locus-tag class description VMUT_0001 PF13091 PLD-like domain VMUT_0001 PF13396 Phospholipase_D-nuclease N-terminal VMUT_0006 PF00144 Beta-lactamase VMUT_0007 PF00753 Metallo-beta-lactamase superfamily VMUT_0009 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VMUT_0017 PF00378 Enoyl-CoA hydratase/isomerase VMUT_0022 PF00083 Sugar (and other) transporter VMUT_0023 PF00561 alpha/beta hydrolase fold VMUT_0024 PF00501 AMP-binding enzyme VMUT_0024 PF13193 AMP-binding enzyme C-terminal domain VMUT_0025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VMUT_0025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VMUT_0026 PF17934 Tetracyclin repressor-like, C-terminal domain VMUT_0026 PF00440 Bacterial regulatory proteins, tetR family VMUT_0027 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_0027 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_0027 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_0028 PF00501 AMP-binding enzyme VMUT_0028 PF13193 AMP-binding enzyme C-terminal domain VMUT_0032 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_0033 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_0033 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VMUT_0033 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_0036 PF01546 Peptidase family M20/M25/M40 VMUT_0036 PF07687 Peptidase dimerisation domain VMUT_0037 PF07728 AAA domain (dynein-related subfamily) VMUT_0037 PF12102 Domain of unknown function (DUF3578) VMUT_0039 PF01329 Pterin 4 alpha carbinolamine dehydratase VMUT_0041 PF00232 Glycosyl hydrolase family 1 VMUT_0056 PF13520 Amino acid permease VMUT_0059 PF04493 Endonuclease V VMUT_0060 PF02926 THUMP domain VMUT_0060 PF02568 Thiamine biosynthesis protein (ThiI) VMUT_0065 PF02543 Carbamoyltransferase N-terminus VMUT_0065 PF16861 Carbamoyltransferase C-terminus VMUT_0068 PF05050 Methyltransferase FkbM domain VMUT_0077 PF16363 GDP-mannose 4,6 dehydratase VMUT_0078 PF00483 Nucleotidyl transferase VMUT_0080 PF02511 Thymidylate synthase complementing protein VMUT_0081 PF00005 ABC transporter VMUT_0081 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_0082 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_0082 PF00005 ABC transporter VMUT_0083 PF12911 N-terminal TM domain of oligopeptide transport permease C VMUT_0083 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0084 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0086 PF00501 AMP-binding enzyme VMUT_0086 PF16177 Acetyl-coenzyme A synthetase N-terminus VMUT_0086 PF13193 AMP-binding enzyme C-terminal domain VMUT_0089 PF11838 ERAP1-like C-terminal domain VMUT_0089 PF01433 Peptidase family M1 domain VMUT_0090 PF05175 Methyltransferase small domain VMUT_0092 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VMUT_0092 PF00467 KOW motif VMUT_0095 PF00464 Serine hydroxymethyltransferase VMUT_0096 PF04679 ATP dependent DNA ligase C terminal region VMUT_0096 PF01068 ATP dependent DNA ligase domain VMUT_0096 PF04675 DNA ligase N terminus VMUT_0098 PF00294 pfkB family carbohydrate kinase VMUT_0100 PF00483 Nucleotidyl transferase VMUT_0104 PF16916 Dimerisation domain of Zinc Transporter VMUT_0104 PF01545 Cation efflux family VMUT_0107 PF01494 FAD binding domain VMUT_0108 PF05958 tRNA (Uracil-5-)-methyltransferase VMUT_0108 PF01938 TRAM domain VMUT_0109 PF00149 Calcineurin-like phosphoesterase VMUT_0113 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VMUT_0113 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VMUT_0115 PF01266 FAD dependent oxidoreductase VMUT_0115 PF04324 BFD-like [2Fe-2S] binding domain VMUT_0116 PF03009 Glycerophosphoryl diester phosphodiesterase family VMUT_0117 PF00083 Sugar (and other) transporter VMUT_0118 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VMUT_0118 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VMUT_0119 PF00155 Aminotransferase class I and II VMUT_0127 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_0127 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_0127 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_0131 PF00343 Carbohydrate phosphorylase VMUT_0132 PF02654 Cobalamin-5-phosphate synthase VMUT_0133 PF03600 Citrate transporter VMUT_0136 PF00152 tRNA synthetases class II (D, K and N) VMUT_0136 PF01336 OB-fold nucleic acid binding domain VMUT_0141 PF07690 Major Facilitator Superfamily VMUT_0144 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VMUT_0144 PF00925 GTP cyclohydrolase II VMUT_0145 PF00483 Nucleotidyl transferase VMUT_0146 PF01967 MoaC family VMUT_0147 PF02223 Thymidylate kinase VMUT_0149 PF01658 Myo-inositol-1-phosphate synthase VMUT_0150 PF06745 KaiC VMUT_0151 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_0152 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VMUT_0152 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_0152 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_0162 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VMUT_0162 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VMUT_0168 PF01370 NAD dependent epimerase/dehydratase family VMUT_0169 PF00127 Copper binding proteins, plastocyanin/azurin family VMUT_0172 PF01557 Fumarylacetoacetate (FAA) hydrolase family VMUT_0173 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0173 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VMUT_0173 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VMUT_0175 PF01008 Initiation factor 2 subunit family VMUT_0177 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VMUT_0181 PF08443 RimK-like ATP-grasp domain VMUT_0189 PF01321 Creatinase/Prolidase N-terminal domain VMUT_0189 PF00557 Metallopeptidase family M24 VMUT_0190 PF01966 HD domain VMUT_0192 PF00579 tRNA synthetases class I (W and Y) VMUT_0195 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VMUT_0195 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VMUT_0196 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VMUT_0196 PF03900 Porphobilinogen deaminase, C-terminal domain VMUT_0199 PF01112 Asparaginase VMUT_0200 PF01979 Amidohydrolase family VMUT_0204 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VMUT_0204 PF00056 lactate/malate dehydrogenase, NAD binding domain VMUT_0205 PF01300 Telomere recombination VMUT_0205 PF03481 Putative GTP-binding controlling metal-binding VMUT_0206 PF01883 Iron-sulfur cluster assembly protein VMUT_0209 PF02423 Ornithine cyclodeaminase/mu-crystallin family VMUT_0213 PF00696 Amino acid kinase family VMUT_0214 PF00348 Polyprenyl synthetase VMUT_0215 PF02803 Thiolase, C-terminal domain VMUT_0215 PF00108 Thiolase, N-terminal domain VMUT_0221 PF12704 MacB-like periplasmic core domain VMUT_0221 PF02687 FtsX-like permease family VMUT_0222 PF00919 Uncharacterized protein family UPF0004 VMUT_0222 PF04055 Radical SAM superfamily VMUT_0222 PF01938 TRAM domain VMUT_0229 PF01144 Coenzyme A transferase VMUT_0230 PF01144 Coenzyme A transferase VMUT_0234 PF00708 Acylphosphatase VMUT_0235 PF03793 PASTA domain VMUT_0235 PF00069 Protein kinase domain VMUT_0240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VMUT_0240 PF00384 Molybdopterin oxidoreductase VMUT_0240 PF01568 Molydopterin dinucleotide binding domain VMUT_0241 PF01266 FAD dependent oxidoreductase VMUT_0242 PF07969 Amidohydrolase family VMUT_0246 PF05161 MOFRL family VMUT_0246 PF13660 Domain of unknown function (DUF4147) VMUT_0254 PF02910 Fumarate reductase flavoprotein C-term VMUT_0254 PF00890 FAD binding domain VMUT_0257 PF01555 DNA methylase VMUT_0262 PF00483 Nucleotidyl transferase VMUT_0263 PF00416 Ribosomal protein S13/S18 VMUT_0266 PF01380 SIS domain VMUT_0267 PF00483 Nucleotidyl transferase VMUT_0275 PF00136 DNA polymerase family B VMUT_0275 PF03104 DNA polymerase family B, exonuclease domain VMUT_0277 PF00483 Nucleotidyl transferase VMUT_0277 PF01066 CDP-alcohol phosphatidyltransferase VMUT_0278 PF03551 Transcriptional regulator PadR-like family VMUT_0279 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VMUT_0279 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VMUT_0280 PF00753 Metallo-beta-lactamase superfamily VMUT_0280 PF00258 Flavodoxin VMUT_0281 PF00293 NUDIX domain VMUT_0281 PF01467 Cytidylyltransferase-like VMUT_0282 PF00285 Citrate synthase, C-terminal domain VMUT_0287 PF00156 Phosphoribosyl transferase domain VMUT_0292 PF02675 S-adenosylmethionine decarboxylase VMUT_0295 PF00118 TCP-1/cpn60 chaperonin family VMUT_0297 PF01926 50S ribosome-binding GTPase VMUT_0297 PF12631 MnmE helical domain VMUT_0297 PF10396 GTP-binding protein TrmE N-terminus VMUT_0301 PF01702 Queuine tRNA-ribosyltransferase VMUT_0305 PF09334 tRNA synthetases class I (M) VMUT_0305 PF01588 Putative tRNA binding domain VMUT_0305 PF08264 Anticodon-binding domain of tRNA VMUT_0306 PF00692 dUTPase VMUT_0309 PF08534 Redoxin VMUT_0310 PF00174 Oxidoreductase molybdopterin binding domain VMUT_0314 PF01507 Phosphoadenosine phosphosulfate reductase family VMUT_0316 PF00266 Aminotransferase class-V VMUT_0317 PF06508 Queuosine biosynthesis protein QueC VMUT_0318 PF03972 MmgE/PrpD family VMUT_0319 PF08676 MutL C terminal dimerisation domain VMUT_0319 PF01119 DNA mismatch repair protein, C-terminal domain VMUT_0323 PF16198 tRNA pseudouridylate synthase B C-terminal domain VMUT_0323 PF09157 Pseudouridine synthase II TruB, C-terminal VMUT_0323 PF01509 TruB family pseudouridylate synthase (N terminal domain) VMUT_0324 PF04055 Radical SAM superfamily VMUT_0324 PF13186 Iron-sulfur cluster-binding domain VMUT_0326 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VMUT_0326 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VMUT_0327 PF00282 Pyridoxal-dependent decarboxylase conserved domain VMUT_0330 PF00005 ABC transporter VMUT_0336 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VMUT_0336 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VMUT_0340 PF00005 ABC transporter VMUT_0343 PF00238 Ribosomal protein L14p/L23e VMUT_0344 PF03129 Anticodon binding domain VMUT_0344 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VMUT_0345 PF00491 Arginase family VMUT_0347 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VMUT_0349 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_0349 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_0350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_0357 PF07726 ATPase family associated with various cellular activities (AAA) VMUT_0357 PF17863 AAA lid domain VMUT_0362 PF13193 AMP-binding enzyme C-terminal domain VMUT_0362 PF00501 AMP-binding enzyme VMUT_0363 PF03372 Endonuclease/Exonuclease/phosphatase family VMUT_0367 PF03167 Uracil DNA glycosylase superfamily VMUT_0371 PF01161 Phosphatidylethanolamine-binding protein VMUT_0372 PF03484 tRNA synthetase B5 domain VMUT_0372 PF18262 Phe-tRNA synthetase beta subunit B1 domain VMUT_0372 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VMUT_0378 PF02803 Thiolase, C-terminal domain VMUT_0378 PF00108 Thiolase, N-terminal domain VMUT_0381 PF01409 tRNA synthetases class II core domain (F) VMUT_0382 PF01012 Electron transfer flavoprotein domain VMUT_0383 PF00766 Electron transfer flavoprotein FAD-binding domain VMUT_0383 PF01012 Electron transfer flavoprotein domain VMUT_0384 PF13183 4Fe-4S dicluster domain VMUT_0384 PF02754 Cysteine-rich domain VMUT_0385 PF00069 Protein kinase domain VMUT_0385 PF03793 PASTA domain VMUT_0389 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VMUT_0389 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VMUT_0390 PF00162 Phosphoglycerate kinase VMUT_0394 PF06463 Molybdenum Cofactor Synthesis C VMUT_0394 PF04055 Radical SAM superfamily VMUT_0396 PF02403 Seryl-tRNA synthetase N-terminal domain VMUT_0396 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VMUT_0398 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_0398 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_0404 PF00403 Heavy-metal-associated domain VMUT_0406 PF01047 MarR family VMUT_0409 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0410 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0410 PF14785 Maltose transport system permease protein MalF P2 domain VMUT_0412 PF02903 Alpha amylase, N-terminal ig-like domain VMUT_0412 PF00128 Alpha amylase, catalytic domain VMUT_0414 PF00749 tRNA synthetases class I (E and Q), catalytic domain VMUT_0419 PF01434 Peptidase family M41 VMUT_0419 PF06480 FtsH Extracellular VMUT_0419 PF17862 AAA+ lid domain VMUT_0419 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_0420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VMUT_0420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VMUT_0423 PF00596 Class II Aldolase and Adducin N-terminal domain VMUT_0428 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VMUT_0428 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VMUT_0430 PF04055 Radical SAM superfamily VMUT_0430 PF06463 Molybdenum Cofactor Synthesis C VMUT_0432 PF02540 NAD synthase VMUT_0433 PF02540 NAD synthase VMUT_0433 PF00795 Carbon-nitrogen hydrolase VMUT_0434 PF00180 Isocitrate/isopropylmalate dehydrogenase VMUT_0437 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VMUT_0437 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VMUT_0438 PF00293 NUDIX domain VMUT_0441 PF08240 Alcohol dehydrogenase GroES-like domain VMUT_0441 PF00107 Zinc-binding dehydrogenase VMUT_0443 PF00334 Nucleoside diphosphate kinase VMUT_0444 PF00202 Aminotransferase class-III VMUT_0445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VMUT_0445 PF01488 Shikimate / quinate 5-dehydrogenase VMUT_0445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VMUT_0446 PF01546 Peptidase family M20/M25/M40 VMUT_0453 PF01613 Flavin reductase like domain VMUT_0454 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_0454 PF00005 ABC transporter VMUT_0455 PF00005 ABC transporter VMUT_0455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_0456 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0457 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_0483 PF00690 Cation transporter/ATPase, N-terminus VMUT_0483 PF00689 Cation transporting ATPase, C-terminus VMUT_0487 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VMUT_0487 PF07685 CobB/CobQ-like glutamine amidotransferase domain VMUT_0488 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VMUT_0492 PF14306 PUA-like domain VMUT_0492 PF01747 ATP-sulfurylase VMUT_0493 PF00890 FAD binding domain VMUT_0494 PF13187 4Fe-4S dicluster domain VMUT_0494 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit VMUT_0502 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VMUT_0502 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VMUT_0504 PF04358 DsrC like protein VMUT_0508 PF00248 Aldo/keto reductase family VMUT_0516 PF01189 16S rRNA methyltransferase RsmB/F VMUT_0516 PF01029 NusB family VMUT_0518 PF10509 Galactokinase galactose-binding signature VMUT_0518 PF08544 GHMP kinases C terminal VMUT_0518 PF00288 GHMP kinases N terminal domain VMUT_0519 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VMUT_0519 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VMUT_0520 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0523 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0525 PF13686 DsrE/DsrF/DrsH-like family VMUT_0528 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0529 PF00709 Adenylosuccinate synthetase VMUT_0530 PF00206 Lyase VMUT_0530 PF08328 Adenylosuccinate lyase C-terminal VMUT_0535 PF07690 Major Facilitator Superfamily VMUT_0536 PF00920 Dehydratase family VMUT_0537 PF00180 Isocitrate/isopropylmalate dehydrogenase VMUT_0539 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VMUT_0542 PF02754 Cysteine-rich domain VMUT_0542 PF13183 4Fe-4S dicluster domain VMUT_0543 PF02913 FAD linked oxidases, C-terminal domain VMUT_0543 PF01565 FAD binding domain VMUT_0548 PF00919 Uncharacterized protein family UPF0004 VMUT_0548 PF01938 TRAM domain VMUT_0548 PF04055 Radical SAM superfamily VMUT_0553 PF01321 Creatinase/Prolidase N-terminal domain VMUT_0553 PF00557 Metallopeptidase family M24 VMUT_0557 PF00361 Proton-conducting membrane transporter VMUT_0560 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VMUT_0560 PF12557 Cob(I)alamin adenosyltransferase N terminal VMUT_0567 PF13247 4Fe-4S dicluster domain VMUT_0567 PF12800 4Fe-4S binding domain VMUT_0571 PF00902 Sec-independent protein translocase protein (TatC) VMUT_0574 PF02416 mttA/Hcf106 family VMUT_0576 PF00578 AhpC/TSA family VMUT_0576 PF10417 C-terminal domain of 1-Cys peroxiredoxin VMUT_0585 PF00378 Enoyl-CoA hydratase/isomerase VMUT_0586 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain VMUT_0586 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 VMUT_0590 PF00480 ROK family VMUT_0592 PF00582 Universal stress protein family VMUT_0595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VMUT_0599 PF01813 ATP synthase subunit D VMUT_0600 PF01926 50S ribosome-binding GTPase VMUT_0605 PF00171 Aldehyde dehydrogenase family VMUT_0606 PF00478 IMP dehydrogenase / GMP reductase domain VMUT_0606 PF00571 CBS domain VMUT_0607 PF05683 Fumarase C-terminus VMUT_0608 PF05683 Fumarase C-terminus VMUT_0608 PF05681 Fumarate hydratase (Fumerase) VMUT_0610 PF08240 Alcohol dehydrogenase GroES-like domain VMUT_0610 PF00107 Zinc-binding dehydrogenase VMUT_0612 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VMUT_0613 PF00083 Sugar (and other) transporter VMUT_0615 PF00152 tRNA synthetases class II (D, K and N) VMUT_0615 PF01336 OB-fold nucleic acid binding domain VMUT_0617 PF00005 ABC transporter VMUT_0624 PF10509 Galactokinase galactose-binding signature VMUT_0624 PF08544 GHMP kinases C terminal VMUT_0624 PF00288 GHMP kinases N terminal domain VMUT_0625 PF05491 RuvB C-terminal winged helix domain VMUT_0625 PF05496 Holliday junction DNA helicase RuvB P-loop domain VMUT_0625 PF17864 RuvB AAA lid domain VMUT_0626 PF06745 KaiC VMUT_0627 PF02881 SRP54-type protein, helical bundle domain VMUT_0627 PF02978 Signal peptide binding domain VMUT_0627 PF00448 SRP54-type protein, GTPase domain VMUT_0629 PF00595 PDZ domain VMUT_0632 PF01012 Electron transfer flavoprotein domain VMUT_0633 PF01012 Electron transfer flavoprotein domain VMUT_0633 PF00766 Electron transfer flavoprotein FAD-binding domain VMUT_0634 PF02754 Cysteine-rich domain VMUT_0634 PF13183 4Fe-4S dicluster domain VMUT_0634 PF02665 Nitrate reductase gamma subunit VMUT_0635 PF01593 Flavin containing amine oxidoreductase VMUT_0637 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_0638 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_0638 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_0638 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VMUT_0643 PF01751 Toprim domain VMUT_0643 PF01131 DNA topoisomerase VMUT_0643 PF00270 DEAD/DEAH box helicase VMUT_0643 PF17915 Reverse gyrase zinc finger VMUT_0644 PF00317 Ribonucleotide reductase, all-alpha domain VMUT_0644 PF00317 Ribonucleotide reductase, all-alpha domain VMUT_0644 PF02867 Ribonucleotide reductase, barrel domain VMUT_0644 PF02867 Ribonucleotide reductase, barrel domain VMUT_0644 PF03477 ATP cone domain VMUT_0644 PF03477 ATP cone domain VMUT_0646 PF02803 Thiolase, C-terminal domain VMUT_0646 PF00108 Thiolase, N-terminal domain VMUT_0647 PF01475 Ferric uptake regulator family VMUT_0648 PF02915 Rubrerythrin VMUT_0650 PF02934 GatB/GatE catalytic domain VMUT_0650 PF02637 GatB domain VMUT_0652 PF01139 tRNA-splicing ligase RtcB VMUT_0653 PF00177 Ribosomal protein S7p/S5e VMUT_0655 PF17862 AAA+ lid domain VMUT_0655 PF01434 Peptidase family M41 VMUT_0655 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_0657 PF03458 UPF0126 domain VMUT_0658 PF00174 Oxidoreductase molybdopterin binding domain VMUT_0662 PF01142 tRNA pseudouridine synthase D (TruD) VMUT_0666 PF01872 RibD C-terminal domain VMUT_0679 PF13193 AMP-binding enzyme C-terminal domain VMUT_0679 PF00501 AMP-binding enzyme VMUT_0680 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_0680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_0680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_0681 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal VMUT_0681 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal VMUT_0682 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_0683 PF11987 Translation-initiation factor 2 VMUT_0683 PF00009 Elongation factor Tu GTP binding domain VMUT_0683 PF04760 Translation initiation factor IF-2, N-terminal region VMUT_0688 PF00293 NUDIX domain VMUT_0689 PF00633 Helix-hairpin-helix motif VMUT_0689 PF00730 HhH-GPD superfamily base excision DNA repair protein VMUT_0689 PF10576 Iron-sulfur binding domain of endonuclease III VMUT_0690 PF00227 Proteasome subunit VMUT_0691 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VMUT_0694 PF00392 Bacterial regulatory proteins, gntR family VMUT_0694 PF00155 Aminotransferase class I and II VMUT_0696 PF00117 Glutamine amidotransferase class-I VMUT_0696 PF06418 CTP synthase N-terminus VMUT_0707 PF01026 TatD related DNase VMUT_0713 PF08443 RimK-like ATP-grasp domain VMUT_0713 PF18030 RimK PreATP-grasp domain VMUT_0714 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VMUT_0715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VMUT_0715 PF13378 Enolase C-terminal domain-like VMUT_0718 PF13439 Glycosyltransferase Family 4 VMUT_0718 PF00534 Glycosyl transferases group 1 VMUT_0724 PF00085 Thioredoxin VMUT_0726 PF00583 Acetyltransferase (GNAT) family VMUT_0726 PF13380 CoA binding domain VMUT_0726 PF13607 Succinyl-CoA ligase like flavodoxin domain VMUT_0727 PF13380 CoA binding domain VMUT_0727 PF13607 Succinyl-CoA ligase like flavodoxin domain VMUT_0727 PF00583 Acetyltransferase (GNAT) family VMUT_0728 PF01435 Peptidase family M48 VMUT_0735 PF00270 DEAD/DEAH box helicase VMUT_0735 PF17191 RecG wedge domain VMUT_0735 PF00271 Helicase conserved C-terminal domain VMUT_0737 PF01380 SIS domain VMUT_0737 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain VMUT_0738 PF01063 Amino-transferase class IV VMUT_0739 PF00717 Peptidase S24-like VMUT_0739 PF01726 LexA DNA binding domain VMUT_0743 PF01914 MarC family integral membrane protein VMUT_0747 PF08543 Phosphomethylpyrimidine kinase VMUT_0755 PF00410 Ribosomal protein S8 VMUT_0756 PF07676 WD40-like Beta Propeller Repeat VMUT_0756 PF00326 Prolyl oligopeptidase family VMUT_0760 PF00203 Ribosomal protein S19 VMUT_0761 PF00501 AMP-binding enzyme VMUT_0761 PF13193 AMP-binding enzyme C-terminal domain VMUT_0772 PF01370 NAD dependent epimerase/dehydratase family VMUT_0773 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VMUT_0773 PF00953 Glycosyl transferase family 4 VMUT_0775 PF01979 Amidohydrolase family VMUT_0776 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VMUT_0776 PF00749 tRNA synthetases class I (E and Q), catalytic domain VMUT_0777 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_0779 PF00221 Aromatic amino acid lyase VMUT_0781 PF00809 Pterin binding enzyme VMUT_0784 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VMUT_0784 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VMUT_0788 PF03601 Conserved hypothetical protein 698 VMUT_0791 PF17391 Urocanase N-terminal domain VMUT_0791 PF17392 Urocanase C-terminal domain VMUT_0791 PF01175 Urocanase Rossmann-like domain VMUT_0797 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_0797 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_0797 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_0802 PF01396 Topoisomerase DNA binding C4 zinc finger VMUT_0802 PF08272 Topoisomerase I zinc-ribbon-like VMUT_0802 PF01131 DNA topoisomerase VMUT_0802 PF01751 Toprim domain VMUT_0803 PF03070 TENA/THI-4/PQQC family VMUT_0805 PF04055 Radical SAM superfamily VMUT_0805 PF06463 Molybdenum Cofactor Synthesis C VMUT_0808 PF12706 Beta-lactamase superfamily domain VMUT_0809 PF00398 Ribosomal RNA adenine dimethylase VMUT_0810 PF00696 Amino acid kinase family VMUT_0813 PF01113 Dihydrodipicolinate reductase, N-terminus VMUT_0815 PF01568 Molydopterin dinucleotide binding domain VMUT_0815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VMUT_0815 PF12838 4Fe-4S dicluster domain VMUT_0815 PF00384 Molybdopterin oxidoreductase VMUT_0815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VMUT_0816 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VMUT_0816 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VMUT_0816 PF10531 SLBB domain VMUT_0819 PF15714 Stage V sporulation protein T C-terminal, transcription factor VMUT_0819 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin VMUT_0820 PF00710 Asparaginase, N-terminal VMUT_0820 PF17763 Glutaminase/Asparaginase C-terminal domain VMUT_0821 PF17746 SfsA N-terminal OB domain VMUT_0821 PF03749 Sugar fermentation stimulation protein RE domain VMUT_0825 PF02080 TrkA-C domain VMUT_0825 PF03600 Citrate transporter VMUT_0829 PF00202 Aminotransferase class-III VMUT_0830 PF00857 Isochorismatase family VMUT_0832 PF00814 Glycoprotease family VMUT_0842 PF01040 UbiA prenyltransferase family VMUT_0850 PF02515 CoA-transferase family III VMUT_0856 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VMUT_0856 PF13378 Enolase C-terminal domain-like VMUT_0857 PF01791 DeoC/LacD family aldolase VMUT_0858 PF00411 Ribosomal protein S11 VMUT_0864 PF00885 6,7-dimethyl-8-ribityllumazine synthase VMUT_0865 PF01931 Protein of unknown function DUF84 VMUT_0870 PF00701 Dihydrodipicolinate synthetase family VMUT_0872 PF00571 CBS domain VMUT_0872 PF00478 IMP dehydrogenase / GMP reductase domain VMUT_0876 PF12833 Helix-turn-helix domain VMUT_0876 PF02805 Metal binding domain of Ada VMUT_0876 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VMUT_0876 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VMUT_0883 PF06480 FtsH Extracellular VMUT_0883 PF01434 Peptidase family M41 VMUT_0883 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_0883 PF17862 AAA+ lid domain VMUT_0891 PF03328 HpcH/HpaI aldolase/citrate lyase family VMUT_0893 PF00535 Glycosyl transferase family 2 VMUT_0894 PF10672 S-adenosylmethionine-dependent methyltransferase VMUT_0894 PF02926 THUMP domain VMUT_0894 PF01170 Putative RNA methylase family UPF0020 VMUT_0896 PF00252 Ribosomal protein L16p/L10e VMUT_0903 PF02272 DHHA1 domain VMUT_0903 PF01411 tRNA synthetases class II (A) VMUT_0903 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VMUT_0904 PF00753 Metallo-beta-lactamase superfamily VMUT_0906 PF00687 Ribosomal protein L1p/L10e family VMUT_0910 PF02881 SRP54-type protein, helical bundle domain VMUT_0910 PF00448 SRP54-type protein, GTPase domain VMUT_0914 PF01926 50S ribosome-binding GTPase VMUT_0914 PF13167 GTP-binding GTPase N-terminal VMUT_0914 PF16360 GTP-binding GTPase Middle Region VMUT_0916 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0916 PF14759 Reductase C-terminal VMUT_0920 PF01032 FecCD transport family VMUT_0921 PF00005 ABC transporter VMUT_0922 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain VMUT_0922 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 VMUT_0924 PF02310 B12 binding domain VMUT_0924 PF01642 Methylmalonyl-CoA mutase VMUT_0931 PF02874 ATP synthase alpha/beta family, beta-barrel domain VMUT_0931 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VMUT_0933 PF02441 Flavoprotein VMUT_0934 PF01171 PP-loop family VMUT_0935 PF00133 tRNA synthetases class I (I, L, M and V) VMUT_0935 PF08264 Anticodon-binding domain of tRNA VMUT_0938 PF06480 FtsH Extracellular VMUT_0938 PF01434 Peptidase family M41 VMUT_0938 PF17862 AAA+ lid domain VMUT_0938 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_0941 PF00146 NADH dehydrogenase VMUT_0945 PF13520 Amino acid permease VMUT_0946 PF13520 Amino acid permease VMUT_0947 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VMUT_0947 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_0948 PF07728 AAA domain (dynein-related subfamily) VMUT_0948 PF12592 Protein of unknown function (DUF3763) VMUT_0948 PF17868 AAA lid domain VMUT_0951 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VMUT_0951 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VMUT_0957 PF08946 Osmosensory transporter coiled coil VMUT_0957 PF00083 Sugar (and other) transporter VMUT_0960 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) VMUT_0963 PF00380 Ribosomal protein S9/S16 VMUT_0964 PF00572 Ribosomal protein L13 VMUT_0965 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VMUT_0967 PF00474 Sodium:solute symporter family VMUT_0975 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VMUT_0975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VMUT_0976 PF00132 Bacterial transferase hexapeptide (six repeats) VMUT_0978 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VMUT_0978 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VMUT_0978 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VMUT_0978 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VMUT_0979 PF05343 M42 glutamyl aminopeptidase VMUT_0980 PF00860 Permease family VMUT_0981 PF01433 Peptidase family M1 domain VMUT_0981 PF11838 ERAP1-like C-terminal domain VMUT_1033 PF02361 Cobalt transport protein VMUT_1033 PF00005 ABC transporter VMUT_1035 PF07726 ATPase family associated with various cellular activities (AAA) VMUT_1035 PF17863 AAA lid domain VMUT_1041 PF00535 Glycosyl transferase family 2 VMUT_1043 PF13439 Glycosyltransferase Family 4 VMUT_1043 PF00534 Glycosyl transferases group 1 VMUT_1051 PF00535 Glycosyl transferase family 2 VMUT_1054 PF00535 Glycosyl transferase family 2 VMUT_1067 PF02709 N-terminal domain of galactosyltransferase VMUT_1067 PF00535 Glycosyl transferase family 2 VMUT_1069 PF01507 Phosphoadenosine phosphosulfate reductase family VMUT_1070 PF16347 Domain of unknown function (DUF4976) VMUT_1070 PF00884 Sulfatase VMUT_1076 PF00535 Glycosyl transferase family 2 VMUT_1079 PF00535 Glycosyl transferase family 2 VMUT_1080 PF00535 Glycosyl transferase family 2 VMUT_1086 PF05050 Methyltransferase FkbM domain VMUT_1089 PF00534 Glycosyl transferases group 1 VMUT_1090 PF13439 Glycosyltransferase Family 4 VMUT_1090 PF00534 Glycosyl transferases group 1 VMUT_1092 PF16363 GDP-mannose 4,6 dehydratase VMUT_1093 PF13439 Glycosyltransferase Family 4 VMUT_1093 PF00534 Glycosyl transferases group 1 VMUT_1094 PF00535 Glycosyl transferase family 2 VMUT_1095 PF08323 Starch synthase catalytic domain VMUT_1095 PF00534 Glycosyl transferases group 1 VMUT_1110 PF07726 ATPase family associated with various cellular activities (AAA) VMUT_1110 PF17863 AAA lid domain VMUT_1112 PF00535 Glycosyl transferase family 2 VMUT_1114 PF00005 ABC transporter VMUT_1114 PF08402 TOBE domain VMUT_1122 PF13439 Glycosyltransferase Family 4 VMUT_1122 PF00534 Glycosyl transferases group 1 VMUT_1124 PF03450 CO dehydrogenase flavoprotein C-terminal domain VMUT_1124 PF00941 FAD binding domain in molybdopterin dehydrogenase VMUT_1125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VMUT_1125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VMUT_1131 PF04055 Radical SAM superfamily VMUT_1131 PF02310 B12 binding domain VMUT_1132 PF06463 Molybdenum Cofactor Synthesis C VMUT_1132 PF04055 Radical SAM superfamily VMUT_1133 PF01494 FAD binding domain VMUT_1135 PF01012 Electron transfer flavoprotein domain VMUT_1136 PF01012 Electron transfer flavoprotein domain VMUT_1136 PF00766 Electron transfer flavoprotein FAD-binding domain VMUT_1137 PF04127 DNA / pantothenate metabolism flavoprotein VMUT_1137 PF02441 Flavoprotein VMUT_1150 PF13378 Enolase C-terminal domain-like VMUT_1150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VMUT_1151 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VMUT_1153 PF00392 Bacterial regulatory proteins, gntR family VMUT_1153 PF07729 FCD domain VMUT_1154 PF00083 Sugar (and other) transporter VMUT_1156 PF07969 Amidohydrolase family VMUT_1157 PF01546 Peptidase family M20/M25/M40 VMUT_1157 PF07687 Peptidase dimerisation domain VMUT_1158 PF07690 Major Facilitator Superfamily VMUT_1160 PF03069 Acetamidase/Formamidase family VMUT_1161 PF02817 e3 binding domain VMUT_1161 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VMUT_1161 PF00364 Biotin-requiring enzyme VMUT_1165 PF01144 Coenzyme A transferase VMUT_1167 PF00171 Aldehyde dehydrogenase family VMUT_1168 PF00202 Aminotransferase class-III VMUT_1169 PF17284 Spermidine synthase tetramerisation domain VMUT_1170 PF00202 Aminotransferase class-III VMUT_1171 PF00491 Arginase family VMUT_1177 PF00202 Aminotransferase class-III VMUT_1178 PF00171 Aldehyde dehydrogenase family VMUT_1179 PF01209 ubiE/COQ5 methyltransferase family VMUT_1198 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_1198 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_1199 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_1201 PF01565 FAD binding domain VMUT_1201 PF02913 FAD linked oxidases, C-terminal domain VMUT_1202 PF01565 FAD binding domain VMUT_1202 PF02913 FAD linked oxidases, C-terminal domain VMUT_1204 PF02652 L-lactate permease VMUT_1205 PF08544 GHMP kinases C terminal VMUT_1205 PF00288 GHMP kinases N terminal domain VMUT_1207 PF00271 Helicase conserved C-terminal domain VMUT_1207 PF08148 DSHCT (NUC185) domain VMUT_1207 PF00270 DEAD/DEAH box helicase VMUT_1208 PF00483 Nucleotidyl transferase VMUT_1209 PF13439 Glycosyltransferase Family 4 VMUT_1209 PF00534 Glycosyl transferases group 1 VMUT_1210 PF07687 Peptidase dimerisation domain VMUT_1210 PF01546 Peptidase family M20/M25/M40 VMUT_1213 PF01513 ATP-NAD kinase VMUT_1220 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VMUT_1224 PF02577 Bifunctional nuclease VMUT_1225 PF13393 Histidyl-tRNA synthetase VMUT_1228 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VMUT_1228 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VMUT_1230 PF05378 Hydantoinase/oxoprolinase N-terminal region VMUT_1230 PF01968 Hydantoinase/oxoprolinase VMUT_1232 PF02110 Hydroxyethylthiazole kinase family VMUT_1233 PF00107 Zinc-binding dehydrogenase VMUT_1233 PF08240 Alcohol dehydrogenase GroES-like domain VMUT_1234 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VMUT_1234 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VMUT_1234 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VMUT_1235 PF08240 Alcohol dehydrogenase GroES-like domain VMUT_1235 PF00107 Zinc-binding dehydrogenase VMUT_1238 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VMUT_1238 PF13378 Enolase C-terminal domain-like VMUT_1240 PF00171 Aldehyde dehydrogenase family VMUT_1241 PF03786 D-mannonate dehydratase (UxuA) VMUT_1242 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain VMUT_1242 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 VMUT_1243 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VMUT_1243 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VMUT_1245 PF00083 Sugar (and other) transporter VMUT_1247 PF01370 NAD dependent epimerase/dehydratase family VMUT_1248 PF02653 Branched-chain amino acid transport system / permease component VMUT_1249 PF00005 ABC transporter VMUT_1251 PF01547 Bacterial extracellular solute-binding protein VMUT_1252 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VMUT_1252 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VMUT_1253 PF02464 Competence-damaged protein VMUT_1253 PF18146 Damage-inducible protein CinA KH domain VMUT_1253 PF00994 Probable molybdopterin binding domain VMUT_1254 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VMUT_1254 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VMUT_1255 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VMUT_1255 PF08666 SAF domain VMUT_1258 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_1259 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_1260 PF00005 ABC transporter VMUT_1260 PF17912 MalK OB fold domain VMUT_1262 PF02633 Creatinine amidohydrolase VMUT_1263 PF01791 DeoC/LacD family aldolase VMUT_1264 PF00365 Phosphofructokinase VMUT_1266 PF01406 tRNA synthetases class I (C) catalytic domain VMUT_1266 PF09190 DALR domain VMUT_1268 PF02874 ATP synthase alpha/beta family, beta-barrel domain VMUT_1268 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VMUT_1268 PF16886 ATPsynthase alpha/beta subunit N-term extension VMUT_1271 PF00831 Ribosomal L29 protein VMUT_1272 PF00189 Ribosomal protein S3, C-terminal domain VMUT_1272 PF07650 KH domain VMUT_1279 PF01040 UbiA prenyltransferase family VMUT_1280 PF13187 4Fe-4S dicluster domain VMUT_1280 PF01645 Conserved region in glutamate synthase VMUT_1281 PF00501 AMP-binding enzyme VMUT_1281 PF13193 AMP-binding enzyme C-terminal domain VMUT_1281 PF16177 Acetyl-coenzyme A synthetase N-terminus VMUT_1282 PF13193 AMP-binding enzyme C-terminal domain VMUT_1282 PF00501 AMP-binding enzyme VMUT_1283 PF03453 MoeA N-terminal region (domain I and II) VMUT_1283 PF03454 MoeA C-terminal region (domain IV) VMUT_1283 PF00994 Probable molybdopterin binding domain VMUT_1291 PF00005 ABC transporter VMUT_1293 PF01161 Phosphatidylethanolamine-binding protein VMUT_1294 PF00920 Dehydratase family VMUT_1296 PF01227 GTP cyclohydrolase I VMUT_1299 PF03176 MMPL family VMUT_1301 PF01544 CorA-like Mg2+ transporter protein VMUT_1303 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VMUT_1303 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VMUT_1305 PF00083 Sugar (and other) transporter VMUT_1309 PF17862 AAA+ lid domain VMUT_1309 PF01434 Peptidase family M41 VMUT_1309 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_1310 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VMUT_1310 PF10996 Beta-Casp domain VMUT_1310 PF00753 Metallo-beta-lactamase superfamily VMUT_1311 PF04055 Radical SAM superfamily VMUT_1311 PF13186 Iron-sulfur cluster-binding domain VMUT_1312 PF13186 Iron-sulfur cluster-binding domain VMUT_1312 PF04055 Radical SAM superfamily VMUT_1315 PF00557 Metallopeptidase family M24 VMUT_1315 PF01321 Creatinase/Prolidase N-terminal domain VMUT_1317 PF03030 Inorganic H+ pyrophosphatase VMUT_1318 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VMUT_1318 PF02896 PEP-utilising enzyme, TIM barrel domain VMUT_1318 PF00391 PEP-utilising enzyme, mobile domain VMUT_1319 PF01925 Sulfite exporter TauE/SafE VMUT_1325 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase VMUT_1328 PF13085 2Fe-2S iron-sulfur cluster binding domain VMUT_1328 PF13183 4Fe-4S dicluster domain VMUT_1331 PF00266 Aminotransferase class-V VMUT_1334 PF07685 CobB/CobQ-like glutamine amidotransferase domain VMUT_1334 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VMUT_1334 PF00155 Aminotransferase class I and II VMUT_1335 PF07687 Peptidase dimerisation domain VMUT_1335 PF01546 Peptidase family M20/M25/M40 VMUT_1336 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VMUT_1336 PF01411 tRNA synthetases class II (A) VMUT_1336 PF02272 DHHA1 domain VMUT_1339 PF00005 ABC transporter VMUT_1347 PF00083 Sugar (and other) transporter VMUT_1348 PF00281 Ribosomal protein L5 VMUT_1348 PF00673 ribosomal L5P family C-terminus VMUT_1350 PF17676 LD-carboxypeptidase C-terminal domain VMUT_1350 PF02016 LD-carboxypeptidase N-terminal domain VMUT_1351 PF01380 SIS domain VMUT_1352 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VMUT_1352 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VMUT_1354 PF02515 CoA-transferase family III VMUT_1357 PF04055 Radical SAM superfamily VMUT_1358 PF04055 Radical SAM superfamily VMUT_1360 PF01565 FAD binding domain VMUT_1360 PF02913 FAD linked oxidases, C-terminal domain VMUT_1361 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VMUT_1361 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VMUT_1363 PF01266 FAD dependent oxidoreductase VMUT_1364 PF04185 Phosphoesterase family VMUT_1369 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_1369 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_1369 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_1371 PF00107 Zinc-binding dehydrogenase VMUT_1371 PF08240 Alcohol dehydrogenase GroES-like domain VMUT_1372 PF00205 Thiamine pyrophosphate enzyme, central domain VMUT_1372 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VMUT_1372 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_1373 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VMUT_1373 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VMUT_1375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VMUT_1375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VMUT_1376 PF02803 Thiolase, C-terminal domain VMUT_1376 PF00108 Thiolase, N-terminal domain VMUT_1378 PF00378 Enoyl-CoA hydratase/isomerase VMUT_1381 PF13193 AMP-binding enzyme C-terminal domain VMUT_1381 PF00501 AMP-binding enzyme VMUT_1387 PF00459 Inositol monophosphatase family VMUT_1400 PF01867 CRISPR associated protein Cas1 VMUT_1405 PF03266 NTPase VMUT_1409 PF01209 ubiE/COQ5 methyltransferase family VMUT_1410 PF01458 Uncharacterized protein family (UPF0051) VMUT_1411 PF01458 Uncharacterized protein family (UPF0051) VMUT_1412 PF01458 Uncharacterized protein family (UPF0051) VMUT_1413 PF00005 ABC transporter VMUT_1414 PF01979 Amidohydrolase family VMUT_1417 PF02885 Glycosyl transferase family, helical bundle domain VMUT_1417 PF00117 Glutamine amidotransferase class-I VMUT_1417 PF00591 Glycosyl transferase family, a/b domain VMUT_1418 PF00425 chorismate binding enzyme VMUT_1418 PF04715 Anthranilate synthase component I, N terminal region VMUT_1419 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VMUT_1420 PF02885 Glycosyl transferase family, helical bundle domain VMUT_1420 PF00591 Glycosyl transferase family, a/b domain VMUT_1421 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_1422 PF00290 Tryptophan synthase alpha chain VMUT_1423 PF00218 Indole-3-glycerol phosphate synthase VMUT_1425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VMUT_1426 PF02779 Transketolase, pyrimidine binding domain VMUT_1426 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VMUT_1426 PF02780 Transketolase, C-terminal domain VMUT_1427 PF00288 GHMP kinases N terminal domain VMUT_1427 PF08544 GHMP kinases C terminal VMUT_1428 PF01487 Type I 3-dehydroquinase VMUT_1429 PF08501 Shikimate dehydrogenase substrate binding domain VMUT_1429 PF01488 Shikimate / quinate 5-dehydrogenase VMUT_1429 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VMUT_1431 PF18152 DAHP synthase ferredoxin-like domain VMUT_1431 PF00793 DAHP synthetase I family VMUT_1432 PF01817 Chorismate mutase type II VMUT_1432 PF00800 Prephenate dehydratase VMUT_1432 PF01842 ACT domain VMUT_1434 PF01264 Chorismate synthase VMUT_1437 PF00958 GMP synthase C terminal domain VMUT_1437 PF02540 NAD synthase VMUT_1437 PF00117 Glutamine amidotransferase class-I VMUT_1438 PF00958 GMP synthase C terminal domain VMUT_1438 PF00117 Glutamine amidotransferase class-I VMUT_1438 PF02540 NAD synthase VMUT_1450 PF01380 SIS domain VMUT_1450 PF00571 CBS domain VMUT_1451 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_1453 PF00149 Calcineurin-like phosphoesterase VMUT_1456 PF13607 Succinyl-CoA ligase like flavodoxin domain VMUT_1456 PF13380 CoA binding domain VMUT_1456 PF00583 Acetyltransferase (GNAT) family VMUT_1457 PF00999 Sodium/hydrogen exchanger family VMUT_1459 PF00654 Voltage gated chloride channel VMUT_1463 PF00005 ABC transporter VMUT_1465 PF00575 S1 RNA binding domain VMUT_1465 PF03725 3' exoribonuclease family, domain 2 VMUT_1465 PF01138 3' exoribonuclease family, domain 1 VMUT_1465 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VMUT_1465 PF00013 KH domain VMUT_1467 PF01253 Translation initiation factor SUI1 VMUT_1469 PF01048 Phosphorylase superfamily VMUT_1470 PF01380 SIS domain VMUT_1490 PF03787 RAMP superfamily VMUT_1498 PF00271 Helicase conserved C-terminal domain VMUT_1498 PF08494 DEAD/H associated VMUT_1498 PF00270 DEAD/DEAH box helicase VMUT_1503 PF00437 Type II/IV secretion system protein VMUT_1504 PF13614 AAA domain VMUT_1507 PF01329 Pterin 4 alpha carbinolamine dehydratase VMUT_1512 PF00083 Sugar (and other) transporter VMUT_1512 PF07690 Major Facilitator Superfamily VMUT_1517 PF00800 Prephenate dehydratase VMUT_1517 PF01842 ACT domain VMUT_1518 PF00180 Isocitrate/isopropylmalate dehydrogenase VMUT_1520 PF00682 HMGL-like VMUT_1520 PF08502 LeuA allosteric (dimerisation) domain VMUT_1521 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_1521 PF00205 Thiamine pyrophosphate enzyme, central domain VMUT_1521 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VMUT_1523 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VMUT_1523 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VMUT_1524 PF00330 Aconitase family (aconitate hydratase) VMUT_1526 PF00694 Aconitase C-terminal domain VMUT_1527 PF08502 LeuA allosteric (dimerisation) domain VMUT_1527 PF00682 HMGL-like VMUT_1528 PF00696 Amino acid kinase family VMUT_1528 PF01842 ACT domain VMUT_1529 PF01118 Semialdehyde dehydrogenase, NAD binding domain VMUT_1529 PF02774 Semialdehyde dehydrogenase, dimerisation domain VMUT_1530 PF03447 Homoserine dehydrogenase, NAD binding domain VMUT_1530 PF00742 Homoserine dehydrogenase VMUT_1531 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_1532 PF00083 Sugar (and other) transporter VMUT_1533 PF02774 Semialdehyde dehydrogenase, dimerisation domain VMUT_1533 PF01118 Semialdehyde dehydrogenase, NAD binding domain VMUT_1535 PF18030 RimK PreATP-grasp domain VMUT_1535 PF08443 RimK-like ATP-grasp domain VMUT_1536 PF00682 HMGL-like VMUT_1538 PF08443 RimK-like ATP-grasp domain VMUT_1540 PF00696 Amino acid kinase family VMUT_1542 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VMUT_1542 PF00117 Glutamine amidotransferase class-I VMUT_1543 PF02142 MGS-like domain VMUT_1543 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VMUT_1543 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VMUT_1544 PF00206 Lyase VMUT_1544 PF14698 Argininosuccinate lyase C-terminal VMUT_1547 PF00764 Arginosuccinate synthase VMUT_1548 PF05193 Peptidase M16 inactive domain VMUT_1550 PF00338 Ribosomal protein S10p/S20e VMUT_1551 PF00009 Elongation factor Tu GTP binding domain VMUT_1551 PF03143 Elongation factor Tu C-terminal domain VMUT_1551 PF03144 Elongation factor Tu domain 2 VMUT_1554 PF07690 Major Facilitator Superfamily VMUT_1556 PF00994 Probable molybdopterin binding domain VMUT_1558 PF00111 2Fe-2S iron-sulfur cluster binding domain VMUT_1558 PF01799 [2Fe-2S] binding domain VMUT_1559 PF03450 CO dehydrogenase flavoprotein C-terminal domain VMUT_1559 PF00941 FAD binding domain in molybdopterin dehydrogenase VMUT_1560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VMUT_1560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VMUT_1565 PF02887 Pyruvate kinase, alpha/beta domain VMUT_1565 PF00224 Pyruvate kinase, barrel domain VMUT_1565 PF00391 PEP-utilising enzyme, mobile domain VMUT_1568 PF09106 Elongation factor SelB, winged helix VMUT_1568 PF09107 Elongation factor SelB, winged helix VMUT_1568 PF09105 Elongation factor SelB, winged helix VMUT_1568 PF03144 Elongation factor Tu domain 2 VMUT_1568 PF00009 Elongation factor Tu GTP binding domain VMUT_1570 PF00120 Glutamine synthetase, catalytic domain VMUT_1570 PF03951 Glutamine synthetase, beta-Grasp domain VMUT_1572 PF00085 Thioredoxin VMUT_1579 PF01875 Memo-like protein VMUT_1580 PF00318 Ribosomal protein S2 VMUT_1581 PF03952 Enolase, N-terminal domain VMUT_1581 PF00113 Enolase, C-terminal TIM barrel domain VMUT_1584 PF01256 Carbohydrate kinase VMUT_1584 PF03853 YjeF-related protein N-terminus VMUT_1588 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain VMUT_1588 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain VMUT_1589 PF00270 DEAD/DEAH box helicase VMUT_1589 PF00271 Helicase conserved C-terminal domain VMUT_1596 PF00899 ThiF family VMUT_1599 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VMUT_1599 PF14824 Sirohaem biosynthesis protein central VMUT_1599 PF10414 Sirohaem synthase dimerisation region VMUT_1601 PF00378 Enoyl-CoA hydratase/isomerase VMUT_1603 PF00696 Amino acid kinase family VMUT_1607 PF02834 LigT like Phosphoesterase VMUT_1611 PF07690 Major Facilitator Superfamily VMUT_1616 PF01884 PcrB family VMUT_1620 PF01230 HIT domain VMUT_1623 PF00994 Probable molybdopterin binding domain VMUT_1623 PF02464 Competence-damaged protein VMUT_1641 PF16653 Saccharopine dehydrogenase C-terminal domain VMUT_1641 PF03435 Saccharopine dehydrogenase NADP binding domain VMUT_1642 PF00005 ABC transporter VMUT_1643 PF08704 tRNA methyltransferase complex GCD14 subunit VMUT_1646 PF01209 ubiE/COQ5 methyltransferase family VMUT_1650 PF04055 Radical SAM superfamily VMUT_1650 PF01938 TRAM domain VMUT_1650 PF00919 Uncharacterized protein family UPF0004 VMUT_1653 PF01145 SPFH domain / Band 7 family VMUT_1656 PF13419 Haloacid dehalogenase-like hydrolase VMUT_1659 PF01871 AMMECR1 VMUT_1664 PF00011 Hsp20/alpha crystallin family VMUT_1674 PF12706 Beta-lactamase superfamily domain VMUT_1675 PF01494 FAD binding domain VMUT_1677 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VMUT_1679 PF03725 3' exoribonuclease family, domain 2 VMUT_1679 PF01138 3' exoribonuclease family, domain 1 VMUT_1680 PF03725 3' exoribonuclease family, domain 2 VMUT_1680 PF01138 3' exoribonuclease family, domain 1 VMUT_1680 PF00575 S1 RNA binding domain VMUT_1680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VMUT_1680 PF00013 KH domain VMUT_1681 PF00583 Acetyltransferase (GNAT) family VMUT_1686 PF01230 HIT domain VMUT_1688 PF00850 Histone deacetylase domain VMUT_1690 PF01467 Cytidylyltransferase-like VMUT_1691 PF03061 Thioesterase superfamily VMUT_1694 PF00005 ABC transporter VMUT_1694 PF13732 Domain of unknown function (DUF4162) VMUT_1695 PF00163 Ribosomal protein S4/S9 N-terminal domain VMUT_1695 PF01479 S4 domain VMUT_1723 PF02348 Cytidylyltransferase VMUT_1724 PF12804 MobA-like NTP transferase domain VMUT_1726 PF00850 Histone deacetylase domain VMUT_1734 PF00571 CBS domain VMUT_1734 PF00478 IMP dehydrogenase / GMP reductase domain VMUT_1737 PF01018 GTP1/OBG VMUT_1737 PF01926 50S ribosome-binding GTPase VMUT_1739 PF07282 Putative transposase DNA-binding domain VMUT_1739 PF12323 Helix-turn-helix domain VMUT_1739 PF01385 Probable transposase VMUT_1751 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VMUT_1751 PF14572 Phosphoribosyl synthetase-associated domain VMUT_1757 PF00437 Type II/IV secretion system protein VMUT_1760 PF00333 Ribosomal protein S5, N-terminal domain VMUT_1760 PF03719 Ribosomal protein S5, C-terminal domain VMUT_1762 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VMUT_1766 PF00297 Ribosomal protein L3 VMUT_1768 PF00276 Ribosomal protein L23 VMUT_1771 PF01725 Ham1 family VMUT_1774 PF08494 DEAD/H associated VMUT_1774 PF00271 Helicase conserved C-terminal domain VMUT_1774 PF00270 DEAD/DEAH box helicase VMUT_1778 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_1779 PF00005 ABC transporter VMUT_1779 PF08402 TOBE domain VMUT_1780 PF00390 Malic enzyme, N-terminal domain VMUT_1780 PF03949 Malic enzyme, NAD binding domain VMUT_1782 PF01037 Lrp/AsnC ligand binding domain VMUT_1782 PF13404 AsnC-type helix-turn-helix domain VMUT_1783 PF03104 DNA polymerase family B, exonuclease domain VMUT_1783 PF00136 DNA polymerase family B VMUT_1786 PF01255 Putative undecaprenyl diphosphate synthase VMUT_1787 PF02911 Formyl transferase, C-terminal domain VMUT_1787 PF01370 NAD dependent epimerase/dehydratase family VMUT_1787 PF00551 Formyl transferase VMUT_1788 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VMUT_1788 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VMUT_1788 PF02824 TGS domain VMUT_1788 PF03129 Anticodon binding domain VMUT_1791 PF01040 UbiA prenyltransferase family VMUT_1804 PF00437 Type II/IV secretion system protein VMUT_1812 PF13718 GNAT acetyltransferase 2 VMUT_1812 PF17176 tRNA-binding domain VMUT_1812 PF05127 Helicase VMUT_1812 PF08351 Domain of unknown function (DUF1726) VMUT_1814 PF00361 Proton-conducting membrane transporter VMUT_1815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VMUT_1815 PF00361 Proton-conducting membrane transporter VMUT_1816 PF02589 LUD domain VMUT_1816 PF13183 4Fe-4S dicluster domain VMUT_1816 PF11870 Domain of unknown function (DUF3390) VMUT_1817 PF00586 AIR synthase related protein, N-terminal domain VMUT_1817 PF02769 AIR synthase related protein, C-terminal domain VMUT_1818 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_1818 PF13291 ACT domain VMUT_1819 PF01042 Endoribonuclease L-PSP VMUT_1822 PF03453 MoeA N-terminal region (domain I and II) VMUT_1822 PF03454 MoeA C-terminal region (domain IV) VMUT_1822 PF00994 Probable molybdopterin binding domain VMUT_1829 PF01914 MarC family integral membrane protein VMUT_1830 PF08267 Cobalamin-independent synthase, N-terminal domain VMUT_1830 PF01717 Cobalamin-independent synthase, Catalytic domain VMUT_1831 PF01336 OB-fold nucleic acid binding domain VMUT_1831 PF00152 tRNA synthetases class II (D, K and N) VMUT_1832 PF07685 CobB/CobQ-like glutamine amidotransferase domain VMUT_1836 PF13520 Amino acid permease VMUT_1837 PF00294 pfkB family carbohydrate kinase VMUT_1838 PF13193 AMP-binding enzyme C-terminal domain VMUT_1838 PF00501 AMP-binding enzyme VMUT_1839 PF02254 TrkA-N domain VMUT_1839 PF07885 Ion channel VMUT_1840 PF01370 NAD dependent epimerase/dehydratase family VMUT_1844 PF03186 CobD/Cbib protein VMUT_1846 PF01467 Cytidylyltransferase-like VMUT_1846 PF00294 pfkB family carbohydrate kinase VMUT_1848 PF03129 Anticodon binding domain VMUT_1848 PF09180 Prolyl-tRNA synthetase, C-terminal VMUT_1848 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VMUT_1852 PF09334 tRNA synthetases class I (M) VMUT_1852 PF08264 Anticodon-binding domain of tRNA VMUT_1852 PF01588 Putative tRNA binding domain VMUT_1853 PF00675 Insulinase (Peptidase family M16) VMUT_1853 PF05193 Peptidase M16 inactive domain VMUT_1854 PF02146 Sir2 family VMUT_1862 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VMUT_1865 PF09378 HAS barrel domain VMUT_1865 PF01935 Helicase HerA, central domain VMUT_1866 PF17854 FtsK alpha domain VMUT_1866 PF09397 Ftsk gamma domain VMUT_1866 PF01580 FtsK/SpoIIIE family VMUT_1867 PF02675 S-adenosylmethionine decarboxylase VMUT_1868 PF01380 SIS domain VMUT_1869 PF02562 PhoH-like protein VMUT_1871 PF01926 50S ribosome-binding GTPase VMUT_1871 PF01018 GTP1/OBG VMUT_1879 PF16123 Hydroxyacylglutathione hydrolase C-terminus VMUT_1879 PF00753 Metallo-beta-lactamase superfamily VMUT_1880 PF01053 Cys/Met metabolism PLP-dependent enzyme VMUT_1881 PF03807 NADP oxidoreductase coenzyme F420-dependent VMUT_1881 PF14748 Pyrroline-5-carboxylate reductase dimerisation VMUT_1887 PF00248 Aldo/keto reductase family VMUT_1899 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VMUT_1905 PF13732 Domain of unknown function (DUF4162) VMUT_1905 PF00005 ABC transporter VMUT_1911 PF02423 Ornithine cyclodeaminase/mu-crystallin family VMUT_1913 PF00132 Bacterial transferase hexapeptide (six repeats) VMUT_1913 PF12804 MobA-like NTP transferase domain VMUT_1930 PF04055 Radical SAM superfamily VMUT_1931 PF06508 Queuosine biosynthesis protein QueC VMUT_1933 PF02222 ATP-grasp domain VMUT_1933 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VMUT_1934 PF00731 AIR carboxylase VMUT_1935 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VMUT_1935 PF00586 AIR synthase related protein, N-terminal domain VMUT_1935 PF02769 AIR synthase related protein, C-terminal domain VMUT_1936 PF00156 Phosphoribosyl transferase domain VMUT_1937 PF00156 Phosphoribosyl transferase domain VMUT_1938 PF02769 AIR synthase related protein, C-terminal domain VMUT_1938 PF00586 AIR synthase related protein, N-terminal domain VMUT_1939 PF01259 SAICAR synthetase VMUT_1940 PF02844 Phosphoribosylglycinamide synthetase, N domain VMUT_1940 PF02843 Phosphoribosylglycinamide synthetase, C domain VMUT_1940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VMUT_1941 PF02222 ATP-grasp domain VMUT_1946 PF00156 Phosphoribosyl transferase domain VMUT_1953 PF00437 Type II/IV secretion system protein VMUT_1959 PF12838 4Fe-4S dicluster domain VMUT_1961 PF00549 CoA-ligase VMUT_1961 PF02629 CoA binding domain VMUT_1962 PF08442 ATP-grasp domain VMUT_1962 PF00549 CoA-ligase VMUT_1966 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain VMUT_1966 PF05221 S-adenosyl-L-homocysteine hydrolase VMUT_1967 PF17912 MalK OB fold domain VMUT_1967 PF03459 TOBE domain VMUT_1967 PF00005 ABC transporter VMUT_1969 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VMUT_1969 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VMUT_1970 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VMUT_1970 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VMUT_1971 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VMUT_1971 PF00156 Phosphoribosyl transferase domain VMUT_1972 PF01180 Dihydroorotate dehydrogenase VMUT_1977 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VMUT_1977 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VMUT_1981 PF01048 Phosphorylase superfamily VMUT_1986 PF03070 TENA/THI-4/PQQC family VMUT_1987 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VMUT_1989 PF00106 short chain dehydrogenase VMUT_1995 PF00753 Metallo-beta-lactamase superfamily VMUT_2007 PF00578 AhpC/TSA family VMUT_2008 PF02633 Creatinine amidohydrolase VMUT_2013 PF00892 EamA-like transporter family VMUT_2035 PF00701 Dihydrodipicolinate synthetase family VMUT_2036 PF13476 AAA domain VMUT_2047 PF00118 TCP-1/cpn60 chaperonin family VMUT_2049 PF00583 Acetyltransferase (GNAT) family VMUT_2050 PF01676 Metalloenzyme superfamily VMUT_2050 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase VMUT_2051 PF03091 CutA1 divalent ion tolerance protein VMUT_2052 PF00248 Aldo/keto reductase family VMUT_2053 PF02581 Thiamine monophosphate synthase VMUT_2054 PF00924 Mechanosensitive ion channel VMUT_2054 PF05552 Conserved TM helix VMUT_2055 PF01926 50S ribosome-binding GTPase VMUT_2055 PF06071 Protein of unknown function (DUF933) VMUT_2056 PF05746 DALR anticodon binding domain VMUT_2056 PF03485 Arginyl tRNA synthetase N terminal domain VMUT_2056 PF00750 tRNA synthetases class I (R) VMUT_2058 PF04560 RNA polymerase Rpb2, domain 7 VMUT_2058 PF00562 RNA polymerase Rpb2, domain 6 VMUT_2058 PF10385 RNA polymerase beta subunit external 1 domain VMUT_2058 PF04565 RNA polymerase Rpb2, domain 3 VMUT_2058 PF04563 RNA polymerase beta subunit VMUT_2058 PF04561 RNA polymerase Rpb2, domain 2 VMUT_2059 PF04983 RNA polymerase Rpb1, domain 3 VMUT_2059 PF00623 RNA polymerase Rpb1, domain 2 VMUT_2059 PF04998 RNA polymerase Rpb1, domain 5 VMUT_2059 PF05000 RNA polymerase Rpb1, domain 4 VMUT_2059 PF04997 RNA polymerase Rpb1, domain 1 VMUT_2060 PF04998 RNA polymerase Rpb1, domain 5 VMUT_2060 PF05000 RNA polymerase Rpb1, domain 4 VMUT_2060 PF04983 RNA polymerase Rpb1, domain 3 VMUT_2060 PF00623 RNA polymerase Rpb1, domain 2 VMUT_2060 PF04997 RNA polymerase Rpb1, domain 1 VMUT_2061 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family VMUT_2065 PF05496 Holliday junction DNA helicase RuvB P-loop domain VMUT_2065 PF12002 MgsA AAA+ ATPase C terminal VMUT_2065 PF01661 Macro domain VMUT_2065 PF16193 AAA C-terminal domain VMUT_2070 PF00294 pfkB family carbohydrate kinase VMUT_2071 PF07690 Major Facilitator Superfamily VMUT_2074 PF00248 Aldo/keto reductase family VMUT_2076 PF01206 Sulfurtransferase TusA VMUT_2077 PF00708 Acylphosphatase VMUT_2079 PF01416 tRNA pseudouridine synthase VMUT_2081 PF00919 Uncharacterized protein family UPF0004 VMUT_2081 PF04055 Radical SAM superfamily VMUT_2081 PF01938 TRAM domain VMUT_2083 PF00005 ABC transporter VMUT_2084 PF02361 Cobalt transport protein VMUT_2093 PF00694 Aconitase C-terminal domain VMUT_2093 PF00330 Aconitase family (aconitate hydratase) VMUT_2097 PF01513 ATP-NAD kinase VMUT_2101 PF00571 CBS domain VMUT_2101 PF00478 IMP dehydrogenase / GMP reductase domain VMUT_2104 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VMUT_2104 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VMUT_2104 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VMUT_2105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VMUT_2112 PF01975 Survival protein SurE VMUT_2113 PF00133 tRNA synthetases class I (I, L, M and V) VMUT_2113 PF08264 Anticodon-binding domain of tRNA VMUT_2119 PF05362 Lon protease (S16) C-terminal proteolytic domain VMUT_2119 PF00004 ATPase family associated with various cellular activities (AAA) VMUT_2119 PF02190 ATP-dependent protease La (LON) substrate-binding domain VMUT_2124 PF00347 Ribosomal protein L6 VMUT_2134 PF13520 Amino acid permease VMUT_2136 PF01037 Lrp/AsnC ligand binding domain VMUT_2136 PF13404 AsnC-type helix-turn-helix domain VMUT_2139 PF00366 Ribosomal protein S17 VMUT_2140 PF00291 Pyridoxal-phosphate dependent enzyme VMUT_2142 PF00202 Aminotransferase class-III VMUT_2146 PF01654 Cytochrome bd terminal oxidase subunit I VMUT_2147 PF07992 Pyridine nucleotide-disulphide oxidoreductase VMUT_2147 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VMUT_2156 PF02464 Competence-damaged protein VMUT_2156 PF18146 Damage-inducible protein CinA KH domain VMUT_2156 PF00994 Probable molybdopterin binding domain VMUT_2159 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VMUT_2159 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VMUT_2176 PF18389 TrmO C-terminal domain VMUT_2176 PF01980 tRNA-methyltransferase O VMUT_2183 PF08241 Methyltransferase domain VMUT_2186 PF01523 Putative modulator of DNA gyrase VMUT_2188 PF00005 ABC transporter VMUT_2188 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_2189 PF00005 ABC transporter VMUT_2189 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VMUT_2190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VMUT_2191 PF00528 Binding-protein-dependent transport system inner membrane component VMUT_2194 PF07859 alpha/beta hydrolase fold VMUT_2196 PF07664 Ferrous iron transport protein B C terminus VMUT_2196 PF17910 FeoB cytosolic helical domain VMUT_2196 PF07670 Nucleoside recognition VMUT_2196 PF02421 Ferrous iron transport protein B VMUT_2198 PF00490 Delta-aminolevulinic acid dehydratase VMUT_2199 PF00155 Aminotransferase class I and II VMUT_2202 PF10609 NUBPL iron-transfer P-loop NTPase VMUT_2209 PF04055 Radical SAM superfamily VMUT_2211 PF03928 Haem-degrading VMUT_2213 PF01018 GTP1/OBG VMUT_2213 PF01926 50S ribosome-binding GTPase VMUT_2213 PF04055 Radical SAM superfamily VMUT_2218 PF12706 Beta-lactamase superfamily domain VMUT_2218 PF00753 Metallo-beta-lactamase superfamily VMUT_2221 PF07690 Major Facilitator Superfamily VMUT_2223 PF01070 FMN-dependent dehydrogenase VMUT_2225 PF00181 Ribosomal Proteins L2, RNA binding domain VMUT_2225 PF03947 Ribosomal Proteins L2, C-terminal domain VMUT_2234 PF01904 Protein of unknown function DUF72 VMUT_2235 PF07690 Major Facilitator Superfamily VMUT_2237 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VMUT_2238 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VMUT_2238 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VMUT_2241 PF00348 Polyprenyl synthetase VMUT_2246 PF13344 Haloacid dehalogenase-like hydrolase VMUT_2247 PF07690 Major Facilitator Superfamily VMUT_2251 PF01804 Penicillin amidase VMUT_2252 PF00501 AMP-binding enzyme VMUT_2252 PF13193 AMP-binding enzyme C-terminal domain VMUT_2253 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal VMUT_2253 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal VMUT_2254 PF00501 AMP-binding enzyme VMUT_2254 PF13193 AMP-binding enzyme C-terminal domain VMUT_2263 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain VMUT_2263 PF09297 NADH pyrophosphatase zinc ribbon domain VMUT_2263 PF00293 NUDIX domain VMUT_2264 PF07690 Major Facilitator Superfamily VMUT_2265 PF01137 RNA 3'-terminal phosphate cyclase VMUT_2265 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain VMUT_2267 PF00578 AhpC/TSA family VMUT_2273 PF01266 FAD dependent oxidoreductase VMUT_2275 PF13520 Amino acid permease VMUT_2279 PF13732 Domain of unknown function (DUF4162) VMUT_2279 PF00005 ABC transporter VMUT_2281 PF00355 Rieske [2Fe-2S] domain VMUT_2286 PF00753 Metallo-beta-lactamase superfamily VMUT_2286 PF10996 Beta-Casp domain VMUT_2286 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VMUT_2290 PF00501 AMP-binding enzyme VMUT_2290 PF13193 AMP-binding enzyme C-terminal domain VMUT_2296 PF00857 Isochorismatase family VMUT_2298 PF03880 DbpA RNA binding domain VMUT_2298 PF00270 DEAD/DEAH box helicase VMUT_2298 PF00271 Helicase conserved C-terminal domain VMUT_2300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VMUT_2300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VMUT_2300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VMUT_2300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VMUT_2301 PF01048 Phosphorylase superfamily VMUT_2303 PF07690 Major Facilitator Superfamily VMUT_2313 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VMUT_2313 PF13378 Enolase C-terminal domain-like VMUT_2314 PF07690 Major Facilitator Superfamily VMUT_2319 PF00561 alpha/beta hydrolase fold VMUT_2321 PF00145 C-5 cytosine-specific DNA methylase VMUT_2322 PF01950 Fructose-1,6-bisphosphatase VMUT_2326 PF03167 Uracil DNA glycosylase superfamily VMUT_2327 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_2327 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_2327 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_2328 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VMUT_2328 PF02770 Acyl-CoA dehydrogenase, middle domain VMUT_2328 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VMUT_2331 PF07726 ATPase family associated with various cellular activities (AAA) VMUT_2331 PF17863 AAA lid domain VMUT_2334 PF01351 Ribonuclease HII VMUT_2341 PF01593 Flavin containing amine oxidoreductase VMUT_2342 PF00890 FAD binding domain VMUT_2342 PF14537 Cytochrome c3 VMUT_2344 PF01206 Sulfurtransferase TusA VMUT_2347 PF00005 ABC transporter