locus-tag	class	description
LVJ82_00030	COG0583	DNA-binding transcription factor activity
LVJ82_00060	COG4172	Belongs to the ABC transporter superfamily
LVJ82_00100	COG5544	Lipoprotein
LVJ82_00105	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LVJ82_00115	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ82_00115	COG2813	Specifically methylates the guanine in position
LVJ82_00130	COG0463	Glycosyl transferase, family 2
LVJ82_00145	COG5510	response to toxic substance
LVJ82_00160	COG2995	paraquat-inducible protein a
LVJ82_00185	COG2153	protein acetylation
LVJ82_00195	COG0697	spore germination
LVJ82_00255	COG0583	DNA-binding transcription factor activity
LVJ82_00275	COG2251	uridine kinase activity
LVJ82_00275	COG0195	Participates in both transcription termination and antitermination
LVJ82_00325	COG2764	glyoxalase bleomycin resistance protein dioxygenase
LVJ82_00335	COG1115	amino acid carrier protein
LVJ82_00355	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LVJ82_00360	COG0511	ligase activity, forming carbon-carbon bonds
LVJ82_00370	COG2264	protein methyltransferase activity
LVJ82_00415	COG2914	Belongs to the UPF0125 (RnfH) family
LVJ82_00425	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LVJ82_00440	COG0582	viral genome integration into host DNA
LVJ82_00550	COG3646	Phage regulatory protein
LVJ82_00630	COG1783	phage Terminase large subunit
LVJ82_00710	COG3561	AntA/AntB antirepressor
LVJ82_00885	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LVJ82_00920	COG0297	glycogen (starch) synthase activity
LVJ82_01040	COG2369	cell adhesion
LVJ82_01130	COG4396	Host-nuclease inhibitor protein Gam
LVJ82_01175	COG3423	Transcriptional regulator
LVJ82_01190	COG1454	alcohol dehydrogenase
LVJ82_01195	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LVJ82_01195	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LVJ82_01195	COG0506	proline dehydrogenase activity
LVJ82_01200	COG0477	Major facilitator Superfamily
LVJ82_01210	COG0235	Class ii aldolase
LVJ82_01215	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_01220	COG1177	transmembrane transport
LVJ82_01225	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ82_01230	COG3842	ATPase activity
LVJ82_01240	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LVJ82_01245	COG1802	Transcriptional regulator
LVJ82_01255	COG1132	(ABC) transporter
LVJ82_01270	COG2431	L-lysine efflux transmembrane transporter activity
LVJ82_01280	COG1132	(ABC) transporter
LVJ82_01295	COG0859	PFAM glycosyl transferase family 9
LVJ82_01300	COG0427	acetyl-CoA hydrolase
LVJ82_01305	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LVJ82_01310	COG0385	Bile acid
LVJ82_01320	COG0405	Gamma-glutamyltransferase
LVJ82_01340	COG2824	Alkylphosphonate utilization operon protein PhnA
LVJ82_01365	COG2271	Major facilitator Superfamily
LVJ82_01435	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LVJ82_01440	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ82_01450	COG0583	DNA-binding transcription factor activity
LVJ82_01455	COG0436	Aminotransferase
LVJ82_01480	COG0084	hydrolase, TatD family'
LVJ82_01490	COG0010	Belongs to the arginase family
LVJ82_01500	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_01505	COG3733	amine oxidase
LVJ82_01515	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LVJ82_01535	COG4890	Cyd operon protein YbgT
LVJ82_01540	COG1294	oxidase, subunit
LVJ82_01565	COG0833	amino acid
LVJ82_01570	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LVJ82_01585	COG0174	glutamine synthetase
LVJ82_01590	COG1737	Transcriptional regulator
LVJ82_01590	COG0837	glucose binding
LVJ82_01615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ82_01625	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LVJ82_01625	COG2508	Transcriptional regulator
LVJ82_01630	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LVJ82_01640	COG0579	oxidoreductase
LVJ82_01650	COG2271	Major facilitator Superfamily
LVJ82_01660	COG0251	oxidation-reduction process
LVJ82_01665	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LVJ82_01675	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ82_01680	COG0235	Class ii aldolase
LVJ82_01710	COG0439	Biotin carboxylase
LVJ82_01715	COG0511	ligase activity, forming carbon-carbon bonds
LVJ82_01720	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LVJ82_01740	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_01750	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_01755	COG0596	Alpha beta hydrolase
LVJ82_01765	COG2271	Major facilitator Superfamily
LVJ82_01780	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_01800	COG1414	Transcriptional regulator
LVJ82_01805	COG0582	viral genome integration into host DNA
LVJ82_01810	COG2770	Histidine kinase
LVJ82_01810	COG2208	phosphoserine phosphatase activity
LVJ82_01815	COG1366	Belongs to the anti-sigma-factor antagonist family
LVJ82_01865	COG5377	YqaJ viral recombinase family
LVJ82_01895	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LVJ82_01900	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LVJ82_01975	COG3311	Transcriptional regulator
LVJ82_02005	COG4983	Phage plasmid primase, P4 family domain protein
LVJ82_02025	COG5377	YqaJ viral recombinase family
LVJ82_02080	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LVJ82_02085	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LVJ82_02090	COG2951	lytic endotransglycosylase activity
LVJ82_02100	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LVJ82_02115	COG1511	domain protein
LVJ82_02115	COG3264	Mechanosensitive ion channel
LVJ82_02120	COG0494	nUDIX hydrolase
LVJ82_02125	COG3568	Endonuclease Exonuclease Phosphatase
LVJ82_02130	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LVJ82_02135	COG2011	ABC-type metal ion transport system permease component
LVJ82_02145	COG1464	Belongs to the NlpA lipoprotein family
LVJ82_02235	COG2962	Rard protein
LVJ82_02245	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LVJ82_02260	COG1114	Component of the transport system for branched-chain amino acids
LVJ82_02320	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LVJ82_02325	COG1074	ATP-dependent DNA helicase activity
LVJ82_02350	COG1414	Transcriptional regulator
LVJ82_02355	COG0513	Belongs to the DEAD box helicase family
LVJ82_02365	COG0247	lactate metabolic process
LVJ82_02375	COG1139	Iron-sulfur cluster binding protein
LVJ82_02380	COG1620	l-lactate permease
LVJ82_02385	COG1473	amidohydrolase
LVJ82_02445	COG0569	domain protein
LVJ82_02465	COG0644	oxidoreductase
LVJ82_02465	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
LVJ82_02470	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LVJ82_02475	COG1960	acyl-CoA dehydrogenase activity
LVJ82_02490	COG1047	Peptidyl-prolyl cis-trans
LVJ82_02495	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LVJ82_02505	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LVJ82_02505	COG4651	solute:proton antiporter activity
LVJ82_02510	COG0730	response to heat
LVJ82_02520	COG2959	enzyme of heme biosynthesis
LVJ82_02545	COG0745	RESPONSE REGULATOR receiver
LVJ82_02550	COG5002	protein histidine kinase activity
LVJ82_02560	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ82_02580	COG0287	Prephenate dehydrogenase
LVJ82_02600	COG3278	Belongs to the heme-copper respiratory oxidase family
LVJ82_02640	COG1619	proteins homologs of microcin C7 resistance protein MccF
LVJ82_02655	COG0805	protein transport
LVJ82_02680	COG0140	phosphoribosyl-ATP diphosphatase activity
LVJ82_02700	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LVJ82_02730	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LVJ82_02785	COG0456	acetyltransferase
LVJ82_02785	COG0454	-acetyltransferase
LVJ82_02800	COG1902	pentaerythritol trinitrate reductase activity
LVJ82_02800	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ82_02815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_02840	COG0129	dihydroxy-acid dehydratase activity
LVJ82_02885	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LVJ82_02890	COG1137	ATPase activity
LVJ82_02895	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LVJ82_02905	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LVJ82_02925	COG0747	negative chemotaxis
LVJ82_02930	COG0601	transmembrane transport
LVJ82_02935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LVJ82_02940	COG0444	Belongs to the ABC transporter superfamily
LVJ82_02945	COG4608	Belongs to the ABC transporter superfamily
LVJ82_02985	COG1295	ribonuclease BN
LVJ82_02990	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
LVJ82_02995	COG0628	permease
LVJ82_03065	COG1522	sequence-specific DNA binding
LVJ82_03075	COG3835	regulator
LVJ82_03080	COG0579	oxidoreductase
LVJ82_03090	COG1113	amino acid transport
LVJ82_03105	COG3328	transposase activity
LVJ82_03130	COG0268	Binds directly to 16S ribosomal RNA
LVJ82_03135	COG1652	LysM domain
LVJ82_03155	COG2271	Major facilitator Superfamily
LVJ82_03170	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ82_03180	COG0583	DNA-binding transcription factor activity
LVJ82_03195	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LVJ82_03240	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LVJ82_03255	COG0583	DNA-binding transcription factor activity
LVJ82_03270	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ82_03275	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ82_03335	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_03340	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ82_03350	COG2091	lysine biosynthetic process via aminoadipic acid
LVJ82_03355	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LVJ82_03380	COG0626	cystathionine gamma-synthase activity
LVJ82_03410	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LVJ82_03415	COG0583	DNA-binding transcription factor activity
LVJ82_03425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LVJ82_03490	COG1757	Na H antiporter
LVJ82_03500	COG2175	clavaminate synthase activity
LVJ82_03505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ82_03510	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LVJ82_03515	COG4521	taurine ABC transporter
LVJ82_03530	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LVJ82_03540	COG0738	Major facilitator superfamily
LVJ82_03550	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_03560	COG2271	Major facilitator Superfamily
LVJ82_03565	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ82_03605	COG3311	Transcriptional regulator
LVJ82_03635	COG0583	DNA-binding transcription factor activity
LVJ82_03640	COG2271	Major facilitator Superfamily
LVJ82_03660	COG5377	YqaJ viral recombinase family
LVJ82_03710	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ82_03725	COG3586	endonuclease activity
LVJ82_03730	COG3586	endonuclease activity
LVJ82_03735	COG0582	viral genome integration into host DNA
LVJ82_03745	COG3842	ATPase activity
LVJ82_03750	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ82_03755	COG1177	transmembrane transport
LVJ82_03765	COG1252	NADH dehydrogenase
LVJ82_03785	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LVJ82_03790	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LVJ82_03800	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_03835	COG1250	3-hydroxyacyl-CoA dehydrogenase
LVJ82_03840	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LVJ82_03850	COG2271	Major facilitator Superfamily
LVJ82_03855	COG0154	amidase activity
LVJ82_03860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LVJ82_03865	COG2207	Transcriptional regulator
LVJ82_03870	COG2807	transmembrane transport
LVJ82_03875	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LVJ82_03880	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LVJ82_03900	COG2239	Acts as a magnesium transporter
LVJ82_03910	COG2165	general secretion pathway protein
LVJ82_03930	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LVJ82_03935	COG0248	Ppx GppA phosphatase
LVJ82_03940	COG0598	Magnesium transport protein CorA
LVJ82_03945	COG1607	acyl-coa hydrolase
LVJ82_03950	COG0307	riboflavin synthase, alpha
LVJ82_03980	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LVJ82_04000	COG0285	dihydrofolate synthase activity
LVJ82_04015	COG0488	(ABC) transporter
LVJ82_04020	COG0791	NLP P60 protein
LVJ82_04035	COG0583	DNA-binding transcription factor activity
LVJ82_04100	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_04125	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LVJ82_04140	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LVJ82_04155	COG0802	atpase or kinase
LVJ82_04160	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LVJ82_04165	COG1546	Belongs to the CinA family
LVJ82_04165	COG1058	Belongs to the CinA family
LVJ82_04175	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ82_04185	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LVJ82_04215	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LVJ82_04220	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LVJ82_04230	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LVJ82_04235	COG1845	cytochrome c oxidase, subunit III
LVJ82_04240	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LVJ82_04245	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LVJ82_04250	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LVJ82_04260	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ82_04265	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ82_04290	COG0546	phosphoglycolate phosphatase activity
LVJ82_04305	COG0069	glutamate synthase activity
LVJ82_04310	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LVJ82_04320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ82_04325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ82_04355	COG2271	Major facilitator Superfamily
LVJ82_04360	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LVJ82_04375	COG0277	FAD linked oxidase domain protein
LVJ82_04380	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LVJ82_04400	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_04445	COG5377	YqaJ viral recombinase family
LVJ82_04465	COG3620	sequence-specific DNA binding
LVJ82_04490	COG0582	viral genome integration into host DNA
LVJ82_04495	COG4695	Portal protein
LVJ82_04640	COG2932	Transcriptional regulator
LVJ82_04740	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ82_04765	COG0586	Pfam SNARE associated Golgi protein
LVJ82_04780	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LVJ82_04790	COG1534	Rna-binding protein
LVJ82_04810	COG2814	Major facilitator Superfamily
LVJ82_04815	COG0739	heme binding
LVJ82_04815	COG0741	lytic transglycosylase activity
LVJ82_04815	COG1196	nuclear chromosome segregation
LVJ82_04840	COG2234	aminopeptidase activity
LVJ82_04870	COG2814	Major facilitator Superfamily
LVJ82_04890	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LVJ82_04920	COG2261	transglycosylase associated protein
LVJ82_04930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_04940	COG0312	modulator of DNA gyrase
LVJ82_04955	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LVJ82_04960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LVJ82_04965	COG0004	ammonium transporteR
LVJ82_04970	COG0347	Belongs to the P(II) protein family
LVJ82_04985	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LVJ82_04990	COG1335	isochorismatase
LVJ82_05005	COG2154	pterin-4-alpha-carbinolamine dehydratase
LVJ82_05015	COG3186	Phenylalanine-4-hydroxylase
LVJ82_05070	COG1238	metal cluster binding
LVJ82_05080	COG0300	oxidoreductase activity
LVJ82_05085	COG0424	maF-like protein
LVJ82_05120	COG1187	pseudouridine synthase activity
LVJ82_05130	COG1741	Belongs to the pirin family
LVJ82_05140	COG0791	NLP P60 protein
LVJ82_05165	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LVJ82_05170	COG0583	DNA-binding transcription factor activity
LVJ82_05175	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ82_05190	COG1530	ribonuclease E activity
LVJ82_05220	COG1448	Aminotransferase
LVJ82_05230	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ82_05245	COG4206	TonB-dependent receptor
LVJ82_05250	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ82_05260	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LVJ82_05270	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LVJ82_05320	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LVJ82_05330	COG0045	succinate-CoA ligase (ADP-forming) activity
LVJ82_05330	COG1042	CoA-binding domain protein
LVJ82_05330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LVJ82_05365	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LVJ82_05365	COG0512	Glutamine amidotransferase of anthranilate synthase
LVJ82_05375	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LVJ82_05380	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LVJ82_05400	COG1024	Enoyl-CoA hydratase
LVJ82_05405	COG2814	Major facilitator Superfamily
LVJ82_05440	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LVJ82_05445	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ82_05470	COG2318	DinB family
LVJ82_05480	COG0697	spore germination
LVJ82_05515	COG2814	Major facilitator Superfamily
LVJ82_05525	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LVJ82_05555	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LVJ82_05575	COG0592	DNA-directed DNA polymerase activity
LVJ82_05585	COG2031	fatty acid transporter
LVJ82_05590	COG0420	3'-5' exonuclease activity
LVJ82_05595	COG0419	ATPase involved in DNA repair
LVJ82_05610	COG2608	mercury ion transmembrane transporter activity
LVJ82_05630	COG0523	cobalamin synthesis protein
LVJ82_05635	COG0735	belongs to the Fur family
LVJ82_05645	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LVJ82_05695	COG3698	Phosphodiester glycosidase
LVJ82_05710	COG0196	riboflavin kinase activity
LVJ82_05715	COG0765	amino acid transport
LVJ82_05740	COG0488	(ABC) transporter
LVJ82_05760	COG2176	DNA-directed DNA polymerase activity
LVJ82_05770	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LVJ82_05785	COG2326	polyphosphate kinase activity
LVJ82_05790	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LVJ82_05800	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ82_05800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ82_05805	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LVJ82_05835	COG1278	Cold shock
LVJ82_05850	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LVJ82_05870	COG1683	Conserved Protein
LVJ82_05880	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LVJ82_05905	COG0756	dUTP diphosphatase activity
LVJ82_05915	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ82_05920	COG2814	Major facilitator Superfamily
LVJ82_05945	COG2910	NAD(P)H-binding
LVJ82_05950	COG1959	2 iron, 2 sulfur cluster binding
LVJ82_06005	COG3813	Protein conserved in bacteria
LVJ82_06025	COG2814	Major facilitator Superfamily
LVJ82_06030	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ82_06035	COG0183	Belongs to the thiolase family
LVJ82_06040	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LVJ82_06045	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LVJ82_06050	COG3135	benzoate transporter
LVJ82_06055	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_06060	COG0543	2 iron, 2 sulfur cluster binding
LVJ82_06060	COG0633	Ferredoxin
LVJ82_06065	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LVJ82_06070	COG4638	Rieske (2fe-2S)
LVJ82_06080	COG4829	muconolactone delta-isomerase
LVJ82_06085	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ82_06090	COG0583	DNA-binding transcription factor activity
LVJ82_06120	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LVJ82_06135	COG0590	tRNA wobble adenosine to inosine editing
LVJ82_06160	COG3411	Ferredoxin
LVJ82_06210	COG0745	RESPONSE REGULATOR receiver
LVJ82_06215	COG2205	protein histidine kinase activity
LVJ82_06220	COG4452	Inner membrane protein CreD
LVJ82_06235	COG0121	glutamine amidotransferase
LVJ82_06245	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LVJ82_06255	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ82_06255	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ82_06340	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ82_06350	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LVJ82_06370	COG1968	undecaprenyl-diphosphatase activity
LVJ82_06375	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ82_06385	COG0606	chelatase, subunit chli
LVJ82_06400	COG0494	nUDIX hydrolase
LVJ82_06425	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LVJ82_06430	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LVJ82_06435	COG0583	DNA-binding transcription factor activity
LVJ82_06465	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_06470	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LVJ82_06495	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LVJ82_06500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LVJ82_06500	COG0519	Catalyzes the synthesis of GMP from XMP
LVJ82_06505	COG0183	Belongs to the thiolase family
LVJ82_06525	COG1309	transcriptional regulator
LVJ82_06535	COG1063	alcohol dehydrogenase
LVJ82_06550	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LVJ82_06600	COG0589	response to stress
LVJ82_06625	COG2056	Na+-H+ antiporter family
LVJ82_06635	COG2707	UPF0756 membrane protein
LVJ82_06645	COG0789	Transcriptional regulator
LVJ82_06670	COG0494	nUDIX hydrolase
LVJ82_06695	COG1733	regulation of RNA biosynthetic process
LVJ82_06760	COG0528	UMP kinase activity
LVJ82_06765	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LVJ82_06780	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LVJ82_06810	COG0564	pseudouridine synthase activity
LVJ82_06835	COG2095	MarC family integral membrane protein
LVJ82_06840	COG0339	signal peptide processing
LVJ82_06850	COG1959	2 iron, 2 sulfur cluster binding
LVJ82_06855	COG1017	nitric oxide dioxygenase activity
LVJ82_06855	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LVJ82_06870	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LVJ82_06880	COG0477	Major facilitator Superfamily
LVJ82_06885	COG0346	lactoylglutathione lyase activity
LVJ82_06895	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ82_06910	COG2011	ABC-type metal ion transport system permease component
LVJ82_06915	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LVJ82_06925	COG1464	Belongs to the NlpA lipoprotein family
LVJ82_06945	COG0583	DNA-binding transcription factor activity
LVJ82_06950	COG1380	Effector of murein hydrolase LrgA
LVJ82_06960	COG4650	regulator
LVJ82_06975	COG1690	Belongs to the RtcB family
LVJ82_06985	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LVJ82_06990	COG2249	NAD(P)H dehydrogenase (quinone) activity
LVJ82_07020	COG1530	ribonuclease E activity
LVJ82_07030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LVJ82_07035	COG0616	signal peptide processing
LVJ82_07035	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LVJ82_07040	COG1380	Effector of murein hydrolase LrgA
LVJ82_07045	COG1346	cytolysis
LVJ82_07060	COG1214	PFAM Peptidase M22, glycoprotease
LVJ82_07075	COG2969	positive regulation of protein catabolic process
LVJ82_07080	COG0625	glutathione transferase activity
LVJ82_07090	COG2857	Cytochrome c1
LVJ82_07095	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LVJ82_07100	COG0723	plastoquinol--plastocyanin reductase activity
LVJ82_07145	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LVJ82_07160	COG3766	membrane
LVJ82_07165	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LVJ82_07220	COG3234	Protein of unknown function (DUF1175)
LVJ82_07225	COG2373	Large extracellular alpha-helical protein
LVJ82_07230	COG5445	Predicted secreted protein (DUF2300)
LVJ82_07235	COG4676	Protein conserved in bacteria
LVJ82_07270	COG2076	Multidrug Resistance protein
LVJ82_07275	COG0477	Major facilitator Superfamily
LVJ82_07285	COG0697	spore germination
LVJ82_07290	COG1522	sequence-specific DNA binding
LVJ82_07360	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LVJ82_07365	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LVJ82_07385	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LVJ82_07405	COG0700	Nucleoside recognition
LVJ82_07410	COG1285	pathogenesis
LVJ82_07415	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LVJ82_07420	COG1113	amino acid transport
LVJ82_07425	COG1126	abc transporter atp-binding protein
LVJ82_07430	COG0765	amino acid transport
LVJ82_07435	COG0765	amino acid transport
LVJ82_07480	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LVJ82_07490	COG0201	protein transport
LVJ82_07495	COG0200	Binds to the 23S rRNA
LVJ82_07555	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LVJ82_07560	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LVJ82_07610	COG0049	tRNA binding
LVJ82_07635	COG0222	ribosome binding
LVJ82_07690	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LVJ82_07695	COG0742	ribosomal rna small subunit methyltransferase
LVJ82_07700	COG2204	response regulator
LVJ82_07705	COG5000	phosphorelay sensor kinase activity
LVJ82_07715	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ82_07715	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ82_07720	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LVJ82_07730	COG3942	CHAP domain
LVJ82_07730	COG1388	LysM domain
LVJ82_07735	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LVJ82_07735	COG0758	DNA mediated transformation
LVJ82_07755	COG1129	ABC transporter
LVJ82_07760	COG1172	Belongs to the binding-protein-dependent transport system permease family
LVJ82_07765	COG1879	ABC-type sugar transport system periplasmic component
LVJ82_07785	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LVJ82_07790	COG0745	RESPONSE REGULATOR receiver
LVJ82_07795	COG5002	protein histidine kinase activity
LVJ82_07800	COG2030	dehydratase
LVJ82_07840	COG0799	negative regulation of ribosome biogenesis
LVJ82_07850	COG0288	reversible hydration of carbon dioxide
LVJ82_07880	COG2201	protein-glutamate methylesterase activity
LVJ82_07905	COG0322	excinuclease ABC activity
LVJ82_07920	COG0739	heme binding
LVJ82_07930	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LVJ82_07970	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LVJ82_07990	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LVJ82_07990	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LVJ82_08005	COG0412	Dienelactone hydrolase
LVJ82_08065	COG2814	Major facilitator Superfamily
LVJ82_08080	COG4682	membrane
LVJ82_08085	COG0509	glycine decarboxylation via glycine cleavage system
LVJ82_08105	COG2832	Protein of unknown function (DUF454)
LVJ82_08110	COG0788	formyltetrahydrofolate deformylase activity
LVJ82_08125	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LVJ82_08140	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LVJ82_08185	COG1956	GAF domain-containing protein
LVJ82_08195	COG3128	pkhd-type hydroxylase
LVJ82_08200	COG4774	siderophore transport
LVJ82_08205	COG4942	peptidase
LVJ82_08215	COG1247	-acetyltransferase
LVJ82_08265	COG0850	regulation of cytokinetic process
LVJ82_08270	COG1519	Transferase
LVJ82_08275	COG2911	Protein conserved in bacteria
LVJ82_08290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LVJ82_08295	COG0489	protein tyrosine kinase activity
LVJ82_08300	COG4681	YaeQ
LVJ82_08310	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LVJ82_08325	COG1040	competence protein
LVJ82_08340	COG2226	methyltransferase
LVJ82_08345	COG1752	Esterase of the alpha-beta hydrolase superfamily
LVJ82_08360	COG0625	glutathione transferase activity
LVJ82_08370	COG1166	arginine decarboxylase activity
LVJ82_08395	COG1858	cytochrome C peroxidase
LVJ82_08400	COG4771	TonB-dependent receptor
LVJ82_08415	COG1199	ATP-dependent helicase activity
LVJ82_08455	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LVJ82_08465	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LVJ82_08495	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LVJ82_08510	COG1981	membrane
LVJ82_08545	COG1994	Peptidase M50
LVJ82_08550	COG0009	L-threonylcarbamoyladenylate synthase
LVJ82_08560	COG0613	PHP domain protein
LVJ82_08580	COG1742	UPF0060 membrane protein
LVJ82_08585	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LVJ82_08645	COG3237	CsbD-like
LVJ82_08650	COG4221	oxidoreductase activity
LVJ82_08655	COG0583	DNA-binding transcription factor activity
LVJ82_08660	COG2259	Doxx family
LVJ82_08665	COG1132	(ABC) transporter
LVJ82_08705	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LVJ82_08710	COG0436	Aminotransferase
LVJ82_08715	COG2388	GCN5-related N-acetyl-transferase
LVJ82_08760	COG0546	phosphoglycolate phosphatase activity
LVJ82_08795	COG0656	L-ascorbic acid biosynthetic process
LVJ82_08815	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LVJ82_08835	COG2962	Rard protein
LVJ82_08865	COG0210	DNA helicase
LVJ82_08890	COG2119	membrane
LVJ82_08920	COG1739	Uncharacterized protein family UPF0029
LVJ82_08935	COG2086	electron transfer activity
LVJ82_08940	COG0859	PFAM glycosyl transferase family 9
LVJ82_08955	COG1181	Belongs to the D-alanine--D-alanine ligase family
LVJ82_08960	COG0483	inositol monophosphate 1-phosphatase activity
LVJ82_08965	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LVJ82_08970	COG1272	protein, Hemolysin III
LVJ82_08975	COG0393	Putative heavy-metal-binding
LVJ82_09020	COG2364	Membrane
LVJ82_09030	COG2884	Cell division ATP-binding protein ftsE
LVJ82_09045	COG0612	Peptidase, M16
LVJ82_09075	COG1271	oxidase subunit
LVJ82_09080	COG1294	oxidase, subunit
LVJ82_09105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LVJ82_09160	COG0640	Transcriptional regulator
LVJ82_09175	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ82_09205	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LVJ82_09245	COG1846	Transcriptional regulator
LVJ82_09250	COG0697	spore germination
LVJ82_09255	COG0778	Nitroreductase
LVJ82_09285	COG2885	chlorophyll binding
LVJ82_09295	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LVJ82_09310	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LVJ82_09315	COG1253	flavin adenine dinucleotide binding
LVJ82_09320	COG0745	RESPONSE REGULATOR receiver
LVJ82_09325	COG2205	protein histidine kinase activity
LVJ82_09330	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LVJ82_09335	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LVJ82_09340	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LVJ82_09360	COG1414	Transcriptional regulator
LVJ82_09395	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_09430	COG0142	geranyltranstransferase activity
LVJ82_09440	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LVJ82_09445	COG1215	transferase activity, transferring glycosyl groups
LVJ82_09475	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ82_09475	COG1902	pentaerythritol trinitrate reductase activity
LVJ82_09500	COG4224	UPF0291 protein
LVJ82_09505	COG1733	regulation of RNA biosynthetic process
LVJ82_09510	COG1794	racemase activity, acting on amino acids and derivatives
LVJ82_09515	COG0583	DNA-binding transcription factor activity
LVJ82_09525	COG4607	ABC-type enterochelin transport system periplasmic component
LVJ82_09550	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LVJ82_09555	COG1999	signal sequence binding
LVJ82_09570	COG0842	Transport permease protein
LVJ82_09575	COG1131	(ABC) transporter
LVJ82_09580	COG0492	ferredoxin-NADP+ reductase activity
LVJ82_09585	COG2252	PERMEase
LVJ82_09625	COG1115	amino acid carrier protein
LVJ82_09630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ82_09635	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_09650	COG1522	sequence-specific DNA binding
LVJ82_09665	COG0824	Thioesterase
LVJ82_09690	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ82_09695	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LVJ82_09700	COG1127	ABC transporter
LVJ82_09710	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LVJ82_09780	COG3258	Cytochrome c
LVJ82_09830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_09855	COG0583	DNA-binding transcription factor activity
LVJ82_09860	COG1335	isochorismatase
LVJ82_09880	COG1309	transcriptional regulator
LVJ82_09895	COG2755	lipolytic protein G-D-S-L family
LVJ82_09895	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
LVJ82_09915	COG0438	transferase activity, transferring glycosyl groups
LVJ82_09935	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LVJ82_09955	COG0714	Associated with various cellular activities
LVJ82_09995	COG0861	Integral membrane protein TerC family
LVJ82_10015	COG1960	acyl-CoA dehydrogenase activity
LVJ82_10035	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LVJ82_10040	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_10045	COG1054	Belongs to the UPF0176 family
LVJ82_10050	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ82_10055	COG0306	phosphate transporter
LVJ82_10060	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LVJ82_10065	COG0581	inorganic phosphate transmembrane transporter activity
LVJ82_10075	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LVJ82_10095	COG0582	viral genome integration into host DNA
LVJ82_10145	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LVJ82_10155	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LVJ82_10165	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
LVJ82_10170	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
LVJ82_10175	COG1034	ATP synthesis coupled electron transport
LVJ82_10180	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LVJ82_10230	COG1560	Kdo2-lipid A biosynthetic process
LVJ82_10245	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LVJ82_10250	COG0477	Major facilitator Superfamily
LVJ82_10275	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_10285	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ82_10285	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ82_10315	COG0667	Aldo Keto reductase
LVJ82_10345	COG2159	amidohydrolase
LVJ82_10350	COG2828	Protein conserved in bacteria
LVJ82_10370	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LVJ82_10375	COG1414	Transcriptional regulator
LVJ82_10380	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_10385	COG2814	Major facilitator Superfamily
LVJ82_10390	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LVJ82_10400	COG1053	succinate dehydrogenase
LVJ82_10415	COG1053	succinate dehydrogenase
LVJ82_10425	COG2814	Major facilitator Superfamily
LVJ82_10445	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LVJ82_10455	COG0326	Molecular chaperone. Has ATPase activity
LVJ82_10480	COG1473	amidohydrolase
LVJ82_10500	COG1333	cytochrome c biogenesis protein
LVJ82_10505	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LVJ82_10510	COG1253	flavin adenine dinucleotide binding
LVJ82_10525	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
LVJ82_10525	COG2755	lipolytic protein G-D-S-L family
LVJ82_10545	COG1192	Involved in chromosome partitioning
LVJ82_10560	COG0356	it plays a direct role in the translocation of protons across the membrane
LVJ82_10585	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LVJ82_10595	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LVJ82_10600	COG2900	Belongs to the SlyX family
LVJ82_10605	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LVJ82_10615	COG1113	amino acid transport
LVJ82_10625	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LVJ82_10625	COG1648	precorrin-2 dehydrogenase activity
LVJ82_10655	COG2895	sulfate adenylyltransferase (ATP) activity
LVJ82_10660	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LVJ82_10670	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LVJ82_10710	COG2076	Multidrug Resistance protein
LVJ82_10715	COG2076	Multidrug Resistance protein
LVJ82_10720	COG0583	DNA-binding transcription factor activity
LVJ82_10750	COG3384	dioxygenase
LVJ82_10760	COG0583	DNA-binding transcription factor activity
LVJ82_10770	COG4106	trans-aconitate 2-methyltransferase activity
LVJ82_10775	COG0156	8-amino-7-oxononanoate synthase activity
LVJ82_10785	COG2226	methyltransferase
LVJ82_10785	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ82_10785	COG0596	Alpha beta hydrolase
LVJ82_10860	COG3561	AntA/AntB antirepressor
LVJ82_10875	COG0582	viral genome integration into host DNA
LVJ82_10885	COG2885	chlorophyll binding
LVJ82_10910	COG3545	Serine hydrolase
LVJ82_10920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ82_10940	COG2860	membrane
LVJ82_10945	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LVJ82_10955	COG4771	TonB-dependent receptor
LVJ82_10960	COG3158	transport of potassium into the cell
LVJ82_11025	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LVJ82_11055	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LVJ82_11055	COG0678	peroxiredoxin activity
LVJ82_11120	COG2755	lipolytic protein G-D-S-L family
LVJ82_11140	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LVJ82_11155	COG1194	a g-specific adenine glycosylase
LVJ82_11170	COG0039	L-malate dehydrogenase activity
LVJ82_11175	COG2188	Transcriptional regulator
LVJ82_11195	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LVJ82_11200	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LVJ82_11210	COG0567	Dehydrogenase, E1 component
LVJ82_11215	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ82_11225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ82_11235	COG0045	succinate-CoA ligase (ADP-forming) activity
LVJ82_11245	COG4575	ribosome binding
LVJ82_11260	COG2217	Heavy metal translocating P-type atpase
LVJ82_11265	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_11270	COG1596	polysaccharide export
LVJ82_11310	COG0708	Exodeoxyribonuclease III
LVJ82_11315	COG0308	aminopeptidase N
LVJ82_11320	COG0625	glutathione transferase activity
LVJ82_11325	COG0450	alkyl hydroperoxide reductase
LVJ82_11335	COG4589	Belongs to the CDS family
LVJ82_11350	COG0671	phosphoesterase, PA-phosphatase related
LVJ82_11350	COG2453	phosphatase
LVJ82_11355	COG2267	carboxylic ester hydrolase activity
LVJ82_11360	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ82_11380	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LVJ82_11390	COG0183	Belongs to the thiolase family
LVJ82_11410	COG0372	Belongs to the citrate synthase family
LVJ82_11415	COG2079	MmgE PrpD family protein
LVJ82_11420	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ82_11440	COG2001	Belongs to the MraZ family
LVJ82_11465	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LVJ82_11500	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LVJ82_11515	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ82_11515	COG1902	pentaerythritol trinitrate reductase activity
LVJ82_11530	COG1555	photosystem II stabilization
LVJ82_11530	COG1596	polysaccharide export
LVJ82_11560	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LVJ82_11565	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LVJ82_11580	COG0024	Methionine aminopeptidase
LVJ82_11590	COG0429	hydrolase of the alpha beta-hydrolase fold
LVJ82_11600	COG0312	modulator of DNA gyrase
LVJ82_11605	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LVJ82_11610	COG1505	serine-type exopeptidase activity
LVJ82_11630	COG1605	Chorismate mutase
LVJ82_11630	COG0287	Prephenate dehydrogenase
LVJ82_11640	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LVJ82_11655	COG1122	ATPase activity
LVJ82_11685	COG2354	Protein conserved in bacteria
LVJ82_11705	COG1702	phosphate starvation-inducible protein PhoH
LVJ82_11735	COG0326	Molecular chaperone. Has ATPase activity
LVJ82_11750	COG0321	lipoyl(octanoyl) transferase activity
LVJ82_11750	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LVJ82_11755	COG0084	hydrolase, TatD family'
LVJ82_11775	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LVJ82_11780	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LVJ82_11790	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LVJ82_11795	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LVJ82_11800	COG1045	serine acetyltransferase
LVJ82_11810	COG0583	DNA-binding transcription factor activity
LVJ82_11825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LVJ82_11840	COG0154	amidase activity
LVJ82_11850	COG0477	Major facilitator Superfamily
LVJ82_11860	COG0346	lactoylglutathione lyase activity
LVJ82_11880	COG4569	acetaldehyde dehydrogenase (acetylating) activity
LVJ82_11885	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LVJ82_11910	COG0583	DNA-binding transcription factor activity
LVJ82_11925	COG3313	Fe-S protein
LVJ82_11930	COG0697	spore germination
LVJ82_11950	COG0412	Dienelactone hydrolase
LVJ82_12000	COG1073	alpha beta
LVJ82_12005	COG2814	Major facilitator Superfamily
LVJ82_12015	COG0789	Transcriptional regulator
LVJ82_12020	COG2814	Major facilitator Superfamily
LVJ82_12035	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LVJ82_12040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ82_12055	COG1629	transport
LVJ82_12055	COG4771	TonB-dependent receptor
LVJ82_12085	COG1686	Belongs to the peptidase S11 family
LVJ82_12095	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LVJ82_12105	COG2839	Protein conserved in bacteria
LVJ82_12110	COG0431	NADPH-dependent FMN reductase
LVJ82_12115	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ82_12125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ82_12130	COG1116	anion transmembrane transporter activity
LVJ82_12160	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LVJ82_12165	COG0105	UTP biosynthetic process
LVJ82_12215	COG2070	2-Nitropropane dioxygenase
LVJ82_12230	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LVJ82_12245	COG2096	Adenosyltransferase
LVJ82_12255	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LVJ82_12260	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LVJ82_12280	COG1611	Belongs to the LOG family
LVJ82_12350	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LVJ82_12380	COG0513	Belongs to the DEAD box helicase family
LVJ82_12420	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LVJ82_12425	COG2207	Transcriptional regulator
LVJ82_12430	COG0583	DNA-binding transcription factor activity
LVJ82_12435	COG2814	Major facilitator Superfamily
LVJ82_12450	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_12460	COG0657	acetylesterase activity
LVJ82_12475	COG0583	DNA-binding transcription factor activity
LVJ82_12490	COG1671	Belongs to the UPF0178 family
LVJ82_12500	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ82_12505	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LVJ82_12515	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LVJ82_12520	COG0631	protein serine/threonine phosphatase activity
LVJ82_12570	COG5377	YqaJ viral recombinase family
LVJ82_12640	COG0582	viral genome integration into host DNA
LVJ82_12650	COG0142	geranyltranstransferase activity
LVJ82_12655	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LVJ82_12685	COG0254	rRNA binding
LVJ82_12695	COG0402	S-adenosylhomocysteine deaminase activity
LVJ82_12705	COG2350	Protein conserved in bacteria
LVJ82_12730	COG0501	Belongs to the peptidase M48B family
LVJ82_12735	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LVJ82_12740	COG0166	Belongs to the GPI family
LVJ82_12765	COG0135	phosphoribosylanthranilate isomerase activity
LVJ82_12780	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LVJ82_12800	COG3180	Ammonia monooxygenase
LVJ82_12805	COG2133	pyrroloquinoline quinone binding
LVJ82_12825	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
LVJ82_12840	COG1160	GTP binding
LVJ82_12855	COG1234	tRNA 3'-trailer cleavage
LVJ82_12870	COG0351	phosphomethylpyrimidine kinase
LVJ82_12875	COG0352	thiamine-phosphate diphosphorylase activity
LVJ82_12890	COG0697	spore germination
LVJ82_12895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LVJ82_12905	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LVJ82_12910	COG1183	phosphatidylcholine synthase activity
LVJ82_12925	COG0484	heat shock protein binding
LVJ82_12930	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ82_12940	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LVJ82_12950	COG1305	Transglutaminase-like
LVJ82_12965	COG2027	D-alanyl-D-alanine carboxypeptidase
LVJ82_12985	COG4106	trans-aconitate 2-methyltransferase activity
LVJ82_12990	COG3541	Predicted nucleotidyltransferase
LVJ82_13015	COG0542	response to heat
LVJ82_13025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LVJ82_13030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ82_13035	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LVJ82_13040	COG1765	OsmC-like protein
LVJ82_13055	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LVJ82_13065	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LVJ82_13070	COG2194	sulfuric ester hydrolase activity
LVJ82_13075	COG0745	RESPONSE REGULATOR receiver
LVJ82_13080	COG0642	Histidine kinase
LVJ82_13085	COG3738	Protein conserved in bacteria
LVJ82_13100	COG0534	Mate efflux family protein
LVJ82_13130	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LVJ82_13140	COG0544	peptidyl-prolyl cis-trans isomerase activity
LVJ82_13175	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LVJ82_13200	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LVJ82_13250	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
LVJ82_13255	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_13265	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LVJ82_13285	COG1902	pentaerythritol trinitrate reductase activity
LVJ82_13290	COG0187	DNA topoisomerase II activity
LVJ82_13330	COG2814	Major facilitator Superfamily
LVJ82_13365	COG0840	transmembrane signaling receptor activity
LVJ82_13380	COG0633	Ferredoxin
LVJ82_13405	COG0822	iron-sulfur transferase activity
LVJ82_13420	COG0560	Phosphoserine phosphatase
LVJ82_13425	COG0386	Belongs to the glutathione peroxidase family
LVJ82_13445	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ82_13465	COG3193	protein, possibly involved in utilization of glycolate and propanediol
LVJ82_13475	COG0247	lactate metabolic process
LVJ82_13480	COG0277	FAD linked oxidase domain protein
LVJ82_13485	COG0277	FAD linked oxidase domain protein
LVJ82_13490	COG0657	acetylesterase activity
LVJ82_13495	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LVJ82_13530	COG2365	Tyrosine phosphatase family
LVJ82_13535	COG0477	Major facilitator Superfamily
LVJ82_13540	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LVJ82_13565	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_13585	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LVJ82_13595	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LVJ82_13605	COG4122	O-methyltransferase activity
LVJ82_13615	COG0617	tRNA 3'-terminal CCA addition
LVJ82_13620	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LVJ82_13625	COG1428	Deoxynucleoside kinase
LVJ82_13655	COG0012	GTP binding
LVJ82_13685	COG2353	YceI-like domain
LVJ82_13695	COG0628	permease
LVJ82_13700	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LVJ82_13735	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LVJ82_13745	COG3201	nicotinamide mononucleotide transporter
LVJ82_13755	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LVJ82_13765	COG0500	methyltransferase
LVJ82_13775	COG1217	gtp-binding protein TYPA
LVJ82_13780	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ82_13790	COG1047	Peptidyl-prolyl cis-trans
LVJ82_13795	COG1522	sequence-specific DNA binding
LVJ82_13810	COG1113	amino acid transport
LVJ82_13850	COG2814	Major facilitator Superfamily
LVJ82_13855	COG0252	asparaginase activity
LVJ82_13870	COG0488	(ABC) transporter
LVJ82_13875	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LVJ82_13890	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LVJ82_13915	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LVJ82_13920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LVJ82_13960	COG0431	NADPH-dependent FMN reductase
LVJ82_13965	COG0798	PFAM Bile acid sodium symporter
LVJ82_13995	COG0789	Transcriptional regulator
LVJ82_14010	COG0586	Pfam SNARE associated Golgi protein
LVJ82_14015	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ82_14020	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ82_14055	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LVJ82_14100	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LVJ82_14115	COG1309	transcriptional regulator
LVJ82_14120	COG0433	COG0433 Predicted ATPase
LVJ82_14125	COG0280	phosphate acetyltransferase
LVJ82_14125	COG0857	belongs to the CobB CobQ family
LVJ82_14140	COG0583	DNA-binding transcription factor activity
LVJ82_14155	COG0642	Histidine kinase
LVJ82_14175	COG0672	)-iron permease
LVJ82_14180	COG1024	Enoyl-CoA hydratase
LVJ82_14215	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LVJ82_14235	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LVJ82_14275	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ82_14280	COG1393	Belongs to the ArsC family
LVJ82_14305	COG0512	Glutamine amidotransferase of anthranilate synthase
LVJ82_14330	COG1760	l-serine dehydratase
LVJ82_14335	COG1388	LysM domain
LVJ82_14335	COG0741	lytic transglycosylase activity
LVJ82_14380	COG1496	oxidoreductase activity
LVJ82_14395	COG4208	sulfate ABC transporter
LVJ82_14405	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ82_14420	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_14425	COG2233	PERMEase
LVJ82_14435	COG1297	OPT oligopeptide transporter protein
LVJ82_14440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LVJ82_14450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LVJ82_14460	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LVJ82_14470	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
LVJ82_14480	COG0497	DNA recombination
LVJ82_14495	COG1957	nucleoside hydrolase
LVJ82_14505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LVJ82_14510	COG3012	SEC-C Motif Domain Protein
LVJ82_14510	COG3318	Belongs to the UPF0149 family
LVJ82_14530	COG0772	Belongs to the SEDS family
LVJ82_14535	COG0768	penicillin binding
LVJ82_14545	COG1792	Involved in formation and maintenance of cell shape
LVJ82_14550	COG1077	Cell shape determining protein MreB Mrl
LVJ82_14555	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LVJ82_14570	COG0210	DNA helicase
LVJ82_14580	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LVJ82_14595	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LVJ82_14605	COG1304	FMN binding
LVJ82_14640	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LVJ82_14645	COG2949	membrane
LVJ82_14665	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LVJ82_14680	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ82_14685	COG0477	Major facilitator Superfamily
LVJ82_14715	COG0765	amino acid transport
LVJ82_14720	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ82_14730	COG1049	propionate catabolic process, 2-methylcitrate cycle
LVJ82_14780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_14785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LVJ82_14790	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_14810	COG4638	Rieske (2fe-2S)
LVJ82_14815	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LVJ82_14820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LVJ82_14820	COG2169	Transcriptional regulator
LVJ82_14825	COG4774	siderophore transport
LVJ82_14830	COG4615	Cyclic peptide transporter
LVJ82_14835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ82_14840	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ82_14845	COG1120	ATPase activity
LVJ82_14855	COG0347	Belongs to the P(II) protein family
LVJ82_14865	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LVJ82_14875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ82_14880	COG0765	amino acid transport
LVJ82_14890	COG0814	amino acid
LVJ82_14895	COG1414	Transcriptional regulator
LVJ82_14900	COG1454	alcohol dehydrogenase
LVJ82_14920	COG1115	amino acid carrier protein
LVJ82_14935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_14940	COG1177	transmembrane transport
LVJ82_14945	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ82_14950	COG3842	ATPase activity
LVJ82_14955	COG3135	benzoate transporter
LVJ82_14975	COG2733	membrane
LVJ82_14980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LVJ82_14995	COG2814	Major facilitator Superfamily
LVJ82_15015	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ82_15020	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LVJ82_15040	COG0488	(ABC) transporter
LVJ82_15060	COG1115	amino acid carrier protein
LVJ82_15065	COG0431	NADPH-dependent FMN reductase
LVJ82_15095	COG2814	Major facilitator Superfamily
LVJ82_15100	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LVJ82_15105	COG0583	DNA-binding transcription factor activity
LVJ82_15110	COG2814	Major facilitator Superfamily
LVJ82_15130	COG4628	conserved protein (DUF2132)
LVJ82_15145	COG0633	Ferredoxin
LVJ82_15150	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ82_15155	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ82_15160	COG1881	PFAM PEBP family protein
LVJ82_15175	COG4676	Protein conserved in bacteria
LVJ82_15180	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ82_15185	COG2070	2-Nitropropane dioxygenase
LVJ82_15190	COG0251	oxidation-reduction process
LVJ82_15195	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LVJ82_15200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ82_15210	COG1538	Outer membrane efflux protein
LVJ82_15220	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LVJ82_15260	COG0583	DNA-binding transcription factor activity
LVJ82_15270	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LVJ82_15310	COG3118	belongs to the thioredoxin family
LVJ82_15325	COG2267	carboxylic ester hydrolase activity
LVJ82_15340	COG2321	neutral zinc metallopeptidase
LVJ82_15355	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_15360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ82_15365	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_15365	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LVJ82_15385	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LVJ82_15390	COG2967	ApaG domain
LVJ82_15410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LVJ82_15420	COG0531	amino acid
LVJ82_15440	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_15450	COG1982	Orn Lys Arg decarboxylase major
LVJ82_15470	COG3831	ATPase activity
LVJ82_15480	COG0714	Associated with various cellular activities
LVJ82_15490	COG3552	Protein containing von Willebrand factor type A (VWA) domain
LVJ82_15510	COG1011	Hydrolase
LVJ82_15620	COG0582	viral genome integration into host DNA
LVJ82_15640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LVJ82_15655	COG0714	Associated with various cellular activities
LVJ82_15675	COG2878	Part of a membrane complex involved in electron transport
LVJ82_15685	COG1518	maintenance of DNA repeat elements
LVJ82_15690	COG1203	CRISPR-associated helicase, Cas3
LVJ82_15760	COG0387	Pfam Sodium calcium exchanger
LVJ82_15780	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LVJ82_15785	COG2171	N-acyltransferase activity
LVJ82_15810	COG0385	Bile acid
LVJ82_15820	COG0501	Belongs to the peptidase M48B family
LVJ82_15845	COG0028	Belongs to the TPP enzyme family
LVJ82_15850	COG0440	acetolactate synthase activity
LVJ82_15855	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LVJ82_15875	COG1187	pseudouridine synthase activity
LVJ82_15940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ82_15945	COG2866	Carboxypeptidase
LVJ82_15995	COG2854	intermembrane phospholipid transfer
LVJ82_16000	COG0006	proline dipeptidase activity
LVJ82_16025	COG2841	Protein conserved in bacteria
LVJ82_16035	COG1121	(ABC) transporter
LVJ82_16040	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LVJ82_16045	COG0803	Belongs to the bacterial solute-binding protein 9 family
LVJ82_16065	COG0583	DNA-binding transcription factor activity
LVJ82_16110	COG2233	PERMEase
LVJ82_16130	COG1215	transferase activity, transferring glycosyl groups
LVJ82_16135	COG0726	polysaccharide deacetylase
LVJ82_16135	COG1649	PFAM Uncharacterised BCR, COG1649
LVJ82_16155	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LVJ82_16160	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LVJ82_16165	COG3639	organic phosphonate transmembrane transporter activity
LVJ82_16180	COG3626	phosphonate metabolism
LVJ82_16185	COG3627	carbon phosphorus lyase activity
LVJ82_16190	COG4107	phosphonate C-P lyase system protein PhnK
LVJ82_16195	COG4778	phosphonate C-P lyase system protein PhnL
LVJ82_16200	COG3454	Phosphonate metabolism
LVJ82_16210	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LVJ82_16220	COG1960	acyl-CoA dehydrogenase activity
LVJ82_16225	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LVJ82_16245	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ82_16280	COG0826	peptidase U32
LVJ82_16285	COG0833	amino acid
LVJ82_16300	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LVJ82_16305	COG3384	dioxygenase
LVJ82_16325	COG1301	dicarboxylic acid transport
LVJ82_16330	COG4607	ABC-type enterochelin transport system periplasmic component
LVJ82_16335	COG4604	ABC transporter, ATP-binding protein
LVJ82_16340	COG4605	iron ion homeostasis
LVJ82_16345	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ82_16355	COG4772	TonB-dependent receptor
LVJ82_16395	COG1643	Atp-dependent helicase
LVJ82_16400	COG2304	oxidoreductase activity
LVJ82_16410	COG1966	Carbon starvation protein
LVJ82_16425	COG2076	Multidrug Resistance protein
LVJ82_16430	COG0183	Belongs to the thiolase family
LVJ82_16435	COG3243	poly(R)-hydroxyalkanoic acid synthase
LVJ82_16440	COG0494	nUDIX hydrolase
LVJ82_16450	COG1970	mechanosensitive ion channel activity
LVJ82_16460	COG4166	transmembrane transport
LVJ82_16480	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LVJ82_16490	COG0704	Plays a role in the regulation of phosphate uptake
LVJ82_16510	COG0513	Belongs to the DEAD box helicase family
LVJ82_16520	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LVJ82_16545	COG0642	Histidine kinase
LVJ82_16555	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LVJ82_16565	COG0789	Transcriptional regulator
LVJ82_16570	COG4174	ABC transporter (Permease)
LVJ82_16575	COG4239	(ABC) transporter, permease
LVJ82_16585	COG3314	Sporulation integral membrane protein YlbJ
LVJ82_16595	COG0584	glycerophosphoryl diester phosphodiesterase
LVJ82_16600	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LVJ82_16615	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ82_16620	COG0436	Aminotransferase
LVJ82_16625	COG1464	Belongs to the NlpA lipoprotein family
LVJ82_16650	COG0765	amino acid transport
LVJ82_16660	COG0765	amino acid transport
LVJ82_16665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ82_16670	COG1126	abc transporter atp-binding protein
LVJ82_16680	COG2072	flavoprotein involved in K transport
LVJ82_16710	COG3210	domain, Protein
LVJ82_16790	COG0582	viral genome integration into host DNA
LVJ82_17060	COG3646	Phage regulatory protein
LVJ82_17195	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LVJ82_17370	COG3561	AntA/AntB antirepressor
LVJ82_17395	COG0464	growth
LVJ82_17425	COG0582	viral genome integration into host DNA
LVJ82_17445	COG2835	tetraacyldisaccharide 4'-kinase activity
LVJ82_17450	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LVJ82_17470	COG0210	DNA helicase
LVJ82_17475	COG0406	alpha-ribazole phosphatase activity
LVJ82_17485	COG0617	tRNA 3'-terminal CCA addition
LVJ82_17505	COG0410	ABC transporter
LVJ82_17535	COG0492	ferredoxin-NADP+ reductase activity
LVJ82_17540	COG0859	PFAM glycosyl transferase family 9
LVJ82_17560	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LVJ82_17570	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LVJ82_17585	COG0386	Belongs to the glutathione peroxidase family
LVJ82_17655	COG1757	Na H antiporter
LVJ82_17670	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LVJ82_17760	COG3485	protocatechuate 3,4-dioxygenase
LVJ82_17765	COG1454	alcohol dehydrogenase
LVJ82_17770	COG1012	belongs to the aldehyde dehydrogenase family
LVJ82_17785	COG0583	DNA-binding transcription factor activity
LVJ82_17805	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LVJ82_17840	COG3949	Membrane
LVJ82_17850	COG0484	heat shock protein binding
LVJ82_17855	COG1396	sequence-specific DNA binding
LVJ82_17860	COG3135	benzoate transporter
LVJ82_17875	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LVJ82_17880	COG1187	pseudouridine synthase activity
LVJ82_17885	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LVJ82_17890	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LVJ82_17900	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LVJ82_17935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ82_17950	COG3275	phosphorelay sensor kinase activity
LVJ82_17995	COG0708	Exodeoxyribonuclease III
LVJ82_18005	COG1090	epimerase
LVJ82_18030	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LVJ82_18060	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
LVJ82_18070	COG3196	Protein conserved in bacteria
LVJ82_18090	COG1032	radical SAM domain protein
LVJ82_18100	COG0842	Transport permease protein
LVJ82_18105	COG0842	Transport permease protein
LVJ82_18105	COG1129	ABC transporter
LVJ82_18110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ82_18125	COG1408	metallophosphoesterase
LVJ82_18150	COG0538	isocitrate dehydrogenase activity
LVJ82_18160	COG1187	pseudouridine synthase activity
LVJ82_18185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LVJ82_18190	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LVJ82_18195	COG1561	YicC-like family, N-terminal region
LVJ82_18225	COG2986	histidine ammonia-lyase
LVJ82_18240	COG0010	Belongs to the arginase family
LVJ82_18245	COG1690	Belongs to the RtcB family
LVJ82_18250	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LVJ82_18320	COG2833	Protein of unknown function (DUF455)
LVJ82_18330	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LVJ82_18350	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LVJ82_18355	COG1686	Belongs to the peptidase S11 family
LVJ82_18365	COG0753	catalase activity
LVJ82_18395	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LVJ82_18405	COG0800	Aldolase
LVJ82_18415	COG0277	FAD linked oxidase domain protein
LVJ82_18445	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LVJ82_18475	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LVJ82_18480	COG4942	peptidase
LVJ82_18485	COG0793	Belongs to the peptidase S41A family