LOCUS       MN582101                2038 bp    DNA     circular ENV 18-NOV-2019
DEFINITION  Virus sp. ctgoX21, complete genome.
ACCESSION   MN582101
VERSION     MN582101.1
DBLINK      BioProject: PRJNA540674
            BioSample: SAMN11552893, SAMN11552892, SAMN11552894
            Sequence Read Archive: SRR8996939, SRR8996941, SRR8996944
KEYWORDS    ENV.
SOURCE      Virus sp. ctgoX21 (freshwater metagenome)
  ORGANISM  Virus sp. ctgoX21
            Viruses; unclassified viruses.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Malki,K. and Breitbart,M.
  TITLE     Florida's Freshwater Springs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Malki,K. and Breitbart,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2019) College of Marine Science, University of
            South Florida, 830 1st St S, Saint Petersburg, FL 33701, USA
COMMENT     Submissions were annotated with Cenote-Taker2 available at
            https://github.com/mtisza1/Cenote-Taker2.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.12
            Genome Coverage       :: 38.635427x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Virus sp. ctgoX21"
                     /mol_type="genomic DNA"
                     /isolate="ctgoX21"
                     /isolation_source="Volusia Spring"
                     /db_xref="taxon:2656731"
                     /environmental_sample
                     /country="USA"
                     /collection_date="22-May-2017"
                     /metagenome_source="freshwater metagenome"
                     /note="genome binned from sequencing reads available in
                     SRX5775735,SRX5775734,SRX5775731;
                     metagenomic"
     CDS             1..1002
                     /inference="protein motif:PFAM:PF01057.16"
                     /codon_start=1
                     /product="Rep protein"
                     /protein_id="QGH73298.1"
                     /translation="MSDLLTNLPTTVDDKFRLQAQRLMLTYKTHLDKDEFSEFLSRIK
                     PPKTLYIAHENGDDDPITPYEHTHVVIDFGTAFNNRNCRVFDFEGIHPHISKIQNKFD
                     WKRACTYVTKEDTTVELAEEDSFGVKKNSVLDIWRSRNISEALEGMSSLRDALPTIAI
                     FNHKPIELPQPELEESQFWYWQESCRDLIFTQPNNRSVIWVYDEVGGAGKTRFAEWAC
                     LTYPEKCTMFNQIGKVSDFAMNIRSEQLAGWRGDTCFINLSRDYSDKDHIYQALEMIK
                     DRFVTCTKYTGGKIWLPTMHVIVLANFPPMKHKLSKDRWEIYEIDPTEWSWIERSSG"
     CDS             complement(1114..1959)
                     /inference="protein motif:CDD:cd00259"
                     /note="Capsid protein; STNV domain"
                     /codon_start=1
                     /product="capsid protein"
                     /protein_id="QGH73299.1"
                     /translation="MYPRRKKYTPKPFVRRSQKPRTAPRRKYTSKKVIKRVVRAVVSR
                     QAEKKSVVYSSTLSLGTLQPTTSSLVGNYMVITPSQSSFGYTIAKGTDDNQRIGNQIN
                     IKTLRHTFVCIVNPYNATTNTQQRPCFIRFYYFKSKWSPVADVATGNVCGVNANFFDN
                     SSSDTGFSGALMDLTRKIQSQNYTYLCHRTFKIGNSQPAAGMATSSIQANQTSNDFKM
                     SMIGKVNLARFCKSKFTFNDANQVMNPWIHCLMQVMAADGSVISTTQSQVSIQSQIYC
                     EYTDE"
ORIGIN      
        1 atgtctgact tactaactaa tttacctact acagttgacg ataaatttcg tcttcaagcg
       61 caacgcttga tgttgactta caaaactcat ttagataaag atgagttttc agagtttctg
      121 tctcgcataa agccgcctaa aactctttat attgcacatg agaacggaga tgatgacccc
      181 atcactcctt atgaacatac tcatgttgtt attgatttcg gtactgcttt caacaaccga
      241 aattgtcgcg tatttgattt tgagggtatt caccctcata tttctaaaat tcaaaataaa
      301 tttgattgga agagagcttg tacatatgta actaaagaag atactactgt tgaacttgct
      361 gaagaagatt catttggtgt taaaaagaat tctgttttag atatttggag atctagaaat
      421 attagtgaag cactagaagg aatgagttct ttacgcgatg cgttacctac tatcgctatt
      481 tttaaccata aaccgattga attacctcaa ccggaacttg aagaatcgca gttttggtat
      541 tggcaagaat cttgtagaga tttgattttt actcaaccta ataacagatc tgtaatctgg
      601 gtatacgacg aggttggagg agctggtaaa accagatttg ctgaatgggc ttgcttaaca
      661 taccctgaaa agtgcacgat gttcaaccag attggaaaag tgtctgattt tgctatgaat
      721 atcagaagtg aacaattagc aggttggaga ggagacacct gctttattaa tttatctcgt
      781 gattactccg ataaagacca tatataccaa gcattggaaa tgataaaaga tagatttgta
      841 acttgtacta aatatactgg aggaaaaatt tggttaccta ctatgcacgt aattgtgctt
      901 gctaattttc ctcctatgaa acataaatta tctaaagata gatgggagat ttatgaaatt
      961 gatccgaccg agtggtcttg gatcgaacgt agttctggtt agacacccct gtaacattaa
     1021 atatacgggg tgtcattgga cgctacgctt gggcgctgcg cgcgggaaca ggaattgcga
     1081 tgctaaaaaa ataatatatt caattgaata tatttactca tctgtgtatt cacagtatat
     1141 ctgagattga atagaaacct gagattgtgt agtagagata actgaaccat ctgctgccat
     1201 tacttgcatt agacaatgaa tccatgggtt cattacttga ttagcatcat taaaagtaaa
     1261 ctttgattta caaaaacgtg ctagattaac cttaccaatc attgacattt tgaagtcatt
     1321 actagtctga ttggcttgaa tagatgatgt agccatacct gctgcaggct gagaatttcc
     1381 gatcttgaaa gttcggtgac acaaatatgt ataattctga ctctggattt ttcgtgttaa
     1441 atccattaga gccccagaga aacctgtgtc tgatgaagag ttatcaaaga aattagcatt
     1501 aactccgcaa acatttcctg ttgctacgtc tgctactgga gaccatttag atttaaaata
     1561 ataaaatctg ataaaacatg gtcgttgttg agtgtttgta gttgcgttgt atggattaac
     1621 gatacaaaca aaagtatgac ggagagtctt gatattgatc tgattaccaa tacgttgatt
     1681 gtcatcagta cctttggcaa tagtataacc aaatgaagat tgagatggtg taattaccat
     1741 atagttacca actaatgatg atgtcgttgg ttggagtgtt ccaagtgaca gtgtggatga
     1801 gtagaccacg ctctttttct cggcttgtct tgacaccact gctctgacga cacgcttgat
     1861 gaccttcttc gaggtgtatt ttctgcgcgg tgctgtacga ggcttctgag accttcgtac
     1921 aaatggttta ggagtatatt tcttacgtct gggatacata ttttttaata gaaatctgct
     1981 ctgagaaaaa tttgaataat tttttttatt ttcttgagag aaaaataata aataaaag
//