locus-tag class description LCH97_00005 PF02504 Fatty acid synthesis protein LCH97_00010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCH97_00010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCH97_00015 PF00698 Acyl transferase domain LCH97_00025 PF00550 Phosphopantetheine attachment site LCH97_00030 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH97_00030 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH97_00035 PF04715 Anthranilate synthase component I, N terminal region LCH97_00035 PF00425 chorismate binding enzyme LCH97_00045 PF01063 Amino-transferase class IV LCH97_00050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_00050 PF08447 PAS fold LCH97_00050 PF13426 PAS domain LCH97_00060 PF02153 Prephenate dehydrogenase LCH97_00060 PF01842 ACT domain LCH97_00065 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LCH97_00080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCH97_00085 PF02224 Cytidylate kinase LCH97_00090 PF00575 S1 RNA binding domain LCH97_00095 PF00216 Bacterial DNA-binding protein LCH97_00105 PF18073 Rubredoxin metal binding domain LCH97_00110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LCH97_00115 PF00294 pfkB family carbohydrate kinase LCH97_00125 PF01370 NAD dependent epimerase/dehydratase family LCH97_00135 PF03477 ATP cone domain LCH97_00145 PF13302 Acetyltransferase (GNAT) domain LCH97_00150 PF01872 RibD C-terminal domain LCH97_00150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCH97_00155 PF02615 Malate/L-lactate dehydrogenase LCH97_00165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LCH97_00170 PF00990 Diguanylate cyclase, GGDEF domain LCH97_00170 PF08448 PAS fold LCH97_00190 PF00155 Aminotransferase class I and II LCH97_00190 PF00392 Bacterial regulatory proteins, gntR family LCH97_00200 PF01177 Asp/Glu/Hydantoin racemase LCH97_00210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_00215 PF12729 Four helix bundle sensory module for signal transduction LCH97_00215 PF00672 HAMP domain LCH97_00215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_00220 PF17757 UvrB interaction domain LCH97_00220 PF02559 CarD-like/TRCF domain LCH97_00220 PF03461 TRCF domain LCH97_00220 PF00271 Helicase conserved C-terminal domain LCH97_00220 PF00270 DEAD/DEAH box helicase LCH97_00230 PF00990 Diguanylate cyclase, GGDEF domain LCH97_00230 PF03707 Bacterial signalling protein N terminal repeat LCH97_00230 PF00563 EAL domain LCH97_00235 PF00588 SpoU rRNA Methylase family LCH97_00235 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCH97_00240 PF07731 Multicopper oxidase LCH97_00240 PF07732 Multicopper oxidase LCH97_00245 PF02583 Metal-sensitive transcriptional repressor LCH97_00255 PF01250 Ribosomal protein S6 LCH97_00265 PF01084 Ribosomal protein S18 LCH97_00270 PF01281 Ribosomal protein L9, N-terminal domain LCH97_00270 PF03948 Ribosomal protein L9, C-terminal domain LCH97_00280 PF13737 Transposase DDE domain LCH97_00290 PF00583 Acetyltransferase (GNAT) family LCH97_00295 PF01565 FAD binding domain LCH97_00295 PF02913 FAD linked oxidases, C-terminal domain LCH97_00300 PF00857 Isochorismatase family LCH97_00310 PF00293 NUDIX domain LCH97_00330 PF00308 Bacterial dnaA protein LCH97_00330 PF08299 Bacterial dnaA protein helix-turn-helix LCH97_00335 PF01594 AI-2E family transporter LCH97_00340 PF00586 AIR synthase related protein, N-terminal domain LCH97_00340 PF02769 AIR synthase related protein, C-terminal domain LCH97_00345 PF00551 Formyl transferase LCH97_00355 PF01029 NusB family LCH97_00355 PF01189 16S rRNA methyltransferase RsmB/F LCH97_00360 PF00462 Glutaredoxin LCH97_00375 PF00860 Permease family LCH97_00385 PF01040 UbiA prenyltransferase family LCH97_00390 PF04345 Chorismate lyase LCH97_00395 PF03788 LrgA family LCH97_00400 PF04172 LrgB-like family LCH97_00435 PF01619 Proline dehydrogenase LCH97_00435 PF00171 Aldehyde dehydrogenase family LCH97_00435 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LCH97_00435 PF14850 DNA-binding domain of Proline dehydrogenase LCH97_00440 PF13458 Periplasmic binding protein LCH97_00450 PF00171 Aldehyde dehydrogenase family LCH97_00460 PF01266 FAD dependent oxidoreductase LCH97_00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_00465 PF03466 LysR substrate binding domain LCH97_00470 PF01609 Transposase DDE domain LCH97_00470 PF13006 Insertion element 4 transposase N-terminal LCH97_00475 PF00436 Single-strand binding protein family LCH97_00480 PF07690 Major Facilitator Superfamily LCH97_00485 PF17760 UvrA interaction domain LCH97_00485 PF17755 UvrA DNA-binding domain LCH97_00510 PF00873 AcrB/AcrD/AcrF family LCH97_00520 PF00581 Rhodanese-like domain LCH97_00530 PF04381 Putative exonuclease, RdgC LCH97_00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH97_00555 PF00392 Bacterial regulatory proteins, gntR family LCH97_00555 PF00155 Aminotransferase class I and II LCH97_00560 PF00114 Pilin (bacterial filament) LCH97_00560 PF07963 Prokaryotic N-terminal methylation motif LCH97_00595 PF01661 Macro domain LCH97_00600 PF00291 Pyridoxal-phosphate dependent enzyme LCH97_00625 PF00255 Glutathione peroxidase LCH97_00630 PF00692 dUTPase LCH97_00635 PF00210 Ferritin-like domain LCH97_00640 PF00486 Transcriptional regulatory protein, C terminal LCH97_00640 PF00072 Response regulator receiver domain LCH97_00645 PF00512 His Kinase A (phospho-acceptor) domain LCH97_00645 PF08448 PAS fold LCH97_00645 PF13188 PAS domain LCH97_00645 PF00072 Response regulator receiver domain LCH97_00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_00650 PF01547 Bacterial extracellular solute-binding protein LCH97_00655 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_00660 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_00665 PF00128 Alpha amylase, catalytic domain LCH97_00670 PF00005 ABC transporter LCH97_00670 PF17912 MalK OB fold domain LCH97_00670 PF03459 TOBE domain LCH97_00675 PF00267 Gram-negative porin LCH97_00680 PF00294 pfkB family carbohydrate kinase LCH97_00685 PF01741 Large-conductance mechanosensitive channel, MscL LCH97_00690 PF02652 L-lactate permease LCH97_00695 PF00149 Calcineurin-like phosphoesterase LCH97_00700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCH97_00705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCH97_00725 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_00730 PF00005 ABC transporter LCH97_00730 PF08402 TOBE domain LCH97_00735 PF00768 D-alanyl-D-alanine carboxypeptidase LCH97_00740 PF00271 Helicase conserved C-terminal domain LCH97_00740 PF17757 UvrB interaction domain LCH97_00740 PF12344 Ultra-violet resistance protein B LCH97_00740 PF02151 UvrB/uvrC motif LCH97_00740 PF04851 Type III restriction enzyme, res subunit LCH97_00745 PF01451 Low molecular weight phosphotyrosine protein phosphatase LCH97_00750 PF00072 Response regulator receiver domain LCH97_00750 PF01339 CheB methylesterase LCH97_00755 PF02954 Bacterial regulatory protein, Fis family LCH97_00755 PF00072 Response regulator receiver domain LCH97_00755 PF00158 Sigma-54 interaction domain LCH97_00760 PF02049 Flagellar hook-basal body complex protein FliE LCH97_00765 PF01514 Secretory protein of YscJ/FliF family LCH97_00765 PF08345 Flagellar M-ring protein C-terminal LCH97_00770 PF01706 FliG C-terminal domain LCH97_00770 PF14841 FliG middle domain LCH97_00770 PF14842 FliG N-terminal domain LCH97_00780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH97_00780 PF18269 T3SS EscN ATPase C-terminal domain LCH97_00800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCH97_00800 PF02154 Flagellar motor switch protein FliM LCH97_00805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCH97_00805 PF16973 Flagellar motor switch protein FliN N-terminal LCH97_00810 PF04347 Flagellar biosynthesis protein, FliO LCH97_00815 PF00813 FliP family LCH97_00820 PF01313 Bacterial export proteins, family 3 LCH97_00825 PF01311 Bacterial export proteins, family 1 LCH97_00830 PF01709 Transcriptional regulator LCH97_00840 PF04960 Glutaminase LCH97_00845 PF01966 HD domain LCH97_00850 PF01618 MotA/TolQ/ExbB proton channel family LCH97_00855 PF00472 RF-1 domain LCH97_00860 PF00563 EAL domain LCH97_00860 PF00990 Diguanylate cyclase, GGDEF domain LCH97_00860 PF08447 PAS fold LCH97_00860 PF08448 PAS fold LCH97_00865 PF02913 FAD linked oxidases, C-terminal domain LCH97_00865 PF01565 FAD binding domain LCH97_00870 PF00005 ABC transporter LCH97_00870 PF06472 ABC transporter transmembrane region 2 LCH97_00875 PF09190 DALR domain LCH97_00875 PF01406 tRNA synthetases class I (C) catalytic domain LCH97_00880 PF01197 Ribosomal protein L31 LCH97_00895 PF00501 AMP-binding enzyme LCH97_00895 PF13193 AMP-binding enzyme C-terminal domain LCH97_00910 PF00682 HMGL-like LCH97_00920 PF02785 Biotin carboxylase C-terminal domain LCH97_00920 PF00289 Biotin carboxylase, N-terminal domain LCH97_00920 PF00364 Biotin-requiring enzyme LCH97_00920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH97_00925 PF00378 Enoyl-CoA hydratase/isomerase LCH97_00930 PF01039 Carboxyl transferase domain LCH97_00935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_00935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_00935 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_00940 PF13411 MerR HTH family regulatory protein LCH97_00945 PF00501 AMP-binding enzyme LCH97_00945 PF13193 AMP-binding enzyme C-terminal domain LCH97_00950 PF02810 SEC-C motif LCH97_00950 PF03695 Uncharacterised protein family (UPF0149) LCH97_00965 PF01176 Translation initiation factor 1A / IF-1 LCH97_00970 PF01613 Flavin reductase like domain LCH97_00975 PF00990 Diguanylate cyclase, GGDEF domain LCH97_00980 PF12806 Acetyl-CoA dehydrogenase C-terminal like LCH97_00980 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_00980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_00980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_00990 PF00293 NUDIX domain LCH97_01000 PF08298 PrkA AAA domain LCH97_01000 PF06798 PrkA serine protein kinase C-terminal domain LCH97_01005 PF04285 Protein of unknown function (DUF444) LCH97_01010 PF04293 SpoVR like protein LCH97_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_01015 PF00512 His Kinase A (phospho-acceptor) domain LCH97_01015 PF18415 Histidine kinase receptor ArcB trans-membrane domain LCH97_01015 PF01627 Hpt domain LCH97_01015 PF00989 PAS fold LCH97_01015 PF00072 Response regulator receiver domain LCH97_01020 PF00072 Response regulator receiver domain LCH97_01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_01025 PF03466 LysR substrate binding domain LCH97_01030 PF16197 Ketoacyl-synthetase C-terminal extension LCH97_01030 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_01030 PF08659 KR domain LCH97_01030 PF00698 Acyl transferase domain LCH97_01030 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH97_01030 PF14765 Polyketide synthase dehydratase LCH97_01030 PF00550 Phosphopantetheine attachment site LCH97_01030 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH97_01045 PF02653 Branched-chain amino acid transport system / permease component LCH97_01055 PF00005 ABC transporter LCH97_01055 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCH97_01060 PF00005 ABC transporter LCH97_01065 PF01774 UreD urease accessory protein LCH97_01070 PF00547 Urease, gamma subunit LCH97_01075 PF00699 Urease beta subunit LCH97_01080 PF00449 Urease alpha-subunit, N-terminal domain LCH97_01080 PF01979 Amidohydrolase family LCH97_01085 PF05194 UreE urease accessory protein, C-terminal domain LCH97_01085 PF02814 UreE urease accessory protein, N-terminal domain LCH97_01090 PF01730 UreF LCH97_01095 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCH97_01100 PF04955 HupE / UreJ protein LCH97_01105 PF13737 Transposase DDE domain LCH97_01115 PF01113 Dihydrodipicolinate reductase, N-terminus LCH97_01115 PF05173 Dihydrodipicolinate reductase, C-terminus LCH97_01120 PF04355 SmpA / OmlA family LCH97_01125 PF01475 Ferric uptake regulator family LCH97_01130 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LCH97_01135 PF04376 Arginine-tRNA-protein transferase, N terminus LCH97_01135 PF04377 Arginine-tRNA-protein transferase, C terminus LCH97_01140 PF01180 Dihydroorotate dehydrogenase LCH97_01145 PF00881 Nitroreductase family LCH97_01150 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCH97_01150 PF00691 OmpA family LCH97_01155 PF06965 Na+/H+ antiporter 1 LCH97_01155 PF01343 Peptidase family S49 LCH97_01165 PF13419 Haloacid dehalogenase-like hydrolase LCH97_01170 PF01479 S4 domain LCH97_01170 PF00849 RNA pseudouridylate synthase LCH97_01175 PF00575 S1 RNA binding domain LCH97_01175 PF10150 Ribonuclease E/G family LCH97_01175 PF12111 Polyribonucleotide phosphorylase C terminal LCH97_01210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH97_01210 PF01411 tRNA synthetases class II (A) LCH97_01210 PF02272 DHHA1 domain LCH97_01215 PF02631 RecX family LCH97_01220 PF00154 recA bacterial DNA recombination protein LCH97_01225 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LCH97_01225 PF01628 HrcA protein C terminal domain LCH97_01230 PF13406 Transglycosylase SLT domain LCH97_01235 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LCH97_01235 PF12169 DNA polymerase III subunits gamma and tau domain III LCH97_01235 PF12170 DNA polymerase III tau subunit V interacting with alpha LCH97_01240 PF02575 YbaB/EbfC DNA-binding family LCH97_01245 PF02132 RecR protein LCH97_01245 PF13662 Toprim domain LCH97_01250 PF01546 Peptidase family M20/M25/M40 LCH97_01250 PF07687 Peptidase dimerisation domain LCH97_01255 PF03960 ArsC family LCH97_01260 PF00437 Type II/IV secretion system protein LCH97_01265 PF00501 AMP-binding enzyme LCH97_01265 PF13193 AMP-binding enzyme C-terminal domain LCH97_01270 PF17384 RimP C-terminal SH3 domain LCH97_01270 PF02576 RimP N-terminal domain LCH97_01275 PF13184 NusA-like KH domain LCH97_01275 PF08529 NusA N-terminal domain LCH97_01280 PF08364 Bacterial translation initiation factor IF-2 associated region LCH97_01280 PF11987 Translation-initiation factor 2 LCH97_01280 PF00009 Elongation factor Tu GTP binding domain LCH97_01280 PF04760 Translation initiation factor IF-2, N-terminal region LCH97_01285 PF02033 Ribosome-binding factor A LCH97_01290 PF16198 tRNA pseudouridylate synthase B C-terminal domain LCH97_01290 PF09157 Pseudouridine synthase II TruB, C-terminal LCH97_01290 PF01509 TruB family pseudouridylate synthase (N terminal domain) LCH97_01295 PF00312 Ribosomal protein S15 LCH97_01300 PF00013 KH domain LCH97_01300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LCH97_01300 PF01138 3' exoribonuclease family, domain 1 LCH97_01300 PF03725 3' exoribonuclease family, domain 2 LCH97_01300 PF00575 S1 RNA binding domain LCH97_01305 PF00474 Sodium:solute symporter family LCH97_01315 PF13193 AMP-binding enzyme C-terminal domain LCH97_01315 PF00501 AMP-binding enzyme LCH97_01320 PF00072 Response regulator receiver domain LCH97_01320 PF13426 PAS domain LCH97_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_01325 PF00486 Transcriptional regulatory protein, C terminal LCH97_01325 PF00072 Response regulator receiver domain LCH97_01330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCH97_01330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCH97_01335 PF00072 Response regulator receiver domain LCH97_01335 PF00486 Transcriptional regulatory protein, C terminal LCH97_01340 PF00202 Aminotransferase class-III LCH97_01345 PF04958 Arginine N-succinyltransferase beta subunit LCH97_01350 PF04958 Arginine N-succinyltransferase beta subunit LCH97_01355 PF00171 Aldehyde dehydrogenase family LCH97_01360 PF04996 Succinylarginine dihydrolase LCH97_01365 PF02653 Branched-chain amino acid transport system / permease component LCH97_01370 PF02653 Branched-chain amino acid transport system / permease component LCH97_01370 PF11862 Domain of unknown function (DUF3382) LCH97_01375 PF00005 ABC transporter LCH97_01375 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCH97_01380 PF00005 ABC transporter LCH97_01385 PF02698 DUF218 domain LCH97_01395 PF03193 RsgA GTPase LCH97_01400 PF00270 DEAD/DEAH box helicase LCH97_01400 PF00271 Helicase conserved C-terminal domain LCH97_01405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCH97_01405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCH97_01410 PF00378 Enoyl-CoA hydratase/isomerase LCH97_01415 PF00378 Enoyl-CoA hydratase/isomerase LCH97_01420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_01420 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_01420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_01425 PF00171 Aldehyde dehydrogenase family LCH97_01430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCH97_01430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCH97_01435 PF13411 MerR HTH family regulatory protein LCH97_01450 PF02803 Thiolase, C-terminal domain LCH97_01450 PF00108 Thiolase, N-terminal domain LCH97_01455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_01455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_01455 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_01460 PF00085 Thioredoxin LCH97_01460 PF02683 Cytochrome C biogenesis protein transmembrane region LCH97_01460 PF11412 Disulphide bond corrector protein DsbC LCH97_01470 PF02649 Type I GTP cyclohydrolase folE2 LCH97_01475 PF13194 Domain of unknown function (DUF4010) LCH97_01480 PF02780 Transketolase, C-terminal domain LCH97_01480 PF02779 Transketolase, pyrimidine binding domain LCH97_01480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LCH97_01485 PF00348 Polyprenyl synthetase LCH97_01490 PF02609 Exonuclease VII small subunit LCH97_01495 PF03741 Integral membrane protein TerC family LCH97_01500 PF00106 short chain dehydrogenase LCH97_01505 PF00990 Diguanylate cyclase, GGDEF domain LCH97_01510 PF10458 Valyl tRNA synthetase tRNA binding arm LCH97_01510 PF08264 Anticodon-binding domain of tRNA LCH97_01510 PF00133 tRNA synthetases class I (I, L, M and V) LCH97_01520 PF08448 PAS fold LCH97_01520 PF00990 Diguanylate cyclase, GGDEF domain LCH97_01545 PF01593 Flavin containing amine oxidoreductase LCH97_01550 PF00106 short chain dehydrogenase LCH97_01560 PF18073 Rubredoxin metal binding domain LCH97_01580 PF00593 TonB dependent receptor LCH97_01580 PF07715 TonB-dependent Receptor Plug Domain LCH97_01585 PF07690 Major Facilitator Superfamily LCH97_01590 PF00529 HlyD membrane-fusion protein of T1SS LCH97_01590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH97_01595 PF02321 Outer membrane efflux protein LCH97_01600 PF00440 Bacterial regulatory proteins, tetR family LCH97_01610 PF03109 ABC1 family LCH97_01615 PF00877 NlpC/P60 family LCH97_01625 PF02687 FtsX-like permease family LCH97_01625 PF12704 MacB-like periplasmic core domain LCH97_01630 PF00005 ABC transporter LCH97_01635 PF00924 Mechanosensitive ion channel LCH97_01635 PF12795 Mechanosensitive ion channel porin domain LCH97_01635 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCH97_01640 PF00072 Response regulator receiver domain LCH97_01640 PF00196 Bacterial regulatory proteins, luxR family LCH97_01645 PF00293 NUDIX domain LCH97_01650 PF00072 Response regulator receiver domain LCH97_01650 PF00486 Transcriptional regulatory protein, C terminal LCH97_01655 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_01655 PF00989 PAS fold LCH97_01655 PF01627 Hpt domain LCH97_01655 PF00512 His Kinase A (phospho-acceptor) domain LCH97_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_01655 PF00072 Response regulator receiver domain LCH97_01670 PF03372 Endonuclease/Exonuclease/phosphatase family LCH97_01680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH97_01685 PF12704 MacB-like periplasmic core domain LCH97_01685 PF02687 FtsX-like permease family LCH97_01685 PF00005 ABC transporter LCH97_01690 PF02321 Outer membrane efflux protein LCH97_01710 PF02424 ApbE family LCH97_01715 PF00667 FAD binding domain LCH97_01715 PF00175 Oxidoreductase NAD-binding domain LCH97_01715 PF00258 Flavodoxin LCH97_01720 PF07715 TonB-dependent Receptor Plug Domain LCH97_01720 PF00593 TonB dependent receptor LCH97_01735 PF00005 ABC transporter LCH97_01735 PF09383 NIL domain LCH97_01740 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_01745 PF03180 NLPA lipoprotein LCH97_01750 PF02321 Outer membrane efflux protein LCH97_01775 PF07517 SecA DEAD-like domain LCH97_01775 PF01043 SecA preprotein cross-linking domain LCH97_01800 PF05195 Aminopeptidase P, N-terminal domain LCH97_01800 PF00557 Metallopeptidase family M24 LCH97_01805 PF01494 FAD binding domain LCH97_01810 PF01494 FAD binding domain LCH97_01815 PF13098 Thioredoxin-like domain LCH97_01815 PF10411 Disulfide bond isomerase protein N-terminus LCH97_01840 PF10531 SLBB domain LCH97_01840 PF02563 Polysaccharide biosynthesis/export protein LCH97_01840 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LCH97_01845 PF13807 G-rich domain on putative tyrosine kinase LCH97_01845 PF02706 Chain length determinant protein LCH97_01845 PF13614 AAA domain LCH97_01850 PF00953 Glycosyl transferase family 4 LCH97_01855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCH97_01855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCH97_01855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LCH97_01870 PF03060 Nitronate monooxygenase LCH97_01875 PF01925 Sulfite exporter TauE/SafE LCH97_01885 PF04193 PQ loop repeat LCH97_01890 PF01925 Sulfite exporter TauE/SafE LCH97_01895 PF03741 Integral membrane protein TerC family LCH97_01900 PF01037 Lrp/AsnC ligand binding domain LCH97_01905 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LCH97_01915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH97_01915 PF00072 Response regulator receiver domain LCH97_01915 PF01627 Hpt domain LCH97_01915 PF00512 His Kinase A (phospho-acceptor) domain LCH97_01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_01915 PF00672 HAMP domain LCH97_01920 PF01274 Malate synthase LCH97_01925 PF03466 LysR substrate binding domain LCH97_01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_01935 PF01544 CorA-like Mg2+ transporter protein LCH97_01940 PF00005 ABC transporter LCH97_01940 PF00664 ABC transporter transmembrane region LCH97_01970 PF13309 HTH domain LCH97_01970 PF08348 YheO-like PAS domain LCH97_01975 PF02423 Ornithine cyclodeaminase/mu-crystallin family LCH97_01980 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_01985 PF01266 FAD dependent oxidoreductase LCH97_01990 PF03315 Serine dehydratase beta chain LCH97_01990 PF03313 Serine dehydratase alpha chain LCH97_01995 PF00464 Serine hydroxymethyltransferase LCH97_02005 PF13460 NAD(P)H-binding LCH97_02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02010 PF03466 LysR substrate binding domain LCH97_02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_02015 PF00672 HAMP domain LCH97_02015 PF02743 Cache domain LCH97_02020 PF02574 Homocysteine S-methyltransferase LCH97_02035 PF03880 DbpA RNA binding domain LCH97_02035 PF00270 DEAD/DEAH box helicase LCH97_02035 PF00271 Helicase conserved C-terminal domain LCH97_02060 PF03352 Methyladenine glycosylase LCH97_02070 PF08376 Nitrate and nitrite sensing LCH97_02070 PF03861 ANTAR domain LCH97_02080 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_02085 PF00005 ABC transporter LCH97_02090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LCH97_02090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LCH97_02090 PF18267 Rubredoxin NAD+ reductase C-terminal domain LCH97_02090 PF04324 BFD-like [2Fe-2S] binding domain LCH97_02090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_02095 PF00355 Rieske [2Fe-2S] domain LCH97_02100 PF04324 BFD-like [2Fe-2S] binding domain LCH97_02100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH97_02100 PF00384 Molybdopterin oxidoreductase LCH97_02100 PF01568 Molydopterin dinucleotide binding domain LCH97_02105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH97_02115 PF00155 Aminotransferase class I and II LCH97_02120 PF00141 Peroxidase LCH97_02125 PF13458 Periplasmic binding protein LCH97_02135 PF01266 FAD dependent oxidoreductase LCH97_02140 PF05544 Proline racemase LCH97_02145 PF00701 Dihydrodipicolinate synthetase family LCH97_02150 PF00171 Aldehyde dehydrogenase family LCH97_02155 PF07729 FCD domain LCH97_02155 PF00392 Bacterial regulatory proteins, gntR family LCH97_02160 PF08448 PAS fold LCH97_02160 PF00990 Diguanylate cyclase, GGDEF domain LCH97_02170 PF01227 GTP cyclohydrolase I LCH97_02175 PF02623 FliW protein LCH97_02180 PF04305 Protein of unknown function (DUF455) LCH97_02195 PF01136 Peptidase family U32 LCH97_02195 PF16325 Peptidase family U32 C-terminal domain LCH97_02200 PF12706 Beta-lactamase superfamily domain LCH97_02205 PF03485 Arginyl tRNA synthetase N terminal domain LCH97_02205 PF00750 tRNA synthetases class I (R) LCH97_02205 PF05746 DALR anticodon binding domain LCH97_02220 PF01321 Creatinase/Prolidase N-terminal domain LCH97_02220 PF00557 Metallopeptidase family M24 LCH97_02225 PF02803 Thiolase, C-terminal domain LCH97_02225 PF00108 Thiolase, N-terminal domain LCH97_02230 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LCH97_02235 PF12729 Four helix bundle sensory module for signal transduction LCH97_02235 PF00672 HAMP domain LCH97_02235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_02240 PF01557 Fumarylacetoacetate (FAA) hydrolase family LCH97_02245 PF01479 S4 domain LCH97_02265 PF00330 Aconitase family (aconitate hydratase) LCH97_02275 PF00694 Aconitase C-terminal domain LCH97_02280 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH97_02285 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH97_02285 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH97_02290 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH97_02290 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH97_02315 PF01416 tRNA pseudouridine synthase LCH97_02320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LCH97_02325 PF00291 Pyridoxal-phosphate dependent enzyme LCH97_02330 PF03992 Antibiotic biosynthesis monooxygenase LCH97_02335 PF00290 Tryptophan synthase alpha chain LCH97_02340 PF17848 Acetyl-coA carboxylase zinc finger domain LCH97_02340 PF01039 Carboxyl transferase domain LCH97_02350 PF00563 EAL domain LCH97_02350 PF03707 Bacterial signalling protein N terminal repeat LCH97_02350 PF00990 Diguanylate cyclase, GGDEF domain LCH97_02355 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LCH97_02360 PF00378 Enoyl-CoA hydratase/isomerase LCH97_02365 PF00561 alpha/beta hydrolase fold LCH97_02370 PF00360 Phytochrome region LCH97_02370 PF00990 Diguanylate cyclase, GGDEF domain LCH97_02370 PF00563 EAL domain LCH97_02370 PF01590 GAF domain LCH97_02375 PF08402 TOBE domain LCH97_02375 PF00005 ABC transporter LCH97_02380 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_02385 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_02390 PF01266 FAD dependent oxidoreductase LCH97_02395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCH97_02395 PF17944 Arginine decarboxylase C-terminal helical extension LCH97_02395 PF17810 Arginine decarboxylase helical bundle domain LCH97_02400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_02400 PF00672 HAMP domain LCH97_02405 PF01515 Phosphate acetyl/butaryl transferase LCH97_02405 PF07085 DRTGG domain LCH97_02410 PF00871 Acetokinase family LCH97_02415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LCH97_02415 PF00355 Rieske [2Fe-2S] domain LCH97_02425 PF00892 EamA-like transporter family LCH97_02430 PF00892 EamA-like transporter family LCH97_02440 PF00575 S1 RNA binding domain LCH97_02440 PF09371 Tex-like protein N-terminal domain LCH97_02440 PF17674 HHH domain LCH97_02440 PF16921 Tex protein YqgF-like domain LCH97_02475 PF00392 Bacterial regulatory proteins, gntR family LCH97_02475 PF00155 Aminotransferase class I and II LCH97_02480 PF07690 Major Facilitator Superfamily LCH97_02485 PF01047 MarR family LCH97_02490 PF00005 ABC transporter LCH97_02495 PF02687 FtsX-like permease family LCH97_02495 PF12704 MacB-like periplasmic core domain LCH97_02510 PF07694 5TMR of 5TMR-LYT LCH97_02510 PF06580 Histidine kinase LCH97_02515 PF04397 LytTr DNA-binding domain LCH97_02515 PF00072 Response regulator receiver domain LCH97_02520 PF06629 MltA-interacting protein MipA LCH97_02525 PF00849 RNA pseudouridylate synthase LCH97_02525 PF04287 tRNA pseudouridine synthase C LCH97_02535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_02550 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCH97_02550 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCH97_02555 PF01979 Amidohydrolase family LCH97_02570 PF02421 Ferrous iron transport protein B LCH97_02570 PF07664 Ferrous iron transport protein B C terminus LCH97_02570 PF07670 Nucleoside recognition LCH97_02585 PF03466 LysR substrate binding domain LCH97_02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02600 PF02566 OsmC-like protein LCH97_02605 PF01047 MarR family LCH97_02620 PF12833 Helix-turn-helix domain LCH97_02620 PF12852 Cupin LCH97_02640 PF07690 Major Facilitator Superfamily LCH97_02650 PF03466 LysR substrate binding domain LCH97_02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCH97_02655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCH97_02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02660 PF03466 LysR substrate binding domain LCH97_02665 PF02595 Glycerate kinase family LCH97_02675 PF03707 Bacterial signalling protein N terminal repeat LCH97_02675 PF00563 EAL domain LCH97_02675 PF00990 Diguanylate cyclase, GGDEF domain LCH97_02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02685 PF03466 LysR substrate binding domain LCH97_02690 PF13416 Bacterial extracellular solute-binding protein LCH97_02695 PF00850 Histone deacetylase domain LCH97_02705 PF07690 Major Facilitator Superfamily LCH97_02710 PF12793 Sugar transport-related sRNA regulator N-term LCH97_02710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_02720 PF03466 LysR substrate binding domain LCH97_02725 PF04303 PrpF protein LCH97_02730 PF00330 Aconitase family (aconitate hydratase) LCH97_02730 PF00694 Aconitase C-terminal domain LCH97_02735 PF00285 Citrate synthase, C-terminal domain LCH97_02745 PF08281 Sigma-70, region 4 LCH97_02745 PF04542 Sigma-70 region 2 LCH97_02765 PF13180 PDZ domain LCH97_02775 PF00679 Elongation factor G C-terminus LCH97_02775 PF00009 Elongation factor Tu GTP binding domain LCH97_02775 PF03144 Elongation factor Tu domain 2 LCH97_02775 PF06421 GTP-binding protein LepA C-terminus LCH97_02780 PF10502 Signal peptidase, peptidase S26 LCH97_02790 PF00035 Double-stranded RNA binding motif LCH97_02790 PF14622 Ribonuclease-III-like LCH97_02795 PF07650 KH domain LCH97_02795 PF01926 50S ribosome-binding GTPase LCH97_02800 PF03992 Antibiotic biosynthesis monooxygenase LCH97_02805 PF11967 Recombination protein O N terminal LCH97_02805 PF02565 Recombination protein O C terminal LCH97_02810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LCH97_02815 PF01648 4'-phosphopantetheinyl transferase superfamily LCH97_02820 PF00933 Glycosyl hydrolase family 3 N terminal domain LCH97_02825 PF00672 HAMP domain LCH97_02825 PF02743 Cache domain LCH97_02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_02845 PF00990 Diguanylate cyclase, GGDEF domain LCH97_02875 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_02875 PF00589 Phage integrase family LCH97_02885 PF13185 GAF domain LCH97_02890 PF00106 short chain dehydrogenase LCH97_02895 PF03193 RsgA GTPase LCH97_02900 PF01329 Pterin 4 alpha carbinolamine dehydratase LCH97_02905 PF01435 Peptidase family M48 LCH97_02910 PF00929 Exonuclease LCH97_02915 PF00342 Phosphoglucose isomerase LCH97_02920 PF02464 Competence-damaged protein LCH97_02920 PF00994 Probable molybdopterin binding domain LCH97_02925 PF02608 ABC transporter substrate-binding protein PnrA-like LCH97_02930 PF00005 ABC transporter LCH97_02935 PF02653 Branched-chain amino acid transport system / permease component LCH97_02940 PF02653 Branched-chain amino acid transport system / permease component LCH97_02945 PF00589 Phage integrase family LCH97_02945 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_02950 PF01434 Peptidase family M41 LCH97_02950 PF17862 AAA+ lid domain LCH97_02950 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_02965 PF00582 Universal stress protein family LCH97_02980 PF01546 Peptidase family M20/M25/M40 LCH97_02980 PF07687 Peptidase dimerisation domain LCH97_02985 PF00209 Sodium:neurotransmitter symporter family LCH97_03000 PF03480 Bacterial extracellular solute-binding protein, family 7 LCH97_03020 PF00877 NlpC/P60 family LCH97_03025 PF16326 ABC transporter C-terminal domain LCH97_03025 PF00005 ABC transporter LCH97_03025 PF12848 ABC transporter LCH97_03040 PF02875 Mur ligase family, glutamate ligase domain LCH97_03040 PF08245 Mur ligase middle domain LCH97_03055 PF02674 Colicin V production protein LCH97_03060 PF00156 Phosphoribosyl transferase domain LCH97_03065 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH97_03075 PF09317 Domain of unknown function (DUF1974) LCH97_03075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_03075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_03080 PF03061 Thioesterase superfamily LCH97_03085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LCH97_03090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCH97_03090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCH97_03090 PF00378 Enoyl-CoA hydratase/isomerase LCH97_03095 PF02803 Thiolase, C-terminal domain LCH97_03095 PF00108 Thiolase, N-terminal domain LCH97_03105 PF00561 alpha/beta hydrolase fold LCH97_03110 PF03280 Proteobacterial lipase chaperone protein LCH97_03115 PF00218 Indole-3-glycerol phosphate synthase LCH97_03120 PF00561 alpha/beta hydrolase fold LCH97_03125 PF00994 Probable molybdopterin binding domain LCH97_03130 PF04751 Protein of unknown function (DUF615) LCH97_03135 PF01523 Putative modulator of DNA gyrase LCH97_03140 PF06029 AlkA N-terminal domain LCH97_03140 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH97_03150 PF02600 Disulfide bond formation protein DsbB LCH97_03235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LCH97_03240 PF11734 TilS substrate C-terminal domain LCH97_03240 PF09179 TilS substrate binding domain LCH97_03240 PF01171 PP-loop family LCH97_03245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCH97_03250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_03250 PF03466 LysR substrate binding domain LCH97_03280 PF13737 Transposase DDE domain LCH97_03300 PF13737 Transposase DDE domain LCH97_03320 PF00248 Aldo/keto reductase family LCH97_03325 PF05368 NmrA-like family LCH97_03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_03330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH97_03335 PF00106 short chain dehydrogenase LCH97_03340 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_03340 PF00107 Zinc-binding dehydrogenase LCH97_03345 PF00561 alpha/beta hydrolase fold LCH97_03375 PF00672 HAMP domain LCH97_03375 PF00512 His Kinase A (phospho-acceptor) domain LCH97_03375 PF01627 Hpt domain LCH97_03375 PF00072 Response regulator receiver domain LCH97_03375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH97_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_03385 PF00072 Response regulator receiver domain LCH97_03390 PF00005 ABC transporter LCH97_03390 PF09383 NIL domain LCH97_03395 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_03400 PF03180 NLPA lipoprotein LCH97_03405 PF00117 Glutamine amidotransferase class-I LCH97_03410 PF02885 Glycosyl transferase family, helical bundle domain LCH97_03410 PF00591 Glycosyl transferase family, a/b domain LCH97_03415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCH97_03415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCH97_03415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCH97_03415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCH97_03420 PF05175 Methyltransferase small domain LCH97_03425 PF00557 Metallopeptidase family M24 LCH97_03440 PF06733 DEAD_2 LCH97_03440 PF13307 Helicase C-terminal domain LCH97_03445 PF01276 Orn/Lys/Arg decarboxylase, major domain LCH97_03445 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LCH97_03445 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LCH97_03450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH97_03450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH97_03455 PF00764 Arginosuccinate synthase LCH97_03470 PF04461 Protein of unknown function (DUF520) LCH97_03475 PF02798 Glutathione S-transferase, N-terminal domain LCH97_03480 PF00990 Diguanylate cyclase, GGDEF domain LCH97_03485 PF12792 CSS motif domain associated with EAL LCH97_03485 PF00563 EAL domain LCH97_03490 PF17954 Quercetinase C-terminal cupin domain LCH97_03490 PF02678 Pirin LCH97_03495 PF04055 Radical SAM superfamily LCH97_03500 PF11871 Domain of unknown function (DUF3391) LCH97_03500 PF01966 HD domain LCH97_03505 PF08447 PAS fold LCH97_03505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_03510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_03510 PF00672 HAMP domain LCH97_03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_03520 PF08447 PAS fold LCH97_03520 PF13426 PAS domain LCH97_03525 PF00892 EamA-like transporter family LCH97_03545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH97_03550 PF13426 PAS domain LCH97_03550 PF08447 PAS fold LCH97_03550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_03555 PF08269 Cache domain LCH97_03555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_03570 PF00873 AcrB/AcrD/AcrF family LCH97_03580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LCH97_03580 PF12833 Helix-turn-helix domain LCH97_03585 PF00850 Histone deacetylase domain LCH97_03590 PF01037 Lrp/AsnC ligand binding domain LCH97_03600 PF00268 Ribonucleotide reductase, small chain LCH97_03610 PF03477 ATP cone domain LCH97_03610 PF02867 Ribonucleotide reductase, barrel domain LCH97_03610 PF00317 Ribonucleotide reductase, all-alpha domain LCH97_03620 PF02578 Multi-copper polyphenol oxidoreductase laccase LCH97_03635 PF13525 Outer membrane lipoprotein LCH97_03640 PF00543 Nitrogen regulatory protein P-II LCH97_03645 PF02769 AIR synthase related protein, C-terminal domain LCH97_03645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LCH97_03645 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LCH97_03655 PF01027 Inhibitor of apoptosis-promoting Bax1 LCH97_03660 PF02646 RmuC family LCH97_03715 PF13737 Transposase DDE domain LCH97_03740 PF02272 DHHA1 domain LCH97_03740 PF17768 RecJ OB domain LCH97_03740 PF01368 DHH family LCH97_03750 PF01476 LysM domain LCH97_03750 PF08525 Opacity-associated protein A N-terminal motif LCH97_03750 PF01551 Peptidase family M23 LCH97_03755 PF03702 Anhydro-N-acetylmuramic acid kinase LCH97_03760 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LCH97_03760 PF17854 FtsK alpha domain LCH97_03760 PF09397 Ftsk gamma domain LCH97_03760 PF01580 FtsK/SpoIIIE family LCH97_03765 PF00762 Ferrochelatase LCH97_03770 PF13458 Periplasmic binding protein LCH97_03775 PF13458 Periplasmic binding protein LCH97_03780 PF02666 Phosphatidylserine decarboxylase LCH97_03785 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_03785 PF00107 Zinc-binding dehydrogenase LCH97_03790 PF03992 Antibiotic biosynthesis monooxygenase LCH97_03795 PF03466 LysR substrate binding domain LCH97_03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_03815 PF13476 AAA domain LCH97_03820 PF00149 Calcineurin-like phosphoesterase LCH97_03820 PF12320 Type 5 capsule protein repressor C-terminal domain LCH97_03825 PF01207 Dihydrouridine synthase (Dus) LCH97_03840 PF00850 Histone deacetylase domain LCH97_03845 PF01625 Peptide methionine sulfoxide reductase LCH97_03850 PF08447 PAS fold LCH97_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_03850 PF00512 His Kinase A (phospho-acceptor) domain LCH97_03850 PF00989 PAS fold LCH97_03850 PF13426 PAS domain LCH97_03850 PF13493 Domain of unknown function (DUF4118) LCH97_03855 PF00196 Bacterial regulatory proteins, luxR family LCH97_03855 PF00072 Response regulator receiver domain LCH97_03860 PF01513 ATP-NAD kinase LCH97_03865 PF02463 RecF/RecN/SMC N terminal domain LCH97_03875 PF00202 Aminotransferase class-III LCH97_03880 PF00120 Glutamine synthetase, catalytic domain LCH97_03880 PF03951 Glutamine synthetase, beta-Grasp domain LCH97_03890 PF17151 Periplasmic sensor domain LCH97_03890 PF00990 Diguanylate cyclase, GGDEF domain LCH97_03895 PF00669 Bacterial flagellin N-terminal helical region LCH97_03895 PF00700 Bacterial flagellin C-terminal helical region LCH97_03915 PF03796 DnaB-like helicase C terminal domain LCH97_03915 PF00772 DnaB-like helicase N terminal domain LCH97_03925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCH97_03925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCH97_03930 PF05698 Bacterial trigger factor protein (TF) C-terminus LCH97_03935 PF00216 Bacterial DNA-binding protein LCH97_03940 PF02190 ATP-dependent protease La (LON) substrate-binding domain LCH97_03940 PF05362 Lon protease (S16) C-terminal proteolytic domain LCH97_03940 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_03945 PF07724 AAA domain (Cdc48 subfamily) LCH97_03945 PF06689 ClpX C4-type zinc finger LCH97_03945 PF10431 C-terminal, D2-small domain, of ClpB protein LCH97_03950 PF00574 Clp protease LCH97_03955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH97_03955 PF05698 Bacterial trigger factor protein (TF) C-terminus LCH97_03955 PF05697 Bacterial trigger factor protein (TF) LCH97_03960 PF01967 MoaC family LCH97_03965 PF01613 Flavin reductase like domain LCH97_03970 PF04851 Type III restriction enzyme, res subunit LCH97_03970 PF13307 Helicase C-terminal domain LCH97_03970 PF00929 Exonuclease LCH97_03990 PF03453 MoeA N-terminal region (domain I and II) LCH97_03990 PF00994 Probable molybdopterin binding domain LCH97_03990 PF03454 MoeA C-terminal region (domain IV) LCH97_04005 PF01351 Ribonuclease HII LCH97_04010 PF02684 Lipid-A-disaccharide synthetase LCH97_04015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LCH97_04015 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_04020 PF07977 FabA-like domain LCH97_04025 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_04025 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LCH97_04035 PF01103 Surface antigen LCH97_04035 PF07244 Surface antigen variable number repeat LCH97_04040 PF17820 PDZ domain LCH97_04040 PF02163 Peptidase family M50 LCH97_04045 PF13288 DXP reductoisomerase C-terminal domain LCH97_04045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LCH97_04045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LCH97_04055 PF01255 Putative undecaprenyl diphosphate synthase LCH97_04060 PF01765 Ribosome recycling factor LCH97_04065 PF00696 Amino acid kinase family LCH97_04070 PF00889 Elongation factor TS LCH97_04075 PF00318 Ribosomal protein S2 LCH97_04085 PF03060 Nitronate monooxygenase LCH97_04095 PF00293 NUDIX domain LCH97_04095 PF09297 NADH pyrophosphatase zinc ribbon domain LCH97_04100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_04100 PF13426 PAS domain LCH97_04100 PF08447 PAS fold LCH97_04115 PF13018 Extended Signal Peptide of Type V secretion system LCH97_04115 PF13332 Hemagglutinin repeat LCH97_04115 PF05860 haemagglutination activity domain LCH97_04115 PF04829 Pre-toxin domain with VENN motif LCH97_04125 PF08479 POTRA domain, ShlB-type LCH97_04125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LCH97_04125 PF17287 POTRA domain LCH97_04130 PF07687 Peptidase dimerisation domain LCH97_04130 PF01546 Peptidase family M20/M25/M40 LCH97_04135 PF00717 Peptidase S24-like LCH97_04140 PF13438 Domain of unknown function (DUF4113) LCH97_04140 PF00817 impB/mucB/samB family LCH97_04140 PF11799 impB/mucB/samB family C-terminal domain LCH97_04145 PF01266 FAD dependent oxidoreductase LCH97_04150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LCH97_04150 PF04055 Radical SAM superfamily LCH97_04155 PF03099 Biotin/lipoate A/B protein ligase family LCH97_04160 PF04359 Protein of unknown function (DUF493) LCH97_04165 PF07943 Penicillin-binding protein 5, C-terminal domain LCH97_04165 PF00768 D-alanyl-D-alanine carboxypeptidase LCH97_04170 PF00291 Pyridoxal-phosphate dependent enzyme LCH97_04170 PF00585 C-terminal regulatory domain of Threonine dehydratase LCH97_04175 PF13419 Haloacid dehalogenase-like hydrolase LCH97_04185 PF00990 Diguanylate cyclase, GGDEF domain LCH97_04190 PF00679 Elongation factor G C-terminus LCH97_04190 PF00009 Elongation factor Tu GTP binding domain LCH97_04190 PF03144 Elongation factor Tu domain 2 LCH97_04205 PF12167 Arm DNA-binding domain LCH97_04205 PF00589 Phage integrase family LCH97_04265 PF04381 Putative exonuclease, RdgC LCH97_04310 PF03120 NAD-dependent DNA ligase OB-fold domain LCH97_04310 PF12826 Helix-hairpin-helix motif LCH97_04310 PF00533 BRCA1 C Terminus (BRCT) domain LCH97_04310 PF01653 NAD-dependent DNA ligase adenylation domain LCH97_04310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCH97_04345 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA LCH97_04380 PF00772 DnaB-like helicase N terminal domain LCH97_04380 PF03796 DnaB-like helicase C terminal domain LCH97_04555 PF13356 Arm DNA-binding domain LCH97_04555 PF00589 Phage integrase family LCH97_04595 PF08463 EcoEI R protein C-terminal LCH97_04595 PF00271 Helicase conserved C-terminal domain LCH97_04595 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LCH97_04595 PF04851 Type III restriction enzyme, res subunit LCH97_04610 PF00224 Pyruvate kinase, barrel domain LCH97_04610 PF02887 Pyruvate kinase, alpha/beta domain LCH97_04620 PF01479 S4 domain LCH97_04620 PF00579 tRNA synthetases class I (W and Y) LCH97_04630 PF00550 Phosphopantetheine attachment site LCH97_04630 PF08659 KR domain LCH97_04630 PF00109 Beta-ketoacyl synthase, N-terminal domain LCH97_04630 PF16197 Ketoacyl-synthetase C-terminal extension LCH97_04630 PF02801 Beta-ketoacyl synthase, C-terminal domain LCH97_04630 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_04630 PF00698 Acyl transferase domain LCH97_04630 PF14765 Polyketide synthase dehydratase LCH97_04630 PF08990 Erythronolide synthase docking LCH97_04635 PF00403 Heavy-metal-associated domain LCH97_04645 PF00512 His Kinase A (phospho-acceptor) domain LCH97_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_04650 PF02080 TrkA-C domain LCH97_04650 PF02254 TrkA-N domain LCH97_04655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH97_04660 PF02386 Cation transport protein LCH97_04665 PF01551 Peptidase family M23 LCH97_04665 PF10145 Phage-related minor tail protein LCH97_04665 PF01464 Transglycosylase SLT domain LCH97_04670 PF13460 NAD(P)H-binding LCH97_04675 PF01966 HD domain LCH97_04675 PF12627 Probable RNA and SrmB- binding site of polymerase A LCH97_04675 PF01743 Poly A polymerase head domain LCH97_04680 PF04303 PrpF protein LCH97_04690 PF00990 Diguanylate cyclase, GGDEF domain LCH97_04690 PF00563 EAL domain LCH97_04690 PF03707 Bacterial signalling protein N terminal repeat LCH97_04695 PF01923 Cobalamin adenosyltransferase LCH97_04710 PF00883 Cytosol aminopeptidase family, catalytic domain LCH97_04710 PF02789 Cytosol aminopeptidase family, N-terminal domain LCH97_04715 PF03739 Lipopolysaccharide export system permease LptF/LptG LCH97_04725 PF01842 ACT domain LCH97_04725 PF08335 GlnD PII-uridylyltransferase LCH97_04725 PF01966 HD domain LCH97_04725 PF01909 Nucleotidyltransferase domain LCH97_04730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_04730 PF08447 PAS fold LCH97_04740 PF00478 IMP dehydrogenase / GMP reductase domain LCH97_04750 PF13419 Haloacid dehalogenase-like hydrolase LCH97_04760 PF04279 Intracellular septation protein A LCH97_04765 PF03795 YCII-related domain LCH97_04770 PF01722 BolA-like protein LCH97_04785 PF00378 Enoyl-CoA hydratase/isomerase LCH97_04795 PF01297 Zinc-uptake complex component A periplasmic LCH97_04800 PF00950 ABC 3 transport family LCH97_04805 PF00005 ABC transporter LCH97_04815 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCH97_04815 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCH97_04820 PF01475 Ferric uptake regulator family LCH97_04825 PF01322 Cytochrome C' LCH97_04850 PF07690 Major Facilitator Superfamily LCH97_04855 PF01966 HD domain LCH97_04865 PF00300 Histidine phosphatase superfamily (branch 1) LCH97_04870 PF01641 SelR domain LCH97_04875 PF01047 MarR family LCH97_04880 PF04107 Glutamate-cysteine ligase family 2(GCS2) LCH97_04885 PF01523 Putative modulator of DNA gyrase LCH97_04890 PF00795 Carbon-nitrogen hydrolase LCH97_04900 PF08335 GlnD PII-uridylyltransferase LCH97_04900 PF03710 Glutamate-ammonia ligase adenylyltransferase LCH97_04905 PF01063 Amino-transferase class IV LCH97_04915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH97_04920 PF17932 Tetracyclin repressor-like, C-terminal domain LCH97_04920 PF00440 Bacterial regulatory proteins, tetR family LCH97_04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_04945 PF01713 Smr domain LCH97_04950 PF00578 AhpC/TSA family LCH97_04955 PF02562 PhoH-like protein LCH97_04955 PF13638 PIN domain LCH97_04965 PF05661 Protein of unknown function (DUF808) LCH97_04970 PF00012 Hsp70 protein LCH97_04980 PF13545 Crp-like helix-turn-helix domain LCH97_04980 PF00027 Cyclic nucleotide-binding domain LCH97_04985 PF07885 Ion channel LCH97_04985 PF02254 TrkA-N domain LCH97_04990 PF06865 Pyrimidine/purine nucleoside phosphorylase LCH97_04995 PF01966 HD domain LCH97_04995 PF00672 HAMP domain LCH97_05000 PF00313 'Cold-shock' DNA-binding domain LCH97_05020 PF00512 His Kinase A (phospho-acceptor) domain LCH97_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_05025 PF00158 Sigma-54 interaction domain LCH97_05025 PF00072 Response regulator receiver domain LCH97_05025 PF02954 Bacterial regulatory protein, Fis family LCH97_05030 PF01568 Molydopterin dinucleotide binding domain LCH97_05030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCH97_05030 PF00384 Molybdopterin oxidoreductase LCH97_05035 PF13247 4Fe-4S dicluster domain LCH97_05035 PF09163 Formate dehydrogenase N, transmembrane LCH97_05035 PF12800 4Fe-4S binding domain LCH97_05040 PF01292 Prokaryotic cytochrome b561 LCH97_05045 PF02634 FdhD/NarQ family LCH97_05050 PF04216 Protein involved in formate dehydrogenase formation LCH97_05055 PF00583 Acetyltransferase (GNAT) family LCH97_05060 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCH97_05060 PF00588 SpoU rRNA Methylase family LCH97_05075 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCH97_05075 PF00691 OmpA family LCH97_05080 PF00202 Aminotransferase class-III LCH97_05085 PF00120 Glutamine synthetase, catalytic domain LCH97_05090 PF07722 Peptidase C26 LCH97_05095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCH97_05095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCH97_05100 PF07883 Cupin domain LCH97_05100 PF01381 Helix-turn-helix LCH97_05105 PF00171 Aldehyde dehydrogenase family LCH97_05110 PF06463 Molybdenum Cofactor Synthesis C LCH97_05110 PF04055 Radical SAM superfamily LCH97_05115 PF12804 MobA-like NTP transferase domain LCH97_05120 PF00849 RNA pseudouridylate synthase LCH97_05140 PF00717 Peptidase S24-like LCH97_05155 PF07690 Major Facilitator Superfamily LCH97_05160 PF00990 Diguanylate cyclase, GGDEF domain LCH97_05160 PF03707 Bacterial signalling protein N terminal repeat LCH97_05160 PF00563 EAL domain LCH97_05165 PF02391 MoaE protein LCH97_05175 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LCH97_05180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCH97_05185 PF00378 Enoyl-CoA hydratase/isomerase LCH97_05200 PF01678 Diaminopimelate epimerase LCH97_05220 PF18152 DAHP synthase ferredoxin-like domain LCH97_05220 PF00793 DAHP synthetase I family LCH97_05225 PF03641 Possible lysine decarboxylase LCH97_05230 PF01817 Chorismate mutase type II LCH97_05230 PF01842 ACT domain LCH97_05230 PF00800 Prephenate dehydratase LCH97_05245 PF00266 Aminotransferase class-V LCH97_05260 PF03989 DNA gyrase C-terminal domain, beta-propeller LCH97_05260 PF00521 DNA gyrase/topoisomerase IV, subunit A LCH97_05265 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_05270 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_05285 PF00664 ABC transporter transmembrane region LCH97_05285 PF00005 ABC transporter LCH97_05290 PF04379 ApaG domain LCH97_05295 PF00834 Ribulose-phosphate 3 epimerase family LCH97_05300 PF00106 short chain dehydrogenase LCH97_05310 PF13419 Haloacid dehalogenase-like hydrolase LCH97_05315 PF04715 Anthranilate synthase component I, N terminal region LCH97_05315 PF00425 chorismate binding enzyme LCH97_05320 PF03707 Bacterial signalling protein N terminal repeat LCH97_05320 PF00990 Diguanylate cyclase, GGDEF domain LCH97_05320 PF00563 EAL domain LCH97_05345 PF01032 FecCD transport family LCH97_05350 PF00005 ABC transporter LCH97_05355 PF12557 Cob(I)alamin adenosyltransferase N terminal LCH97_05355 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LCH97_05360 PF07685 CobB/CobQ-like glutamine amidotransferase domain LCH97_05360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCH97_05365 PF17113 Regulatory signalling modulator protein AmpE LCH97_05365 PF03186 CobD/Cbib protein LCH97_05370 PF00155 Aminotransferase class I and II LCH97_05375 PF01497 Periplasmic binding protein LCH97_05380 PF01497 Periplasmic binding protein LCH97_05385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCH97_05385 PF07685 CobB/CobQ-like glutamine amidotransferase domain LCH97_05410 PF00990 Diguanylate cyclase, GGDEF domain LCH97_05430 PF13737 Transposase DDE domain LCH97_05440 PF00330 Aconitase family (aconitate hydratase) LCH97_05440 PF06434 Aconitate hydratase 2 N-terminus LCH97_05440 PF11791 Aconitate B N-terminal domain LCH97_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_05445 PF03466 LysR substrate binding domain LCH97_05450 PF00072 Response regulator receiver domain LCH97_05460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCH97_05460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCH97_05465 PF01261 Xylose isomerase-like TIM barrel LCH97_05470 PF00270 DEAD/DEAH box helicase LCH97_05470 PF00271 Helicase conserved C-terminal domain LCH97_05475 PF04608 Phosphatidylglycerophosphatase A LCH97_05480 PF02769 AIR synthase related protein, C-terminal domain LCH97_05480 PF00586 AIR synthase related protein, N-terminal domain LCH97_05485 PF01029 NusB family LCH97_05490 PF00885 6,7-dimethyl-8-ribityllumazine synthase LCH97_05495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCH97_05495 PF00925 GTP cyclohydrolase II LCH97_05500 PF00677 Lumazine binding domain LCH97_05505 PF00009 Elongation factor Tu GTP binding domain LCH97_05505 PF03144 Elongation factor Tu domain 2 LCH97_05505 PF16658 Class II release factor RF3, C-terminal domain LCH97_05520 PF00356 Bacterial regulatory proteins, lacI family LCH97_05525 PF02896 PEP-utilising enzyme, TIM barrel domain LCH97_05525 PF00381 PTS HPr component phosphorylation site LCH97_05525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH97_05525 PF05524 PEP-utilising enzyme, N-terminal LCH97_05525 PF00391 PEP-utilising enzyme, mobile domain LCH97_05530 PF00294 pfkB family carbohydrate kinase LCH97_05535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCH97_05550 PF00563 EAL domain LCH97_05550 PF00990 Diguanylate cyclase, GGDEF domain LCH97_05550 PF03707 Bacterial signalling protein N terminal repeat LCH97_05555 PF02954 Bacterial regulatory protein, Fis family LCH97_05555 PF00072 Response regulator receiver domain LCH97_05555 PF00158 Sigma-54 interaction domain LCH97_05560 PF02743 Cache domain LCH97_05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_05560 PF00512 His Kinase A (phospho-acceptor) domain LCH97_05575 PF03692 Putative zinc- or iron-chelating domain LCH97_05590 PF00155 Aminotransferase class I and II LCH97_05600 PF05962 HutD LCH97_05610 PF06299 Protein of unknown function (DUF1045) LCH97_05630 PF01048 Phosphorylase superfamily LCH97_05635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_05635 PF13192 Thioredoxin domain LCH97_05640 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCH97_05640 PF00578 AhpC/TSA family LCH97_05655 PF10431 C-terminal, D2-small domain, of ClpB protein LCH97_05655 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_05655 PF07724 AAA domain (Cdc48 subfamily) LCH97_05655 PF17871 AAA lid domain LCH97_05655 PF02861 Clp amino terminal domain, pathogenicity island component LCH97_05665 PF01266 FAD dependent oxidoreductase LCH97_05665 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LCH97_05675 PF00265 Thymidine kinase LCH97_05685 PF13737 Transposase DDE domain LCH97_05690 PF03527 RHS protein LCH97_05700 PF00962 Adenosine/AMP deaminase LCH97_05715 PF02540 NAD synthase LCH97_05715 PF00795 Carbon-nitrogen hydrolase LCH97_05720 PF03548 Outer membrane lipoprotein carrier protein LolA LCH97_05725 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_05725 PF16193 AAA C-terminal domain LCH97_05725 PF12002 MgsA AAA+ ATPase C terminal LCH97_05730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH97_05730 PF02403 Seryl-tRNA synthetase N-terminal domain LCH97_05735 PF00990 Diguanylate cyclase, GGDEF domain LCH97_05735 PF00563 EAL domain LCH97_05735 PF03707 Bacterial signalling protein N terminal repeat LCH97_05745 PF11898 Domain of unknown function (DUF3418) LCH97_05745 PF04408 Helicase associated domain (HA2) LCH97_05745 PF00271 Helicase conserved C-terminal domain LCH97_05745 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LCH97_05745 PF00270 DEAD/DEAH box helicase LCH97_05750 PF11849 Domain of unknown function (DUF3369) LCH97_05755 PF00072 Response regulator receiver domain LCH97_05760 PF00849 RNA pseudouridylate synthase LCH97_05760 PF01479 S4 domain LCH97_05765 PF00669 Bacterial flagellin N-terminal helical region LCH97_05770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH97_05770 PF00460 Flagella basal body rod protein LCH97_05780 PF02119 Flagellar P-ring protein LCH97_05785 PF02107 Flagellar L-ring protein LCH97_05790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH97_05790 PF00460 Flagella basal body rod protein LCH97_05795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH97_05795 PF00460 Flagella basal body rod protein LCH97_05800 PF07559 Flagellar basal body protein FlaE LCH97_05800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH97_05800 PF00460 Flagella basal body rod protein LCH97_05805 PF03963 Flagellar hook capping protein - N-terminal region LCH97_05805 PF13860 FlgD Ig-like domain LCH97_05805 PF13861 FlgD Tudor-like domain LCH97_05810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCH97_05810 PF00460 Flagella basal body rod protein LCH97_05815 PF00460 Flagella basal body rod protein LCH97_05820 PF02566 OsmC-like protein LCH97_05825 PF00814 Glycoprotease family LCH97_05830 PF12848 ABC transporter LCH97_05830 PF00005 ABC transporter LCH97_05840 PF08220 DeoR-like helix-turn-helix domain LCH97_05840 PF00455 DeoR C terminal sensor domain LCH97_05845 PF00919 Uncharacterized protein family UPF0004 LCH97_05845 PF18693 TRAM domain LCH97_05845 PF04055 Radical SAM superfamily LCH97_05850 PF07879 PHB/PHA accumulation regulator DNA-binding domain LCH97_05850 PF05233 PHB accumulation regulatory domain LCH97_05860 PF18027 Cytosolic carboxypeptidase N-terminal domain LCH97_05860 PF00246 Zinc carboxypeptidase LCH97_05890 PF03466 LysR substrate binding domain LCH97_05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_05895 PF04341 Protein of unknown function, DUF485 LCH97_05900 PF00474 Sodium:solute symporter family LCH97_05905 PF13193 AMP-binding enzyme C-terminal domain LCH97_05905 PF16177 Acetyl-coenzyme A synthetase N-terminus LCH97_05905 PF00501 AMP-binding enzyme LCH97_05910 PF02508 Rnf-Nqr subunit, membrane protein LCH97_05915 PF04060 Putative Fe-S cluster LCH97_05920 PF10531 SLBB domain LCH97_05920 PF13375 RnfC Barrel sandwich hybrid domain LCH97_05920 PF13237 4Fe-4S dicluster domain LCH97_05920 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCH97_05925 PF03116 NQR2, RnfD, RnfE family LCH97_05930 PF04205 FMN-binding domain LCH97_05935 PF02508 Rnf-Nqr subunit, membrane protein LCH97_05940 PF10576 Iron-sulfur binding domain of endonuclease III LCH97_05940 PF00633 Helix-hairpin-helix motif LCH97_05940 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH97_05945 PF13180 PDZ domain LCH97_05950 PF03737 Aldolase/RraA LCH97_05960 PF02261 Aspartate decarboxylase LCH97_05965 PF02569 Pantoate-beta-alanine ligase LCH97_05970 PF02548 Ketopantoate hydroxymethyltransferase LCH97_05980 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCH97_05985 PF12627 Probable RNA and SrmB- binding site of polymerase A LCH97_05985 PF12626 Polymerase A arginine-rich C-terminus LCH97_05985 PF01743 Poly A polymerase head domain LCH97_05995 PF01554 MatE LCH97_06000 PF01565 FAD binding domain LCH97_06000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LCH97_06015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LCH97_06015 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LCH97_06020 PF00293 NUDIX domain LCH97_06025 PF03458 UPF0126 domain LCH97_06030 PF07498 Rho termination factor, N-terminal domain LCH97_06030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH97_06030 PF07497 Rho termination factor, RNA-binding domain LCH97_06035 PF00085 Thioredoxin LCH97_06075 PF00890 FAD binding domain LCH97_06075 PF02910 Fumarate reductase flavoprotein C-term LCH97_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06080 PF00989 PAS fold LCH97_06080 PF00512 His Kinase A (phospho-acceptor) domain LCH97_06085 PF03480 Bacterial extracellular solute-binding protein, family 7 LCH97_06090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LCH97_06095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LCH97_06100 PF00390 Malic enzyme, N-terminal domain LCH97_06100 PF03949 Malic enzyme, NAD binding domain LCH97_06100 PF01515 Phosphate acetyl/butaryl transferase LCH97_06110 PF02811 PHP domain LCH97_06110 PF01336 OB-fold nucleic acid binding domain LCH97_06110 PF14579 Helix-hairpin-helix motif LCH97_06110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCH97_06110 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCH97_06140 PF01740 STAS domain LCH97_06140 PF00916 Sulfate permease family LCH97_06145 PF03976 Polyphosphate kinase 2 (PPK2) LCH97_06150 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LCH97_06150 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH97_06155 PF02872 5'-nucleotidase, C-terminal domain LCH97_06155 PF00149 Calcineurin-like phosphoesterase LCH97_06160 PF01738 Dienelactone hydrolase family LCH97_06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_06165 PF00672 HAMP domain LCH97_06165 PF12729 Four helix bundle sensory module for signal transduction LCH97_06175 PF04389 Peptidase family M28 LCH97_06180 PF06736 Protein of unknown function (DUF1211) LCH97_06200 PF00892 EamA-like transporter family LCH97_06235 PF00925 GTP cyclohydrolase II LCH97_06250 PF00072 Response regulator receiver domain LCH97_06250 PF00486 Transcriptional regulatory protein, C terminal LCH97_06255 PF00990 Diguanylate cyclase, GGDEF domain LCH97_06255 PF03707 Bacterial signalling protein N terminal repeat LCH97_06255 PF00563 EAL domain LCH97_06260 PF00512 His Kinase A (phospho-acceptor) domain LCH97_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06265 PF00990 Diguanylate cyclase, GGDEF domain LCH97_06270 PF01168 Alanine racemase, N-terminal domain LCH97_06270 PF00842 Alanine racemase, C-terminal domain LCH97_06275 PF01266 FAD dependent oxidoreductase LCH97_06280 PF01037 Lrp/AsnC ligand binding domain LCH97_06290 PF00909 Ammonium Transporter Family LCH97_06300 PF00593 TonB dependent receptor LCH97_06300 PF07715 TonB-dependent Receptor Plug Domain LCH97_06305 PF05171 Haemin-degrading HemS.ChuX domain LCH97_06315 PF01032 FecCD transport family LCH97_06320 PF00005 ABC transporter LCH97_06325 PF00557 Metallopeptidase family M24 LCH97_06335 PF12729 Four helix bundle sensory module for signal transduction LCH97_06335 PF00672 HAMP domain LCH97_06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_06340 PF04073 Aminoacyl-tRNA editing domain LCH97_06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_06345 PF12729 Four helix bundle sensory module for signal transduction LCH97_06345 PF00672 HAMP domain LCH97_06350 PF13580 SIS domain LCH97_06355 PF00005 ABC transporter LCH97_06355 PF08402 TOBE domain LCH97_06360 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06380 PF10119 Predicted methyltransferase regulatory domain LCH97_06380 PF13847 Methyltransferase domain LCH97_06405 PF00005 ABC transporter LCH97_06405 PF08402 TOBE domain LCH97_06410 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06415 PF00266 Aminotransferase class-V LCH97_06425 PF01266 FAD dependent oxidoreductase LCH97_06430 PF00565 Staphylococcal nuclease homologue LCH97_06465 PF00486 Transcriptional regulatory protein, C terminal LCH97_06465 PF00072 Response regulator receiver domain LCH97_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06470 PF00512 His Kinase A (phospho-acceptor) domain LCH97_06470 PF08521 Two-component sensor kinase N-terminal LCH97_06475 PF01253 Translation initiation factor SUI1 LCH97_06480 PF07859 alpha/beta hydrolase fold LCH97_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_06485 PF03466 LysR substrate binding domain LCH97_06490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH97_06495 PF00881 Nitroreductase family LCH97_06535 PF13737 Transposase DDE domain LCH97_06550 PF13737 Transposase DDE domain LCH97_06555 PF05840 Bacteriophage replication gene A protein (GPA) LCH97_06575 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_06575 PF00589 Phage integrase family LCH97_06585 PF02803 Thiolase, C-terminal domain LCH97_06585 PF00108 Thiolase, N-terminal domain LCH97_06590 PF02082 Transcriptional regulator LCH97_06595 PF00175 Oxidoreductase NAD-binding domain LCH97_06595 PF00970 Oxidoreductase FAD-binding domain LCH97_06595 PF00042 Globin LCH97_06630 PF01066 CDP-alcohol phosphatidyltransferase LCH97_06635 PF01541 GIY-YIG catalytic domain LCH97_06635 PF02151 UvrB/uvrC motif LCH97_06635 PF08459 UvrC Helix-hairpin-helix N-terminal LCH97_06645 PF00571 CBS domain LCH97_06645 PF00478 IMP dehydrogenase / GMP reductase domain LCH97_06655 PF00561 alpha/beta hydrolase fold LCH97_06660 PF00155 Aminotransferase class I and II LCH97_06670 PF01430 Hsp33 protein LCH97_06680 PF13230 Glutamine amidotransferases class-II LCH97_06705 PF04002 RadC-like JAB domain LCH97_06710 PF04127 DNA / pantothenate metabolism flavoprotein LCH97_06710 PF02441 Flavoprotein LCH97_06715 PF00692 dUTPase LCH97_06720 PF00990 Diguanylate cyclase, GGDEF domain LCH97_06725 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06730 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06740 PF00005 ABC transporter LCH97_06740 PF08402 TOBE domain LCH97_06745 PF05088 Bacterial NAD-glutamate dehydrogenase LCH97_06750 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_06755 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_06760 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06765 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_06775 PF00005 ABC transporter LCH97_06780 PF12833 Helix-turn-helix domain LCH97_06785 PF01047 MarR family LCH97_06790 PF01292 Prokaryotic cytochrome b561 LCH97_06795 PF04264 YceI-like domain LCH97_06800 PF04264 YceI-like domain LCH97_06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06805 PF00512 His Kinase A (phospho-acceptor) domain LCH97_06805 PF00989 PAS fold LCH97_06805 PF11808 Phosphate regulon sensor protein PhoR LCH97_06810 PF13185 GAF domain LCH97_06810 PF00990 Diguanylate cyclase, GGDEF domain LCH97_06810 PF00563 EAL domain LCH97_06815 PF00512 His Kinase A (phospho-acceptor) domain LCH97_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06815 PF00672 HAMP domain LCH97_06830 PF01750 Hydrogenase maturation protease LCH97_06845 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LCH97_06850 PF00301 Rubredoxin LCH97_06855 PF00301 Rubredoxin LCH97_06855 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE LCH97_06865 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LCH97_06875 PF01300 Telomere recombination LCH97_06875 PF17788 HypF Kae1-like domain LCH97_06875 PF00708 Acylphosphatase LCH97_06875 PF07503 HypF finger LCH97_06880 PF01455 HupF/HypC family LCH97_06885 PF01924 Hydrogenase formation hypA family LCH97_06890 PF00586 AIR synthase related protein, N-terminal domain LCH97_06890 PF02769 AIR synthase related protein, C-terminal domain LCH97_06895 PF00158 Sigma-54 interaction domain LCH97_06895 PF02954 Bacterial regulatory protein, Fis family LCH97_06895 PF00072 Response regulator receiver domain LCH97_06900 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LCH97_06900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCH97_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_06910 PF08447 PAS fold LCH97_06910 PF08448 PAS fold LCH97_06920 PF04955 HupE / UreJ protein LCH97_06930 PF00374 Nickel-dependent hydrogenase LCH97_06935 PF01292 Prokaryotic cytochrome b561 LCH97_06940 PF01381 Helix-turn-helix LCH97_06955 PF01476 LysM domain LCH97_06955 PF03734 L,D-transpeptidase catalytic domain LCH97_06960 PF05958 tRNA (Uracil-5-)-methyltransferase LCH97_07000 PF05958 tRNA (Uracil-5-)-methyltransferase LCH97_07005 PF05567 Neisseria PilC beta-propeller domain LCH97_07010 PF05567 Neisseria PilC beta-propeller domain LCH97_07015 PF05567 Neisseria PilC beta-propeller domain LCH97_07160 PF04233 Phage Mu protein F like protein LCH97_07170 PF03237 Terminase-like family LCH97_07200 PF01510 N-acetylmuramoyl-L-alanine amidase LCH97_07210 PF13737 Transposase DDE domain LCH97_07215 PF05567 Neisseria PilC beta-propeller domain LCH97_07220 PF00920 Dehydratase family LCH97_07225 PF01790 Prolipoprotein diacylglyceryl transferase LCH97_07235 PF01037 Lrp/AsnC ligand binding domain LCH97_07245 PF03466 LysR substrate binding domain LCH97_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_07250 PF03601 Conserved hypothetical protein 698 LCH97_07260 PF00403 Heavy-metal-associated domain LCH97_07265 PF01544 CorA-like Mg2+ transporter protein LCH97_07270 PF02541 Ppx/GppA phosphatase family LCH97_07275 PF01895 PhoU domain LCH97_07280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCH97_07285 PF02542 YgbB family LCH97_07290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LCH97_07295 PF00929 Exonuclease LCH97_07300 PF00075 RNase H LCH97_07305 PF08241 Methyltransferase domain LCH97_07310 PF00753 Metallo-beta-lactamase superfamily LCH97_07310 PF16123 Hydroxyacylglutathione hydrolase C-terminus LCH97_07315 PF01476 LysM domain LCH97_07315 PF01464 Transglycosylase SLT domain LCH97_07320 PF00709 Adenylosuccinate synthetase LCH97_07325 PF13393 Histidyl-tRNA synthetase LCH97_07330 PF01145 SPFH domain / Band 7 family LCH97_07335 PF01145 SPFH domain / Band 7 family LCH97_07335 PF12221 Bacterial membrane protein N terminal LCH97_07340 PF13167 GTP-binding GTPase N-terminal LCH97_07340 PF16360 GTP-binding GTPase Middle Region LCH97_07340 PF01926 50S ribosome-binding GTPase LCH97_07345 PF17209 Hfq protein LCH97_07350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LCH97_07350 PF01926 50S ribosome-binding GTPase LCH97_07355 PF13360 PQQ-like domain LCH97_07365 PF03129 Anticodon binding domain LCH97_07365 PF13393 Histidyl-tRNA synthetase LCH97_07370 PF04551 GcpE protein LCH97_07375 PF13464 Domain of unknown function (DUF4115) LCH97_07385 PF04055 Radical SAM superfamily LCH97_07390 PF00334 Nucleoside diphosphate kinase LCH97_07400 PF03969 AFG1-like ATPase LCH97_07405 PF00291 Pyridoxal-phosphate dependent enzyme LCH97_07415 PF00464 Serine hydroxymethyltransferase LCH97_07425 PF00929 Exonuclease LCH97_07425 PF08411 Exonuclease C-terminal LCH97_07430 PF01925 Sulfite exporter TauE/SafE LCH97_07440 PF01047 MarR family LCH97_07450 PF00529 HlyD membrane-fusion protein of T1SS LCH97_07450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH97_07455 PF07690 Major Facilitator Superfamily LCH97_07460 PF01042 Endoribonuclease L-PSP LCH97_07475 PF00210 Ferritin-like domain LCH97_07480 PF04324 BFD-like [2Fe-2S] binding domain LCH97_07485 PF00293 NUDIX domain LCH97_07505 PF03358 NADPH-dependent FMN reductase LCH97_07515 PF07690 Major Facilitator Superfamily LCH97_07520 PF03466 LysR substrate binding domain LCH97_07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_07525 PF00465 Iron-containing alcohol dehydrogenase LCH97_07530 PF02867 Ribonucleotide reductase, barrel domain LCH97_07530 PF03477 ATP cone domain LCH97_07530 PF00317 Ribonucleotide reductase, all-alpha domain LCH97_07535 PF00672 HAMP domain LCH97_07535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_07535 PF17200 Single Cache domain 2 LCH97_07545 PF00120 Glutamine synthetase, catalytic domain LCH97_07560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LCH97_07560 PF07730 Histidine kinase LCH97_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07560 PF00672 HAMP domain LCH97_07565 PF00072 Response regulator receiver domain LCH97_07565 PF00196 Bacterial regulatory proteins, luxR family LCH97_07585 PF00072 Response regulator receiver domain LCH97_07585 PF00486 Transcriptional regulatory protein, C terminal LCH97_07590 PF00512 His Kinase A (phospho-acceptor) domain LCH97_07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07590 PF00989 PAS fold LCH97_07590 PF11808 Phosphate regulon sensor protein PhoR LCH97_07600 PF08207 Elongation factor P (EF-P) KOW-like domain LCH97_07600 PF01132 Elongation factor P (EF-P) OB domain LCH97_07600 PF09285 Elongation factor P, C-terminal LCH97_07605 PF01169 Uncharacterized protein family UPF0016 LCH97_07615 PF00575 S1 RNA binding domain LCH97_07615 PF00773 RNB domain LCH97_07615 PF08206 Ribonuclease B OB domain LCH97_07615 PF08461 Ribonuclease R winged-helix domain LCH97_07615 PF17876 Cold shock domain LCH97_07645 PF02580 D-Tyr-tRNA(Tyr) deacylase LCH97_07650 PF03883 Peroxide stress protein YaaA LCH97_07655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH97_07655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH97_07665 PF00005 ABC transporter LCH97_07665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_07670 PF00005 ABC transporter LCH97_07670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_07675 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_07680 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_07685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_07695 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_07705 PF00266 Aminotransferase class-V LCH97_07720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCH97_07725 PF00005 ABC transporter LCH97_07730 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_07735 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LCH97_07740 PF08212 Lipocalin-like domain LCH97_07750 PF03480 Bacterial extracellular solute-binding protein, family 7 LCH97_07755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LCH97_07760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LCH97_07765 PF01202 Shikimate kinase LCH97_07770 PF00356 Bacterial regulatory proteins, lacI family LCH97_07785 PF08264 Anticodon-binding domain of tRNA LCH97_07785 PF09334 tRNA synthetases class I (M) LCH97_07785 PF01588 Putative tRNA binding domain LCH97_07790 PF07690 Major Facilitator Superfamily LCH97_07795 PF10609 NUBPL iron-transfer P-loop NTPase LCH97_07800 PF01177 Asp/Glu/Hydantoin racemase LCH97_07815 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH97_07820 PF03707 Bacterial signalling protein N terminal repeat LCH97_07820 PF00990 Diguanylate cyclase, GGDEF domain LCH97_07820 PF00563 EAL domain LCH97_07825 PF00571 CBS domain LCH97_07825 PF01595 Cyclin M transmembrane N-terminal domain LCH97_07825 PF03471 Transporter associated domain LCH97_07830 PF00672 HAMP domain LCH97_07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_07830 PF02743 Cache domain LCH97_07835 PF02347 Glycine cleavage system P-protein LCH97_07840 PF01597 Glycine cleavage H-protein LCH97_07845 PF01571 Aminomethyltransferase folate-binding domain LCH97_07845 PF08669 Glycine cleavage T-protein C-terminal barrel domain LCH97_07855 PF13520 Amino acid permease LCH97_07860 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCH97_07865 PF11953 Domain of unknown function (DUF3470) LCH97_07865 PF00037 4Fe-4S binding domain LCH97_07870 PF03975 CheD chemotactic sensory transduction LCH97_07875 PF00072 Response regulator receiver domain LCH97_07875 PF01339 CheB methylesterase LCH97_07880 PF01739 CheR methyltransferase, SAM binding domain LCH97_07880 PF03705 CheR methyltransferase, all-alpha domain LCH97_07895 PF01584 CheW-like domain LCH97_07900 PF01584 CheW-like domain LCH97_07900 PF01627 Hpt domain LCH97_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07900 PF02895 Signal transducing histidine kinase, homodimeric domain LCH97_07900 PF09078 CheY binding LCH97_07905 PF00072 Response regulator receiver domain LCH97_07910 PF13466 STAS domain LCH97_07915 PF00512 His Kinase A (phospho-acceptor) domain LCH97_07915 PF13188 PAS domain LCH97_07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07920 PF01584 CheW-like domain LCH97_07920 PF00072 Response regulator receiver domain LCH97_07925 PF01584 CheW-like domain LCH97_07925 PF00072 Response regulator receiver domain LCH97_07930 PF00072 Response regulator receiver domain LCH97_07935 PF04344 Chemotaxis phosphatase, CheZ LCH97_07940 PF01584 CheW-like domain LCH97_07940 PF02895 Signal transducing histidine kinase, homodimeric domain LCH97_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07940 PF01627 Hpt domain LCH97_07940 PF00072 Response regulator receiver domain LCH97_07945 PF08668 HDOD domain LCH97_07945 PF00563 EAL domain LCH97_07950 PF00814 Glycoprotease family LCH97_07955 PF00583 Acetyltransferase (GNAT) family LCH97_07960 PF03167 Uracil DNA glycosylase superfamily LCH97_07970 PF13466 STAS domain LCH97_07975 PF00072 Response regulator receiver domain LCH97_07975 PF00990 Diguanylate cyclase, GGDEF domain LCH97_07980 PF01205 Uncharacterized protein family UPF0029 LCH97_07980 PF09186 Domain of unknown function (DUF1949) LCH97_07985 PF00196 Bacterial regulatory proteins, luxR family LCH97_07985 PF00072 Response regulator receiver domain LCH97_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_07990 PF00512 His Kinase A (phospho-acceptor) domain LCH97_07990 PF00989 PAS fold LCH97_08000 PF07729 FCD domain LCH97_08000 PF00392 Bacterial regulatory proteins, gntR family LCH97_08025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LCH97_08025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LCH97_08030 PF01842 ACT domain LCH97_08030 PF00551 Formyl transferase LCH97_08060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_08060 PF00672 HAMP domain LCH97_08080 PF14834 Glutathione S-transferase, C-terminal domain LCH97_08080 PF02798 Glutathione S-transferase, N-terminal domain LCH97_08085 PF02798 Glutathione S-transferase, N-terminal domain LCH97_08085 PF14834 Glutathione S-transferase, C-terminal domain LCH97_08090 PF03466 LysR substrate binding domain LCH97_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_08105 PF00216 Bacterial DNA-binding protein LCH97_08110 PF03483 B3/4 domain LCH97_08110 PF03484 tRNA synthetase B5 domain LCH97_08110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LCH97_08110 PF03147 Ferredoxin-fold anticodon binding domain LCH97_08110 PF01588 Putative tRNA binding domain LCH97_08115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LCH97_08115 PF01409 tRNA synthetases class II core domain (F) LCH97_08120 PF00453 Ribosomal protein L20 LCH97_08125 PF01632 Ribosomal protein L35 LCH97_08130 PF00707 Translation initiation factor IF-3, C-terminal domain LCH97_08130 PF05198 Translation initiation factor IF-3, N-terminal domain LCH97_08135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH97_08135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH97_08135 PF02824 TGS domain LCH97_08135 PF03129 Anticodon binding domain LCH97_08145 PF01702 Queuine tRNA-ribosyltransferase LCH97_08150 PF02699 Preprotein translocase subunit LCH97_08155 PF13721 SecD export protein N-terminal TM region LCH97_08155 PF02355 Protein export membrane protein LCH97_08155 PF07549 SecD/SecF GG Motif LCH97_08160 PF07549 SecD/SecF GG Motif LCH97_08160 PF02355 Protein export membrane protein LCH97_08165 PF09335 SNARE associated Golgi protein LCH97_08170 PF01119 DNA mismatch repair protein, C-terminal domain LCH97_08170 PF08676 MutL C terminal dimerisation domain LCH97_08180 PF00471 Ribosomal protein L33 LCH97_08185 PF00830 Ribosomal L28 family LCH97_08190 PF00117 Glutamine amidotransferase class-I LCH97_08190 PF06418 CTP synthase N-terminus LCH97_08195 PF00793 DAHP synthetase I family LCH97_08200 PF03952 Enolase, N-terminal domain LCH97_08200 PF00113 Enolase, C-terminal TIM barrel domain LCH97_08205 PF04977 Septum formation initiator LCH97_08210 PF00990 Diguanylate cyclase, GGDEF domain LCH97_08215 PF03658 RnfH family Ubiquitin LCH97_08220 PF03364 Polyketide cyclase / dehydrase and lipid transport LCH97_08225 PF01668 SmpB protein LCH97_08235 PF00117 Glutamine amidotransferase class-I LCH97_08235 PF02540 NAD synthase LCH97_08235 PF00958 GMP synthase C terminal domain LCH97_08245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH97_08245 PF00672 HAMP domain LCH97_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_08245 PF00072 Response regulator receiver domain LCH97_08245 PF01627 Hpt domain LCH97_08245 PF00512 His Kinase A (phospho-acceptor) domain LCH97_08250 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LCH97_08255 PF01037 Lrp/AsnC ligand binding domain LCH97_08255 PF13404 AsnC-type helix-turn-helix domain LCH97_08260 PF00892 EamA-like transporter family LCH97_08265 PF11940 Domain of unknown function (DUF3458) Ig-like fold LCH97_08265 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LCH97_08265 PF01433 Peptidase family M1 domain LCH97_08275 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCH97_08290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH97_08290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LCH97_08295 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCH97_08295 PF12801 4Fe-4S binding domain LCH97_08295 PF13746 4Fe-4S dicluster domain LCH97_08315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_08315 PF12793 Sugar transport-related sRNA regulator N-term LCH97_08320 PF01070 FMN-dependent dehydrogenase LCH97_08330 PF01212 Beta-eliminating lyase LCH97_08335 PF00854 POT family LCH97_08340 PF00849 RNA pseudouridylate synthase LCH97_08350 PF03061 Thioesterase superfamily LCH97_08355 PF00664 ABC transporter transmembrane region LCH97_08355 PF00005 ABC transporter LCH97_08370 PF00403 Heavy-metal-associated domain LCH97_08375 PF13411 MerR HTH family regulatory protein LCH97_08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_08380 PF03466 LysR substrate binding domain LCH97_08390 PF02629 CoA binding domain LCH97_08390 PF00549 CoA-ligase LCH97_08395 PF08442 ATP-grasp domain LCH97_08395 PF00549 CoA-ligase LCH97_08400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH97_08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_08405 PF02817 e3 binding domain LCH97_08405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCH97_08405 PF00364 Biotin-requiring enzyme LCH97_08410 PF16870 2-oxoglutarate dehydrogenase C-terminal LCH97_08410 PF02779 Transketolase, pyrimidine binding domain LCH97_08410 PF16078 2-oxoglutarate dehydrogenase N-terminus LCH97_08410 PF00676 Dehydrogenase E1 component LCH97_08415 PF00285 Citrate synthase, C-terminal domain LCH97_08420 PF03937 Flavinator of succinate dehydrogenase LCH97_08425 PF13085 2Fe-2S iron-sulfur cluster binding domain LCH97_08430 PF02910 Fumarate reductase flavoprotein C-term LCH97_08430 PF00890 FAD binding domain LCH97_08440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LCH97_08445 PF00392 Bacterial regulatory proteins, gntR family LCH97_08445 PF07702 UTRA domain LCH97_08450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LCH97_08450 PF00056 lactate/malate dehydrogenase, NAD binding domain LCH97_08460 PF00152 tRNA synthetases class II (D, K and N) LCH97_08460 PF01336 OB-fold nucleic acid binding domain LCH97_08465 PF13737 Transposase DDE domain LCH97_08475 PF00990 Diguanylate cyclase, GGDEF domain LCH97_08510 PF03707 Bacterial signalling protein N terminal repeat LCH97_08510 PF00990 Diguanylate cyclase, GGDEF domain LCH97_08510 PF00563 EAL domain LCH97_08515 PF01979 Amidohydrolase family LCH97_08525 PF14437 MafB19-like deaminase LCH97_08545 PF00186 Dihydrofolate reductase LCH97_08550 PF00303 Thymidylate synthase LCH97_08555 PF01312 FlhB HrpN YscU SpaS Family LCH97_08560 PF00771 FHIPEP family LCH97_08565 PF00448 SRP54-type protein, GTPase domain LCH97_08575 PF04545 Sigma-70, region 4 LCH97_08575 PF04542 Sigma-70 region 2 LCH97_08575 PF04539 Sigma-70 region 3 LCH97_08580 PF01618 MotA/TolQ/ExbB proton channel family LCH97_08585 PF13307 Helicase C-terminal domain LCH97_08585 PF00929 Exonuclease LCH97_08585 PF04851 Type III restriction enzyme, res subunit LCH97_08595 PF03466 LysR substrate binding domain LCH97_08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_08605 PF13417 Glutathione S-transferase, N-terminal domain LCH97_08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_08610 PF00183 Hsp90 protein LCH97_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_08615 PF00512 His Kinase A (phospho-acceptor) domain LCH97_08615 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_08620 PF11849 Domain of unknown function (DUF3369) LCH97_08625 PF05191 Adenylate kinase, active site lid LCH97_08630 PF02348 Cytidylyltransferase LCH97_08635 PF03966 Trm112p-like protein LCH97_08640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LCH97_08645 PF02472 Biopolymer transport protein ExbD/TolR LCH97_08650 PF01618 MotA/TolQ/ExbB proton channel family LCH97_08655 PF02601 Exonuclease VII, large subunit LCH97_08655 PF13742 OB-fold nucleic acid binding domain LCH97_08665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LCH97_08665 PF01676 Metalloenzyme superfamily LCH97_08670 PF01551 Peptidase family M23 LCH97_08675 PF13180 PDZ domain LCH97_08675 PF03572 Peptidase family S41 LCH97_08685 PF00696 Amino acid kinase family LCH97_08685 PF00583 Acetyltransferase (GNAT) family LCH97_08690 PF04362 Bacterial Fe(2+) trafficking LCH97_08695 PF02503 Polyphosphate kinase middle domain LCH97_08695 PF13090 Polyphosphate kinase C-terminal domain 2 LCH97_08695 PF17941 Polyphosphate kinase C-terminal domain 1 LCH97_08695 PF13089 Polyphosphate kinase N-terminal domain LCH97_08715 PF00849 RNA pseudouridylate synthase LCH97_08720 PF02272 DHHA1 domain LCH97_08720 PF01411 tRNA synthetases class II (A) LCH97_08720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH97_08730 PF00149 Calcineurin-like phosphoesterase LCH97_08740 PF00365 Phosphofructokinase LCH97_08745 PF00204 DNA gyrase B LCH97_08745 PF00986 DNA gyrase B subunit, carboxyl terminus LCH97_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_08745 PF01751 Toprim domain LCH97_08750 PF09997 Predicted membrane protein (DUF2238) LCH97_08755 PF00293 NUDIX domain LCH97_08765 PF00120 Glutamine synthetase, catalytic domain LCH97_08770 PF13416 Bacterial extracellular solute-binding protein LCH97_08775 PF13091 PLD-like domain LCH97_08805 PF05726 Pirin C-terminal cupin domain LCH97_08805 PF02678 Pirin LCH97_08810 PF05726 Pirin C-terminal cupin domain LCH97_08810 PF02678 Pirin LCH97_08820 PF01264 Chorismate synthase LCH97_08825 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_08825 PF00107 Zinc-binding dehydrogenase LCH97_08830 PF00155 Aminotransferase class I and II LCH97_08840 PF00490 Delta-aminolevulinic acid dehydratase LCH97_08850 PF01235 Sodium:alanine symporter family LCH97_08855 PF00226 DnaJ domain LCH97_08855 PF01556 DnaJ C terminal domain LCH97_08855 PF00684 DnaJ central domain LCH97_08860 PF00012 Hsp70 protein LCH97_08865 PF01025 GrpE LCH97_08875 PF00463 Isocitrate lyase family LCH97_08880 PF13520 Amino acid permease LCH97_08885 PF01274 Malate synthase LCH97_08900 PF00005 ABC transporter LCH97_08910 PF00043 Glutathione S-transferase, C-terminal domain LCH97_08910 PF13417 Glutathione S-transferase, N-terminal domain LCH97_08915 PF00579 tRNA synthetases class I (W and Y) LCH97_08925 PF01810 LysE type translocator LCH97_08930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_08930 PF03466 LysR substrate binding domain LCH97_08945 PF12706 Beta-lactamase superfamily domain LCH97_08950 PF01026 TatD related DNase LCH97_08960 PF09115 DNA polymerase III, delta subunit, C terminal LCH97_08965 PF02223 Thymidylate kinase LCH97_08970 PF02618 YceG-like family LCH97_08985 PF00005 ABC transporter LCH97_08990 PF13472 GDSL-like Lipase/Acylhydrolase family LCH97_08995 PF07690 Major Facilitator Superfamily LCH97_09000 PF00578 AhpC/TSA family LCH97_09000 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCH97_09005 PF02938 GAD domain LCH97_09005 PF00152 tRNA synthetases class II (D, K and N) LCH97_09005 PF01336 OB-fold nucleic acid binding domain LCH97_09025 PF01515 Phosphate acetyl/butaryl transferase LCH97_09030 PF00871 Acetokinase family LCH97_09035 PF02253 Phospholipase A1 LCH97_09040 PF01649 Ribosomal protein S20 LCH97_09045 PF03023 Lipid II flippase MurJ LCH97_09050 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LCH97_09050 PF14489 QueF-like protein LCH97_09055 PF12848 ABC transporter LCH97_09055 PF00005 ABC transporter LCH97_09065 PF13737 Transposase DDE domain LCH97_09070 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LCH97_09075 PF03466 LysR substrate binding domain LCH97_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_09085 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_09095 PF00005 ABC transporter LCH97_09095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_09100 PF03466 LysR substrate binding domain LCH97_09110 PF08448 PAS fold LCH97_09110 PF00990 Diguanylate cyclase, GGDEF domain LCH97_09115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH97_09120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LCH97_09125 PF04055 Radical SAM superfamily LCH97_09125 PF11842 Domain of unknown function (DUF3362) LCH97_09125 PF08497 Radical SAM N-terminal LCH97_09130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_09130 PF13426 PAS domain LCH97_09130 PF08447 PAS fold LCH97_09140 PF07759 Protein of unknown function (DUF1615) LCH97_09160 PF01842 ACT domain LCH97_09160 PF13840 ACT domain LCH97_09160 PF00696 Amino acid kinase family LCH97_09165 PF00072 Response regulator receiver domain LCH97_09170 PF01636 Phosphotransferase enzyme family LCH97_09180 PF01545 Cation efflux family LCH97_09180 PF16916 Dimerisation domain of Zinc Transporter LCH97_09185 PF02754 Cysteine-rich domain LCH97_09190 PF13183 4Fe-4S dicluster domain LCH97_09190 PF02589 LUD domain LCH97_09190 PF11870 Domain of unknown function (DUF3390) LCH97_09200 PF00271 Helicase conserved C-terminal domain LCH97_09200 PF00270 DEAD/DEAH box helicase LCH97_09205 PF17113 Regulatory signalling modulator protein AmpE LCH97_09205 PF03186 CobD/Cbib protein LCH97_09230 PF00291 Pyridoxal-phosphate dependent enzyme LCH97_09230 PF14821 Threonine synthase N terminus LCH97_09240 PF03447 Homoserine dehydrogenase, NAD binding domain LCH97_09240 PF00742 Homoserine dehydrogenase LCH97_09240 PF01842 ACT domain LCH97_09245 PF00155 Aminotransferase class I and II LCH97_09250 PF04430 Protein of unknown function (DUF498/DUF598) LCH97_09255 PF06942 GlpM protein LCH97_09265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_09270 PF03109 ABC1 family LCH97_09280 PF00893 Small Multidrug Resistance protein LCH97_09285 PF00691 OmpA family LCH97_09285 PF05736 OprF membrane domain LCH97_09295 PF01209 ubiE/COQ5 methyltransferase family LCH97_09305 PF02547 Queuosine biosynthesis protein LCH97_09310 PF01220 Dehydroquinase class II LCH97_09315 PF00364 Biotin-requiring enzyme LCH97_09320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH97_09320 PF00289 Biotin carboxylase, N-terminal domain LCH97_09320 PF02785 Biotin carboxylase C-terminal domain LCH97_09340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LCH97_09340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LCH97_09350 PF02556 Preprotein translocase subunit SecB LCH97_09355 PF00462 Glutaredoxin LCH97_09365 PF00270 DEAD/DEAH box helicase LCH97_09365 PF00271 Helicase conserved C-terminal domain LCH97_09365 PF17764 3′ DNA-binding domain (3′BD) LCH97_09365 PF18074 Primosomal protein N C-terminal domain LCH97_09365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LCH97_09370 PF01208 Uroporphyrinogen decarboxylase (URO-D) LCH97_09375 PF05552 Conserved TM helix LCH97_09375 PF00924 Mechanosensitive ion channel LCH97_09385 PF00873 AcrB/AcrD/AcrF family LCH97_09395 PF03562 MltA specific insert domain LCH97_09395 PF06725 3D domain LCH97_09400 PF00255 Glutathione peroxidase LCH97_09405 PF00085 Thioredoxin LCH97_09410 PF10672 S-adenosylmethionine-dependent methyltransferase LCH97_09415 PF01467 Cytidylyltransferase-like LCH97_09420 PF00005 ABC transporter LCH97_09420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_09425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_09425 PF00005 ABC transporter LCH97_09430 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH97_09430 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_09435 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_09440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_09445 PF03466 LysR substrate binding domain LCH97_09450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCH97_09450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCH97_09455 PF02082 Transcriptional regulator LCH97_09460 PF00266 Aminotransferase class-V LCH97_09465 PF01592 NifU-like N terminal domain LCH97_09470 PF01521 Iron-sulphur cluster biosynthesis LCH97_09475 PF07743 HSCB C-terminal oligomerisation domain LCH97_09480 PF00012 Hsp70 protein LCH97_09485 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH97_09490 PF04384 Iron-sulphur cluster assembly LCH97_09495 PF00485 Phosphoribulokinase / Uridine kinase family LCH97_09510 PF01235 Sodium:alanine symporter family LCH97_09515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCH97_09515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCH97_09515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCH97_09515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCH97_09520 PF00809 Pterin binding enzyme LCH97_09525 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_09525 PF17862 AAA+ lid domain LCH97_09525 PF01434 Peptidase family M41 LCH97_09525 PF06480 FtsH Extracellular LCH97_09530 PF01728 FtsJ-like methyltransferase LCH97_09535 PF01985 CRS1 / YhbY (CRM) domain LCH97_09545 PF03449 Transcription elongation factor, N-terminal LCH97_09545 PF01272 Transcription elongation factor, GreA/GreB, C-term LCH97_09550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCH97_09550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LCH97_09550 PF02142 MGS-like domain LCH97_09555 PF01810 LysE type translocator LCH97_09560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LCH97_09560 PF00117 Glutamine amidotransferase class-I LCH97_09590 PF02501 Type II secretion system (T2SS), protein I LCH97_09590 PF07963 Prokaryotic N-terminal methylation motif LCH97_09600 PF08334 Type II secretion system (T2SS), protein G LCH97_09600 PF07963 Prokaryotic N-terminal methylation motif LCH97_09605 PF00482 Type II secretion system (T2SS), protein F LCH97_09610 PF00437 Type II/IV secretion system protein LCH97_09615 PF00263 Bacterial type II and III secretion system protein LCH97_09615 PF03958 Bacterial type II/III secretion system short domain LCH97_09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_09625 PF12806 Acetyl-CoA dehydrogenase C-terminal like LCH97_09625 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_09630 PF00766 Electron transfer flavoprotein FAD-binding domain LCH97_09630 PF01012 Electron transfer flavoprotein domain LCH97_09635 PF01012 Electron transfer flavoprotein domain LCH97_09640 PF01575 MaoC like domain LCH97_09650 PF08331 Domain of unknown function (DUF1730) LCH97_09655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LCH97_09660 PF01520 N-acetylmuramoyl-L-alanine amidase LCH97_09660 PF11741 AMIN domain LCH97_09665 PF03884 DNA gyrase inhibitor YacG LCH97_09670 PF07072 Cell division protein LCH97_09675 PF01121 Dephospho-CoA kinase LCH97_09680 PF06750 Bacterial Peptidase A24 N-terminal domain LCH97_09680 PF01478 Type IV leader peptidase family LCH97_09685 PF00482 Type II secretion system (T2SS), protein F LCH97_09690 PF00437 Type II/IV secretion system protein LCH97_09690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCH97_09695 PF00267 Gram-negative porin LCH97_09700 PF00875 DNA photolyase LCH97_09700 PF03441 FAD binding domain of DNA photolyase LCH97_09710 PF01578 Cytochrome C assembly protein LCH97_09715 PF02978 Signal peptide binding domain LCH97_09715 PF00448 SRP54-type protein, GTPase domain LCH97_09715 PF02881 SRP54-type protein, helical bundle domain LCH97_09725 PF08328 Adenylosuccinate lyase C-terminal LCH97_09725 PF00206 Lyase LCH97_09735 PF02673 Bacitracin resistance protein BacA LCH97_09750 PF01078 Magnesium chelatase, subunit ChlI LCH97_09750 PF13335 Magnesium chelatase, subunit ChlI C-terminal LCH97_09755 PF04380 Membrane fusogenic activity LCH97_09760 PF00543 Nitrogen regulatory protein P-II LCH97_09765 PF00909 Ammonium Transporter Family LCH97_09770 PF04386 Stringent starvation protein B LCH97_09775 PF00043 Glutathione S-transferase, C-terminal domain LCH97_09775 PF02798 Glutathione S-transferase, N-terminal domain LCH97_09780 PF02167 Cytochrome C1 family LCH97_09785 PF00032 Cytochrome b(C-terminal)/b6/petD LCH97_09785 PF00033 Cytochrome b/b6/petB LCH97_09790 PF00355 Rieske [2Fe-2S] domain LCH97_09790 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LCH97_09795 PF01784 NIF3 (NGG1p interacting factor 3) LCH97_09800 PF00118 TCP-1/cpn60 chaperonin family LCH97_09805 PF00166 Chaperonin 10 Kd subunit LCH97_09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_09810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCH97_09815 PF00310 Glutamine amidotransferases class-II LCH97_09815 PF01493 GXGXG motif LCH97_09815 PF01645 Conserved region in glutamate synthase LCH97_09815 PF04898 Glutamate synthase central domain LCH97_09820 PF13091 PLD-like domain LCH97_09825 PF01276 Orn/Lys/Arg decarboxylase, major domain LCH97_09825 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LCH97_09825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LCH97_09850 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH97_09855 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_09860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_09890 PF08447 PAS fold LCH97_09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_09895 PF01966 HD domain LCH97_09895 PF11871 Domain of unknown function (DUF3391) LCH97_09900 PF08447 PAS fold LCH97_09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_09905 PF00072 Response regulator receiver domain LCH97_09905 PF00486 Transcriptional regulatory protein, C terminal LCH97_09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_09910 PF00512 His Kinase A (phospho-acceptor) domain LCH97_09910 PF00672 HAMP domain LCH97_09920 PF01138 3' exoribonuclease family, domain 1 LCH97_09920 PF03725 3' exoribonuclease family, domain 2 LCH97_09930 PF00069 Protein kinase domain LCH97_09935 PF03755 YicC-like family, N-terminal region LCH97_09935 PF08340 Domain of unknown function (DUF1732) LCH97_09940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCH97_09940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCH97_09945 PF01312 FlhB HrpN YscU SpaS Family LCH97_09970 PF07196 Flagellin hook IN motif LCH97_09970 PF07195 Flagellar hook-associated protein 2 C-terminus LCH97_09970 PF02465 Flagellar hook-associated protein 2 N-terminus LCH97_09980 PF00700 Bacterial flagellin C-terminal helical region LCH97_09980 PF07196 Flagellin hook IN motif LCH97_09980 PF00669 Bacterial flagellin N-terminal helical region LCH97_09985 PF07196 Flagellin hook IN motif LCH97_09985 PF00669 Bacterial flagellin N-terminal helical region LCH97_09985 PF00700 Bacterial flagellin C-terminal helical region LCH97_09990 PF00535 Glycosyl transferase family 2 LCH97_10000 PF02780 Transketolase, C-terminal domain LCH97_10000 PF02779 Transketolase, pyrimidine binding domain LCH97_10005 PF00676 Dehydrogenase E1 component LCH97_10015 PF01467 Cytidylyltransferase-like LCH97_10015 PF00294 pfkB family carbohydrate kinase LCH97_10020 PF13580 SIS domain LCH97_10025 PF01370 NAD dependent epimerase/dehydratase family LCH97_10030 PF01048 Phosphorylase superfamily LCH97_10035 PF00156 Phosphoribosyl transferase domain LCH97_10040 PF00483 Nucleotidyl transferase LCH97_10050 PF00533 BRCA1 C Terminus (BRCT) domain LCH97_10050 PF01653 NAD-dependent DNA ligase adenylation domain LCH97_10050 PF03120 NAD-dependent DNA ligase OB-fold domain LCH97_10050 PF12826 Helix-hairpin-helix motif LCH97_10050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCH97_10055 PF04354 ZipA, C-terminal FtsZ-binding domain LCH97_10060 PF03544 Gram-negative bacterial TonB protein C-terminal LCH97_10065 PF02463 RecF/RecN/SMC N terminal domain LCH97_10065 PF06470 SMC proteins Flexible Hinge Domain LCH97_10070 PF02622 Uncharacterized ACR, COG1678 LCH97_10075 PF03652 Holliday junction resolvase LCH97_10090 PF01926 50S ribosome-binding GTPase LCH97_10095 PF12843 Putative quorum-sensing-regulated virulence factor LCH97_10140 PF02515 CoA-transferase family III LCH97_10145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCH97_10145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCH97_10145 PF02770 Acyl-CoA dehydrogenase, middle domain LCH97_10150 PF09339 IclR helix-turn-helix domain LCH97_10160 PF00696 Amino acid kinase family LCH97_10165 PF00440 Bacterial regulatory proteins, tetR family LCH97_10175 PF00873 AcrB/AcrD/AcrF family LCH97_10180 PF02321 Outer membrane efflux protein LCH97_10185 PF00202 Aminotransferase class-III LCH97_10190 PF00171 Aldehyde dehydrogenase family LCH97_10195 PF13426 PAS domain LCH97_10195 PF08448 PAS fold LCH97_10195 PF08447 PAS fold LCH97_10195 PF00563 EAL domain LCH97_10195 PF00990 Diguanylate cyclase, GGDEF domain LCH97_10195 PF05231 MASE1 LCH97_10205 PF00583 Acetyltransferase (GNAT) family LCH97_10215 PF00155 Aminotransferase class I and II LCH97_10215 PF00392 Bacterial regulatory proteins, gntR family LCH97_10245 PF03091 CutA1 divalent ion tolerance protein LCH97_10250 PF04186 FxsA cytoplasmic membrane protein LCH97_10255 PF02594 Uncharacterised ACR, YggU family COG1872 LCH97_10260 PF00210 Ferritin-like domain LCH97_10280 PF00578 AhpC/TSA family LCH97_10285 PF00899 ThiF family LCH97_10290 PF00158 Sigma-54 interaction domain LCH97_10290 PF02954 Bacterial regulatory protein, Fis family LCH97_10290 PF00072 Response regulator receiver domain LCH97_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_10295 PF00672 HAMP domain LCH97_10295 PF00512 His Kinase A (phospho-acceptor) domain LCH97_10295 PF00989 PAS fold LCH97_10305 PF01189 16S rRNA methyltransferase RsmB/F LCH97_10305 PF01029 NusB family LCH97_10310 PF01435 Peptidase family M48 LCH97_10315 PF02911 Formyl transferase, C-terminal domain LCH97_10315 PF00551 Formyl transferase LCH97_10320 PF01327 Polypeptide deformylase LCH97_10330 PF02481 DNA recombination-mediator protein A LCH97_10330 PF17782 DprA winged helix domain LCH97_10335 PF04361 Protein of unknown function (DUF494) LCH97_10340 PF13368 Topoisomerase C-terminal repeat LCH97_10340 PF01131 DNA topoisomerase LCH97_10340 PF01751 Toprim domain LCH97_10350 PF01219 Prokaryotic diacylglycerol kinase LCH97_10355 PF02424 ApbE family LCH97_10360 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LCH97_10360 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LCH97_10375 PF08534 Redoxin LCH97_10380 PF03707 Bacterial signalling protein N terminal repeat LCH97_10380 PF00990 Diguanylate cyclase, GGDEF domain LCH97_10380 PF00563 EAL domain LCH97_10390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH97_10390 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_10415 PF13302 Acetyltransferase (GNAT) domain LCH97_10420 PF01259 SAICAR synthetase LCH97_10425 PF02222 ATP-grasp domain LCH97_10425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCH97_10430 PF00731 AIR carboxylase LCH97_10440 PF00691 OmpA family LCH97_10445 PF07676 WD40-like Beta Propeller Repeat LCH97_10445 PF04052 TolB amino-terminal domain LCH97_10460 PF02472 Biopolymer transport protein ExbD/TolR LCH97_10465 PF01596 O-methyltransferase LCH97_10485 PF00580 UvrD/REP helicase N-terminal domain LCH97_10485 PF13361 UvrD-like helicase C-terminal domain LCH97_10490 PF13407 Periplasmic binding protein domain LCH97_10490 PF00356 Bacterial regulatory proteins, lacI family LCH97_10495 PF13407 Periplasmic binding protein domain LCH97_10500 PF02653 Branched-chain amino acid transport system / permease component LCH97_10505 PF00005 ABC transporter LCH97_10510 PF05025 RbsD / FucU transport protein family LCH97_10515 PF00294 pfkB family carbohydrate kinase LCH97_10520 PF01757 Acyltransferase family LCH97_10530 PF00999 Sodium/hydrogen exchanger family LCH97_10530 PF02254 TrkA-N domain LCH97_10535 PF04055 Radical SAM superfamily LCH97_10535 PF01938 TRAM domain LCH97_10535 PF00919 Uncharacterized protein family UPF0004 LCH97_10545 PF02562 PhoH-like protein LCH97_10550 PF02130 Uncharacterized protein family UPF0054 LCH97_10555 PF00571 CBS domain LCH97_10555 PF03471 Transporter associated domain LCH97_10560 PF00795 Carbon-nitrogen hydrolase LCH97_10570 PF00672 HAMP domain LCH97_10570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_10570 PF17200 Single Cache domain 2 LCH97_10575 PF00171 Aldehyde dehydrogenase family LCH97_10580 PF00202 Aminotransferase class-III LCH97_10585 PF00155 Aminotransferase class I and II LCH97_10590 PF01196 Ribosomal protein L17 LCH97_10595 PF01000 RNA polymerase Rpb3/RpoA insert domain LCH97_10595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LCH97_10595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LCH97_10600 PF00163 Ribosomal protein S4/S9 N-terminal domain LCH97_10600 PF01479 S4 domain LCH97_10605 PF00411 Ribosomal protein S11 LCH97_10610 PF00416 Ribosomal protein S13/S18 LCH97_10615 PF00444 Ribosomal protein L36 LCH97_10620 PF01176 Translation initiation factor 1A / IF-1 LCH97_10625 PF00344 SecY translocase LCH97_10630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LCH97_10635 PF00327 Ribosomal protein L30p/L7e LCH97_10640 PF00333 Ribosomal protein S5, N-terminal domain LCH97_10640 PF03719 Ribosomal protein S5, C-terminal domain LCH97_10645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LCH97_10650 PF00347 Ribosomal protein L6 LCH97_10655 PF00410 Ribosomal protein S8 LCH97_10660 PF00253 Ribosomal protein S14p/S29e LCH97_10665 PF00281 Ribosomal protein L5 LCH97_10665 PF00673 ribosomal L5P family C-terminus LCH97_10670 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LCH97_10670 PF00467 KOW motif LCH97_10675 PF00238 Ribosomal protein L14p/L23e LCH97_10680 PF00366 Ribosomal protein S17 LCH97_10685 PF00831 Ribosomal L29 protein LCH97_10690 PF00252 Ribosomal protein L16p/L10e LCH97_10695 PF07650 KH domain LCH97_10695 PF00189 Ribosomal protein S3, C-terminal domain LCH97_10700 PF00237 Ribosomal protein L22p/L17e LCH97_10705 PF00203 Ribosomal protein S19 LCH97_10710 PF00181 Ribosomal Proteins L2, RNA binding domain LCH97_10710 PF03947 Ribosomal Proteins L2, C-terminal domain LCH97_10715 PF00276 Ribosomal protein L23 LCH97_10720 PF00573 Ribosomal protein L4/L1 family LCH97_10725 PF00297 Ribosomal protein L3 LCH97_10730 PF00338 Ribosomal protein S10p/S20e LCH97_10735 PF00009 Elongation factor Tu GTP binding domain LCH97_10735 PF03144 Elongation factor Tu domain 2 LCH97_10735 PF03143 Elongation factor Tu C-terminal domain LCH97_10740 PF00679 Elongation factor G C-terminus LCH97_10740 PF14492 Elongation Factor G, domain II LCH97_10740 PF03764 Elongation factor G, domain IV LCH97_10740 PF00009 Elongation factor Tu GTP binding domain LCH97_10740 PF03144 Elongation factor Tu domain 2 LCH97_10745 PF00177 Ribosomal protein S7p/S5e LCH97_10750 PF00164 Ribosomal protein S12/S23 LCH97_10755 PF04983 RNA polymerase Rpb1, domain 3 LCH97_10755 PF05000 RNA polymerase Rpb1, domain 4 LCH97_10755 PF04997 RNA polymerase Rpb1, domain 1 LCH97_10755 PF00623 RNA polymerase Rpb1, domain 2 LCH97_10755 PF04998 RNA polymerase Rpb1, domain 5 LCH97_10760 PF04560 RNA polymerase Rpb2, domain 7 LCH97_10760 PF04563 RNA polymerase beta subunit LCH97_10760 PF04561 RNA polymerase Rpb2, domain 2 LCH97_10760 PF04565 RNA polymerase Rpb2, domain 3 LCH97_10760 PF10385 RNA polymerase beta subunit external 1 domain LCH97_10760 PF00562 RNA polymerase Rpb2, domain 6 LCH97_10765 PF16320 Ribosomal protein L7/L12 dimerisation domain LCH97_10765 PF00542 Ribosomal protein L7/L12 C-terminal domain LCH97_10770 PF00466 Ribosomal protein L10 LCH97_10785 PF00687 Ribosomal protein L1p/L10e family LCH97_10790 PF00298 Ribosomal protein L11, RNA binding domain LCH97_10790 PF03946 Ribosomal protein L11, N-terminal domain LCH97_10795 PF00467 KOW motif LCH97_10795 PF02357 Transcription termination factor nusG LCH97_10800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LCH97_10810 PF03143 Elongation factor Tu C-terminal domain LCH97_10810 PF03144 Elongation factor Tu domain 2 LCH97_10810 PF00009 Elongation factor Tu GTP binding domain LCH97_10830 PF00037 4Fe-4S binding domain LCH97_10840 PF00448 SRP54-type protein, GTPase domain LCH97_10840 PF02881 SRP54-type protein, helical bundle domain LCH97_10845 PF00005 ABC transporter LCH97_10850 PF18075 FtsX extracellular domain LCH97_10855 PF04542 Sigma-70 region 2 LCH97_10855 PF04545 Sigma-70, region 4 LCH97_10855 PF00140 Sigma-70 factor, region 1.2 LCH97_10870 PF00114 Pilin (bacterial filament) LCH97_10870 PF07963 Prokaryotic N-terminal methylation motif LCH97_10875 PF00114 Pilin (bacterial filament) LCH97_10875 PF07963 Prokaryotic N-terminal methylation motif LCH97_10890 PF00202 Aminotransferase class-III LCH97_10900 PF00696 Amino acid kinase family LCH97_10900 PF01472 PUA domain LCH97_10905 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LCH97_10915 PF02540 NAD synthase LCH97_10915 PF00958 GMP synthase C terminal domain LCH97_10915 PF00117 Glutamine amidotransferase class-I LCH97_10920 PF17864 RuvB AAA lid domain LCH97_10920 PF05491 RuvB C-terminal winged helix domain LCH97_10920 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCH97_10935 PF01330 RuvA N terminal domain LCH97_10935 PF07499 RuvA, C-terminal domain LCH97_10950 PF02075 Crossover junction endodeoxyribonuclease RuvC LCH97_10955 PF00483 Nucleotidyl transferase LCH97_10960 PF01636 Phosphotransferase enzyme family LCH97_10965 PF04453 LPS transport system D LCH97_10970 PF09312 SurA N-terminal domain LCH97_10975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LCH97_10990 PF00563 EAL domain LCH97_10990 PF01590 GAF domain LCH97_10990 PF00990 Diguanylate cyclase, GGDEF domain LCH97_10990 PF00989 PAS fold LCH97_10995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH97_10995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH97_11015 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LCH97_11020 PF07690 Major Facilitator Superfamily LCH97_11030 PF04115 Ureidoglycolate lyase LCH97_11035 PF03561 Allantoicase repeat LCH97_11040 PF00005 ABC transporter LCH97_11045 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11050 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11060 PF00392 Bacterial regulatory proteins, gntR family LCH97_11060 PF07729 FCD domain LCH97_11065 PF00849 RNA pseudouridylate synthase LCH97_11065 PF01479 S4 domain LCH97_11070 PF07437 YfaZ precursor LCH97_11075 PF04337 Protein of unknown function, DUF480 LCH97_11080 PF01728 FtsJ-like methyltransferase LCH97_11080 PF01479 S4 domain LCH97_11095 PF00120 Glutamine synthetase, catalytic domain LCH97_11100 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11105 PF00171 Aldehyde dehydrogenase family LCH97_11110 PF16177 Acetyl-coenzyme A synthetase N-terminus LCH97_11110 PF00501 AMP-binding enzyme LCH97_11110 PF13193 AMP-binding enzyme C-terminal domain LCH97_11115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_11115 PF00672 HAMP domain LCH97_11130 PF09423 PhoD-like phosphatase LCH97_11130 PF16655 PhoD-like phosphatase, N-terminal domain LCH97_11180 PF02810 SEC-C motif LCH97_11180 PF07517 SecA DEAD-like domain LCH97_11180 PF01043 SecA preprotein cross-linking domain LCH97_11180 PF07516 SecA Wing and Scaffold domain LCH97_11185 PF00005 ABC transporter LCH97_11185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_11190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_11190 PF00005 ABC transporter LCH97_11195 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11195 PF12911 N-terminal TM domain of oligopeptide transport permease C LCH97_11200 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_11210 PF01979 Amidohydrolase family LCH97_11215 PF01206 Sulfurtransferase TusA LCH97_11230 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LCH97_11235 PF00091 Tubulin/FtsZ family, GTPase domain LCH97_11235 PF12327 FtsZ family, C-terminal domain LCH97_11240 PF02491 SHS2 domain inserted in FTSA LCH97_11245 PF03799 Cell division protein FtsQ LCH97_11245 PF08478 POTRA domain, FtsQ-type LCH97_11250 PF07478 D-ala D-ala ligase C-terminus LCH97_11250 PF01820 D-ala D-ala ligase N-terminus LCH97_11255 PF01225 Mur ligase family, catalytic domain LCH97_11255 PF02875 Mur ligase family, glutamate ligase domain LCH97_11255 PF08245 Mur ligase middle domain LCH97_11260 PF04101 Glycosyltransferase family 28 C-terminal domain LCH97_11260 PF03033 Glycosyltransferase family 28 N-terminal domain LCH97_11265 PF01098 Cell cycle protein LCH97_11270 PF02875 Mur ligase family, glutamate ligase domain LCH97_11270 PF08245 Mur ligase middle domain LCH97_11275 PF00953 Glycosyl transferase family 4 LCH97_11280 PF08245 Mur ligase middle domain LCH97_11280 PF02875 Mur ligase family, glutamate ligase domain LCH97_11280 PF01225 Mur ligase family, catalytic domain LCH97_11285 PF01225 Mur ligase family, catalytic domain LCH97_11285 PF02875 Mur ligase family, glutamate ligase domain LCH97_11285 PF08245 Mur ligase middle domain LCH97_11290 PF03717 Penicillin-binding Protein dimerisation domain LCH97_11290 PF00905 Penicillin binding protein transpeptidase domain LCH97_11300 PF01795 MraW methylase family LCH97_11305 PF02381 MraZ protein, putative antitoxin-like LCH97_11310 PF02637 GatB domain LCH97_11310 PF02934 GatB/GatE catalytic domain LCH97_11315 PF01425 Amidase LCH97_11320 PF02686 Glu-tRNAGln amidotransferase C subunit LCH97_11330 PF04085 rod shape-determining protein MreC LCH97_11340 PF03717 Penicillin-binding Protein dimerisation domain LCH97_11340 PF00905 Penicillin binding protein transpeptidase domain LCH97_11345 PF01098 Cell cycle protein LCH97_11360 PF04116 Fatty acid hydroxylase superfamily LCH97_11375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH97_11375 PF12833 Helix-turn-helix domain LCH97_11375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH97_11375 PF02805 Metal binding domain of Ada LCH97_11380 PF01914 MarC family integral membrane protein LCH97_11390 PF03009 Glycerophosphoryl diester phosphodiesterase family LCH97_11395 PF00563 EAL domain LCH97_11395 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11395 PF03707 Bacterial signalling protein N terminal repeat LCH97_11395 PF13188 PAS domain LCH97_11405 PF00817 impB/mucB/samB family LCH97_11405 PF11798 IMS family HHH motif LCH97_11415 PF00672 HAMP domain LCH97_11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_11415 PF00512 His Kinase A (phospho-acceptor) domain LCH97_11420 PF00072 Response regulator receiver domain LCH97_11420 PF00486 Transcriptional regulatory protein, C terminal LCH97_11425 PF01734 Patatin-like phospholipase LCH97_11430 PF01734 Patatin-like phospholipase LCH97_11435 PF08241 Methyltransferase domain LCH97_11440 PF00561 alpha/beta hydrolase fold LCH97_11445 PF00563 EAL domain LCH97_11445 PF03707 Bacterial signalling protein N terminal repeat LCH97_11445 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11450 PF00155 Aminotransferase class I and II LCH97_11455 PF06968 Biotin and Thiamin Synthesis associated domain LCH97_11455 PF04055 Radical SAM superfamily LCH97_11470 PF00588 SpoU rRNA Methylase family LCH97_11475 PF03330 Lytic transglycolase LCH97_11475 PF05036 Sporulation related domain LCH97_11485 PF00472 RF-1 domain LCH97_11485 PF03462 PCRF domain LCH97_11490 PF01488 Shikimate / quinate 5-dehydrogenase LCH97_11490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LCH97_11490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LCH97_11495 PF00756 Putative esterase LCH97_11500 PF00107 Zinc-binding dehydrogenase LCH97_11500 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_11505 PF03466 LysR substrate binding domain LCH97_11510 PF01243 Pyridoxamine 5'-phosphate oxidase LCH97_11510 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LCH97_11520 PF04151 Bacterial pre-peptidase C-terminal domain LCH97_11520 PF04389 Peptidase family M28 LCH97_11525 PF07308 Protein of unknown function (DUF1456) LCH97_11535 PF12833 Helix-turn-helix domain LCH97_11540 PF01161 Phosphatidylethanolamine-binding protein LCH97_11545 PF01053 Cys/Met metabolism PLP-dependent enzyme LCH97_11550 PF01541 GIY-YIG catalytic domain LCH97_11560 PF07694 5TMR of 5TMR-LYT LCH97_11560 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11565 PF00753 Metallo-beta-lactamase superfamily LCH97_11570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH97_11580 PF08220 DeoR-like helix-turn-helix domain LCH97_11580 PF00455 DeoR C terminal sensor domain LCH97_11585 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11590 PF00773 RNB domain LCH97_11605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH97_11605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH97_11615 PF00155 Aminotransferase class I and II LCH97_11620 PF00916 Sulfate permease family LCH97_11620 PF01740 STAS domain LCH97_11625 PF00324 Amino acid permease LCH97_11630 PF04199 Putative cyclase LCH97_11635 PF00248 Aldo/keto reductase family LCH97_11640 PF03459 TOBE domain LCH97_11640 PF17912 MalK OB fold domain LCH97_11640 PF00005 ABC transporter LCH97_11645 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11650 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_11655 PF01547 Bacterial extracellular solute-binding protein LCH97_11660 PF00512 His Kinase A (phospho-acceptor) domain LCH97_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_11665 PF00486 Transcriptional regulatory protein, C terminal LCH97_11665 PF00072 Response regulator receiver domain LCH97_11670 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCH97_11675 PF00483 Nucleotidyl transferase LCH97_11680 PF04321 RmlD substrate binding domain LCH97_11685 PF16363 GDP-mannose 4,6 dehydratase LCH97_11690 PF01081 KDPG and KHG aldolase LCH97_11695 PF00920 Dehydratase family LCH97_11700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LCH97_11700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LCH97_11705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LCH97_11710 PF02685 Glucokinase LCH97_11715 PF02685 Glucokinase LCH97_11715 PF01418 Helix-turn-helix domain, rpiR family LCH97_11715 PF01380 SIS domain LCH97_11720 PF00342 Phosphoglucose isomerase LCH97_11730 PF01863 Protein of unknown function DUF45 LCH97_11735 PF01048 Phosphorylase superfamily LCH97_11740 PF01618 MotA/TolQ/ExbB proton channel family LCH97_11745 PF01300 Telomere recombination LCH97_11755 PF02843 Phosphoribosylglycinamide synthetase, C domain LCH97_11755 PF02844 Phosphoribosylglycinamide synthetase, N domain LCH97_11755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LCH97_11760 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LCH97_11765 PF02142 MGS-like domain LCH97_11765 PF01808 AICARFT/IMPCHase bienzyme LCH97_11770 PF02954 Bacterial regulatory protein, Fis family LCH97_11775 PF01207 Dihydrouridine synthase (Dus) LCH97_11785 PF13188 PAS domain LCH97_11785 PF00563 EAL domain LCH97_11785 PF03707 Bacterial signalling protein N terminal repeat LCH97_11785 PF00990 Diguanylate cyclase, GGDEF domain LCH97_11795 PF01103 Surface antigen LCH97_11795 PF07244 Surface antigen variable number repeat LCH97_11800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH97_11810 PF00085 Thioredoxin LCH97_11825 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCH97_11825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCH97_11830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCH97_11830 PF00364 Biotin-requiring enzyme LCH97_11830 PF02817 e3 binding domain LCH97_11835 PF17831 Pyruvate dehydrogenase E1 component middle domain LCH97_11835 PF00456 Transketolase, thiamine diphosphate binding domain LCH97_11840 PF01435 Peptidase family M48 LCH97_11840 PF13181 Tetratricopeptide repeat LCH97_11860 PF00484 Carbonic anhydrase LCH97_11865 PF01467 Cytidylyltransferase-like LCH97_11875 PF02590 Predicted SPOUT methyltransferase LCH97_11895 PF01464 Transglycosylase SLT domain LCH97_11900 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LCH97_11900 PF06144 DNA polymerase III, delta subunit LCH97_11910 PF08264 Anticodon-binding domain of tRNA LCH97_11910 PF09334 tRNA synthetases class I (M) LCH97_11910 PF00133 tRNA synthetases class I (I, L, M and V) LCH97_11910 PF13603 Leucyl-tRNA synthetase, Domain 2 LCH97_11920 PF01925 Sulfite exporter TauE/SafE LCH97_11930 PF01812 5-formyltetrahydrofolate cyclo-ligase family LCH97_11940 PF05164 Cell division protein ZapA LCH97_11950 PF01497 Periplasmic binding protein LCH97_11955 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LCH97_11960 PF00593 TonB dependent receptor LCH97_11960 PF07715 TonB-dependent Receptor Plug Domain LCH97_11965 PF02277 Phosphoribosyltransferase LCH97_11970 PF00300 Histidine phosphatase superfamily (branch 1) LCH97_11975 PF02654 Cobalamin-5-phosphate synthase LCH97_11985 PF00491 Arginase family LCH97_12000 PF03309 Type III pantothenate kinase LCH97_12005 PF03099 Biotin/lipoate A/B protein ligase family LCH97_12005 PF02237 Biotin protein ligase C terminal domain LCH97_12005 PF08279 HTH domain LCH97_12010 PF01467 Cytidylyltransferase-like LCH97_12045 PF03544 Gram-negative bacterial TonB protein C-terminal LCH97_12050 PF01618 MotA/TolQ/ExbB proton channel family LCH97_12055 PF02472 Biopolymer transport protein ExbD/TolR LCH97_12060 PF18331 PKHD-type hydroxylase C-terminal domain LCH97_12060 PF13640 2OG-Fe(II) oxygenase superfamily LCH97_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_12065 PF03466 LysR substrate binding domain LCH97_12090 PF07963 Prokaryotic N-terminal methylation motif LCH97_12090 PF00114 Pilin (bacterial filament) LCH97_12095 PF00873 AcrB/AcrD/AcrF family LCH97_12100 PF13533 Biotin-lipoyl like LCH97_12140 PF00171 Aldehyde dehydrogenase family LCH97_12145 PF00158 Sigma-54 interaction domain LCH97_12145 PF02954 Bacterial regulatory protein, Fis family LCH97_12145 PF01590 GAF domain LCH97_12185 PF02233 NAD(P) transhydrogenase beta subunit LCH97_12190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LCH97_12195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCH97_12195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCH97_12200 PF03009 Glycerophosphoryl diester phosphodiesterase family LCH97_12220 PF12631 MnmE helical domain LCH97_12220 PF10396 GTP-binding protein TrmE N-terminus LCH97_12220 PF01926 50S ribosome-binding GTPase LCH97_12225 PF02096 60Kd inner membrane protein LCH97_12225 PF14849 YidC periplasmic domain LCH97_12230 PF01809 Putative membrane protein insertion efficiency factor LCH97_12235 PF00825 Ribonuclease P LCH97_12240 PF00468 Ribosomal protein L34 LCH97_12245 PF00308 Bacterial dnaA protein LCH97_12245 PF08299 Bacterial dnaA protein helix-turn-helix LCH97_12245 PF11638 DnaA N-terminal domain LCH97_12250 PF00712 DNA polymerase III beta subunit, N-terminal domain LCH97_12250 PF02768 DNA polymerase III beta subunit, C-terminal domain LCH97_12250 PF02767 DNA polymerase III beta subunit, central domain LCH97_12255 PF18053 DNA gyrase B subunit insert domain LCH97_12255 PF00986 DNA gyrase B subunit, carboxyl terminus LCH97_12255 PF00204 DNA gyrase B LCH97_12255 PF01751 Toprim domain LCH97_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_12275 PF13737 Transposase DDE domain LCH97_12290 PF13476 AAA domain LCH97_12310 PF01810 LysE type translocator LCH97_12315 PF01037 Lrp/AsnC ligand binding domain LCH97_12320 PF13099 Domain of unknown function (DUF3944) LCH97_12320 PF03981 Ubiquinol-cytochrome C chaperone LCH97_12330 PF13416 Bacterial extracellular solute-binding protein LCH97_12335 PF01266 FAD dependent oxidoreductase LCH97_12340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_12340 PF03466 LysR substrate binding domain LCH97_12345 PF00654 Voltage gated chloride channel LCH97_12350 PF12848 ABC transporter LCH97_12350 PF00005 ABC transporter LCH97_12355 PF00072 Response regulator receiver domain LCH97_12360 PF18415 Histidine kinase receptor ArcB trans-membrane domain LCH97_12360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_12360 PF00512 His Kinase A (phospho-acceptor) domain LCH97_12360 PF01627 Hpt domain LCH97_12360 PF00989 PAS fold LCH97_12360 PF00072 Response regulator receiver domain LCH97_12365 PF00892 EamA-like transporter family LCH97_12370 PF01037 Lrp/AsnC ligand binding domain LCH97_12375 PF00571 CBS domain LCH97_12380 PF00557 Metallopeptidase family M24 LCH97_12380 PF05195 Aminopeptidase P, N-terminal domain LCH97_12385 PF03594 Benzoate membrane transport protein LCH97_12390 PF00155 Aminotransferase class I and II LCH97_12390 PF00392 Bacterial regulatory proteins, gntR family LCH97_12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_12395 PF03466 LysR substrate binding domain LCH97_12400 PF01494 FAD binding domain LCH97_12430 PF00484 Carbonic anhydrase LCH97_12435 PF00892 EamA-like transporter family LCH97_12440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_12440 PF00672 HAMP domain LCH97_12440 PF12729 Four helix bundle sensory module for signal transduction LCH97_12445 PF00158 Sigma-54 interaction domain LCH97_12445 PF00072 Response regulator receiver domain LCH97_12445 PF02954 Bacterial regulatory protein, Fis family LCH97_12450 PF02743 Cache domain LCH97_12450 PF00512 His Kinase A (phospho-acceptor) domain LCH97_12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_12465 PF16868 NMT1-like family LCH97_12485 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH97_12485 PF03473 MOSC domain LCH97_12485 PF03476 MOSC N-terminal beta barrel domain LCH97_12510 PF07690 Major Facilitator Superfamily LCH97_12530 PF00221 Aromatic amino acid lyase LCH97_12535 PF17391 Urocanase N-terminal domain LCH97_12535 PF17392 Urocanase C-terminal domain LCH97_12535 PF01175 Urocanase Rossmann-like domain LCH97_12540 PF00491 Arginase family LCH97_12545 PF01979 Amidohydrolase family LCH97_12550 PF00392 Bacterial regulatory proteins, gntR family LCH97_12550 PF07702 UTRA domain LCH97_12555 PF01263 Aldose 1-epimerase LCH97_12570 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LCH97_12575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH97_12585 PF00535 Glycosyl transferase family 2 LCH97_12595 PF05360 yiaA/B two helix domain LCH97_12605 PF04452 RNA methyltransferase LCH97_12610 PF00459 Inositol monophosphatase family LCH97_12640 PF00892 EamA-like transporter family LCH97_12645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH97_12650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCH97_12650 PF01411 tRNA synthetases class II (A) LCH97_12650 PF02272 DHHA1 domain LCH97_12670 PF00892 EamA-like transporter family LCH97_12700 PF01970 Tripartite tricarboxylate transporter TctA family LCH97_12720 PF00072 Response regulator receiver domain LCH97_12720 PF00486 Transcriptional regulatory protein, C terminal LCH97_12725 PF00672 HAMP domain LCH97_12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_12725 PF00512 His Kinase A (phospho-acceptor) domain LCH97_12730 PF03707 Bacterial signalling protein N terminal repeat LCH97_12730 PF00990 Diguanylate cyclase, GGDEF domain LCH97_12730 PF00563 EAL domain LCH97_12735 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LCH97_12735 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LCH97_12740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCH97_12740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCH97_12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_12745 PF02743 Cache domain LCH97_12745 PF00672 HAMP domain LCH97_12750 PF11871 Domain of unknown function (DUF3391) LCH97_12750 PF01966 HD domain LCH97_12755 PF00563 EAL domain LCH97_12755 PF00990 Diguanylate cyclase, GGDEF domain LCH97_12755 PF03707 Bacterial signalling protein N terminal repeat LCH97_12760 PF00149 Calcineurin-like phosphoesterase LCH97_12760 PF02872 5'-nucleotidase, C-terminal domain LCH97_12770 PF00043 Glutathione S-transferase, C-terminal domain LCH97_12770 PF02798 Glutathione S-transferase, N-terminal domain LCH97_12775 PF08021 Siderophore-interacting FAD-binding domain LCH97_12775 PF04954 Siderophore-interacting protein LCH97_12780 PF00005 ABC transporter LCH97_12785 PF01032 FecCD transport family LCH97_12795 PF00593 TonB dependent receptor LCH97_12795 PF07715 TonB-dependent Receptor Plug Domain LCH97_12810 PF09905 DNA-binding protein VF530 LCH97_12820 PF00672 HAMP domain LCH97_12820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_12825 PF00583 Acetyltransferase (GNAT) family LCH97_12835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH97_12845 PF03150 Di-haem cytochrome c peroxidase LCH97_12845 PF00034 Cytochrome c LCH97_12850 PF01475 Ferric uptake regulator family LCH97_12895 PF12833 Helix-turn-helix domain LCH97_12895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LCH97_12900 PF00266 Aminotransferase class-V LCH97_12905 PF01037 Lrp/AsnC ligand binding domain LCH97_12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_12915 PF03466 LysR substrate binding domain LCH97_12930 PF01136 Peptidase family U32 LCH97_12930 PF12392 Collagenase LCH97_12950 PF17854 FtsK alpha domain LCH97_12950 PF09397 Ftsk gamma domain LCH97_12950 PF01580 FtsK/SpoIIIE family LCH97_12960 PF04304 Protein of unknown function (DUF454) LCH97_12965 PF01126 Heme oxygenase LCH97_12970 PF07715 TonB-dependent Receptor Plug Domain LCH97_12970 PF00593 TonB dependent receptor LCH97_12985 PF00990 Diguanylate cyclase, GGDEF domain LCH97_12990 PF17785 PUA-like domain LCH97_12990 PF10672 S-adenosylmethionine-dependent methyltransferase LCH97_12995 PF00072 Response regulator receiver domain LCH97_13020 PF13667 ThiC-associated domain LCH97_13020 PF01964 Radical SAM ThiC family LCH97_13030 PF00581 Rhodanese-like domain LCH97_13035 PF03167 Uracil DNA glycosylase superfamily LCH97_13045 PF02675 S-adenosylmethionine decarboxylase LCH97_13080 PF01432 Peptidase family M3 LCH97_13085 PF00072 Response regulator receiver domain LCH97_13085 PF00486 Transcriptional regulatory protein, C terminal LCH97_13095 PF02107 Flagellar L-ring protein LCH97_13100 PF01370 NAD dependent epimerase/dehydratase family LCH97_13100 PF02222 ATP-grasp domain LCH97_13110 PF08379 Bacterial transglutaminase-like N-terminal region LCH97_13110 PF01841 Transglutaminase-like superfamily LCH97_13120 PF04168 A predicted alpha-helical domain with a conserved ER motif. LCH97_13120 PF14403 Circularly permuted ATP-grasp type 2 LCH97_13125 PF14403 Circularly permuted ATP-grasp type 2 LCH97_13130 PF00990 Diguanylate cyclase, GGDEF domain LCH97_13130 PF00072 Response regulator receiver domain LCH97_13140 PF03441 FAD binding domain of DNA photolyase LCH97_13140 PF00875 DNA photolyase LCH97_13145 PF02525 Flavodoxin-like fold LCH97_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_13150 PF03466 LysR substrate binding domain LCH97_13160 PF03441 FAD binding domain of DNA photolyase LCH97_13160 PF00875 DNA photolyase LCH97_13170 PF13419 Haloacid dehalogenase-like hydrolase LCH97_13180 PF02581 Thiamine monophosphate synthase LCH97_13185 PF08543 Phosphomethylpyrimidine kinase LCH97_13190 PF00301 Rubredoxin LCH97_13195 PF01435 Peptidase family M48 LCH97_13205 PF03653 Uncharacterised protein family (UPF0093) LCH97_13215 PF01928 CYTH domain LCH97_13230 PF00202 Aminotransferase class-III LCH97_13235 PF00176 SNF2 family N-terminal domain LCH97_13235 PF00271 Helicase conserved C-terminal domain LCH97_13235 PF12419 SNF2 Helicase protein LCH97_13245 PF00072 Response regulator receiver domain LCH97_13245 PF00990 Diguanylate cyclase, GGDEF domain LCH97_13255 PF13280 WYL domain LCH97_13255 PF08279 HTH domain LCH97_13265 PF01878 EVE domain LCH97_13280 PF00990 Diguanylate cyclase, GGDEF domain LCH97_13290 PF03150 Di-haem cytochrome c peroxidase LCH97_13315 PF01491 Frataxin-like domain LCH97_13320 PF09335 SNARE associated Golgi protein LCH97_13325 PF00398 Ribosomal RNA adenine dimethylase LCH97_13330 PF00005 ABC transporter LCH97_13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCH97_13340 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_13345 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_13350 PF00005 ABC transporter LCH97_13355 PF00563 EAL domain LCH97_13355 PF08668 HDOD domain LCH97_13360 PF00437 Type II/IV secretion system protein LCH97_13365 PF00437 Type II/IV secretion system protein LCH97_13370 PF01168 Alanine racemase, N-terminal domain LCH97_13375 PF03807 NADP oxidoreductase coenzyme F420-dependent LCH97_13375 PF14748 Pyrroline-5-carboxylate reductase dimerisation LCH97_13380 PF02325 YGGT family LCH97_13385 PF00034 Cytochrome c LCH97_13390 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCH97_13395 PF00793 DAHP synthetase I family LCH97_13410 PF01116 Fructose-bisphosphate aldolase class-II LCH97_13415 PF01810 LysE type translocator LCH97_13420 PF00162 Phosphoglycerate kinase LCH97_13425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH97_13425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH97_13430 PF02779 Transketolase, pyrimidine binding domain LCH97_13430 PF02780 Transketolase, C-terminal domain LCH97_13430 PF00456 Transketolase, thiamine diphosphate binding domain LCH97_13445 PF00521 DNA gyrase/topoisomerase IV, subunit A LCH97_13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_13450 PF00512 His Kinase A (phospho-acceptor) domain LCH97_13455 PF02954 Bacterial regulatory protein, Fis family LCH97_13455 PF00072 Response regulator receiver domain LCH97_13455 PF00158 Sigma-54 interaction domain LCH97_13460 PF17200 Single Cache domain 2 LCH97_13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_13460 PF00672 HAMP domain LCH97_13465 PF03466 LysR substrate binding domain LCH97_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_13475 PF01361 Tautomerase enzyme LCH97_13485 PF14698 Argininosuccinate lyase C-terminal LCH97_13485 PF00206 Lyase LCH97_13490 PF07152 YaeQ protein LCH97_13510 PF00392 Bacterial regulatory proteins, gntR family LCH97_13510 PF00155 Aminotransferase class I and II LCH97_13515 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCH97_13515 PF12801 4Fe-4S binding domain LCH97_13515 PF13746 4Fe-4S dicluster domain LCH97_13520 PF08448 PAS fold LCH97_13520 PF00990 Diguanylate cyclase, GGDEF domain LCH97_13530 PF00583 Acetyltransferase (GNAT) family LCH97_13560 PF00486 Transcriptional regulatory protein, C terminal LCH97_13560 PF00072 Response regulator receiver domain LCH97_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_13565 PF00512 His Kinase A (phospho-acceptor) domain LCH97_13565 PF00672 HAMP domain LCH97_13570 PF02805 Metal binding domain of Ada LCH97_13570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCH97_13570 PF12833 Helix-turn-helix domain LCH97_13570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCH97_13575 PF01926 50S ribosome-binding GTPase LCH97_13580 PF00034 Cytochrome c LCH97_13585 PF05140 ResB-like family LCH97_13590 PF01578 Cytochrome C assembly protein LCH97_13600 PF04325 Protein of unknown function (DUF465) LCH97_13605 PF00990 Diguanylate cyclase, GGDEF domain LCH97_13605 PF05230 MASE2 domain LCH97_13610 PF00849 RNA pseudouridylate synthase LCH97_13610 PF01479 S4 domain LCH97_13615 PF00581 Rhodanese-like domain LCH97_13625 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LCH97_13635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LCH97_13635 PF03900 Porphobilinogen deaminase, C-terminal domain LCH97_13645 PF00311 Phosphoenolpyruvate carboxylase LCH97_13670 PF07715 TonB-dependent Receptor Plug Domain LCH97_13670 PF00593 TonB dependent receptor LCH97_13675 PF06224 Winged helix DNA-binding domain LCH97_13680 PF00664 ABC transporter transmembrane region LCH97_13680 PF00005 ABC transporter LCH97_13685 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LCH97_13685 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LCH97_13690 PF08240 Alcohol dehydrogenase GroES-like domain LCH97_13690 PF00107 Zinc-binding dehydrogenase LCH97_13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_13700 PF00512 His Kinase A (phospho-acceptor) domain LCH97_13700 PF00989 PAS fold LCH97_13700 PF01627 Hpt domain LCH97_13700 PF00072 Response regulator receiver domain LCH97_13700 PF18415 Histidine kinase receptor ArcB trans-membrane domain LCH97_13705 PF05728 Uncharacterised protein family (UPF0227) LCH97_13715 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCH97_13715 PF02310 B12 binding domain LCH97_13715 PF02607 B12 binding domain LCH97_13715 PF02574 Homocysteine S-methyltransferase LCH97_13715 PF00809 Pterin binding enzyme LCH97_13730 PF00892 EamA-like transporter family LCH97_13735 PF07702 UTRA domain LCH97_13735 PF00392 Bacterial regulatory proteins, gntR family LCH97_13740 PF01979 Amidohydrolase family LCH97_13745 PF01380 SIS domain LCH97_13750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH97_13750 PF02896 PEP-utilising enzyme, TIM barrel domain LCH97_13750 PF00391 PEP-utilising enzyme, mobile domain LCH97_13750 PF00381 PTS HPr component phosphorylation site LCH97_13750 PF05524 PEP-utilising enzyme, N-terminal LCH97_13755 PF02378 Phosphotransferase system, EIIC LCH97_13755 PF00367 phosphotransferase system, EIIB LCH97_13755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCH97_13760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH97_13760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH97_13765 PF01037 Lrp/AsnC ligand binding domain LCH97_13780 PF02028 BCCT, betaine/carnitine/choline family transporter LCH97_13785 PF00486 Transcriptional regulatory protein, C terminal LCH97_13785 PF00072 Response regulator receiver domain LCH97_13790 PF11808 Phosphate regulon sensor protein PhoR LCH97_13790 PF00989 PAS fold LCH97_13790 PF00512 His Kinase A (phospho-acceptor) domain LCH97_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_13800 PF00923 Transaldolase/Fructose-6-phosphate aldolase LCH97_13805 PF00106 short chain dehydrogenase LCH97_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_13810 PF03466 LysR substrate binding domain LCH97_13815 PF01814 Hemerythrin HHE cation binding domain LCH97_13820 PF01510 N-acetylmuramoyl-L-alanine amidase LCH97_13825 PF01062 Bestrophin, RFP-TM, chloride channel LCH97_13835 PF02705 K+ potassium transporter LCH97_13845 PF00480 ROK family LCH97_13855 PF17912 MalK OB fold domain LCH97_13855 PF00005 ABC transporter LCH97_13860 PF01915 Glycosyl hydrolase family 3 C-terminal domain LCH97_13860 PF00933 Glycosyl hydrolase family 3 N terminal domain LCH97_13865 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_13870 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_13880 PF07693 KAP family P-loop domain LCH97_13885 PF04073 Aminoacyl-tRNA editing domain LCH97_13885 PF03129 Anticodon binding domain LCH97_13885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCH97_13890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LCH97_13890 PF01464 Transglycosylase SLT domain LCH97_13900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCH97_13900 PF00205 Thiamine pyrophosphate enzyme, central domain LCH97_13900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCH97_13905 PF10369 Small subunit of acetolactate synthase LCH97_13910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LCH97_13910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LCH97_13915 PF01066 CDP-alcohol phosphatidyltransferase LCH97_13925 PF00756 Putative esterase LCH97_13935 PF08502 LeuA allosteric (dimerisation) domain LCH97_13935 PF00682 HMGL-like LCH97_13955 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LCH97_13970 PF02630 SCO1/SenC LCH97_13975 PF07238 PilZ domain LCH97_13975 PF07317 Flagellar regulator YcgR LCH97_13980 PF01634 ATP phosphoribosyltransferase LCH97_13985 PF00815 Histidinol dehydrogenase LCH97_13995 PF00155 Aminotransferase class I and II LCH97_14000 PF00475 Imidazoleglycerol-phosphate dehydratase LCH97_14005 PF00117 Glutamine amidotransferase class-I LCH97_14010 PF00977 Histidine biosynthesis protein LCH97_14015 PF00977 Histidine biosynthesis protein LCH97_14020 PF01502 Phosphoribosyl-AMP cyclohydrolase LCH97_14025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LCH97_14035 PF02416 mttA/Hcf106 family LCH97_14040 PF02416 mttA/Hcf106 family LCH97_14045 PF00902 Sec-independent protein translocase protein (TatC) LCH97_14055 PF03412 Peptidase C39 family LCH97_14055 PF00005 ABC transporter LCH97_14055 PF00664 ABC transporter transmembrane region LCH97_14060 PF00529 HlyD membrane-fusion protein of T1SS LCH97_14060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH97_14065 PF00196 Bacterial regulatory proteins, luxR family LCH97_14080 PF12792 CSS motif domain associated with EAL LCH97_14080 PF00563 EAL domain LCH97_14085 PF04972 BON domain LCH97_14090 PF13580 SIS domain LCH97_14095 PF02021 Uncharacterised protein family UPF0102 LCH97_14105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH97_14115 PF13737 Transposase DDE domain LCH97_14120 PF01026 TatD related DNase LCH97_14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_14125 PF00672 HAMP domain LCH97_14125 PF12729 Four helix bundle sensory module for signal transduction LCH97_14130 PF00691 OmpA family LCH97_14130 PF01389 OmpA-like transmembrane domain LCH97_14140 PF00563 EAL domain LCH97_14140 PF00990 Diguanylate cyclase, GGDEF domain LCH97_14140 PF13426 PAS domain LCH97_14150 PF01980 tRNA-methyltransferase O LCH97_14150 PF18389 TrmO C-terminal domain LCH97_14160 PF01134 Glucose inhibited division protein A LCH97_14160 PF13932 GidA associated domain LCH97_14165 PF02527 rRNA small subunit methyltransferase G LCH97_14170 PF13614 AAA domain LCH97_14175 PF02195 ParB-like nuclease domain LCH97_14175 PF17762 HTH domain found in ParB protein LCH97_14185 PF00119 ATP synthase A chain LCH97_14190 PF00137 ATP synthase subunit C LCH97_14195 PF00430 ATP synthase B/B' CF(0) LCH97_14200 PF00213 ATP synthase delta (OSCP) subunit LCH97_14205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH97_14205 PF00306 ATP synthase alpha/beta chain, C terminal domain LCH97_14205 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCH97_14210 PF00231 ATP synthase LCH97_14215 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCH97_14215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCH97_14220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LCH97_14220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LCH97_14225 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_14225 PF12804 MobA-like NTP transferase domain LCH97_14225 PF14602 Hexapeptide repeat of succinyl-transferase LCH97_14230 PF08220 DeoR-like helix-turn-helix domain LCH97_14230 PF00455 DeoR C terminal sensor domain LCH97_14235 PF01380 SIS domain LCH97_14240 PF13737 Transposase DDE domain LCH97_14250 PF03831 PhnA domain LCH97_14250 PF08274 PhnA Zinc-Ribbon LCH97_14260 PF00326 Prolyl oligopeptidase family LCH97_14260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LCH97_14270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_14270 PF03466 LysR substrate binding domain LCH97_14285 PF01925 Sulfite exporter TauE/SafE LCH97_14290 PF01212 Beta-eliminating lyase LCH97_14305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_14305 PF00672 HAMP domain LCH97_14305 PF02203 Tar ligand binding domain homologue LCH97_14310 PF00899 ThiF family LCH97_14320 PF12729 Four helix bundle sensory module for signal transduction LCH97_14320 PF00672 HAMP domain LCH97_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_14330 PF02545 Maf-like protein LCH97_14335 PF10150 Ribonuclease E/G family LCH97_14335 PF00575 S1 RNA binding domain LCH97_14340 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_14340 PF06426 Serine acetyltransferase, N-terminal LCH97_14360 PF00583 Acetyltransferase (GNAT) family LCH97_14385 PF01171 PP-loop family LCH97_14395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCH97_14395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCH97_14400 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_14405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH97_14420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH97_14430 PF13439 Glycosyltransferase Family 4 LCH97_14430 PF00534 Glycosyl transferases group 1 LCH97_14460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH97_14465 PF02397 Bacterial sugar transferase LCH97_14475 PF02719 Polysaccharide biosynthesis protein LCH97_14490 PF03551 Transcriptional regulator PadR-like family LCH97_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_14500 PF03466 LysR substrate binding domain LCH97_14505 PF10415 Fumarase C C-terminus LCH97_14505 PF00206 Lyase LCH97_14510 PF00375 Sodium:dicarboxylate symporter family LCH97_14520 PF04320 Protein with unknown function (DUF469) LCH97_14530 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LCH97_14535 PF03922 OmpW family LCH97_14585 PF00156 Phosphoribosyl transferase domain LCH97_14590 PF03372 Endonuclease/Exonuclease/phosphatase family LCH97_14600 PF00581 Rhodanese-like domain LCH97_14615 PF01218 Coproporphyrinogen III oxidase LCH97_14620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_14620 PF02743 Cache domain LCH97_14620 PF00672 HAMP domain LCH97_14625 PF00072 Response regulator receiver domain LCH97_14635 PF07194 P2 response regulator binding domain LCH97_14635 PF01627 Hpt domain LCH97_14635 PF01584 CheW-like domain LCH97_14635 PF02895 Signal transducing histidine kinase, homodimeric domain LCH97_14635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_14645 PF01584 CheW-like domain LCH97_14650 PF01739 CheR methyltransferase, SAM binding domain LCH97_14650 PF03705 CheR methyltransferase, all-alpha domain LCH97_14655 PF03975 CheD chemotactic sensory transduction LCH97_14660 PF00072 Response regulator receiver domain LCH97_14660 PF01339 CheB methylesterase LCH97_14665 PF00563 EAL domain LCH97_14665 PF00990 Diguanylate cyclase, GGDEF domain LCH97_14665 PF13426 PAS domain LCH97_14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_14675 PF00512 His Kinase A (phospho-acceptor) domain LCH97_14675 PF00672 HAMP domain LCH97_14680 PF00072 Response regulator receiver domain LCH97_14680 PF00486 Transcriptional regulatory protein, C terminal LCH97_14690 PF01636 Phosphotransferase enzyme family LCH97_14700 PF03641 Possible lysine decarboxylase LCH97_14705 PF00476 DNA polymerase family A LCH97_14705 PF01367 5'-3' exonuclease, C-terminal SAM fold LCH97_14705 PF01612 3'-5' exonuclease LCH97_14705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCH97_14715 PF00990 Diguanylate cyclase, GGDEF domain LCH97_14720 PF00990 Diguanylate cyclase, GGDEF domain LCH97_14720 PF00072 Response regulator receiver domain LCH97_14725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH97_14725 PF10414 Sirohaem synthase dimerisation region LCH97_14735 PF00381 PTS HPr component phosphorylation site LCH97_14740 PF02896 PEP-utilising enzyme, TIM barrel domain LCH97_14740 PF00391 PEP-utilising enzyme, mobile domain LCH97_14740 PF05524 PEP-utilising enzyme, N-terminal LCH97_14745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LCH97_14750 PF13439 Glycosyltransferase Family 4 LCH97_14750 PF00534 Glycosyl transferases group 1 LCH97_14765 PF13439 Glycosyltransferase Family 4 LCH97_14765 PF00534 Glycosyl transferases group 1 LCH97_14770 PF00664 ABC transporter transmembrane region LCH97_14770 PF00005 ABC transporter LCH97_14795 PF01761 3-dehydroquinate synthase LCH97_14800 PF01202 Shikimate kinase LCH97_14805 PF00263 Bacterial type II and III secretion system protein LCH97_14805 PF03958 Bacterial type II/III secretion system short domain LCH97_14805 PF07660 Secretin and TonB N terminus short domain LCH97_14805 PF11741 AMIN domain LCH97_14815 PF04350 Pilus assembly protein, PilO LCH97_14825 PF11104 Type IV pilus assembly protein PilM; LCH97_14830 PF17092 Penicillin-binding protein OB-like domain LCH97_14830 PF00912 Transglycosylase LCH97_14830 PF00905 Penicillin binding protein transpeptidase domain LCH97_14835 PF03960 ArsC family LCH97_14840 PF07690 Major Facilitator Superfamily LCH97_14850 PF01794 Ferric reductase like transmembrane component LCH97_14855 PF00174 Oxidoreductase molybdopterin binding domain LCH97_14865 PF00561 alpha/beta hydrolase fold LCH97_14870 PF00561 alpha/beta hydrolase fold LCH97_14870 PF07021 Methionine biosynthesis protein MetW LCH97_14875 PF07690 Major Facilitator Superfamily LCH97_14885 PF00912 Transglycosylase LCH97_14885 PF00905 Penicillin binding protein transpeptidase domain LCH97_14890 PF00293 NUDIX domain LCH97_14895 PF03358 NADPH-dependent FMN reductase LCH97_14900 PF03631 Virulence factor BrkB LCH97_14915 PF00348 Polyprenyl synthetase LCH97_14920 PF00829 Ribosomal prokaryotic L21 protein LCH97_14925 PF01016 Ribosomal L27 protein LCH97_14930 PF01018 GTP1/OBG LCH97_14930 PF01926 50S ribosome-binding GTPase LCH97_14945 PF06470 SMC proteins Flexible Hinge Domain LCH97_14945 PF02463 RecF/RecN/SMC N terminal domain LCH97_14950 PF01435 Peptidase family M48 LCH97_14960 PF00753 Metallo-beta-lactamase superfamily LCH97_14975 PF00155 Aminotransferase class I and II LCH97_14980 PF02627 Carboxymuconolactone decarboxylase family LCH97_14985 PF08534 Redoxin LCH97_14995 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_15000 PF01432 Peptidase family M3 LCH97_15020 PF01810 LysE type translocator LCH97_15030 PF00313 'Cold-shock' DNA-binding domain LCH97_15035 PF07509 Protein of unknown function (DUF1523) LCH97_15040 PF00445 Ribonuclease T2 family LCH97_15045 PF01734 Patatin-like phospholipase LCH97_15050 PF13439 Glycosyltransferase Family 4 LCH97_15050 PF00534 Glycosyl transferases group 1 LCH97_15060 PF08019 Phosphoethanolamine transferase EptA/EptB LCH97_15060 PF00884 Sulfatase LCH97_15065 PF02954 Bacterial regulatory protein, Fis family LCH97_15065 PF00072 Response regulator receiver domain LCH97_15065 PF00158 Sigma-54 interaction domain LCH97_15075 PF01654 Cytochrome bd terminal oxidase subunit I LCH97_15080 PF02322 Cytochrome bd terminal oxidase subunit II LCH97_15120 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_15125 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_15130 PF00005 ABC transporter LCH97_15130 PF12857 TOBE-like domain LCH97_15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_15135 PF03466 LysR substrate binding domain LCH97_15150 PF03466 LysR substrate binding domain LCH97_15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_15155 PF00175 Oxidoreductase NAD-binding domain LCH97_15155 PF00970 Oxidoreductase FAD-binding domain LCH97_15160 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH97_15170 PF00072 Response regulator receiver domain LCH97_15180 PF02913 FAD linked oxidases, C-terminal domain LCH97_15180 PF01565 FAD binding domain LCH97_15200 PF00171 Aldehyde dehydrogenase family LCH97_15205 PF03060 Nitronate monooxygenase LCH97_15210 PF03472 Autoinducer binding domain LCH97_15210 PF00196 Bacterial regulatory proteins, luxR family LCH97_15215 PF03466 LysR substrate binding domain LCH97_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_15220 PF01266 FAD dependent oxidoreductase LCH97_15230 PF17946 RecC C-terminal domain LCH97_15235 PF12705 PD-(D/E)XK nuclease superfamily LCH97_15235 PF00580 UvrD/REP helicase N-terminal domain LCH97_15235 PF13361 UvrD-like helicase C-terminal domain LCH97_15245 PF03976 Polyphosphate kinase 2 (PPK2) LCH97_15250 PF13538 UvrD-like helicase C-terminal domain LCH97_15275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH97_15285 PF13361 UvrD-like helicase C-terminal domain LCH97_15285 PF00580 UvrD/REP helicase N-terminal domain LCH97_15290 PF00149 Calcineurin-like phosphoesterase LCH97_15295 PF00375 Sodium:dicarboxylate symporter family LCH97_15300 PF01553 Acyltransferase LCH97_15305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LCH97_15305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LCH97_15305 PF06827 Zinc finger found in FPG and IleRS LCH97_15315 PF03550 Outer membrane lipoprotein LolB LCH97_15320 PF08544 GHMP kinases C terminal LCH97_15320 PF00288 GHMP kinases N terminal domain LCH97_15335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCH97_15335 PF14572 Phosphoribosyl synthetase-associated domain LCH97_15340 PF01386 Ribosomal L25p family LCH97_15345 PF01195 Peptidyl-tRNA hydrolase LCH97_15350 PF01926 50S ribosome-binding GTPase LCH97_15350 PF06071 Protein of unknown function (DUF933) LCH97_15360 PF01207 Dihydrouridine synthase (Dus) LCH97_15365 PF01725 Ham1 family LCH97_15370 PF06969 HemN C-terminal domain LCH97_15370 PF04055 Radical SAM superfamily LCH97_15375 PF01042 Endoribonuclease L-PSP LCH97_15380 PF00375 Sodium:dicarboxylate symporter family LCH97_15385 PF02567 Phenazine biosynthesis-like protein LCH97_15395 PF00270 DEAD/DEAH box helicase LCH97_15395 PF17191 RecG wedge domain LCH97_15395 PF00271 Helicase conserved C-terminal domain LCH97_15400 PF01384 Phosphate transporter family LCH97_15405 PF00005 ABC transporter LCH97_15410 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_15415 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_15420 PF12849 PBP superfamily domain LCH97_15425 PF00121 Triosephosphate isomerase LCH97_15430 PF03840 Preprotein translocase SecG subunit LCH97_15440 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LCH97_15445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCH97_15450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LCH97_15455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LCH97_15465 PF10531 SLBB domain LCH97_15465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCH97_15465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCH97_15470 PF00384 Molybdopterin oxidoreductase LCH97_15470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCH97_15470 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LCH97_15475 PF00146 NADH dehydrogenase LCH97_15480 PF12838 4Fe-4S dicluster domain LCH97_15485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LCH97_15490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCH97_15495 PF00361 Proton-conducting membrane transporter LCH97_15495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCH97_15500 PF00361 Proton-conducting membrane transporter LCH97_15500 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LCH97_15505 PF00361 Proton-conducting membrane transporter LCH97_15515 PF03279 Bacterial lipid A biosynthesis acyltransferase LCH97_15525 PF00438 S-adenosylmethionine synthetase, N-terminal domain LCH97_15525 PF02772 S-adenosylmethionine synthetase, central domain LCH97_15525 PF02773 S-adenosylmethionine synthetase, C-terminal domain LCH97_15530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LCH97_15530 PF05221 S-adenosyl-L-homocysteine hydrolase LCH97_15535 PF02219 Methylenetetrahydrofolate reductase LCH97_15540 PF13426 PAS domain LCH97_15540 PF08448 PAS fold LCH97_15540 PF08447 PAS fold LCH97_15540 PF05231 MASE1 LCH97_15540 PF00990 Diguanylate cyclase, GGDEF domain LCH97_15540 PF00563 EAL domain LCH97_15545 PF01037 Lrp/AsnC ligand binding domain LCH97_15550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH97_15560 PF02798 Glutathione S-transferase, N-terminal domain LCH97_15560 PF14497 Glutathione S-transferase, C-terminal domain LCH97_15620 PF00483 Nucleotidyl transferase LCH97_15620 PF01050 Mannose-6-phosphate isomerase LCH97_15625 PF16363 GDP-mannose 4,6 dehydratase LCH97_15630 PF01370 NAD dependent epimerase/dehydratase family LCH97_15635 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH97_15640 PF00175 Oxidoreductase NAD-binding domain LCH97_15640 PF00970 Oxidoreductase FAD-binding domain LCH97_15640 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH97_15645 PF00483 Nucleotidyl transferase LCH97_15650 PF16363 GDP-mannose 4,6 dehydratase LCH97_15655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCH97_15660 PF00456 Transketolase, thiamine diphosphate binding domain LCH97_15665 PF02779 Transketolase, pyrimidine binding domain LCH97_15665 PF02780 Transketolase, C-terminal domain LCH97_15690 PF00535 Glycosyl transferase family 2 LCH97_15705 PF00535 Glycosyl transferase family 2 LCH97_15720 PF01914 MarC family integral membrane protein LCH97_15725 PF02926 THUMP domain LCH97_15725 PF01170 Putative RNA methylase family UPF0020 LCH97_15730 PF00730 HhH-GPD superfamily base excision DNA repair protein LCH97_15730 PF14815 NUDIX domain LCH97_15730 PF00633 Helix-hairpin-helix motif LCH97_15735 PF13291 ACT domain LCH97_15735 PF04607 Region found in RelA / SpoT proteins LCH97_15735 PF02824 TGS domain LCH97_15740 PF01791 DeoC/LacD family aldolase LCH97_15745 PF01676 Metalloenzyme superfamily LCH97_15750 PF01048 Phosphorylase superfamily LCH97_15755 PF00572 Ribosomal protein L13 LCH97_15760 PF00380 Ribosomal protein S9/S16 LCH97_15765 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCH97_15765 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCH97_15770 PF01521 Iron-sulphur cluster biosynthesis LCH97_15775 PF03705 CheR methyltransferase, all-alpha domain LCH97_15775 PF01739 CheR methyltransferase, SAM binding domain LCH97_15780 PF01266 FAD dependent oxidoreductase LCH97_15790 PF02152 Dihydroneopterin aldolase LCH97_15795 PF02660 Glycerol-3-phosphate acyltransferase LCH97_15800 PF01327 Polypeptide deformylase LCH97_15805 PF00850 Histone deacetylase domain LCH97_15810 PF07726 ATPase family associated with various cellular activities (AAA) LCH97_15810 PF17863 AAA lid domain LCH97_15820 PF13559 Domain of unknown function (DUF4129) LCH97_15820 PF01841 Transglutaminase-like superfamily LCH97_15820 PF11992 Domain of unknown function (DUF3488) LCH97_15825 PF00140 Sigma-70 factor, region 1.2 LCH97_15825 PF04545 Sigma-70, region 4 LCH97_15825 PF04542 Sigma-70 region 2 LCH97_15825 PF04539 Sigma-70 region 3 LCH97_15830 PF01551 Peptidase family M23 LCH97_15830 PF01476 LysM domain LCH97_15840 PF01975 Survival protein SurE LCH97_15845 PF02445 Quinolinate synthetase A protein LCH97_15850 PF00583 Acetyltransferase (GNAT) family LCH97_15850 PF13380 CoA binding domain LCH97_15850 PF13607 Succinyl-CoA ligase like flavodoxin domain LCH97_15855 PF00886 Ribosomal protein S16 LCH97_15860 PF01782 RimM N-terminal domain LCH97_15860 PF05239 PRC-barrel domain LCH97_15865 PF01746 tRNA (Guanine-1)-methyltransferase LCH97_15870 PF01245 Ribosomal protein L19 LCH97_15875 PF00589 Phage integrase family LCH97_15875 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_15880 PF07724 AAA domain (Cdc48 subfamily) LCH97_15880 PF00004 ATPase family associated with various cellular activities (AAA) LCH97_15880 PF10431 C-terminal, D2-small domain, of ClpB protein LCH97_15880 PF02861 Clp amino terminal domain, pathogenicity island component LCH97_15880 PF17871 AAA lid domain LCH97_15885 PF02617 ATP-dependent Clp protease adaptor protein ClpS LCH97_15890 PF00313 'Cold-shock' DNA-binding domain LCH97_15895 PF07690 Major Facilitator Superfamily LCH97_15905 PF00180 Isocitrate/isopropylmalate dehydrogenase LCH97_15910 PF03971 Monomeric isocitrate dehydrogenase LCH97_15915 PF00849 RNA pseudouridylate synthase LCH97_15920 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LCH97_15930 PF01624 MutS domain I LCH97_15930 PF05188 MutS domain II LCH97_15930 PF05192 MutS domain III LCH97_15930 PF05190 MutS family domain IV LCH97_15930 PF00488 MutS domain V LCH97_15935 PF00990 Diguanylate cyclase, GGDEF domain LCH97_15945 PF01654 Cytochrome bd terminal oxidase subunit I LCH97_15950 PF02322 Cytochrome bd terminal oxidase subunit II LCH97_15965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCH97_15965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCH97_15985 PF01758 Sodium Bile acid symporter family LCH97_16000 PF13737 Transposase DDE domain LCH97_16005 PF00672 HAMP domain LCH97_16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_16005 PF00512 His Kinase A (phospho-acceptor) domain LCH97_16010 PF00486 Transcriptional regulatory protein, C terminal LCH97_16010 PF00072 Response regulator receiver domain LCH97_16020 PF07732 Multicopper oxidase LCH97_16020 PF07731 Multicopper oxidase LCH97_16035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH97_16035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LCH97_16045 PF03824 High-affinity nickel-transport protein LCH97_16055 PF12729 Four helix bundle sensory module for signal transduction LCH97_16055 PF00672 HAMP domain LCH97_16055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_16060 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LCH97_16070 PF02391 MoaE protein LCH97_16075 PF07690 Major Facilitator Superfamily LCH97_16080 PF07690 Major Facilitator Superfamily LCH97_16085 PF00384 Molybdopterin oxidoreductase LCH97_16085 PF01568 Molydopterin dinucleotide binding domain LCH97_16085 PF14710 Respiratory nitrate reductase alpha N-terminal LCH97_16090 PF13247 4Fe-4S dicluster domain LCH97_16090 PF14711 Respiratory nitrate reductase beta C-terminal LCH97_16095 PF02613 Nitrate reductase delta subunit LCH97_16100 PF02665 Nitrate reductase gamma subunit LCH97_16105 PF00994 Probable molybdopterin binding domain LCH97_16105 PF03453 MoeA N-terminal region (domain I and II) LCH97_16105 PF03454 MoeA C-terminal region (domain IV) LCH97_16110 PF01967 MoaC family LCH97_16125 PF00196 Bacterial regulatory proteins, luxR family LCH97_16125 PF00072 Response regulator receiver domain LCH97_16130 PF00672 HAMP domain LCH97_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_16130 PF07730 Histidine kinase LCH97_16130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LCH97_16135 PF00484 Carbonic anhydrase LCH97_16140 PF06463 Molybdenum Cofactor Synthesis C LCH97_16140 PF04055 Radical SAM superfamily LCH97_16155 PF10414 Sirohaem synthase dimerisation region LCH97_16155 PF14824 Sirohaem biosynthesis protein central LCH97_16155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH97_16160 PF00034 Cytochrome c LCH97_16165 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCH97_16170 PF00510 Cytochrome c oxidase subunit III LCH97_16180 PF08406 CbbQ/NirQ/NorQ C-terminal LCH97_16180 PF07728 AAA domain (dynein-related subfamily) LCH97_16200 PF00034 Cytochrome c LCH97_16205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCH97_16215 PF17805 AsnC-like ligand binding domain LCH97_16215 PF13404 AsnC-type helix-turn-helix domain LCH97_16220 PF13404 AsnC-type helix-turn-helix domain LCH97_16220 PF17805 AsnC-like ligand binding domain LCH97_16250 PF01136 Peptidase family U32 LCH97_16260 PF02036 SCP-2 sterol transfer family LCH97_16265 PF08402 TOBE domain LCH97_16265 PF00005 ABC transporter LCH97_16270 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_16315 PF01926 50S ribosome-binding GTPase LCH97_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_16330 PF03459 TOBE domain LCH97_16340 PF00005 ABC transporter LCH97_16340 PF03459 TOBE domain LCH97_16345 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_16355 PF00589 Phage integrase family LCH97_16355 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_16380 PF13737 Transposase DDE domain LCH97_16395 PF00140 Sigma-70 factor, region 1.2 LCH97_16395 PF04546 Sigma-70, non-essential region LCH97_16395 PF04542 Sigma-70 region 2 LCH97_16395 PF04539 Sigma-70 region 3 LCH97_16395 PF04545 Sigma-70, region 4 LCH97_16395 PF03979 Sigma-70 factor, region 1.1 LCH97_16400 PF10410 DnaB-helicase binding domain of primase LCH97_16400 PF08278 DNA primase DnaG DnaB-binding LCH97_16400 PF08275 DNA primase catalytic core, N-terminal domain LCH97_16400 PF01807 CHC2 zinc finger LCH97_16410 PF01165 Ribosomal protein S21 LCH97_16415 PF05690 Thiazole biosynthesis protein ThiG LCH97_16420 PF02597 ThiS family LCH97_16420 PF05690 Thiazole biosynthesis protein ThiG LCH97_16425 PF13291 ACT domain LCH97_16425 PF04607 Region found in RelA / SpoT proteins LCH97_16425 PF02824 TGS domain LCH97_16430 PF01192 RNA polymerase Rpb6 LCH97_16435 PF00625 Guanylate kinase LCH97_16440 PF00860 Permease family LCH97_16445 PF00156 Phosphoribosyl transferase domain LCH97_16450 PF00672 HAMP domain LCH97_16450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_16455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCH97_16465 PF01061 ABC-2 type transporter LCH97_16470 PF00005 ABC transporter LCH97_16475 PF08361 MAATS-type transcriptional repressor, C-terminal region LCH97_16475 PF00440 Bacterial regulatory proteins, tetR family LCH97_16480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCH97_16485 PF00873 AcrB/AcrD/AcrF family LCH97_16490 PF02321 Outer membrane efflux protein LCH97_16495 PF00664 ABC transporter transmembrane region LCH97_16495 PF00005 ABC transporter LCH97_16500 PF00005 ABC transporter LCH97_16500 PF00664 ABC transporter transmembrane region LCH97_16520 PF02470 MlaD protein LCH97_16525 PF02405 Permease MlaE LCH97_16530 PF00005 ABC transporter LCH97_16535 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LCH97_16535 PF14602 Hexapeptide repeat of succinyl-transferase LCH97_16535 PF00132 Bacterial transferase hexapeptide (six repeats) LCH97_16540 PF00155 Aminotransferase class I and II LCH97_16570 PF04102 SlyX LCH97_16575 PF03553 Na+/H+ antiporter family LCH97_16575 PF13726 Na+-H+ antiporter family LCH97_16585 PF01145 SPFH domain / Band 7 family LCH97_16585 PF15975 Flotillin LCH97_16590 PF07290 Protein of unknown function (DUF1449) LCH97_16615 PF04445 Putative SAM-dependent methyltransferase LCH97_16620 PF03772 Competence protein LCH97_16620 PF00753 Metallo-beta-lactamase superfamily LCH97_16625 PF00486 Transcriptional regulatory protein, C terminal LCH97_16625 PF00072 Response regulator receiver domain LCH97_16630 PF00512 His Kinase A (phospho-acceptor) domain LCH97_16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_16635 PF13614 AAA domain LCH97_16645 PF00270 DEAD/DEAH box helicase LCH97_16645 PF00271 Helicase conserved C-terminal domain LCH97_16645 PF00570 HRDC domain LCH97_16645 PF16124 RecQ zinc-binding LCH97_16645 PF09382 RQC domain LCH97_16650 PF01960 ArgJ family LCH97_16685 PF08267 Cobalamin-independent synthase, N-terminal domain LCH97_16685 PF01717 Cobalamin-independent synthase, Catalytic domain LCH97_16690 PF03466 LysR substrate binding domain LCH97_16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_16695 PF13673 Acetyltransferase (GNAT) domain LCH97_16700 PF02954 Bacterial regulatory protein, Fis family LCH97_16700 PF00072 Response regulator receiver domain LCH97_16700 PF00158 Sigma-54 interaction domain LCH97_16705 PF00512 His Kinase A (phospho-acceptor) domain LCH97_16705 PF00989 PAS fold LCH97_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_16715 PF00120 Glutamine synthetase, catalytic domain LCH97_16715 PF03951 Glutamine synthetase, beta-Grasp domain LCH97_16725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LCH97_16725 PF01488 Shikimate / quinate 5-dehydrogenase LCH97_16725 PF08501 Shikimate dehydrogenase substrate binding domain LCH97_16730 PF00912 Transglycosylase LCH97_16735 PF01769 Divalent cation transporter LCH97_16735 PF00571 CBS domain LCH97_16735 PF03448 MgtE intracellular N domain LCH97_16740 PF05175 Methyltransferase small domain LCH97_16740 PF17827 PrmC N-terminal domain LCH97_16750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH97_16755 PF08007 Cupin superfamily protein LCH97_16770 PF09335 SNARE associated Golgi protein LCH97_16775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCH97_16785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCH97_16785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCH97_16790 PF01266 FAD dependent oxidoreductase LCH97_16790 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LCH97_16820 PF00106 short chain dehydrogenase LCH97_16830 PF13411 MerR HTH family regulatory protein LCH97_16830 PF02607 B12 binding domain LCH97_16840 PF00255 Glutathione peroxidase LCH97_16845 PF02390 Putative methyltransferase LCH97_16855 PF00970 Oxidoreductase FAD-binding domain LCH97_16855 PF00111 2Fe-2S iron-sulfur cluster binding domain LCH97_16855 PF00175 Oxidoreductase NAD-binding domain LCH97_16870 PF00459 Inositol monophosphatase family LCH97_16875 PF00588 SpoU rRNA Methylase family LCH97_16890 PF00027 Cyclic nucleotide-binding domain LCH97_16890 PF13545 Crp-like helix-turn-helix domain LCH97_16895 PF06969 HemN C-terminal domain LCH97_16895 PF04055 Radical SAM superfamily LCH97_16900 PF06804 NlpB/DapX lipoprotein LCH97_16905 PF00701 Dihydrodipicolinate synthetase family LCH97_16910 PF00005 ABC transporter LCH97_16910 PF12848 ABC transporter LCH97_16920 PF03466 LysR substrate binding domain LCH97_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_16925 PF01507 Phosphoadenosine phosphosulfate reductase family LCH97_16940 PF00691 OmpA family LCH97_16945 PF06574 FAD synthetase LCH97_16945 PF01687 Riboflavin kinase LCH97_16950 PF06827 Zinc finger found in FPG and IleRS LCH97_16950 PF08264 Anticodon-binding domain of tRNA LCH97_16950 PF00133 tRNA synthetases class I (I, L, M and V) LCH97_16955 PF01252 Signal peptidase (SPase) II LCH97_16960 PF02401 LytB protein LCH97_16970 PF01256 Carbohydrate kinase LCH97_16975 PF02441 Flavoprotein LCH97_16990 PF03668 P-loop ATPase protein family LCH97_16995 PF07475 HPr Serine kinase C-terminal domain LCH97_16995 PF02603 HPr Serine kinase N terminus LCH97_17000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCH97_17010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCH97_17015 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCH97_17015 PF04552 Sigma-54, DNA binding domain LCH97_17015 PF04963 Sigma-54 factor, core binding domain LCH97_17020 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCH97_17020 PF00005 ABC transporter LCH97_17025 PF03968 OstA-like protein LCH97_17040 PF00571 CBS domain LCH97_17040 PF01380 SIS domain LCH97_17045 PF00999 Sodium/hydrogen exchanger family LCH97_17045 PF02080 TrkA-C domain LCH97_17045 PF02254 TrkA-N domain LCH97_17060 PF00209 Sodium:neurotransmitter symporter family LCH97_17065 PF17763 Glutaminase/Asparaginase C-terminal domain LCH97_17065 PF00710 Asparaginase, N-terminal LCH97_17085 PF02811 PHP domain LCH97_17090 PF01300 Telomere recombination LCH97_17095 PF02163 Peptidase family M50 LCH97_17100 PF00579 tRNA synthetases class I (W and Y) LCH97_17105 PF02616 Segregation and condensation protein ScpA LCH97_17110 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LCH97_17120 PF04079 Segregation and condensation complex subunit ScpB LCH97_17125 PF00849 RNA pseudouridylate synthase LCH97_17125 PF01479 S4 domain LCH97_17130 PF01272 Transcription elongation factor, GreA/GreB, C-term LCH97_17130 PF03449 Transcription elongation factor, N-terminal LCH97_17140 PF00392 Bacterial regulatory proteins, gntR family LCH97_17140 PF00155 Aminotransferase class I and II LCH97_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_17145 PF03466 LysR substrate binding domain LCH97_17150 PF03776 Septum formation topological specificity factor MinE LCH97_17155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCH97_17160 PF05209 Septum formation inhibitor MinC, N-terminal domain LCH97_17160 PF03775 Septum formation inhibitor MinC, C-terminal domain LCH97_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_17175 PF03466 LysR substrate binding domain LCH97_17180 PF03358 NADPH-dependent FMN reductase LCH97_17185 PF00719 Inorganic pyrophosphatase LCH97_17190 PF03232 Ubiquinone biosynthesis protein COQ7 LCH97_17200 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LCH97_17205 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LCH97_17210 PF13520 Amino acid permease LCH97_17215 PF14525 AraC-binding-like domain LCH97_17215 PF12833 Helix-turn-helix domain LCH97_17220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LCH97_17220 PF12833 Helix-turn-helix domain LCH97_17225 PF13737 Transposase DDE domain LCH97_17230 PF13332 Hemagglutinin repeat LCH97_17230 PF05860 haemagglutination activity domain LCH97_17240 PF00009 Elongation factor Tu GTP binding domain LCH97_17245 PF01507 Phosphoadenosine phosphosulfate reductase family LCH97_17250 PF00072 Response regulator receiver domain LCH97_17255 PF00672 HAMP domain LCH97_17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17255 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17255 PF01627 Hpt domain LCH97_17255 PF00072 Response regulator receiver domain LCH97_17255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH97_17290 PF03618 Kinase/pyrophosphorylase LCH97_17295 PF00391 PEP-utilising enzyme, mobile domain LCH97_17295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LCH97_17295 PF02896 PEP-utilising enzyme, TIM barrel domain LCH97_17300 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LCH97_17305 PF05681 Fumarate hydratase (Fumerase) LCH97_17305 PF05683 Fumarase C-terminus LCH97_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17315 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17315 PF00672 HAMP domain LCH97_17320 PF00072 Response regulator receiver domain LCH97_17320 PF00486 Transcriptional regulatory protein, C terminal LCH97_17330 PF00672 HAMP domain LCH97_17330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17330 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17335 PF00072 Response regulator receiver domain LCH97_17335 PF00486 Transcriptional regulatory protein, C terminal LCH97_17350 PF06906 Protein of unknown function (DUF1272) LCH97_17355 PF00892 EamA-like transporter family LCH97_17375 PF01965 DJ-1/PfpI family LCH97_17385 PF00196 Bacterial regulatory proteins, luxR family LCH97_17385 PF00072 Response regulator receiver domain LCH97_17390 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17390 PF08521 Two-component sensor kinase N-terminal LCH97_17400 PF05971 RNA methyltransferase LCH97_17410 PF00563 EAL domain LCH97_17410 PF00990 Diguanylate cyclase, GGDEF domain LCH97_17410 PF03707 Bacterial signalling protein N terminal repeat LCH97_17415 PF00271 Helicase conserved C-terminal domain LCH97_17415 PF00270 DEAD/DEAH box helicase LCH97_17430 PF00990 Diguanylate cyclase, GGDEF domain LCH97_17430 PF00072 Response regulator receiver domain LCH97_17435 PF01627 Hpt domain LCH97_17435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCH97_17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17435 PF00072 Response regulator receiver domain LCH97_17435 PF00672 HAMP domain LCH97_17435 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17440 PF02091 Glycyl-tRNA synthetase alpha subunit LCH97_17450 PF05746 DALR anticodon binding domain LCH97_17450 PF02092 Glycyl-tRNA synthetase beta subunit LCH97_17470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCH97_17480 PF02875 Mur ligase family, glutamate ligase domain LCH97_17480 PF08245 Mur ligase middle domain LCH97_17480 PF01225 Mur ligase family, catalytic domain LCH97_17485 PF05230 MASE2 domain LCH97_17485 PF00990 Diguanylate cyclase, GGDEF domain LCH97_17510 PF05114 Protein of unknown function (DUF692) LCH97_17535 PF06508 Queuosine biosynthesis protein QueC LCH97_17540 PF00781 Diacylglycerol kinase catalytic domain LCH97_17545 PF00455 DeoR C terminal sensor domain LCH97_17545 PF08220 DeoR-like helix-turn-helix domain LCH97_17550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LCH97_17550 PF01266 FAD dependent oxidoreductase LCH97_17555 PF00230 Major intrinsic protein LCH97_17560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCH97_17560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCH97_17570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCH97_17575 PF00881 Nitroreductase family LCH97_17580 PF16925 Tetracyclin repressor-like, C-terminal domain LCH97_17580 PF00440 Bacterial regulatory proteins, tetR family LCH97_17590 PF00563 EAL domain LCH97_17590 PF12792 CSS motif domain associated with EAL LCH97_17600 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_17605 PF00005 ABC transporter LCH97_17605 PF03459 TOBE domain LCH97_17610 PF03459 TOBE domain LCH97_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_17615 PF03928 Haem-degrading LCH97_17620 PF03109 ABC1 family LCH97_17645 PF02417 Chromate transporter LCH97_17650 PF03466 LysR substrate binding domain LCH97_17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_17655 PF00672 HAMP domain LCH97_17655 PF02743 Cache domain LCH97_17655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_17660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCH97_17660 PF00005 ABC transporter LCH97_17670 PF00528 Binding-protein-dependent transport system inner membrane component LCH97_17675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCH97_17680 PF00005 ABC transporter LCH97_17685 PF01032 FecCD transport family LCH97_17690 PF01497 Periplasmic binding protein LCH97_17695 PF03814 Potassium-transporting ATPase A subunit LCH97_17705 PF02669 K+-transporting ATPase, c chain LCH97_17710 PF13493 Domain of unknown function (DUF4118) LCH97_17710 PF13492 GAF domain LCH97_17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCH97_17710 PF00512 His Kinase A (phospho-acceptor) domain LCH97_17710 PF02702 Osmosensitive K+ channel His kinase sensor domain LCH97_17715 PF00072 Response regulator receiver domain LCH97_17715 PF00486 Transcriptional regulatory protein, C terminal LCH97_17725 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH97_17730 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH97_17735 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH97_17740 PF13416 Bacterial extracellular solute-binding protein LCH97_17745 PF00795 Carbon-nitrogen hydrolase LCH97_17750 PF04371 Porphyromonas-type peptidyl-arginine deiminase LCH97_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCH97_17755 PF03466 LysR substrate binding domain LCH97_17775 PF00155 Aminotransferase class I and II LCH97_17785 PF04011 LemA family LCH97_17795 PF00990 Diguanylate cyclase, GGDEF domain LCH97_17800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCH97_17805 PF02545 Maf-like protein LCH97_17810 PF02620 Large ribosomal RNA subunit accumulation protein YceD LCH97_17815 PF01783 Ribosomal L32p protein family LCH97_17850 PF13361 UvrD-like helicase C-terminal domain LCH97_17850 PF00580 UvrD/REP helicase N-terminal domain LCH97_17860 PF00563 EAL domain LCH97_17860 PF00990 Diguanylate cyclase, GGDEF domain LCH97_17860 PF03707 Bacterial signalling protein N terminal repeat LCH97_17860 PF13188 PAS domain LCH97_17890 PF01751 Toprim domain LCH97_17890 PF01396 Topoisomerase DNA binding C4 zinc finger LCH97_17890 PF01131 DNA topoisomerase LCH97_18015 PF02899 Phage integrase, N-terminal SAM-like domain LCH97_18015 PF00589 Phage integrase family LCH97_18065 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCH97_18075 PF00816 H-NS histone family LCH97_18100 PF01555 DNA methylase LCH97_18125 PF17191 RecG wedge domain LCH97_18125 PF00271 Helicase conserved C-terminal domain LCH97_18125 PF00270 DEAD/DEAH box helicase LCH97_18135 PF02195 ParB-like nuclease domain LCH97_18135 PF17762 HTH domain found in ParB protein LCH97_18140 PF13614 AAA domain LCH97_18205 PF13737 Transposase DDE domain LCH97_18230 PF00437 Type II/IV secretion system protein LCH97_18255 PF00263 Bacterial type II and III secretion system protein LCH97_18255 PF07655 Secretin N-terminal domain LCH97_18270 PF00437 Type II/IV secretion system protein LCH97_18290 PF00437 Type II/IV secretion system protein LCH97_18300 PF13737 Transposase DDE domain LCH97_18305 PF00589 Phage integrase family LCH97_18325 PF01751 Toprim domain LCH97_18325 PF01131 DNA topoisomerase LCH97_18405 PF13362 Toprim domain LCH97_18405 PF18818 Metallopeptidase superfamily domain LCH97_18405 PF08401 Domain of unknown function (DUF1738) LCH97_18450 PF13291 ACT domain LCH97_18450 PF02824 TGS domain LCH97_18450 PF04607 Region found in RelA / SpoT proteins LCH97_18495 PF04381 Putative exonuclease, RdgC LCH97_18565 PF04434 SWIM zinc finger LCH97_18565 PF00176 SNF2 family N-terminal domain LCH97_18565 PF00271 Helicase conserved C-terminal domain LCH97_18585 PF13737 Transposase DDE domain LCH97_18640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCH97_18640 PF08447 PAS fold LCH97_18675 PF13737 Transposase DDE domain LCH97_18685 PF06750 Bacterial Peptidase A24 N-terminal domain LCH97_18685 PF01478 Type IV leader peptidase family