locus-tag	class	description
ADP71_00120	COG0477	Major facilitator Superfamily
ADP71_00200	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ADP71_00210	COG3766	membrane
ADP71_00270	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ADP71_00400	COG0625	glutathione transferase activity
ADP71_00410	COG2969	positive regulation of protein catabolic process
ADP71_00470	COG1346	cytolysis
ADP71_00490	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ADP71_00490	COG0616	signal peptide processing
ADP71_00500	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ADP71_00510	COG0564	pseudouridine synthase activity
ADP71_00520	COG1530	ribonuclease E activity
ADP71_00600	COG1959	2 iron, 2 sulfur cluster binding
ADP71_00640	COG2095	MarC family integral membrane protein
ADP71_00670	COG0564	pseudouridine synthase activity
ADP71_00740	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ADP71_00750	COG0052	Belongs to the universal ribosomal protein uS2 family
ADP71_00770	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ADP71_00780	COG0528	UMP kinase activity
ADP71_01100	COG0589	response to stress
ADP71_01180	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ADP71_01220	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ADP71_01250	COG1063	alcohol dehydrogenase
ADP71_01290	COG1960	acyl-CoA dehydrogenase activity
ADP71_01310	COG1250	3-hydroxyacyl-CoA dehydrogenase
ADP71_01310	COG1024	Enoyl-CoA hydratase
ADP71_01320	COG0183	Belongs to the thiolase family
ADP71_01330	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ADP71_01470	COG1968	undecaprenyl-diphosphatase activity
ADP71_01520	COG0583	DNA-binding transcription factor activity
ADP71_01540	COG0791	NLP P60 protein
ADP71_01590	COG0285	dihydrofolate synthase activity
ADP71_01700	COG0307	riboflavin synthase, alpha
ADP71_01710	COG1607	acyl-coa hydrolase
ADP71_01720	COG0598	Magnesium transport protein CorA
ADP71_01730	COG0248	Ppx GppA phosphatase
ADP71_01750	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ADP71_01820	COG2239	Acts as a magnesium transporter
ADP71_01850	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ADP71_01860	COG2807	transmembrane transport
ADP71_01870	COG2207	Transcriptional regulator
ADP71_01880	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ADP71_01890	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ADP71_01930	COG1252	NADH dehydrogenase
ADP71_01960	COG0583	DNA-binding transcription factor activity
ADP71_01990	COG1305	Transglutaminase-like
ADP71_02010	COG2308	Evidence 4 Homologs of previously reported genes of
ADP71_02030	COG0583	DNA-binding transcription factor activity
ADP71_02040	COG1335	isochorismatase
ADP71_02060	COG1063	alcohol dehydrogenase
ADP71_02070	COG0402	S-adenosylhomocysteine deaminase activity
ADP71_02120	COG1757	Na H antiporter
ADP71_02190	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ADP71_02300	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ADP71_02340	COG0513	Belongs to the DEAD box helicase family
ADP71_02380	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ADP71_02550	COG0582	viral genome integration into host DNA
ADP71_02640	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ADP71_02680	COG1652	LysM domain
ADP71_02690	COG0268	Binds directly to 16S ribosomal RNA
ADP71_02740	COG0601	transmembrane transport
ADP71_02760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ADP71_02780	COG0444	Belongs to the ABC transporter superfamily
ADP71_02800	COG4608	Belongs to the ABC transporter superfamily
ADP71_02810	COG1464	Belongs to the NlpA lipoprotein family
ADP71_02820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_02920	COG0640	Transcriptional regulator
ADP71_02940	COG1295	ribonuclease BN
ADP71_02960	COG0628	permease
ADP71_03070	COG1902	pentaerythritol trinitrate reductase activity
ADP71_03070	COG0446	pyridine nucleotide-disulphide oxidoreductase
ADP71_03130	COG2304	oxidoreductase activity
ADP71_03240	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ADP71_03280	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ADP71_03290	COG0438	transferase activity, transferring glycosyl groups
ADP71_03450	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ADP71_03460	COG1088	dTDP-glucose 4,6-dehydratase activity
ADP71_03470	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ADP71_03470	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ADP71_03490	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ADP71_03510	COG0121	glutamine amidotransferase
ADP71_03570	COG2205	protein histidine kinase activity
ADP71_03580	COG0745	RESPONSE REGULATOR receiver
ADP71_03640	COG3411	Ferredoxin
ADP71_03680	COG0387	Pfam Sodium calcium exchanger
ADP71_03700	COG0590	tRNA wobble adenosine to inosine editing
ADP71_03760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ADP71_03930	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_03980	COG2814	Major facilitator Superfamily
ADP71_03990	COG0318	PFAM AMP-dependent synthetase and ligase
ADP71_04020	COG0756	dUTP diphosphatase activity
ADP71_04070	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ADP71_04090	COG1683	Conserved Protein
ADP71_04120	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ADP71_04160	COG1278	Cold shock
ADP71_04190	COG0542	response to heat
ADP71_04220	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ADP71_04230	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ADP71_04230	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ADP71_04250	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ADP71_04260	COG2326	polyphosphate kinase activity
ADP71_04290	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ADP71_04310	COG0859	PFAM glycosyl transferase family 9
ADP71_04360	COG0196	riboflavin kinase activity
ADP71_04380	COG0765	amino acid transport
ADP71_04430	COG0488	(ABC) transporter
ADP71_04490	COG1199	ATP-dependent helicase activity
ADP71_04490	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ADP71_04630	COG0142	geranyltranstransferase activity
ADP71_04640	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ADP71_04720	COG0402	S-adenosylhomocysteine deaminase activity
ADP71_04770	COG2350	Protein conserved in bacteria
ADP71_04820	COG0501	Belongs to the peptidase M48B family
ADP71_04830	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ADP71_04840	COG0166	Belongs to the GPI family
ADP71_04870	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ADP71_04890	COG0135	phosphoribosylanthranilate isomerase activity
ADP71_04930	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ADP71_04950	COG2133	pyrroloquinoline quinone binding
ADP71_04970	COG5592	hemerythrin HHE cation binding domain
ADP71_05020	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ADP71_05060	COG1234	tRNA 3'-trailer cleavage
ADP71_05080	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
ADP71_05090	COG0351	phosphomethylpyrimidine kinase
ADP71_05130	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ADP71_05140	COG1183	phosphatidylcholine synthase activity
ADP71_05190	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ADP71_05200	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ADP71_05210	COG2027	D-alanyl-D-alanine carboxypeptidase
ADP71_05280	COG0643	Histidine kinase
ADP71_05280	COG2198	Histidine kinase
ADP71_05330	COG0542	response to heat
ADP71_05350	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ADP71_05380	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ADP71_05390	COG1765	OsmC-like protein
ADP71_05440	COG0534	Mate efflux family protein
ADP71_05480	COG0544	peptidyl-prolyl cis-trans isomerase activity
ADP71_05510	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ADP71_05550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ADP71_05560	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ADP71_05650	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
ADP71_05690	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ADP71_05720	COG1902	pentaerythritol trinitrate reductase activity
ADP71_05770	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ADP71_05870	COG0840	transmembrane signaling receptor activity
ADP71_05900	COG2975	iron-sulfur cluster assembly
ADP71_05910	COG0633	Ferredoxin
ADP71_05950	COG0822	iron-sulfur transferase activity
ADP71_05980	COG0560	Phosphoserine phosphatase
ADP71_06000	COG0386	Belongs to the glutathione peroxidase family
ADP71_06040	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ADP71_06070	COG0784	Response regulator, receiver
ADP71_06070	COG2205	protein histidine kinase activity
ADP71_06100	COG3193	protein, possibly involved in utilization of glycolate and propanediol
ADP71_06120	COG0247	lactate metabolic process
ADP71_06130	COG0277	FAD linked oxidase domain protein
ADP71_06160	COG0277	FAD linked oxidase domain protein
ADP71_06200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ADP71_06360	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ADP71_06370	COG0123	including yeast histone deacetylase and acetoin utilization protein
ADP71_06390	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_06400	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ADP71_06460	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ADP71_06470	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ADP71_06490	COG4122	O-methyltransferase activity
ADP71_06510	COG0617	tRNA 3'-terminal CCA addition
ADP71_06520	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ADP71_06530	COG1428	Deoxynucleoside kinase
ADP71_06590	COG0012	GTP binding
ADP71_06670	COG0628	permease
ADP71_06680	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ADP71_06780	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ADP71_06920	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ADP71_06950	COG1047	Peptidyl-prolyl cis-trans
ADP71_06960	COG1522	sequence-specific DNA binding
ADP71_07000	COG1113	amino acid transport
ADP71_07120	COG1773	rubredoxin
ADP71_07130	COG1116	anion transmembrane transporter activity
ADP71_07140	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ADP71_07160	COG0252	asparaginase activity
ADP71_07190	COG0488	(ABC) transporter
ADP71_07220	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
ADP71_07250	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ADP71_07300	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ADP71_07430	COG0586	Pfam SNARE associated Golgi protein
ADP71_07440	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ADP71_07450	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ADP71_07520	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ADP71_07630	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ADP71_07690	COG1309	transcriptional regulator
ADP71_07700	COG0433	COG0433 Predicted ATPase
ADP71_07740	COG0745	RESPONSE REGULATOR receiver
ADP71_07770	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ADP71_07770	COG0351	phosphomethylpyrimidine kinase
ADP71_07770	COG0352	thiamine-phosphate diphosphorylase activity
ADP71_07790	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ADP71_07900	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ADP71_07920	COG1393	Belongs to the ArsC family
ADP71_07960	COG0512	Glutamine amidotransferase of anthranilate synthase
ADP71_08000	COG1760	l-serine dehydratase
ADP71_08010	COG1388	LysM domain
ADP71_08010	COG0741	lytic transglycosylase activity
ADP71_08110	COG4208	sulfate ABC transporter
ADP71_08170	COG1012	belongs to the aldehyde dehydrogenase family
ADP71_08190	COG2233	PERMEase
ADP71_08230	COG1297	OPT oligopeptide transporter protein
ADP71_08250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ADP71_08280	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ADP71_08300	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ADP71_08320	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ADP71_08360	COG0497	DNA recombination
ADP71_08400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ADP71_08410	COG3318	Belongs to the UPF0149 family
ADP71_08410	COG3012	SEC-C Motif Domain Protein
ADP71_08440	COG0772	Belongs to the SEDS family
ADP71_08450	COG0768	penicillin binding
ADP71_08470	COG1792	Involved in formation and maintenance of cell shape
ADP71_08480	COG1077	Cell shape determining protein MreB Mrl
ADP71_08490	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ADP71_08560	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
ADP71_08610	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ADP71_08650	COG0129	dihydroxy-acid dehydratase activity
ADP71_08690	COG4783	chaperone-mediated protein folding
ADP71_08720	COG0537	adenosine 5'-monophosphoramidase activity
ADP71_08730	COG1304	FMN binding
ADP71_08750	COG1620	l-lactate permease
ADP71_08760	COG1139	Iron-sulfur cluster binding protein
ADP71_08780	COG0247	lactate metabolic process
ADP71_08790	COG2186	Transcriptional regulator
ADP71_08810	COG0513	Belongs to the DEAD box helicase family
ADP71_08840	COG1414	Transcriptional regulator
ADP71_08880	COG1074	ATP-dependent DNA helicase activity
ADP71_08920	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ADP71_09030	COG1114	Component of the transport system for branched-chain amino acids
ADP71_09070	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ADP71_09090	COG2962	Rard protein
ADP71_09120	COG0330	HflC and HflK could
ADP71_09140	COG1464	Belongs to the NlpA lipoprotein family
ADP71_09160	COG2011	ABC-type metal ion transport system permease component
ADP71_09170	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ADP71_09180	COG3568	Endonuclease Exonuclease Phosphatase
ADP71_09190	COG0494	nUDIX hydrolase
ADP71_09200	COG3264	Mechanosensitive ion channel
ADP71_09200	COG1511	domain protein
ADP71_09230	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ADP71_09250	COG2951	lytic endotransglycosylase activity
ADP71_09270	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ADP71_09290	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ADP71_09310	COG3040	lipid binding
ADP71_09330	COG0251	oxidation-reduction process
ADP71_09390	COG1538	Outer membrane efflux protein
ADP71_09400	COG3012	SEC-C Motif Domain Protein
ADP71_09440	COG1115	amino acid carrier protein
ADP71_09460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_09490	COG1177	transmembrane transport
ADP71_09500	COG1176	ABC-type spermidine putrescine transport system, permease component I
ADP71_09510	COG3842	ATPase activity
ADP71_09520	COG3135	benzoate transporter
ADP71_09580	COG2733	membrane
ADP71_09650	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ADP71_09660	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ADP71_09700	COG0488	(ABC) transporter
ADP71_09740	COG0010	Belongs to the arginase family
ADP71_09760	COG0084	hydrolase, TatD family'
ADP71_09820	COG0436	Aminotransferase
ADP71_09850	COG0583	DNA-binding transcription factor activity
ADP71_09870	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ADP71_09880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ADP71_09940	COG2824	Alkylphosphonate utilization operon protein PhnA
ADP71_09950	COG0318	PFAM AMP-dependent synthetase and ligase
ADP71_09990	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ADP71_10000	COG0427	acetyl-CoA hydrolase
ADP71_10010	COG0859	PFAM glycosyl transferase family 9
ADP71_10060	COG1132	(ABC) transporter
ADP71_10100	COG2431	L-lysine efflux transmembrane transporter activity
ADP71_10130	COG1349	DNA-binding transcription factor activity
ADP71_10140	COG1132	(ABC) transporter
ADP71_10200	COG0477	Major facilitator Superfamily
ADP71_10210	COG0506	proline dehydrogenase activity
ADP71_10210	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ADP71_10210	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ADP71_10280	COG2267	carboxylic ester hydrolase activity
ADP71_10310	COG2321	neutral zinc metallopeptidase
ADP71_10340	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_10370	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ADP71_10370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_10450	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ADP71_10460	COG2967	ApaG domain
ADP71_10480	COG1982	Orn Lys Arg decarboxylase major
ADP71_10630	COG0714	Associated with various cellular activities
ADP71_10740	COG2878	Part of a membrane complex involved in electron transport
ADP71_10840	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ADP71_10850	COG2171	N-acyltransferase activity
ADP71_10920	COG0028	Belongs to the TPP enzyme family
ADP71_10930	COG0440	acetolactate synthase activity
ADP71_10940	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ADP71_11020	COG1187	pseudouridine synthase activity
ADP71_11200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ADP71_11210	COG2866	Carboxypeptidase
ADP71_11320	COG0006	proline dipeptidase activity
ADP71_11380	COG2841	Protein conserved in bacteria
ADP71_11410	COG1121	(ABC) transporter
ADP71_11430	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ADP71_11460	COG0408	coproporphyrinogen oxidase activity
ADP71_11530	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ADP71_11590	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ADP71_11610	COG2233	PERMEase
ADP71_11650	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
ADP71_11660	COG3639	organic phosphonate transmembrane transporter activity
ADP71_11670	COG3624	Phosphonate C-P lyase system protein PhnG
ADP71_11690	COG3626	phosphonate metabolism
ADP71_11700	COG3627	carbon phosphorus lyase activity
ADP71_11710	COG4107	phosphonate C-P lyase system protein PhnK
ADP71_11720	COG4778	phosphonate C-P lyase system protein PhnL
ADP71_11730	COG3454	Phosphonate metabolism
ADP71_11750	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ADP71_11800	COG0833	amino acid
ADP71_11810	COG2814	Major facilitator Superfamily
ADP71_11850	COG3384	dioxygenase
ADP71_11890	COG4607	ABC-type enterochelin transport system periplasmic component
ADP71_11910	COG4604	ABC transporter, ATP-binding protein
ADP71_11920	COG4605	iron ion homeostasis
ADP71_11930	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ADP71_11950	COG4772	TonB-dependent receptor
ADP71_12090	COG1643	Atp-dependent helicase
ADP71_12110	COG2304	oxidoreductase activity
ADP71_12120	COG2081	HI0933 family
ADP71_12140	COG0010	Belongs to the arginase family
ADP71_12200	COG2986	histidine ammonia-lyase
ADP71_12240	COG1584	GPR1 FUN34 yaaH family protein
ADP71_12300	COG0133	tryptophan synthase activity
ADP71_12310	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_12340	COG0183	Belongs to the thiolase family
ADP71_12350	COG3243	poly(R)-hydroxyalkanoic acid synthase
ADP71_12360	COG0494	nUDIX hydrolase
ADP71_12380	COG1970	mechanosensitive ion channel activity
ADP71_12400	COG4166	transmembrane transport
ADP71_12480	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ADP71_12510	COG0704	Plays a role in the regulation of phosphate uptake
ADP71_12530	COG0393	Putative heavy-metal-binding
ADP71_12540	COG0393	Putative heavy-metal-binding
ADP71_12550	COG0513	Belongs to the DEAD box helicase family
ADP71_12580	COG2217	Heavy metal translocating P-type atpase
ADP71_12620	COG1561	YicC-like family, N-terminal region
ADP71_12640	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ADP71_12650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ADP71_12730	COG1187	pseudouridine synthase activity
ADP71_12740	COG1802	Transcriptional regulator
ADP71_12800	COG3842	ATPase activity
ADP71_12810	COG1176	ABC-type spermidine putrescine transport system, permease component I
ADP71_12830	COG1177	transmembrane transport
ADP71_12840	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_12850	COG0235	Class ii aldolase
ADP71_12890	COG0300	oxidoreductase activity
ADP71_12930	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ADP71_12950	COG1408	metallophosphoesterase
ADP71_12970	COG1032	radical SAM domain protein
ADP71_13050	COG0210	DNA helicase
ADP71_13090	COG0617	tRNA 3'-terminal CCA addition
ADP71_13210	COG0492	ferredoxin-NADP+ reductase activity
ADP71_13220	COG0859	PFAM glycosyl transferase family 9
ADP71_13270	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ADP71_13290	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ADP71_13320	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ADP71_13330	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ADP71_13340	COG0583	DNA-binding transcription factor activity
ADP71_13410	COG4221	oxidoreductase activity
ADP71_13450	COG4774	siderophore transport
ADP71_13480	COG4615	Cyclic peptide transporter
ADP71_13540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ADP71_13550	COG1120	ATPase activity
ADP71_13560	COG3949	Membrane
ADP71_13570	COG4239	(ABC) transporter, permease
ADP71_13580	COG4174	ABC transporter (Permease)
ADP71_13590	COG2833	Protein of unknown function (DUF455)
ADP71_13670	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ADP71_13700	COG1271	oxidase subunit
ADP71_13710	COG1294	oxidase, subunit
ADP71_13780	COG3048	D-serine ammonia-lyase activity
ADP71_13810	COG0583	DNA-binding transcription factor activity
ADP71_13860	COG2835	tetraacyldisaccharide 4'-kinase activity
ADP71_13910	COG0788	formyltetrahydrofolate deformylase activity
ADP71_13960	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ADP71_13960	COG0446	pyridine nucleotide-disulphide oxidoreductase
ADP71_14010	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ADP71_14220	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ADP71_14320	COG2801	Transposase and inactivated derivatives
ADP71_14380	COG0582	viral genome integration into host DNA
ADP71_14420	COG2873	o-acetylhomoserine
ADP71_14430	COG1187	pseudouridine synthase activity
ADP71_14450	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ADP71_14460	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ADP71_14480	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ADP71_14560	COG3275	phosphorelay sensor kinase activity
ADP71_14600	COG0708	Exodeoxyribonuclease III
ADP71_14650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_14660	COG2814	Major facilitator Superfamily
ADP71_14710	COG1053	succinate dehydrogenase
ADP71_14770	COG1053	succinate dehydrogenase
ADP71_14820	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ADP71_14830	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_14850	COG1414	Transcriptional regulator
ADP71_14870	COG2801	Transposase and inactivated derivatives
ADP71_14930	COG0277	FAD linked oxidase domain protein
ADP71_14990	COG0659	secondary active sulfate transmembrane transporter activity
ADP71_15020	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ADP71_15060	COG0793	Belongs to the peptidase S41A family
ADP71_15080	COG0069	glutamate synthase activity
ADP71_15080	COG0067	glutamate synthase
ADP71_15080	COG0070	glutamate synthase
ADP71_15140	COG0493	'glutamate synthase
ADP71_15180	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
ADP71_15190	COG1671	Belongs to the UPF0178 family
ADP71_15240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ADP71_15270	COG2271	Major facilitator Superfamily
ADP71_15330	COG4681	YaeQ
ADP71_15450	COG0714	Associated with various cellular activities
ADP71_15490	COG3552	Protein containing von Willebrand factor type A (VWA) domain
ADP71_15510	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ADP71_15640	COG0386	Belongs to the glutathione peroxidase family
ADP71_15660	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ADP71_15760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ADP71_15790	COG1686	Belongs to the peptidase S11 family
ADP71_15810	COG0583	DNA-binding transcription factor activity
ADP71_15830	COG1960	acyl-CoA dehydrogenase activity
ADP71_15840	COG1022	Amp-dependent synthetase and ligase
ADP71_15840	COG3320	Male sterility
ADP71_15860	COG1012	belongs to the aldehyde dehydrogenase family
ADP71_15880	COG1024	Enoyl-CoA hydratase
ADP71_15890	COG2814	Major facilitator Superfamily
ADP71_15920	COG3949	Membrane
ADP71_15960	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ADP71_15990	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ADP71_16000	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ADP71_16090	COG4172	Belongs to the ABC transporter superfamily
ADP71_16110	COG5544	Lipoprotein
ADP71_16130	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ADP71_16150	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ADP71_16150	COG2813	Specifically methylates the guanine in position
ADP71_16210	COG5510	response to toxic substance
ADP71_16250	COG2995	paraquat-inducible protein a
ADP71_16300	COG2153	protein acetylation
ADP71_16310	COG0697	spore germination
ADP71_16450	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
ADP71_16500	COG0195	Participates in both transcription termination and antitermination
ADP71_16500	COG2251	uridine kinase activity
ADP71_16690	COG2837	iron assimilation
ADP71_16730	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ADP71_16740	COG0511	ligase activity, forming carbon-carbon bonds
ADP71_16750	COG0439	Biotin carboxylase
ADP71_16760	COG2264	protein methyltransferase activity
ADP71_16810	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
ADP71_16970	COG0582	viral genome integration into host DNA
ADP71_17710	COG1278	Cold shock
ADP71_17870	COG3561	AntA/AntB antirepressor
ADP71_18140	COG2801	Transposase and inactivated derivatives
ADP71_18270	COG1758	RNA polymerase activity
ADP71_18280	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ADP71_18300	COG1610	YqeY-like protein
ADP71_18400	COG0557	exoribonuclease II activity
ADP71_18420	COG2070	2-Nitropropane dioxygenase
ADP71_18450	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ADP71_18480	COG0633	Ferredoxin
ADP71_18500	COG4628	conserved protein (DUF2132)
ADP71_18510	COG2814	Major facilitator Superfamily
ADP71_18540	COG3135	benzoate transporter
ADP71_18560	COG1396	sequence-specific DNA binding
ADP71_18610	COG3878	Protein conserved in bacteria
ADP71_18630	COG1454	alcohol dehydrogenase
ADP71_18650	COG2610	gluconate transmembrane transporter activity
ADP71_18690	COG1414	Transcriptional regulator
ADP71_18710	COG0814	amino acid
ADP71_18750	COG0814	amino acid
ADP71_18790	COG0765	amino acid transport
ADP71_18810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ADP71_18850	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ADP71_18870	COG0347	Belongs to the P(II) protein family
ADP71_18920	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ADP71_18940	COG0183	Belongs to the thiolase family
ADP71_18950	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ADP71_18970	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ADP71_18990	COG4829	muconolactone delta-isomerase
ADP71_19000	COG4948	Mandelate Racemase Muconate Lactonizing
ADP71_19010	COG0543	2 iron, 2 sulfur cluster binding
ADP71_19010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ADP71_19020	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ADP71_19030	COG4638	Rieske (2fe-2S)
ADP71_19040	COG2207	Transcriptional regulator
ADP71_19050	COG2814	Major facilitator Superfamily
ADP71_19080	COG1012	belongs to the aldehyde dehydrogenase family
ADP71_19100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ADP71_19290	COG0765	amino acid transport
ADP71_19310	COG1126	abc transporter atp-binding protein
ADP71_19400	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ADP71_19440	COG0508	dehydrogenase complex catalyzes the overall conversion of
ADP71_19450	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ADP71_19490	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ADP71_19530	COG0583	DNA-binding transcription factor activity
ADP71_19630	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ADP71_19630	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ADP71_19640	COG0569	domain protein
ADP71_19650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ADP71_19730	COG1960	acyl-CoA dehydrogenase activity
ADP71_19770	COG1047	Peptidyl-prolyl cis-trans
ADP71_19780	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ADP71_19800	COG4651	solute:proton antiporter activity
ADP71_19800	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ADP71_19810	COG0730	response to heat
ADP71_19860	COG2959	enzyme of heme biosynthesis
ADP71_19950	COG0745	RESPONSE REGULATOR receiver
ADP71_19970	COG5002	protein histidine kinase activity
ADP71_20000	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ADP71_20020	COG0596	Alpha beta hydrolase
ADP71_20050	COG0287	Prephenate dehydrogenase
ADP71_20130	COG1619	proteins homologs of microcin C7 resistance protein MccF
ADP71_20150	COG0805	protein transport
ADP71_20170	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ADP71_20200	COG0140	phosphoribosyl-ATP diphosphatase activity
ADP71_20250	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ADP71_20340	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ADP71_20390	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ADP71_20400	COG1137	ATPase activity
ADP71_20440	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ADP71_20520	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ADP71_20530	COG0572	uridine kinase
ADP71_20590	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ADP71_20620	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ADP71_20630	COG0297	glycogen (starch) synthase activity
ADP71_20640	COG0860	N-Acetylmuramoyl-L-alanine amidase
ADP71_20650	COG0802	atpase or kinase
ADP71_20660	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ADP71_20680	COG1058	Belongs to the CinA family
ADP71_20680	COG1546	Belongs to the CinA family
ADP71_20700	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ADP71_20720	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_20770	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ADP71_20780	COG1845	cytochrome c oxidase, subunit III
ADP71_20790	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ADP71_20800	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ADP71_20810	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ADP71_20870	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ADP71_20960	COG0069	glutamate synthase activity
ADP71_20970	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ADP71_21000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ADP71_21010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ADP71_21030	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ADP71_21120	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ADP71_21160	COG0586	Pfam SNARE associated Golgi protein
ADP71_21200	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ADP71_21210	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ADP71_21220	COG1534	Rna-binding protein
ADP71_21260	COG2814	Major facilitator Superfamily
ADP71_21280	COG0739	heme binding
ADP71_21280	COG1196	nuclear chromosome segregation
ADP71_21280	COG0741	lytic transglycosylase activity
ADP71_21360	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ADP71_21480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_21540	COG0312	modulator of DNA gyrase
ADP71_21600	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ADP71_21610	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ADP71_21620	COG0004	ammonium transporteR
ADP71_21660	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ADP71_21670	COG1335	isochorismatase
ADP71_21710	COG3186	Phenylalanine-4-hydroxylase
ADP71_21800	COG1562	ergosterol biosynthetic process
ADP71_21830	COG1238	metal cluster binding
ADP71_21860	COG0300	oxidoreductase activity
ADP71_21880	COG0424	maF-like protein
ADP71_21900	COG1530	ribonuclease E activity
ADP71_22000	COG1448	Aminotransferase
ADP71_22020	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ADP71_22050	COG4206	TonB-dependent receptor
ADP71_22100	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ADP71_22120	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ADP71_22310	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ADP71_22360	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ADP71_22430	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ADP71_22440	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ADP71_22460	COG1024	Enoyl-CoA hydratase
ADP71_22470	COG1024	Enoyl-CoA hydratase
ADP71_22510	COG0659	secondary active sulfate transmembrane transporter activity
ADP71_22580	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ADP71_22590	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ADP71_22620	COG0697	spore germination
ADP71_22670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ADP71_22690	COG0174	glutamine synthetase
ADP71_22710	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ADP71_22710	COG0519	Catalyzes the synthesis of GMP from XMP
ADP71_22810	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ADP71_22810	COG0519	Catalyzes the synthesis of GMP from XMP
ADP71_22940	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ADP71_23030	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ADP71_23080	COG0592	DNA-directed DNA polymerase activity
ADP71_23160	COG0419	ATPase involved in DNA repair
ADP71_23220	COG2608	mercury ion transmembrane transporter activity
ADP71_23230	COG1250	3-hydroxyacyl-CoA dehydrogenase
ADP71_23270	COG0523	cobalamin synthesis protein
ADP71_23280	COG0735	belongs to the Fur family
ADP71_23350	COG0513	Belongs to the DEAD box helicase family
ADP71_23430	COG1187	pseudouridine synthase activity
ADP71_23440	COG1741	Belongs to the pirin family
ADP71_23460	COG0791	NLP P60 protein
ADP71_23520	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ADP71_23570	COG1358	cellular component organization or biogenesis
ADP71_23810	COG4245	von Willebrand factor, type A
ADP71_23850	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ADP71_23980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ADP71_24060	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ADP71_24080	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ADP71_24100	COG2096	Adenosyltransferase
ADP71_24110	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ADP71_24160	COG2070	2-Nitropropane dioxygenase
ADP71_24290	COG0105	UTP biosynthetic process
ADP71_24310	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ADP71_24380	COG1116	anion transmembrane transporter activity
ADP71_24390	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ADP71_24410	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ADP71_24420	COG0431	NADPH-dependent FMN reductase
ADP71_24430	COG2839	Protein conserved in bacteria
ADP71_24450	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ADP71_24470	COG1686	Belongs to the peptidase S11 family
ADP71_24490	COG0583	DNA-binding transcription factor activity
ADP71_24520	COG2329	Antibiotic biosynthesis monooxygenase
ADP71_24530	COG4771	TonB-dependent receptor
ADP71_24560	COG4558	Periplasmic binding protein
ADP71_24570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ADP71_24580	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ADP71_24590	COG2271	Major facilitator Superfamily
ADP71_24610	COG2814	Major facilitator Superfamily
ADP71_24690	COG0412	Dienelactone hydrolase
ADP71_24700	COG0697	spore germination
ADP71_24750	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ADP71_24760	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ADP71_24800	COG0084	hydrolase, TatD family'
ADP71_24820	COG0321	lipoyl(octanoyl) transferase activity
ADP71_24820	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ADP71_24850	COG0326	Molecular chaperone. Has ATPase activity
ADP71_24920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ADP71_24930	COG1702	phosphate starvation-inducible protein PhoH
ADP71_24960	COG4535	Mg2 and Co2 transporter CorC
ADP71_24980	COG2354	Protein conserved in bacteria
ADP71_25100	COG1122	ATPase activity
ADP71_25140	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ADP71_25190	COG1505	serine-type exopeptidase activity
ADP71_25230	COG0312	modulator of DNA gyrase
ADP71_25270	COG0024	Methionine aminopeptidase
ADP71_25330	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
ADP71_25440	COG0446	pyridine nucleotide-disulphide oxidoreductase
ADP71_25440	COG1902	pentaerythritol trinitrate reductase activity
ADP71_25570	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ADP71_25690	COG0318	PFAM AMP-dependent synthetase and ligase
ADP71_25700	COG2079	MmgE PrpD family protein
ADP71_25710	COG0372	Belongs to the citrate synthase family
ADP71_25720	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ADP71_25810	COG2224	Isocitrate lyase
ADP71_25830	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ADP71_25850	COG2267	carboxylic ester hydrolase activity
ADP71_25870	COG4589	Belongs to the CDS family
ADP71_25880	COG0625	glutathione transferase activity
ADP71_25890	COG0308	aminopeptidase N
ADP71_25990	COG0489	protein tyrosine kinase activity
ADP71_25990	COG3206	protein involved in exopolysaccharide biosynthesis
ADP71_26040	COG1596	polysaccharide export
ADP71_26070	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_26100	COG4575	ribosome binding
ADP71_26110	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ADP71_26130	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ADP71_26160	COG0508	dehydrogenase complex catalyzes the overall conversion of
ADP71_26180	COG0567	Dehydrogenase, E1 component
ADP71_26200	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ADP71_26210	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ADP71_26220	COG1053	succinate dehydrogenase
ADP71_26270	COG0039	L-malate dehydrogenase activity
ADP71_26320	COG1194	a g-specific adenine glycosylase
ADP71_26330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ADP71_26370	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ADP71_26390	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ADP71_26550	COG0678	peroxiredoxin activity
ADP71_26550	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ADP71_26610	COG0545	Peptidyl-prolyl cis-trans isomerase
ADP71_26640	COG4771	TonB-dependent receptor
ADP71_26660	COG4771	TonB-dependent receptor
ADP71_26670	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ADP71_26680	COG2860	membrane
ADP71_26710	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ADP71_26730	COG3545	Serine hydrolase
ADP71_26790	COG2885	chlorophyll binding
ADP71_26850	COG0683	leucine binding
ADP71_26860	COG0583	DNA-binding transcription factor activity
ADP71_26870	COG0697	spore germination
ADP71_26890	COG5383	Protein conserved in bacteria
ADP71_26900	COG0247	lactate metabolic process
ADP71_26900	COG0277	FAD linked oxidase domain protein
ADP71_26920	COG1012	belongs to the aldehyde dehydrogenase family
ADP71_26980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_27000	COG0583	DNA-binding transcription factor activity
ADP71_27090	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ADP71_27110	COG2895	sulfate adenylyltransferase (ATP) activity
ADP71_27120	COG0175	sulfate reduction
ADP71_27160	COG1648	precorrin-2 dehydrogenase activity
ADP71_27160	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ADP71_27170	COG1113	amino acid transport
ADP71_27190	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ADP71_27200	COG2900	Belongs to the SlyX family
ADP71_27210	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ADP71_27280	COG0356	it plays a direct role in the translocation of protons across the membrane
ADP71_27310	COG1192	Involved in chromosome partitioning
ADP71_27370	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
ADP71_27430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ADP71_27490	COG0583	DNA-binding transcription factor activity
ADP71_27510	COG2159	amidohydrolase
ADP71_27590	COG0667	Aldo Keto reductase
ADP71_27640	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ADP71_27640	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ADP71_27750	COG0477	Major facilitator Superfamily
ADP71_27810	COG1560	Kdo2-lipid A biosynthetic process
ADP71_27950	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ADP71_28000	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ADP71_28010	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ADP71_28090	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ADP71_28110	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ADP71_28130	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ADP71_28160	COG0581	inorganic phosphate transmembrane transporter activity
ADP71_28170	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ADP71_28190	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ADP71_28200	COG0306	phosphate transporter
ADP71_28230	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ADP71_28240	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ADP71_28250	COG1012	belongs to the aldehyde dehydrogenase family
ADP71_28280	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ADP71_28350	COG1960	acyl-CoA dehydrogenase activity
ADP71_28360	COG0861	Integral membrane protein TerC family
ADP71_28470	COG0714	Associated with various cellular activities
ADP71_28650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_28870	COG1115	amino acid carrier protein
ADP71_28890	COG1802	Transcriptional regulator
ADP71_28940	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ADP71_28950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ADP71_29020	COG0824	Thioesterase
ADP71_29080	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ADP71_29090	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ADP71_29100	COG1127	ABC transporter
ADP71_29130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ADP71_29160	COG2252	PERMEase
ADP71_29170	COG1131	(ABC) transporter
ADP71_29180	COG0842	Transport permease protein
ADP71_29210	COG1999	signal sequence binding
ADP71_29220	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ADP71_29240	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ADP71_29270	COG1794	racemase activity, acting on amino acids and derivatives
ADP71_29280	COG1733	regulation of RNA biosynthetic process
ADP71_29290	COG4224	UPF0291 protein
ADP71_29320	COG0463	Glycosyl transferase, family 2
ADP71_29330	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ADP71_29350	COG0142	geranyltranstransferase activity
ADP71_29410	COG4221	oxidoreductase activity
ADP71_29480	COG0557	exoribonuclease II activity
ADP71_29550	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ADP71_29610	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ADP71_29750	COG2364	Membrane
ADP71_29770	COG2884	Cell division ATP-binding protein ftsE
ADP71_29820	COG0612	Peptidase, M16
ADP71_29870	COG1272	protein, Hemolysin III
ADP71_29890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ADP71_29940	COG0859	PFAM glycosyl transferase family 9
ADP71_29960	COG2086	electron transfer activity
ADP71_29990	COG1739	Uncharacterized protein family UPF0029
ADP71_30040	COG2119	membrane
ADP71_30080	COG0210	DNA helicase
ADP71_30110	COG2962	Rard protein
ADP71_30160	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ADP71_30190	COG3279	Response regulator of the LytR AlgR family
ADP71_30200	COG0656	L-ascorbic acid biosynthetic process
ADP71_30240	COG0646	methionine synthase
ADP71_30240	COG1410	methionine synthase
ADP71_30260	COG1166	arginine decarboxylase activity
ADP71_30290	COG0625	glutathione transferase activity
ADP71_30320	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
ADP71_30330	COG1011	Hydrolase
ADP71_30360	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ADP71_30370	COG1742	UPF0060 membrane protein
ADP71_30410	COG0613	PHP domain protein
ADP71_30430	COG0009	L-threonylcarbamoyladenylate synthase
ADP71_30440	COG1994	Peptidase M50
ADP71_30460	COG0514	ATP-dependent DNA helicase (RecQ)
ADP71_30580	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ADP71_30680	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ADP71_30700	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ADP71_30780	COG1199	ATP-dependent helicase activity
ADP71_30860	COG0436	Aminotransferase
ADP71_30870	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ADP71_30910	COG1132	(ABC) transporter
ADP71_30930	COG2259	Doxx family
ADP71_30940	COG0583	DNA-binding transcription factor activity
ADP71_30950	COG4221	oxidoreductase activity
ADP71_30970	COG3237	CsbD-like
ADP71_31000	COG1752	Esterase of the alpha-beta hydrolase superfamily
ADP71_31010	COG2226	methyltransferase
ADP71_31030	COG1040	competence protein
ADP71_31070	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ADP71_31130	COG0489	protein tyrosine kinase activity
ADP71_31140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ADP71_31190	COG1519	Transferase
ADP71_31280	COG1247	-acetyltransferase
ADP71_31300	COG1247	-acetyltransferase
ADP71_31330	COG4774	siderophore transport
ADP71_31340	COG3128	pkhd-type hydroxylase
ADP71_31360	COG1956	GAF domain-containing protein
ADP71_31540	COG4197	protein conserved in bacteria, prophage-related
ADP71_31690	COG4695	Portal protein
ADP71_32040	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ADP71_32100	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ADP71_32130	COG0788	formyltetrahydrofolate deformylase activity
ADP71_32140	COG2832	Protein of unknown function (DUF454)
ADP71_32190	COG0509	glycine decarboxylation via glycine cleavage system
ADP71_32200	COG4682	membrane
ADP71_32230	COG2814	Major facilitator Superfamily
ADP71_32420	COG1280	lysine exporter protein (LysE YggA)
ADP71_32460	COG0739	heme binding
ADP71_32530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ADP71_32550	COG2201	protein-glutamate methylesterase activity
ADP71_32560	COG0643	Histidine kinase
ADP71_32560	COG2198	Histidine kinase
ADP71_32620	COG0288	reversible hydration of carbon dioxide
ADP71_32640	COG0799	negative regulation of ribosome biogenesis
ADP71_32690	COG2030	dehydratase
ADP71_32700	COG5002	protein histidine kinase activity
ADP71_32720	COG0745	RESPONSE REGULATOR receiver
ADP71_32730	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ADP71_32740	COG1879	ABC-type sugar transport system periplasmic component
ADP71_32750	COG1172	Belongs to the binding-protein-dependent transport system permease family
ADP71_32770	COG1869	D-ribose catabolic process
ADP71_32800	COG0758	DNA mediated transformation
ADP71_32810	COG1652	LysM domain
ADP71_32840	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ADP71_32850	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ADP71_32850	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ADP71_32920	COG5000	phosphorelay sensor kinase activity
ADP71_32930	COG2204	response regulator
ADP71_32970	COG0742	ribosomal rna small subunit methyltransferase
ADP71_32980	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ADP71_33300	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ADP71_33310	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ADP71_33430	COG0200	Binds to the 23S rRNA
ADP71_33440	COG0201	protein transport
ADP71_33570	COG0765	amino acid transport
ADP71_33580	COG0765	amino acid transport
ADP71_33590	COG1126	abc transporter atp-binding protein
ADP71_33600	COG1113	amino acid transport
ADP71_33620	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ADP71_33630	COG2715	membrane protein required for spore maturation
ADP71_40100	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40110	COG0254	rRNA binding
ADP71_40230	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40290	COG1028	Short-chain dehydrogenase reductase Sdr
ADP71_40310	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40320	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40390	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40400	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40460	COG3949	Membrane
ADP71_40530	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40540	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40580	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ADP71_40640	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ADP71_40670	COG3313	Fe-S protein
ADP71_40800	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40810	COG2826	transposase and inactivated derivatives, IS30 family
ADP71_40970	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY