LOCUS MH649148 4388 bp DNA circular ENV 01-SEP-2018 DEFINITION Virus sp. isolate ctcj206, complete genome. ACCESSION MH649148 VERSION MH649148.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09634265 Sequence Read Archive: SRR7501340 KEYWORDS ENV. SOURCE Virus sp. (animal metagenome) ORGANISM Virus sp. Viruses; unclassified viruses. REFERENCE 1 (bases 1 to 4388) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4388) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (19-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 6.949863x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4388 /organism="Virus sp." /mol_type="genomic DNA" /isolate="ctcj206" /isolation_source="seabass tissue" /db_xref="taxon:2202649" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4370701; metagenomic; derived from metagenome: animal metagenome" CDS 1..693 /inference="similar to AA sequence:UniProtKB:X1U9W6_9ZZZZ" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66298.1" /translation="MANVDSYGQLVMRNNMVVPLSNAATTEATEDSIPTDANFVGSAQ TAGTFATQSLGSSVVVAAGLSAENDVSYAYVRSAGKIKLALPVSGLSSGMGLPAPLPY PAQLVSGDDVVAMTNAVSDREVSLSVACSSGEYHVFAVTPNALKEWELLSILTGQSIG ETLQGRTVTHAFAMGGNNAANFVSPIYFLNGSGTPIGTVTPNDPAIDSGLYQRCVVPI ALNTRVVFRTDA" CDS 861..1301 /inference="similar to AA sequence:UniProtKB:X1BK64_9ZZZZ" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66299.1" /translation="MYYCYGLIRSVLTSCPANTALYRGITCFTAGENPVEIRMGAFWG GDLNEFYTLALAPPAWVSGTSTVEGTNPESDANGIIPITGGIKGGLFTNAKKGNIFIP VTIDDSIISPVIVPPFYNLVVYPTTGTMNTSLQLTILGMDLMKP" CDS 1419..1883 /note="No HHBLITS hits" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66300.1" /translation="MTPLVEIAKDNTLFYFVLVPLLASLAGILGFTWLYVGRDDLNTA KDVFDDFMATYDNARANGTIAAASTTLFATIPFGNGFLQNAAQENPQQVGAILADIDL VGIATDPMTYIDPIIQAADDLRPTNPFGVNTVIDPVAGGVDSLLGYLAGLVD" CDS complement(1946..2428) /inference="similar to AA sequence:UniProtKB:D8LZY5_BLAHO" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66304.1" /translation="MASSQIVKSVSLTPHTAMIVDDVLPSGKFSAFVRECLEQYENHK KPETGSCLTPHRNDLNITRCNPVGSARKCLYCWPNGSPTAEDWKEYRRRPLVGHSGYI LSPNPRYADHEWIDTKAKENNPHKIDFRDYDRKMKEQAKKKEKTPKLGLIRRFIRFIY " CDS complement(2553..2918) /inference="protein motif:Scop:cd16341" /note="FdhE; formate dehydrogenase accessory protein FdhE and similar proteins" /codon_start=1 /product="formate dehydrogenase accessory protein" /protein_id="AXQ66303.1" /translation="MKLPEEDRLGSGMIHCLDCGLSADVKASDMAAWKALGCPECGEG VNAQIDIGTGRGSIDTAVHNDDGSITCTFCEGEIHMAWQEDEEGNLTGTIMRASSVEI EDCPSCDRAFKRMRSEGLI" CDS complement(2915..3388) /inference="protein motif:CDD:310452" /note="DNA N-6-adenine-methyltransferase (Dam)" /codon_start=1 /product="DNA N-6-adenine-methyltransferase" /protein_id="AXQ66305.1" /translation="MKIDKKTHNDDLFRNGQYERSGSDYWLTPVDLLEEIKAKYSPNQ ELFDPCPRKPDFDGLMMDDWPLDKWIFVNPPYSDLARWSKKCFVESQKGARIILLIPA RTCTKYFHQWIYNNCEIIFIKGRLKYLNPVTGKSRGSAPFPSILCIYNNNSEGIQ" CDS 3594..3890 /inference="similar to AA sequence:UniProtKB:X1UH60_9ZZZZ" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66301.1" /translation="MDIILVGIIVGILLNLVLLKAILELSRQITEELQELDGTLAQAI GKVVENLGIGDFEPVNPIQAALAQLMTSKIQGIKDQQAPIEINRSDNGFFAKKQ" CDS 3956..4384 /inference="similar to AA sequence:UniProtKB:X1VFH0_9ZZZZ" /codon_start=1 /product="hypothetical protein" /protein_id="AXQ66302.1" /translation="MAKRKAKQRRRSNGGIRVLNVLESLTYAEIISRGTTGGGLGQLI FGETDLGMKQIGIKTQFYDNTEMVAVGEGQISLGDIVSQPSQAIAVMTSNFQKNLMPM AVAGFTTSIGFRVGRSLLRRPISNINRNLMRPLFGKSVRL" ORIGIN 1 atggcaaacg tagattcata cggccaactt gttatgagaa ataacatggt tgttccatta 61 tcaaacgcgg ctactacaga ggccacagaa gattctatcc ctactgatgc gaacttcgta 121 ggatcggctc aaactgcagg aactttcgcg actcaatctc ttggatcttc cgttgtggta 181 gcggctggat tatctgcaga gaatgacgta agttatgctt atgtcagatc ggcaggtaag 241 atcaaactgg ctttgccggt ttcaggactc tcctctggaa tgggcttacc tgcccctctt 301 ccttaccctg cacaattagt atcaggtgat gacgttgtgg ctatgactaa cgccgtttca 361 gatcgtgaag tttctctttc agtggcttgt tcctctgggg aataccatgt atttgctgtt 421 acacctaacg cactaaaaga atgggaatta ttatccattt taacgggtca atccataggg 481 gaaactctgc agggtagaac tgttactcat gctttcgcta tgggcggtaa taacgcggct 541 aacttcgtat ctcctatcta tttcttaaac ggatcaggaa caccgatcgg aactgttaca 601 cctaacgatc ctgcaataga ttcaggatta tatcaacgat gtgtagtgcc tattgcatta 661 aacactagag tcgtattcag aacggacgct tagaggtcga ttatatggct gtaagtagaa 721 gagcgagggc tagattcaaa ataatgccaa agtctgaaaa gatggcagtt aagaaagccg 781 ttaaattgct ttatcagacc gaacttatgg gcgtcaaaag aatgaatgaa ataatgagat 841 tgtgcgagaa gtgatcctct atgtattatt gctatggatt aattcggtca gtattgacct 901 cttgccctgc aaatacggca ttatatcgag gaattacctg ctttactgca ggtgaaaacc 961 ccgttgagat ccgaatgggt gccttctggg gtggagatct caacgagttt tacactttgg 1021 cattagcacc gccggcatgg gtgtcaggaa cgtctactgt cgaagggacg aatccagaat 1081 cagacgccaa cggaattata ccaataacag ggggtataaa gggcggatta tttaccaatg 1141 ctaagaaagg gaacatattc atccctgtta cgatcgatga ttcaatcata tcgcccgtaa 1201 tagtgccccc attttacaat ctggttgtat atcctacaac tggaactatg aacacctcgc 1261 tacaattgac aattttaggt atggacttga tgaaaccgtg aggggatcaa gtgcctaaaa 1321 aacctgcaga taatgtgaat ataaatcgca tagagtttca aaactctgaa agaggtcaga 1381 tcgacaagat cgcaaactcg atcgcgttta agaattacat gacgcctcta gtagagattg 1441 ctaaagacaa tactttgttt tatttcgttt tagtgcctct tcttgcatca ctagcgggga 1501 tcttaggttt tacatggcta tatgtcggca gagacgattt aaacaccgct aaagatgtct 1561 ttgatgactt tatggctact tatgataatg caagagcaaa cggaacgatc gcggcggcgt 1621 ctactacttt attcgcgaca attccattcg gtaatggatt ccttcagaat gcggctcaag 1681 agaaccctca acaagtgggt gctatacttg cagatataga tctagtagga attgcgaccg 1741 atcccatgac ttacattgat ccaataatac aagcggctga tgatttaaga ccgactaatc 1801 cgttcggtgt gaatactgtt attgatcccg ttgctggcgg cgtggattca ttattagggt 1861 atcttgcggg gttggtggat tgatggcaac atttcacgct cttaccatca ggagatcttc 1921 attctaattt cgtacgattt tgaaattagt aaataaaacg aataaaacgg cgaattaaac 1981 ctaatttcgg ggttttctct tttttctttg cttgttcctt cattttacga tcataatcgc 2041 gaaaatcaat cttgtgcgga ttattttctt tcgcttttgt atcgatccat tcgtgatcgg 2101 catatctcgg atttgggctt agaatatacc cactatgacc gactaaaggc cttctgcggt 2161 attctttcca atcttctgca gtaggtgagc cattaggcca acaatacagg catttcctcg 2221 cagatcctac aggattacac cgagtaatat ttagatcgtt cctatgaggc gttaaacaag 2281 atcccgtctc tggttttttg tggttttcgt attgttcaag gcattctcta acgaatgccg 2341 aaaacttacc tgaaggtaac acatcatcaa cgatcatagc agtatgcggt gttaatgata 2401 cacttttgac aatttgactc gatgccatta aaccatctcc gacaaaatat gagatccgcc 2461 ctgaattgac ccacaatcta aagactgaat aattcttact tgatcaaaac tgataacatt 2521 gaaaactttt ttacattttt tacatctaag attcatatta atccctctga tctcattctt 2581 ttgaaagcac gatcgcaaga cggacaatct tcaatttcta cacttgacgc tctcattatt 2641 gtgcctgtta aattgccttc ttcatcttct tgccaagcca tatgaatctc accttcgcag 2701 aatgtgcagg taatagatcc atcatcgttg tgaactgcag tatctattga tcctcgaccc 2761 gttccgatgt caatttgagc attgacaccc tcgccgcatt cggggcatcc taacgctttc 2821 catgcggcca tatctgatgc ttttacatct gcagacaatc cacaatctaa acagtgaatc 2881 attccagatc ctaaacgatc ctcttctggt aatttcattg aatcccctca ctattattat 2941 tgtaaataca taaaatagaa ggaaaagggg cagatccccg actttttccg gttacaggat 3001 ttagatattt caaacggcct ttaatgaata taatttcgca attgttatag atccattgat 3061 gaaagtattt cgtgcaggtt ctcgccggaa ttaataagat aattctagcc cctttttgag 3121 attcaacgaa acactttttt gaccatctcg ctagatctga atatggtgga ttgacaaaga 3181 tccatttatc taacggccaa tcatccatca ttaaaccgtc aaaatctggt tttctcggac 3241 atggatcaaa taattcttga ttaggcgaat atttcgcttt tatttcctca agaagatcca 3301 ctggcgtcag ccaatagtcg gatccagacc tttcatactg cccattccta aacagatcgt 3361 cgttatgcgt ttttttatct attttcatac tttttttcac tctcctaagg atatttgaaa 3421 atacccttca ggaaatgcga aaacaagatc acttatgaat gttttattat aattaatatg 3481 gataaaatat gtctatatat atatttatta ttagtaatag aagagagaga gagagagaga 3541 gagagagaga gcgatccaga gcgttcaaga accgttgagg gtcggttgag ggtatggata 3601 tcatactagt agggataatt gttggaatat tgcttaattt ggtcttatta aaggctattt 3661 tagaactttc cagacaaata actgaagaat tacaagaatt ggacggaaca ttagcacaag 3721 cgatcggaaa agtggtcgaa aatcttggaa taggagactt tgaacctgtt aatccgatcc 3781 aagcggctct cgctcaatta atgacttcta aaatacaggg aattaaagat caacaagcac 3841 cgatcgagat taatagatct gataatggct ttttcgctaa gaaacagtaa taattctttg 3901 actttttccg gtttagtgca atttatttaa ttactttact agaatccggc gaagcatggc 3961 gaagcgtaaa gcgaagcaac gaagaagatc taacggcgga ataagggttc tcaatgtcct 4021 tgaatcattg acatacgcgg agatcatatc acgcggcact actggcgggg gattgggaca 4081 actaattttc ggtgaaactg atcttggtat gaaacagatc gggattaaga ctcaatttta 4141 tgataatact gaaatggtcg cggtcgggga aggtcaaata tctcttggcg acatagtttc 4201 tcaaccatct caagcgatcg cagtaatgac ttctaatttc cagaagaacc tcatgcctat 4261 ggcagtcgcc ggattcacga catcgatcgg attccgcgtc ggcagatccc ttttaagacg 4321 cccaatctca aatataaatc gtaatttaat gcgtccgttg ttcggtaaat ctgtgaggct 4381 gtgatatt //