branched-chain amino acid transport protein JNUCC6_18015 PF00171 Aldehyde dehydrogenase family JNUCC6_18020 PF02954 Bacterial regulatory protein, Fis family JNUCC6_18020 PF00158 Sigma-54 interaction domain JNUCC6_18020 PF13426 PAS domain JNUCC6_18025 PF01619 Proline dehydrogenase JNUCC6_18035 PF05922 Peptidase inhibitor I9 JNUCC6_18035 PF00082 Subtilase family JNUCC6_18060 PF01910 Thiamine-binding protein JNUCC6_18065 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_18070 PF00005 ABC transporter JNUCC6_18075 PF01026 TatD related DNase JNUCC6_18090 PF02743 Cache domain JNUCC6_18090 PF00672 HAMP domain JNUCC6_18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_18150 PF03808 Glycosyl transferase WecB/TagA/CpsF family JNUCC6_18155 PF09587 Bacterial capsule synthesis protein PGA_cap JNUCC6_18160 PF13180 PDZ domain JNUCC6_18165 PF00877 NlpC/P60 family JNUCC6_18165 PF01476 LysM domain JNUCC6_18170 PF01476 LysM domain JNUCC6_18170 PF00877 NlpC/P60 family JNUCC6_18175 PF03816 Cell envelope-related transcriptional attenuator domain JNUCC6_18180 PF06338 ComK protein JNUCC6_18185 PF08281 Sigma-70, region 4 JNUCC6_18185 PF04542 Sigma-70 region 2 JNUCC6_18190 PF00390 Malic enzyme, N-terminal domain JNUCC6_18190 PF03949 Malic enzyme, NAD binding domain JNUCC6_18190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JNUCC6_18195 PF01645 Conserved region in glutamate synthase JNUCC6_18200 PF05525 Branched-chain amino acid transport protein JNUCC6_18205 PF00672 HAMP domain JNUCC6_18205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JNUCC6_18205 PF02743 Cache domain JNUCC6_18210 PF00953 Glycosyl transferase family 4 JNUCC6_18215 PF03816 Cell envelope-related transcriptional attenuator domain JNUCC6_18220 PF09186 Domain of unknown function (DUF1949) JNUCC6_18220 PF01205 Uncharacterized protein family UPF0029 JNUCC6_18225 PF07730 Histidine kinase JNUCC6_18225 PF05384 Sensor protein DegS JNUCC6_18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_18230 PF00072 Response regulator receiver domain JNUCC6_18230 PF00196 Bacterial regulatory proteins, luxR family JNUCC6_18245 PF02645 Uncharacterised protein, DegV family COG1307 JNUCC6_18250 PF04851 Type III restriction enzyme, res subunit JNUCC6_18250 PF00271 Helicase conserved C-terminal domain JNUCC6_18265 PF04316 Anti-sigma-28 factor, FlgM JNUCC6_18275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNUCC6_18275 PF00460 Flagella basal body rod protein JNUCC6_18280 PF00669 Bacterial flagellin N-terminal helical region JNUCC6_18290 PF02623 FliW protein JNUCC6_18295 PF02599 Global regulator protein family JNUCC6_18300 PF00700 Bacterial flagellin C-terminal helical region JNUCC6_18300 PF00669 Bacterial flagellin N-terminal helical region JNUCC6_18315 PF02719 Polysaccharide biosynthesis protein JNUCC6_18320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JNUCC6_18325 PF02348 Cytidylyltransferase JNUCC6_18330 PF02348 Cytidylyltransferase JNUCC6_18345 PF01593 Flavin containing amine oxidoreductase JNUCC6_18350 PF08666 SAF domain JNUCC6_18350 PF03102 NeuB family JNUCC6_18360 PF00669 Bacterial flagellin N-terminal helical region JNUCC6_18360 PF00700 Bacterial flagellin C-terminal helical region JNUCC6_18365 PF03646 FlaG protein JNUCC6_18370 PF02465 Flagellar hook-associated protein 2 N-terminus JNUCC6_18370 PF07195 Flagellar hook-associated protein 2 C-terminus JNUCC6_18375 PF02561 Flagellar protein FliS JNUCC6_18390 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JNUCC6_18390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JNUCC6_18395 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_18395 PF03707 Bacterial signalling protein N terminal repeat JNUCC6_18395 PF00563 EAL domain JNUCC6_18400 PF07517 SecA DEAD-like domain JNUCC6_18400 PF01043 SecA preprotein cross-linking domain JNUCC6_18400 PF07516 SecA Wing and Scaffold domain JNUCC6_18400 PF02810 SEC-C motif JNUCC6_18425 PF04851 Type III restriction enzyme, res subunit JNUCC6_18425 PF00271 Helicase conserved C-terminal domain JNUCC6_18425 PF17757 UvrB interaction domain JNUCC6_18425 PF12344 Ultra-violet resistance protein B JNUCC6_18425 PF02151 UvrB/uvrC motif JNUCC6_18430 PF17760 UvrA interaction domain JNUCC6_18430 PF00005 ABC transporter JNUCC6_18430 PF17755 UvrA DNA-binding domain JNUCC6_18435 PF13349 Putative adhesin JNUCC6_18440 PF00005 ABC transporter JNUCC6_18445 PF02687 FtsX-like permease family JNUCC6_18445 PF18075 FtsX extracellular domain JNUCC6_18450 PF00877 NlpC/P60 family JNUCC6_18460 PF00578 AhpC/TSA family JNUCC6_18465 PF17820 PDZ domain JNUCC6_18465 PF03572 Peptidase family S41 JNUCC6_18465 PF01471 Putative peptidoglycan binding domain JNUCC6_18470 PF17820 PDZ domain JNUCC6_18475 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) JNUCC6_18485 PF03591 AzlC protein JNUCC6_18490 PF07883 Cupin domain JNUCC6_18490 PF01381 Helix-turn-helix JNUCC6_18495 PF09335 SNARE associated Golgi protein JNUCC6_18500 PF12705 PD-(D/E)XK nuclease superfamily JNUCC6_18505 PF00580 UvrD/REP helicase N-terminal domain JNUCC6_18505 PF13361 UvrD-like helicase C-terminal domain JNUCC6_18505 PF12705 PD-(D/E)XK nuclease superfamily JNUCC6_18510 PF04235 Protein of unknown function (DUF418) JNUCC6_18515 PF01557 Fumarylacetoacetate (FAA) hydrolase family JNUCC6_18520 PF07457 Protein of unknown function (DUF1516) JNUCC6_18525 PF00128 Alpha amylase, catalytic domain JNUCC6_18530 PF02645 Uncharacterised protein, DegV family COG1307 JNUCC6_18540 PF00326 Prolyl oligopeptidase family JNUCC6_18545 PF01883 Iron-sulfur cluster assembly protein JNUCC6_18550 PF00027 Cyclic nucleotide-binding domain JNUCC6_18550 PF00325 Bacterial regulatory proteins, crp family JNUCC6_18555 PF07724 AAA domain (Cdc48 subfamily) JNUCC6_18555 PF17871 AAA lid domain JNUCC6_18555 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_18555 PF02861 Clp amino terminal domain, pathogenicity island component JNUCC6_18555 PF10431 C-terminal, D2-small domain, of ClpB protein JNUCC6_18565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JNUCC6_18565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JNUCC6_18570 PF02801 Beta-ketoacyl synthase, C-terminal domain JNUCC6_18570 PF00109 Beta-ketoacyl synthase, N-terminal domain JNUCC6_18575 PF00579 tRNA synthetases class I (W and Y) JNUCC6_18585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_18590 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_18595 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_18595 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_18600 PF00005 ABC transporter JNUCC6_18600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_18605 PF00005 ABC transporter JNUCC6_18605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_18610 PF03960 ArsC family JNUCC6_18615 PF05389 Negative regulator of genetic competence (MecA) JNUCC6_18620 PF06054 Competence protein CoiA-like family JNUCC6_18625 PF01432 Peptidase family M3 JNUCC6_18625 PF08439 Oligopeptidase F JNUCC6_18635 PF01152 Bacterial-like globin JNUCC6_18640 PF01464 Transglycosylase SLT domain JNUCC6_18645 PF01928 CYTH domain JNUCC6_18655 PF04607 Region found in RelA / SpoT proteins JNUCC6_18660 PF01513 ATP-NAD kinase JNUCC6_18665 PF00849 RNA pseudouridylate synthase JNUCC6_18670 PF00571 CBS domain JNUCC6_18670 PF01769 Divalent cation transporter JNUCC6_18670 PF03448 MgtE intracellular N domain JNUCC6_18680 PF10612 Spore coat protein Z JNUCC6_18690 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JNUCC6_18695 PF07451 Stage V sporulation protein AD (SpoVAD) JNUCC6_18700 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JNUCC6_18710 PF14069 Stage VI sporulation protein F JNUCC6_18720 PF13673 Acetyltransferase (GNAT) domain JNUCC6_18730 PF00756 Putative esterase JNUCC6_18735 PF04608 Phosphatidylglycerophosphatase A JNUCC6_18740 PF00565 Staphylococcal nuclease homologue JNUCC6_18745 PF13508 Acetyltransferase (GNAT) domain JNUCC6_18755 PF00300 Histidine phosphatase superfamily (branch 1) JNUCC6_18760 PF01865 Protein of unknown function DUF47 JNUCC6_18765 PF01384 Phosphate transporter family JNUCC6_18770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_18780 PF00005 ABC transporter JNUCC6_18790 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain JNUCC6_18790 PF01113 Dihydrodipicolinate reductase, N-terminus JNUCC6_18800 PF01546 Peptidase family M20/M25/M40 JNUCC6_18800 PF07687 Peptidase dimerisation domain JNUCC6_18805 PF00682 HMGL-like JNUCC6_18805 PF08502 LeuA allosteric (dimerisation) domain JNUCC6_18810 PF00583 Acetyltransferase (GNAT) family JNUCC6_18820 PF02016 LD-carboxypeptidase N-terminal domain JNUCC6_18820 PF17676 LD-carboxypeptidase C-terminal domain JNUCC6_18825 PF00155 Aminotransferase class I and II JNUCC6_18825 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_18845 PF13091 PLD-like domain JNUCC6_18845 PF13396 Phospholipase_D-nuclease N-terminal JNUCC6_18860 PF08757 CotH kinase protein JNUCC6_18885 PF01061 ABC-2 type transporter JNUCC6_18895 PF00171 Aldehyde dehydrogenase family JNUCC6_18900 PF00989 PAS fold JNUCC6_18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_18900 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_18905 PF05343 M42 glutamyl aminopeptidase JNUCC6_18910 PF08245 Mur ligase middle domain JNUCC6_18910 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_18910 PF01225 Mur ligase family, catalytic domain JNUCC6_18915 PF01476 LysM domain JNUCC6_18915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNUCC6_18920 PF00009 Elongation factor Tu GTP binding domain JNUCC6_18920 PF16658 Class II release factor RF3, C-terminal domain JNUCC6_18920 PF03144 Elongation factor Tu domain 2 JNUCC6_18925 PF00873 AcrB/AcrD/AcrF family JNUCC6_18930 PF00550 Phosphopantetheine attachment site JNUCC6_18930 PF07993 Male sterility protein JNUCC6_18935 PF03741 Integral membrane protein TerC family JNUCC6_18940 PF02386 Cation transport protein JNUCC6_18950 PF00989 PAS fold JNUCC6_18950 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_18950 PF13426 PAS domain JNUCC6_18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_18950 PF13188 PAS domain JNUCC6_18955 PF01047 MarR family JNUCC6_18965 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JNUCC6_18980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JNUCC6_18980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JNUCC6_18985 PF11700 Vacuole effluxer Atg22 like JNUCC6_18990 PF01584 CheW-like domain JNUCC6_18990 PF00072 Response regulator receiver domain JNUCC6_18995 PF14177 YkyB-like protein JNUCC6_19000 PF02541 Ppx/GppA phosphatase family JNUCC6_19005 PF02503 Polyphosphate kinase middle domain JNUCC6_19005 PF13089 Polyphosphate kinase N-terminal domain JNUCC6_19005 PF13090 Polyphosphate kinase C-terminal domain 2 JNUCC6_19005 PF17941 Polyphosphate kinase C-terminal domain 1 JNUCC6_19010 PF00563 EAL domain JNUCC6_19010 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_19010 PF03707 Bacterial signalling protein N terminal repeat JNUCC6_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_19030 PF03466 LysR substrate binding domain JNUCC6_19035 PF14602 Hexapeptide repeat of succinyl-transferase JNUCC6_19035 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JNUCC6_19035 PF00132 Bacterial transferase hexapeptide (six repeats) JNUCC6_19040 PF01546 Peptidase family M20/M25/M40 JNUCC6_19040 PF07687 Peptidase dimerisation domain JNUCC6_19050 PF00005 ABC transporter JNUCC6_19065 PF17863 AAA lid domain JNUCC6_19065 PF07726 ATPase family associated with various cellular activities (AAA) JNUCC6_19085 PF07690 Major Facilitator Superfamily JNUCC6_19090 PF13416 Bacterial extracellular solute-binding protein JNUCC6_19095 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_19100 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_19105 PF08402 TOBE domain JNUCC6_19105 PF00005 ABC transporter JNUCC6_19110 PF01381 Helix-turn-helix JNUCC6_19115 PF04397 LytTr DNA-binding domain JNUCC6_19120 PF00463 Isocitrate lyase family JNUCC6_19125 PF01274 Malate synthase JNUCC6_19140 PF00578 AhpC/TSA family JNUCC6_19140 PF10417 C-terminal domain of 1-Cys peroxiredoxin JNUCC6_19145 PF00578 AhpC/TSA family JNUCC6_19150 PF02254 TrkA-N domain JNUCC6_19150 PF02080 TrkA-C domain JNUCC6_19155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNUCC6_19155 PF17770 Ribonuclease J C-terminal domain JNUCC6_19155 PF00753 Metallo-beta-lactamase superfamily JNUCC6_19160 PF07288 Protein of unknown function (DUF1447) JNUCC6_19170 PF01327 Polypeptide deformylase JNUCC6_19175 PF00676 Dehydrogenase E1 component JNUCC6_19180 PF02779 Transketolase, pyrimidine binding domain JNUCC6_19180 PF02780 Transketolase, C-terminal domain JNUCC6_19185 PF02817 e3 binding domain JNUCC6_19185 PF00364 Biotin-requiring enzyme JNUCC6_19185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JNUCC6_19190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JNUCC6_19190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JNUCC6_19200 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JNUCC6_19205 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNUCC6_19210 PF00510 Cytochrome c oxidase subunit III JNUCC6_19215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JNUCC6_19220 PF00440 Bacterial regulatory proteins, tetR family JNUCC6_19225 PF00873 AcrB/AcrD/AcrF family JNUCC6_19230 PF03788 LrgA family JNUCC6_19235 PF04172 LrgB-like family JNUCC6_19240 PF03060 Nitronate monooxygenase JNUCC6_19245 PF05256 Uncharacterised protein family (UPF0223) JNUCC6_19250 PF06335 Protein of unknown function (DUF1054) JNUCC6_19260 PF00459 Inositol monophosphatase family JNUCC6_19270 PF00679 Elongation factor G C-terminus JNUCC6_19270 PF03144 Elongation factor Tu domain 2 JNUCC6_19270 PF00009 Elongation factor Tu GTP binding domain JNUCC6_19270 PF14492 Elongation Factor G, domain II JNUCC6_19275 PF14036 YlaH-like protein JNUCC6_19280 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JNUCC6_19290 PF07408 Protein of unknown function (DUF1507) JNUCC6_19295 PF01098 Cell cycle protein JNUCC6_19300 PF02436 Conserved carboxylase domain JNUCC6_19300 PF02785 Biotin carboxylase C-terminal domain JNUCC6_19300 PF00682 HMGL-like JNUCC6_19300 PF00364 Biotin-requiring enzyme JNUCC6_19300 PF00289 Biotin carboxylase, N-terminal domain JNUCC6_19300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNUCC6_19305 PF02628 Cytochrome oxidase assembly protein JNUCC6_19310 PF01040 UbiA prenyltransferase family JNUCC6_19315 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JNUCC6_19315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JNUCC6_19315 PF00034 Cytochrome c JNUCC6_19320 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNUCC6_19325 PF00510 Cytochrome c oxidase subunit III JNUCC6_19330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JNUCC6_19335 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JNUCC6_19340 PF04238 Protein of unknown function (DUF420) JNUCC6_19345 PF01594 AI-2E family transporter JNUCC6_19350 PF08868 YugN-like family JNUCC6_19355 PF00188 Cysteine-rich secretory protein family JNUCC6_19355 PF14504 CAP-associated N-terminal JNUCC6_19360 PF13840 ACT domain JNUCC6_19360 PF00696 Amino acid kinase family JNUCC6_19365 PF08245 Mur ligase middle domain JNUCC6_19365 PF01225 Mur ligase family, catalytic domain JNUCC6_19365 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_19370 PF01810 LysE type translocator JNUCC6_19375 PF07690 Major Facilitator Superfamily JNUCC6_19380 PF10942 Protein of unknown function (DUF2619) JNUCC6_19385 PF06133 Control of competence regulator ComK, YlbF/YmcA JNUCC6_19390 PF03009 Glycerophosphoryl diester phosphodiesterase family JNUCC6_19395 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JNUCC6_19415 PF01467 Cytidylyltransferase-like JNUCC6_19425 PF13180 PDZ domain JNUCC6_19425 PF05362 Lon protease (S16) C-terminal proteolytic domain JNUCC6_19430 PF05636 HIGH Nucleotidyl Transferase JNUCC6_19440 PF01783 Ribosomal L32p protein family JNUCC6_19445 PF00378 Enoyl-CoA hydratase/isomerase JNUCC6_19455 PF00289 Biotin carboxylase, N-terminal domain JNUCC6_19455 PF02785 Biotin carboxylase C-terminal domain JNUCC6_19455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNUCC6_19460 PF00364 Biotin-requiring enzyme JNUCC6_19465 PF01039 Carboxyl transferase domain JNUCC6_19470 PF02558 Ketopantoate reductase PanE/ApbA JNUCC6_19470 PF08546 Ketopantoate reductase PanE/ApbA C terminal JNUCC6_19480 PF10079 Bacillithiol biosynthesis BshC JNUCC6_19485 PF02381 MraZ protein, putative antitoxin-like JNUCC6_19490 PF01795 MraW methylase family JNUCC6_19500 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_19500 PF03717 Penicillin-binding Protein dimerisation domain JNUCC6_19500 PF03793 PASTA domain JNUCC6_19505 PF03793 PASTA domain JNUCC6_19505 PF03717 Penicillin-binding Protein dimerisation domain JNUCC6_19505 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_19510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JNUCC6_19510 PF00953 Glycosyl transferase family 4 JNUCC6_19515 PF08245 Mur ligase middle domain JNUCC6_19515 PF02875 Mur ligase family, glutamate ligase domain JNUCC6_19520 PF01098 Cell cycle protein JNUCC6_19525 PF08478 POTRA domain, FtsQ-type JNUCC6_19525 PF03799 Cell division protein FtsQ JNUCC6_19530 PF05949 Bacterial protein of unknown function (DUF881) JNUCC6_19535 PF05949 Bacterial protein of unknown function (DUF881) JNUCC6_19540 PF06947 Protein of unknown function (DUF1290) JNUCC6_19545 PF02491 SHS2 domain inserted in FTSA JNUCC6_19550 PF12327 FtsZ family, C-terminal domain JNUCC6_19550 PF00091 Tubulin/FtsZ family, GTPase domain JNUCC6_19560 PF04545 Sigma-70, region 4 JNUCC6_19560 PF04542 Sigma-70 region 2 JNUCC6_19565 PF04542 Sigma-70 region 2 JNUCC6_19565 PF04539 Sigma-70 region 3 JNUCC6_19565 PF04545 Sigma-70, region 4 JNUCC6_19575 PF01168 Alanine racemase, N-terminal domain JNUCC6_19580 PF04472 Cell division protein SepF JNUCC6_19585 PF02325 YGGT family JNUCC6_19590 PF17774 Putative RNA-binding domain in YlmH JNUCC6_19590 PF01479 S4 domain JNUCC6_19595 PF05103 DivIVA protein JNUCC6_19600 PF08264 Anticodon-binding domain of tRNA JNUCC6_19600 PF00133 tRNA synthetases class I (I, L, M and V) JNUCC6_19600 PF06827 Zinc finger found in FPG and IleRS JNUCC6_19605 PF01252 Signal peptidase (SPase) II JNUCC6_19610 PF01479 S4 domain JNUCC6_19610 PF00849 RNA pseudouridylate synthase JNUCC6_19615 PF00156 Phosphoribosyl transferase domain JNUCC6_19620 PF00860 Permease family JNUCC6_19625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JNUCC6_19625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JNUCC6_19630 PF01979 Amidohydrolase family JNUCC6_19635 PF00117 Glutamine amidotransferase class-I JNUCC6_19635 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JNUCC6_19640 PF02142 MGS-like domain JNUCC6_19640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JNUCC6_19640 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JNUCC6_19645 PF00970 Oxidoreductase FAD-binding domain JNUCC6_19645 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JNUCC6_19650 PF01180 Dihydroorotate dehydrogenase JNUCC6_19655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JNUCC6_19660 PF00156 Phosphoribosyl transferase domain JNUCC6_19665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JNUCC6_19670 PF05670 NFACT protein RNA binding domain JNUCC6_19675 PF03755 YicC-like family, N-terminal region JNUCC6_19675 PF08340 Domain of unknown function (DUF1732) JNUCC6_19680 PF00625 Guanylate kinase JNUCC6_19685 PF01192 RNA polymerase Rpb6 JNUCC6_19690 PF02441 Flavoprotein JNUCC6_19690 PF04127 DNA / pantothenate metabolism flavoprotein JNUCC6_19695 PF00271 Helicase conserved C-terminal domain JNUCC6_19695 PF17764 3′ DNA-binding domain (3′BD) JNUCC6_19695 PF18074 Primosomal protein N C-terminal domain JNUCC6_19695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JNUCC6_19695 PF04851 Type III restriction enzyme, res subunit JNUCC6_19700 PF01327 Polypeptide deformylase JNUCC6_19705 PF02911 Formyl transferase, C-terminal domain JNUCC6_19705 PF00551 Formyl transferase JNUCC6_19710 PF01029 NusB family JNUCC6_19710 PF01189 16S rRNA methyltransferase RsmB/F JNUCC6_19715 PF04055 Radical SAM superfamily JNUCC6_19725 PF03793 PASTA domain JNUCC6_19725 PF00069 Protein kinase domain JNUCC6_19730 PF03193 RsgA GTPase JNUCC6_19730 PF16745 RsgA N-terminal domain JNUCC6_19735 PF00834 Ribulose-phosphate 3 epimerase family JNUCC6_19740 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JNUCC6_19740 PF04263 Thiamin pyrophosphokinase, catalytic domain JNUCC6_19750 PF00830 Ribosomal L28 family JNUCC6_19755 PF03780 Asp23 family, cell envelope-related function JNUCC6_19760 PF02734 DAK2 domain JNUCC6_19760 PF13684 Dihydroxyacetone kinase family JNUCC6_19765 PF03315 Serine dehydratase beta chain JNUCC6_19765 PF01842 ACT domain JNUCC6_19770 PF03313 Serine dehydratase alpha chain JNUCC6_19775 PF00271 Helicase conserved C-terminal domain JNUCC6_19775 PF17191 RecG wedge domain JNUCC6_19775 PF00270 DEAD/DEAH box helicase JNUCC6_19785 PF02504 Fatty acid synthesis protein JNUCC6_19790 PF00698 Acyl transferase domain JNUCC6_19800 PF00550 Phosphopantetheine attachment site JNUCC6_19805 PF00035 Double-stranded RNA binding motif JNUCC6_19805 PF14622 Ribonuclease-III-like JNUCC6_19810 PF06470 SMC proteins Flexible Hinge Domain JNUCC6_19810 PF02463 RecF/RecN/SMC N terminal domain JNUCC6_19815 PF02881 SRP54-type protein, helical bundle domain JNUCC6_19815 PF00448 SRP54-type protein, GTPase domain JNUCC6_19820 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JNUCC6_19825 PF02978 Signal peptide binding domain JNUCC6_19825 PF02881 SRP54-type protein, helical bundle domain JNUCC6_19825 PF00448 SRP54-type protein, GTPase domain JNUCC6_19830 PF00886 Ribosomal protein S16 JNUCC6_19840 PF05239 PRC-barrel domain JNUCC6_19840 PF01782 RimM N-terminal domain JNUCC6_19845 PF01746 tRNA (Guanine-1)-methyltransferase JNUCC6_19850 PF01245 Ribosomal protein L19 JNUCC6_19855 PF10502 Signal peptidase, peptidase S26 JNUCC6_19860 PF01926 50S ribosome-binding GTPase JNUCC6_19865 PF01351 Ribonuclease HII JNUCC6_19875 PF01312 FlhB HrpN YscU SpaS Family JNUCC6_19880 PF08442 ATP-grasp domain JNUCC6_19880 PF00549 CoA-ligase JNUCC6_19885 PF00549 CoA-ligase JNUCC6_19885 PF02629 CoA binding domain JNUCC6_19890 PF02481 DNA recombination-mediator protein A JNUCC6_19895 PF01131 DNA topoisomerase JNUCC6_19895 PF01751 Toprim domain JNUCC6_19895 PF01396 Topoisomerase DNA binding C4 zinc finger JNUCC6_19900 PF01134 Glucose inhibited division protein A JNUCC6_19905 PF00589 Phage integrase family JNUCC6_19905 PF02899 Phage integrase, N-terminal SAM-like domain JNUCC6_19910 PF00227 Proteasome subunit JNUCC6_19915 PF10431 C-terminal, D2-small domain, of ClpB protein JNUCC6_19915 PF07724 AAA domain (Cdc48 subfamily) JNUCC6_19915 PF00004 ATPase family associated with various cellular activities (AAA) JNUCC6_19920 PF08222 CodY helix-turn-helix domain JNUCC6_19920 PF06018 CodY GAF-like domain JNUCC6_19925 PF00460 Flagella basal body rod protein JNUCC6_19930 PF00460 Flagella basal body rod protein JNUCC6_19930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNUCC6_19935 PF02049 Flagellar hook-basal body complex protein FliE JNUCC6_19940 PF01514 Secretory protein of YscJ/FliF family JNUCC6_19940 PF08345 Flagellar M-ring protein C-terminal JNUCC6_19945 PF01706 FliG C-terminal domain JNUCC6_19945 PF14842 FliG N-terminal domain JNUCC6_19945 PF14841 FliG middle domain JNUCC6_19955 PF18269 T3SS EscN ATPase C-terminal domain JNUCC6_19955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JNUCC6_19955 PF02874 ATP synthase alpha/beta family, beta-barrel domain JNUCC6_19960 PF02050 Flagellar FliJ protein JNUCC6_19975 PF03963 Flagellar hook capping protein - N-terminal region JNUCC6_19985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JNUCC6_19985 PF00460 Flagella basal body rod protein JNUCC6_19990 PF06289 Flagellar and Swarming motility proteins JNUCC6_20000 PF02154 Flagellar motor switch protein FliM JNUCC6_20000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNUCC6_20005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JNUCC6_20005 PF04509 CheC-like family JNUCC6_20010 PF00072 Response regulator receiver domain JNUCC6_20015 PF04347 Flagellar biosynthesis protein, FliO JNUCC6_20020 PF00813 FliP family JNUCC6_20025 PF01313 Bacterial export proteins, family 3 JNUCC6_20030 PF01311 Bacterial export proteins, family 1 JNUCC6_20035 PF01312 FlhB HrpN YscU SpaS Family JNUCC6_20040 PF00771 FHIPEP family JNUCC6_20045 PF00448 SRP54-type protein, GTPase domain JNUCC6_20050 PF10609 NUBPL iron-transfer P-loop NTPase JNUCC6_20055 PF00072 Response regulator receiver domain JNUCC6_20055 PF01339 CheB methylesterase JNUCC6_20060 PF01584 CheW-like domain JNUCC6_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_20060 PF01627 Hpt domain JNUCC6_20060 PF07194 P2 response regulator binding domain JNUCC6_20060 PF02895 Signal transducing histidine kinase, homodimeric domain JNUCC6_20065 PF01584 CheW-like domain JNUCC6_20070 PF04509 CheC-like family JNUCC6_20075 PF03975 CheD chemotactic sensory transduction JNUCC6_20085 PF04542 Sigma-70 region 2 JNUCC6_20085 PF04539 Sigma-70 region 3 JNUCC6_20085 PF04545 Sigma-70, region 4 JNUCC6_20100 PF00318 Ribosomal protein S2 JNUCC6_20105 PF00889 Elongation factor TS JNUCC6_20110 PF00696 Amino acid kinase family JNUCC6_20115 PF01765 Ribosome recycling factor JNUCC6_20120 PF01255 Putative undecaprenyl diphosphate synthase JNUCC6_20130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JNUCC6_20130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JNUCC6_20130 PF13288 DXP reductoisomerase C-terminal domain JNUCC6_20135 PF02163 Peptidase family M50 JNUCC6_20135 PF13180 PDZ domain JNUCC6_20140 PF03129 Anticodon binding domain JNUCC6_20140 PF04073 Aminoacyl-tRNA editing domain JNUCC6_20140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_20145 PF00929 Exonuclease JNUCC6_20145 PF02811 PHP domain JNUCC6_20145 PF14579 Helix-hairpin-helix motif JNUCC6_20145 PF07733 Bacterial DNA polymerase III alpha NTPase domain JNUCC6_20145 PF11490 DNA polymerase III polC-type N-terminus II JNUCC6_20145 PF14480 DNA polymerase III polC-type N-terminus I JNUCC6_20145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JNUCC6_20150 PF17384 RimP C-terminal SH3 domain JNUCC6_20150 PF02576 RimP N-terminal domain JNUCC6_20155 PF08529 NusA N-terminal domain JNUCC6_20155 PF13184 NusA-like KH domain JNUCC6_20155 PF00575 S1 RNA binding domain JNUCC6_20160 PF04296 Protein of unknown function (DUF448) JNUCC6_20165 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JNUCC6_20170 PF04760 Translation initiation factor IF-2, N-terminal region JNUCC6_20170 PF11987 Translation-initiation factor 2 JNUCC6_20170 PF00009 Elongation factor Tu GTP binding domain JNUCC6_20175 PF04456 Protein of unknown function (DUF503) JNUCC6_20180 PF02033 Ribosome-binding factor A JNUCC6_20185 PF01509 TruB family pseudouridylate synthase (N terminal domain) JNUCC6_20185 PF16198 tRNA pseudouridylate synthase B C-terminal domain JNUCC6_20190 PF01687 Riboflavin kinase JNUCC6_20190 PF06574 FAD synthetase JNUCC6_20195 PF00312 Ribosomal protein S15 JNUCC6_20200 PF00575 S1 RNA binding domain JNUCC6_20200 PF03725 3' exoribonuclease family, domain 2 JNUCC6_20200 PF01138 3' exoribonuclease family, domain 1 JNUCC6_20200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JNUCC6_20200 PF00013 KH domain JNUCC6_20205 PF00675 Insulinase (Peptidase family M16) JNUCC6_20205 PF05193 Peptidase M16 inactive domain JNUCC6_20220 PF02441 Flavoprotein JNUCC6_20225 PF01118 Semialdehyde dehydrogenase, NAD binding domain JNUCC6_20225 PF02774 Semialdehyde dehydrogenase, dimerisation domain JNUCC6_20230 PF00701 Dihydrodipicolinate synthetase family JNUCC6_20235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JNUCC6_20235 PF17770 Ribonuclease J C-terminal domain JNUCC6_20235 PF00753 Metallo-beta-lactamase superfamily JNUCC6_20240 PF01580 FtsK/SpoIIIE family JNUCC6_20240 PF09397 Ftsk gamma domain JNUCC6_20240 PF17854 FtsK alpha domain JNUCC6_20245 PF00392 Bacterial regulatory proteins, gntR family JNUCC6_20245 PF07702 UTRA domain JNUCC6_20250 PF02608 ABC transporter substrate-binding protein PnrA-like JNUCC6_20255 PF00005 ABC transporter JNUCC6_20260 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_20265 PF02653 Branched-chain amino acid transport system / permease component JNUCC6_20270 PF05193 Peptidase M16 inactive domain JNUCC6_20275 PF05193 Peptidase M16 inactive domain JNUCC6_20275 PF00675 Insulinase (Peptidase family M16) JNUCC6_20285 PF11588 Protein of unknown function (DUF3243) JNUCC6_20290 PF11868 Protein of unknown function (DUF3388) JNUCC6_20295 PF13464 Domain of unknown function (DUF4115) JNUCC6_20300 PF01066 CDP-alcohol phosphatidyltransferase JNUCC6_20305 PF00994 Probable molybdopterin binding domain JNUCC6_20305 PF18146 Damage-inducible protein CinA KH domain JNUCC6_20305 PF02464 Competence-damaged protein JNUCC6_20310 PF00154 recA bacterial DNA recombination protein JNUCC6_20315 PF01966 HD domain JNUCC6_20315 PF12072 Domain of unknown function (DUF3552) JNUCC6_20315 PF00013 KH domain JNUCC6_20320 PF13277 YmdB-like protein JNUCC6_20325 PF04232 Stage V sporulation protein S (SpoVS) JNUCC6_20330 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JNUCC6_20330 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JNUCC6_20330 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JNUCC6_20335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JNUCC6_20340 PF00919 Uncharacterized protein family UPF0004 JNUCC6_20340 PF04055 Radical SAM superfamily JNUCC6_20340 PF01938 TRAM domain JNUCC6_20345 PF06133 Control of competence regulator ComK, YlbF/YmcA JNUCC6_20350 PF10628 Outer spore coat protein E (CotE) JNUCC6_20355 PF00488 MutS domain V JNUCC6_20355 PF05190 MutS family domain IV JNUCC6_20355 PF05192 MutS domain III JNUCC6_20355 PF01624 MutS domain I JNUCC6_20355 PF05188 MutS domain II JNUCC6_20360 PF01119 DNA mismatch repair protein, C-terminal domain JNUCC6_20360 PF08676 MutL C terminal dimerisation domain JNUCC6_20365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JNUCC6_20365 PF01266 FAD dependent oxidoreductase JNUCC6_20380 PF17209 Hfq protein JNUCC6_20385 PF00581 Rhodanese-like domain JNUCC6_20390 PF03458 UPF0126 domain JNUCC6_20395 PF06838 Methionine gamma-lyase JNUCC6_20400 PF13411 MerR HTH family regulatory protein JNUCC6_20405 PF00120 Glutamine synthetase, catalytic domain JNUCC6_20405 PF03951 Glutamine synthetase, beta-Grasp domain JNUCC6_20410 PF00589 Phage integrase family JNUCC6_20410 PF14659 Phage integrase, N-terminal SAM-like domain JNUCC6_20415 PF06114 IrrE N-terminal-like domain JNUCC6_20475 PF09588 YqaJ-like viral recombinase domain JNUCC6_20485 PF03837 RecT family JNUCC6_20495 PF01695 IstB-like ATP binding protein JNUCC6_20510 PF05866 Endodeoxyribonuclease RusA JNUCC6_20680 PF13457 GW (Gly-Tryp) dipeptide domain JNUCC6_20680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNUCC6_20690 PF02976 DNA mismatch repair enzyme MutH JNUCC6_20710 PF00717 Peptidase S24-like JNUCC6_20710 PF01726 LexA DNA binding domain JNUCC6_20720 PF00239 Resolvase, N terminal domain JNUCC6_20725 PF05979 Bacterial protein of unknown function (DUF896) JNUCC6_20730 PF02779 Transketolase, pyrimidine binding domain JNUCC6_20730 PF00456 Transketolase, thiamine diphosphate binding domain JNUCC6_20730 PF02780 Transketolase, C-terminal domain JNUCC6_20740 PF03672 Uncharacterised protein family (UPF0154) JNUCC6_20745 PF12146 Serine aminopeptidase, S33 JNUCC6_20750 PF00682 HMGL-like JNUCC6_20755 PF02803 Thiolase, C-terminal domain JNUCC6_20755 PF00108 Thiolase, N-terminal domain JNUCC6_20770 PF00248 Aldo/keto reductase family JNUCC6_20775 PF00293 NUDIX domain JNUCC6_20785 PF01475 Ferric uptake regulator family JNUCC6_20790 PF02899 Phage integrase, N-terminal SAM-like domain JNUCC6_20790 PF00589 Phage integrase family JNUCC6_20795 PF01676 Metalloenzyme superfamily JNUCC6_20800 PF02885 Glycosyl transferase family, helical bundle domain JNUCC6_20800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JNUCC6_20800 PF00591 Glycosyl transferase family, a/b domain JNUCC6_20805 PF00171 Aldehyde dehydrogenase family JNUCC6_20810 PF01740 STAS domain JNUCC6_20815 PF13581 Histidine kinase-like ATPase domain JNUCC6_20820 PF04545 Sigma-70, region 4 JNUCC6_20820 PF04542 Sigma-70 region 2 JNUCC6_20820 PF04539 Sigma-70 region 3 JNUCC6_20825 PF03323 Bacillus/Clostridium GerA spore germination protein JNUCC6_20830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JNUCC6_20830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JNUCC6_20835 PF00583 Acetyltransferase (GNAT) family JNUCC6_20840 PF03745 Domain of unknown function (DUF309) JNUCC6_20845 PF02616 Segregation and condensation protein ScpA JNUCC6_20850 PF04079 Segregation and condensation complex subunit ScpB JNUCC6_20855 PF07943 Penicillin-binding protein 5, C-terminal domain JNUCC6_20855 PF00768 D-alanyl-D-alanine carboxypeptidase JNUCC6_20860 PF01479 S4 domain JNUCC6_20860 PF00849 RNA pseudouridylate synthase JNUCC6_20865 PF00578 AhpC/TSA family JNUCC6_20870 PF05140 ResB-like family JNUCC6_20875 PF01578 Cytochrome C assembly protein JNUCC6_20880 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_20880 PF00072 Response regulator receiver domain JNUCC6_20885 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_20885 PF18698 Histidine kinase sensor domain JNUCC6_20885 PF00989 PAS fold JNUCC6_20885 PF00672 HAMP domain JNUCC6_20885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_20890 PF12822 ECF transporter, substrate-specific component JNUCC6_20900 PF17773 UPF0176 acylphosphatase like domain JNUCC6_20900 PF00581 Rhodanese-like domain JNUCC6_20900 PF12368 Rhodanase C-terminal JNUCC6_20910 PF03466 LysR substrate binding domain JNUCC6_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JNUCC6_20915 PF12146 Serine aminopeptidase, S33 JNUCC6_20930 PF01476 LysM domain JNUCC6_20930 PF08239 Bacterial SH3 domain JNUCC6_20930 PF00877 NlpC/P60 family JNUCC6_20940 PF03848 Tellurite resistance protein TehB JNUCC6_20940 PF09313 Domain of unknown function (DUF1971) JNUCC6_20945 PF03806 AbgT putative transporter family JNUCC6_20950 PF07687 Peptidase dimerisation domain JNUCC6_20950 PF01546 Peptidase family M20/M25/M40 JNUCC6_20955 PF17853 GGDEF-like domain JNUCC6_20955 PF13556 PucR C-terminal helix-turn-helix domain JNUCC6_20955 PF05651 Putative sugar diacid recognition JNUCC6_20965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_20970 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_20975 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_20975 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_20980 PF00005 ABC transporter JNUCC6_20980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_20985 PF00005 ABC transporter JNUCC6_20985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_21005 PF03060 Nitronate monooxygenase JNUCC6_21010 PF00376 MerR family regulatory protein JNUCC6_21010 PF09278 MerR, DNA binding JNUCC6_21015 PF13193 AMP-binding enzyme C-terminal domain JNUCC6_21015 PF00501 AMP-binding enzyme JNUCC6_21020 PF18158 Adaptive response protein AidB N-terminal domain JNUCC6_21020 PF02770 Acyl-CoA dehydrogenase, middle domain JNUCC6_21020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JNUCC6_21035 PF13649 Methyltransferase domain JNUCC6_21060 PF13732 Domain of unknown function (DUF4162) JNUCC6_21060 PF00005 ABC transporter JNUCC6_21065 PF12679 ABC-2 family transporter protein JNUCC6_21110 PF14493 Helix-turn-helix domain JNUCC6_21115 PF00271 Helicase conserved C-terminal domain JNUCC6_21115 PF00270 DEAD/DEAH box helicase JNUCC6_21120 PF01476 LysM domain JNUCC6_21120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JNUCC6_21135 PF01810 LysE type translocator JNUCC6_21145 PF00710 Asparaginase, N-terminal JNUCC6_21145 PF17763 Glutaminase/Asparaginase C-terminal domain JNUCC6_21150 PF17763 Glutaminase/Asparaginase C-terminal domain JNUCC6_21150 PF00710 Asparaginase, N-terminal JNUCC6_21155 PF13419 Haloacid dehalogenase-like hydrolase JNUCC6_21160 PF00156 Phosphoribosyl transferase domain JNUCC6_21165 PF17782 DprA winged helix domain JNUCC6_21165 PF02481 DNA recombination-mediator protein A JNUCC6_21185 PF13367 PrsW family intramembrane metalloprotease JNUCC6_21190 PF01471 Putative peptidoglycan binding domain JNUCC6_21190 PF07486 Cell Wall Hydrolase JNUCC6_21195 PF03413 Peptidase propeptide and YPEB domain JNUCC6_21195 PF14620 YpeB sporulation JNUCC6_21205 PF02224 Cytidylate kinase JNUCC6_21210 PF01553 Acyltransferase JNUCC6_21215 PF00575 S1 RNA binding domain JNUCC6_21220 PF01926 50S ribosome-binding GTPase JNUCC6_21220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JNUCC6_21225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JNUCC6_21225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JNUCC6_21240 PF09547 Stage IV sporulation protein A (spore_IV_A) JNUCC6_21245 PF00216 Bacterial DNA-binding protein JNUCC6_21250 PF01227 GTP cyclohydrolase I JNUCC6_21255 PF02081 Tryptophan RNA-binding attenuator protein JNUCC6_21260 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JNUCC6_21265 PF01209 ubiE/COQ5 methyltransferase family JNUCC6_21270 PF00348 Polyprenyl synthetase JNUCC6_21275 PF00334 Nucleoside diphosphate kinase JNUCC6_21280 PF03705 CheR methyltransferase, all-alpha domain JNUCC6_21280 PF01739 CheR methyltransferase, SAM binding domain JNUCC6_21285 PF01264 Chorismate synthase JNUCC6_21290 PF01761 3-dehydroquinate synthase JNUCC6_21295 PF07736 Chorismate mutase type I JNUCC6_21300 PF00155 Aminotransferase class I and II JNUCC6_21305 PF02153 Prephenate dehydrogenase JNUCC6_21305 PF01842 ACT domain JNUCC6_21310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JNUCC6_21320 PF08858 IDEAL domain JNUCC6_21320 PF08864 UPF0302 domain JNUCC6_21325 PF10673 Protein of unknown function (DUF2487) JNUCC6_21330 PF00355 Rieske [2Fe-2S] domain JNUCC6_21335 PF00033 Cytochrome b/b6/petB JNUCC6_21340 PF00032 Cytochrome b(C-terminal)/b6/petD JNUCC6_21340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JNUCC6_21345 PF07187 Protein of unknown function (DUF1405) JNUCC6_21350 PF04298 Putative neutral zinc metallopeptidase JNUCC6_21355 PF00877 NlpC/P60 family JNUCC6_21355 PF01476 LysM domain JNUCC6_21360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_21360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_21365 PF03819 MazG nucleotide pyrophosphohydrolase domain JNUCC6_21370 PF05173 Dihydrodipicolinate reductase, C-terminus JNUCC6_21370 PF01113 Dihydrodipicolinate reductase, N-terminus JNUCC6_21375 PF02142 MGS-like domain JNUCC6_21380 PF13439 Glycosyltransferase Family 4 JNUCC6_21380 PF00534 Glycosyl transferases group 1 JNUCC6_21385 PF01743 Poly A polymerase head domain JNUCC6_21385 PF12627 Probable RNA and SrmB- binding site of polymerase A JNUCC6_21385 PF13735 tRNA nucleotidyltransferase domain 2 putative JNUCC6_21395 PF08279 HTH domain JNUCC6_21395 PF03099 Biotin/lipoate A/B protein ligase family JNUCC6_21395 PF02237 Biotin protein ligase C terminal domain JNUCC6_21400 PF02548 Ketopantoate hydroxymethyltransferase JNUCC6_21405 PF02569 Pantoate-beta-alanine ligase JNUCC6_21410 PF02261 Aspartate decarboxylase JNUCC6_21415 PF00929 Exonuclease JNUCC6_21415 PF04851 Type III restriction enzyme, res subunit JNUCC6_21415 PF13307 Helicase C-terminal domain JNUCC6_21430 PF00155 Aminotransferase class I and II JNUCC6_21435 PF00152 tRNA synthetases class II (D, K and N) JNUCC6_21435 PF01336 OB-fold nucleic acid binding domain JNUCC6_21440 PF07261 Replication initiation and membrane attachment JNUCC6_21445 PF10576 Iron-sulfur binding domain of endonuclease III JNUCC6_21445 PF00730 HhH-GPD superfamily base excision DNA repair protein JNUCC6_21445 PF00633 Helix-hairpin-helix motif JNUCC6_21455 PF00905 Penicillin binding protein transpeptidase domain JNUCC6_21455 PF00912 Transglycosylase JNUCC6_21460 PF03838 Recombination protein U JNUCC6_21475 PF00271 Helicase conserved C-terminal domain JNUCC6_21475 PF00270 DEAD/DEAH box helicase JNUCC6_21475 PF09369 Domain of unknown function (DUF1998) JNUCC6_21480 PF13482 RNase_H superfamily JNUCC6_21485 PF05103 DivIVA protein JNUCC6_21495 PF00563 EAL domain JNUCC6_21495 PF00990 Diguanylate cyclase, GGDEF domain JNUCC6_21495 PF03707 Bacterial signalling protein N terminal repeat JNUCC6_21500 PF01170 Putative RNA methylase family UPF0020 JNUCC6_21500 PF02926 THUMP domain JNUCC6_21510 PF13307 Helicase C-terminal domain JNUCC6_21520 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JNUCC6_21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_21530 PF00072 Response regulator receiver domain JNUCC6_21530 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_21530 PF09308 LuxQ, periplasmic JNUCC6_21535 PF03705 CheR methyltransferase, all-alpha domain JNUCC6_21535 PF01739 CheR methyltransferase, SAM binding domain JNUCC6_21540 PF13426 PAS domain JNUCC6_21540 PF07228 Stage II sporulation protein E (SpoIIE) JNUCC6_21545 PF00115 Cytochrome C and Quinol oxidase polypeptide I JNUCC6_21550 PF09125 Cytochrome C oxidase subunit II, transmembrane JNUCC6_21550 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JNUCC6_21560 PF00350 Dynamin family JNUCC6_21565 PF00581 Rhodanese-like domain JNUCC6_21570 PF03741 Integral membrane protein TerC family JNUCC6_21575 PF02397 Bacterial sugar transferase JNUCC6_21580 PF13614 AAA domain JNUCC6_21595 PF13439 Glycosyltransferase Family 4 JNUCC6_21595 PF00534 Glycosyl transferases group 1 JNUCC6_21620 PF16363 GDP-mannose 4,6 dehydratase JNUCC6_21625 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_21625 PF00072 Response regulator receiver domain JNUCC6_21630 PF00072 Response regulator receiver domain JNUCC6_21630 PF09456 RcsC Alpha-Beta-Loop (ABL) JNUCC6_21630 PF00512 His Kinase A (phospho-acceptor) domain JNUCC6_21630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_21640 PF01259 SAICAR synthetase JNUCC6_21645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JNUCC6_21645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JNUCC6_21650 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JNUCC6_21655 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_21660 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_21665 PF11954 Domain of unknown function (DUF3471) JNUCC6_21665 PF00144 Beta-lactamase JNUCC6_21685 PF07969 Amidohydrolase family JNUCC6_21690 PF03630 Fumble JNUCC6_21705 PF01047 MarR family JNUCC6_21710 PF07690 Major Facilitator Superfamily JNUCC6_21715 PF13456 Reverse transcriptase-like JNUCC6_21720 PF10782 Zinc-finger JNUCC6_21725 PF00696 Amino acid kinase family JNUCC6_21725 PF13840 ACT domain JNUCC6_21730 PF03471 Transporter associated domain JNUCC6_21730 PF01595 Cyclin M transmembrane N-terminal domain JNUCC6_21730 PF00571 CBS domain JNUCC6_21735 PF00313 'Cold-shock' DNA-binding domain JNUCC6_21745 PF01207 Dihydrouridine synthase (Dus) JNUCC6_21760 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_21765 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_21775 PF00356 Bacterial regulatory proteins, lacI family JNUCC6_21785 PF04854 Protein of unknown function, DUF624 JNUCC6_21790 PF02311 AraC-like ligand binding domain JNUCC6_21790 PF12833 Helix-turn-helix domain JNUCC6_21795 PF11975 Family 4 glycosyl hydrolase C-terminal domain JNUCC6_21795 PF02056 Family 4 glycosyl hydrolase JNUCC6_21800 PF01268 Formate--tetrahydrofolate ligase JNUCC6_21805 PF13649 Methyltransferase domain JNUCC6_21810 PF00291 Pyridoxal-phosphate dependent enzyme JNUCC6_21815 PF01053 Cys/Met metabolism PLP-dependent enzyme JNUCC6_21820 PF01966 HD domain JNUCC6_21825 PF12848 ABC transporter JNUCC6_21825 PF16326 ABC transporter C-terminal domain JNUCC6_21825 PF00005 ABC transporter JNUCC6_21830 PF13769 Virulence factor JNUCC6_21830 PF08712 Scaffold protein Nfu/NifU N terminal JNUCC6_21855 PF00294 pfkB family carbohydrate kinase JNUCC6_21865 PF01471 Putative peptidoglycan binding domain JNUCC6_21865 PF01510 N-acetylmuramoyl-L-alanine amidase JNUCC6_21885 PF00563 EAL domain JNUCC6_21885 PF10388 EAL-domain associated signalling protein domain JNUCC6_21895 PF01207 Dihydrouridine synthase (Dus) JNUCC6_21910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JNUCC6_21960 PF02687 FtsX-like permease family JNUCC6_21965 PF00005 ABC transporter JNUCC6_21970 PF00486 Transcriptional regulatory protein, C terminal JNUCC6_21970 PF00072 Response regulator receiver domain JNUCC6_21975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JNUCC6_21980 PF00488 MutS domain V JNUCC6_21980 PF01713 Smr domain JNUCC6_22000 PF06445 GyrI-like small molecule binding domain JNUCC6_22000 PF13411 MerR HTH family regulatory protein JNUCC6_22005 PF02517 CPBP intramembrane metalloprotease JNUCC6_22020 PF02627 Carboxymuconolactone decarboxylase family JNUCC6_22030 PF07070 SpoOM protein JNUCC6_22040 PF00324 Amino acid permease JNUCC6_22045 PF01979 Amidohydrolase family JNUCC6_22050 PF13404 AsnC-type helix-turn-helix domain JNUCC6_22050 PF01037 Lrp/AsnC ligand binding domain JNUCC6_22055 PF04951 D-aminopeptidase JNUCC6_22060 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_22065 PF12911 N-terminal TM domain of oligopeptide transport permease C JNUCC6_22065 PF00528 Binding-protein-dependent transport system inner membrane component JNUCC6_22070 PF00005 ABC transporter JNUCC6_22070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_22075 PF00005 ABC transporter JNUCC6_22075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JNUCC6_22080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JNUCC6_22095 PF07687 Peptidase dimerisation domain JNUCC6_22095 PF01546 Peptidase family M20/M25/M40 JNUCC6_22100 PF01773 Na+ dependent nucleoside transporter N-terminus JNUCC6_22100 PF07662 Na+ dependent nucleoside transporter C-terminus JNUCC6_22105 PF12787 EcsC protein family JNUCC6_22120 PF16491 CAAX prenyl protease N-terminal, five membrane helices JNUCC6_22120 PF01435 Peptidase family M48 JNUCC6_22125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JNUCC6_22125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JNUCC6_22140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JNUCC6_22140 PF13378 Enolase C-terminal domain-like JNUCC6_22150 PF00144 Beta-lactamase JNUCC6_22150 PF11954 Domain of unknown function (DUF3471) JNUCC6_22155 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JNUCC6_22160 PF02872 5'-nucleotidase, C-terminal domain JNUCC6_22160 PF00149 Calcineurin-like phosphoesterase JNUCC6_22165 PF07690 Major Facilitator Superfamily JNUCC6_22170 PF00300 Histidine phosphatase superfamily (branch 1) JNUCC6_22180 PF00248 Aldo/keto reductase family JNUCC6_22185 PF07690 Major Facilitator Superfamily JNUCC6_22190 PF01638 HxlR-like helix-turn-helix JNUCC6_22200 PF00156 Phosphoribosyl transferase domain JNUCC6_22205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JNUCC6_22205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JNUCC6_22205 PF02824 TGS domain JNUCC6_22205 PF03129 Anticodon binding domain