locus-tag class description VITFI_CDS0004 PF04381 Putative exonuclease, RdgC VITFI_CDS0013 PF13746 4Fe-4S dicluster domain VITFI_CDS0013 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VITFI_CDS0013 PF12801 4Fe-4S binding domain VITFI_CDS0016 PF00155 Aminotransferase class I and II VITFI_CDS0016 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS0020 PF04293 SpoVR like protein VITFI_CDS0021 PF04285 Protein of unknown function (DUF444) VITFI_CDS0022 PF06798 PrkA serine protein kinase C-terminal domain VITFI_CDS0022 PF08298 PrkA AAA domain VITFI_CDS0024 PF02195 ParB-like nuclease domain VITFI_CDS0024 PF17762 HTH domain found in ParB protein VITFI_CDS0026 PF01118 Semialdehyde dehydrogenase, NAD binding domain VITFI_CDS0027 PF13614 AAA domain VITFI_CDS0028 PF01810 LysE type translocator VITFI_CDS0029 PF02527 rRNA small subunit methyltransferase G VITFI_CDS0030 PF13932 GidA associated domain VITFI_CDS0030 PF01134 Glucose inhibited division protein A VITFI_CDS0033 PF03692 Putative zinc- or iron-chelating domain VITFI_CDS0036 PF00005 ABC transporter VITFI_CDS0036 PF03412 Peptidase C39 family VITFI_CDS0036 PF00664 ABC transporter transmembrane region VITFI_CDS0039 PF03472 Autoinducer binding domain VITFI_CDS0039 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS0041 PF12679 ABC-2 family transporter protein VITFI_CDS0042 PF00005 ABC transporter VITFI_CDS0043 PF00561 alpha/beta hydrolase fold VITFI_CDS0045 PF02798 Glutathione S-transferase, N-terminal domain VITFI_CDS0045 PF00043 Glutathione S-transferase, C-terminal domain VITFI_CDS0046 PF05726 Pirin C-terminal cupin domain VITFI_CDS0046 PF02678 Pirin VITFI_CDS0051 PF00005 ABC transporter VITFI_CDS0053 PF01297 Zinc-uptake complex component A periplasmic VITFI_CDS0054 PF00950 ABC 3 transport family VITFI_CDS0055 PF00005 ABC transporter VITFI_CDS0057 PF00849 RNA pseudouridylate synthase VITFI_CDS0060 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS0060 PF13185 GAF domain VITFI_CDS0061 PF01627 Hpt domain VITFI_CDS0061 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0061 PF00672 HAMP domain VITFI_CDS0061 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0061 PF00072 Response regulator receiver domain VITFI_CDS0061 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS0062 PF00072 Response regulator receiver domain VITFI_CDS0063 PF00300 Histidine phosphatase superfamily (branch 1) VITFI_CDS0065 PF02310 B12 binding domain VITFI_CDS0065 PF02607 B12 binding domain VITFI_CDS0065 PF02965 Vitamin B12 dependent methionine synthase, activation domain VITFI_CDS0065 PF00809 Pterin binding enzyme VITFI_CDS0065 PF02574 Homocysteine S-methyltransferase VITFI_CDS0068 PF02607 B12 binding domain VITFI_CDS0068 PF02574 Homocysteine S-methyltransferase VITFI_CDS0068 PF00809 Pterin binding enzyme VITFI_CDS0068 PF02310 B12 binding domain VITFI_CDS0068 PF02965 Vitamin B12 dependent methionine synthase, activation domain VITFI_CDS0070 PF00986 DNA gyrase B subunit, carboxyl terminus VITFI_CDS0070 PF00204 DNA gyrase B VITFI_CDS0070 PF18053 DNA gyrase B subunit insert domain VITFI_CDS0070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0070 PF01751 Toprim domain VITFI_CDS0071 PF00712 DNA polymerase III beta subunit, N-terminal domain VITFI_CDS0071 PF02768 DNA polymerase III beta subunit, C-terminal domain VITFI_CDS0071 PF02767 DNA polymerase III beta subunit, central domain VITFI_CDS0072 PF00308 Bacterial dnaA protein VITFI_CDS0072 PF08299 Bacterial dnaA protein helix-turn-helix VITFI_CDS0072 PF00308 Bacterial dnaA protein VITFI_CDS0072 PF08299 Bacterial dnaA protein helix-turn-helix VITFI_CDS0072 PF11638 DnaA N-terminal domain VITFI_CDS0072 PF11638 DnaA N-terminal domain VITFI_CDS0073 PF00468 Ribosomal protein L34 VITFI_CDS0074 PF00825 Ribonuclease P VITFI_CDS0075 PF01809 Putative membrane protein insertion efficiency factor VITFI_CDS0076 PF14849 YidC periplasmic domain VITFI_CDS0076 PF02096 60Kd inner membrane protein VITFI_CDS0077 PF10396 GTP-binding protein TrmE N-terminus VITFI_CDS0077 PF12631 MnmE helical domain VITFI_CDS0077 PF01926 50S ribosome-binding GTPase VITFI_CDS0079 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS0079 PF00069 Protein kinase domain VITFI_CDS0081 PF12728 Helix-turn-helix domain VITFI_CDS0082 PF17760 UvrA interaction domain VITFI_CDS0082 PF17755 UvrA DNA-binding domain VITFI_CDS0082 PF00005 ABC transporter VITFI_CDS0086 PF01555 DNA methylase VITFI_CDS0091 PF00893 Small Multidrug Resistance protein VITFI_CDS0092 PF00072 Response regulator receiver domain VITFI_CDS0092 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS0107 PF10124 Mu-like prophage major head subunit gpT VITFI_CDS0113 PF06074 Protein of unknown function (DUF935) VITFI_CDS0114 PF03237 Terminase-like family VITFI_CDS0128 PF04381 Putative exonuclease, RdgC VITFI_CDS0138 PF00962 Adenosine/AMP deaminase VITFI_CDS0139 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS0139 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS0139 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS0143 PF02608 ABC transporter substrate-binding protein PnrA-like VITFI_CDS0147 PF00005 ABC transporter VITFI_CDS0148 PF01979 Amidohydrolase family VITFI_CDS0150 PF01799 [2Fe-2S] binding domain VITFI_CDS0150 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS0151 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VITFI_CDS0151 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VITFI_CDS0153 PF01925 Sulfite exporter TauE/SafE VITFI_CDS0159 PF00005 ABC transporter VITFI_CDS0160 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS0160 PF00005 ABC transporter VITFI_CDS0161 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS0162 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS0165 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS0165 PF09820 Predicted AAA-ATPase VITFI_CDS0166 PF00072 Response regulator receiver domain VITFI_CDS0167 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0167 PF00672 HAMP domain VITFI_CDS0167 PF01627 Hpt domain VITFI_CDS0167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0167 PF00072 Response regulator receiver domain VITFI_CDS0168 PF04381 Putative exonuclease, RdgC VITFI_CDS0169 PF07517 SecA DEAD-like domain VITFI_CDS0169 PF01043 SecA preprotein cross-linking domain VITFI_CDS0169 PF07516 SecA Wing and Scaffold domain VITFI_CDS0169 PF02810 SEC-C motif VITFI_CDS0171 PF08525 Opacity-associated protein A N-terminal motif VITFI_CDS0171 PF01551 Peptidase family M23 VITFI_CDS0171 PF01476 LysM domain VITFI_CDS0173 PF04386 Stringent starvation protein B VITFI_CDS0174 PF02798 Glutathione S-transferase, N-terminal domain VITFI_CDS0174 PF00043 Glutathione S-transferase, C-terminal domain VITFI_CDS0175 PF02167 Cytochrome C1 family VITFI_CDS0176 PF00032 Cytochrome b(C-terminal)/b6/petD VITFI_CDS0176 PF00033 Cytochrome b/b6/petB VITFI_CDS0177 PF00355 Rieske [2Fe-2S] domain VITFI_CDS0177 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VITFI_CDS0178 PF01741 Large-conductance mechanosensitive channel, MscL VITFI_CDS0179 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VITFI_CDS0180 PF01784 NIF3 (NGG1p interacting factor 3) VITFI_CDS0181 PF17820 PDZ domain VITFI_CDS0181 PF13180 PDZ domain VITFI_CDS0182 PF00902 Sec-independent protein translocase protein (TatC) VITFI_CDS0183 PF02416 mttA/Hcf106 family VITFI_CDS0184 PF02416 mttA/Hcf106 family VITFI_CDS0185 PF01230 HIT domain VITFI_CDS0186 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VITFI_CDS0187 PF01502 Phosphoribosyl-AMP cyclohydrolase VITFI_CDS0189 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS0191 PF00696 Amino acid kinase family VITFI_CDS0193 PF00072 Response regulator receiver domain VITFI_CDS0193 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS0194 PF13360 PQQ-like domain VITFI_CDS0194 PF01011 PQQ enzyme repeat VITFI_CDS0197 PF03401 Tripartite tricarboxylate transporter family receptor VITFI_CDS0203 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VITFI_CDS0203 PF00749 tRNA synthetases class I (E and Q), catalytic domain VITFI_CDS0206 PF00375 Sodium:dicarboxylate symporter family VITFI_CDS0208 PF00691 OmpA family VITFI_CDS0210 PF13614 AAA domain VITFI_CDS0211 PF03776 Septum formation topological specificity factor MinE VITFI_CDS0212 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VITFI_CDS0213 PF03775 Septum formation inhibitor MinC, C-terminal domain VITFI_CDS0213 PF05209 Septum formation inhibitor MinC, N-terminal domain VITFI_CDS0214 PF01207 Dihydrouridine synthase (Dus) VITFI_CDS0215 PF05661 Protein of unknown function (DUF808) VITFI_CDS0216 PF01841 Transglutaminase-like superfamily VITFI_CDS0216 PF08379 Bacterial transglutaminase-like N-terminal region VITFI_CDS0217 PF14403 Circularly permuted ATP-grasp type 2 VITFI_CDS0217 PF04168 A predicted alpha-helical domain with a conserved ER motif. VITFI_CDS0220 PF14403 Circularly permuted ATP-grasp type 2 VITFI_CDS0224 PF00753 Metallo-beta-lactamase superfamily VITFI_CDS0224 PF03772 Competence protein VITFI_CDS0230 PF01494 FAD binding domain VITFI_CDS0231 PF00753 Metallo-beta-lactamase superfamily VITFI_CDS0234 PF03471 Transporter associated domain VITFI_CDS0234 PF01595 Cyclin M transmembrane N-terminal domain VITFI_CDS0234 PF00571 CBS domain VITFI_CDS0235 PF00149 Calcineurin-like phosphoesterase VITFI_CDS0238 PF00692 dUTPase VITFI_CDS0239 PF01323 DSBA-like thioredoxin domain VITFI_CDS0244 PF03831 PhnA domain VITFI_CDS0244 PF08274 PhnA Zinc-Ribbon VITFI_CDS0246 PF02386 Cation transport protein VITFI_CDS0247 PF02254 TrkA-N domain VITFI_CDS0247 PF02080 TrkA-C domain VITFI_CDS0249 PF00999 Sodium/hydrogen exchanger family VITFI_CDS0249 PF02254 TrkA-N domain VITFI_CDS0252 PF00550 Phosphopantetheine attachment site VITFI_CDS0252 PF00501 AMP-binding enzyme VITFI_CDS0252 PF00202 Aminotransferase class-III VITFI_CDS0252 PF02801 Beta-ketoacyl synthase, C-terminal domain VITFI_CDS0252 PF00109 Beta-ketoacyl synthase, N-terminal domain VITFI_CDS0252 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS0252 PF00668 Condensation domain VITFI_CDS0252 PF16197 Ketoacyl-synthetase C-terminal extension VITFI_CDS0253 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VITFI_CDS0253 PF03129 Anticodon binding domain VITFI_CDS0253 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VITFI_CDS0253 PF02824 TGS domain VITFI_CDS0254 PF05198 Translation initiation factor IF-3, N-terminal domain VITFI_CDS0254 PF00707 Translation initiation factor IF-3, C-terminal domain VITFI_CDS0255 PF01632 Ribosomal protein L35 VITFI_CDS0256 PF00453 Ribosomal protein L20 VITFI_CDS0257 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VITFI_CDS0257 PF01409 tRNA synthetases class II core domain (F) VITFI_CDS0258 PF03147 Ferredoxin-fold anticodon binding domain VITFI_CDS0258 PF01588 Putative tRNA binding domain VITFI_CDS0258 PF03484 tRNA synthetase B5 domain VITFI_CDS0258 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VITFI_CDS0258 PF03483 B3/4 domain VITFI_CDS0259 PF00216 Bacterial DNA-binding protein VITFI_CDS0263 PF00672 HAMP domain VITFI_CDS0263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0263 PF00072 Response regulator receiver domain VITFI_CDS0263 PF01627 Hpt domain VITFI_CDS0263 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS0263 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0264 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS0264 PF00072 Response regulator receiver domain VITFI_CDS0266 PF03358 NADPH-dependent FMN reductase VITFI_CDS0268 PF01965 DJ-1/PfpI family VITFI_CDS0268 PF12833 Helix-turn-helix domain VITFI_CDS0270 PF00342 Phosphoglucose isomerase VITFI_CDS0271 PF00923 Transaldolase/Fructose-6-phosphate aldolase VITFI_CDS0272 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VITFI_CDS0272 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VITFI_CDS0273 PF01418 Helix-turn-helix domain, rpiR family VITFI_CDS0273 PF01380 SIS domain VITFI_CDS0273 PF02685 Glucokinase VITFI_CDS0276 PF04333 MlaA lipoprotein VITFI_CDS0277 PF02470 MlaD protein VITFI_CDS0278 PF02405 Permease MlaE VITFI_CDS0279 PF00005 ABC transporter VITFI_CDS0280 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS0280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VITFI_CDS0281 PF00310 Glutamine amidotransferases class-II VITFI_CDS0281 PF04898 Glutamate synthase central domain VITFI_CDS0281 PF01645 Conserved region in glutamate synthase VITFI_CDS0281 PF01493 GXGXG motif VITFI_CDS0283 PF01761 3-dehydroquinate synthase VITFI_CDS0284 PF01202 Shikimate kinase VITFI_CDS0286 PF07660 Secretin and TonB N terminus short domain VITFI_CDS0286 PF03958 Bacterial type II/III secretion system short domain VITFI_CDS0286 PF00263 Bacterial type II and III secretion system protein VITFI_CDS0286 PF11741 AMIN domain VITFI_CDS0291 PF17092 Penicillin-binding protein OB-like domain VITFI_CDS0291 PF00905 Penicillin binding protein transpeptidase domain VITFI_CDS0291 PF00912 Transglycosylase VITFI_CDS0292 PF01491 Frataxin-like domain VITFI_CDS0294 PF00106 short chain dehydrogenase VITFI_CDS0297 PF00317 Ribonucleotide reductase, all-alpha domain VITFI_CDS0297 PF02867 Ribonucleotide reductase, barrel domain VITFI_CDS0297 PF03477 ATP cone domain VITFI_CDS0300 PF01590 GAF domain VITFI_CDS0300 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS0300 PF00158 Sigma-54 interaction domain VITFI_CDS0301 PF00171 Aldehyde dehydrogenase family VITFI_CDS0305 PF08411 Exonuclease C-terminal VITFI_CDS0305 PF00929 Exonuclease VITFI_CDS0306 PF10417 C-terminal domain of 1-Cys peroxiredoxin VITFI_CDS0306 PF00578 AhpC/TSA family VITFI_CDS0308 PF00384 Molybdopterin oxidoreductase VITFI_CDS0308 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VITFI_CDS0308 PF00037 4Fe-4S binding domain VITFI_CDS0308 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VITFI_CDS0308 PF01568 Molydopterin dinucleotide binding domain VITFI_CDS0309 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VITFI_CDS0309 PF10531 SLBB domain VITFI_CDS0309 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VITFI_CDS0311 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS0311 PF09820 Predicted AAA-ATPase VITFI_CDS0313 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS0313 PF13192 Thioredoxin domain VITFI_CDS0314 PF00400 WD domain, G-beta repeat VITFI_CDS0315 PF00400 WD domain, G-beta repeat VITFI_CDS0316 PF00155 Aminotransferase class I and II VITFI_CDS0318 PF13089 Polyphosphate kinase N-terminal domain VITFI_CDS0318 PF13090 Polyphosphate kinase C-terminal domain 2 VITFI_CDS0318 PF17941 Polyphosphate kinase C-terminal domain 1 VITFI_CDS0318 PF02503 Polyphosphate kinase middle domain VITFI_CDS0322 PF01568 Molydopterin dinucleotide binding domain VITFI_CDS0322 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VITFI_CDS0322 PF00384 Molybdopterin oxidoreductase VITFI_CDS0327 PF07687 Peptidase dimerisation domain VITFI_CDS0327 PF01546 Peptidase family M20/M25/M40 VITFI_CDS0328 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VITFI_CDS0328 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VITFI_CDS0329 PF02780 Transketolase, C-terminal domain VITFI_CDS0329 PF02779 Transketolase, pyrimidine binding domain VITFI_CDS0329 PF00456 Transketolase, thiamine diphosphate binding domain VITFI_CDS0331 PF02675 S-adenosylmethionine decarboxylase VITFI_CDS0333 PF00483 Nucleotidyl transferase VITFI_CDS0336 PF00300 Histidine phosphatase superfamily (branch 1) VITFI_CDS0337 PF00581 Rhodanese-like domain VITFI_CDS0338 PF00462 Glutaredoxin VITFI_CDS0339 PF02556 Preprotein translocase subunit SecB VITFI_CDS0340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VITFI_CDS0340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VITFI_CDS0341 PF00156 Phosphoribosyl transferase domain VITFI_CDS0342 PF08241 Methyltransferase domain VITFI_CDS0343 PF02630 SCO1/SenC VITFI_CDS0344 PF04542 Sigma-70 region 2 VITFI_CDS0344 PF00140 Sigma-70 factor, region 1.2 VITFI_CDS0344 PF04545 Sigma-70, region 4 VITFI_CDS0346 PF13533 Biotin-lipoyl like VITFI_CDS0347 PF00005 ABC transporter VITFI_CDS0347 PF00664 ABC transporter transmembrane region VITFI_CDS0348 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS0349 PF02018 Carbohydrate binding domain VITFI_CDS0349 PF02927 Cellulase N-terminal ig-like domain VITFI_CDS0349 PF00759 Glycosyl hydrolase family 9 VITFI_CDS0350 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS0351 PF03466 LysR substrate binding domain VITFI_CDS0351 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0353 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VITFI_CDS0357 PF00403 Heavy-metal-associated domain VITFI_CDS0368 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VITFI_CDS0368 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS0369 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS0369 PF01627 Hpt domain VITFI_CDS0369 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0369 PF00672 HAMP domain VITFI_CDS0369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0369 PF00072 Response regulator receiver domain VITFI_CDS0372 PF04216 Protein involved in formate dehydrogenase formation VITFI_CDS0373 PF02634 FdhD/NarQ family VITFI_CDS0374 PF01292 Prokaryotic cytochrome b561 VITFI_CDS0375 PF09163 Formate dehydrogenase N, transmembrane VITFI_CDS0375 PF13247 4Fe-4S dicluster domain VITFI_CDS0376 PF00384 Molybdopterin oxidoreductase VITFI_CDS0376 PF01568 Molydopterin dinucleotide binding domain VITFI_CDS0376 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VITFI_CDS0378 PF00072 Response regulator receiver domain VITFI_CDS0378 PF00158 Sigma-54 interaction domain VITFI_CDS0378 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS0379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0379 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0379 PF00989 PAS fold VITFI_CDS0382 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VITFI_CDS0383 PF00873 AcrB/AcrD/AcrF family VITFI_CDS0384 PF00210 Ferritin-like domain VITFI_CDS0387 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VITFI_CDS0387 PF01367 5'-3' exonuclease, C-terminal SAM fold VITFI_CDS0387 PF01612 3'-5' exonuclease VITFI_CDS0387 PF00476 DNA polymerase family A VITFI_CDS0388 PF01636 Phosphotransferase enzyme family VITFI_CDS0390 PF13188 PAS domain VITFI_CDS0390 PF03707 Bacterial signalling protein N terminal repeat VITFI_CDS0390 PF00563 EAL domain VITFI_CDS0390 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS0391 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS0392 PF00580 UvrD/REP helicase N-terminal domain VITFI_CDS0392 PF13361 UvrD-like helicase C-terminal domain VITFI_CDS0393 PF01434 Peptidase family M41 VITFI_CDS0393 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS0393 PF17862 AAA+ lid domain VITFI_CDS0395 PF00271 Helicase conserved C-terminal domain VITFI_CDS0395 PF00270 DEAD/DEAH box helicase VITFI_CDS0395 PF18019 HD domain VITFI_CDS0396 PF18019 HD domain VITFI_CDS0396 PF18395 Cas3 C-terminal domain VITFI_CDS0401 PF09344 CT1975-like protein VITFI_CDS0404 PF01867 CRISPR associated protein Cas1 VITFI_CDS0405 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) VITFI_CDS0409 PF01618 MotA/TolQ/ExbB proton channel family VITFI_CDS0410 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS0411 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS0416 PF00909 Ammonium Transporter Family VITFI_CDS0418 PF00920 Dehydratase family VITFI_CDS0419 PF01081 KDPG and KHG aldolase VITFI_CDS0423 PF03350 Uncharacterized protein family, UPF0114 VITFI_CDS0425 PF00149 Calcineurin-like phosphoesterase VITFI_CDS0426 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VITFI_CDS0426 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VITFI_CDS0427 PF03807 NADP oxidoreductase coenzyme F420-dependent VITFI_CDS0427 PF14748 Pyrroline-5-carboxylate reductase dimerisation VITFI_CDS0428 PF01040 UbiA prenyltransferase family VITFI_CDS0429 PF08240 Alcohol dehydrogenase GroES-like domain VITFI_CDS0429 PF00107 Zinc-binding dehydrogenase VITFI_CDS0431 PF02397 Bacterial sugar transferase VITFI_CDS0432 PF00483 Nucleotidyl transferase VITFI_CDS0432 PF01050 Mannose-6-phosphate isomerase VITFI_CDS0433 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VITFI_CDS0435 PF00483 Nucleotidyl transferase VITFI_CDS0436 PF04321 RmlD substrate binding domain VITFI_CDS0437 PF16363 GDP-mannose 4,6 dehydratase VITFI_CDS0438 PF00271 Helicase conserved C-terminal domain VITFI_CDS0438 PF00270 DEAD/DEAH box helicase VITFI_CDS0439 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS0440 PF02545 Maf-like protein VITFI_CDS0441 PF02620 Large ribosomal RNA subunit accumulation protein YceD VITFI_CDS0442 PF01783 Ribosomal L32p protein family VITFI_CDS0443 PF02504 Fatty acid synthesis protein VITFI_CDS0444 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VITFI_CDS0444 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VITFI_CDS0445 PF00698 Acyl transferase domain VITFI_CDS0447 PF00550 Phosphopantetheine attachment site VITFI_CDS0448 PF00109 Beta-ketoacyl synthase, N-terminal domain VITFI_CDS0448 PF02801 Beta-ketoacyl synthase, C-terminal domain VITFI_CDS0449 PF08281 Sigma-70, region 4 VITFI_CDS0449 PF04542 Sigma-70 region 2 VITFI_CDS0452 PF13180 PDZ domain VITFI_CDS0453 PF03144 Elongation factor Tu domain 2 VITFI_CDS0453 PF00679 Elongation factor G C-terminus VITFI_CDS0453 PF06421 GTP-binding protein LepA C-terminus VITFI_CDS0453 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS0454 PF10502 Signal peptidase, peptidase S26 VITFI_CDS0456 PF14622 Ribonuclease-III-like VITFI_CDS0456 PF00035 Double-stranded RNA binding motif VITFI_CDS0457 PF07650 KH domain VITFI_CDS0457 PF01926 50S ribosome-binding GTPase VITFI_CDS0458 PF02565 Recombination protein O C terminal VITFI_CDS0458 PF11967 Recombination protein O N terminal VITFI_CDS0459 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VITFI_CDS0460 PF01648 4'-phosphopantetheinyl transferase superfamily VITFI_CDS0463 PF00933 Glycosyl hydrolase family 3 N terminal domain VITFI_CDS0464 PF12111 Polyribonucleotide phosphorylase C terminal VITFI_CDS0464 PF10150 Ribonuclease E/G family VITFI_CDS0464 PF00575 S1 RNA binding domain VITFI_CDS0465 PF01479 S4 domain VITFI_CDS0465 PF00849 RNA pseudouridylate synthase VITFI_CDS0468 PF06965 Na+/H+ antiporter 1 VITFI_CDS0468 PF01343 Peptidase family S49 VITFI_CDS0469 PF02548 Ketopantoate hydroxymethyltransferase VITFI_CDS0470 PF02569 Pantoate-beta-alanine ligase VITFI_CDS0471 PF04055 Radical SAM superfamily VITFI_CDS0471 PF06968 Biotin and Thiamin Synthesis associated domain VITFI_CDS0472 PF02261 Aspartate decarboxylase VITFI_CDS0473 PF01794 Ferric reductase like transmembrane component VITFI_CDS0474 PF00174 Oxidoreductase molybdopterin binding domain VITFI_CDS0475 PF01738 Dienelactone hydrolase family VITFI_CDS0476 PF01578 Cytochrome C assembly protein VITFI_CDS0477 PF05140 ResB-like family VITFI_CDS0478 PF00034 Cytochrome c VITFI_CDS0479 PF01926 50S ribosome-binding GTPase VITFI_CDS0481 PF00118 TCP-1/cpn60 chaperonin family VITFI_CDS0482 PF00166 Chaperonin 10 Kd subunit VITFI_CDS0483 PF00152 tRNA synthetases class II (D, K and N) VITFI_CDS0483 PF01336 OB-fold nucleic acid binding domain VITFI_CDS0484 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VITFI_CDS0484 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VITFI_CDS0484 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VITFI_CDS0485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VITFI_CDS0485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VITFI_CDS0486 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS0489 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VITFI_CDS0490 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS0491 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VITFI_CDS0496 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VITFI_CDS0497 PF02397 Bacterial sugar transferase VITFI_CDS0498 PF02321 Outer membrane efflux protein VITFI_CDS0499 PF00873 AcrB/AcrD/AcrF family VITFI_CDS0500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VITFI_CDS0500 PF00529 HlyD membrane-fusion protein of T1SS VITFI_CDS0501 PF00529 HlyD membrane-fusion protein of T1SS VITFI_CDS0501 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VITFI_CDS0502 PF08361 MAATS-type transcriptional repressor, C-terminal region VITFI_CDS0502 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS0503 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VITFI_CDS0504 PF07730 Histidine kinase VITFI_CDS0504 PF13492 GAF domain VITFI_CDS0504 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0505 PF00072 Response regulator receiver domain VITFI_CDS0505 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS0506 PF12327 FtsZ family, C-terminal domain VITFI_CDS0506 PF00091 Tubulin/FtsZ family, GTPase domain VITFI_CDS0507 PF02491 SHS2 domain inserted in FTSA VITFI_CDS0508 PF08478 POTRA domain, FtsQ-type VITFI_CDS0508 PF03799 Cell division protein FtsQ VITFI_CDS0509 PF07478 D-ala D-ala ligase C-terminus VITFI_CDS0509 PF01820 D-ala D-ala ligase N-terminus VITFI_CDS0510 PF01225 Mur ligase family, catalytic domain VITFI_CDS0510 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS0510 PF08245 Mur ligase middle domain VITFI_CDS0511 PF04101 Glycosyltransferase family 28 C-terminal domain VITFI_CDS0511 PF03033 Glycosyltransferase family 28 N-terminal domain VITFI_CDS0512 PF01098 Cell cycle protein VITFI_CDS0513 PF08245 Mur ligase middle domain VITFI_CDS0513 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS0514 PF00953 Glycosyl transferase family 4 VITFI_CDS0514 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VITFI_CDS0515 PF01225 Mur ligase family, catalytic domain VITFI_CDS0515 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS0515 PF08245 Mur ligase middle domain VITFI_CDS0516 PF08245 Mur ligase middle domain VITFI_CDS0516 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS0517 PF03717 Penicillin-binding Protein dimerisation domain VITFI_CDS0517 PF00905 Penicillin binding protein transpeptidase domain VITFI_CDS0519 PF01795 MraW methylase family VITFI_CDS0520 PF07690 Major Facilitator Superfamily VITFI_CDS0522 PF02824 TGS domain VITFI_CDS0522 PF13291 ACT domain VITFI_CDS0522 PF04607 Region found in RelA / SpoT proteins VITFI_CDS0523 PF01192 RNA polymerase Rpb6 VITFI_CDS0524 PF00625 Guanylate kinase VITFI_CDS0525 PF08340 Domain of unknown function (DUF1732) VITFI_CDS0525 PF03755 YicC-like family, N-terminal region VITFI_CDS0526 PF00069 Protein kinase domain VITFI_CDS0526 PF03793 PASTA domain VITFI_CDS0528 PF03725 3' exoribonuclease family, domain 2 VITFI_CDS0528 PF01138 3' exoribonuclease family, domain 1 VITFI_CDS0529 PF01725 Ham1 family VITFI_CDS0531 PF04055 Radical SAM superfamily VITFI_CDS0531 PF06969 HemN C-terminal domain VITFI_CDS0534 PF01713 Smr domain VITFI_CDS0534 PF00488 MutS domain V VITFI_CDS0536 PF00677 Lumazine binding domain VITFI_CDS0537 PF04002 RadC-like JAB domain VITFI_CDS0538 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS0538 PF07840 FadR C-terminal domain VITFI_CDS0539 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS0540 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS0542 PF08402 TOBE domain VITFI_CDS0542 PF00005 ABC transporter VITFI_CDS0543 PF01177 Asp/Glu/Hydantoin racemase VITFI_CDS0544 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VITFI_CDS0545 PF02401 LytB protein VITFI_CDS0546 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VITFI_CDS0546 PF02403 Seryl-tRNA synthetase N-terminal domain VITFI_CDS0547 PF12419 SNF2 Helicase protein VITFI_CDS0547 PF00271 Helicase conserved C-terminal domain VITFI_CDS0547 PF00176 SNF2 family N-terminal domain VITFI_CDS0548 PF00589 Phage integrase family VITFI_CDS0548 PF13356 Arm DNA-binding domain VITFI_CDS0554 PF04851 Type III restriction enzyme, res subunit VITFI_CDS0554 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VITFI_CDS0554 PF00271 Helicase conserved C-terminal domain VITFI_CDS0554 PF08463 EcoEI R protein C-terminal VITFI_CDS0563 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS0563 PF00158 Sigma-54 interaction domain VITFI_CDS0563 PF00072 Response regulator receiver domain VITFI_CDS0564 PF00989 PAS fold VITFI_CDS0564 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0564 PF00672 HAMP domain VITFI_CDS0566 PF01189 16S rRNA methyltransferase RsmB/F VITFI_CDS0566 PF01029 NusB family VITFI_CDS0567 PF01227 GTP cyclohydrolase I VITFI_CDS0571 PF06508 Queuosine biosynthesis protein QueC VITFI_CDS0572 PF00171 Aldehyde dehydrogenase family VITFI_CDS0574 PF01751 Toprim domain VITFI_CDS0574 PF01131 DNA topoisomerase VITFI_CDS0577 PF02237 Biotin protein ligase C terminal domain VITFI_CDS0577 PF08279 HTH domain VITFI_CDS0577 PF03099 Biotin/lipoate A/B protein ligase family VITFI_CDS0581 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS0582 PF11844 Domain of unknown function (DUF3364) VITFI_CDS0582 PF00148 Nitrogenase component 1 type Oxidoreductase VITFI_CDS0583 PF00148 Nitrogenase component 1 type Oxidoreductase VITFI_CDS0584 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VITFI_CDS0587 PF00497 Bacterial extracellular solute-binding proteins, family 3 VITFI_CDS0593 PF02896 PEP-utilising enzyme, TIM barrel domain VITFI_CDS0593 PF00391 PEP-utilising enzyme, mobile domain VITFI_CDS0593 PF05524 PEP-utilising enzyme, N-terminal VITFI_CDS0595 PF00381 PTS HPr component phosphorylation site VITFI_CDS0597 PF00561 alpha/beta hydrolase fold VITFI_CDS0598 PF08534 Redoxin VITFI_CDS0599 PF00501 AMP-binding enzyme VITFI_CDS0599 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS0599 PF00668 Condensation domain VITFI_CDS0599 PF00550 Phosphopantetheine attachment site VITFI_CDS0600 PF00034 Cytochrome c VITFI_CDS0601 PF01116 Fructose-bisphosphate aldolase class-II VITFI_CDS0602 PF13419 Haloacid dehalogenase-like hydrolase VITFI_CDS0603 PF00456 Transketolase, thiamine diphosphate binding domain VITFI_CDS0603 PF02780 Transketolase, C-terminal domain VITFI_CDS0603 PF02779 Transketolase, pyrimidine binding domain VITFI_CDS0604 PF00485 Phosphoribulokinase / Uridine kinase family VITFI_CDS0605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VITFI_CDS0606 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS0606 PF17866 AAA lid domain VITFI_CDS0609 PF04233 Phage Mu protein F like protein VITFI_CDS0611 PF03237 Terminase-like family VITFI_CDS0640 PF04381 Putative exonuclease, RdgC VITFI_CDS0654 PF03237 Terminase-like family VITFI_CDS0655 PF06074 Protein of unknown function (DUF935) VITFI_CDS0661 PF10124 Mu-like prophage major head subunit gpT VITFI_CDS0676 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VITFI_CDS0677 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VITFI_CDS0678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0678 PF03466 LysR substrate binding domain VITFI_CDS0680 PF16363 GDP-mannose 4,6 dehydratase VITFI_CDS0683 PF00534 Glycosyl transferases group 1 VITFI_CDS0686 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS0688 PF13439 Glycosyltransferase Family 4 VITFI_CDS0688 PF00534 Glycosyl transferases group 1 VITFI_CDS0690 PF03808 Glycosyl transferase WecB/TagA/CpsF family VITFI_CDS0692 PF09721 Transmembrane exosortase (Exosortase_EpsH) VITFI_CDS0693 PF13614 AAA domain VITFI_CDS0697 PF13614 AAA domain VITFI_CDS0699 PF00535 Glycosyl transferase family 2 VITFI_CDS0700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS0701 PF02021 Uncharacterised protein family UPF0102 VITFI_CDS0702 PF13580 SIS domain VITFI_CDS0703 PF04972 BON domain VITFI_CDS0704 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VITFI_CDS0704 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VITFI_CDS0705 PF00437 Type II/IV secretion system protein VITFI_CDS0706 PF00437 Type II/IV secretion system protein VITFI_CDS0707 PF01168 Alanine racemase, N-terminal domain VITFI_CDS0708 PF00860 Permease family VITFI_CDS0710 PF00005 ABC transporter VITFI_CDS0710 PF00664 ABC transporter transmembrane region VITFI_CDS0710 PF03412 Peptidase C39 family VITFI_CDS0712 PF03466 LysR substrate binding domain VITFI_CDS0712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0714 PF03741 Integral membrane protein TerC family VITFI_CDS0718 PF00005 ABC transporter VITFI_CDS0718 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VITFI_CDS0719 PF12911 N-terminal TM domain of oligopeptide transport permease C VITFI_CDS0719 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS0721 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS0721 PF09820 Predicted AAA-ATPase VITFI_CDS0722 PF09820 Predicted AAA-ATPase VITFI_CDS0722 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS0724 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VITFI_CDS0727 PF02233 NAD(P) transhydrogenase beta subunit VITFI_CDS0729 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VITFI_CDS0730 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VITFI_CDS0730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VITFI_CDS0732 PF00293 NUDIX domain VITFI_CDS0736 PF13181 Tetratricopeptide repeat VITFI_CDS0736 PF01435 Peptidase family M48 VITFI_CDS0737 PF01967 MoaC family VITFI_CDS0738 PF15864 Protein glycosylation ligase VITFI_CDS0738 PF04932 O-Antigen ligase VITFI_CDS0738 PF11846 Virulence factor membrane-bound polymerase, C-terminal VITFI_CDS0742 PF00114 Pilin (bacterial filament) VITFI_CDS0742 PF07963 Prokaryotic N-terminal methylation motif VITFI_CDS0743 PF00498 FHA domain VITFI_CDS0745 PF03741 Integral membrane protein TerC family VITFI_CDS0746 PF02629 CoA binding domain VITFI_CDS0746 PF00549 CoA-ligase VITFI_CDS0747 PF08442 ATP-grasp domain VITFI_CDS0747 PF00549 CoA-ligase VITFI_CDS0749 PF02631 RecX family VITFI_CDS0750 PF00154 recA bacterial DNA recombination protein VITFI_CDS0751 PF00072 Response regulator receiver domain VITFI_CDS0751 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS0752 PF08521 Two-component sensor kinase N-terminal VITFI_CDS0752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0752 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0753 PF01098 Cell cycle protein VITFI_CDS0754 PF00905 Penicillin binding protein transpeptidase domain VITFI_CDS0754 PF03717 Penicillin-binding Protein dimerisation domain VITFI_CDS0758 PF02686 Glu-tRNAGln amidotransferase C subunit VITFI_CDS0759 PF01425 Amidase VITFI_CDS0760 PF02637 GatB domain VITFI_CDS0760 PF02934 GatB/GatE catalytic domain VITFI_CDS0761 PF00156 Phosphoribosyl transferase domain VITFI_CDS0762 PF03372 Endonuclease/Exonuclease/phosphatase family VITFI_CDS0763 PF00753 Metallo-beta-lactamase superfamily VITFI_CDS0765 PF13545 Crp-like helix-turn-helix domain VITFI_CDS0765 PF00027 Cyclic nucleotide-binding domain VITFI_CDS0767 PF07690 Major Facilitator Superfamily VITFI_CDS0773 PF04379 ApaG domain VITFI_CDS0775 PF00834 Ribulose-phosphate 3 epimerase family VITFI_CDS0776 PF13419 Haloacid dehalogenase-like hydrolase VITFI_CDS0777 PF00425 chorismate binding enzyme VITFI_CDS0777 PF04715 Anthranilate synthase component I, N terminal region VITFI_CDS0778 PF06470 SMC proteins Flexible Hinge Domain VITFI_CDS0778 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS0780 PF00117 Glutamine amidotransferase class-I VITFI_CDS0781 PF01212 Beta-eliminating lyase VITFI_CDS0782 PF00591 Glycosyl transferase family, a/b domain VITFI_CDS0782 PF02885 Glycosyl transferase family, helical bundle domain VITFI_CDS0783 PF00218 Indole-3-glycerol phosphate synthase VITFI_CDS0784 PF03167 Uracil DNA glycosylase superfamily VITFI_CDS0786 PF03144 Elongation factor Tu domain 2 VITFI_CDS0786 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS0786 PF03143 Elongation factor Tu C-terminal domain VITFI_CDS0788 PF00467 KOW motif VITFI_CDS0788 PF02357 Transcription termination factor nusG VITFI_CDS0789 PF03946 Ribosomal protein L11, N-terminal domain VITFI_CDS0789 PF00298 Ribosomal protein L11, RNA binding domain VITFI_CDS0790 PF00687 Ribosomal protein L1p/L10e family VITFI_CDS0792 PF00466 Ribosomal protein L10 VITFI_CDS0793 PF16320 Ribosomal protein L7/L12 dimerisation domain VITFI_CDS0793 PF00542 Ribosomal protein L7/L12 C-terminal domain VITFI_CDS0795 PF04561 RNA polymerase Rpb2, domain 2 VITFI_CDS0795 PF04565 RNA polymerase Rpb2, domain 3 VITFI_CDS0795 PF04560 RNA polymerase Rpb2, domain 7 VITFI_CDS0795 PF00562 RNA polymerase Rpb2, domain 6 VITFI_CDS0795 PF10385 RNA polymerase beta subunit external 1 domain VITFI_CDS0795 PF04563 RNA polymerase beta subunit VITFI_CDS0796 PF04997 RNA polymerase Rpb1, domain 1 VITFI_CDS0796 PF00623 RNA polymerase Rpb1, domain 2 VITFI_CDS0796 PF04998 RNA polymerase Rpb1, domain 5 VITFI_CDS0796 PF04983 RNA polymerase Rpb1, domain 3 VITFI_CDS0796 PF05000 RNA polymerase Rpb1, domain 4 VITFI_CDS0797 PF08543 Phosphomethylpyrimidine kinase VITFI_CDS0797 PF02581 Thiamine monophosphate synthase VITFI_CDS0798 PF05690 Thiazole biosynthesis protein ThiG VITFI_CDS0800 PF01266 FAD dependent oxidoreductase VITFI_CDS0801 PF01964 Radical SAM ThiC family VITFI_CDS0801 PF13667 ThiC-associated domain VITFI_CDS0804 PF07670 Nucleoside recognition VITFI_CDS0804 PF02421 Ferrous iron transport protein B VITFI_CDS0804 PF07664 Ferrous iron transport protein B C terminus VITFI_CDS0806 PF00672 HAMP domain VITFI_CDS0806 PF00072 Response regulator receiver domain VITFI_CDS0806 PF01627 Hpt domain VITFI_CDS0806 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0806 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS0807 PF03475 3-alpha domain VITFI_CDS0807 PF03473 MOSC domain VITFI_CDS0808 PF05685 Putative restriction endonuclease VITFI_CDS0809 PF03144 Elongation factor Tu domain 2 VITFI_CDS0809 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS0809 PF16658 Class II release factor RF3, C-terminal domain VITFI_CDS0811 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VITFI_CDS0814 PF03062 MBOAT, membrane-bound O-acyltransferase family VITFI_CDS0815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VITFI_CDS0819 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0819 PF01627 Hpt domain VITFI_CDS0819 PF00072 Response regulator receiver domain VITFI_CDS0819 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS0819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0819 PF00672 HAMP domain VITFI_CDS0821 PF03466 LysR substrate binding domain VITFI_CDS0821 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0822 PF00171 Aldehyde dehydrogenase family VITFI_CDS0825 PF13185 GAF domain VITFI_CDS0825 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS0826 PF02772 S-adenosylmethionine synthetase, central domain VITFI_CDS0826 PF00438 S-adenosylmethionine synthetase, N-terminal domain VITFI_CDS0826 PF02773 S-adenosylmethionine synthetase, C-terminal domain VITFI_CDS0829 PF03279 Bacterial lipid A biosynthesis acyltransferase VITFI_CDS0830 PF01678 Diaminopimelate epimerase VITFI_CDS0832 PF01266 FAD dependent oxidoreductase VITFI_CDS0835 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain VITFI_CDS0835 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain VITFI_CDS0839 PF10518 TAT (twin-arginine translocation) pathway signal sequence VITFI_CDS0839 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS0839 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding VITFI_CDS0843 PF01022 Bacterial regulatory protein, arsR family VITFI_CDS0844 PF02583 Metal-sensitive transcriptional repressor VITFI_CDS0846 PF00873 AcrB/AcrD/AcrF family VITFI_CDS0849 PF02130 Uncharacterized protein family UPF0054 VITFI_CDS0850 PF02562 PhoH-like protein VITFI_CDS0851 PF01330 RuvA N terminal domain VITFI_CDS0851 PF07499 RuvA, C-terminal domain VITFI_CDS0856 PF03150 Di-haem cytochrome c peroxidase VITFI_CDS0859 PF17864 RuvB AAA lid domain VITFI_CDS0859 PF05496 Holliday junction DNA helicase RuvB P-loop domain VITFI_CDS0859 PF05491 RuvB C-terminal winged helix domain VITFI_CDS0861 PF00672 HAMP domain VITFI_CDS0861 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VITFI_CDS0861 PF02743 Cache domain VITFI_CDS0862 PF01627 Hpt domain VITFI_CDS0862 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0862 PF01584 CheW-like domain VITFI_CDS0862 PF02895 Signal transducing histidine kinase, homodimeric domain VITFI_CDS0867 PF02515 CoA-transferase family III VITFI_CDS0868 PF00080 Copper/zinc superoxide dismutase (SODC) VITFI_CDS0870 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS0870 PF07724 AAA domain (Cdc48 subfamily) VITFI_CDS0870 PF17871 AAA lid domain VITFI_CDS0870 PF02861 Clp amino terminal domain, pathogenicity island component VITFI_CDS0870 PF10431 C-terminal, D2-small domain, of ClpB protein VITFI_CDS0873 PF03793 PASTA domain VITFI_CDS0873 PF00069 Protein kinase domain VITFI_CDS0882 PF04055 Radical SAM superfamily VITFI_CDS0882 PF13186 Iron-sulfur cluster-binding domain VITFI_CDS0886 PF13230 Glutamine amidotransferases class-II VITFI_CDS0890 PF00005 ABC transporter VITFI_CDS0891 PF01515 Phosphate acetyl/butaryl transferase VITFI_CDS0893 PF00027 Cyclic nucleotide-binding domain VITFI_CDS0893 PF13545 Crp-like helix-turn-helix domain VITFI_CDS0895 PF17755 UvrA DNA-binding domain VITFI_CDS0895 PF17760 UvrA interaction domain VITFI_CDS0900 PF02547 Queuosine biosynthesis protein VITFI_CDS0902 PF00034 Cytochrome c VITFI_CDS0903 PF01702 Queuine tRNA-ribosyltransferase VITFI_CDS0904 PF00005 ABC transporter VITFI_CDS0906 PF17092 Penicillin-binding protein OB-like domain VITFI_CDS0906 PF00912 Transglycosylase VITFI_CDS0906 PF00905 Penicillin binding protein transpeptidase domain VITFI_CDS0907 PF13417 Glutathione S-transferase, N-terminal domain VITFI_CDS0907 PF00043 Glutathione S-transferase, C-terminal domain VITFI_CDS0908 PF08328 Adenylosuccinate lyase C-terminal VITFI_CDS0908 PF00206 Lyase VITFI_CDS0909 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VITFI_CDS0910 PF01810 LysE type translocator VITFI_CDS0912 PF18073 Rubredoxin metal binding domain VITFI_CDS0916 PF09905 DNA-binding protein VF530 VITFI_CDS0921 PF13361 UvrD-like helicase C-terminal domain VITFI_CDS0921 PF00580 UvrD/REP helicase N-terminal domain VITFI_CDS0922 PF01380 SIS domain VITFI_CDS0923 PF01037 Lrp/AsnC ligand binding domain VITFI_CDS0923 PF13404 AsnC-type helix-turn-helix domain VITFI_CDS0925 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS0925 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS0925 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS0926 PF03063 Prismane/CO dehydrogenase family VITFI_CDS0928 PF01925 Sulfite exporter TauE/SafE VITFI_CDS0929 PF08241 Methyltransferase domain VITFI_CDS0930 PF00561 alpha/beta hydrolase fold VITFI_CDS0933 PF06123 Inner membrane protein CreD VITFI_CDS0934 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS0934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS0934 PF00672 HAMP domain VITFI_CDS0935 PF01914 MarC family integral membrane protein VITFI_CDS0936 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VITFI_CDS0939 PF01380 SIS domain VITFI_CDS0939 PF00571 CBS domain VITFI_CDS0940 PF00999 Sodium/hydrogen exchanger family VITFI_CDS0940 PF02080 TrkA-C domain VITFI_CDS0940 PF02254 TrkA-N domain VITFI_CDS0941 PF00436 Single-strand binding protein family VITFI_CDS0950 PF02607 B12 binding domain VITFI_CDS0950 PF13411 MerR HTH family regulatory protein VITFI_CDS0951 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS0955 PF09587 Bacterial capsule synthesis protein PGA_cap VITFI_CDS0957 PF03315 Serine dehydratase beta chain VITFI_CDS0957 PF03313 Serine dehydratase alpha chain VITFI_CDS0958 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS0959 PF05193 Peptidase M16 inactive domain VITFI_CDS0959 PF00675 Insulinase (Peptidase family M16) VITFI_CDS0961 PF02926 THUMP domain VITFI_CDS0961 PF01170 Putative RNA methylase family UPF0020 VITFI_CDS0962 PF00309 Sigma-54 factor, Activator interacting domain (AID) VITFI_CDS0962 PF04963 Sigma-54 factor, core binding domain VITFI_CDS0962 PF04552 Sigma-54, DNA binding domain VITFI_CDS0963 PF00005 ABC transporter VITFI_CDS0964 PF03968 OstA-like protein VITFI_CDS0966 PF05746 DALR anticodon binding domain VITFI_CDS0966 PF03485 Arginyl tRNA synthetase N terminal domain VITFI_CDS0966 PF00750 tRNA synthetases class I (R) VITFI_CDS0970 PF03466 LysR substrate binding domain VITFI_CDS0970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0972 PF01274 Malate synthase VITFI_CDS0973 PF02560 Cyanate lyase C-terminal domain VITFI_CDS0975 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS0976 PF17785 PUA-like domain VITFI_CDS0976 PF10672 S-adenosylmethionine-dependent methyltransferase VITFI_CDS0977 PF03033 Glycosyltransferase family 28 N-terminal domain VITFI_CDS0984 PF00034 Cytochrome c VITFI_CDS0985 PF00174 Oxidoreductase molybdopterin binding domain VITFI_CDS0990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS0990 PF03466 LysR substrate binding domain VITFI_CDS0992 PF01063 Amino-transferase class IV VITFI_CDS0995 PF02885 Glycosyl transferase family, helical bundle domain VITFI_CDS0996 PF00384 Molybdopterin oxidoreductase VITFI_CDS0996 PF01568 Molydopterin dinucleotide binding domain VITFI_CDS0996 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VITFI_CDS0998 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS0998 PF18267 Rubredoxin NAD+ reductase C-terminal domain VITFI_CDS0998 PF04324 BFD-like [2Fe-2S] binding domain VITFI_CDS0998 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VITFI_CDS0998 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VITFI_CDS0999 PF00069 Protein kinase domain VITFI_CDS0999 PF03793 PASTA domain VITFI_CDS1000 PF07690 Major Facilitator Superfamily VITFI_CDS1002 PF01758 Sodium Bile acid symporter family VITFI_CDS1003 PF01451 Low molecular weight phosphotyrosine protein phosphatase VITFI_CDS1004 PF01451 Low molecular weight phosphotyrosine protein phosphatase VITFI_CDS1007 PF00581 Rhodanese-like domain VITFI_CDS1007 PF00899 ThiF family VITFI_CDS1009 PF00873 AcrB/AcrD/AcrF family VITFI_CDS1015 PF01545 Cation efflux family VITFI_CDS1016 PF03824 High-affinity nickel-transport protein VITFI_CDS1017 PF01402 Ribbon-helix-helix protein, copG family VITFI_CDS1017 PF08753 NikR C terminal nickel binding domain VITFI_CDS1019 PF04055 Radical SAM superfamily VITFI_CDS1019 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VITFI_CDS1020 PF03099 Biotin/lipoate A/B protein ligase family VITFI_CDS1021 PF04359 Protein of unknown function (DUF493) VITFI_CDS1022 PF01063 Amino-transferase class IV VITFI_CDS1023 PF07943 Penicillin-binding protein 5, C-terminal domain VITFI_CDS1023 PF00768 D-alanyl-D-alanine carboxypeptidase VITFI_CDS1028 PF00490 Delta-aminolevulinic acid dehydratase VITFI_CDS1029 PF01544 CorA-like Mg2+ transporter protein VITFI_CDS1032 PF01925 Sulfite exporter TauE/SafE VITFI_CDS1033 PF08241 Methyltransferase domain VITFI_CDS1034 PF08534 Redoxin VITFI_CDS1037 PF10518 TAT (twin-arginine translocation) pathway signal sequence VITFI_CDS1037 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS1037 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding VITFI_CDS1040 PF03150 Di-haem cytochrome c peroxidase VITFI_CDS1040 PF00034 Cytochrome c VITFI_CDS1041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1041 PF03466 LysR substrate binding domain VITFI_CDS1042 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VITFI_CDS1042 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VITFI_CDS1043 PF00101 Ribulose bisphosphate carboxylase, small chain VITFI_CDS1057 PF10124 Mu-like prophage major head subunit gpT VITFI_CDS1064 PF06074 Protein of unknown function (DUF935) VITFI_CDS1065 PF03237 Terminase-like family VITFI_CDS1079 PF04381 Putative exonuclease, RdgC VITFI_CDS1088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1088 PF00672 HAMP domain VITFI_CDS1088 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1090 PF00884 Sulfatase VITFI_CDS1090 PF08019 Phosphoethanolamine transferase EptA/EptB VITFI_CDS1091 PF05159 Capsule polysaccharide biosynthesis protein VITFI_CDS1092 PF00459 Inositol monophosphatase family VITFI_CDS1093 PF01507 Phosphoadenosine phosphosulfate reductase family VITFI_CDS1094 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS1095 PF03600 Citrate transporter VITFI_CDS1095 PF02080 TrkA-C domain VITFI_CDS1096 PF00551 Formyl transferase VITFI_CDS1098 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VITFI_CDS1099 PF03330 Lytic transglycolase VITFI_CDS1099 PF05036 Sporulation related domain VITFI_CDS1100 PF08450 SMP-30/Gluconolactonase/LRE-like region VITFI_CDS1102 PF00119 ATP synthase A chain VITFI_CDS1103 PF00137 ATP synthase subunit C VITFI_CDS1104 PF00430 ATP synthase B/B' CF(0) VITFI_CDS1105 PF00213 ATP synthase delta (OSCP) subunit VITFI_CDS1106 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VITFI_CDS1106 PF02874 ATP synthase alpha/beta family, beta-barrel domain VITFI_CDS1106 PF00306 ATP synthase alpha/beta chain, C terminal domain VITFI_CDS1107 PF00231 ATP synthase VITFI_CDS1108 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VITFI_CDS1108 PF02874 ATP synthase alpha/beta family, beta-barrel domain VITFI_CDS1109 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VITFI_CDS1109 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VITFI_CDS1113 PF01208 Uroporphyrinogen decarboxylase (URO-D) VITFI_CDS1114 PF00270 DEAD/DEAH box helicase VITFI_CDS1114 PF00271 Helicase conserved C-terminal domain VITFI_CDS1114 PF17764 3′ DNA-binding domain (3′BD) VITFI_CDS1114 PF18074 Primosomal protein N C-terminal domain VITFI_CDS1114 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VITFI_CDS1115 PF00474 Sodium:solute symporter family VITFI_CDS1116 PF04341 Protein of unknown function, DUF485 VITFI_CDS1117 PF00580 UvrD/REP helicase N-terminal domain VITFI_CDS1117 PF13361 UvrD-like helicase C-terminal domain VITFI_CDS1119 PF02705 K+ potassium transporter VITFI_CDS1122 PF00909 Ammonium Transporter Family VITFI_CDS1123 PF00543 Nitrogen regulatory protein P-II VITFI_CDS1124 PF01078 Magnesium chelatase, subunit ChlI VITFI_CDS1124 PF13335 Magnesium chelatase, subunit ChlI C-terminal VITFI_CDS1125 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS1126 PF01078 Magnesium chelatase, subunit ChlI VITFI_CDS1126 PF13335 Magnesium chelatase, subunit ChlI C-terminal VITFI_CDS1130 PF01061 ABC-2 type transporter VITFI_CDS1131 PF00005 ABC transporter VITFI_CDS1133 PF10531 SLBB domain VITFI_CDS1133 PF02563 Polysaccharide biosynthesis/export protein VITFI_CDS1139 PF00793 DAHP synthetase I family VITFI_CDS1140 PF01923 Cobalamin adenosyltransferase VITFI_CDS1142 PF00072 Response regulator receiver domain VITFI_CDS1143 PF01584 CheW-like domain VITFI_CDS1143 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1143 PF01627 Hpt domain VITFI_CDS1143 PF07194 P2 response regulator binding domain VITFI_CDS1143 PF02895 Signal transducing histidine kinase, homodimeric domain VITFI_CDS1145 PF00005 ABC transporter VITFI_CDS1146 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1151 PF00501 AMP-binding enzyme VITFI_CDS1151 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS1152 PF01012 Electron transfer flavoprotein domain VITFI_CDS1152 PF00766 Electron transfer flavoprotein FAD-binding domain VITFI_CDS1153 PF01012 Electron transfer flavoprotein domain VITFI_CDS1154 PF01575 MaoC like domain VITFI_CDS1155 PF12806 Acetyl-CoA dehydrogenase C-terminal like VITFI_CDS1155 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS1155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS1155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS1156 PF00501 AMP-binding enzyme VITFI_CDS1156 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS1157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1157 PF13426 PAS domain VITFI_CDS1157 PF00072 Response regulator receiver domain VITFI_CDS1158 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1158 PF00072 Response regulator receiver domain VITFI_CDS1160 PF04480 Protein of unknown function (DUF559) VITFI_CDS1161 PF13545 Crp-like helix-turn-helix domain VITFI_CDS1161 PF00027 Cyclic nucleotide-binding domain VITFI_CDS1162 PF00501 AMP-binding enzyme VITFI_CDS1163 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS1163 PF00005 ABC transporter VITFI_CDS1164 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS1167 PF00005 ABC transporter VITFI_CDS1168 PF00501 AMP-binding enzyme VITFI_CDS1168 PF14535 AMP-binding enzyme C-terminal domain VITFI_CDS1169 PF00106 short chain dehydrogenase VITFI_CDS1170 PF00108 Thiolase, N-terminal domain VITFI_CDS1170 PF02803 Thiolase, C-terminal domain VITFI_CDS1171 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS1171 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS1171 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS1172 PF02515 CoA-transferase family III VITFI_CDS1175 PF01642 Methylmalonyl-CoA mutase VITFI_CDS1175 PF02310 B12 binding domain VITFI_CDS1177 PF03466 LysR substrate binding domain VITFI_CDS1177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1179 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS1179 PF17151 Periplasmic sensor domain VITFI_CDS1182 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VITFI_CDS1182 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VITFI_CDS1187 PF16200 C-terminal region of band_7 VITFI_CDS1187 PF01145 SPFH domain / Band 7 family VITFI_CDS1189 PF00156 Phosphoribosyl transferase domain VITFI_CDS1192 PF01810 LysE type translocator VITFI_CDS1199 PF01494 FAD binding domain VITFI_CDS1201 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS1201 PF00072 Response regulator receiver domain VITFI_CDS1202 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1202 PF00989 PAS fold VITFI_CDS1203 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS1204 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VITFI_CDS1205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VITFI_CDS1206 PF00579 tRNA synthetases class I (W and Y) VITFI_CDS1207 PF00892 EamA-like transporter family VITFI_CDS1209 PF00535 Glycosyl transferase family 2 VITFI_CDS1214 PF09335 SNARE associated Golgi protein VITFI_CDS1215 PF00842 Alanine racemase, C-terminal domain VITFI_CDS1215 PF01168 Alanine racemase, N-terminal domain VITFI_CDS1216 PF02913 FAD linked oxidases, C-terminal domain VITFI_CDS1216 PF01565 FAD binding domain VITFI_CDS1218 PF01523 Putative modulator of DNA gyrase VITFI_CDS1219 PF00155 Aminotransferase class I and II VITFI_CDS1221 PF09086 Domain of unknown function (DUF1924) VITFI_CDS1223 PF01292 Prokaryotic cytochrome b561 VITFI_CDS1224 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1224 PF00072 Response regulator receiver domain VITFI_CDS1225 PF08521 Two-component sensor kinase N-terminal VITFI_CDS1225 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1229 PF13439 Glycosyltransferase Family 4 VITFI_CDS1229 PF00534 Glycosyl transferases group 1 VITFI_CDS1230 PF01425 Amidase VITFI_CDS1232 PF04452 RNA methyltransferase VITFI_CDS1234 PF00501 AMP-binding enzyme VITFI_CDS1234 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS1235 PF00164 Ribosomal protein S12/S23 VITFI_CDS1236 PF00177 Ribosomal protein S7p/S5e VITFI_CDS1237 PF00679 Elongation factor G C-terminus VITFI_CDS1237 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS1237 PF14492 Elongation Factor G, domain II VITFI_CDS1237 PF03144 Elongation factor Tu domain 2 VITFI_CDS1237 PF03764 Elongation factor G, domain IV VITFI_CDS1238 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS1238 PF03144 Elongation factor Tu domain 2 VITFI_CDS1238 PF03143 Elongation factor Tu C-terminal domain VITFI_CDS1239 PF00338 Ribosomal protein S10p/S20e VITFI_CDS1240 PF00297 Ribosomal protein L3 VITFI_CDS1241 PF00573 Ribosomal protein L4/L1 family VITFI_CDS1242 PF00276 Ribosomal protein L23 VITFI_CDS1243 PF03947 Ribosomal Proteins L2, C-terminal domain VITFI_CDS1243 PF00181 Ribosomal Proteins L2, RNA binding domain VITFI_CDS1244 PF00203 Ribosomal protein S19 VITFI_CDS1245 PF00237 Ribosomal protein L22p/L17e VITFI_CDS1246 PF07650 KH domain VITFI_CDS1246 PF00189 Ribosomal protein S3, C-terminal domain VITFI_CDS1247 PF00252 Ribosomal protein L16p/L10e VITFI_CDS1248 PF00831 Ribosomal L29 protein VITFI_CDS1249 PF00366 Ribosomal protein S17 VITFI_CDS1250 PF08534 Redoxin VITFI_CDS1252 PF00238 Ribosomal protein L14p/L23e VITFI_CDS1253 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VITFI_CDS1254 PF00673 ribosomal L5P family C-terminus VITFI_CDS1254 PF00281 Ribosomal protein L5 VITFI_CDS1255 PF00253 Ribosomal protein S14p/S29e VITFI_CDS1256 PF00410 Ribosomal protein S8 VITFI_CDS1257 PF00347 Ribosomal protein L6 VITFI_CDS1258 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VITFI_CDS1259 PF00333 Ribosomal protein S5, N-terminal domain VITFI_CDS1259 PF03719 Ribosomal protein S5, C-terminal domain VITFI_CDS1260 PF00327 Ribosomal protein L30p/L7e VITFI_CDS1261 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VITFI_CDS1262 PF00344 SecY translocase VITFI_CDS1263 PF01176 Translation initiation factor 1A / IF-1 VITFI_CDS1264 PF00416 Ribosomal protein S13/S18 VITFI_CDS1265 PF00411 Ribosomal protein S11 VITFI_CDS1266 PF01479 S4 domain VITFI_CDS1266 PF00163 Ribosomal protein S4/S9 N-terminal domain VITFI_CDS1267 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VITFI_CDS1267 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VITFI_CDS1267 PF01000 RNA polymerase Rpb3/RpoA insert domain VITFI_CDS1268 PF01196 Ribosomal protein L17 VITFI_CDS1269 PF02683 Cytochrome C biogenesis protein transmembrane region VITFI_CDS1269 PF11412 Disulphide bond corrector protein DsbC VITFI_CDS1270 PF02699 Preprotein translocase subunit VITFI_CDS1271 PF02355 Protein export membrane protein VITFI_CDS1271 PF13721 SecD export protein N-terminal TM region VITFI_CDS1271 PF07549 SecD/SecF GG Motif VITFI_CDS1272 PF07549 SecD/SecF GG Motif VITFI_CDS1272 PF02355 Protein export membrane protein VITFI_CDS1274 PF04361 Protein of unknown function (DUF494) VITFI_CDS1275 PF02481 DNA recombination-mediator protein A VITFI_CDS1275 PF17782 DprA winged helix domain VITFI_CDS1277 PF01327 Polypeptide deformylase VITFI_CDS1278 PF02911 Formyl transferase, C-terminal domain VITFI_CDS1278 PF00551 Formyl transferase VITFI_CDS1279 PF01435 Peptidase family M48 VITFI_CDS1282 PF00162 Phosphoglycerate kinase VITFI_CDS1283 PF01515 Phosphate acetyl/butaryl transferase VITFI_CDS1283 PF00390 Malic enzyme, N-terminal domain VITFI_CDS1283 PF03949 Malic enzyme, NAD binding domain VITFI_CDS1284 PF00224 Pyruvate kinase, barrel domain VITFI_CDS1284 PF02887 Pyruvate kinase, alpha/beta domain VITFI_CDS1285 PF01116 Fructose-bisphosphate aldolase class-II VITFI_CDS1287 PF01259 SAICAR synthetase VITFI_CDS1289 PF00085 Thioredoxin VITFI_CDS1290 PF00731 AIR carboxylase VITFI_CDS1291 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VITFI_CDS1291 PF02222 ATP-grasp domain VITFI_CDS1292 PF03481 Putative GTP-binding controlling metal-binding VITFI_CDS1292 PF01300 Telomere recombination VITFI_CDS1295 PF04193 PQ loop repeat VITFI_CDS1296 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VITFI_CDS1297 PF00814 Glycoprotease family VITFI_CDS1298 PF00583 Acetyltransferase (GNAT) family VITFI_CDS1305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VITFI_CDS1305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VITFI_CDS1305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VITFI_CDS1310 PF03710 Glutamate-ammonia ligase adenylyltransferase VITFI_CDS1310 PF08335 GlnD PII-uridylyltransferase VITFI_CDS1311 PF00795 Carbon-nitrogen hydrolase VITFI_CDS1314 PF05025 RbsD / FucU transport protein family VITFI_CDS1315 PF00005 ABC transporter VITFI_CDS1316 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS1317 PF13407 Periplasmic binding protein domain VITFI_CDS1318 PF00294 pfkB family carbohydrate kinase VITFI_CDS1322 PF03466 LysR substrate binding domain VITFI_CDS1322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1323 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VITFI_CDS1323 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS1325 PF03547 Membrane transport protein VITFI_CDS1328 PF14579 Helix-hairpin-helix motif VITFI_CDS1328 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VITFI_CDS1328 PF11490 DNA polymerase III polC-type N-terminus II VITFI_CDS1328 PF00929 Exonuclease VITFI_CDS1328 PF07733 Bacterial DNA polymerase III alpha NTPase domain VITFI_CDS1328 PF02811 PHP domain VITFI_CDS1332 PF02222 ATP-grasp domain VITFI_CDS1334 PF03976 Polyphosphate kinase 2 (PPK2) VITFI_CDS1335 PF03976 Polyphosphate kinase 2 (PPK2) VITFI_CDS1337 PF08448 PAS fold VITFI_CDS1337 PF01739 CheR methyltransferase, SAM binding domain VITFI_CDS1337 PF01339 CheB methylesterase VITFI_CDS1337 PF03705 CheR methyltransferase, all-alpha domain VITFI_CDS1338 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1338 PF00989 PAS fold VITFI_CDS1338 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1339 PF00072 Response regulator receiver domain VITFI_CDS1339 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS1342 PF05221 S-adenosyl-L-homocysteine hydrolase VITFI_CDS1342 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain VITFI_CDS1344 PF00176 SNF2 family N-terminal domain VITFI_CDS1344 PF00271 Helicase conserved C-terminal domain VITFI_CDS1344 PF12419 SNF2 Helicase protein VITFI_CDS1345 PF01479 S4 domain VITFI_CDS1345 PF01728 FtsJ-like methyltransferase VITFI_CDS1346 PF02219 Methylenetetrahydrofolate reductase VITFI_CDS1348 PF03922 OmpW family VITFI_CDS1350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1350 PF03466 LysR substrate binding domain VITFI_CDS1355 PF00764 Arginosuccinate synthase VITFI_CDS1359 PF13439 Glycosyltransferase Family 4 VITFI_CDS1359 PF00534 Glycosyl transferases group 1 VITFI_CDS1360 PF14883 Hypothetical glycosyl hydrolase family 13 VITFI_CDS1360 PF01522 Polysaccharide deacetylase VITFI_CDS1365 PF01171 PP-loop family VITFI_CDS1366 PF12804 MobA-like NTP transferase domain VITFI_CDS1366 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS1372 PF00561 alpha/beta hydrolase fold VITFI_CDS1374 PF00106 short chain dehydrogenase VITFI_CDS1375 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation VITFI_CDS1375 PF01118 Semialdehyde dehydrogenase, NAD binding domain VITFI_CDS1376 PF07836 DmpG-like communication domain VITFI_CDS1376 PF00682 HMGL-like VITFI_CDS1377 PF01361 Tautomerase enzyme VITFI_CDS1379 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS1379 PF07729 FCD domain VITFI_CDS1380 PF02830 V4R domain VITFI_CDS1380 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS1380 PF00158 Sigma-54 interaction domain VITFI_CDS1380 PF06505 Activator of aromatic catabolism VITFI_CDS1381 PF06099 Phenol hydroxylase subunit VITFI_CDS1382 PF02332 Methane/Phenol/Toluene Hydroxylase VITFI_CDS1383 PF02406 MmoB/DmpM family VITFI_CDS1384 PF04945 YHS domain VITFI_CDS1384 PF02332 Methane/Phenol/Toluene Hydroxylase VITFI_CDS1385 PF04663 Phenol hydroxylase conserved region VITFI_CDS1386 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS1386 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS1386 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS1387 PF03466 LysR substrate binding domain VITFI_CDS1387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1388 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS1389 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VITFI_CDS1390 PF03928 Haem-degrading VITFI_CDS1391 PF00171 Aldehyde dehydrogenase family VITFI_CDS1392 PF02754 Cysteine-rich domain VITFI_CDS1392 PF13183 4Fe-4S dicluster domain VITFI_CDS1393 PF01565 FAD binding domain VITFI_CDS1394 PF02913 FAD linked oxidases, C-terminal domain VITFI_CDS1394 PF01565 FAD binding domain VITFI_CDS1401 PF01521 Iron-sulphur cluster biosynthesis VITFI_CDS1404 PF00380 Ribosomal protein S9/S16 VITFI_CDS1405 PF00572 Ribosomal protein L13 VITFI_CDS1407 PF01636 Phosphotransferase enzyme family VITFI_CDS1409 PF00270 DEAD/DEAH box helicase VITFI_CDS1409 PF00271 Helicase conserved C-terminal domain VITFI_CDS1409 PF17191 RecG wedge domain VITFI_CDS1410 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1411 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1412 PF00005 ABC transporter VITFI_CDS1412 PF17850 CysA C-terminal regulatory domain VITFI_CDS1412 PF12857 TOBE-like domain VITFI_CDS1413 PF14338 Mrr N-terminal domain VITFI_CDS1413 PF04471 Restriction endonuclease VITFI_CDS1414 PF17191 RecG wedge domain VITFI_CDS1414 PF13749 Putative ATP-dependent DNA helicase recG C-terminal VITFI_CDS1414 PF00270 DEAD/DEAH box helicase VITFI_CDS1416 PF00271 Helicase conserved C-terminal domain VITFI_CDS1416 PF00270 DEAD/DEAH box helicase VITFI_CDS1416 PF03880 DbpA RNA binding domain VITFI_CDS1417 PF00881 Nitroreductase family VITFI_CDS1418 PF03466 LysR substrate binding domain VITFI_CDS1418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1420 PF03459 TOBE domain VITFI_CDS1423 PF18407 GCN5-related N-acetyltransferase like domain VITFI_CDS1423 PF13344 Haloacid dehalogenase-like hydrolase VITFI_CDS1424 PF01544 CorA-like Mg2+ transporter protein VITFI_CDS1425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VITFI_CDS1426 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VITFI_CDS1427 PF02603 HPr Serine kinase N terminus VITFI_CDS1427 PF07475 HPr Serine kinase C-terminal domain VITFI_CDS1428 PF01475 Ferric uptake regulator family VITFI_CDS1429 PF04355 SmpA / OmlA family VITFI_CDS1431 PF01618 MotA/TolQ/ExbB proton channel family VITFI_CDS1432 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS1433 PF13603 Leucyl-tRNA synthetase, Domain 2 VITFI_CDS1433 PF00133 tRNA synthetases class I (I, L, M and V) VITFI_CDS1433 PF09334 tRNA synthetases class I (M) VITFI_CDS1433 PF08264 Anticodon-binding domain of tRNA VITFI_CDS1436 PF00994 Probable molybdopterin binding domain VITFI_CDS1436 PF18146 Damage-inducible protein CinA KH domain VITFI_CDS1436 PF02464 Competence-damaged protein VITFI_CDS1437 PF04608 Phosphatidylglycerophosphatase A VITFI_CDS1438 PF00586 AIR synthase related protein, N-terminal domain VITFI_CDS1438 PF02769 AIR synthase related protein, C-terminal domain VITFI_CDS1439 PF00271 Helicase conserved C-terminal domain VITFI_CDS1439 PF00270 DEAD/DEAH box helicase VITFI_CDS1443 PF13289 SIR2-like domain VITFI_CDS1445 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS1445 PF00072 Response regulator receiver domain VITFI_CDS1446 PF00989 PAS fold VITFI_CDS1446 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1446 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1447 PF00390 Malic enzyme, N-terminal domain VITFI_CDS1447 PF03949 Malic enzyme, NAD binding domain VITFI_CDS1447 PF01515 Phosphate acetyl/butaryl transferase VITFI_CDS1448 PF00545 ribonuclease VITFI_CDS1451 PF00398 Ribosomal RNA adenine dimethylase VITFI_CDS1452 PF09312 SurA N-terminal domain VITFI_CDS1452 PF00639 PPIC-type PPIASE domain VITFI_CDS1453 PF04453 LPS transport system D VITFI_CDS1454 PF01636 Phosphotransferase enzyme family VITFI_CDS1455 PF01966 HD domain VITFI_CDS1455 PF12627 Probable RNA and SrmB- binding site of polymerase A VITFI_CDS1455 PF01743 Poly A polymerase head domain VITFI_CDS1457 PF10145 Phage-related minor tail protein VITFI_CDS1457 PF01464 Transglycosylase SLT domain VITFI_CDS1457 PF01551 Peptidase family M23 VITFI_CDS1459 PF01553 Acyltransferase VITFI_CDS1461 PF05746 DALR anticodon binding domain VITFI_CDS1461 PF02092 Glycyl-tRNA synthetase beta subunit VITFI_CDS1462 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS1463 PF02091 Glycyl-tRNA synthetase alpha subunit VITFI_CDS1464 PF00795 Carbon-nitrogen hydrolase VITFI_CDS1465 PF03471 Transporter associated domain VITFI_CDS1465 PF00571 CBS domain VITFI_CDS1466 PF02492 CobW/HypB/UreG, nucleotide-binding domain VITFI_CDS1466 PF07683 Cobalamin synthesis protein cobW C-terminal domain VITFI_CDS1467 PF01258 Prokaryotic dksA/traR C4-type zinc finger VITFI_CDS1469 PF00227 Proteasome subunit VITFI_CDS1470 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS1470 PF07724 AAA domain (Cdc48 subfamily) VITFI_CDS1474 PF03401 Tripartite tricarboxylate transporter family receptor VITFI_CDS1475 PF02580 D-Tyr-tRNA(Tyr) deacylase VITFI_CDS1476 PF01545 Cation efflux family VITFI_CDS1476 PF16916 Dimerisation domain of Zinc Transporter VITFI_CDS1477 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VITFI_CDS1477 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VITFI_CDS1479 PF03702 Anhydro-N-acetylmuramic acid kinase VITFI_CDS1480 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS1480 PF00072 Response regulator receiver domain VITFI_CDS1481 PF00072 Response regulator receiver domain VITFI_CDS1481 PF09456 RcsC Alpha-Beta-Loop (ABL) VITFI_CDS1481 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1481 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1483 PF00270 DEAD/DEAH box helicase VITFI_CDS1483 PF00271 Helicase conserved C-terminal domain VITFI_CDS1483 PF00570 HRDC domain VITFI_CDS1483 PF16124 RecQ zinc-binding VITFI_CDS1483 PF09382 RQC domain VITFI_CDS1485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1485 PF00183 Hsp90 protein VITFI_CDS1489 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VITFI_CDS1489 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VITFI_CDS1490 PF00374 Nickel-dependent hydrogenase VITFI_CDS1491 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VITFI_CDS1492 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VITFI_CDS1493 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VITFI_CDS1493 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VITFI_CDS1500 PF00962 Adenosine/AMP deaminase VITFI_CDS1502 PF03309 Type III pantothenate kinase VITFI_CDS1505 PF04539 Sigma-70 region 3 VITFI_CDS1505 PF04545 Sigma-70, region 4 VITFI_CDS1505 PF04542 Sigma-70 region 2 VITFI_CDS1506 PF00108 Thiolase, N-terminal domain VITFI_CDS1506 PF02803 Thiolase, C-terminal domain VITFI_CDS1516 PF04381 Putative exonuclease, RdgC VITFI_CDS1530 PF03237 Terminase-like family VITFI_CDS1531 PF06074 Protein of unknown function (DUF935) VITFI_CDS1537 PF10124 Mu-like prophage major head subunit gpT VITFI_CDS1554 PF02608 ABC transporter substrate-binding protein PnrA-like VITFI_CDS1557 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VITFI_CDS1561 PF01252 Signal peptidase (SPase) II VITFI_CDS1563 PF00133 tRNA synthetases class I (I, L, M and V) VITFI_CDS1563 PF08264 Anticodon-binding domain of tRNA VITFI_CDS1563 PF06827 Zinc finger found in FPG and IleRS VITFI_CDS1565 PF01687 Riboflavin kinase VITFI_CDS1565 PF06574 FAD synthetase VITFI_CDS1566 PF00849 RNA pseudouridylate synthase VITFI_CDS1566 PF01479 S4 domain VITFI_CDS1568 PF01553 Acyltransferase VITFI_CDS1568 PF00501 AMP-binding enzyme VITFI_CDS1575 PF01593 Flavin containing amine oxidoreductase VITFI_CDS1579 PF11870 Domain of unknown function (DUF3390) VITFI_CDS1579 PF13183 4Fe-4S dicluster domain VITFI_CDS1579 PF02589 LUD domain VITFI_CDS1580 PF02589 LUD domain VITFI_CDS1582 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS1582 PF07729 FCD domain VITFI_CDS1583 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS1585 PF05552 Conserved TM helix VITFI_CDS1585 PF00924 Mechanosensitive ion channel VITFI_CDS1586 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS1587 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VITFI_CDS1587 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VITFI_CDS1587 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VITFI_CDS1588 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS1593 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS1593 PF09820 Predicted AAA-ATPase VITFI_CDS1594 PF09820 Predicted AAA-ATPase VITFI_CDS1594 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS1595 PF09820 Predicted AAA-ATPase VITFI_CDS1595 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS1596 PF01202 Shikimate kinase VITFI_CDS1599 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS1599 PF00501 AMP-binding enzyme VITFI_CDS1602 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS1604 PF00005 ABC transporter VITFI_CDS1604 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS1605 PF00005 ABC transporter VITFI_CDS1606 PF02803 Thiolase, C-terminal domain VITFI_CDS1606 PF00108 Thiolase, N-terminal domain VITFI_CDS1608 PF02803 Thiolase, C-terminal domain VITFI_CDS1608 PF00108 Thiolase, N-terminal domain VITFI_CDS1609 PF03600 Citrate transporter VITFI_CDS1612 PF02594 Uncharacterised ACR, YggU family COG1872 VITFI_CDS1616 PF00583 Acetyltransferase (GNAT) family VITFI_CDS1616 PF13380 CoA binding domain VITFI_CDS1616 PF13607 Succinyl-CoA ligase like flavodoxin domain VITFI_CDS1619 PF16527 Two-component sensor protein CpxA, periplasmic domain VITFI_CDS1619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1619 PF00672 HAMP domain VITFI_CDS1619 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1620 PF00072 Response regulator receiver domain VITFI_CDS1620 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1622 PF00817 impB/mucB/samB family VITFI_CDS1622 PF11799 impB/mucB/samB family C-terminal domain VITFI_CDS1623 PF04304 Protein of unknown function (DUF454) VITFI_CDS1625 PF01070 FMN-dependent dehydrogenase VITFI_CDS1627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1627 PF03466 LysR substrate binding domain VITFI_CDS1629 PF00266 Aminotransferase class-V VITFI_CDS1630 PF01592 NifU-like N terminal domain VITFI_CDS1631 PF01521 Iron-sulphur cluster biosynthesis VITFI_CDS1632 PF01521 Iron-sulphur cluster biosynthesis VITFI_CDS1633 PF00012 Hsp70 protein VITFI_CDS1634 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS1636 PF00682 HMGL-like VITFI_CDS1637 PF03206 Nitrogen fixation protein NifW VITFI_CDS1638 PF01012 Electron transfer flavoprotein domain VITFI_CDS1639 PF01012 Electron transfer flavoprotein domain VITFI_CDS1639 PF00766 Electron transfer flavoprotein FAD-binding domain VITFI_CDS1640 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS1644 PF01590 GAF domain VITFI_CDS1644 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS1644 PF00158 Sigma-54 interaction domain VITFI_CDS1645 PF01943 Polysaccharide biosynthesis protein VITFI_CDS1647 PF02579 Dinitrogenase iron-molybdenum cofactor VITFI_CDS1647 PF04055 Radical SAM superfamily VITFI_CDS1648 PF00037 4Fe-4S binding domain VITFI_CDS1651 PF05484 LRV protein FeS4 cluster VITFI_CDS1651 PF01816 Leucine rich repeat variant VITFI_CDS1652 PF04319 NifZ domain VITFI_CDS1655 PF00266 Aminotransferase class-V VITFI_CDS1656 PF06988 NifT/FixU protein VITFI_CDS1658 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VITFI_CDS1663 PF12627 Probable RNA and SrmB- binding site of polymerase A VITFI_CDS1663 PF01743 Poly A polymerase head domain VITFI_CDS1663 PF01966 HD domain VITFI_CDS1672 PF03960 ArsC family VITFI_CDS1674 PF03747 ADP-ribosylglycohydrolase VITFI_CDS1675 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) VITFI_CDS1676 PF13361 UvrD-like helicase C-terminal domain VITFI_CDS1676 PF00580 UvrD/REP helicase N-terminal domain VITFI_CDS1680 PF02609 Exonuclease VII small subunit VITFI_CDS1681 PF00348 Polyprenyl synthetase VITFI_CDS1682 PF02780 Transketolase, C-terminal domain VITFI_CDS1682 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VITFI_CDS1682 PF02779 Transketolase, pyrimidine binding domain VITFI_CDS1683 PF02649 Type I GTP cyclohydrolase folE2 VITFI_CDS1684 PF00202 Aminotransferase class-III VITFI_CDS1689 PF05567 Neisseria PilC beta-propeller domain VITFI_CDS1691 PF03477 ATP cone domain VITFI_CDS1692 PF00464 Serine hydroxymethyltransferase VITFI_CDS1694 PF01464 Transglycosylase SLT domain VITFI_CDS1694 PF14718 Soluble lytic murein transglycosylase L domain VITFI_CDS1695 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VITFI_CDS1697 PF01625 Peptide methionine sulfoxide reductase VITFI_CDS1699 PF00593 TonB dependent receptor VITFI_CDS1699 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS1700 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VITFI_CDS1700 PF01243 Pyridoxamine 5'-phosphate oxidase VITFI_CDS1701 PF04972 BON domain VITFI_CDS1701 PF00691 OmpA family VITFI_CDS1702 PF12804 MobA-like NTP transferase domain VITFI_CDS1703 PF10609 NUBPL iron-transfer P-loop NTPase VITFI_CDS1705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS1705 PF03466 LysR substrate binding domain VITFI_CDS1706 PF00202 Aminotransferase class-III VITFI_CDS1707 PF01979 Amidohydrolase family VITFI_CDS1708 PF00563 EAL domain VITFI_CDS1708 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS1708 PF03707 Bacterial signalling protein N terminal repeat VITFI_CDS1711 PF00849 RNA pseudouridylate synthase VITFI_CDS1712 PF02616 Segregation and condensation protein ScpA VITFI_CDS1714 PF01928 CYTH domain VITFI_CDS1717 PF11412 Disulphide bond corrector protein DsbC VITFI_CDS1717 PF02683 Cytochrome C biogenesis protein transmembrane region VITFI_CDS1722 PF00578 AhpC/TSA family VITFI_CDS1723 PF11842 Domain of unknown function (DUF3362) VITFI_CDS1723 PF04055 Radical SAM superfamily VITFI_CDS1723 PF08497 Radical SAM N-terminal VITFI_CDS1725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VITFI_CDS1727 PF00491 Arginase family VITFI_CDS1729 PF00899 ThiF family VITFI_CDS1730 PF03572 Peptidase family S41 VITFI_CDS1730 PF13180 PDZ domain VITFI_CDS1731 PF08402 TOBE domain VITFI_CDS1731 PF00005 ABC transporter VITFI_CDS1734 PF00916 Sulfate permease family VITFI_CDS1734 PF01740 STAS domain VITFI_CDS1735 PF01588 Putative tRNA binding domain VITFI_CDS1735 PF09334 tRNA synthetases class I (M) VITFI_CDS1736 PF01730 UreF VITFI_CDS1737 PF02492 CobW/HypB/UreG, nucleotide-binding domain VITFI_CDS1738 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VITFI_CDS1738 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VITFI_CDS1739 PF01467 Cytidylyltransferase-like VITFI_CDS1745 PF00239 Resolvase, N terminal domain VITFI_CDS1745 PF02796 Helix-turn-helix domain of resolvase VITFI_CDS1746 PF02321 Outer membrane efflux protein VITFI_CDS1748 PF00005 ABC transporter VITFI_CDS1752 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS1754 PF02814 UreE urease accessory protein, N-terminal domain VITFI_CDS1754 PF05194 UreE urease accessory protein, C-terminal domain VITFI_CDS1756 PF01979 Amidohydrolase family VITFI_CDS1756 PF00449 Urease alpha-subunit, N-terminal domain VITFI_CDS1757 PF00699 Urease beta subunit VITFI_CDS1758 PF00547 Urease, gamma subunit VITFI_CDS1759 PF00128 Alpha amylase, catalytic domain VITFI_CDS1760 PF02806 Alpha amylase, C-terminal all-beta domain VITFI_CDS1760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VITFI_CDS1760 PF00128 Alpha amylase, catalytic domain VITFI_CDS1761 PF00128 Alpha amylase, catalytic domain VITFI_CDS1761 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VITFI_CDS1762 PF00483 Nucleotidyl transferase VITFI_CDS1763 PF08323 Starch synthase catalytic domain VITFI_CDS1763 PF00534 Glycosyl transferases group 1 VITFI_CDS1764 PF00343 Carbohydrate phosphorylase VITFI_CDS1766 PF04397 LytTr DNA-binding domain VITFI_CDS1766 PF00072 Response regulator receiver domain VITFI_CDS1767 PF07694 5TMR of 5TMR-LYT VITFI_CDS1767 PF06580 Histidine kinase VITFI_CDS1767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1773 PF00005 ABC transporter VITFI_CDS1776 PF01814 Hemerythrin HHE cation binding domain VITFI_CDS1777 PF05872 Bacterial protein of unknown function (DUF853) VITFI_CDS1778 PF01709 Transcriptional regulator VITFI_CDS1779 PF02844 Phosphoribosylglycinamide synthetase, N domain VITFI_CDS1779 PF02843 Phosphoribosylglycinamide synthetase, C domain VITFI_CDS1779 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VITFI_CDS1780 PF01218 Coproporphyrinogen III oxidase VITFI_CDS1781 PF01467 Cytidylyltransferase-like VITFI_CDS1783 PF02590 Predicted SPOUT methyltransferase VITFI_CDS1785 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS1788 PF02545 Maf-like protein VITFI_CDS1789 PF10150 Ribonuclease E/G family VITFI_CDS1789 PF00575 S1 RNA binding domain VITFI_CDS1790 PF04052 TolB amino-terminal domain VITFI_CDS1790 PF07676 WD40-like Beta Propeller Repeat VITFI_CDS1791 PF00691 OmpA family VITFI_CDS1793 PF00899 ThiF family VITFI_CDS1794 PF03960 ArsC family VITFI_CDS1795 PF02541 Ppx/GppA phosphatase family VITFI_CDS1797 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1797 PF00072 Response regulator receiver domain VITFI_CDS1798 PF01975 Survival protein SurE VITFI_CDS1800 PF01551 Peptidase family M23 VITFI_CDS1800 PF01476 LysM domain VITFI_CDS1801 PF01938 TRAM domain VITFI_CDS1801 PF05958 tRNA (Uracil-5-)-methyltransferase VITFI_CDS1802 PF01027 Inhibitor of apoptosis-promoting Bax1 VITFI_CDS1808 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VITFI_CDS1808 PF00117 Glutamine amidotransferase class-I VITFI_CDS1809 PF01810 LysE type translocator VITFI_CDS1810 PF02142 MGS-like domain VITFI_CDS1810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VITFI_CDS1810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VITFI_CDS1811 PF03449 Transcription elongation factor, N-terminal VITFI_CDS1811 PF01272 Transcription elongation factor, GreA/GreB, C-term VITFI_CDS1814 PF01728 FtsJ-like methyltransferase VITFI_CDS1815 PF17862 AAA+ lid domain VITFI_CDS1815 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS1815 PF06480 FtsH Extracellular VITFI_CDS1815 PF01434 Peptidase family M41 VITFI_CDS1816 PF00809 Pterin binding enzyme VITFI_CDS1817 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VITFI_CDS1817 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VITFI_CDS1817 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VITFI_CDS1817 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VITFI_CDS1818 PF12849 PBP superfamily domain VITFI_CDS1819 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1820 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1821 PF00005 ABC transporter VITFI_CDS1822 PF01895 PhoU domain VITFI_CDS1823 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1823 PF00072 Response regulator receiver domain VITFI_CDS1824 PF11808 Phosphate regulon sensor protein PhoR VITFI_CDS1824 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1824 PF00989 PAS fold VITFI_CDS1826 PF01197 Ribosomal protein L31 VITFI_CDS1827 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VITFI_CDS1827 PF07497 Rho termination factor, RNA-binding domain VITFI_CDS1827 PF07498 Rho termination factor, N-terminal domain VITFI_CDS1829 PF00085 Thioredoxin VITFI_CDS1831 PF00717 Peptidase S24-like VITFI_CDS1831 PF01726 LexA DNA binding domain VITFI_CDS1832 PF17763 Glutaminase/Asparaginase C-terminal domain VITFI_CDS1832 PF00710 Asparaginase, N-terminal VITFI_CDS1834 PF05175 Methyltransferase small domain VITFI_CDS1835 PF01546 Peptidase family M20/M25/M40 VITFI_CDS1835 PF07687 Peptidase dimerisation domain VITFI_CDS1836 PF00437 Type II/IV secretion system protein VITFI_CDS1837 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal VITFI_CDS1837 PF14602 Hexapeptide repeat of succinyl-transferase VITFI_CDS1839 PF00155 Aminotransferase class I and II VITFI_CDS1840 PF00719 Inorganic pyrophosphatase VITFI_CDS1841 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VITFI_CDS1841 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal VITFI_CDS1842 PF00374 Nickel-dependent hydrogenase VITFI_CDS1843 PF01292 Prokaryotic cytochrome b561 VITFI_CDS1845 PF01750 Hydrogenase maturation protease VITFI_CDS1846 PF01455 HupF/HypC family VITFI_CDS1847 PF07449 Hydrogenase-1 expression protein HyaE VITFI_CDS1848 PF04809 HupH hydrogenase expression protein, C-terminal conserved region VITFI_CDS1849 PF00301 Rubredoxin VITFI_CDS1850 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE VITFI_CDS1852 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA VITFI_CDS1853 PF02492 CobW/HypB/UreG, nucleotide-binding domain VITFI_CDS1854 PF17788 HypF Kae1-like domain VITFI_CDS1855 PF01455 HupF/HypC family VITFI_CDS1856 PF01924 Hydrogenase formation hypA family VITFI_CDS1857 PF00586 AIR synthase related protein, N-terminal domain VITFI_CDS1857 PF02769 AIR synthase related protein, C-terminal domain VITFI_CDS1858 PF01321 Creatinase/Prolidase N-terminal domain VITFI_CDS1858 PF00557 Metallopeptidase family M24 VITFI_CDS1859 PF00072 Response regulator receiver domain VITFI_CDS1859 PF00158 Sigma-54 interaction domain VITFI_CDS1859 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS1860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1860 PF00989 PAS fold VITFI_CDS1860 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1870 PF05191 Adenylate kinase, active site lid VITFI_CDS1871 PF02348 Cytidylyltransferase VITFI_CDS1872 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VITFI_CDS1872 PF03966 Trm112p-like protein VITFI_CDS1873 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VITFI_CDS1874 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS1875 PF01618 MotA/TolQ/ExbB proton channel family VITFI_CDS1876 PF02601 Exonuclease VII, large subunit VITFI_CDS1876 PF13742 OB-fold nucleic acid binding domain VITFI_CDS1877 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VITFI_CDS1877 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VITFI_CDS1878 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS1878 PF00072 Response regulator receiver domain VITFI_CDS1879 PF00672 HAMP domain VITFI_CDS1879 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS1879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS1879 PF16527 Two-component sensor protein CpxA, periplasmic domain VITFI_CDS1881 PF01970 Tripartite tricarboxylate transporter TctA family VITFI_CDS1883 PF01026 TatD related DNase VITFI_CDS1884 PF17284 Spermidine synthase tetramerisation domain VITFI_CDS1885 PF00437 Type II/IV secretion system protein VITFI_CDS1887 PF00403 Heavy-metal-associated domain VITFI_CDS1889 PF00115 Cytochrome C and Quinol oxidase polypeptide I VITFI_CDS1892 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VITFI_CDS1892 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VITFI_CDS1893 PF12801 4Fe-4S binding domain VITFI_CDS1893 PF13746 4Fe-4S dicluster domain VITFI_CDS1893 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VITFI_CDS1895 PF13545 Crp-like helix-turn-helix domain VITFI_CDS1895 PF00027 Cyclic nucleotide-binding domain VITFI_CDS1897 PF04055 Radical SAM superfamily VITFI_CDS1897 PF06969 HemN C-terminal domain VITFI_CDS1899 PF00180 Isocitrate/isopropylmalate dehydrogenase VITFI_CDS1900 PF00313 'Cold-shock' DNA-binding domain VITFI_CDS1901 PF02617 ATP-dependent Clp protease adaptor protein ClpS VITFI_CDS1902 PF10431 C-terminal, D2-small domain, of ClpB protein VITFI_CDS1902 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS1902 PF17871 AAA lid domain VITFI_CDS1902 PF07724 AAA domain (Cdc48 subfamily) VITFI_CDS1902 PF02861 Clp amino terminal domain, pathogenicity island component VITFI_CDS1903 PF00106 short chain dehydrogenase VITFI_CDS1905 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VITFI_CDS1905 PF01276 Orn/Lys/Arg decarboxylase, major domain VITFI_CDS1905 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VITFI_CDS1906 PF02685 Glucokinase VITFI_CDS1908 PF02576 RimP N-terminal domain VITFI_CDS1908 PF17384 RimP C-terminal SH3 domain VITFI_CDS1909 PF08529 NusA N-terminal domain VITFI_CDS1909 PF13184 NusA-like KH domain VITFI_CDS1910 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS1910 PF11987 Translation-initiation factor 2 VITFI_CDS1910 PF08364 Bacterial translation initiation factor IF-2 associated region VITFI_CDS1910 PF04760 Translation initiation factor IF-2, N-terminal region VITFI_CDS1911 PF02033 Ribosome-binding factor A VITFI_CDS1912 PF01509 TruB family pseudouridylate synthase (N terminal domain) VITFI_CDS1912 PF16198 tRNA pseudouridylate synthase B C-terminal domain VITFI_CDS1912 PF09157 Pseudouridine synthase II TruB, C-terminal VITFI_CDS1915 PF00892 EamA-like transporter family VITFI_CDS1916 PF00107 Zinc-binding dehydrogenase VITFI_CDS1916 PF08240 Alcohol dehydrogenase GroES-like domain VITFI_CDS1918 PF07152 YaeQ protein VITFI_CDS1919 PF00271 Helicase conserved C-terminal domain VITFI_CDS1919 PF00270 DEAD/DEAH box helicase VITFI_CDS1920 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS1920 PF00593 TonB dependent receptor VITFI_CDS1921 PF00072 Response regulator receiver domain VITFI_CDS1921 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS1923 PF00588 SpoU rRNA Methylase family VITFI_CDS1923 PF08032 RNA 2'-O ribose methyltransferase substrate binding VITFI_CDS1926 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VITFI_CDS1926 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VITFI_CDS1927 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VITFI_CDS1927 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VITFI_CDS1928 PF00633 Helix-hairpin-helix motif VITFI_CDS1928 PF10576 Iron-sulfur binding domain of endonuclease III VITFI_CDS1928 PF00730 HhH-GPD superfamily base excision DNA repair protein VITFI_CDS1929 PF04060 Putative Fe-S cluster VITFI_CDS1932 PF00155 Aminotransferase class I and II VITFI_CDS1934 PF01451 Low molecular weight phosphotyrosine protein phosphatase VITFI_CDS1935 PF02082 Transcriptional regulator VITFI_CDS1936 PF00266 Aminotransferase class-V VITFI_CDS1937 PF01592 NifU-like N terminal domain VITFI_CDS1938 PF01521 Iron-sulphur cluster biosynthesis VITFI_CDS1940 PF07743 HSCB C-terminal oligomerisation domain VITFI_CDS1941 PF00012 Hsp70 protein VITFI_CDS1942 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS1943 PF00814 Glycoprotease family VITFI_CDS1944 PF13458 Periplasmic binding protein VITFI_CDS1945 PF00312 Ribosomal protein S15 VITFI_CDS1947 PF00575 S1 RNA binding domain VITFI_CDS1947 PF03725 3' exoribonuclease family, domain 2 VITFI_CDS1947 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VITFI_CDS1947 PF01138 3' exoribonuclease family, domain 1 VITFI_CDS1947 PF00013 KH domain VITFI_CDS1948 PF08659 KR domain VITFI_CDS1948 PF14765 Polyketide synthase dehydratase VITFI_CDS1948 PF00550 Phosphopantetheine attachment site VITFI_CDS1948 PF00698 Acyl transferase domain VITFI_CDS1948 PF08240 Alcohol dehydrogenase GroES-like domain VITFI_CDS1948 PF16197 Ketoacyl-synthetase C-terminal extension VITFI_CDS1948 PF00109 Beta-ketoacyl synthase, N-terminal domain VITFI_CDS1948 PF02801 Beta-ketoacyl synthase, C-terminal domain VITFI_CDS1949 PF00121 Triosephosphate isomerase VITFI_CDS1950 PF03840 Preprotein translocase SecG subunit VITFI_CDS1951 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 VITFI_CDS1952 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VITFI_CDS1953 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VITFI_CDS1954 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VITFI_CDS1956 PF10531 SLBB domain VITFI_CDS1956 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VITFI_CDS1956 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VITFI_CDS1957 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal VITFI_CDS1957 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VITFI_CDS1957 PF00384 Molybdopterin oxidoreductase VITFI_CDS1958 PF00146 NADH dehydrogenase VITFI_CDS1959 PF12838 4Fe-4S dicluster domain VITFI_CDS1960 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 VITFI_CDS1961 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VITFI_CDS1962 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VITFI_CDS1962 PF00361 Proton-conducting membrane transporter VITFI_CDS1963 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus VITFI_CDS1963 PF00361 Proton-conducting membrane transporter VITFI_CDS1964 PF00361 Proton-conducting membrane transporter VITFI_CDS1966 PF00293 NUDIX domain VITFI_CDS1968 PF02913 FAD linked oxidases, C-terminal domain VITFI_CDS1968 PF01565 FAD binding domain VITFI_CDS1970 PF03631 Virulence factor BrkB VITFI_CDS1971 PF07879 PHB/PHA accumulation regulator DNA-binding domain VITFI_CDS1971 PF05233 PHB accumulation regulatory domain VITFI_CDS1972 PF00919 Uncharacterized protein family UPF0004 VITFI_CDS1972 PF18693 TRAM domain VITFI_CDS1972 PF04055 Radical SAM superfamily VITFI_CDS1973 PF01062 Bestrophin, RFP-TM, chloride channel VITFI_CDS1974 PF01053 Cys/Met metabolism PLP-dependent enzyme VITFI_CDS1975 PF01668 SmpB protein VITFI_CDS1977 PF03658 RnfH family Ubiquitin VITFI_CDS1979 PF00478 IMP dehydrogenase / GMP reductase domain VITFI_CDS1979 PF00571 CBS domain VITFI_CDS1980 PF07690 Major Facilitator Superfamily VITFI_CDS1982 PF00117 Glutamine amidotransferase class-I VITFI_CDS1982 PF02540 NAD synthase VITFI_CDS1982 PF00958 GMP synthase C terminal domain VITFI_CDS1987 PF00576 HIUase/Transthyretin family VITFI_CDS1988 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS1988 PF07729 FCD domain VITFI_CDS1990 PF01546 Peptidase family M20/M25/M40 VITFI_CDS1990 PF07687 Peptidase dimerisation domain VITFI_CDS1991 PF07687 Peptidase dimerisation domain VITFI_CDS1991 PF01546 Peptidase family M20/M25/M40 VITFI_CDS1992 PF09084 NMT1/THI5 like VITFI_CDS1993 PF00005 ABC transporter VITFI_CDS1994 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS1996 PF14437 MafB19-like deaminase VITFI_CDS1997 PF02016 LD-carboxypeptidase N-terminal domain VITFI_CDS1997 PF17676 LD-carboxypeptidase C-terminal domain VITFI_CDS1999 PF01368 DHH family VITFI_CDS1999 PF02272 DHHA1 domain VITFI_CDS1999 PF17768 RecJ OB domain VITFI_CDS2008 PF05114 Protein of unknown function (DUF692) VITFI_CDS2010 PF00437 Type II/IV secretion system protein VITFI_CDS2012 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS2013 PF01618 MotA/TolQ/ExbB proton channel family VITFI_CDS2014 PF03061 Thioesterase superfamily VITFI_CDS2015 PF03793 PASTA domain VITFI_CDS2015 PF00069 Protein kinase domain VITFI_CDS2017 PF01029 NusB family VITFI_CDS2018 PF00885 6,7-dimethyl-8-ribityllumazine synthase VITFI_CDS2019 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VITFI_CDS2019 PF00925 GTP cyclohydrolase II VITFI_CDS2020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VITFI_CDS2020 PF01872 RibD C-terminal domain VITFI_CDS2022 PF03466 LysR substrate binding domain VITFI_CDS2022 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2025 PF01322 Cytochrome C' VITFI_CDS2027 PF00534 Glycosyl transferases group 1 VITFI_CDS2031 PF12706 Beta-lactamase superfamily domain VITFI_CDS2032 PF00005 ABC transporter VITFI_CDS2041 PF03401 Tripartite tricarboxylate transporter family receptor VITFI_CDS2042 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS2042 PF00072 Response regulator receiver domain VITFI_CDS2043 PF05231 MASE1 VITFI_CDS2043 PF07730 Histidine kinase VITFI_CDS2043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2046 PF09297 NADH pyrophosphatase zinc ribbon domain VITFI_CDS2046 PF00293 NUDIX domain VITFI_CDS2047 PF01557 Fumarylacetoacetate (FAA) hydrolase family VITFI_CDS2048 PF13417 Glutathione S-transferase, N-terminal domain VITFI_CDS2051 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VITFI_CDS2052 PF02803 Thiolase, C-terminal domain VITFI_CDS2052 PF00108 Thiolase, N-terminal domain VITFI_CDS2053 PF00106 short chain dehydrogenase VITFI_CDS2062 PF00557 Metallopeptidase family M24 VITFI_CDS2063 PF00672 HAMP domain VITFI_CDS2063 PF17149 Periplasmic sensor domain found in signal transduction proteins VITFI_CDS2063 PF00072 Response regulator receiver domain VITFI_CDS2063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2063 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2063 PF01627 Hpt domain VITFI_CDS2064 PF00072 Response regulator receiver domain VITFI_CDS2065 PF00005 ABC transporter VITFI_CDS2065 PF08402 TOBE domain VITFI_CDS2066 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2067 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2068 PF01547 Bacterial extracellular solute-binding protein VITFI_CDS2069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2069 PF08521 Two-component sensor kinase N-terminal VITFI_CDS2069 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2070 PF00072 Response regulator receiver domain VITFI_CDS2070 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2073 PF01970 Tripartite tricarboxylate transporter TctA family VITFI_CDS2075 PF03401 Tripartite tricarboxylate transporter family receptor VITFI_CDS2076 PF00072 Response regulator receiver domain VITFI_CDS2076 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2077 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2077 PF08521 Two-component sensor kinase N-terminal VITFI_CDS2077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2079 PF01479 S4 domain VITFI_CDS2080 PF01025 GrpE VITFI_CDS2081 PF00012 Hsp70 protein VITFI_CDS2082 PF00684 DnaJ central domain VITFI_CDS2082 PF01556 DnaJ C terminal domain VITFI_CDS2082 PF00226 DnaJ domain VITFI_CDS2083 PF03796 DnaB-like helicase C terminal domain VITFI_CDS2083 PF00772 DnaB-like helicase N terminal domain VITFI_CDS2083 PF14528 LAGLIDADG-like domain VITFI_CDS2084 PF01281 Ribosomal protein L9, N-terminal domain VITFI_CDS2084 PF03948 Ribosomal protein L9, C-terminal domain VITFI_CDS2085 PF01084 Ribosomal protein S18 VITFI_CDS2087 PF01250 Ribosomal protein S6 VITFI_CDS2088 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VITFI_CDS2088 PF02896 PEP-utilising enzyme, TIM barrel domain VITFI_CDS2088 PF00391 PEP-utilising enzyme, mobile domain VITFI_CDS2090 PF03618 Kinase/pyrophosphorylase VITFI_CDS2095 PF05161 MOFRL family VITFI_CDS2095 PF13660 Domain of unknown function (DUF4147) VITFI_CDS2096 PF01261 Xylose isomerase-like TIM barrel VITFI_CDS2097 PF00270 DEAD/DEAH box helicase VITFI_CDS2097 PF02559 CarD-like/TRCF domain VITFI_CDS2097 PF17757 UvrB interaction domain VITFI_CDS2097 PF00271 Helicase conserved C-terminal domain VITFI_CDS2097 PF03461 TRCF domain VITFI_CDS2099 PF02542 YgbB family VITFI_CDS2099 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VITFI_CDS2100 PF02542 YgbB family VITFI_CDS2101 PF00672 HAMP domain VITFI_CDS2101 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2101 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2102 PF00072 Response regulator receiver domain VITFI_CDS2102 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2103 PF00106 short chain dehydrogenase VITFI_CDS2105 PF04607 Region found in RelA / SpoT proteins VITFI_CDS2105 PF02824 TGS domain VITFI_CDS2105 PF13291 ACT domain VITFI_CDS2107 PF10996 Beta-Casp domain VITFI_CDS2107 PF00753 Metallo-beta-lactamase superfamily VITFI_CDS2107 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VITFI_CDS2108 PF00271 Helicase conserved C-terminal domain VITFI_CDS2108 PF00270 DEAD/DEAH box helicase VITFI_CDS2109 PF12848 ABC transporter VITFI_CDS2109 PF00005 ABC transporter VITFI_CDS2110 PF00158 Sigma-54 interaction domain VITFI_CDS2110 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS2110 PF13426 PAS domain VITFI_CDS2127 PF01867 CRISPR associated protein Cas1 VITFI_CDS2128 PF09827 CRISPR associated protein Cas2 VITFI_CDS2138 PF09820 Predicted AAA-ATPase VITFI_CDS2138 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS2148 PF00149 Calcineurin-like phosphoesterase VITFI_CDS2148 PF02872 5'-nucleotidase, C-terminal domain VITFI_CDS2150 PF01867 CRISPR associated protein Cas1 VITFI_CDS2152 PF17946 RecC C-terminal domain VITFI_CDS2153 PF13361 UvrD-like helicase C-terminal domain VITFI_CDS2153 PF12705 PD-(D/E)XK nuclease superfamily VITFI_CDS2153 PF00580 UvrD/REP helicase N-terminal domain VITFI_CDS2154 PF13538 UvrD-like helicase C-terminal domain VITFI_CDS2155 PF02230 Phospholipase/Carboxylesterase VITFI_CDS2156 PF03883 Peroxide stress protein YaaA VITFI_CDS2160 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS2165 PF00005 ABC transporter VITFI_CDS2167 PF02321 Outer membrane efflux protein VITFI_CDS2168 PF00239 Resolvase, N terminal domain VITFI_CDS2168 PF02796 Helix-turn-helix domain of resolvase VITFI_CDS2172 PF04715 Anthranilate synthase component I, N terminal region VITFI_CDS2172 PF00425 chorismate binding enzyme VITFI_CDS2173 PF09335 SNARE associated Golgi protein VITFI_CDS2174 PF01119 DNA mismatch repair protein, C-terminal domain VITFI_CDS2174 PF08676 MutL C terminal dimerisation domain VITFI_CDS2175 PF00849 RNA pseudouridylate synthase VITFI_CDS2175 PF01479 S4 domain VITFI_CDS2176 PF07690 Major Facilitator Superfamily VITFI_CDS2180 PF00303 Thymidylate synthase VITFI_CDS2181 PF00186 Dihydrofolate reductase VITFI_CDS2184 PF18073 Rubredoxin metal binding domain VITFI_CDS2185 PF06167 Glucose-regulated metallo-peptidase M90 VITFI_CDS2186 PF00149 Calcineurin-like phosphoesterase VITFI_CDS2187 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VITFI_CDS2188 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VITFI_CDS2189 PF01406 tRNA synthetases class I (C) catalytic domain VITFI_CDS2189 PF09190 DALR domain VITFI_CDS2190 PF12833 Helix-turn-helix domain VITFI_CDS2190 PF00730 HhH-GPD superfamily base excision DNA repair protein VITFI_CDS2190 PF06029 AlkA N-terminal domain VITFI_CDS2190 PF02805 Metal binding domain of Ada VITFI_CDS2191 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VITFI_CDS2192 PF11734 TilS substrate C-terminal domain VITFI_CDS2192 PF01171 PP-loop family VITFI_CDS2192 PF09179 TilS substrate binding domain VITFI_CDS2193 PF13840 ACT domain VITFI_CDS2193 PF01842 ACT domain VITFI_CDS2193 PF00696 Amino acid kinase family VITFI_CDS2194 PF02384 N-6 DNA Methylase VITFI_CDS2194 PF12161 HsdM N-terminal domain VITFI_CDS2195 PF00145 C-5 cytosine-specific DNA methylase VITFI_CDS2197 PF01207 Dihydrouridine synthase (Dus) VITFI_CDS2201 PF00120 Glutamine synthetase, catalytic domain VITFI_CDS2202 PF00171 Aldehyde dehydrogenase family VITFI_CDS2204 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2205 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2206 PF00005 ABC transporter VITFI_CDS2206 PF08402 TOBE domain VITFI_CDS2207 PF13416 Bacterial extracellular solute-binding protein VITFI_CDS2208 PF00202 Aminotransferase class-III VITFI_CDS2209 PF00120 Glutamine synthetase, catalytic domain VITFI_CDS2210 PF00120 Glutamine synthetase, catalytic domain VITFI_CDS2211 PF07722 Peptidase C26 VITFI_CDS2212 PF01037 Lrp/AsnC ligand binding domain VITFI_CDS2214 PF00491 Arginase family VITFI_CDS2215 PF00463 Isocitrate lyase family VITFI_CDS2223 PF01136 Peptidase family U32 VITFI_CDS2223 PF12392 Collagenase VITFI_CDS2224 PF01026 TatD related DNase VITFI_CDS2226 PF09115 DNA polymerase III, delta subunit, C terminal VITFI_CDS2227 PF02223 Thymidylate kinase VITFI_CDS2228 PF02618 YceG-like family VITFI_CDS2229 PF01571 Aminomethyltransferase folate-binding domain VITFI_CDS2231 PF07859 alpha/beta hydrolase fold VITFI_CDS2232 PF00909 Ammonium Transporter Family VITFI_CDS2235 PF01144 Coenzyme A transferase VITFI_CDS2236 PF01144 Coenzyme A transferase VITFI_CDS2237 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS2237 PF00072 Response regulator receiver domain VITFI_CDS2241 PF00120 Glutamine synthetase, catalytic domain VITFI_CDS2242 PF02811 PHP domain VITFI_CDS2243 PF01300 Telomere recombination VITFI_CDS2245 PF01042 Endoribonuclease L-PSP VITFI_CDS2246 PF02660 Glycerol-3-phosphate acyltransferase VITFI_CDS2247 PF04073 Aminoacyl-tRNA editing domain VITFI_CDS2248 PF00248 Aldo/keto reductase family VITFI_CDS2249 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS2250 PF08669 Glycine cleavage T-protein C-terminal barrel domain VITFI_CDS2250 PF01571 Aminomethyltransferase folate-binding domain VITFI_CDS2251 PF01597 Glycine cleavage H-protein VITFI_CDS2252 PF02347 Glycine cleavage system P-protein VITFI_CDS2255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS2256 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS2257 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS2258 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS2263 PF13806 Rieske-like [2Fe-2S] domain VITFI_CDS2264 PF18267 Rubredoxin NAD+ reductase C-terminal domain VITFI_CDS2264 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS2264 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VITFI_CDS2264 PF04324 BFD-like [2Fe-2S] binding domain VITFI_CDS2264 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VITFI_CDS2266 PF00571 CBS domain VITFI_CDS2266 PF00478 IMP dehydrogenase / GMP reductase domain VITFI_CDS2268 PF01627 Hpt domain VITFI_CDS2268 PF00672 HAMP domain VITFI_CDS2268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2268 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2268 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS2268 PF00072 Response regulator receiver domain VITFI_CDS2269 PF00271 Helicase conserved C-terminal domain VITFI_CDS2269 PF04408 Helicase associated domain (HA2) VITFI_CDS2269 PF11898 Domain of unknown function (DUF3418) VITFI_CDS2269 PF00270 DEAD/DEAH box helicase VITFI_CDS2269 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VITFI_CDS2271 PF00583 Acetyltransferase (GNAT) family VITFI_CDS2271 PF00696 Amino acid kinase family VITFI_CDS2272 PF04362 Bacterial Fe(2+) trafficking VITFI_CDS2273 PF13416 Bacterial extracellular solute-binding protein VITFI_CDS2274 PF00816 H-NS histone family VITFI_CDS2275 PF01807 CHC2 zinc finger VITFI_CDS2275 PF08278 DNA primase DnaG DnaB-binding VITFI_CDS2275 PF10410 DnaB-helicase binding domain of primase VITFI_CDS2275 PF08275 DNA primase catalytic core, N-terminal domain VITFI_CDS2276 PF04545 Sigma-70, region 4 VITFI_CDS2276 PF00140 Sigma-70 factor, region 1.2 VITFI_CDS2276 PF03979 Sigma-70 factor, region 1.1 VITFI_CDS2276 PF04546 Sigma-70, non-essential region VITFI_CDS2276 PF04539 Sigma-70 region 3 VITFI_CDS2276 PF04542 Sigma-70 region 2 VITFI_CDS2277 PF00150 Cellulase (glycosyl hydrolase family 5) VITFI_CDS2277 PF00553 Cellulose binding domain VITFI_CDS2279 PF00762 Ferrochelatase VITFI_CDS2282 PF00588 SpoU rRNA Methylase family VITFI_CDS2282 PF08032 RNA 2'-O ribose methyltransferase substrate binding VITFI_CDS2283 PF01351 Ribonuclease HII VITFI_CDS2284 PF02684 Lipid-A-disaccharide synthetase VITFI_CDS2285 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VITFI_CDS2285 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS2286 PF07977 FabA-like domain VITFI_CDS2287 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VITFI_CDS2287 PF14602 Hexapeptide repeat of succinyl-transferase VITFI_CDS2287 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS2289 PF07244 Surface antigen variable number repeat VITFI_CDS2289 PF01103 Surface antigen VITFI_CDS2290 PF17820 PDZ domain VITFI_CDS2290 PF02163 Peptidase family M50 VITFI_CDS2291 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VITFI_CDS2291 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VITFI_CDS2291 PF13288 DXP reductoisomerase C-terminal domain VITFI_CDS2293 PF01255 Putative undecaprenyl diphosphate synthase VITFI_CDS2294 PF01765 Ribosome recycling factor VITFI_CDS2295 PF00696 Amino acid kinase family VITFI_CDS2296 PF00889 Elongation factor TS VITFI_CDS2297 PF00318 Ribosomal protein S2 VITFI_CDS2298 PF01256 Carbohydrate kinase VITFI_CDS2298 PF03853 YjeF-related protein N-terminus VITFI_CDS2299 PF04461 Protein of unknown function (DUF520) VITFI_CDS2300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VITFI_CDS2300 PF01565 FAD binding domain VITFI_CDS2301 PF17149 Periplasmic sensor domain found in signal transduction proteins VITFI_CDS2301 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2301 PF00672 HAMP domain VITFI_CDS2301 PF01627 Hpt domain VITFI_CDS2301 PF00072 Response regulator receiver domain VITFI_CDS2301 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2305 PF01327 Polypeptide deformylase VITFI_CDS2306 PF13472 GDSL-like Lipase/Acylhydrolase family VITFI_CDS2307 PF00005 ABC transporter VITFI_CDS2310 PF04279 Intracellular septation protein A VITFI_CDS2311 PF01641 SelR domain VITFI_CDS2312 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VITFI_CDS2313 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS2315 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS2315 PF00005 ABC transporter VITFI_CDS2316 PF00005 ABC transporter VITFI_CDS2321 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS2322 PF03781 Sulfatase-modifying factor enzyme 1 VITFI_CDS2327 PF14489 QueF-like protein VITFI_CDS2328 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS2328 PF06470 SMC proteins Flexible Hinge Domain VITFI_CDS2331 PF12826 Helix-hairpin-helix motif VITFI_CDS2331 PF03120 NAD-dependent DNA ligase OB-fold domain VITFI_CDS2331 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VITFI_CDS2331 PF00533 BRCA1 C Terminus (BRCT) domain VITFI_CDS2331 PF01653 NAD-dependent DNA ligase adenylation domain VITFI_CDS2334 PF01520 N-acetylmuramoyl-L-alanine amidase VITFI_CDS2334 PF11741 AMIN domain VITFI_CDS2335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VITFI_CDS2336 PF08331 Domain of unknown function (DUF1730) VITFI_CDS2339 PF13609 Gram-negative porin VITFI_CDS2340 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2341 PF00497 Bacterial extracellular solute-binding proteins, family 3 VITFI_CDS2342 PF04305 Protein of unknown function (DUF455) VITFI_CDS2343 PF01430 Hsp33 protein VITFI_CDS2345 PF04973 Nicotinamide mononucleotide transporter VITFI_CDS2346 PF04977 Septum formation initiator VITFI_CDS2348 PF00113 Enolase, C-terminal TIM barrel domain VITFI_CDS2348 PF03952 Enolase, N-terminal domain VITFI_CDS2349 PF00793 DAHP synthetase I family VITFI_CDS2350 PF06418 CTP synthase N-terminus VITFI_CDS2350 PF00117 Glutamine amidotransferase class-I VITFI_CDS2352 PF01624 MutS domain I VITFI_CDS2352 PF05190 MutS family domain IV VITFI_CDS2352 PF05192 MutS domain III VITFI_CDS2352 PF05188 MutS domain II VITFI_CDS2352 PF00488 MutS domain V VITFI_CDS2353 PF00459 Inositol monophosphatase family VITFI_CDS2355 PF00588 SpoU rRNA Methylase family VITFI_CDS2356 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS2359 PF00005 ABC transporter VITFI_CDS2360 PF00551 Formyl transferase VITFI_CDS2362 PF00581 Rhodanese-like domain VITFI_CDS2363 PF00582 Universal stress protein family VITFI_CDS2366 PF05698 Bacterial trigger factor protein (TF) C-terminus VITFI_CDS2369 PF01066 CDP-alcohol phosphatidyltransferase VITFI_CDS2370 PF01541 GIY-YIG catalytic domain VITFI_CDS2370 PF02151 UvrB/uvrC motif VITFI_CDS2370 PF08459 UvrC Helix-hairpin-helix N-terminal VITFI_CDS2376 PF01867 CRISPR associated protein Cas1 VITFI_CDS2377 PF09827 CRISPR associated protein Cas2 VITFI_CDS2379 PF01132 Elongation factor P (EF-P) OB domain VITFI_CDS2379 PF08207 Elongation factor P (EF-P) KOW-like domain VITFI_CDS2379 PF09285 Elongation factor P, C-terminal VITFI_CDS2380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VITFI_CDS2380 PF01266 FAD dependent oxidoreductase VITFI_CDS2381 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VITFI_CDS2382 PF01180 Dihydroorotate dehydrogenase VITFI_CDS2384 PF00989 PAS fold VITFI_CDS2384 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2385 PF00374 Nickel-dependent hydrogenase VITFI_CDS2386 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VITFI_CDS2386 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal VITFI_CDS2387 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS2388 PF00072 Response regulator receiver domain VITFI_CDS2388 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS2388 PF00158 Sigma-54 interaction domain VITFI_CDS2390 PF16921 Tex protein YqgF-like domain VITFI_CDS2390 PF09371 Tex-like protein N-terminal domain VITFI_CDS2390 PF17674 HHH domain VITFI_CDS2390 PF00575 S1 RNA binding domain VITFI_CDS2395 PF08713 DNA alkylation repair enzyme VITFI_CDS2396 PF01336 OB-fold nucleic acid binding domain VITFI_CDS2396 PF07733 Bacterial DNA polymerase III alpha NTPase domain VITFI_CDS2396 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VITFI_CDS2396 PF14579 Helix-hairpin-helix motif VITFI_CDS2396 PF02811 PHP domain VITFI_CDS2398 PF13580 SIS domain VITFI_CDS2399 PF00294 pfkB family carbohydrate kinase VITFI_CDS2403 PF00534 Glycosyl transferases group 1 VITFI_CDS2403 PF13439 Glycosyltransferase Family 4 VITFI_CDS2404 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VITFI_CDS2405 PF01467 Cytidylyltransferase-like VITFI_CDS2406 PF00664 ABC transporter transmembrane region VITFI_CDS2406 PF00005 ABC transporter VITFI_CDS2407 PF00216 Bacterial DNA-binding protein VITFI_CDS2408 PF00575 S1 RNA binding domain VITFI_CDS2409 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VITFI_CDS2410 PF02153 Prephenate dehydrogenase VITFI_CDS2411 PF01842 ACT domain VITFI_CDS2411 PF00800 Prephenate dehydratase VITFI_CDS2411 PF01817 Chorismate mutase type II VITFI_CDS2412 PF00266 Aminotransferase class-V VITFI_CDS2414 PF00521 DNA gyrase/topoisomerase IV, subunit A VITFI_CDS2414 PF03989 DNA gyrase C-terminal domain, beta-propeller VITFI_CDS2415 PF00691 OmpA family VITFI_CDS2417 PF13419 Haloacid dehalogenase-like hydrolase VITFI_CDS2419 PF18766 SWI2/SNF2 ATPase VITFI_CDS2419 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VITFI_CDS2419 PF11867 Domain of unknown function (DUF3387) VITFI_CDS2421 PF01420 Type I restriction modification DNA specificity domain VITFI_CDS2422 PF12161 HsdM N-terminal domain VITFI_CDS2422 PF02384 N-6 DNA Methylase VITFI_CDS2423 PF01177 Asp/Glu/Hydantoin racemase VITFI_CDS2424 PF01012 Electron transfer flavoprotein domain VITFI_CDS2425 PF00766 Electron transfer flavoprotein FAD-binding domain VITFI_CDS2425 PF01012 Electron transfer flavoprotein domain VITFI_CDS2426 PF09361 Phasin protein VITFI_CDS2428 PF00850 Histone deacetylase domain VITFI_CDS2430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VITFI_CDS2430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VITFI_CDS2432 PF01432 Peptidase family M3 VITFI_CDS2433 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VITFI_CDS2433 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VITFI_CDS2434 PF00072 Response regulator receiver domain VITFI_CDS2434 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS2435 PF00989 PAS fold VITFI_CDS2435 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2436 PF17831 Pyruvate dehydrogenase E1 component middle domain VITFI_CDS2436 PF00456 Transketolase, thiamine diphosphate binding domain VITFI_CDS2437 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VITFI_CDS2437 PF00364 Biotin-requiring enzyme VITFI_CDS2437 PF02817 e3 binding domain VITFI_CDS2438 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VITFI_CDS2438 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS2439 PF01029 NusB family VITFI_CDS2439 PF01189 16S rRNA methyltransferase RsmB/F VITFI_CDS2442 PF00830 Ribosomal L28 family VITFI_CDS2443 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS2444 PF01580 FtsK/SpoIIIE family VITFI_CDS2444 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VITFI_CDS2444 PF17854 FtsK alpha domain VITFI_CDS2444 PF09397 Ftsk gamma domain VITFI_CDS2445 PF03548 Outer membrane lipoprotein carrier protein LolA VITFI_CDS2446 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS2446 PF12002 MgsA AAA+ ATPase C terminal VITFI_CDS2446 PF16193 AAA C-terminal domain VITFI_CDS2447 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS2448 PF11862 Domain of unknown function (DUF3382) VITFI_CDS2448 PF02653 Branched-chain amino acid transport system / permease component VITFI_CDS2449 PF00005 ABC transporter VITFI_CDS2449 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS2450 PF00005 ABC transporter VITFI_CDS2452 PF04337 Protein of unknown function, DUF480 VITFI_CDS2454 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS2454 PF00593 TonB dependent receptor VITFI_CDS2455 PF11953 Domain of unknown function (DUF3470) VITFI_CDS2455 PF00037 4Fe-4S binding domain VITFI_CDS2456 PF14824 Sirohaem biosynthesis protein central VITFI_CDS2456 PF10414 Sirohaem synthase dimerisation region VITFI_CDS2456 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS2457 PF01507 Phosphoadenosine phosphosulfate reductase family VITFI_CDS2460 PF00005 ABC transporter VITFI_CDS2461 PF02687 FtsX-like permease family VITFI_CDS2461 PF12704 MacB-like periplasmic core domain VITFI_CDS2464 PF07963 Prokaryotic N-terminal methylation motif VITFI_CDS2464 PF00114 Pilin (bacterial filament) VITFI_CDS2469 PF05567 Neisseria PilC beta-propeller domain VITFI_CDS2472 PF01774 UreD urease accessory protein VITFI_CDS2475 PF00155 Aminotransferase class I and II VITFI_CDS2475 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS2477 PF02540 NAD synthase VITFI_CDS2477 PF00795 Carbon-nitrogen hydrolase VITFI_CDS2478 PF00543 Nitrogen regulatory protein P-II VITFI_CDS2479 PF03641 Possible lysine decarboxylase VITFI_CDS2480 PF01219 Prokaryotic diacylglycerol kinase VITFI_CDS2485 PF00205 Thiamine pyrophosphate enzyme, central domain VITFI_CDS2485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VITFI_CDS2485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VITFI_CDS2486 PF10369 Small subunit of acetolactate synthase VITFI_CDS2487 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VITFI_CDS2487 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VITFI_CDS2488 PF01066 CDP-alcohol phosphatidyltransferase VITFI_CDS2489 PF00682 HMGL-like VITFI_CDS2489 PF08502 LeuA allosteric (dimerisation) domain VITFI_CDS2491 PF00768 D-alanyl-D-alanine carboxypeptidase VITFI_CDS2492 PF01614 Bacterial transcriptional regulator VITFI_CDS2492 PF09339 IclR helix-turn-helix domain VITFI_CDS2493 PF01593 Flavin containing amine oxidoreductase VITFI_CDS2496 PF13533 Biotin-lipoyl like VITFI_CDS2497 PF00873 AcrB/AcrD/AcrF family VITFI_CDS2498 PF05697 Bacterial trigger factor protein (TF) VITFI_CDS2498 PF05698 Bacterial trigger factor protein (TF) C-terminus VITFI_CDS2498 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VITFI_CDS2499 PF00574 Clp protease VITFI_CDS2500 PF10431 C-terminal, D2-small domain, of ClpB protein VITFI_CDS2500 PF07724 AAA domain (Cdc48 subfamily) VITFI_CDS2500 PF06689 ClpX C4-type zinc finger VITFI_CDS2501 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS2501 PF05362 Lon protease (S16) C-terminal proteolytic domain VITFI_CDS2501 PF02190 ATP-dependent protease La (LON) substrate-binding domain VITFI_CDS2503 PF01264 Chorismate synthase VITFI_CDS2504 PF00005 ABC transporter VITFI_CDS2504 PF00571 CBS domain VITFI_CDS2505 PF02769 AIR synthase related protein, C-terminal domain VITFI_CDS2505 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VITFI_CDS2505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VITFI_CDS2508 PF00072 Response regulator receiver domain VITFI_CDS2508 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2509 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2509 PF08521 Two-component sensor kinase N-terminal VITFI_CDS2511 PF00365 Phosphofructokinase VITFI_CDS2515 PF04030 D-arabinono-1,4-lactone oxidase VITFI_CDS2515 PF01565 FAD binding domain VITFI_CDS2516 PF00106 short chain dehydrogenase VITFI_CDS2518 PF00005 ABC transporter VITFI_CDS2518 PF00664 ABC transporter transmembrane region VITFI_CDS2519 PF00664 ABC transporter transmembrane region VITFI_CDS2519 PF00005 ABC transporter VITFI_CDS2520 PF00929 Exonuclease VITFI_CDS2522 PF03193 RsgA GTPase VITFI_CDS2524 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS2524 PF00155 Aminotransferase class I and II VITFI_CDS2526 PF17113 Regulatory signalling modulator protein AmpE VITFI_CDS2526 PF03186 CobD/Cbib protein VITFI_CDS2527 PF00293 NUDIX domain VITFI_CDS2528 PF01245 Ribosomal protein L19 VITFI_CDS2529 PF01746 tRNA (Guanine-1)-methyltransferase VITFI_CDS2530 PF01782 RimM N-terminal domain VITFI_CDS2530 PF05239 PRC-barrel domain VITFI_CDS2531 PF00886 Ribosomal protein S16 VITFI_CDS2535 PF01384 Phosphate transporter family VITFI_CDS2536 PF01865 Protein of unknown function DUF47 VITFI_CDS2537 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VITFI_CDS2538 PF01743 Poly A polymerase head domain VITFI_CDS2538 PF12626 Polymerase A arginine-rich C-terminus VITFI_CDS2538 PF12627 Probable RNA and SrmB- binding site of polymerase A VITFI_CDS2541 PF01594 AI-2E family transporter VITFI_CDS2542 PF03023 Lipid II flippase MurJ VITFI_CDS2543 PF01649 Ribosomal protein S20 VITFI_CDS2545 PF00202 Aminotransferase class-III VITFI_CDS2546 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VITFI_CDS2546 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VITFI_CDS2548 PF00069 Protein kinase domain VITFI_CDS2548 PF03793 PASTA domain VITFI_CDS2550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VITFI_CDS2550 PF02272 DHHA1 domain VITFI_CDS2550 PF01411 tRNA synthetases class II (A) VITFI_CDS2551 PF01619 Proline dehydrogenase VITFI_CDS2551 PF00171 Aldehyde dehydrogenase family VITFI_CDS2551 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VITFI_CDS2551 PF14850 DNA-binding domain of Proline dehydrogenase VITFI_CDS2552 PF01037 Lrp/AsnC ligand binding domain VITFI_CDS2553 PF00929 Exonuclease VITFI_CDS2554 PF01790 Prolipoprotein diacylglyceryl transferase VITFI_CDS2555 PF00920 Dehydratase family VITFI_CDS2557 PF00034 Cytochrome c VITFI_CDS2558 PF16177 Acetyl-coenzyme A synthetase N-terminus VITFI_CDS2558 PF00501 AMP-binding enzyme VITFI_CDS2558 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS2559 PF03350 Uncharacterized protein family, UPF0114 VITFI_CDS2561 PF12794 Mechanosensitive ion channel inner membrane domain 1 VITFI_CDS2561 PF00924 Mechanosensitive ion channel VITFI_CDS2561 PF12795 Mechanosensitive ion channel porin domain VITFI_CDS2562 PF04539 Sigma-70 region 3 VITFI_CDS2562 PF04545 Sigma-70, region 4 VITFI_CDS2562 PF00140 Sigma-70 factor, region 1.2 VITFI_CDS2562 PF04542 Sigma-70 region 2 VITFI_CDS2563 PF01119 DNA mismatch repair protein, C-terminal domain VITFI_CDS2563 PF08676 MutL C terminal dimerisation domain VITFI_CDS2567 PF00145 C-5 cytosine-specific DNA methylase VITFI_CDS2568 PF00850 Histone deacetylase domain VITFI_CDS2570 PF17863 AAA lid domain VITFI_CDS2570 PF07726 ATPase family associated with various cellular activities (AAA) VITFI_CDS2572 PF11992 Domain of unknown function (DUF3488) VITFI_CDS2572 PF01841 Transglutaminase-like superfamily VITFI_CDS2572 PF13559 Domain of unknown function (DUF4129) VITFI_CDS2573 PF13406 Transglycosylase SLT domain VITFI_CDS2576 PF01925 Sulfite exporter TauE/SafE VITFI_CDS2577 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VITFI_CDS2577 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VITFI_CDS2578 PF01165 Ribosomal protein S21 VITFI_CDS2582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2582 PF03466 LysR substrate binding domain VITFI_CDS2583 PF03466 LysR substrate binding domain VITFI_CDS2583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2584 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VITFI_CDS2585 PF00892 EamA-like transporter family VITFI_CDS2587 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VITFI_CDS2587 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VITFI_CDS2593 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VITFI_CDS2594 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS2595 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS2596 PF01523 Putative modulator of DNA gyrase VITFI_CDS2597 PF04751 Protein of unknown function (DUF615) VITFI_CDS2598 PF00994 Probable molybdopterin binding domain VITFI_CDS2605 PF00072 Response regulator receiver domain VITFI_CDS2605 PF00672 HAMP domain VITFI_CDS2605 PF01627 Hpt domain VITFI_CDS2605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2605 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2605 PF17149 Periplasmic sensor domain found in signal transduction proteins VITFI_CDS2606 PF01739 CheR methyltransferase, SAM binding domain VITFI_CDS2606 PF03705 CheR methyltransferase, all-alpha domain VITFI_CDS2606 PF08448 PAS fold VITFI_CDS2606 PF01339 CheB methylesterase VITFI_CDS2608 PF03737 Aldolase/RraA VITFI_CDS2609 PF02445 Quinolinate synthetase A protein VITFI_CDS2610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VITFI_CDS2610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VITFI_CDS2611 PF00890 FAD binding domain VITFI_CDS2611 PF02910 Fumarate reductase flavoprotein C-term VITFI_CDS2612 PF02861 Clp amino terminal domain, pathogenicity island component VITFI_CDS2612 PF17871 AAA lid domain VITFI_CDS2612 PF00004 ATPase family associated with various cellular activities (AAA) VITFI_CDS2612 PF07724 AAA domain (Cdc48 subfamily) VITFI_CDS2612 PF10431 C-terminal, D2-small domain, of ClpB protein VITFI_CDS2613 PF01613 Flavin reductase like domain VITFI_CDS2614 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VITFI_CDS2615 PF02391 MoaE protein VITFI_CDS2616 PF02597 ThiS family VITFI_CDS2617 PF03454 MoeA C-terminal region (domain IV) VITFI_CDS2617 PF03453 MoeA N-terminal region (domain I and II) VITFI_CDS2617 PF00994 Probable molybdopterin binding domain VITFI_CDS2618 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VITFI_CDS2619 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS2619 PF14821 Threonine synthase N terminus VITFI_CDS2623 PF03447 Homoserine dehydrogenase, NAD binding domain VITFI_CDS2623 PF01842 ACT domain VITFI_CDS2623 PF00742 Homoserine dehydrogenase VITFI_CDS2624 PF00155 Aminotransferase class I and II VITFI_CDS2626 PF00578 AhpC/TSA family VITFI_CDS2628 PF13638 PIN domain VITFI_CDS2628 PF02562 PhoH-like protein VITFI_CDS2629 PF00877 NlpC/P60 family VITFI_CDS2630 PF06463 Molybdenum Cofactor Synthesis C VITFI_CDS2630 PF04055 Radical SAM superfamily VITFI_CDS2631 PF00075 RNase H VITFI_CDS2632 PF01209 ubiE/COQ5 methyltransferase family VITFI_CDS2633 PF16123 Hydroxyacylglutathione hydrolase C-terminus VITFI_CDS2633 PF00753 Metallo-beta-lactamase superfamily VITFI_CDS2634 PF01464 Transglycosylase SLT domain VITFI_CDS2634 PF01476 LysM domain VITFI_CDS2635 PF02132 RecR protein VITFI_CDS2635 PF13662 Toprim domain VITFI_CDS2636 PF02575 YbaB/EbfC DNA-binding family VITFI_CDS2637 PF12170 DNA polymerase III tau subunit V interacting with alpha VITFI_CDS2637 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VITFI_CDS2637 PF12169 DNA polymerase III subunits gamma and tau domain III VITFI_CDS2638 PF00586 AIR synthase related protein, N-terminal domain VITFI_CDS2638 PF02769 AIR synthase related protein, C-terminal domain VITFI_CDS2640 PF00561 alpha/beta hydrolase fold VITFI_CDS2641 PF00474 Sodium:solute symporter family VITFI_CDS2645 PF03462 PCRF domain VITFI_CDS2645 PF00472 RF-1 domain VITFI_CDS2646 PF11940 Domain of unknown function (DUF3458) Ig-like fold VITFI_CDS2646 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VITFI_CDS2646 PF01433 Peptidase family M1 domain VITFI_CDS2647 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VITFI_CDS2650 PF00106 short chain dehydrogenase VITFI_CDS2652 PF00849 RNA pseudouridylate synthase VITFI_CDS2655 PF00005 ABC transporter VITFI_CDS2655 PF12704 MacB-like periplasmic core domain VITFI_CDS2655 PF02687 FtsX-like permease family VITFI_CDS2656 PF12704 MacB-like periplasmic core domain VITFI_CDS2656 PF02687 FtsX-like permease family VITFI_CDS2656 PF00005 ABC transporter VITFI_CDS2658 PF02321 Outer membrane efflux protein VITFI_CDS2659 PF01266 FAD dependent oxidoreductase VITFI_CDS2660 PF08946 Osmosensory transporter coiled coil VITFI_CDS2660 PF00083 Sugar (and other) transporter VITFI_CDS2664 PF02719 Polysaccharide biosynthesis protein VITFI_CDS2666 PF02678 Pirin VITFI_CDS2666 PF17954 Quercetinase C-terminal cupin domain VITFI_CDS2667 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2667 PF03466 LysR substrate binding domain VITFI_CDS2668 PF00749 tRNA synthetases class I (E and Q), catalytic domain VITFI_CDS2669 PF00730 HhH-GPD superfamily base excision DNA repair protein VITFI_CDS2669 PF00633 Helix-hairpin-helix motif VITFI_CDS2669 PF10576 Iron-sulfur binding domain of endonuclease III VITFI_CDS2669 PF14815 NUDIX domain VITFI_CDS2670 PF00350 Dynamin family VITFI_CDS2671 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VITFI_CDS2671 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VITFI_CDS2671 PF06827 Zinc finger found in FPG and IleRS VITFI_CDS2672 PF01176 Translation initiation factor 1A / IF-1 VITFI_CDS2673 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VITFI_CDS2676 PF03550 Outer membrane lipoprotein LolB VITFI_CDS2677 PF00288 GHMP kinases N terminal domain VITFI_CDS2678 PF14572 Phosphoribosyl synthetase-associated domain VITFI_CDS2678 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VITFI_CDS2679 PF14693 Ribosomal protein TL5, C-terminal domain VITFI_CDS2679 PF01386 Ribosomal L25p family VITFI_CDS2681 PF03466 LysR substrate binding domain VITFI_CDS2681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2682 PF01195 Peptidyl-tRNA hydrolase VITFI_CDS2684 PF00037 4Fe-4S binding domain VITFI_CDS2685 PF01467 Cytidylyltransferase-like VITFI_CDS2687 PF00977 Histidine biosynthesis protein VITFI_CDS2688 PF00977 Histidine biosynthesis protein VITFI_CDS2689 PF00117 Glutamine amidotransferase class-I VITFI_CDS2690 PF00475 Imidazoleglycerol-phosphate dehydratase VITFI_CDS2691 PF00155 Aminotransferase class I and II VITFI_CDS2694 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VITFI_CDS2695 PF01850 PIN domain VITFI_CDS2699 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2699 PF03459 TOBE domain VITFI_CDS2703 PF01634 ATP phosphoribosyltransferase VITFI_CDS2704 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VITFI_CDS2706 PF01061 ABC-2 type transporter VITFI_CDS2707 PF00005 ABC transporter VITFI_CDS2711 PF00884 Sulfatase VITFI_CDS2711 PF12411 Choline sulfatase enzyme C terminal VITFI_CDS2716 PF00575 S1 RNA binding domain VITFI_CDS2716 PF08461 Ribonuclease R winged-helix domain VITFI_CDS2716 PF17876 Cold shock domain VITFI_CDS2716 PF08206 Ribonuclease B OB domain VITFI_CDS2716 PF00773 RNB domain VITFI_CDS2717 PF00156 Phosphoribosyl transferase domain VITFI_CDS2718 PF00709 Adenylosuccinate synthetase VITFI_CDS2719 PF13393 Histidyl-tRNA synthetase VITFI_CDS2721 PF01145 SPFH domain / Band 7 family VITFI_CDS2722 PF01145 SPFH domain / Band 7 family VITFI_CDS2722 PF12221 Bacterial membrane protein N terminal VITFI_CDS2723 PF01926 50S ribosome-binding GTPase VITFI_CDS2723 PF16360 GTP-binding GTPase Middle Region VITFI_CDS2723 PF13167 GTP-binding GTPase N-terminal VITFI_CDS2724 PF17209 Hfq protein VITFI_CDS2725 PF01926 50S ribosome-binding GTPase VITFI_CDS2725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VITFI_CDS2726 PF13360 PQQ-like domain VITFI_CDS2728 PF13393 Histidyl-tRNA synthetase VITFI_CDS2728 PF03129 Anticodon binding domain VITFI_CDS2729 PF04551 GcpE protein VITFI_CDS2732 PF04055 Radical SAM superfamily VITFI_CDS2733 PF00334 Nucleoside diphosphate kinase VITFI_CDS2734 PF00849 RNA pseudouridylate synthase VITFI_CDS2734 PF01479 S4 domain VITFI_CDS2735 PF04079 Segregation and condensation complex subunit ScpB VITFI_CDS2736 PF00849 RNA pseudouridylate synthase VITFI_CDS2736 PF01479 S4 domain VITFI_CDS2737 PF13525 Outer membrane lipoprotein VITFI_CDS2738 PF06733 DEAD_2 VITFI_CDS2738 PF13307 Helicase C-terminal domain VITFI_CDS2740 PF03969 AFG1-like ATPase VITFI_CDS2741 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS2741 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VITFI_CDS2742 PF02817 e3 binding domain VITFI_CDS2742 PF00364 Biotin-requiring enzyme VITFI_CDS2742 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VITFI_CDS2743 PF16078 2-oxoglutarate dehydrogenase N-terminus VITFI_CDS2743 PF00676 Dehydrogenase E1 component VITFI_CDS2743 PF16870 2-oxoglutarate dehydrogenase C-terminal VITFI_CDS2743 PF02779 Transketolase, pyrimidine binding domain VITFI_CDS2745 PF13458 Periplasmic binding protein VITFI_CDS2747 PF00883 Cytosol aminopeptidase family, catalytic domain VITFI_CDS2747 PF02789 Cytosol aminopeptidase family, N-terminal domain VITFI_CDS2748 PF03739 Lipopolysaccharide export system permease LptF/LptG VITFI_CDS2751 PF03466 LysR substrate binding domain VITFI_CDS2751 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2752 PF00155 Aminotransferase class I and II VITFI_CDS2754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2754 PF03459 TOBE domain VITFI_CDS2755 PF00696 Amino acid kinase family VITFI_CDS2756 PF00696 Amino acid kinase family VITFI_CDS2757 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VITFI_CDS2757 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VITFI_CDS2758 PF17850 CysA C-terminal regulatory domain VITFI_CDS2758 PF00005 ABC transporter VITFI_CDS2760 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS2761 PF04891 NifQ VITFI_CDS2762 PF12838 4Fe-4S dicluster domain VITFI_CDS2763 PF05082 Rop-like VITFI_CDS2764 PF03270 Protein of unknown function, DUF269 VITFI_CDS2765 PF02579 Dinitrogenase iron-molybdenum cofactor VITFI_CDS2766 PF00148 Nitrogenase component 1 type Oxidoreductase VITFI_CDS2768 PF05193 Peptidase M16 inactive domain VITFI_CDS2768 PF00675 Insulinase (Peptidase family M16) VITFI_CDS2773 PF00989 PAS fold VITFI_CDS2773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2773 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2773 PF18698 Histidine kinase sensor domain VITFI_CDS2773 PF00672 HAMP domain VITFI_CDS2774 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2774 PF00072 Response regulator receiver domain VITFI_CDS2776 PF01740 STAS domain VITFI_CDS2779 PF00072 Response regulator receiver domain VITFI_CDS2779 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2781 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS2781 PF00072 Response regulator receiver domain VITFI_CDS2782 PF07730 Histidine kinase VITFI_CDS2782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2782 PF05231 MASE1 VITFI_CDS2785 PF12706 Beta-lactamase superfamily domain VITFI_CDS2786 PF03070 TENA/THI-4/PQQC family VITFI_CDS2787 PF05402 Coenzyme PQQ synthesis protein D (PqqD) VITFI_CDS2788 PF13186 Iron-sulfur cluster-binding domain VITFI_CDS2788 PF04055 Radical SAM superfamily VITFI_CDS2790 PF17158 Membrane-associated sensor, integral membrane domain VITFI_CDS2790 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS2791 PF00484 Carbonic anhydrase VITFI_CDS2797 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding VITFI_CDS2797 PF01628 HrcA protein C terminal domain VITFI_CDS2798 PF01513 ATP-NAD kinase VITFI_CDS2799 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS2800 PF03668 P-loop ATPase protein family VITFI_CDS2802 PF00360 Phytochrome region VITFI_CDS2802 PF01590 GAF domain VITFI_CDS2802 PF00563 EAL domain VITFI_CDS2802 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS2803 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS2803 PF01627 Hpt domain VITFI_CDS2803 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2803 PF00672 HAMP domain VITFI_CDS2803 PF00072 Response regulator receiver domain VITFI_CDS2804 PF03466 LysR substrate binding domain VITFI_CDS2804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2805 PF00005 ABC transporter VITFI_CDS2805 PF00664 ABC transporter transmembrane region VITFI_CDS2807 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS2818 PF09957 Bacterial antitoxin of type II TA system, VapB VITFI_CDS2819 PF05685 Putative restriction endonuclease VITFI_CDS2820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS2820 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS2820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS2821 PF01039 Carboxyl transferase domain VITFI_CDS2823 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VITFI_CDS2823 PF00364 Biotin-requiring enzyme VITFI_CDS2823 PF00289 Biotin carboxylase, N-terminal domain VITFI_CDS2823 PF02785 Biotin carboxylase C-terminal domain VITFI_CDS2825 PF00682 HMGL-like VITFI_CDS2826 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2826 PF00072 Response regulator receiver domain VITFI_CDS2826 PF08448 PAS fold VITFI_CDS2826 PF13426 PAS domain VITFI_CDS2827 PF00196 Bacterial regulatory proteins, luxR family VITFI_CDS2827 PF00072 Response regulator receiver domain VITFI_CDS2830 PF02332 Methane/Phenol/Toluene Hydroxylase VITFI_CDS2831 PF06234 Toluene-4-monooxygenase system protein B (TmoB) VITFI_CDS2832 PF00355 Rieske [2Fe-2S] domain VITFI_CDS2834 PF02332 Methane/Phenol/Toluene Hydroxylase VITFI_CDS2835 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS2835 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS2835 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS2836 PF01799 [2Fe-2S] binding domain VITFI_CDS2836 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS2837 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VITFI_CDS2838 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VITFI_CDS2838 PF11890 Domain of unknown function (DUF3410) VITFI_CDS2838 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VITFI_CDS2839 PF12161 HsdM N-terminal domain VITFI_CDS2839 PF02384 N-6 DNA Methylase VITFI_CDS2841 PF06250 YhcG PDDEXK nuclease domain VITFI_CDS2841 PF17761 DUF1016 N-terminal domain VITFI_CDS2842 PF01420 Type I restriction modification DNA specificity domain VITFI_CDS2843 PF04480 Protein of unknown function (DUF559) VITFI_CDS2844 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VITFI_CDS2844 PF08463 EcoEI R protein C-terminal VITFI_CDS2844 PF04851 Type III restriction enzyme, res subunit VITFI_CDS2844 PF00271 Helicase conserved C-terminal domain VITFI_CDS2847 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2847 PF03466 LysR substrate binding domain VITFI_CDS2848 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VITFI_CDS2848 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VITFI_CDS2851 PF01494 FAD binding domain VITFI_CDS2852 PF02803 Thiolase, C-terminal domain VITFI_CDS2852 PF00108 Thiolase, N-terminal domain VITFI_CDS2853 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VITFI_CDS2853 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VITFI_CDS2853 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS2854 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS2854 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS2854 PF12806 Acetyl-CoA dehydrogenase C-terminal like VITFI_CDS2854 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS2859 PF04909 Amidohydrolase VITFI_CDS2860 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VITFI_CDS2861 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VITFI_CDS2862 PF03971 Monomeric isocitrate dehydrogenase VITFI_CDS2865 PF02075 Crossover junction endodeoxyribonuclease RuvC VITFI_CDS2866 PF01808 AICARFT/IMPCHase bienzyme VITFI_CDS2866 PF02142 MGS-like domain VITFI_CDS2867 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS2868 PF01207 Dihydrouridine synthase (Dus) VITFI_CDS2869 PF09335 SNARE associated Golgi protein VITFI_CDS2870 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VITFI_CDS2871 PF02627 Carboxymuconolactone decarboxylase family VITFI_CDS2872 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS2872 PF00585 C-terminal regulatory domain of Threonine dehydratase VITFI_CDS2873 PF02566 OsmC-like protein VITFI_CDS2874 PF03232 Ubiquinone biosynthesis protein COQ7 VITFI_CDS2875 PF13609 Gram-negative porin VITFI_CDS2876 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS2876 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS2877 PF04324 BFD-like [2Fe-2S] binding domain VITFI_CDS2877 PF00148 Nitrogenase component 1 type Oxidoreductase VITFI_CDS2882 PF02810 SEC-C motif VITFI_CDS2882 PF07516 SecA Wing and Scaffold domain VITFI_CDS2882 PF07517 SecA DEAD-like domain VITFI_CDS2882 PF01043 SecA preprotein cross-linking domain VITFI_CDS2883 PF02441 Flavoprotein VITFI_CDS2883 PF04127 DNA / pantothenate metabolism flavoprotein VITFI_CDS2884 PF00692 dUTPase VITFI_CDS2885 PF05685 Putative restriction endonuclease VITFI_CDS2887 PF08007 Cupin superfamily protein VITFI_CDS2889 PF06804 NlpB/DapX lipoprotein VITFI_CDS2890 PF00701 Dihydrodipicolinate synthetase family VITFI_CDS2896 PF00204 DNA gyrase B VITFI_CDS2896 PF00986 DNA gyrase B subunit, carboxyl terminus VITFI_CDS2896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2896 PF01751 Toprim domain VITFI_CDS2897 PF01464 Transglycosylase SLT domain VITFI_CDS2898 PF00521 DNA gyrase/topoisomerase IV, subunit A VITFI_CDS2899 PF00072 Response regulator receiver domain VITFI_CDS2899 PF17149 Periplasmic sensor domain found in signal transduction proteins VITFI_CDS2899 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS2899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS2899 PF00672 HAMP domain VITFI_CDS2899 PF01627 Hpt domain VITFI_CDS2900 PF00072 Response regulator receiver domain VITFI_CDS2900 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS2907 PF00772 DnaB-like helicase N terminal domain VITFI_CDS2907 PF03796 DnaB-like helicase C terminal domain VITFI_CDS2912 PF00589 Phage integrase family VITFI_CDS2912 PF13356 Arm DNA-binding domain VITFI_CDS2913 PF02390 Putative methyltransferase VITFI_CDS2914 PF02673 Bacitracin resistance protein BacA VITFI_CDS2916 PF17922 Tetracyclin repressor-like, C-terminal domain VITFI_CDS2916 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS2917 PF13533 Biotin-lipoyl like VITFI_CDS2918 PF00873 AcrB/AcrD/AcrF family VITFI_CDS2921 PF02321 Outer membrane efflux protein VITFI_CDS2922 PF00534 Glycosyl transferases group 1 VITFI_CDS2922 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VITFI_CDS2923 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VITFI_CDS2923 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VITFI_CDS2923 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VITFI_CDS2923 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VITFI_CDS2924 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VITFI_CDS2924 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VITFI_CDS2926 PF00749 tRNA synthetases class I (E and Q), catalytic domain VITFI_CDS2927 PF00156 Phosphoribosyl transferase domain VITFI_CDS2929 PF08245 Mur ligase middle domain VITFI_CDS2929 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS2930 PF17848 Acetyl-coA carboxylase zinc finger domain VITFI_CDS2930 PF01039 Carboxyl transferase domain VITFI_CDS2931 PF00290 Tryptophan synthase alpha chain VITFI_CDS2932 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS2933 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VITFI_CDS2934 PF01416 tRNA pseudouridine synthase VITFI_CDS2936 PF02774 Semialdehyde dehydrogenase, dimerisation domain VITFI_CDS2936 PF01118 Semialdehyde dehydrogenase, NAD binding domain VITFI_CDS2937 PF00180 Isocitrate/isopropylmalate dehydrogenase VITFI_CDS2938 PF00694 Aconitase C-terminal domain VITFI_CDS2939 PF00330 Aconitase family (aconitate hydratase) VITFI_CDS2941 PF01053 Cys/Met metabolism PLP-dependent enzyme VITFI_CDS2942 PF00501 AMP-binding enzyme VITFI_CDS2942 PF16177 Acetyl-coenzyme A synthetase N-terminus VITFI_CDS2942 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS2944 PF00141 Peroxidase VITFI_CDS2945 PF00067 Cytochrome P450 VITFI_CDS2947 PF00155 Aminotransferase class I and II VITFI_CDS2948 PF00202 Aminotransferase class-III VITFI_CDS2950 PF00289 Biotin carboxylase, N-terminal domain VITFI_CDS2950 PF02785 Biotin carboxylase C-terminal domain VITFI_CDS2950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VITFI_CDS2951 PF01039 Carboxyl transferase domain VITFI_CDS2954 PF02310 B12 binding domain VITFI_CDS2954 PF01642 Methylmalonyl-CoA mutase VITFI_CDS2955 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS2955 PF07729 FCD domain VITFI_CDS2961 PF00285 Citrate synthase, C-terminal domain VITFI_CDS2962 PF03937 Flavinator of succinate dehydrogenase VITFI_CDS2963 PF13085 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS2964 PF02910 Fumarate reductase flavoprotein C-term VITFI_CDS2964 PF00890 FAD binding domain VITFI_CDS2967 PF00392 Bacterial regulatory proteins, gntR family VITFI_CDS2967 PF07702 UTRA domain VITFI_CDS2968 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VITFI_CDS2968 PF00056 lactate/malate dehydrogenase, NAD binding domain VITFI_CDS2970 PF00330 Aconitase family (aconitate hydratase) VITFI_CDS2970 PF06434 Aconitate hydratase 2 N-terminus VITFI_CDS2970 PF11791 Aconitate B N-terminal domain VITFI_CDS2971 PF04480 Protein of unknown function (DUF559) VITFI_CDS2973 PF00929 Exonuclease VITFI_CDS2974 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS2974 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS2974 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS2978 PF00291 Pyridoxal-phosphate dependent enzyme VITFI_CDS2979 PF01206 Sulfurtransferase TusA VITFI_CDS2980 PF00483 Nucleotidyl transferase VITFI_CDS2983 PF07726 ATPase family associated with various cellular activities (AAA) VITFI_CDS2983 PF17863 AAA lid domain VITFI_CDS2984 PF01609 Transposase DDE domain VITFI_CDS2989 PF01810 LysE type translocator VITFI_CDS2990 PF03466 LysR substrate binding domain VITFI_CDS2990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS2991 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS2991 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS2991 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS2992 PF02515 CoA-transferase family III VITFI_CDS2994 PF04377 Arginine-tRNA-protein transferase, C terminus VITFI_CDS2994 PF04376 Arginine-tRNA-protein transferase, N terminus VITFI_CDS2995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VITFI_CDS2996 PF00892 EamA-like transporter family VITFI_CDS2997 PF00072 Response regulator receiver domain VITFI_CDS2997 PF04397 LytTr DNA-binding domain VITFI_CDS2998 PF14698 Argininosuccinate lyase C-terminal VITFI_CDS2998 PF00206 Lyase VITFI_CDS3002 PF01336 OB-fold nucleic acid binding domain VITFI_CDS3002 PF02938 GAD domain VITFI_CDS3002 PF00152 tRNA synthetases class II (D, K and N) VITFI_CDS3005 PF03109 ABC1 family VITFI_CDS3007 PF16363 GDP-mannose 4,6 dehydratase VITFI_CDS3008 PF01209 ubiE/COQ5 methyltransferase family VITFI_CDS3011 PF04393 Protein of unknown function (DUF535) VITFI_CDS3019 PF01329 Pterin 4 alpha carbinolamine dehydratase VITFI_CDS3021 PF00293 NUDIX domain VITFI_CDS3022 PF03372 Endonuclease/Exonuclease/phosphatase family VITFI_CDS3023 PF13091 PLD-like domain VITFI_CDS3027 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VITFI_CDS3031 PF00664 ABC transporter transmembrane region VITFI_CDS3031 PF00005 ABC transporter VITFI_CDS3032 PF08443 RimK-like ATP-grasp domain VITFI_CDS3032 PF08245 Mur ligase middle domain VITFI_CDS3032 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS3033 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS3033 PF08245 Mur ligase middle domain VITFI_CDS3033 PF08443 RimK-like ATP-grasp domain VITFI_CDS3037 PF00535 Glycosyl transferase family 2 VITFI_CDS3038 PF00535 Glycosyl transferase family 2 VITFI_CDS3044 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VITFI_CDS3044 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VITFI_CDS3044 PF00205 Thiamine pyrophosphate enzyme, central domain VITFI_CDS3046 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VITFI_CDS3047 PF16363 GDP-mannose 4,6 dehydratase VITFI_CDS3048 PF00483 Nucleotidyl transferase VITFI_CDS3050 PF00155 Aminotransferase class I and II VITFI_CDS3051 PF00202 Aminotransferase class-III VITFI_CDS3052 PF00005 ABC transporter VITFI_CDS3052 PF08402 TOBE domain VITFI_CDS3054 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS3055 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS3056 PF00171 Aldehyde dehydrogenase family VITFI_CDS3059 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS3059 PF00501 AMP-binding enzyme VITFI_CDS3060 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS3062 PF01553 Acyltransferase VITFI_CDS3063 PF01979 Amidohydrolase family VITFI_CDS3064 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VITFI_CDS3064 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VITFI_CDS3065 PF00156 Phosphoribosyl transferase domain VITFI_CDS3066 PF03652 Holliday junction resolvase VITFI_CDS3067 PF02622 Uncharacterized ACR, COG1678 VITFI_CDS3068 PF03441 FAD binding domain of DNA photolyase VITFI_CDS3068 PF00875 DNA photolyase VITFI_CDS3069 PF02895 Signal transducing histidine kinase, homodimeric domain VITFI_CDS3069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3069 PF01584 CheW-like domain VITFI_CDS3069 PF07194 P2 response regulator binding domain VITFI_CDS3069 PF01627 Hpt domain VITFI_CDS3070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VITFI_CDS3070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VITFI_CDS3072 PF00072 Response regulator receiver domain VITFI_CDS3073 PF00072 Response regulator receiver domain VITFI_CDS3074 PF00301 Rubredoxin VITFI_CDS3076 PF00202 Aminotransferase class-III VITFI_CDS3078 PF02875 Mur ligase family, glutamate ligase domain VITFI_CDS3078 PF01225 Mur ligase family, catalytic domain VITFI_CDS3078 PF08245 Mur ligase middle domain VITFI_CDS3082 PF00773 RNB domain VITFI_CDS3084 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VITFI_CDS3084 PF08501 Shikimate dehydrogenase substrate binding domain VITFI_CDS3084 PF01488 Shikimate / quinate 5-dehydrogenase VITFI_CDS3085 PF00912 Transglycosylase VITFI_CDS3087 PF00364 Biotin-requiring enzyme VITFI_CDS3088 PF00289 Biotin carboxylase, N-terminal domain VITFI_CDS3088 PF02785 Biotin carboxylase C-terminal domain VITFI_CDS3088 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VITFI_CDS3091 PF00294 pfkB family carbohydrate kinase VITFI_CDS3093 PF00268 Ribonucleotide reductase, small chain VITFI_CDS3094 PF00317 Ribonucleotide reductase, all-alpha domain VITFI_CDS3094 PF03477 ATP cone domain VITFI_CDS3094 PF02867 Ribonucleotide reductase, barrel domain VITFI_CDS3096 PF01510 N-acetylmuramoyl-L-alanine amidase VITFI_CDS3097 PF00072 Response regulator receiver domain VITFI_CDS3097 PF00158 Sigma-54 interaction domain VITFI_CDS3097 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS3098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3098 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3099 PF01578 Cytochrome C assembly protein VITFI_CDS3100 PF02978 Signal peptide binding domain VITFI_CDS3100 PF02881 SRP54-type protein, helical bundle domain VITFI_CDS3100 PF00448 SRP54-type protein, GTPase domain VITFI_CDS3101 PF02881 SRP54-type protein, helical bundle domain VITFI_CDS3101 PF00448 SRP54-type protein, GTPase domain VITFI_CDS3102 PF04055 Radical SAM superfamily VITFI_CDS3102 PF00919 Uncharacterized protein family UPF0004 VITFI_CDS3102 PF01938 TRAM domain VITFI_CDS3104 PF01488 Shikimate / quinate 5-dehydrogenase VITFI_CDS3104 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VITFI_CDS3104 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VITFI_CDS3105 PF03462 PCRF domain VITFI_CDS3105 PF00472 RF-1 domain VITFI_CDS3106 PF17827 PrmC N-terminal domain VITFI_CDS3106 PF05175 Methyltransferase small domain VITFI_CDS3107 PF00462 Glutaredoxin VITFI_CDS3108 PF02441 Flavoprotein VITFI_CDS3109 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VITFI_CDS3109 PF01464 Transglycosylase SLT domain VITFI_CDS3110 PF04073 Aminoacyl-tRNA editing domain VITFI_CDS3110 PF03129 Anticodon binding domain VITFI_CDS3110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VITFI_CDS3111 PF00293 NUDIX domain VITFI_CDS3112 PF00696 Amino acid kinase family VITFI_CDS3112 PF01472 PUA domain VITFI_CDS3113 PF01926 50S ribosome-binding GTPase VITFI_CDS3113 PF01018 GTP1/OBG VITFI_CDS3114 PF01016 Ribosomal L27 protein VITFI_CDS3115 PF00829 Ribosomal prokaryotic L21 protein VITFI_CDS3116 PF00348 Polyprenyl synthetase VITFI_CDS3117 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VITFI_CDS3117 PF00437 Type II/IV secretion system protein VITFI_CDS3118 PF00482 Type II secretion system (T2SS), protein F VITFI_CDS3119 PF06750 Bacterial Peptidase A24 N-terminal domain VITFI_CDS3119 PF01478 Type IV leader peptidase family VITFI_CDS3120 PF01121 Dephospho-CoA kinase VITFI_CDS3121 PF07072 Cell division protein VITFI_CDS3124 PF00311 Phosphoenolpyruvate carboxylase VITFI_CDS3125 PF03900 Porphobilinogen deaminase, C-terminal domain VITFI_CDS3125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VITFI_CDS3126 PF02602 Uroporphyrinogen-III synthase HemD VITFI_CDS3129 PF02803 Thiolase, C-terminal domain VITFI_CDS3129 PF00108 Thiolase, N-terminal domain VITFI_CDS3130 PF01144 Coenzyme A transferase VITFI_CDS3132 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS3133 PF00501 AMP-binding enzyme VITFI_CDS3133 PF13193 AMP-binding enzyme C-terminal domain VITFI_CDS3134 PF00106 short chain dehydrogenase VITFI_CDS3137 PF00005 ABC transporter VITFI_CDS3137 PF12399 Branched-chain amino acid ATP-binding cassette transporter VITFI_CDS3138 PF00005 ABC transporter VITFI_CDS3139 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VITFI_CDS3139 PF12806 Acetyl-CoA dehydrogenase C-terminal like VITFI_CDS3139 PF02770 Acyl-CoA dehydrogenase, middle domain VITFI_CDS3139 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VITFI_CDS3142 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VITFI_CDS3144 PF09828 Chromate resistance exported protein VITFI_CDS3146 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) VITFI_CDS3147 PF00690 Cation transporter/ATPase, N-terminus VITFI_CDS3147 PF00689 Cation transporting ATPase, C-terminus VITFI_CDS3148 PF04303 PrpF protein VITFI_CDS3149 PF01272 Transcription elongation factor, GreA/GreB, C-term VITFI_CDS3149 PF03449 Transcription elongation factor, N-terminal VITFI_CDS3150 PF04286 Protein of unknown function (DUF445) VITFI_CDS3151 PF04341 Protein of unknown function, DUF485 VITFI_CDS3152 PF00474 Sodium:solute symporter family VITFI_CDS3153 PF03453 MoeA N-terminal region (domain I and II) VITFI_CDS3153 PF00994 Probable molybdopterin binding domain VITFI_CDS3153 PF03454 MoeA C-terminal region (domain IV) VITFI_CDS3154 PF07703 Alpha-2-macroglobulin bait region domain VITFI_CDS3154 PF01835 MG2 domain VITFI_CDS3154 PF00207 Alpha-2-macroglobulin family VITFI_CDS3155 PF00912 Transglycosylase VITFI_CDS3155 PF00905 Penicillin binding protein transpeptidase domain VITFI_CDS3157 PF00482 Type II secretion system (T2SS), protein F VITFI_CDS3158 PF00437 Type II/IV secretion system protein VITFI_CDS3159 PF03958 Bacterial type II/III secretion system short domain VITFI_CDS3159 PF00263 Bacterial type II and III secretion system protein VITFI_CDS3163 PF03934 Type II secretion system (T2SS), protein K VITFI_CDS3164 PF11612 Type II secretion system (T2SS), protein J VITFI_CDS3164 PF07963 Prokaryotic N-terminal methylation motif VITFI_CDS3167 PF08334 Type II secretion system (T2SS), protein G VITFI_CDS3167 PF07963 Prokaryotic N-terminal methylation motif VITFI_CDS3170 PF00589 Phage integrase family VITFI_CDS3170 PF13495 Phage integrase, N-terminal SAM-like domain VITFI_CDS3172 PF03144 Elongation factor Tu domain 2 VITFI_CDS3172 PF14492 Elongation Factor G, domain II VITFI_CDS3172 PF00009 Elongation factor Tu GTP binding domain VITFI_CDS3172 PF03764 Elongation factor G, domain IV VITFI_CDS3172 PF00679 Elongation factor G C-terminus VITFI_CDS3176 PF00593 TonB dependent receptor VITFI_CDS3176 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS3177 PF01475 Ferric uptake regulator family VITFI_CDS3179 PF01618 MotA/TolQ/ExbB proton channel family VITFI_CDS3180 PF02472 Biopolymer transport protein ExbD/TolR VITFI_CDS3181 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS3181 PF07660 Secretin and TonB N terminus short domain VITFI_CDS3181 PF00593 TonB dependent receptor VITFI_CDS3182 PF13640 2OG-Fe(II) oxygenase superfamily VITFI_CDS3182 PF18331 PKHD-type hydroxylase C-terminal domain VITFI_CDS3189 PF02463 RecF/RecN/SMC N terminal domain VITFI_CDS3195 PF06071 Protein of unknown function (DUF933) VITFI_CDS3195 PF01926 50S ribosome-binding GTPase VITFI_CDS3205 PF01494 FAD binding domain VITFI_CDS3206 PF10411 Disulfide bond isomerase protein N-terminus VITFI_CDS3206 PF13098 Thioredoxin-like domain VITFI_CDS3210 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS3211 PF03033 Glycosyltransferase family 28 N-terminal domain VITFI_CDS3211 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase VITFI_CDS3214 PF00067 Cytochrome P450 VITFI_CDS3216 PF01070 FMN-dependent dehydrogenase VITFI_CDS3221 PF03737 Aldolase/RraA VITFI_CDS3222 PF04909 Amidohydrolase VITFI_CDS3223 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit VITFI_CDS3224 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VITFI_CDS3225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VITFI_CDS3226 PF00248 Aldo/keto reductase family VITFI_CDS3230 PF09820 Predicted AAA-ATPase VITFI_CDS3230 PF08011 PD-(D/E)XK nuclease superfamily VITFI_CDS3231 PF07992 Pyridine nucleotide-disulphide oxidoreductase VITFI_CDS3231 PF14759 Reductase C-terminal VITFI_CDS3232 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS3233 PF00067 Cytochrome P450 VITFI_CDS3236 PF01627 Hpt domain VITFI_CDS3236 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS3236 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3236 PF00072 Response regulator receiver domain VITFI_CDS3236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3236 PF00672 HAMP domain VITFI_CDS3239 PF07690 Major Facilitator Superfamily VITFI_CDS3257 PF04262 Glutamate-cysteine ligase VITFI_CDS3259 PF00497 Bacterial extracellular solute-binding proteins, family 3 VITFI_CDS3260 PF17763 Glutaminase/Asparaginase C-terminal domain VITFI_CDS3260 PF00710 Asparaginase, N-terminal VITFI_CDS3261 PF00497 Bacterial extracellular solute-binding proteins, family 3 VITFI_CDS3262 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS3263 PF00528 Binding-protein-dependent transport system inner membrane component VITFI_CDS3264 PF00005 ABC transporter VITFI_CDS3265 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3265 PF02743 Cache domain VITFI_CDS3265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3266 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS3266 PF00072 Response regulator receiver domain VITFI_CDS3266 PF00158 Sigma-54 interaction domain VITFI_CDS3274 PF01565 FAD binding domain VITFI_CDS3274 PF02913 FAD linked oxidases, C-terminal domain VITFI_CDS3276 PF13614 AAA domain VITFI_CDS3280 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS3280 PF17938 Tetracyclin repressor-like, C-terminal domain VITFI_CDS3282 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS3282 PF00072 Response regulator receiver domain VITFI_CDS3282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3282 PF01627 Hpt domain VITFI_CDS3282 PF00672 HAMP domain VITFI_CDS3282 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3283 PF13614 AAA domain VITFI_CDS3283 PF00376 MerR family regulatory protein VITFI_CDS3284 PF02195 ParB-like nuclease domain VITFI_CDS3284 PF07506 RepB plasmid partitioning protein VITFI_CDS3285 PF02308 MgtC family VITFI_CDS3286 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VITFI_CDS3287 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VITFI_CDS3288 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS3289 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VITFI_CDS3289 PF08501 Shikimate dehydrogenase substrate binding domain VITFI_CDS3290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VITFI_CDS3293 PF03060 Nitronate monooxygenase VITFI_CDS3294 PF01220 Dehydroquinase class II VITFI_CDS3297 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VITFI_CDS3298 PF00171 Aldehyde dehydrogenase family VITFI_CDS3299 PF01557 Fumarylacetoacetate (FAA) hydrolase family VITFI_CDS3300 PF01557 Fumarylacetoacetate (FAA) hydrolase family VITFI_CDS3304 PF01047 MarR family VITFI_CDS3306 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VITFI_CDS3306 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VITFI_CDS3306 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VITFI_CDS3306 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VITFI_CDS3309 PF01497 Periplasmic binding protein VITFI_CDS3310 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VITFI_CDS3311 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VITFI_CDS3311 PF07685 CobB/CobQ-like glutamine amidotransferase domain VITFI_CDS3315 PF02654 Cobalamin-5-phosphate synthase VITFI_CDS3317 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS3317 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VITFI_CDS3318 PF00881 Nitroreductase family VITFI_CDS3319 PF01890 Cobalamin synthesis G C-terminus VITFI_CDS3319 PF11761 Cobalamin biosynthesis central region VITFI_CDS3319 PF11760 Cobalamin synthesis G N-terminal VITFI_CDS3321 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS3322 PF01888 CbiD VITFI_CDS3323 PF02570 Precorrin-8X methylmutase VITFI_CDS3324 PF01903 CbiX VITFI_CDS3325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VITFI_CDS3327 PF00155 Aminotransferase class I and II VITFI_CDS3328 PF03186 CobD/Cbib protein VITFI_CDS3330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS3330 PF03466 LysR substrate binding domain VITFI_CDS3332 PF02277 Phosphoribosyltransferase VITFI_CDS3333 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VITFI_CDS3333 PF12557 Cob(I)alamin adenosyltransferase N terminal VITFI_CDS3334 PF00005 ABC transporter VITFI_CDS3335 PF01032 FecCD transport family VITFI_CDS3337 PF07715 TonB-dependent Receptor Plug Domain VITFI_CDS3337 PF00593 TonB dependent receptor VITFI_CDS3339 PF00072 Response regulator receiver domain VITFI_CDS3339 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS3339 PF00158 Sigma-54 interaction domain VITFI_CDS3340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3340 PF00072 Response regulator receiver domain VITFI_CDS3340 PF13188 PAS domain VITFI_CDS3340 PF08448 PAS fold VITFI_CDS3340 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3341 PF00034 Cytochrome c VITFI_CDS3341 PF14376 Haem-binding domain VITFI_CDS3341 PF03150 Di-haem cytochrome c peroxidase VITFI_CDS3345 PF04055 Radical SAM superfamily VITFI_CDS3348 PF13180 PDZ domain VITFI_CDS3351 PF00107 Zinc-binding dehydrogenase VITFI_CDS3351 PF08240 Alcohol dehydrogenase GroES-like domain VITFI_CDS3352 PF00756 Putative esterase VITFI_CDS3357 PF02384 N-6 DNA Methylase VITFI_CDS3357 PF12161 HsdM N-terminal domain VITFI_CDS3358 PF00271 Helicase conserved C-terminal domain VITFI_CDS3358 PF08463 EcoEI R protein C-terminal VITFI_CDS3358 PF04851 Type III restriction enzyme, res subunit VITFI_CDS3358 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VITFI_CDS3359 PF13185 GAF domain VITFI_CDS3359 PF02954 Bacterial regulatory protein, Fis family VITFI_CDS3359 PF00158 Sigma-54 interaction domain VITFI_CDS3362 PF03401 Tripartite tricarboxylate transporter family receptor VITFI_CDS3363 PF00149 Calcineurin-like phosphoesterase VITFI_CDS3365 PF00149 Calcineurin-like phosphoesterase VITFI_CDS3365 PF12320 Type 5 capsule protein repressor C-terminal domain VITFI_CDS3369 PF09587 Bacterial capsule synthesis protein PGA_cap VITFI_CDS3371 PF13417 Glutathione S-transferase, N-terminal domain VITFI_CDS3372 PF01557 Fumarylacetoacetate (FAA) hydrolase family VITFI_CDS3373 PF07883 Cupin domain VITFI_CDS3374 PF01494 FAD binding domain VITFI_CDS3377 PF12706 Beta-lactamase superfamily domain VITFI_CDS3380 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system VITFI_CDS3381 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VITFI_CDS3382 PF01169 Uncharacterized protein family UPF0016 VITFI_CDS3384 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS3387 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VITFI_CDS3391 PF01053 Cys/Met metabolism PLP-dependent enzyme VITFI_CDS3395 PF02515 CoA-transferase family III VITFI_CDS3396 PF01926 50S ribosome-binding GTPase VITFI_CDS3397 PF00684 DnaJ central domain VITFI_CDS3397 PF00226 DnaJ domain VITFI_CDS3397 PF01556 DnaJ C terminal domain VITFI_CDS3399 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS3399 PF13185 GAF domain VITFI_CDS3400 PF01757 Acyltransferase family VITFI_CDS3402 PF03328 HpcH/HpaI aldolase/citrate lyase family VITFI_CDS3403 PF08546 Ketopantoate reductase PanE/ApbA C terminal VITFI_CDS3403 PF02558 Ketopantoate reductase PanE/ApbA VITFI_CDS3404 PF00596 Class II Aldolase and Adducin N-terminal domain VITFI_CDS3405 PF01557 Fumarylacetoacetate (FAA) hydrolase family VITFI_CDS3407 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS3407 PF00072 Response regulator receiver domain VITFI_CDS3408 PF00672 HAMP domain VITFI_CDS3408 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3409 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS3409 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS3409 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS3411 PF07804 HipA-like C-terminal domain VITFI_CDS3412 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS3412 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS3412 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS3415 PF00171 Aldehyde dehydrogenase family VITFI_CDS3415 PF01575 MaoC like domain VITFI_CDS3417 PF02803 Thiolase, C-terminal domain VITFI_CDS3417 PF00108 Thiolase, N-terminal domain VITFI_CDS3418 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS3418 PF08361 MAATS-type transcriptional repressor, C-terminal region VITFI_CDS3419 PF00175 Oxidoreductase NAD-binding domain VITFI_CDS3419 PF00111 2Fe-2S iron-sulfur cluster binding domain VITFI_CDS3419 PF00970 Oxidoreductase FAD-binding domain VITFI_CDS3420 PF01883 Iron-sulfur cluster assembly protein VITFI_CDS3421 PF05138 Phenylacetic acid catabolic protein VITFI_CDS3422 PF06243 Phenylacetic acid degradation B VITFI_CDS3423 PF05138 Phenylacetic acid catabolic protein VITFI_CDS3425 PF03061 Thioesterase superfamily VITFI_CDS3426 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VITFI_CDS3426 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VITFI_CDS3426 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VITFI_CDS3427 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS3429 PF00132 Bacterial transferase hexapeptide (six repeats) VITFI_CDS3430 PF00378 Enoyl-CoA hydratase/isomerase VITFI_CDS3431 PF01738 Dienelactone hydrolase family VITFI_CDS3432 PF03466 LysR substrate binding domain VITFI_CDS3432 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VITFI_CDS3437 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3437 PF00672 HAMP domain VITFI_CDS3437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3437 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VITFI_CDS3437 PF00072 Response regulator receiver domain VITFI_CDS3437 PF01627 Hpt domain VITFI_CDS3439 PF00589 Phage integrase family VITFI_CDS3439 PF02899 Phage integrase, N-terminal SAM-like domain VITFI_CDS3440 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS3440 PF03707 Bacterial signalling protein N terminal repeat VITFI_CDS3440 PF00563 EAL domain VITFI_CDS3441 PF08521 Two-component sensor kinase N-terminal VITFI_CDS3441 PF00512 His Kinase A (phospho-acceptor) domain VITFI_CDS3441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VITFI_CDS3442 PF00072 Response regulator receiver domain VITFI_CDS3442 PF00486 Transcriptional regulatory protein, C terminal VITFI_CDS3445 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS3445 PF07694 5TMR of 5TMR-LYT VITFI_CDS3446 PF02253 Phospholipase A1 VITFI_CDS3452 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VITFI_CDS3452 PF00529 HlyD membrane-fusion protein of T1SS VITFI_CDS3453 PF00873 AcrB/AcrD/AcrF family VITFI_CDS3454 PF02321 Outer membrane efflux protein VITFI_CDS3456 PF02754 Cysteine-rich domain VITFI_CDS3456 PF13183 4Fe-4S dicluster domain VITFI_CDS3457 PF01565 FAD binding domain VITFI_CDS3458 PF01565 FAD binding domain VITFI_CDS3458 PF02913 FAD linked oxidases, C-terminal domain VITFI_CDS3461 PF00561 alpha/beta hydrolase fold VITFI_CDS3467 PF08534 Redoxin VITFI_CDS3468 PF01578 Cytochrome C assembly protein VITFI_CDS3468 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VITFI_CDS3471 PF01578 Cytochrome C assembly protein VITFI_CDS3472 PF03379 CcmB protein VITFI_CDS3473 PF00005 ABC transporter VITFI_CDS3476 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VITFI_CDS3476 PF00384 Molybdopterin oxidoreductase VITFI_CDS3476 PF01568 Molydopterin dinucleotide binding domain VITFI_CDS3477 PF12800 4Fe-4S binding domain VITFI_CDS3477 PF12838 4Fe-4S dicluster domain VITFI_CDS3478 PF12801 4Fe-4S binding domain VITFI_CDS3478 PF12837 4Fe-4S binding domain VITFI_CDS3479 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VITFI_CDS3480 PF03264 NapC/NirT cytochrome c family, N-terminal region VITFI_CDS3481 PF01867 CRISPR associated protein Cas1 VITFI_CDS3482 PF18019 HD domain VITFI_CDS3484 PF01850 PIN domain VITFI_CDS3486 PF09611 CRISPR-associated protein (Cas_Csy1) VITFI_CDS3487 PF09614 CRISPR-associated protein (Cas_Csy2) VITFI_CDS3488 PF09615 CRISPR-associated protein (Cas_Csy3) VITFI_CDS3489 PF09618 CRISPR-associated protein (Cas_Csy4) VITFI_CDS3490 PF02666 Phosphatidylserine decarboxylase VITFI_CDS3491 PF01804 Penicillin amidase VITFI_CDS3492 PF01590 GAF domain VITFI_CDS3492 PF00989 PAS fold VITFI_CDS3492 PF00563 EAL domain VITFI_CDS3492 PF00990 Diguanylate cyclase, GGDEF domain VITFI_CDS3495 PF15975 Flotillin VITFI_CDS3495 PF01145 SPFH domain / Band 7 family VITFI_CDS3496 PF07290 Protein of unknown function (DUF1449) VITFI_CDS3499 PF03480 Bacterial extracellular solute-binding protein, family 7 VITFI_CDS3501 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VITFI_CDS3502 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VITFI_CDS3502 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit VITFI_CDS3503 PF13180 PDZ domain VITFI_CDS3506 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain VITFI_CDS3506 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain VITFI_CDS3526 PF07015 VirC1 protein VITFI_CDS3529 PF13419 Haloacid dehalogenase-like hydrolase VITFI_CDS3531 PF04221 RelB antitoxin VITFI_CDS3532 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ VITFI_CDS3538 PF04555 Restriction endonuclease XhoI VITFI_CDS3539 PF12950 TaqI-like C-terminal specificity domain VITFI_CDS3539 PF07669 Eco57I restriction-modification methylase VITFI_CDS3540 PF02796 Helix-turn-helix domain of resolvase VITFI_CDS3540 PF00239 Resolvase, N terminal domain VITFI_CDS3541 PF00440 Bacterial regulatory proteins, tetR family VITFI_CDS3544 PF00005 ABC transporter VITFI_CDS3546 PF02321 Outer membrane efflux protein VITFI_CDS3547 PF02796 Helix-turn-helix domain of resolvase VITFI_CDS3547 PF00239 Resolvase, N terminal domain VITFI_CDS3554 PF16793 RepB DNA-primase from phage plasmid VITFI_CDS3557 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain