locus-tag	class	description
JNUCC6_00030	COG0494	nUDIX hydrolase
JNUCC6_00035	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JNUCC6_00045	COG0747	negative chemotaxis
JNUCC6_00050	COG0601	transmembrane transport
JNUCC6_00055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_00060	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_00065	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_00070	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_00075	COG0697	spore germination
JNUCC6_00090	COG3340	Belongs to the peptidase S51 family
JNUCC6_00130	COG1794	racemase activity, acting on amino acids and derivatives
JNUCC6_00170	COG0427	acetyl-CoA hydrolase
JNUCC6_00185	COG1309	transcriptional regulator
JNUCC6_00190	COG2814	Major facilitator Superfamily
JNUCC6_00200	COG1136	(ABC) transporter
JNUCC6_00200	COG0577	efflux transmembrane transporter activity
JNUCC6_00205	COG1136	(ABC) transporter
JNUCC6_00210	COG0745	RESPONSE REGULATOR receiver
JNUCC6_00215	COG5002	protein histidine kinase activity
JNUCC6_00245	COG2521	methyltransferase
JNUCC6_00245	COG2136	Putative SAM-dependent methyltransferase
JNUCC6_00275	COG1272	protein, Hemolysin III
JNUCC6_00280	COG1307	EDD domain protein, DegV family
JNUCC6_00285	COG2755	lipolytic protein G-D-S-L family
JNUCC6_00295	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNUCC6_00300	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNUCC6_00315	COG0626	cystathionine gamma-synthase activity
JNUCC6_00320	COG0626	cystathionine gamma-synthase activity
JNUCC6_00330	COG5278	phosphoserine phosphatase activity
JNUCC6_00330	COG0840	transmembrane signaling receptor activity
JNUCC6_00340	COG0813	purine-nucleoside phosphorylase activity
JNUCC6_00360	COG1917	Cupin 2, conserved barrel domain protein
JNUCC6_00360	COG2207	Transcriptional regulator
JNUCC6_00370	COG0793	Belongs to the peptidase S41A family
JNUCC6_00370	COG3409	Peptidoglycan-binding domain 1 protein
JNUCC6_00380	COG2340	Cysteine-rich secretory protein family
JNUCC6_00385	COG0697	spore germination
JNUCC6_00400	COG0534	Mate efflux family protein
JNUCC6_00410	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNUCC6_00420	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JNUCC6_00425	COG3300	MHYT domain
JNUCC6_00425	COG5001	Diguanylate cyclase
JNUCC6_00430	COG0745	RESPONSE REGULATOR receiver
JNUCC6_00435	COG5002	protein histidine kinase activity
JNUCC6_00440	COG0567	Dehydrogenase, E1 component
JNUCC6_00445	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNUCC6_00455	COG0840	transmembrane signaling receptor activity
JNUCC6_00465	COG2340	Cysteine-rich secretory protein family
JNUCC6_00470	COG1119	ATPase activity
JNUCC6_00490	COG4335	DNA alkylation repair
JNUCC6_00495	COG3706	GGDEF domain
JNUCC6_00520	COG0765	amino acid transport
JNUCC6_00550	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JNUCC6_00555	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JNUCC6_00580	COG0840	transmembrane signaling receptor activity
JNUCC6_00590	COG3942	CHAP domain
JNUCC6_00590	COG1705	Flagellar rod assembly protein muramidase FlgJ
JNUCC6_00595	COG0697	spore germination
JNUCC6_00610	COG0583	DNA-binding transcription factor activity
JNUCC6_00620	COG0768	penicillin binding
JNUCC6_00640	COG1653	transport
JNUCC6_00650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_00660	COG2390	Transcriptional regulator
JNUCC6_00695	COG2814	Major facilitator Superfamily
JNUCC6_00715	COG0833	amino acid
JNUCC6_00720	COG4187	Peptidase family M20/M25/M40
JNUCC6_00755	COG0477	Major facilitator Superfamily
JNUCC6_00765	COG0840	transmembrane signaling receptor activity
JNUCC6_00780	COG0583	DNA-binding transcription factor activity
JNUCC6_00805	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNUCC6_00810	COG0473	3-isopropylmalate dehydrogenase activity
JNUCC6_00820	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_00825	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_00830	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_00835	COG3191	aminopeptidase activity
JNUCC6_00840	COG0747	negative chemotaxis
JNUCC6_00850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_00860	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_00865	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JNUCC6_00890	COG1846	Transcriptional regulator
JNUCC6_00895	COG2814	Major facilitator Superfamily
JNUCC6_00900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JNUCC6_00945	COG0514	ATP-dependent DNA helicase (RecQ)
JNUCC6_00955	COG0747	negative chemotaxis
JNUCC6_00960	COG0601	transmembrane transport
JNUCC6_00965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_00970	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_00975	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_00985	COG0673	inositol 2-dehydrogenase activity
JNUCC6_00990	COG3623	hexulose-6-phosphate isomerase
JNUCC6_00995	COG1940	carbohydrate kinase activity
JNUCC6_00995	COG1846	Transcriptional regulator
JNUCC6_01010	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNUCC6_01020	COG0714	Associated with various cellular activities
JNUCC6_01025	COG4548	von Willebrand factor, type A
JNUCC6_01035	COG1609	Transcriptional regulator
JNUCC6_01055	COG0667	Aldo Keto reductase
JNUCC6_01060	COG0667	Aldo Keto reductase
JNUCC6_01080	COG0745	RESPONSE REGULATOR receiver
JNUCC6_01085	COG2205	protein histidine kinase activity
JNUCC6_01090	COG1131	(ABC) transporter
JNUCC6_01115	COG0154	amidase activity
JNUCC6_01125	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JNUCC6_01130	COG4895	conserved protein (DUF2196)
JNUCC6_01135	COG0642	Histidine kinase
JNUCC6_01140	COG0745	RESPONSE REGULATOR receiver
JNUCC6_01145	COG0596	Alpha beta hydrolase
JNUCC6_01155	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNUCC6_01160	COG1846	Transcriptional regulator
JNUCC6_01160	COG0456	acetyltransferase
JNUCC6_01175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_01180	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_01185	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_01190	COG0006	proline dipeptidase activity
JNUCC6_01200	COG1136	(ABC) transporter
JNUCC6_01225	COG0477	Major facilitator Superfamily
JNUCC6_01230	COG1279	arginine transmembrane transporter activity
JNUCC6_01235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_01255	COG0706	membrane insertase activity
JNUCC6_01265	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JNUCC6_01270	COG1683	Conserved Protein
JNUCC6_01275	COG4473	ABC transporter
JNUCC6_01280	COG3853	Toxic anion resistance protein (TelA)
JNUCC6_01285	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JNUCC6_01290	COG0840	transmembrane signaling receptor activity
JNUCC6_01300	COG1278	Cold shock
JNUCC6_01310	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JNUCC6_01315	COG3483	tryptophan 2,3-dioxygenase activity
JNUCC6_01320	COG3844	kynureninase activity
JNUCC6_01365	COG1846	Transcriptional regulator
JNUCC6_01385	COG1011	Hydrolase
JNUCC6_01395	COG2801	Transposase and inactivated derivatives
JNUCC6_01400	COG0488	(ABC) transporter
JNUCC6_01405	COG1063	alcohol dehydrogenase
JNUCC6_01410	COG1024	Enoyl-CoA hydratase
JNUCC6_01420	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNUCC6_01430	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_01435	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JNUCC6_01450	COG0517	IMP dehydrogenase activity
JNUCC6_01450	COG4175	Glycine betaine
JNUCC6_01475	COG3655	Transcriptional regulator
JNUCC6_01485	COG2272	Belongs to the type-B carboxylesterase lipase family
JNUCC6_01500	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_01505	COG1169	isochorismate synthase
JNUCC6_01510	COG1021	2,3-dihydroxybenzoate-AMP ligase
JNUCC6_01515	COG1535	isochorismatase
JNUCC6_01515	COG3433	isochorismatase activity
JNUCC6_01520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNUCC6_01525	COG3251	PFAM MbtH domain protein
JNUCC6_01530	COG0477	Major facilitator Superfamily
JNUCC6_01540	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JNUCC6_01545	COG2207	Transcriptional regulator
JNUCC6_01545	COG0662	Cupin 2, conserved barrel domain protein
JNUCC6_01565	COG0004	ammonium transporteR
JNUCC6_01580	COG0813	purine-nucleoside phosphorylase activity
JNUCC6_01590	COG2188	Transcriptional regulator
JNUCC6_01600	COG1988	membrane-bound metal-dependent
JNUCC6_01610	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JNUCC6_01625	COG0745	RESPONSE REGULATOR receiver
JNUCC6_01645	COG2252	PERMEase
JNUCC6_01675	COG1476	TRANSCRIPTIONal
JNUCC6_01685	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JNUCC6_01690	COG4585	Histidine kinase
JNUCC6_01695	COG2197	response regulator
JNUCC6_01700	COG0596	Alpha beta hydrolase
JNUCC6_01710	COG0592	DNA-directed DNA polymerase activity
JNUCC6_01725	COG1752	Esterase of the alpha-beta hydrolase superfamily
JNUCC6_01735	COG1876	peptidase activity
JNUCC6_01740	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JNUCC6_01810	COG2814	Major facilitator Superfamily
JNUCC6_01840	COG1511	domain protein
JNUCC6_01885	COG1647	Serine aminopeptidase, S33
JNUCC6_01895	COG1595	DNA-templated transcription, initiation
JNUCC6_01905	COG2207	Transcriptional regulator
JNUCC6_01960	COG0657	acetylesterase activity
JNUCC6_01965	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_01975	COG2135	peptidase activity
JNUCC6_02000	COG3285	dna ligase
JNUCC6_02000	COG1793	dna ligase
JNUCC6_02020	COG0438	transferase activity, transferring glycosyl groups
JNUCC6_02030	COG1215	transferase activity, transferring glycosyl groups
JNUCC6_02040	COG1682	transport, permease protein
JNUCC6_02045	COG1134	teichoic acid transport
JNUCC6_02050	COG0596	Alpha beta hydrolase
JNUCC6_02065	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JNUCC6_02070	COG1496	oxidoreductase activity
JNUCC6_02075	COG1309	transcriptional regulator
JNUCC6_02080	COG0477	Major facilitator Superfamily
JNUCC6_02085	COG4191	Histidine kinase
JNUCC6_02095	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JNUCC6_02105	COG2188	Transcriptional regulator
JNUCC6_02115	COG4821	SIS domain
JNUCC6_02135	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JNUCC6_02150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_02155	COG0765	amino acid transport
JNUCC6_02160	COG1126	abc transporter atp-binding protein
JNUCC6_02170	COG0312	modulator of DNA gyrase
JNUCC6_02175	COG0312	modulator of DNA gyrase
JNUCC6_02185	COG0657	acetylesterase activity
JNUCC6_02195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_02200	COG0406	alpha-ribazole phosphatase activity
JNUCC6_02205	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JNUCC6_02225	COG1653	transport
JNUCC6_02275	COG1609	Transcriptional regulator
JNUCC6_02280	COG0673	inositol 2-dehydrogenase activity
JNUCC6_02285	COG4209	transmembrane transport
JNUCC6_02290	COG0395	ABC-type sugar transport system, permease component
JNUCC6_02295	COG1653	transport
JNUCC6_02305	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JNUCC6_02310	COG2188	Transcriptional regulator
JNUCC6_02320	COG1105	Belongs to the carbohydrate kinase PfkB family
JNUCC6_02325	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JNUCC6_02330	COG1940	carbohydrate kinase activity
JNUCC6_02340	COG3842	ATPase activity
JNUCC6_02345	COG2508	Transcriptional regulator
JNUCC6_02355	COG0803	Belongs to the bacterial solute-binding protein 9 family
JNUCC6_02360	COG1121	(ABC) transporter
JNUCC6_02365	COG1321	iron dependent repressor
JNUCC6_02365	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNUCC6_02370	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNUCC6_02380	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNUCC6_02390	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_02395	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JNUCC6_02405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_02410	COG0765	amino acid transport
JNUCC6_02415	COG1126	abc transporter atp-binding protein
JNUCC6_02420	COG4187	Peptidase family M20/M25/M40
JNUCC6_02425	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_02430	COG1288	antiporter activity
JNUCC6_02435	COG1473	amidohydrolase
JNUCC6_02445	COG0697	spore germination
JNUCC6_02470	COG0500	methyltransferase
JNUCC6_02480	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JNUCC6_02490	COG0628	permease
JNUCC6_02495	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JNUCC6_02500	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JNUCC6_02525	COG0436	Aminotransferase
JNUCC6_02530	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JNUCC6_02540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNUCC6_02565	COG1309	transcriptional regulator
JNUCC6_02590	COG0310	cobalt ion transport
JNUCC6_02620	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
JNUCC6_02670	COG1492	cobalamin metabolic process
JNUCC6_02680	COG1505	serine-type exopeptidase activity
JNUCC6_02695	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_02700	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_02705	COG0534	Mate efflux family protein
JNUCC6_02710	COG1396	sequence-specific DNA binding
JNUCC6_02715	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_02720	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_02725	COG4166	transmembrane transport
JNUCC6_02730	COG0601	transmembrane transport
JNUCC6_02735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_02755	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNUCC6_02760	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JNUCC6_02765	COG0134	indole-3-glycerol-phosphate synthase activity
JNUCC6_02770	COG0135	phosphoribosylanthranilate isomerase activity
JNUCC6_02775	COG0133	tryptophan synthase activity
JNUCC6_02780	COG0159	tryptophan synthase activity
JNUCC6_02795	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNUCC6_02800	COG3162	membrane
JNUCC6_02805	COG0534	Mate efflux family protein
JNUCC6_02810	COG0456	acetyltransferase
JNUCC6_02815	COG4978	Transcriptional regulator
JNUCC6_02815	COG0789	Transcriptional regulator
JNUCC6_02830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_02840	COG4974	Belongs to the 'phage' integrase family
JNUCC6_02845	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_02850	COG3706	GGDEF domain
JNUCC6_02850	COG4251	negative regulation of phosphorylation
JNUCC6_02850	COG2203	Gaf domain
JNUCC6_02850	COG5001	Diguanylate cyclase
JNUCC6_02855	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JNUCC6_02860	COG0454	-acetyltransferase
JNUCC6_02865	COG1984	allophanate hydrolase subunit 2
JNUCC6_02870	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JNUCC6_02875	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JNUCC6_02880	COG1914	H( )-stimulated, divalent metal cation uptake system
JNUCC6_02885	COG4336	lyase activity
JNUCC6_02895	COG4145	pantothenate transmembrane transporter activity
JNUCC6_02930	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
JNUCC6_02935	COG1404	Belongs to the peptidase S8 family
JNUCC6_02955	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNUCC6_02960	COG0512	Glutamine amidotransferase of anthranilate synthase
JNUCC6_02985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_02990	COG3858	chitin binding
JNUCC6_02990	COG1388	LysM domain
JNUCC6_03005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNUCC6_03020	COG2816	NAD+ diphosphatase activity
JNUCC6_03025	COG2226	methyltransferase
JNUCC6_03040	COG1316	TRANSCRIPTIONal
JNUCC6_03045	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JNUCC6_03065	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JNUCC6_03075	COG1695	Transcriptional regulator
JNUCC6_03080	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNUCC6_03105	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_03120	COG0456	acetyltransferase
JNUCC6_03140	COG1357	PFAM Pentapeptide repeats (8 copies)
JNUCC6_03145	COG0494	nUDIX hydrolase
JNUCC6_03160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_03185	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNUCC6_03195	COG1120	ATPase activity
JNUCC6_03200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_03230	COG1309	transcriptional regulator
JNUCC6_03235	COG0604	alcohol dehydrogenase
JNUCC6_03280	COG0640	Transcriptional regulator
JNUCC6_03305	COG2318	DinB family
JNUCC6_03315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_03325	COG2814	Major facilitator Superfamily
JNUCC6_03345	COG0456	acetyltransferase
JNUCC6_03360	COG1737	Transcriptional regulator
JNUCC6_03370	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JNUCC6_03375	COG0395	ABC-type sugar transport system, permease component
JNUCC6_03380	COG1175	transmembrane transport
JNUCC6_03385	COG1653	transport
JNUCC6_03395	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNUCC6_03445	COG0456	acetyltransferase
JNUCC6_03460	COG1846	Transcriptional regulator
JNUCC6_03465	COG0778	Nitroreductase
JNUCC6_03470	COG2140	Oxalate decarboxylase
JNUCC6_03495	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
JNUCC6_03500	COG1461	Dihydroxyacetone kinase
JNUCC6_03505	COG2376	Dihydroxyacetone kinase
JNUCC6_03525	COG3290	protein histidine kinase activity
JNUCC6_03530	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JNUCC6_03535	COG1301	dicarboxylic acid transport
JNUCC6_03540	COG1301	dicarboxylic acid transport
JNUCC6_03545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNUCC6_03585	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNUCC6_03590	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNUCC6_03595	COG1780	Probably involved in ribonucleotide reductase function
JNUCC6_03640	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNUCC6_03645	COG0187	DNA topoisomerase II activity
JNUCC6_03650	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JNUCC6_03655	COG4841	protein insertion into membrane
JNUCC6_03665	COG0824	Thioesterase
JNUCC6_03675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JNUCC6_03680	COG1556	Lactate utilization protein
JNUCC6_03685	COG1139	Iron-sulfur cluster binding protein
JNUCC6_03690	COG0247	lactate metabolic process
JNUCC6_03695	COG2186	Transcriptional regulator
JNUCC6_03705	COG2076	Multidrug Resistance protein
JNUCC6_03710	COG2076	Multidrug Resistance protein
JNUCC6_03720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_03725	COG0066	3-isopropylmalate dehydratase activity
JNUCC6_03750	COG0440	acetolactate synthase activity
JNUCC6_03755	COG0028	Belongs to the TPP enzyme family
JNUCC6_03760	COG0129	dihydroxy-acid dehydratase activity
JNUCC6_03780	COG1335	isochorismatase
JNUCC6_03800	COG0477	Major facilitator Superfamily
JNUCC6_03805	COG1970	mechanosensitive ion channel activity
JNUCC6_03810	COG1999	signal sequence binding
JNUCC6_03835	COG4846	Membrane protein involved in cytochrome C biogenesis
JNUCC6_03840	COG2201	protein-glutamate methylesterase activity
JNUCC6_03845	COG0785	Cytochrome C biogenesis protein
JNUCC6_03855	COG1132	(ABC) transporter
JNUCC6_03860	COG1132	(ABC) transporter
JNUCC6_03890	COG0165	Argininosuccinate lyase
JNUCC6_03900	COG0300	oxidoreductase activity
JNUCC6_03905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_03910	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNUCC6_03915	COG1216	Glycosyl transferase, family 2
JNUCC6_03935	COG0456	acetyltransferase
JNUCC6_03940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_03975	COG0189	ligase activity
JNUCC6_03990	COG0546	phosphoglycolate phosphatase activity
JNUCC6_04000	COG0346	lactoylglutathione lyase activity
JNUCC6_04025	COG1720	tRNA m6t6A37 methyltransferase activity
JNUCC6_04030	COG1619	proteins homologs of microcin C7 resistance protein MccF
JNUCC6_04040	COG3655	Transcriptional regulator
JNUCC6_04100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_04105	COG2808	Putative FMN-binding domain
JNUCC6_04110	COG0456	acetyltransferase
JNUCC6_04115	COG1846	Transcriptional regulator
JNUCC6_04155	COG1078	dGTPase activity
JNUCC6_04170	COG1595	DNA-templated transcription, initiation
JNUCC6_04185	COG2378	regulation of single-species biofilm formation
JNUCC6_04220	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_04225	COG2610	gluconate transmembrane transporter activity
JNUCC6_04230	COG0583	DNA-binding transcription factor activity
JNUCC6_04245	COG1902	pentaerythritol trinitrate reductase activity
JNUCC6_04265	COG0402	S-adenosylhomocysteine deaminase activity
JNUCC6_04270	COG0402	S-adenosylhomocysteine deaminase activity
JNUCC6_04275	COG0583	DNA-binding transcription factor activity
JNUCC6_04320	COG0384	phenazine biosynthesis protein PhzF
JNUCC6_04330	COG0583	DNA-binding transcription factor activity
JNUCC6_04335	COG2814	Major facilitator Superfamily
JNUCC6_04350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNUCC6_04370	COG0024	Methionine aminopeptidase
JNUCC6_04375	COG1902	pentaerythritol trinitrate reductase activity
JNUCC6_04380	COG0419	ATPase involved in DNA repair
JNUCC6_04385	COG0420	3'-5' exonuclease activity
JNUCC6_04395	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNUCC6_04400	COG1122	ATPase activity
JNUCC6_04405	COG1122	ATPase activity
JNUCC6_04410	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_04420	COG2030	dehydratase
JNUCC6_04430	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_04435	COG1268	BioY protein
JNUCC6_04440	COG0733	neurotransmitter:sodium symporter activity
JNUCC6_04445	COG2814	Major facilitator Superfamily
JNUCC6_04450	COG1024	Enoyl-CoA hydratase
JNUCC6_04470	COG0584	glycerophosphoryl diester phosphodiesterase
JNUCC6_04495	COG1131	(ABC) transporter
JNUCC6_04500	COG0789	Transcriptional regulator
JNUCC6_04535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_04560	COG0010	Belongs to the arginase family
JNUCC6_04565	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JNUCC6_04570	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JNUCC6_04575	COG1982	Orn Lys Arg decarboxylase major
JNUCC6_04600	COG0561	phosphatase activity
JNUCC6_04615	COG0840	transmembrane signaling receptor activity
JNUCC6_04615	COG3290	protein histidine kinase activity
JNUCC6_04620	COG0840	transmembrane signaling receptor activity
JNUCC6_04635	COG4166	transmembrane transport
JNUCC6_04640	COG0601	transmembrane transport
JNUCC6_04645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_04650	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_04655	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_04715	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JNUCC6_04725	COG0431	NADPH-dependent FMN reductase
JNUCC6_04735	COG2318	DinB family
JNUCC6_04740	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNUCC6_04755	COG0477	Major facilitator Superfamily
JNUCC6_04780	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNUCC6_04795	COG1454	alcohol dehydrogenase
JNUCC6_04800	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_04810	COG1609	Transcriptional regulator
JNUCC6_04820	COG0697	spore germination
JNUCC6_04825	COG2732	(Barnase) inhibitor
JNUCC6_04830	COG1396	sequence-specific DNA binding
JNUCC6_04840	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_04865	COG2814	Major facilitator Superfamily
JNUCC6_04870	COG2116	formate transmembrane transporter activity
JNUCC6_04875	COG2188	Transcriptional regulator
JNUCC6_04880	COG2814	Major facilitator Superfamily
JNUCC6_04885	COG0813	purine-nucleoside phosphorylase activity
JNUCC6_04920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_04955	COG4122	O-methyltransferase activity
JNUCC6_04970	COG1309	transcriptional regulator
JNUCC6_04980	COG2076	Multidrug Resistance protein
JNUCC6_05025	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JNUCC6_05035	COG0395	ABC-type sugar transport system, permease component
JNUCC6_05040	COG1175	transmembrane transport
JNUCC6_05075	COG0577	efflux transmembrane transporter activity
JNUCC6_05080	COG1136	(ABC) transporter
JNUCC6_05085	COG2205	protein histidine kinase activity
JNUCC6_05090	COG0745	RESPONSE REGULATOR receiver
JNUCC6_05095	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNUCC6_05130	COG2211	Major facilitator Superfamily
JNUCC6_05160	COG0307	riboflavin synthase, alpha
JNUCC6_05165	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNUCC6_05165	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JNUCC6_05175	COG4106	trans-aconitate 2-methyltransferase activity
JNUCC6_05180	COG1595	DNA-templated transcription, initiation
JNUCC6_05190	COG0583	DNA-binding transcription factor activity
JNUCC6_05200	COG0842	Transport permease protein
JNUCC6_05200	COG1511	domain protein
JNUCC6_05205	COG1131	(ABC) transporter
JNUCC6_05210	COG2197	response regulator
JNUCC6_05215	COG4585	Histidine kinase
JNUCC6_05240	COG0778	Nitroreductase
JNUCC6_05245	COG1733	regulation of RNA biosynthetic process
JNUCC6_05340	COG0733	neurotransmitter:sodium symporter activity
JNUCC6_05345	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_05355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_05360	COG2207	Transcriptional regulator
JNUCC6_05360	COG3708	Transcriptional regulator
JNUCC6_05375	COG2816	NAD+ diphosphatase activity
JNUCC6_05380	COG1316	TRANSCRIPTIONal
JNUCC6_05410	COG0018	arginyl-trna synthetase
JNUCC6_05420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_05425	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JNUCC6_05425	COG0456	acetyltransferase
JNUCC6_05455	COG2226	methyltransferase
JNUCC6_05470	COG2357	RelA SpoT domain protein
JNUCC6_05480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_05525	COG0679	Auxin Efflux Carrier
JNUCC6_05535	COG2188	Transcriptional regulator
JNUCC6_05640	COG3973	AAA domain
JNUCC6_05650	COG0456	acetyltransferase
JNUCC6_05655	COG3773	Cell wall hydrolase
JNUCC6_05690	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JNUCC6_05705	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
JNUCC6_05715	COG1802	Transcriptional regulator
JNUCC6_05720	COG1307	EDD domain protein, DegV family
JNUCC6_05725	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNUCC6_05730	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_05735	COG3290	protein histidine kinase activity
JNUCC6_05735	COG0840	transmembrane signaling receptor activity
JNUCC6_05745	COG3655	Transcriptional regulator
JNUCC6_05765	COG0739	heme binding
JNUCC6_05770	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JNUCC6_05775	COG1132	(ABC) transporter
JNUCC6_05785	COG1063	alcohol dehydrogenase
JNUCC6_05800	COG1228	amidohydrolase
JNUCC6_05810	COG3314	Sporulation integral membrane protein YlbJ
JNUCC6_05825	COG2986	histidine ammonia-lyase
JNUCC6_05830	COG2056	Na+-H+ antiporter family
JNUCC6_05835	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNUCC6_05845	COG3314	Sporulation integral membrane protein YlbJ
JNUCC6_05850	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JNUCC6_05855	COG3829	transcription factor binding
JNUCC6_05870	COG2207	Transcriptional regulator
JNUCC6_05890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_05925	COG0537	adenosine 5'-monophosphoramidase activity
JNUCC6_05930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_05935	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNUCC6_05935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNUCC6_05935	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JNUCC6_05940	COG1105	Belongs to the carbohydrate kinase PfkB family
JNUCC6_05945	COG1349	DNA-binding transcription factor activity
JNUCC6_05965	COG1785	Belongs to the alkaline phosphatase family
JNUCC6_06040	COG2207	Transcriptional regulator
JNUCC6_06060	COG2226	methyltransferase
JNUCC6_06070	COG2909	trisaccharide binding
JNUCC6_06070	COG2909	trisaccharide binding
JNUCC6_06090	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNUCC6_06100	COG1136	(ABC) transporter
JNUCC6_06105	COG0577	efflux transmembrane transporter activity
JNUCC6_06110	COG5002	protein histidine kinase activity
JNUCC6_06115	COG0745	RESPONSE REGULATOR receiver
JNUCC6_06160	COG2226	methyltransferase
JNUCC6_06165	COG0798	PFAM Bile acid sodium symporter
JNUCC6_06170	COG0640	Transcriptional regulator
JNUCC6_06175	COG2190	(PTS) system
JNUCC6_06180	COG3711	transcriptional antiterminator
JNUCC6_06185	COG1263	PTS System
JNUCC6_06185	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JNUCC6_06215	COG5578	integral membrane protein
JNUCC6_06220	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JNUCC6_06225	COG0534	Mate efflux family protein
JNUCC6_06235	COG0395	ABC-type sugar transport system, permease component
JNUCC6_06245	COG4209	transmembrane transport
JNUCC6_06255	COG3842	ATPase activity
JNUCC6_06260	COG1349	DNA-binding transcription factor activity
JNUCC6_06295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JNUCC6_06305	COG0515	serine threonine protein kinase
JNUCC6_06305	COG2815	serine threonine protein kinase
JNUCC6_06320	COG2318	DinB family
JNUCC6_06340	COG1959	2 iron, 2 sulfur cluster binding
JNUCC6_06350	COG0124	histidyl-tRNA synthetase
JNUCC6_06355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_06360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_06380	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JNUCC6_06410	COG1595	DNA-templated transcription, initiation
JNUCC6_06425	COG3048	D-serine ammonia-lyase activity
JNUCC6_06430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JNUCC6_06435	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JNUCC6_06445	COG2112	serine threonine protein kinase
JNUCC6_06505	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNUCC6_06530	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JNUCC6_06535	COG0157	Belongs to the NadC ModD family
JNUCC6_06540	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JNUCC6_06545	COG1104	cysteine desulfurase activity
JNUCC6_06550	COG1827	regulation of RNA biosynthetic process
JNUCC6_06555	COG2205	protein histidine kinase activity
JNUCC6_06560	COG0745	RESPONSE REGULATOR receiver
JNUCC6_06565	COG2311	Membrane
JNUCC6_06580	COG1280	lysine exporter protein (LysE YggA)
JNUCC6_06595	COG2814	Major facilitator Superfamily
JNUCC6_06635	COG0494	nUDIX hydrolase
JNUCC6_06645	COG1011	Hydrolase
JNUCC6_06675	COG0463	Glycosyl transferase, family 2
JNUCC6_06675	COG0457	Tetratricopeptide repeat
JNUCC6_06710	COG3850	Histidine kinase
JNUCC6_06710	COG5002	protein histidine kinase activity
JNUCC6_06715	COG0745	RESPONSE REGULATOR receiver
JNUCC6_06720	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_06725	COG1253	flavin adenine dinucleotide binding
JNUCC6_06730	COG1174	glycine betaine transport
JNUCC6_06735	COG1125	glycine betaine transport
JNUCC6_06735	COG0517	IMP dehydrogenase activity
JNUCC6_06740	COG0583	DNA-binding transcription factor activity
JNUCC6_06745	COG0655	NAD(P)H dehydrogenase (quinone) activity
JNUCC6_06750	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_06755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_06760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_06765	COG1120	ATPase activity
JNUCC6_06780	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JNUCC6_06790	COG1113	amino acid transport
JNUCC6_06805	COG2378	regulation of single-species biofilm formation
JNUCC6_06825	COG1595	DNA-templated transcription, initiation
JNUCC6_06830	COG2333	competence protein COMEC
JNUCC6_06830	COG0658	competence protein
JNUCC6_06850	COG0456	acetyltransferase
JNUCC6_06855	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JNUCC6_06880	COG0328	RNA-DNA hybrid ribonuclease activity
JNUCC6_06885	COG0322	excinuclease ABC activity
JNUCC6_06895	COG1247	-acetyltransferase
JNUCC6_06910	COG1132	(ABC) transporter
JNUCC6_06915	COG1132	(ABC) transporter
JNUCC6_06920	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNUCC6_06925	COG1379	DNA repair
JNUCC6_06930	COG1278	Cold shock
JNUCC6_06945	COG0488	(ABC) transporter
JNUCC6_06970	COG1131	(ABC) transporter
JNUCC6_06995	COG0728	peptidoglycan biosynthetic process
JNUCC6_07010	COG0489	protein tyrosine kinase activity
JNUCC6_07015	COG3944	biosynthesis protein
JNUCC6_07020	COG4464	protein tyrosine phosphatase activity
JNUCC6_07025	COG1132	(ABC) transporter
JNUCC6_07040	COG0730	response to heat
JNUCC6_07045	COG0425	Belongs to the sulfur carrier protein TusA family
JNUCC6_07050	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_07050	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_07055	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_07055	COG0425	Belongs to the sulfur carrier protein TusA family
JNUCC6_07060	COG2210	Belongs to the sulfur carrier protein TusA family
JNUCC6_07065	COG3403	YqcI/YcgG family
JNUCC6_07070	COG1113	amino acid transport
JNUCC6_07075	COG2235	arginine
JNUCC6_07085	COG0277	FAD linked oxidase domain protein
JNUCC6_07105	COG1511	domain protein
JNUCC6_07110	COG0583	DNA-binding transcription factor activity
JNUCC6_07115	COG0561	phosphatase activity
JNUCC6_07120	COG2318	DinB family
JNUCC6_07135	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JNUCC6_07170	COG2318	DinB family
JNUCC6_07200	COG2329	Antibiotic biosynthesis monooxygenase
JNUCC6_07225	COG1234	tRNA 3'-trailer cleavage
JNUCC6_07250	COG2195	Cleaves the N-terminal amino acid of tripeptides
JNUCC6_07260	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNUCC6_07265	COG0346	lactoylglutathione lyase activity
JNUCC6_07275	COG4129	membrane
JNUCC6_07290	COG1703	isobutyryl-CoA mutase activity
JNUCC6_07295	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNUCC6_07295	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNUCC6_07300	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNUCC6_07305	COG0508	dehydrogenase complex catalyzes the overall conversion of
JNUCC6_07310	COG0022	dehydrogenase e1 component
JNUCC6_07315	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JNUCC6_07320	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JNUCC6_07330	COG3290	protein histidine kinase activity
JNUCC6_07330	COG3829	transcription factor binding
JNUCC6_07340	COG0584	glycerophosphoryl diester phosphodiesterase
JNUCC6_07355	COG0750	zinc metalloprotease
JNUCC6_07360	COG0497	DNA recombination
JNUCC6_07365	COG1438	arginine binding
JNUCC6_07370	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JNUCC6_07415	COG2814	Major facilitator Superfamily
JNUCC6_07425	COG0450	alkyl hydroperoxide reductase
JNUCC6_07430	COG3634	alkyl hydroperoxide reductase activity
JNUCC6_07455	COG1051	belongs to the nudix hydrolase family
JNUCC6_07500	COG0393	Putative heavy-metal-binding
JNUCC6_07505	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_07510	COG2378	regulation of single-species biofilm formation
JNUCC6_07515	COG0693	protein deglycase activity
JNUCC6_07645	COG0563	adenylate kinase activity
JNUCC6_07680	COG1595	DNA-templated transcription, initiation
JNUCC6_07695	COG0456	acetyltransferase
JNUCC6_07720	COG1733	regulation of RNA biosynthetic process
JNUCC6_07730	COG0300	oxidoreductase activity
JNUCC6_07735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_07740	COG5566	PFAM Mor transcription activator
JNUCC6_07750	COG1846	Transcriptional regulator
JNUCC6_07770	COG1302	Protein conserved in bacteria
JNUCC6_07775	COG0439	Biotin carboxylase
JNUCC6_07780	COG0511	ligase activity, forming carbon-carbon bonds
JNUCC6_07815	COG0006	proline dipeptidase activity
JNUCC6_07820	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JNUCC6_07830	COG3872	metal-dependent enzyme
JNUCC6_07850	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNUCC6_07860	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_07865	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNUCC6_07895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JNUCC6_07915	COG4537	Required for transformation and DNA binding
JNUCC6_07920	COG1459	type II secretion system
JNUCC6_07925	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JNUCC6_07950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_07965	COG1368	sulfuric ester hydrolase activity
JNUCC6_07975	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JNUCC6_07980	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JNUCC6_07995	COG0704	Plays a role in the regulation of phosphate uptake
JNUCC6_08005	COG0581	inorganic phosphate transmembrane transporter activity
JNUCC6_08010	COG0573	inorganic phosphate transmembrane transporter activity
JNUCC6_08015	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JNUCC6_08020	COG0768	penicillin binding
JNUCC6_08030	COG2839	Protein conserved in bacteria
JNUCC6_08035	COG1283	sodium-dependent phosphate transmembrane transporter activity
JNUCC6_08055	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JNUCC6_08065	COG0772	Belongs to the SEDS family
JNUCC6_08070	COG3853	Toxic anion resistance protein (TelA)
JNUCC6_08100	COG0861	Integral membrane protein TerC family
JNUCC6_08105	COG2310	stress, protein
JNUCC6_08110	COG2310	stress, protein
JNUCC6_08115	COG2310	stress, protein
JNUCC6_08125	COG1378	Sugar-specific transcriptional regulator TrmB
JNUCC6_08135	COG1309	transcriptional regulator
JNUCC6_08140	COG2814	Major facilitator Superfamily
JNUCC6_08155	COG0735	belongs to the Fur family
JNUCC6_08160	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JNUCC6_08165	COG1121	(ABC) transporter
JNUCC6_08195	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JNUCC6_08200	COG2384	SAM-dependent methyltransferase
JNUCC6_08210	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_08220	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JNUCC6_08225	COG0358	DNA primase activity
JNUCC6_08235	COG0517	IMP dehydrogenase activity
JNUCC6_08245	COG1381	Involved in DNA repair and RecF pathway recombination
JNUCC6_08260	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JNUCC6_08270	COG1480	7TM receptor with intracellular HD hydrolase
JNUCC6_08275	COG1702	phosphate starvation-inducible protein PhoH
JNUCC6_08295	COG4864	UPF0365 protein
JNUCC6_08300	COG1030	water channel activity
JNUCC6_08305	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JNUCC6_08310	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_08310	COG3347	Dehydrogenase
JNUCC6_08315	COG1069	ribulokinase activity
JNUCC6_08320	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
JNUCC6_08330	COG0235	Class ii aldolase
JNUCC6_08345	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_08355	COG1349	DNA-binding transcription factor activity
JNUCC6_08360	COG4154	Belongs to the RbsD FucU family
JNUCC6_08375	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_08380	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNUCC6_08385	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JNUCC6_08390	COG2264	protein methyltransferase activity
JNUCC6_08415	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNUCC6_08420	COG0481	GTPase activity
JNUCC6_08430	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JNUCC6_08445	COG1466	dna polymerase III delta subunit
JNUCC6_08455	COG0658	competence protein
JNUCC6_08455	COG2333	competence protein COMEC
JNUCC6_08460	COG2131	deaminase
JNUCC6_08465	COG1555	photosystem II stabilization
JNUCC6_08465	COG1596	polysaccharide export
JNUCC6_08470	COG2226	methyltransferase
JNUCC6_08475	COG0799	negative regulation of ribosome biogenesis
JNUCC6_08480	COG1713	HD superfamily hydrolase involved in NAD metabolism
JNUCC6_08485	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JNUCC6_08490	COG1534	Rna-binding protein
JNUCC6_08500	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JNUCC6_08505	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JNUCC6_08535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JNUCC6_08540	COG0572	uridine kinase
JNUCC6_08545	COG0826	peptidase U32
JNUCC6_08550	COG0826	peptidase U32
JNUCC6_08555	COG4122	O-methyltransferase activity
JNUCC6_08560	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JNUCC6_08565	COG3906	Belongs to the UPF0473 family
JNUCC6_08570	COG3906	Belongs to the UPF0473 family
JNUCC6_08575	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JNUCC6_08580	COG4472	Bacterial protein of unknown function (DUF965)
JNUCC6_08590	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JNUCC6_08595	COG0457	Tetratricopeptide repeat
JNUCC6_08605	COG1104	cysteine desulfurase activity
JNUCC6_08610	COG1959	2 iron, 2 sulfur cluster binding
JNUCC6_08615	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JNUCC6_08625	COG1668	transmembrane transport
JNUCC6_08630	COG4152	abc transporter atp-binding protein
JNUCC6_08645	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JNUCC6_08650	COG2971	BadF BadG BcrA BcrD
JNUCC6_08660	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNUCC6_08665	COG1447	Phosphotransferase system cellobiose-specific component IIA
JNUCC6_08670	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JNUCC6_08695	COG2188	Transcriptional regulator
JNUCC6_08725	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNUCC6_08735	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JNUCC6_08745	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JNUCC6_08745	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JNUCC6_08750	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNUCC6_08750	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JNUCC6_08765	COG2323	membrane
JNUCC6_08770	COG1862	Preprotein translocase
JNUCC6_08775	COG0343	queuine tRNA-ribosyltransferase activity
JNUCC6_08785	COG2255	four-way junction helicase activity
JNUCC6_08805	COG1827	regulation of RNA biosynthetic process
JNUCC6_08810	COG0077	Prephenate dehydratase
JNUCC6_08845	COG1994	Peptidase M50
JNUCC6_08855	COG2894	cell division
JNUCC6_08865	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JNUCC6_08870	COG1792	Involved in formation and maintenance of cell shape
JNUCC6_08875	COG1077	Cell shape determining protein MreB Mrl
JNUCC6_08880	COG2003	Belongs to the UPF0758 family
JNUCC6_08895	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JNUCC6_08920	COG1459	type II secretion system
JNUCC6_08930	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JNUCC6_08965	COG0285	dihydrofolate synthase activity
JNUCC6_08970	COG0285	dihydrofolate synthase activity
JNUCC6_08975	COG0525	valine-tRNA ligase activity
JNUCC6_08990	COG0113	porphobilinogen synthase activity
JNUCC6_09005	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNUCC6_09015	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JNUCC6_09020	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JNUCC6_09035	COG0457	Tetratricopeptide repeat
JNUCC6_09035	COG1477	protein flavinylation
JNUCC6_09040	COG0583	DNA-binding transcription factor activity
JNUCC6_09050	COG0786	glutamate:sodium symporter activity
JNUCC6_09060	COG0753	catalase activity
JNUCC6_09065	COG2027	D-alanyl-D-alanine carboxypeptidase
JNUCC6_09070	COG0463	Glycosyl transferase, family 2
JNUCC6_09080	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNUCC6_09115	COG2972	Histidine kinase
JNUCC6_09135	COG4806	L-rhamnose isomerase
JNUCC6_09140	COG3254	rhamnose metabolic process
JNUCC6_09145	COG1070	Carbohydrate kinase
JNUCC6_09150	COG1879	ABC-type sugar transport system periplasmic component
JNUCC6_09155	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_09160	COG1172	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_09165	COG1129	ABC transporter
JNUCC6_09170	COG1164	Oligoendopeptidase f
JNUCC6_09175	COG1024	Enoyl-CoA hydratase
JNUCC6_09190	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNUCC6_09200	COG0439	Biotin carboxylase
JNUCC6_09205	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_09220	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_09225	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_09230	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_09235	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_09245	COG1024	Enoyl-CoA hydratase
JNUCC6_09250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNUCC6_09265	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JNUCC6_09270	COG2116	formate transmembrane transporter activity
JNUCC6_09275	COG1278	Cold shock
JNUCC6_09290	COG1653	transport
JNUCC6_09300	COG4948	Mandelate Racemase Muconate Lactonizing
JNUCC6_09305	COG0800	Aldolase
JNUCC6_09310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNUCC6_09315	COG3386	PFAM SMP-30 Gluconolaconase
JNUCC6_09320	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_09325	COG1940	carbohydrate kinase activity
JNUCC6_09340	COG0622	Phosphoesterase
JNUCC6_09345	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JNUCC6_09350	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JNUCC6_09360	COG1846	Transcriptional regulator
JNUCC6_09365	COG2197	response regulator
JNUCC6_09370	COG0824	Thioesterase
JNUCC6_09375	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JNUCC6_09380	COG1053	succinate dehydrogenase
JNUCC6_09385	COG2009	succinate dehydrogenase
JNUCC6_09405	COG3118	belongs to the thioredoxin family
JNUCC6_09410	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JNUCC6_09415	COG2086	electron transfer activity
JNUCC6_09420	COG1024	Enoyl-CoA hydratase
JNUCC6_09425	COG1309	transcriptional regulator
JNUCC6_09430	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_09440	COG3766	membrane
JNUCC6_09445	COG1193	negative regulation of DNA recombination
JNUCC6_09450	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JNUCC6_09450	COG1796	DNA polymerase
JNUCC6_09470	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNUCC6_09475	COG1131	(ABC) transporter
JNUCC6_09485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNUCC6_09485	COG0072	phenylalanine-tRNA ligase activity
JNUCC6_09495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNUCC6_09500	COG0604	alcohol dehydrogenase
JNUCC6_09515	COG0277	FAD linked oxidase domain protein
JNUCC6_09520	COG0385	Bile acid
JNUCC6_09530	COG5002	protein histidine kinase activity
JNUCC6_09530	COG3850	Histidine kinase
JNUCC6_09535	COG0745	RESPONSE REGULATOR receiver
JNUCC6_09540	COG1408	metallophosphoesterase
JNUCC6_09545	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JNUCC6_09550	COG1363	Peptidase, m42
JNUCC6_09585	COG1959	2 iron, 2 sulfur cluster binding
JNUCC6_09615	COG1484	DNA-dependent DNA replication
JNUCC6_09620	COG3611	Membrane attachment protein
JNUCC6_09630	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JNUCC6_09635	COG0237	dephospho-CoA kinase activity
JNUCC6_09640	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JNUCC6_09645	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNUCC6_09645	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNUCC6_09650	COG5002	protein histidine kinase activity
JNUCC6_09655	COG0745	RESPONSE REGULATOR receiver
JNUCC6_09665	COG0039	L-malate dehydrogenase activity
JNUCC6_09670	COG0538	isocitrate dehydrogenase activity
JNUCC6_09675	COG0372	Belongs to the citrate synthase family
JNUCC6_09685	COG3030	protein affecting phage T7 exclusion by the F plasmid
JNUCC6_09695	COG0205	6-phosphofructokinase activity
JNUCC6_09700	COG0825	malonyl-CoA metabolic process
JNUCC6_09710	COG1725	Transcriptional regulator
JNUCC6_09715	COG0587	DNA-directed DNA polymerase activity
JNUCC6_09720	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JNUCC6_09730	COG4109	DRTGG domain
JNUCC6_09740	COG0006	proline dipeptidase activity
JNUCC6_09750	COG0589	response to stress
JNUCC6_09755	COG0827	DNA restriction-modification system
JNUCC6_09760	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JNUCC6_09765	COG1714	RDD family
JNUCC6_09770	COG0616	signal peptide processing
JNUCC6_09775	COG2962	Rard protein
JNUCC6_09780	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JNUCC6_09795	COG1104	cysteine desulfurase activity
JNUCC6_09800	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JNUCC6_09805	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JNUCC6_09810	COG1956	GAF domain-containing protein
JNUCC6_09815	COG2203	Gaf domain
JNUCC6_09815	COG2199	diguanylate cyclase activity
JNUCC6_09835	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_09840	COG1937	Protein conserved in bacteria
JNUCC6_09850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_09860	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JNUCC6_09870	COG0454	-acetyltransferase
JNUCC6_09875	COG0517	IMP dehydrogenase activity
JNUCC6_09880	COG0123	including yeast histone deacetylase and acetoin utilization protein
JNUCC6_09890	COG1605	Chorismate mutase
JNUCC6_09890	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JNUCC6_09895	COG0849	cell division
JNUCC6_09900	COG4980	gas vesicle protein
JNUCC6_09915	COG1674	ftsk spoiiie
JNUCC6_09920	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNUCC6_09925	COG4848	Belongs to the UPF0354 family
JNUCC6_09930	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_09940	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JNUCC6_09945	COG1363	Peptidase, m42
JNUCC6_09950	COG5584	Small secreted protein
JNUCC6_09955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_09965	COG1597	lipid kinase activity
JNUCC6_09985	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNUCC6_09990	COG1349	DNA-binding transcription factor activity
JNUCC6_09995	COG1187	pseudouridine synthase activity
JNUCC6_10000	COG2244	polysaccharide biosynthetic process
JNUCC6_10005	COG2081	HI0933 family
JNUCC6_10010	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_10020	COG1024	Enoyl-CoA hydratase
JNUCC6_10025	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_10030	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_10040	COG1024	Enoyl-CoA hydratase
JNUCC6_10045	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNUCC6_10050	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_10060	COG2340	Cysteine-rich secretory protein family
JNUCC6_10065	COG0670	Belongs to the BI1 family
JNUCC6_10075	COG0640	Transcriptional regulator
JNUCC6_10090	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JNUCC6_10095	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JNUCC6_10100	COG2814	Major facilitator Superfamily
JNUCC6_10105	COG1242	4 iron, 4 sulfur cluster binding
JNUCC6_10110	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JNUCC6_10115	COG3424	synthase
JNUCC6_10120	COG1755	Isoprenylcysteine carboxyl methyltransferase
JNUCC6_10125	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNUCC6_10130	COG1115	amino acid carrier protein
JNUCC6_10135	COG1115	amino acid carrier protein
JNUCC6_10140	COG2267	carboxylic ester hydrolase activity
JNUCC6_10145	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JNUCC6_10150	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JNUCC6_10165	COG1506	peptidase
JNUCC6_10170	COG0494	nUDIX hydrolase
JNUCC6_10200	COG0351	phosphomethylpyrimidine kinase
JNUCC6_10215	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JNUCC6_10220	COG0783	Belongs to the Dps family
JNUCC6_10230	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JNUCC6_10250	COG3279	Response regulator of the LytR AlgR family
JNUCC6_10260	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JNUCC6_10265	COG0596	Alpha beta hydrolase
JNUCC6_10275	COG1169	isochorismate synthase
JNUCC6_10290	COG1131	(ABC) transporter
JNUCC6_10310	COG2814	Major facilitator Superfamily
JNUCC6_10315	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JNUCC6_10320	COG0789	Transcriptional regulator
JNUCC6_10440	COG1285	pathogenesis
JNUCC6_10450	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JNUCC6_10455	COG2155	Conserved Protein
JNUCC6_10465	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JNUCC6_10470	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_10475	COG3829	transcription factor binding
JNUCC6_10480	COG1098	S1 RNA binding domain
JNUCC6_10490	COG1595	DNA-templated transcription, initiation
JNUCC6_10495	COG0733	neurotransmitter:sodium symporter activity
JNUCC6_10500	COG1396	sequence-specific DNA binding
JNUCC6_10510	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JNUCC6_10520	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JNUCC6_10525	COG2814	Major facilitator Superfamily
JNUCC6_10530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNUCC6_10540	COG2111	Na H antiporter
JNUCC6_10540	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNUCC6_10545	COG2111	Na H antiporter
JNUCC6_10550	COG1006	Multisubunit Na H antiporter MnhC subunit
JNUCC6_10555	COG0651	ATP synthesis coupled electron transport
JNUCC6_10560	COG1863	multisubunit Na H antiporter MnhE subunit
JNUCC6_10565	COG2212	antiporter activity
JNUCC6_10570	COG1320	monovalent cation:proton antiporter activity
JNUCC6_10580	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JNUCC6_10585	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JNUCC6_10600	COG1252	NADH dehydrogenase
JNUCC6_10605	COG0316	Belongs to the HesB IscA family
JNUCC6_10615	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JNUCC6_10620	COG4837	Protein of unknown function (DUF1462)
JNUCC6_10625	COG1252	NADH dehydrogenase
JNUCC6_10635	COG0647	UMP catabolic process
JNUCC6_10640	COG2445	Protein of unknown function DUF86
JNUCC6_10650	COG4470	Protein conserved in bacteria
JNUCC6_10655	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JNUCC6_10670	COG0737	Belongs to the 5'-nucleotidase family
JNUCC6_10675	COG0730	response to heat
JNUCC6_10680	COG1801	Protein of unknown function DUF72
JNUCC6_10685	COG0719	Fe-S assembly protein
JNUCC6_10690	COG0822	iron-sulfur transferase activity
JNUCC6_10695	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JNUCC6_10700	COG0719	Fe-S assembly protein
JNUCC6_10705	COG0396	ATPase activity
JNUCC6_10710	COG0493	'glutamate synthase
JNUCC6_10715	COG0069	glutamate synthase activity
JNUCC6_10715	COG0070	glutamate synthase
JNUCC6_10715	COG0067	glutamate synthase
JNUCC6_10720	COG0583	DNA-binding transcription factor activity
JNUCC6_10730	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JNUCC6_10735	COG1464	Belongs to the NlpA lipoprotein family
JNUCC6_10740	COG2011	ABC-type metal ion transport system permease component
JNUCC6_10745	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JNUCC6_10750	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_10755	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JNUCC6_10760	COG0509	glycine decarboxylation via glycine cleavage system
JNUCC6_10765	COG1393	Belongs to the ArsC family
JNUCC6_10770	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_10775	COG0183	Belongs to the thiolase family
JNUCC6_10780	COG1024	Enoyl-CoA hydratase
JNUCC6_10780	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNUCC6_10785	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_10795	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JNUCC6_10800	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
JNUCC6_10805	COG2986	histidine ammonia-lyase
JNUCC6_10810	COG1522	sequence-specific DNA binding
JNUCC6_10820	COG1764	response to oxidative stress
JNUCC6_10835	COG1595	DNA-templated transcription, initiation
JNUCC6_10855	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JNUCC6_10860	COG0778	Nitroreductase
JNUCC6_10955	COG0557	exoribonuclease II activity
JNUCC6_10960	COG1647	Serine aminopeptidase, S33
JNUCC6_10965	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JNUCC6_10985	COG0126	phosphoglycerate kinase activity
JNUCC6_10995	COG2390	Transcriptional regulator
JNUCC6_11005	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JNUCC6_11015	COG1704	LemA family
JNUCC6_11020	COG5577	PFAM Coat F domain
JNUCC6_11025	COG2814	Major facilitator Superfamily
JNUCC6_11030	COG1309	transcriptional regulator
JNUCC6_11045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JNUCC6_11055	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JNUCC6_11065	COG1051	belongs to the nudix hydrolase family
JNUCC6_11070	COG0492	ferredoxin-NADP+ reductase activity
JNUCC6_11075	COG0457	Tetratricopeptide repeat
JNUCC6_11080	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JNUCC6_11080	COG0140	phosphoribosyl-ATP diphosphatase activity
JNUCC6_11090	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JNUCC6_11095	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JNUCC6_11100	COG0131	Imidazoleglycerol-phosphate dehydratase
JNUCC6_11105	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JNUCC6_11120	COG0110	maltose O-acetyltransferase activity
JNUCC6_11135	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JNUCC6_11145	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JNUCC6_11150	COG1024	Enoyl-CoA hydratase
JNUCC6_11155	COG1854	S-ribosylhomocysteine lyase activity
JNUCC6_11160	COG0586	Pfam SNARE associated Golgi protein
JNUCC6_11165	COG1506	peptidase
JNUCC6_11165	COG0823	Involved in the tonB-independent uptake of proteins
JNUCC6_11165	COG4946	Tricorn protease homolog
JNUCC6_11170	COG1113	amino acid transport
JNUCC6_11175	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_11180	COG0577	efflux transmembrane transporter activity
JNUCC6_11185	COG1136	(ABC) transporter
JNUCC6_11190	COG2205	protein histidine kinase activity
JNUCC6_11195	COG0745	RESPONSE REGULATOR receiver
JNUCC6_11200	COG0095	Lipoate-protein ligase
JNUCC6_11210	COG1511	domain protein
JNUCC6_11215	COG1309	transcriptional regulator
JNUCC6_11225	COG5002	protein histidine kinase activity
JNUCC6_11240	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JNUCC6_11245	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JNUCC6_11255	COG2329	Antibiotic biosynthesis monooxygenase
JNUCC6_11260	COG1473	amidohydrolase
JNUCC6_11270	COG1131	(ABC) transporter
JNUCC6_11275	COG0537	adenosine 5'-monophosphoramidase activity
JNUCC6_11310	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNUCC6_11315	COG3481	metal-dependent phosphohydrolase, HD sub domain
JNUCC6_11320	COG4717	serine-type aminopeptidase activity
JNUCC6_11325	COG0420	3'-5' exonuclease activity
JNUCC6_11335	COG1024	Enoyl-CoA hydratase
JNUCC6_11350	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JNUCC6_11355	COG1011	Hydrolase
JNUCC6_11370	COG1929	Belongs to the glycerate kinase type-1 family
JNUCC6_11375	COG3835	regulator
JNUCC6_11380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JNUCC6_11425	COG1132	(ABC) transporter
JNUCC6_11430	COG1132	(ABC) transporter
JNUCC6_11435	COG1253	flavin adenine dinucleotide binding
JNUCC6_11440	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JNUCC6_11450	COG2197	response regulator
JNUCC6_11455	COG2203	Gaf domain
JNUCC6_11455	COG4585	Histidine kinase
JNUCC6_11460	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JNUCC6_11465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_11470	COG0564	pseudouridine synthase activity
JNUCC6_11475	COG0656	L-ascorbic acid biosynthetic process
JNUCC6_11480	COG2252	PERMEase
JNUCC6_11495	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JNUCC6_11500	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JNUCC6_11500	COG0072	phenylalanine-tRNA ligase activity
JNUCC6_11510	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_11515	COG0791	NLP P60 protein
JNUCC6_11520	COG4948	Mandelate Racemase Muconate Lactonizing
JNUCC6_11525	COG1619	proteins homologs of microcin C7 resistance protein MccF
JNUCC6_11530	COG4166	transmembrane transport
JNUCC6_11535	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_11540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_11545	COG0601	transmembrane transport
JNUCC6_11550	COG2362	D-Aminopeptidase
JNUCC6_11555	COG1619	proteins homologs of microcin C7 resistance protein MccF
JNUCC6_11565	COG1301	dicarboxylic acid transport
JNUCC6_11695	COG0735	belongs to the Fur family
JNUCC6_11705	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JNUCC6_11710	COG4129	membrane
JNUCC6_11715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_11720	COG0601	transmembrane transport
JNUCC6_11725	COG0747	negative chemotaxis
JNUCC6_11730	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_11735	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_11740	COG1132	(ABC) transporter
JNUCC6_11745	COG3557	Belongs to the UPF0374 family
JNUCC6_11760	COG1988	membrane-bound metal-dependent
JNUCC6_11780	COG2137	regulation of response to DNA damage stimulus
JNUCC6_11785	COG1090	epimerase
JNUCC6_11795	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JNUCC6_11800	COG0840	transmembrane signaling receptor activity
JNUCC6_11805	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JNUCC6_11810	COG1686	Belongs to the peptidase S11 family
JNUCC6_11815	COG0477	Major facilitator Superfamily
JNUCC6_11830	COG2217	Heavy metal translocating P-type atpase
JNUCC6_11835	COG1295	ribonuclease BN
JNUCC6_11845	COG1115	amino acid carrier protein
JNUCC6_11850	COG4840	Belongs to the UPF0435 family
JNUCC6_11860	COG1522	sequence-specific DNA binding
JNUCC6_11860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNUCC6_11865	COG1360	Flagellar Motor Protein
JNUCC6_11870	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JNUCC6_11875	COG2309	aminopeptidase activity
JNUCC6_11880	COG1077	Cell shape determining protein MreB Mrl
JNUCC6_11885	COG0288	reversible hydration of carbon dioxide
JNUCC6_11890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JNUCC6_11910	COG0024	Methionine aminopeptidase
JNUCC6_11915	COG3859	Proton-coupled thiamine transporter YuaJ
JNUCC6_11935	COG2309	aminopeptidase activity
JNUCC6_11940	COG0513	Belongs to the DEAD box helicase family
JNUCC6_11945	COG1794	racemase activity, acting on amino acids and derivatives
JNUCC6_11960	COG0367	asparagine synthase
JNUCC6_11995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_12010	COG2323	membrane
JNUCC6_12015	COG3377	Domain of unknown function (DUF1805)
JNUCC6_12020	COG2719	SpoVR family
JNUCC6_12025	COG2718	Belongs to the UPF0229 family
JNUCC6_12030	COG2766	serine protein kinase
JNUCC6_12035	COG1376	ErfK ybiS ycfS ynhG family protein
JNUCC6_12040	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JNUCC6_12050	COG1098	S1 RNA binding domain
JNUCC6_12055	COG0693	protein deglycase activity
JNUCC6_12065	COG2814	Major facilitator Superfamily
JNUCC6_12070	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JNUCC6_12075	COG4807	Protein conserved in bacteria
JNUCC6_12080	COG2814	Major facilitator Superfamily
JNUCC6_12090	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JNUCC6_12095	COG1294	oxidase, subunit
JNUCC6_12100	COG1271	oxidase subunit
JNUCC6_12105	COG1597	lipid kinase activity
JNUCC6_12135	COG4851	CamS sex pheromone cAM373 precursor
JNUCC6_12145	COG0210	DNA helicase
JNUCC6_12155	COG4496	protein, YerC YecD
JNUCC6_12160	COG1470	cell adhesion involved in biofilm formation
JNUCC6_12165	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JNUCC6_12175	COG0151	Belongs to the GarS family
JNUCC6_12185	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JNUCC6_12195	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JNUCC6_12210	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JNUCC6_12220	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JNUCC6_12225	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JNUCC6_12230	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JNUCC6_12240	COG0281	malic enzyme
JNUCC6_12260	COG2252	PERMEase
JNUCC6_12280	COG1283	sodium-dependent phosphate transmembrane transporter activity
JNUCC6_12285	COG0519	Catalyzes the synthesis of GMP from XMP
JNUCC6_12285	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JNUCC6_12290	COG1305	Transglutaminase-like
JNUCC6_12300	COG0714	Associated with various cellular activities
JNUCC6_12310	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JNUCC6_12315	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JNUCC6_12320	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNUCC6_12325	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JNUCC6_12330	COG0390	transport system, permease component
JNUCC6_12340	COG0753	catalase activity
JNUCC6_12345	COG2197	response regulator
JNUCC6_12350	COG4585	Histidine kinase
JNUCC6_12355	COG3239	Fatty acid desaturase
JNUCC6_12360	COG1410	methionine synthase
JNUCC6_12360	COG0646	methionine synthase
JNUCC6_12365	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JNUCC6_12365	COG0646	methionine synthase
JNUCC6_12375	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JNUCC6_12380	COG0025	NhaP-type Na H and K H
JNUCC6_12385	COG0006	proline dipeptidase activity
JNUCC6_12390	COG4166	transmembrane transport
JNUCC6_12405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_12410	COG0601	transmembrane transport
JNUCC6_12415	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JNUCC6_12420	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_12425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JNUCC6_12435	COG3938	Belongs to the proline racemase family
JNUCC6_12445	COG3829	transcription factor binding
JNUCC6_12445	COG3290	protein histidine kinase activity
JNUCC6_12465	COG1115	amino acid carrier protein
JNUCC6_12470	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JNUCC6_12470	COG2755	lipolytic protein G-D-S-L family
JNUCC6_12475	COG2247	cell wall binding repeat
JNUCC6_12475	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNUCC6_12495	COG3739	integral membrane protein
JNUCC6_12500	COG2610	gluconate transmembrane transporter activity
JNUCC6_12515	COG2084	Dehydrogenase
JNUCC6_12520	COG1802	Transcriptional regulator
JNUCC6_12530	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JNUCC6_12535	COG1177	transmembrane transport
JNUCC6_12545	COG3842	ATPase activity
JNUCC6_12555	COG0753	catalase activity
JNUCC6_12560	COG0300	oxidoreductase activity
JNUCC6_12565	COG5564	TIM-barrel signal transduction protein
JNUCC6_12575	COG5564	TIM-barrel signal transduction protein
JNUCC6_12580	COG1115	amino acid carrier protein
JNUCC6_12590	COG5504	Zn-dependent protease
JNUCC6_12595	COG2226	methyltransferase
JNUCC6_12610	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JNUCC6_12615	COG1266	CAAX protease self-immunity
JNUCC6_12620	COG0805	protein transport
JNUCC6_12625	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNUCC6_12635	COG0488	(ABC) transporter
JNUCC6_12645	COG0456	acetyltransferase
JNUCC6_12650	COG1214	PFAM Peptidase M22, glycoprotease
JNUCC6_12655	COG0802	atpase or kinase
JNUCC6_12725	COG2183	response to ionizing radiation
JNUCC6_12730	COG1191	sigma factor activity
JNUCC6_12735	COG2172	sigma factor antagonist activity
JNUCC6_12740	COG1366	Belongs to the anti-sigma-factor antagonist family
JNUCC6_12745	COG2337	Toxic component of a toxin-antitoxin (TA) module
JNUCC6_12760	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JNUCC6_12765	COG0736	holo-[acyl-carrier-protein] synthase activity
JNUCC6_12770	COG0705	Rhomboid family
JNUCC6_12775	COG3428	Bacterial PH domain
JNUCC6_12780	COG3402	PFAM membrane-flanked domain
JNUCC6_12785	COG0513	Belongs to the DEAD box helicase family
JNUCC6_12795	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JNUCC6_12800	COG1181	Belongs to the D-alanine--D-alanine ligase family
JNUCC6_12810	COG0772	Belongs to the SEDS family
JNUCC6_12825	COG2608	mercury ion transmembrane transporter activity
JNUCC6_12855	COG1823	symporter activity
JNUCC6_12860	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JNUCC6_12865	COG1876	peptidase activity
JNUCC6_12885	COG3279	Response regulator of the LytR AlgR family
JNUCC6_12890	COG0427	acetyl-CoA hydrolase
JNUCC6_12925	COG0346	lactoylglutathione lyase activity
JNUCC6_12980	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JNUCC6_12990	COG0708	Exodeoxyribonuclease III
JNUCC6_12995	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JNUCC6_13000	COG1733	regulation of RNA biosynthetic process
JNUCC6_13005	COG2514	catechol 2,3-dioxygenase activity
JNUCC6_13010	COG2353	YceI-like domain
JNUCC6_13025	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JNUCC6_13030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JNUCC6_13030	COG0723	plastoquinol--plastocyanin reductase activity
JNUCC6_13035	COG1227	inorganic diphosphatase activity
JNUCC6_13045	COG4948	Mandelate Racemase Muconate Lactonizing
JNUCC6_13050	COG1473	amidohydrolase
JNUCC6_13055	COG0427	acetyl-CoA hydrolase
JNUCC6_13060	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JNUCC6_13065	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JNUCC6_13070	COG0805	protein transport
JNUCC6_13075	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JNUCC6_13100	COG0477	Major facilitator Superfamily
JNUCC6_13105	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JNUCC6_13115	COG1959	2 iron, 2 sulfur cluster binding
JNUCC6_13120	COG2910	NAD(P)H-binding
JNUCC6_13130	COG2814	Major facilitator Superfamily
JNUCC6_13145	COG2329	Antibiotic biosynthesis monooxygenase
JNUCC6_13150	COG4607	ABC-type enterochelin transport system periplasmic component
JNUCC6_13155	COG4604	ABC transporter, ATP-binding protein
JNUCC6_13160	COG4605	iron ion homeostasis
JNUCC6_13165	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_13170	COG3104	oligopeptide transport
JNUCC6_13175	COG1132	(ABC) transporter
JNUCC6_13180	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JNUCC6_13190	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JNUCC6_13195	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_13200	COG0840	transmembrane signaling receptor activity
JNUCC6_13205	COG1757	Na H antiporter
JNUCC6_13215	COG2822	iron ion transport
JNUCC6_13220	COG2837	iron assimilation
JNUCC6_13225	COG0672	)-iron permease
JNUCC6_13230	COG0577	efflux transmembrane transporter activity
JNUCC6_13235	COG1136	(ABC) transporter
JNUCC6_13240	COG1595	DNA-templated transcription, initiation
JNUCC6_13260	COG2268	Band 7 protein
JNUCC6_13265	COG1585	Membrane protein implicated in regulation of membrane protease activity
JNUCC6_13270	COG1392	Phosphate transport regulator
JNUCC6_13275	COG0306	phosphate transporter
JNUCC6_13280	COG2409	Drug exporters of the RND superfamily
JNUCC6_13285	COG0400	carboxylic ester hydrolase activity
JNUCC6_13310	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JNUCC6_13315	COG0628	permease
JNUCC6_13330	COG3012	SEC-C Motif Domain Protein
JNUCC6_13330	COG1405	negative regulation of cell septum assembly
JNUCC6_13360	COG1215	transferase activity, transferring glycosyl groups
JNUCC6_13365	COG5298	Protein conserved in bacteria
JNUCC6_13375	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JNUCC6_13380	COG0217	transcriptional regulatory protein
JNUCC6_13385	COG2321	neutral zinc metallopeptidase
JNUCC6_13390	COG2409	Drug exporters of the RND superfamily
JNUCC6_13390	COG1033	growth of symbiont in host cell
JNUCC6_13405	COG0204	Acyl-transferase
JNUCC6_13430	COG1695	Transcriptional regulator
JNUCC6_13455	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JNUCC6_13460	COG1405	negative regulation of cell septum assembly
JNUCC6_13460	COG3012	SEC-C Motif Domain Protein
JNUCC6_13470	COG0446	pyridine nucleotide-disulphide oxidoreductase
JNUCC6_13485	COG0500	methyltransferase
JNUCC6_13490	COG0534	Mate efflux family protein
JNUCC6_13495	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JNUCC6_13500	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JNUCC6_13505	COG0351	phosphomethylpyrimidine kinase
JNUCC6_13520	COG1575	Belongs to the MenA family. Type 1 subfamily
JNUCC6_13530	COG1733	regulation of RNA biosynthetic process
JNUCC6_13535	COG0367	asparagine synthase
JNUCC6_13540	COG0596	Alpha beta hydrolase
JNUCC6_13555	COG2076	Multidrug Resistance protein
JNUCC6_13560	COG2076	Multidrug Resistance protein
JNUCC6_13570	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_13580	COG2153	protein acetylation
JNUCC6_13585	COG0697	spore germination
JNUCC6_13595	COG0840	transmembrane signaling receptor activity
JNUCC6_13600	COG2365	Tyrosine phosphatase family
JNUCC6_13605	COG0840	transmembrane signaling receptor activity
JNUCC6_13615	COG2814	Major facilitator Superfamily
JNUCC6_13630	COG3832	glyoxalase III activity
JNUCC6_13640	COG5002	protein histidine kinase activity
JNUCC6_13640	COG3850	Histidine kinase
JNUCC6_13645	COG0577	efflux transmembrane transporter activity
JNUCC6_13650	COG1136	(ABC) transporter
JNUCC6_13660	COG1388	LysM domain
JNUCC6_13690	COG0531	amino acid
JNUCC6_13710	COG1051	belongs to the nudix hydrolase family
JNUCC6_13735	COG2824	Alkylphosphonate utilization operon protein PhnA
JNUCC6_13740	COG1011	Hydrolase
JNUCC6_13760	COG0697	spore germination
JNUCC6_13765	COG1979	alcohol dehydrogenase
JNUCC6_13770	COG0431	NADPH-dependent FMN reductase
JNUCC6_13780	COG0346	lactoylglutathione lyase activity
JNUCC6_13795	COG0346	lactoylglutathione lyase activity
JNUCC6_13800	COG1846	Transcriptional regulator
JNUCC6_13810	COG0840	transmembrane signaling receptor activity
JNUCC6_13815	COG4122	O-methyltransferase activity
JNUCC6_13830	COG1309	transcriptional regulator
JNUCC6_13835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JNUCC6_13845	COG1335	isochorismatase
JNUCC6_13860	COG0832	Belongs to the urease beta subunit family
JNUCC6_13865	COG0804	urea catabolic process
JNUCC6_13870	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
JNUCC6_13875	COG0830	nickel cation binding
JNUCC6_13880	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JNUCC6_13885	COG0829	nickel cation binding
JNUCC6_13895	COG1124	(ABC) transporter
JNUCC6_13905	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_13910	COG0601	transmembrane transport
JNUCC6_13920	COG2318	DinB family
JNUCC6_13925	COG0402	S-adenosylhomocysteine deaminase activity
JNUCC6_13930	COG2233	PERMEase
JNUCC6_13935	COG0640	Transcriptional regulator
JNUCC6_13940	COG2814	Major facilitator Superfamily
JNUCC6_13945	COG2814	Major facilitator Superfamily
JNUCC6_13950	COG1121	(ABC) transporter
JNUCC6_13970	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JNUCC6_13975	COG0693	protein deglycase activity
JNUCC6_13985	COG4856	YbbR-like protein
JNUCC6_13990	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JNUCC6_13995	COG5662	AntiSigma factor
JNUCC6_14000	COG1595	DNA-templated transcription, initiation
JNUCC6_14135	COG1396	sequence-specific DNA binding
JNUCC6_14140	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JNUCC6_14145	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JNUCC6_14150	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JNUCC6_14155	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JNUCC6_14160	COG0512	Glutamine amidotransferase of anthranilate synthase
JNUCC6_14165	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JNUCC6_14170	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNUCC6_14180	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JNUCC6_14185	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JNUCC6_14190	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JNUCC6_14195	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JNUCC6_14195	COG0037	tRNA processing
JNUCC6_14215	COG1098	S1 RNA binding domain
JNUCC6_14220	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JNUCC6_14235	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JNUCC6_14240	COG3956	TIGRFAM MazG family protein
JNUCC6_14245	COG2244	polysaccharide biosynthetic process
JNUCC6_14255	COG2002	toxin-antitoxin pair type II binding
JNUCC6_14260	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JNUCC6_14270	COG0193	aminoacyl-tRNA hydrolase activity
JNUCC6_14275	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JNUCC6_14285	COG1696	Membrane protein involved in D-alanine export
JNUCC6_14290	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JNUCC6_14310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JNUCC6_14320	COG0251	oxidation-reduction process
JNUCC6_14325	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNUCC6_14330	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JNUCC6_14340	COG4466	Protein conserved in bacteria
JNUCC6_14355	COG3583	domain protein
JNUCC6_14355	COG3584	3D domain protein
JNUCC6_14360	COG0084	hydrolase, TatD family'
JNUCC6_14370	COG2002	toxin-antitoxin pair type II binding
JNUCC6_14375	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JNUCC6_14385	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JNUCC6_14390	COG4467	Involved in initiation control of chromosome replication
JNUCC6_14395	COG1774	PSP1 C-terminal conserved region
JNUCC6_14400	COG0470	DNA polymerase III
JNUCC6_14405	COG1728	Protein conserved in bacteria
JNUCC6_14410	COG3870	Protein conserved in bacteria
JNUCC6_14415	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JNUCC6_14445	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JNUCC6_14450	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JNUCC6_14455	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JNUCC6_14475	COG1428	Deoxynucleoside kinase
JNUCC6_14480	COG1428	Deoxynucleoside kinase
JNUCC6_14485	COG1388	LysM domain
JNUCC6_14485	COG3858	chitin binding
JNUCC6_14500	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JNUCC6_14505	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JNUCC6_14515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_14525	COG0516	GMP reductase activity
JNUCC6_14525	COG0517	IMP dehydrogenase activity
JNUCC6_14530	COG0386	Belongs to the glutathione peroxidase family
JNUCC6_14550	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JNUCC6_14555	COG0747	negative chemotaxis
JNUCC6_14560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_14565	COG0601	transmembrane transport
JNUCC6_14570	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_14580	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JNUCC6_14585	COG0187	DNA topoisomerase II activity
JNUCC6_14595	COG2501	S4 domain
JNUCC6_14600	COG0592	DNA-directed DNA polymerase activity
JNUCC6_14605	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JNUCC6_14625	COG1847	R3H domain protein
JNUCC6_14650	COG1192	Involved in chromosome partitioning
JNUCC6_14655	COG1475	DNA binding
JNUCC6_14660	COG1811	Na channel or pump
JNUCC6_14670	COG0668	transmembrane transport
JNUCC6_14675	COG4481	Protein conserved in bacteria
JNUCC6_14680	COG0012	GTP binding
JNUCC6_14700	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JNUCC6_14710	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JNUCC6_14720	COG0305	Participates in initiation and elongation during chromosome replication
JNUCC6_14740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_14745	COG1196	nuclear chromosome segregation
JNUCC6_14745	COG0739	heme binding
JNUCC6_14745	COG0741	lytic transglycosylase activity
JNUCC6_14750	COG0745	RESPONSE REGULATOR receiver
JNUCC6_14755	COG5002	protein histidine kinase activity
JNUCC6_14760	COG4863	YycH protein
JNUCC6_14770	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JNUCC6_14775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNUCC6_14815	COG1620	l-lactate permease
JNUCC6_14820	COG0039	L-malate dehydrogenase activity
JNUCC6_14835	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_14840	COG4708	membrane
JNUCC6_14850	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JNUCC6_14890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_14895	COG1120	ATPase activity
JNUCC6_14900	COG0748	coenzyme F420 binding
JNUCC6_14905	COG1132	(ABC) transporter
JNUCC6_14915	COG5002	protein histidine kinase activity
JNUCC6_14920	COG0477	Major facilitator Superfamily
JNUCC6_14925	COG1846	Transcriptional regulator
JNUCC6_14940	COG2169	Transcriptional regulator
JNUCC6_14945	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JNUCC6_14950	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JNUCC6_14960	COG0583	DNA-binding transcription factor activity
JNUCC6_14980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_14985	COG0765	amino acid transport
JNUCC6_14990	COG1126	abc transporter atp-binding protein
JNUCC6_14995	COG0583	DNA-binding transcription factor activity
JNUCC6_15005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_15010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_15015	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_15020	COG1120	ATPase activity
JNUCC6_15025	COG0492	ferredoxin-NADP+ reductase activity
JNUCC6_15030	COG4191	Histidine kinase
JNUCC6_15035	COG0784	Response regulator, receiver
JNUCC6_15045	COG0745	RESPONSE REGULATOR receiver
JNUCC6_15050	COG5002	protein histidine kinase activity
JNUCC6_15055	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JNUCC6_15080	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_15085	COG1846	Transcriptional regulator
JNUCC6_15090	COG0415	Belongs to the DNA photolyase family
JNUCC6_15100	COG1309	transcriptional regulator
JNUCC6_15125	COG0411	ABC transporter
JNUCC6_15145	COG1187	pseudouridine synthase activity
JNUCC6_15150	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_15160	COG2746	aminoglycoside 3-N-acetyltransferase activity
JNUCC6_15170	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_15175	COG1607	acyl-coa hydrolase
JNUCC6_15195	COG1725	Transcriptional regulator
JNUCC6_15200	COG1131	(ABC) transporter
JNUCC6_15205	COG1131	(ABC) transporter
JNUCC6_15210	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNUCC6_15215	COG0840	transmembrane signaling receptor activity
JNUCC6_15225	COG0598	Magnesium transport protein CorA
JNUCC6_15245	COG3880	PFAM UvrB UvrC protein
JNUCC6_15250	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JNUCC6_15255	COG0542	response to heat
JNUCC6_15260	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JNUCC6_15270	COG4956	integral membrane protein (PIN domain superfamily)
JNUCC6_15290	COG1045	serine acetyltransferase
JNUCC6_15305	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JNUCC6_15310	COG3688	RNA-binding protein containing a PIN domain
JNUCC6_15320	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JNUCC6_15325	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JNUCC6_15330	COG0250	Participates in transcription elongation, termination and antitermination
JNUCC6_15355	COG2813	Specifically methylates the guanine in position
JNUCC6_15370	COG1358	cellular component organization or biogenesis
JNUCC6_15380	COG0049	tRNA binding
JNUCC6_15395	COG0745	RESPONSE REGULATOR receiver
JNUCC6_15400	COG2205	protein histidine kinase activity
JNUCC6_15405	COG1136	(ABC) transporter
JNUCC6_15410	COG0577	efflux transmembrane transporter activity
JNUCC6_15415	COG2056	Na+-H+ antiporter family
JNUCC6_15440	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JNUCC6_15470	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JNUCC6_15475	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JNUCC6_15525	COG0201	protein transport
JNUCC6_15535	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JNUCC6_15540	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JNUCC6_15555	COG0202	RNA polymerase activity
JNUCC6_15565	COG1122	ATPase activity
JNUCC6_15570	COG1122	ATPase activity
JNUCC6_15575	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JNUCC6_15585	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JNUCC6_15595	COG0860	N-Acetylmuramoyl-L-alanine amidase
JNUCC6_15600	COG0489	protein tyrosine kinase activity
JNUCC6_15610	COG2194	sulfuric ester hydrolase activity
JNUCC6_15660	COG0412	Dienelactone hydrolase
JNUCC6_15665	COG1725	Transcriptional regulator
JNUCC6_15680	COG5566	PFAM Mor transcription activator
JNUCC6_15690	COG1937	Protein conserved in bacteria
JNUCC6_15695	COG2608	mercury ion transmembrane transporter activity
JNUCC6_15700	COG2217	Heavy metal translocating P-type atpase
JNUCC6_15725	COG0640	Transcriptional regulator
JNUCC6_15730	COG4585	Histidine kinase
JNUCC6_15745	COG0456	acetyltransferase
JNUCC6_15745	COG1846	Transcriptional regulator
JNUCC6_15760	COG2323	membrane
JNUCC6_15765	COG2223	nitrite transmembrane transporter activity
JNUCC6_15785	COG2111	Na H antiporter
JNUCC6_15785	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JNUCC6_15790	COG2111	Na H antiporter
JNUCC6_15795	COG1006	Multisubunit Na H antiporter MnhC subunit
JNUCC6_15800	COG0651	ATP synthesis coupled electron transport
JNUCC6_15805	COG1863	multisubunit Na H antiporter MnhE subunit
JNUCC6_15810	COG2212	antiporter activity
JNUCC6_15815	COG1320	monovalent cation:proton antiporter activity
JNUCC6_15825	COG2205	protein histidine kinase activity
JNUCC6_15840	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JNUCC6_15845	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JNUCC6_15855	COG0577	efflux transmembrane transporter activity
JNUCC6_15860	COG1136	(ABC) transporter
JNUCC6_15865	COG5002	protein histidine kinase activity
JNUCC6_15870	COG0745	RESPONSE REGULATOR receiver
JNUCC6_15880	COG0702	epimerase
JNUCC6_15885	COG0666	response to abiotic stimulus
JNUCC6_15895	COG1131	(ABC) transporter
JNUCC6_15935	COG1301	dicarboxylic acid transport
JNUCC6_15945	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JNUCC6_15960	COG1136	(ABC) transporter
JNUCC6_15965	COG0577	efflux transmembrane transporter activity
JNUCC6_15980	COG2059	Chromate
JNUCC6_15985	COG2059	Chromate
JNUCC6_15995	COG2205	protein histidine kinase activity
JNUCC6_16000	COG0745	RESPONSE REGULATOR receiver
JNUCC6_16005	COG1690	Belongs to the RtcB family
JNUCC6_16035	COG0501	Belongs to the peptidase M48B family
JNUCC6_16040	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JNUCC6_16045	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JNUCC6_16050	COG1126	abc transporter atp-binding protein
JNUCC6_16055	COG0765	amino acid transport
JNUCC6_16060	COG0765	amino acid transport
JNUCC6_16065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_16070	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_16080	COG1174	glycine betaine transport
JNUCC6_16090	COG1174	glycine betaine transport
JNUCC6_16105	COG1063	alcohol dehydrogenase
JNUCC6_16110	COG1312	Catalyzes the dehydration of D-mannonate
JNUCC6_16115	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_16120	COG2271	Major facilitator Superfamily
JNUCC6_16125	COG1609	Transcriptional regulator
JNUCC6_16135	COG2721	sulfolactate sulfo-lyase activity
JNUCC6_16140	COG0246	Mannitol dehydrogenase
JNUCC6_16145	COG1063	alcohol dehydrogenase
JNUCC6_16165	COG1268	BioY protein
JNUCC6_16170	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JNUCC6_16180	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_16185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_16190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_16195	COG1120	ATPase activity
JNUCC6_16200	COG2819	hydrolase of the alpha beta superfamily
JNUCC6_16205	COG4443	Transcriptional Coactivator p15 (PC4)
JNUCC6_16210	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNUCC6_16225	COG0395	ABC-type sugar transport system, permease component
JNUCC6_16235	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JNUCC6_16240	COG1737	Transcriptional regulator
JNUCC6_16250	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JNUCC6_16265	COG0791	NLP P60 protein
JNUCC6_16270	COG2329	Antibiotic biosynthesis monooxygenase
JNUCC6_16305	COG0753	catalase activity
JNUCC6_16315	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JNUCC6_16320	COG1473	amidohydrolase
JNUCC6_16330	COG2807	transmembrane transport
JNUCC6_16340	COG0833	amino acid
JNUCC6_16350	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JNUCC6_16355	COG2233	PERMEase
JNUCC6_16365	COG0385	Bile acid
JNUCC6_16375	COG3279	Response regulator of the LytR AlgR family
JNUCC6_16380	COG3275	phosphorelay sensor kinase activity
JNUCC6_16385	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_16390	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_16400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_16405	COG0747	negative chemotaxis
JNUCC6_16410	COG0402	S-adenosylhomocysteine deaminase activity
JNUCC6_16415	COG0402	S-adenosylhomocysteine deaminase activity
JNUCC6_16420	COG0697	spore germination
JNUCC6_16455	COG0737	Belongs to the 5'-nucleotidase family
JNUCC6_16460	COG1846	Transcriptional regulator
JNUCC6_16475	COG0583	DNA-binding transcription factor activity
JNUCC6_16480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNUCC6_16485	COG1126	abc transporter atp-binding protein
JNUCC6_16490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JNUCC6_16495	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JNUCC6_16500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_16505	COG0765	amino acid transport
JNUCC6_16510	COG0765	amino acid transport
JNUCC6_16515	COG0456	acetyltransferase
JNUCC6_16525	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JNUCC6_16550	COG1388	LysM domain
JNUCC6_16550	COG3584	3D domain protein
JNUCC6_16555	COG2032	superoxide dismutase activity
JNUCC6_16560	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JNUCC6_16560	COG0392	lysyltransferase activity
JNUCC6_16565	COG1131	(ABC) transporter
JNUCC6_16580	COG1473	amidohydrolase
JNUCC6_16585	COG1757	Na H antiporter
JNUCC6_16620	COG1122	ATPase activity
JNUCC6_16630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNUCC6_16635	COG1476	TRANSCRIPTIONal
JNUCC6_16650	COG1914	H( )-stimulated, divalent metal cation uptake system
JNUCC6_16705	COG2318	DinB family
JNUCC6_16725	COG0697	spore germination
JNUCC6_16760	COG0166	Belongs to the GPI family
JNUCC6_16765	COG0697	spore germination
JNUCC6_16780	COG2205	protein histidine kinase activity
JNUCC6_16790	COG2197	response regulator
JNUCC6_16815	COG1408	metallophosphoesterase
JNUCC6_16820	COG1968	undecaprenyl-diphosphatase activity
JNUCC6_16825	COG0745	RESPONSE REGULATOR receiver
JNUCC6_16830	COG3850	Histidine kinase
JNUCC6_16830	COG5002	protein histidine kinase activity
JNUCC6_16845	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNUCC6_16850	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JNUCC6_16855	COG0840	transmembrane signaling receptor activity
JNUCC6_16860	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JNUCC6_16875	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_16890	COG0531	amino acid
JNUCC6_16895	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JNUCC6_16915	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JNUCC6_16920	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_16925	COG0488	(ABC) transporter
JNUCC6_16930	COG0726	polysaccharide deacetylase
JNUCC6_16935	COG2966	Psort location CytoplasmicMembrane, score
JNUCC6_16940	COG3610	response to peptide
JNUCC6_16945	COG3300	MHYT domain
JNUCC6_16945	COG5001	Diguanylate cyclase
JNUCC6_16950	COG0697	spore germination
JNUCC6_16955	COG1132	(ABC) transporter
JNUCC6_16960	COG1132	(ABC) transporter
JNUCC6_16975	COG0456	acetyltransferase
JNUCC6_16975	COG0454	-acetyltransferase
JNUCC6_16980	COG2755	lipolytic protein G-D-S-L family
JNUCC6_16990	COG3973	AAA domain
JNUCC6_16995	COG0584	glycerophosphoryl diester phosphodiesterase
JNUCC6_17020	COG3706	GGDEF domain
JNUCC6_17025	COG0778	Nitroreductase
JNUCC6_17030	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JNUCC6_17035	COG4536	flavin adenine dinucleotide binding
JNUCC6_17040	COG1595	DNA-templated transcription, initiation
JNUCC6_17045	COG1846	Transcriptional regulator
JNUCC6_17050	COG1393	Belongs to the ArsC family
JNUCC6_17055	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_17060	COG0488	(ABC) transporter
JNUCC6_17075	COG0702	epimerase
JNUCC6_17080	COG0431	NADPH-dependent FMN reductase
JNUCC6_17085	COG3226	Transcriptional regulator
JNUCC6_17090	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNUCC6_17090	COG0551	DNA topoisomerase type I activity
JNUCC6_17100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JNUCC6_17105	COG2364	Membrane
JNUCC6_17110	COG0156	8-amino-7-oxononanoate synthase activity
JNUCC6_17115	COG0436	Aminotransferase
JNUCC6_17120	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JNUCC6_17125	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JNUCC6_17130	COG2011	ABC-type metal ion transport system permease component
JNUCC6_17135	COG1464	Belongs to the NlpA lipoprotein family
JNUCC6_17140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JNUCC6_17150	COG1714	RDD family
JNUCC6_17160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JNUCC6_17170	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_17185	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_17190	COG1132	(ABC) transporter
JNUCC6_17195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_17200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_17205	COG1120	ATPase activity
JNUCC6_17210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_17215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_17230	COG4120	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_17240	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JNUCC6_17245	COG0210	DNA helicase
JNUCC6_17250	COG3314	Sporulation integral membrane protein YlbJ
JNUCC6_17260	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JNUCC6_17295	COG2363	Small membrane protein
JNUCC6_17310	COG3773	Cell wall hydrolase
JNUCC6_17325	COG3253	May function as heme-dependent peroxidase
JNUCC6_17345	COG1078	dGTPase activity
JNUCC6_17350	COG3465	dGTPase activity
JNUCC6_17365	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNUCC6_17380	COG0018	arginyl-trna synthetase
JNUCC6_17385	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JNUCC6_17390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JNUCC6_17395	COG1120	ATPase activity
JNUCC6_17400	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
JNUCC6_17405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JNUCC6_17415	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JNUCC6_17420	COG0588	phosphoglycerate mutase activity
JNUCC6_17430	COG2096	Adenosyltransferase
JNUCC6_17445	COG2181	nitrate reductase activity
JNUCC6_17445	COG0247	lactate metabolic process
JNUCC6_17450	COG0183	Belongs to the thiolase family
JNUCC6_17455	COG1250	3-hydroxyacyl-CoA dehydrogenase
JNUCC6_17460	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_17465	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_17470	COG3226	Transcriptional regulator
JNUCC6_17475	COG1703	isobutyryl-CoA mutase activity
JNUCC6_17475	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNUCC6_17475	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
JNUCC6_17480	COG3343	RNA polymerase activity
JNUCC6_17485	COG0504	CTP synthase activity
JNUCC6_17490	COG4821	SIS domain
JNUCC6_17495	COG2204	response regulator
JNUCC6_17510	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JNUCC6_17515	COG1494	fructose-1,6-bisphosphatase
JNUCC6_17520	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JNUCC6_17525	COG0254	rRNA binding
JNUCC6_17530	COG1435	thymidine kinase activity
JNUCC6_17545	COG2890	protein-(glutamine-N5) methyltransferase activity
JNUCC6_17555	COG0009	L-threonylcarbamoyladenylate synthase
JNUCC6_17560	COG1971	Probably functions as a manganese efflux pump
JNUCC6_17575	COG0698	ribose 5-phosphate isomerase
JNUCC6_17600	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JNUCC6_17645	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JNUCC6_17650	COG4836	Membrane
JNUCC6_17660	COG2385	sporulation resulting in formation of a cellular spore
JNUCC6_17670	COG1609	Transcriptional regulator
JNUCC6_17675	COG1077	Cell shape determining protein MreB Mrl
JNUCC6_17680	COG4786	Flagellar basal body rod
JNUCC6_17685	COG4786	Flagellar basal body rod
JNUCC6_17695	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JNUCC6_17710	COG0629	single-stranded DNA binding
JNUCC6_17715	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JNUCC6_17720	COG4715	Zinc finger, swim domain protein
JNUCC6_17735	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNUCC6_17740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JNUCC6_17745	COG0765	amino acid transport
JNUCC6_17765	COG0436	Aminotransferase
JNUCC6_17775	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JNUCC6_17785	COG0463	Glycosyl transferase, family 2
JNUCC6_17785	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JNUCC6_17790	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JNUCC6_17805	COG1682	transport, permease protein
JNUCC6_17810	COG1134	teichoic acid transport
JNUCC6_17845	COG4974	Belongs to the 'phage' integrase family
JNUCC6_17855	COG4974	Belongs to the 'phage' integrase family
JNUCC6_17930	COG0793	Belongs to the peptidase S41A family
JNUCC6_17950	COG4172	Belongs to the ABC transporter superfamily
JNUCC6_17955	COG0601	transmembrane transport
JNUCC6_17960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_17985	COG2368	4-hydroxyphenylacetate
JNUCC6_17990	COG0658	competence protein
JNUCC6_17990	COG2333	competence protein COMEC
JNUCC6_17995	COG3361	conserved protein (COG2071)
JNUCC6_18005	COG1114	Component of the transport system for branched-chain amino acids
JNUCC6_18015	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_18020	COG3829	transcription factor binding
JNUCC6_18025	COG0506	proline dehydrogenase activity
JNUCC6_18035	COG4412	M6 family metalloprotease domain protein
JNUCC6_18035	COG1404	Belongs to the peptidase S8 family
JNUCC6_18055	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JNUCC6_18065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JNUCC6_18075	COG0084	hydrolase, TatD family'
JNUCC6_18090	COG0840	transmembrane signaling receptor activity
JNUCC6_18160	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNUCC6_18165	COG1388	LysM domain
JNUCC6_18165	COG0791	NLP P60 protein
JNUCC6_18170	COG1388	LysM domain
JNUCC6_18170	COG0791	NLP P60 protein
JNUCC6_18175	COG1316	TRANSCRIPTIONal
JNUCC6_18180	COG4903	ComK protein
JNUCC6_18190	COG0281	malic enzyme
JNUCC6_18195	COG0069	glutamate synthase activity
JNUCC6_18200	COG1114	Component of the transport system for branched-chain amino acids
JNUCC6_18205	COG0840	transmembrane signaling receptor activity
JNUCC6_18210	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNUCC6_18215	COG1316	TRANSCRIPTIONal
JNUCC6_18220	COG1739	Uncharacterized protein family UPF0029
JNUCC6_18230	COG2197	response regulator
JNUCC6_18245	COG1307	EDD domain protein, DegV family
JNUCC6_18250	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JNUCC6_18265	COG2747	anti-sigma28 factor FlgM
JNUCC6_18275	COG1256	bacterial-type flagellum assembly
JNUCC6_18275	COG4786	Flagellar basal body rod
JNUCC6_18280	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNUCC6_18295	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JNUCC6_18300	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JNUCC6_18315	COG1086	Polysaccharide biosynthesis protein
JNUCC6_18320	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JNUCC6_18325	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JNUCC6_18330	COG3980	spore coat polysaccharide biosynthesis protein
JNUCC6_18350	COG2089	acid synthase
JNUCC6_18365	COG1334	flagellar protein FlaG
JNUCC6_18370	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JNUCC6_18375	COG1516	flagellar protein fliS
JNUCC6_18400	COG0653	protein targeting
JNUCC6_18425	COG0556	nucleotide-excision repair
JNUCC6_18430	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JNUCC6_18435	COG3595	metallopeptidase activity
JNUCC6_18440	COG2884	Cell division ATP-binding protein ftsE
JNUCC6_18445	COG2177	Part of the ABC transporter FtsEX involved in
JNUCC6_18450	COG3883	PFAM NLP P60 protein
JNUCC6_18450	COG0791	NLP P60 protein
JNUCC6_18460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_18465	COG0793	Belongs to the peptidase S41A family
JNUCC6_18465	COG3409	Peptidoglycan-binding domain 1 protein
JNUCC6_18470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JNUCC6_18475	COG4897	Protein conserved in bacteria
JNUCC6_18485	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JNUCC6_18490	COG1396	sequence-specific DNA binding
JNUCC6_18495	COG0398	Pfam SNARE associated Golgi protein
JNUCC6_18510	COG2311	Membrane
JNUCC6_18525	COG0366	Alpha amylase catalytic
JNUCC6_18530	COG1307	EDD domain protein, DegV family
JNUCC6_18535	COG0561	phosphatase activity
JNUCC6_18540	COG1073	alpha beta
JNUCC6_18545	COG2151	metal-sulfur cluster biosynthetic enzyme
JNUCC6_18550	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JNUCC6_18565	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNUCC6_18570	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JNUCC6_18585	COG4166	transmembrane transport
JNUCC6_18590	COG0601	transmembrane transport
JNUCC6_18595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_18600	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_18605	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_18610	COG1393	Belongs to the ArsC family
JNUCC6_18620	COG4469	Competence protein
JNUCC6_18625	COG1164	Oligoendopeptidase f
JNUCC6_18630	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JNUCC6_18635	COG2346	COG2346, Truncated hemoglobins
JNUCC6_18640	COG0741	lytic transglycosylase activity
JNUCC6_18645	COG4116	CYTH
JNUCC6_18655	COG2357	RelA SpoT domain protein
JNUCC6_18665	COG0564	pseudouridine synthase activity
JNUCC6_18670	COG2239	Acts as a magnesium transporter
JNUCC6_18695	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JNUCC6_18720	COG2153	protein acetylation
JNUCC6_18725	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JNUCC6_18730	COG2382	esterase
JNUCC6_18735	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JNUCC6_18740	COG1525	nuclease
JNUCC6_18745	COG0456	acetyltransferase
JNUCC6_18755	COG0406	alpha-ribazole phosphatase activity
JNUCC6_18760	COG1392	Phosphate transport regulator
JNUCC6_18765	COG0306	phosphate transporter
JNUCC6_18770	COG0747	negative chemotaxis
JNUCC6_18780	COG1129	ABC transporter
JNUCC6_18780	COG0842	Transport permease protein
JNUCC6_18800	COG1473	amidohydrolase
JNUCC6_18810	COG0456	acetyltransferase
JNUCC6_18820	COG1619	proteins homologs of microcin C7 resistance protein MccF
JNUCC6_18825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JNUCC6_18845	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JNUCC6_18860	COG5337	Spore coat protein CotH
JNUCC6_18895	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_18900	COG3852	Histidine kinase
JNUCC6_18905	COG1363	Peptidase, m42
JNUCC6_18910	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNUCC6_18915	COG1705	Flagellar rod assembly protein muramidase FlgJ
JNUCC6_18915	COG1388	LysM domain
JNUCC6_18920	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JNUCC6_18930	COG3320	Male sterility
JNUCC6_18930	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNUCC6_18935	COG0861	Integral membrane protein TerC family
JNUCC6_18940	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JNUCC6_18950	COG5002	protein histidine kinase activity
JNUCC6_18955	COG1846	Transcriptional regulator
JNUCC6_18965	COG4873	Protein conserved in bacteria
JNUCC6_18980	COG2084	Dehydrogenase
JNUCC6_18985	COG2270	Major facilitator Superfamily
JNUCC6_18990	COG0784	Response regulator, receiver
JNUCC6_18990	COG0835	chemotaxis
JNUCC6_19000	COG0248	Ppx GppA phosphatase
JNUCC6_19015	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_19025	COG0517	IMP dehydrogenase activity
JNUCC6_19030	COG0583	DNA-binding transcription factor activity
JNUCC6_19035	COG2171	N-acyltransferase activity
JNUCC6_19040	COG1473	amidohydrolase
JNUCC6_19050	COG1131	(ABC) transporter
JNUCC6_19065	COG0714	Associated with various cellular activities
JNUCC6_19085	COG2814	Major facilitator Superfamily
JNUCC6_19090	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JNUCC6_19100	COG1176	ABC-type spermidine putrescine transport system, permease component I
JNUCC6_19105	COG3842	ATPase activity
JNUCC6_19110	COG1476	TRANSCRIPTIONal
JNUCC6_19120	COG2224	Isocitrate lyase
JNUCC6_19125	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JNUCC6_19140	COG0450	alkyl hydroperoxide reductase
JNUCC6_19145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_19150	COG0569	domain protein
JNUCC6_19155	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JNUCC6_19165	COG0561	phosphatase activity
JNUCC6_19195	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_19205	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JNUCC6_19215	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JNUCC6_19220	COG1309	transcriptional regulator
JNUCC6_19225	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JNUCC6_19230	COG1380	Effector of murein hydrolase LrgA
JNUCC6_19235	COG1346	cytolysis
JNUCC6_19260	COG0483	inositol monophosphate 1-phosphatase activity
JNUCC6_19270	COG1217	gtp-binding protein TYPA
JNUCC6_19280	COG4896	Protein conserved in bacteria
JNUCC6_19285	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JNUCC6_19295	COG0772	Belongs to the SEDS family
JNUCC6_19300	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JNUCC6_19335	COG3336	cytochrome c oxidase
JNUCC6_19340	COG2322	membrane
JNUCC6_19345	COG0628	permease
JNUCC6_19355	COG2340	Cysteine-rich secretory protein family
JNUCC6_19360	COG0527	aspartate kinase activity
JNUCC6_19365	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JNUCC6_19370	COG1280	lysine exporter protein (LysE YggA)
JNUCC6_19375	COG2814	Major facilitator Superfamily
JNUCC6_19385	COG3679	Belongs to the UPF0342 family
JNUCC6_19390	COG0584	glycerophosphoryl diester phosphodiesterase
JNUCC6_19395	COG4471	UPF0298 protein
JNUCC6_19410	COG0742	ribosomal rna small subunit methyltransferase
JNUCC6_19425	COG3480	Lon protease (S16) C-terminal proteolytic domain
JNUCC6_19445	COG1024	Enoyl-CoA hydratase
JNUCC6_19455	COG0439	Biotin carboxylase
JNUCC6_19465	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JNUCC6_19470	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JNUCC6_19485	COG2001	Belongs to the MraZ family
JNUCC6_19500	COG0768	penicillin binding
JNUCC6_19505	COG0768	penicillin binding
JNUCC6_19510	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JNUCC6_19515	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JNUCC6_19520	COG0772	Belongs to the SEDS family
JNUCC6_19525	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JNUCC6_19530	COG3879	Bacterial protein of unknown function (DUF881)
JNUCC6_19535	COG3879	Bacterial protein of unknown function (DUF881)
JNUCC6_19540	COG3856	small basic protein
JNUCC6_19545	COG0849	cell division
JNUCC6_19550	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JNUCC6_19560	COG1191	sigma factor activity
JNUCC6_19565	COG1191	sigma factor activity
JNUCC6_19575	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JNUCC6_19585	COG0762	integral membrane protein
JNUCC6_19590	COG2302	S4 RNA-binding domain
JNUCC6_19595	COG3599	regulation of cell shape
JNUCC6_19605	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JNUCC6_19610	COG0564	pseudouridine synthase activity
JNUCC6_19615	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JNUCC6_19625	COG0540	Belongs to the ATCase OTCase family
JNUCC6_19635	COG0505	Belongs to the CarA family
JNUCC6_19665	COG2514	catechol 2,3-dioxygenase activity
JNUCC6_19675	COG1561	YicC-like family, N-terminal region
JNUCC6_19690	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNUCC6_19695	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JNUCC6_19700	COG0242	peptide deformylase activity
JNUCC6_19710	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JNUCC6_19710	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JNUCC6_19720	COG0631	protein serine/threonine phosphatase activity
JNUCC6_19725	COG0515	serine threonine protein kinase
JNUCC6_19725	COG2815	serine threonine protein kinase
JNUCC6_19735	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JNUCC6_19740	COG1564	THIamine pyrophosphokinase
JNUCC6_19750	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JNUCC6_19755	COG1302	Protein conserved in bacteria
JNUCC6_19760	COG1461	Dihydroxyacetone kinase
JNUCC6_19765	COG1760	l-serine dehydratase
JNUCC6_19770	COG1760	l-serine dehydratase
JNUCC6_19775	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JNUCC6_19780	COG1349	DNA-binding transcription factor activity
JNUCC6_19790	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JNUCC6_19795	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_19800	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JNUCC6_19805	COG0571	ribonuclease III activity
JNUCC6_19810	COG1196	nuclear chromosome segregation
JNUCC6_19815	COG0552	protein localization to endoplasmic reticulum
JNUCC6_19820	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JNUCC6_19825	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JNUCC6_19835	COG1837	Belongs to the UPF0109 family
JNUCC6_19865	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JNUCC6_19875	COG2257	FlhB HrpN YscU SpaS Family
JNUCC6_19880	COG0045	succinate-CoA ligase (ADP-forming) activity
JNUCC6_19885	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JNUCC6_19890	COG0758	DNA mediated transformation
JNUCC6_19895	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JNUCC6_19905	COG4974	Belongs to the 'phage' integrase family
JNUCC6_19915	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JNUCC6_19925	COG1815	bacterial-type flagellum-dependent cell motility
JNUCC6_19930	COG1558	bacterial-type flagellum-dependent cell motility
JNUCC6_19935	COG1677	Flagellar hook-basal body complex protein FliE
JNUCC6_19940	COG1766	The M ring may be actively involved in energy transduction
JNUCC6_19945	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNUCC6_19955	COG1157	protein secretion by the type III secretion system
JNUCC6_19960	COG2882	bacterial-type flagellum organization
JNUCC6_19975	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JNUCC6_19985	COG4786	Flagellar basal body rod
JNUCC6_19990	COG1582	Flagellar protein (FlbD)
JNUCC6_20000	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNUCC6_20005	COG1776	CheC inhibitor of MCP methylation
JNUCC6_20005	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JNUCC6_20010	COG2201	protein-glutamate methylesterase activity
JNUCC6_20015	COG3190	flagellar
JNUCC6_20020	COG1338	Plays a role in the flagellum-specific transport system
JNUCC6_20025	COG1987	bacterial-type flagellum assembly
JNUCC6_20030	COG1684	flagellar biosynthetic protein fliR
JNUCC6_20035	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNUCC6_20040	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JNUCC6_20045	COG1419	protein localization to endoplasmic reticulum
JNUCC6_20050	COG0455	bacterial-type flagellum organization
JNUCC6_20055	COG2201	protein-glutamate methylesterase activity
JNUCC6_20060	COG0643	Histidine kinase
JNUCC6_20060	COG2198	Histidine kinase
JNUCC6_20065	COG0835	chemotaxis
JNUCC6_20070	COG1776	CheC inhibitor of MCP methylation
JNUCC6_20075	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
JNUCC6_20085	COG1191	sigma factor activity
JNUCC6_20110	COG0528	UMP kinase activity
JNUCC6_20115	COG0233	cytoplasmic translational termination
JNUCC6_20125	COG4589	Belongs to the CDS family
JNUCC6_20135	COG0750	zinc metalloprotease
JNUCC6_20145	COG2176	DNA-directed DNA polymerase activity
JNUCC6_20155	COG0195	Participates in both transcription termination and antitermination
JNUCC6_20160	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JNUCC6_20165	COG1358	cellular component organization or biogenesis
JNUCC6_20175	COG1550	Protein conserved in bacteria
JNUCC6_20180	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JNUCC6_20185	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JNUCC6_20190	COG0196	riboflavin kinase activity
JNUCC6_20205	COG0612	Peptidase, M16
JNUCC6_20220	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JNUCC6_20225	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JNUCC6_20235	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JNUCC6_20240	COG1674	ftsk spoiiie
JNUCC6_20245	COG2188	Transcriptional regulator
JNUCC6_20250	COG1744	ABC transporter substrate-binding protein PnrA-like
JNUCC6_20255	COG3845	ABC transporter
JNUCC6_20260	COG4603	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_20265	COG1079	Belongs to the binding-protein-dependent transport system permease family
JNUCC6_20270	COG0612	Peptidase, M16
JNUCC6_20275	COG0612	Peptidase, M16
JNUCC6_20280	COG1028	Short-chain dehydrogenase reductase Sdr
JNUCC6_20295	COG1426	Protein conserved in bacteria
JNUCC6_20300	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JNUCC6_20320	COG1692	metallophosphoesterase
JNUCC6_20325	COG2359	stage V sporulation protein S
JNUCC6_20330	COG0674	pyruvate-flavodoxin oxidoreductase activity
JNUCC6_20330	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JNUCC6_20335	COG1013	pyruvate-flavodoxin oxidoreductase activity
JNUCC6_20340	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JNUCC6_20345	COG4550	Control of competence regulator ComK, YlbF/YmcA
JNUCC6_20360	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JNUCC6_20380	COG1923	regulation of RNA biosynthetic process
JNUCC6_20385	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JNUCC6_20390	COG2860	membrane
JNUCC6_20395	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JNUCC6_20400	COG0789	Transcriptional regulator
JNUCC6_20405	COG0174	glutamine synthetase
JNUCC6_20410	COG0582	viral genome integration into host DNA
JNUCC6_20415	COG2856	Zn peptidase
JNUCC6_20475	COG5377	YqaJ viral recombinase family
JNUCC6_20485	COG3723	Recombinational DNA repair protein, rece pathway
JNUCC6_20495	COG1484	DNA-dependent DNA replication
JNUCC6_20510	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JNUCC6_20720	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JNUCC6_20740	COG3763	UPF0154 protein
JNUCC6_20745	COG1073	alpha beta
JNUCC6_20750	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JNUCC6_20770	COG0667	Aldo Keto reductase
JNUCC6_20785	COG0735	belongs to the Fur family
JNUCC6_20790	COG4974	Belongs to the 'phage' integrase family
JNUCC6_20800	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JNUCC6_20805	COG1012	belongs to the aldehyde dehydrogenase family
JNUCC6_20825	COG0697	spore germination
JNUCC6_20830	COG0019	diaminopimelate decarboxylase activity
JNUCC6_20840	COG1547	Domain of unknown function (DUF309)
JNUCC6_20845	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JNUCC6_20855	COG1686	Belongs to the peptidase S11 family
JNUCC6_20860	COG1187	pseudouridine synthase activity
JNUCC6_20865	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JNUCC6_20870	COG1333	cytochrome c biogenesis protein
JNUCC6_20875	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JNUCC6_20880	COG0745	RESPONSE REGULATOR receiver
JNUCC6_20885	COG5002	protein histidine kinase activity
JNUCC6_20890	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JNUCC6_20910	COG0583	DNA-binding transcription factor activity
JNUCC6_20915	COG1647	Serine aminopeptidase, S33
JNUCC6_20940	COG3615	Tellurite resistance protein tehB
JNUCC6_20940	COG0500	methyltransferase
JNUCC6_20945	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JNUCC6_20950	COG1473	amidohydrolase
JNUCC6_20955	COG3835	regulator
JNUCC6_20965	COG0747	negative chemotaxis
JNUCC6_20975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_20980	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_20985	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_21005	COG2070	2-Nitropropane dioxygenase
JNUCC6_21015	COG0318	PFAM AMP-dependent synthetase and ligase
JNUCC6_21020	COG1960	acyl-CoA dehydrogenase activity
JNUCC6_21035	COG2226	methyltransferase
JNUCC6_21060	COG1131	(ABC) transporter
JNUCC6_21065	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JNUCC6_21105	COG1141	Ferredoxin
JNUCC6_21110	COG4955	Helix-turn-helix domain
JNUCC6_21115	COG0514	ATP-dependent DNA helicase (RecQ)
JNUCC6_21120	COG1388	LysM domain
JNUCC6_21120	COG1705	Flagellar rod assembly protein muramidase FlgJ
JNUCC6_21130	COG0492	ferredoxin-NADP+ reductase activity
JNUCC6_21135	COG1280	lysine exporter protein (LysE YggA)
JNUCC6_21165	COG0758	DNA mediated transformation
JNUCC6_21165	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JNUCC6_21185	COG2339	peptidase activity
JNUCC6_21190	COG3409	Peptidoglycan-binding domain 1 protein
JNUCC6_21190	COG3773	Cell wall hydrolase
JNUCC6_21195	COG2959	enzyme of heme biosynthesis
JNUCC6_21210	COG0204	Acyl-transferase
JNUCC6_21215	COG0539	negative regulation of cytoplasmic translation
JNUCC6_21240	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JNUCC6_21260	COG0142	geranyltranstransferase activity
JNUCC6_21270	COG0142	geranyltranstransferase activity
JNUCC6_21275	COG0105	UTP biosynthetic process
JNUCC6_21280	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JNUCC6_21295	COG4401	Chorismate mutase type I
JNUCC6_21305	COG0287	Prephenate dehydrogenase
JNUCC6_21315	COG0457	Tetratricopeptide repeat
JNUCC6_21320	COG5582	Belongs to the UPF0302 family
JNUCC6_21330	COG0723	plastoquinol--plastocyanin reductase activity
JNUCC6_21345	COG4347	Protein of unknown function (DUF1405)
JNUCC6_21350	COG2738	Putative neutral zinc metallopeptidase
JNUCC6_21355	COG1388	LysM domain
JNUCC6_21355	COG0791	NLP P60 protein
JNUCC6_21360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_21365	COG1694	Mazg nucleotide pyrophosphohydrolase
JNUCC6_21380	COG0438	transferase activity, transferring glycosyl groups
JNUCC6_21385	COG0617	tRNA 3'-terminal CCA addition
JNUCC6_21395	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
JNUCC6_21395	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
JNUCC6_21410	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JNUCC6_21415	COG1199	ATP-dependent helicase activity
JNUCC6_21415	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JNUCC6_21435	COG0017	Asparaginyl-tRNA synthetase
JNUCC6_21440	COG3935	DnaD domain protein
JNUCC6_21445	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JNUCC6_21455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JNUCC6_21455	COG4499	WXG100 protein secretion system (Wss), protein YukC
JNUCC6_21475	COG1111	helicase
JNUCC6_21475	COG1205	dead DEAH box helicase
JNUCC6_21480	COG3359	exonuclease
JNUCC6_21485	COG3599	regulation of cell shape
JNUCC6_21500	COG0116	Belongs to the methyltransferase superfamily
JNUCC6_21510	COG1199	ATP-dependent helicase activity
JNUCC6_21520	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JNUCC6_21530	COG5002	protein histidine kinase activity
JNUCC6_21530	COG0784	Response regulator, receiver
JNUCC6_21535	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JNUCC6_21540	COG2208	phosphoserine phosphatase activity
JNUCC6_21545	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JNUCC6_21550	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JNUCC6_21560	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JNUCC6_21570	COG0861	Integral membrane protein TerC family
JNUCC6_21575	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JNUCC6_21580	COG0489	protein tyrosine kinase activity
JNUCC6_21620	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JNUCC6_21625	COG0745	RESPONSE REGULATOR receiver
JNUCC6_21630	COG2205	protein histidine kinase activity
JNUCC6_21630	COG0784	Response regulator, receiver
JNUCC6_21645	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JNUCC6_21650	COG1671	Belongs to the UPF0178 family
JNUCC6_21665	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNUCC6_21685	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JNUCC6_21705	COG1846	Transcriptional regulator
JNUCC6_21710	COG2814	Major facilitator Superfamily
JNUCC6_21715	COG0328	RNA-DNA hybrid ribonuclease activity
JNUCC6_21725	COG0527	aspartate kinase activity
JNUCC6_21730	COG1253	flavin adenine dinucleotide binding
JNUCC6_21745	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNUCC6_21760	COG4209	transmembrane transport
JNUCC6_21765	COG0395	ABC-type sugar transport system, permease component
JNUCC6_21775	COG1609	Transcriptional regulator
JNUCC6_21785	COG5578	integral membrane protein
JNUCC6_21790	COG1917	Cupin 2, conserved barrel domain protein
JNUCC6_21790	COG4977	sequence-specific DNA binding
JNUCC6_21795	COG1486	melibiose metabolic process
JNUCC6_21800	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JNUCC6_21805	COG2226	methyltransferase
JNUCC6_21810	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JNUCC6_21815	COG0626	cystathionine gamma-synthase activity
JNUCC6_21820	COG1418	mRNA catabolic process
JNUCC6_21825	COG0488	(ABC) transporter
JNUCC6_21830	COG1413	lyase activity
JNUCC6_21855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JNUCC6_21865	COG5632	N-Acetylmuramoyl-L-alanine amidase
JNUCC6_21865	COG3409	Peptidoglycan-binding domain 1 protein
JNUCC6_21885	COG2200	EAL domain
JNUCC6_21895	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JNUCC6_21910	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JNUCC6_21960	COG0577	efflux transmembrane transporter activity
JNUCC6_21965	COG1136	(ABC) transporter
JNUCC6_21975	COG5002	protein histidine kinase activity
JNUCC6_21980	COG1193	negative regulation of DNA recombination
JNUCC6_22000	COG4978	Transcriptional regulator
JNUCC6_22000	COG0789	Transcriptional regulator
JNUCC6_22005	COG1266	CAAX protease self-immunity
JNUCC6_22020	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JNUCC6_22030	COG4326	sporulation control protein
JNUCC6_22040	COG0531	amino acid
JNUCC6_22050	COG1522	sequence-specific DNA binding
JNUCC6_22055	COG2362	D-Aminopeptidase
JNUCC6_22060	COG0601	transmembrane transport
JNUCC6_22065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JNUCC6_22070	COG0444	Belongs to the ABC transporter superfamily
JNUCC6_22075	COG4608	Belongs to the ABC transporter superfamily
JNUCC6_22080	COG4166	transmembrane transport
JNUCC6_22100	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JNUCC6_22105	COG2217	Heavy metal translocating P-type atpase
JNUCC6_22120	COG0501	Belongs to the peptidase M48B family
JNUCC6_22125	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JNUCC6_22140	COG4948	Mandelate Racemase Muconate Lactonizing
JNUCC6_22150	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JNUCC6_22155	COG1742	UPF0060 membrane protein
JNUCC6_22160	COG0737	Belongs to the 5'-nucleotidase family
JNUCC6_22165	COG2271	Major facilitator Superfamily
JNUCC6_22180	COG0656	L-ascorbic acid biosynthetic process
JNUCC6_22185	COG2814	Major facilitator Superfamily
JNUCC6_22190	COG1733	regulation of RNA biosynthetic process
JNUCC6_22200	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JNUCC6_22205	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)