locus-tag	class	description
H9Q79_00015	COG3845	ABC transporter
H9Q79_00025	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
H9Q79_00030	COG0402	S-adenosylhomocysteine deaminase activity
H9Q79_00035	COG0606	chelatase, subunit chli
H9Q79_00040	COG0758	DNA mediated transformation
H9Q79_00045	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
H9Q79_00055	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
H9Q79_00060	COG0459	protein refolding
H9Q79_00070	COG0516	GMP reductase activity
H9Q79_00070	COG0517	IMP dehydrogenase activity
H9Q79_00100	COG1979	alcohol dehydrogenase
H9Q79_00105	COG0583	DNA-binding transcription factor activity
H9Q79_00115	COG2059	Chromate
H9Q79_00130	COG1131	(ABC) transporter
H9Q79_00165	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
H9Q79_00170	COG0745	RESPONSE REGULATOR receiver
H9Q79_00175	COG0297	glycogen (starch) synthase activity
H9Q79_00180	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
H9Q79_00185	COG2137	regulation of response to DNA damage stimulus
H9Q79_00190	COG1418	mRNA catabolic process
H9Q79_00210	COG1164	Oligoendopeptidase f
H9Q79_00235	COG2801	Transposase and inactivated derivatives
H9Q79_00245	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
H9Q79_00250	COG0210	DNA helicase
H9Q79_00265	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
H9Q79_00270	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
H9Q79_00275	COG1216	Glycosyl transferase, family 2
H9Q79_00280	COG0463	Glycosyl transferase, family 2
H9Q79_00280	COG1216	Glycosyl transferase, family 2
H9Q79_00320	COG0110	maltose O-acetyltransferase activity
H9Q79_00325	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
H9Q79_00330	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
H9Q79_00335	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
H9Q79_00370	COG4509	Sortase family
H9Q79_00380	COG0673	inositol 2-dehydrogenase activity
H9Q79_00390	COG1082	Xylose isomerase domain protein TIM barrel
H9Q79_00400	COG1129	ABC transporter
H9Q79_00410	COG0673	inositol 2-dehydrogenase activity
H9Q79_00415	COG1609	Transcriptional regulator
H9Q79_00420	COG0656	L-ascorbic acid biosynthetic process
H9Q79_00425	COG4152	abc transporter atp-binding protein
H9Q79_00435	COG0561	phosphatase activity
H9Q79_00445	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
H9Q79_00445	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
H9Q79_00455	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
H9Q79_00460	COG2720	vancomycin resistance protein
H9Q79_00465	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
H9Q79_00510	COG0531	amino acid
H9Q79_00535	COG0512	Glutamine amidotransferase of anthranilate synthase
H9Q79_00540	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
H9Q79_00545	COG0134	indole-3-glycerol-phosphate synthase activity
H9Q79_00555	COG0133	tryptophan synthase activity
H9Q79_00560	COG0159	tryptophan synthase activity
H9Q79_00565	COG1027	Aspartate ammonia-lyase
H9Q79_00575	COG2190	(PTS) system
H9Q79_00575	COG2211	Major facilitator Superfamily
H9Q79_00595	COG0477	Major facilitator Superfamily
H9Q79_00600	COG1522	sequence-specific DNA binding
H9Q79_00605	COG1234	tRNA 3'-trailer cleavage
H9Q79_00610	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
H9Q79_00670	COG1595	DNA-templated transcription, initiation
H9Q79_00695	COG1686	Belongs to the peptidase S11 family
H9Q79_00710	COG1215	transferase activity, transferring glycosyl groups
H9Q79_00745	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
H9Q79_00765	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
H9Q79_00770	COG1151	hydroxylamine reductase activity
H9Q79_00820	COG1918	ferrous iron import across plasma membrane
H9Q79_00820	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
H9Q79_00890	COG4974	Belongs to the 'phage' integrase family
H9Q79_00900	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
H9Q79_00905	COG2244	polysaccharide biosynthetic process
H9Q79_00910	COG1959	2 iron, 2 sulfur cluster binding
H9Q79_00920	COG0822	iron-sulfur transferase activity
H9Q79_00925	COG0482	sulfurtransferase activity
H9Q79_00930	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
H9Q79_00940	COG0126	phosphoglycerate kinase activity
H9Q79_00945	COG0149	triose-phosphate isomerase activity
H9Q79_00955	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
H9Q79_00955	COG0574	Belongs to the PEP-utilizing enzyme family
H9Q79_00985	COG1518	maintenance of DNA repeat elements
H9Q79_00990	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
H9Q79_01010	COG0562	UDP-galactopyranose mutase
H9Q79_01020	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_01030	COG0673	inositol 2-dehydrogenase activity
H9Q79_01040	COG4120	Belongs to the binding-protein-dependent transport system permease family
H9Q79_01045	COG1122	ATPase activity
H9Q79_01075	COG0745	RESPONSE REGULATOR receiver
H9Q79_01080	COG2205	protein histidine kinase activity
H9Q79_01105	COG0860	N-Acetylmuramoyl-L-alanine amidase
H9Q79_01110	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
H9Q79_01115	COG1253	flavin adenine dinucleotide binding
H9Q79_01120	COG0653	protein targeting
H9Q79_01125	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
H9Q79_01135	COG0542	response to heat
H9Q79_01140	COG0534	Mate efflux family protein
H9Q79_01150	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
H9Q79_01180	COG0640	Transcriptional regulator
H9Q79_01205	COG3852	Histidine kinase
H9Q79_01210	COG0745	RESPONSE REGULATOR receiver
H9Q79_01225	COG2226	methyltransferase
H9Q79_01230	COG0601	transmembrane transport
H9Q79_01235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
H9Q79_01240	COG0747	negative chemotaxis
H9Q79_01245	COG4172	Belongs to the ABC transporter superfamily
H9Q79_01250	COG4608	Belongs to the ABC transporter superfamily
H9Q79_01255	COG3344	reverse transcriptase
H9Q79_01285	COG0778	Nitroreductase
H9Q79_01290	COG1619	proteins homologs of microcin C7 resistance protein MccF
H9Q79_01295	COG2207	Transcriptional regulator
H9Q79_01295	COG1917	Cupin 2, conserved barrel domain protein
H9Q79_01300	COG0697	spore germination
H9Q79_01320	COG1194	a g-specific adenine glycosylase
H9Q79_01325	COG1216	Glycosyl transferase, family 2
H9Q79_01345	COG0215	cysteine-tRNA ligase activity
H9Q79_01355	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
H9Q79_01410	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
H9Q79_01415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
H9Q79_01430	COG0546	phosphoglycolate phosphatase activity
H9Q79_01435	COG0561	phosphatase activity
H9Q79_01460	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
H9Q79_01470	COG0598	Magnesium transport protein CorA
H9Q79_01475	COG1307	EDD domain protein, DegV family
H9Q79_01485	COG1278	Cold shock
H9Q79_01490	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
H9Q79_01495	COG0284	orotidine-5'-phosphate decarboxylase activity
H9Q79_01505	COG0167	dihydroorotate dehydrogenase activity
H9Q79_01520	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
H9Q79_01545	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
H9Q79_01550	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
H9Q79_01555	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
H9Q79_01560	COG0151	Belongs to the GarS family
H9Q79_01565	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
H9Q79_01595	COG0534	Mate efflux family protein
H9Q79_01645	COG0519	Catalyzes the synthesis of GMP from XMP
H9Q79_01655	COG2197	response regulator
H9Q79_01665	COG2199	diguanylate cyclase activity
H9Q79_01665	COG2200	EAL domain
H9Q79_01685	COG4667	esterase of the alpha-beta hydrolase superfamily
H9Q79_01690	COG1362	aminopeptidase activity
H9Q79_01705	COG1129	ABC transporter
H9Q79_01770	COG0745	RESPONSE REGULATOR receiver
H9Q79_01775	COG5002	protein histidine kinase activity
H9Q79_01795	COG0252	asparaginase activity
H9Q79_01810	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
H9Q79_01815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
H9Q79_01820	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
H9Q79_01825	COG0668	transmembrane transport
H9Q79_01835	COG0779	Required for maturation of 30S ribosomal subunits
H9Q79_01840	COG0195	Participates in both transcription termination and antitermination
H9Q79_01845	COG2740	Nucleic-acid-binding protein implicated in transcription termination
H9Q79_01855	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
H9Q79_01855	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
H9Q79_01860	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
H9Q79_01865	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
H9Q79_01870	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
H9Q79_01875	COG0196	riboflavin kinase activity
H9Q79_01880	COG4496	protein, YerC YecD
H9Q79_01890	COG1609	Transcriptional regulator
H9Q79_01915	COG0110	maltose O-acetyltransferase activity
H9Q79_01930	COG4214	carbohydrate transport
H9Q79_01950	COG1609	Transcriptional regulator
H9Q79_01975	COG0107	imidazoleglycerol-phosphate synthase activity
H9Q79_02005	COG0343	queuine tRNA-ribosyltransferase activity
H9Q79_02010	COG1862	Preprotein translocase
H9Q79_02025	COG0028	Belongs to the TPP enzyme family
H9Q79_02030	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
H9Q79_02035	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
H9Q79_02050	COG3835	regulator
H9Q79_02055	COG1368	sulfuric ester hydrolase activity
H9Q79_02065	COG5012	cobalamin binding
H9Q79_02075	COG0488	(ABC) transporter
H9Q79_02085	COG0420	3'-5' exonuclease activity
H9Q79_02090	COG0419	ATPase involved in DNA repair
H9Q79_02130	COG0726	polysaccharide deacetylase
H9Q79_02140	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
H9Q79_02160	COG1242	4 iron, 4 sulfur cluster binding
H9Q79_02165	COG0295	cytidine deaminase activity
H9Q79_02170	COG0460	homoserine dehydrogenase
H9Q79_02175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
H9Q79_02180	COG0765	amino acid transport
H9Q79_02185	COG1126	abc transporter atp-binding protein
H9Q79_02190	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
H9Q79_02195	COG1490	D-aminoacyl-tRNA deacylase activity
H9Q79_02205	COG0515	serine threonine protein kinase
H9Q79_02215	COG0148	phosphopyruvate hydratase activity
H9Q79_02220	COG2843	Capsule synthesis protein
H9Q79_02225	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
H9Q79_02230	COG0557	exoribonuclease II activity
H9Q79_02235	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
H9Q79_02245	COG0745	RESPONSE REGULATOR receiver
H9Q79_02250	COG5002	protein histidine kinase activity
H9Q79_02270	COG0360	Binds together with S18 to 16S ribosomal RNA
H9Q79_02275	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
H9Q79_02305	COG3546	catalase activity
H9Q79_02320	COG1392	Phosphate transport regulator
H9Q79_02325	COG0306	phosphate transporter
H9Q79_02330	COG0584	glycerophosphoryl diester phosphodiesterase
H9Q79_02335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
H9Q79_02340	COG0772	Belongs to the SEDS family
H9Q79_02345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
H9Q79_02350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
H9Q79_02355	COG0210	DNA helicase
H9Q79_02360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
H9Q79_02365	COG1115	amino acid carrier protein
H9Q79_02380	COG0237	dephospho-CoA kinase activity
H9Q79_02385	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
H9Q79_02395	COG2848	UPF0210 protein
H9Q79_02405	COG3870	Protein conserved in bacteria
H9Q79_02410	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H9Q79_02430	COG2205	protein histidine kinase activity
H9Q79_02435	COG2205	protein histidine kinase activity
H9Q79_02440	COG0745	RESPONSE REGULATOR receiver
H9Q79_02450	COG2205	protein histidine kinase activity
H9Q79_02455	COG0745	RESPONSE REGULATOR receiver
H9Q79_02465	COG0280	phosphate acetyltransferase
H9Q79_02480	COG0333	Belongs to the bacterial ribosomal protein bL32 family
H9Q79_02490	COG0416	fatty acid biosynthetic process
H9Q79_02495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
H9Q79_02500	COG0571	ribonuclease III activity
H9Q79_02505	COG1196	nuclear chromosome segregation
H9Q79_02510	COG0552	protein localization to endoplasmic reticulum
H9Q79_02515	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
H9Q79_02525	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
H9Q79_02530	COG1116	anion transmembrane transporter activity
H9Q79_02540	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
H9Q79_02545	COG0165	Argininosuccinate lyase
H9Q79_02555	COG2116	formate transmembrane transporter activity
H9Q79_02565	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
H9Q79_02565	COG0551	DNA topoisomerase type I activity
H9Q79_02600	COG2388	GCN5-related N-acetyl-transferase
H9Q79_02605	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_02610	COG2162	N-hydroxyarylamine O-acetyltransferase activity
H9Q79_02620	COG2162	N-hydroxyarylamine O-acetyltransferase activity
H9Q79_02645	COG0598	Magnesium transport protein CorA
H9Q79_02655	COG1418	mRNA catabolic process
H9Q79_02660	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
H9Q79_02665	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
H9Q79_02665	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
H9Q79_02680	COG1773	rubredoxin
H9Q79_02680	COG0426	domain, Protein
H9Q79_02695	COG0475	glutathione-regulated potassium exporter activity
H9Q79_02710	COG0583	DNA-binding transcription factor activity
H9Q79_02735	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
H9Q79_02735	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
H9Q79_02740	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
H9Q79_02745	COG2226	methyltransferase
H9Q79_02765	COG2226	methyltransferase
H9Q79_02775	COG0768	penicillin binding
H9Q79_02790	COG1137	ATPase activity
H9Q79_02795	COG0719	Fe-S assembly protein
H9Q79_02800	COG0534	Mate efflux family protein
H9Q79_02830	COG0561	phosphatase activity
H9Q79_02855	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
H9Q79_02860	COG0352	thiamine-phosphate diphosphorylase activity
H9Q79_02865	COG0351	phosphomethylpyrimidine kinase
H9Q79_02865	COG0352	thiamine-phosphate diphosphorylase activity
H9Q79_02890	COG0110	maltose O-acetyltransferase activity
H9Q79_02905	COG0530	calcium, potassium:sodium antiporter activity
H9Q79_02910	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
H9Q79_02935	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
H9Q79_02945	COG0187	DNA topoisomerase II activity
H9Q79_02950	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
H9Q79_02990	COG1349	DNA-binding transcription factor activity
H9Q79_02995	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
H9Q79_03010	COG1129	ABC transporter
H9Q79_03015	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_03020	COG1063	alcohol dehydrogenase
H9Q79_03025	COG0372	Belongs to the citrate synthase family
H9Q79_03035	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
H9Q79_03050	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
H9Q79_03060	COG0336	Belongs to the RNA methyltransferase TrmD family
H9Q79_03065	COG0335	large ribosomal subunit rRNA binding
H9Q79_03075	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
H9Q79_03080	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
H9Q79_03085	COG0792	nuclease activity
H9Q79_03090	COG1496	oxidoreductase activity
H9Q79_03110	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
H9Q79_03120	COG0656	L-ascorbic acid biosynthetic process
H9Q79_03145	COG1151	hydroxylamine reductase activity
H9Q79_03185	COG2759	Belongs to the formate--tetrahydrofolate ligase family
H9Q79_03190	COG3404	Formiminotransferase-cyclodeaminase
H9Q79_03195	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
H9Q79_03200	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
H9Q79_03210	COG2304	oxidoreductase activity
H9Q79_03215	COG4412	M6 family metalloprotease domain protein
H9Q79_03215	COG1404	Belongs to the peptidase S8 family
H9Q79_03230	COG2385	sporulation resulting in formation of a cellular spore
H9Q79_03235	COG1295	ribonuclease BN
H9Q79_03240	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
H9Q79_03245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
H9Q79_03245	COG0072	phenylalanine-tRNA ligase activity
H9Q79_03250	COG0588	phosphoglycerate mutase activity
H9Q79_03255	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
H9Q79_03260	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
H9Q79_03265	COG2205	protein histidine kinase activity
H9Q79_03280	COG1136	(ABC) transporter
H9Q79_03295	COG2207	Transcriptional regulator
H9Q79_03295	COG3708	Transcriptional regulator
H9Q79_03330	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
H9Q79_03345	COG1013	pyruvate-flavodoxin oxidoreductase activity
H9Q79_03380	COG2195	Cleaves the N-terminal amino acid of tripeptides
H9Q79_03400	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
H9Q79_03430	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
H9Q79_03435	COG0232	Belongs to the dGTPase family. Type 2 subfamily
H9Q79_03440	COG0358	DNA primase activity
H9Q79_03445	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
H9Q79_03460	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
H9Q79_03470	COG0424	maF-like protein
H9Q79_03485	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
H9Q79_03495	COG1151	hydroxylamine reductase activity
H9Q79_03505	COG2357	RelA SpoT domain protein
H9Q79_03510	COG0235	Class ii aldolase
H9Q79_03525	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
H9Q79_03530	COG0443	Heat shock 70 kDa protein
H9Q79_03535	COG0540	Belongs to the ATCase OTCase family
H9Q79_03550	COG0285	dihydrofolate synthase activity
H9Q79_03555	COG1605	Chorismate mutase
H9Q79_03555	COG0077	Prephenate dehydratase
H9Q79_03565	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
H9Q79_03570	COG0613	PHP domain protein
H9Q79_03595	COG3550	peptidyl-serine autophosphorylation
H9Q79_03635	COG2195	Cleaves the N-terminal amino acid of tripeptides
H9Q79_03645	COG1070	Carbohydrate kinase
H9Q79_03650	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
H9Q79_03655	COG3437	response regulator, receiver
H9Q79_03670	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
H9Q79_03690	COG2155	Conserved Protein
H9Q79_03695	COG0440	acetolactate synthase activity
H9Q79_03705	COG0583	DNA-binding transcription factor activity
H9Q79_03710	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
H9Q79_03715	COG0066	3-isopropylmalate dehydratase activity
H9Q79_03735	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
H9Q79_03750	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
H9Q79_03760	COG1132	(ABC) transporter
H9Q79_03775	COG1394	ATPase activity, coupled to movement of substances
H9Q79_03780	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
H9Q79_03785	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
H9Q79_03790	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
H9Q79_03805	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
H9Q79_03810	COG1269	ATP hydrolysis coupled proton transport
H9Q79_03820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
H9Q79_03825	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
H9Q79_03830	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
H9Q79_03840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
H9Q79_03840	COG0512	Glutamine amidotransferase of anthranilate synthase
H9Q79_03845	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
H9Q79_03850	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
H9Q79_03860	COG0232	Belongs to the dGTPase family. Type 2 subfamily
H9Q79_03865	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
H9Q79_03875	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
H9Q79_03895	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
H9Q79_03970	COG0310	cobalt ion transport
H9Q79_03980	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
H9Q79_03985	COG1648	precorrin-2 dehydrogenase activity
H9Q79_03985	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
H9Q79_04000	COG0113	porphobilinogen synthase activity
H9Q79_04005	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
H9Q79_04010	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
H9Q79_04015	COG0328	RNA-DNA hybrid ribonuclease activity
H9Q79_04045	COG0714	Associated with various cellular activities
H9Q79_04095	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
H9Q79_04100	COG0828	Belongs to the bacterial ribosomal protein bS21 family
H9Q79_04105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
H9Q79_04110	COG1686	Belongs to the peptidase S11 family
H9Q79_04115	COG1408	metallophosphoesterase
H9Q79_04120	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
H9Q79_04130	COG4555	ABC transporter
H9Q79_04150	COG1176	ABC-type spermidine putrescine transport system, permease component I
H9Q79_04155	COG3842	ATPase activity
H9Q79_04160	COG1686	Belongs to the peptidase S11 family
H9Q79_04175	COG1132	(ABC) transporter
H9Q79_04180	COG0205	6-phosphofructokinase activity
H9Q79_04185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
H9Q79_04195	COG5016	pyruvate
H9Q79_04195	COG0511	ligase activity, forming carbon-carbon bonds
H9Q79_04200	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
H9Q79_04210	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
H9Q79_04220	COG1561	YicC-like family, N-terminal region
H9Q79_04230	COG0194	GDP metabolic process
H9Q79_04235	COG1758	RNA polymerase activity
H9Q79_04240	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H9Q79_04245	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
H9Q79_04250	COG1058	Belongs to the CinA family
H9Q79_04250	COG1546	Belongs to the CinA family
H9Q79_04280	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
H9Q79_04285	COG0504	CTP synthase activity
H9Q79_04290	COG0067	glutamate synthase
H9Q79_04290	COG0069	glutamate synthase activity
H9Q79_04290	COG0070	glutamate synthase
H9Q79_04295	COG0493	'glutamate synthase
H9Q79_04310	COG0436	Aminotransferase
H9Q79_04315	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
H9Q79_04330	COG1404	Belongs to the peptidase S8 family
H9Q79_04335	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
H9Q79_04340	COG1802	Transcriptional regulator
H9Q79_04355	COG1132	(ABC) transporter
H9Q79_04360	COG1132	(ABC) transporter
H9Q79_04370	COG0488	(ABC) transporter
H9Q79_04380	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
H9Q79_04380	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
H9Q79_04385	COG2337	Toxic component of a toxin-antitoxin (TA) module
H9Q79_04390	COG0217	transcriptional regulatory protein
H9Q79_04395	COG0740	serine-type endopeptidase activity
H9Q79_04400	COG1968	undecaprenyl-diphosphatase activity
H9Q79_04420	COG0493	'glutamate synthase
H9Q79_04420	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
H9Q79_04425	COG0544	peptidyl-prolyl cis-trans isomerase activity
H9Q79_04430	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
H9Q79_04460	COG1702	phosphate starvation-inducible protein PhoH
H9Q79_04465	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
H9Q79_04490	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
H9Q79_04495	COG4224	UPF0291 protein
H9Q79_04500	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
H9Q79_04525	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H9Q79_04530	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
H9Q79_04540	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
H9Q79_04545	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
H9Q79_04550	COG2081	HI0933 family
H9Q79_04555	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
H9Q79_04560	COG2003	Belongs to the UPF0758 family
H9Q79_04580	COG0768	penicillin binding
H9Q79_04585	COG2894	cell division
H9Q79_04590	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
H9Q79_04600	COG1803	Methylglyoxal synthase
H9Q79_04605	COG1686	Belongs to the peptidase S11 family
H9Q79_04615	COG0747	negative chemotaxis
H9Q79_04620	COG0601	transmembrane transport
H9Q79_04630	COG0444	Belongs to the ABC transporter superfamily
H9Q79_04635	COG4608	Belongs to the ABC transporter superfamily
H9Q79_04640	COG0583	DNA-binding transcription factor activity
H9Q79_04650	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
H9Q79_04655	COG1799	cell septum assembly
H9Q79_04665	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
H9Q79_04675	COG0564	pseudouridine synthase activity
H9Q79_04685	COG0037	tRNA processing
H9Q79_04690	COG0628	permease
H9Q79_04695	COG4974	Belongs to the 'phage' integrase family
H9Q79_04755	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
H9Q79_04760	COG0799	negative regulation of ribosome biogenesis
H9Q79_04765	COG1713	HD superfamily hydrolase involved in NAD metabolism
H9Q79_04770	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
H9Q79_04775	COG1534	Rna-binding protein
H9Q79_04785	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
H9Q79_04805	COG1307	EDD domain protein, DegV family
H9Q79_04825	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H9Q79_04850	COG0131	Imidazoleglycerol-phosphate dehydratase
H9Q79_04855	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
H9Q79_04860	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
H9Q79_04865	COG0124	histidyl-tRNA synthetase
H9Q79_04870	COG3331	DNA recombination
H9Q79_04880	COG0564	pseudouridine synthase activity
H9Q79_04895	COG1187	pseudouridine synthase activity
H9Q79_04900	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
H9Q79_04900	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
H9Q79_04905	COG2357	RelA SpoT domain protein
H9Q79_04915	COG2195	Cleaves the N-terminal amino acid of tripeptides
H9Q79_04920	COG3314	Sporulation integral membrane protein YlbJ
H9Q79_04930	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
H9Q79_04935	COG0742	ribosomal rna small subunit methyltransferase
H9Q79_04940	COG1803	Methylglyoxal synthase
H9Q79_04955	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
H9Q79_04960	COG1461	Dihydroxyacetone kinase
H9Q79_04970	COG0227	Belongs to the bacterial ribosomal protein bL28 family
H9Q79_05000	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
H9Q79_05015	COG1459	type II secretion system
H9Q79_05020	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
H9Q79_05035	COG1803	Methylglyoxal synthase
H9Q79_05070	COG0826	peptidase U32
H9Q79_05080	COG2255	four-way junction helicase activity
H9Q79_05085	COG0632	four-way junction helicase activity
H9Q79_05105	COG2878	Part of a membrane complex involved in electron transport
H9Q79_05110	COG4657	Part of a membrane complex involved in electron transport
H9Q79_05115	COG4660	Part of a membrane complex involved in electron transport
H9Q79_05120	COG4659	FMN binding
H9Q79_05125	COG4658	electron transport chain
H9Q79_05130	COG4656	Part of a membrane complex involved in electron transport
H9Q79_05140	COG0539	negative regulation of cytoplasmic translation
H9Q79_05140	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
H9Q79_05145	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
H9Q79_05150	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
H9Q79_05155	COG2081	HI0933 family
H9Q79_05175	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_05180	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_05185	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_05190	COG0281	malic enzyme
H9Q79_05195	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
H9Q79_05200	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
H9Q79_05205	COG1070	Carbohydrate kinase
H9Q79_05215	COG1472	Belongs to the glycosyl hydrolase 3 family
H9Q79_05225	COG0495	leucyl-tRNA aminoacylation
H9Q79_05235	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
H9Q79_05240	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
H9Q79_05245	COG0287	Prephenate dehydrogenase
H9Q79_05250	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
H9Q79_05270	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
H9Q79_05275	COG2086	electron transfer activity
H9Q79_05280	COG1960	acyl-CoA dehydrogenase activity
H9Q79_05285	COG1250	3-hydroxyacyl-CoA dehydrogenase
H9Q79_05290	COG1024	Enoyl-CoA hydratase
H9Q79_05295	COG0183	Belongs to the thiolase family
H9Q79_05300	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
H9Q79_05310	COG0095	Lipoate-protein ligase
H9Q79_05315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H9Q79_05320	COG0508	dehydrogenase complex catalyzes the overall conversion of
H9Q79_05325	COG0022	dehydrogenase e1 component
H9Q79_05330	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
H9Q79_05345	COG1960	acyl-CoA dehydrogenase activity
H9Q79_05350	COG1070	Carbohydrate kinase
H9Q79_05360	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_05365	COG1129	ABC transporter
H9Q79_05370	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
H9Q79_05375	COG1882	Formate acetyltransferase
H9Q79_05385	COG0280	phosphate acetyltransferase
H9Q79_05390	COG0280	phosphate acetyltransferase
H9Q79_05395	COG3426	butyrate kinase activity
H9Q79_05415	COG3069	C4-dicarboxylate transmembrane transporter activity
H9Q79_05450	COG0436	Aminotransferase
H9Q79_05455	COG1522	sequence-specific DNA binding
H9Q79_05525	COG0750	zinc metalloprotease
H9Q79_05535	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
H9Q79_05540	COG0233	cytoplasmic translational termination
H9Q79_05545	COG0528	UMP kinase activity
H9Q79_05555	COG0527	aspartate kinase activity
H9Q79_05560	COG0436	Aminotransferase
H9Q79_05575	COG0708	Exodeoxyribonuclease III
H9Q79_05580	COG1982	Orn Lys Arg decarboxylase major
H9Q79_05585	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
H9Q79_05590	COG3906	Belongs to the UPF0473 family
H9Q79_05595	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
H9Q79_05600	COG0756	dUTP diphosphatase activity
H9Q79_05605	COG0602	queuosine metabolic process
H9Q79_05610	COG1185	polyribonucleotide nucleotidyltransferase activity
H9Q79_05615	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
H9Q79_05625	COG3408	Glycogen debranching enzyme
H9Q79_05630	COG4608	Belongs to the ABC transporter superfamily
H9Q79_05640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
H9Q79_05655	COG2972	Histidine kinase
H9Q79_05660	COG2207	Transcriptional regulator
H9Q79_05660	COG4753	response regulator
H9Q79_05685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
H9Q79_05695	COG1131	(ABC) transporter
H9Q79_05730	COG0251	oxidation-reduction process
H9Q79_05745	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
H9Q79_05750	COG0363	glucosamine-6-phosphate deaminase activity
H9Q79_05765	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
H9Q79_05770	COG0191	fructose-bisphosphate aldolase activity
H9Q79_05780	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
H9Q79_05785	COG0673	inositol 2-dehydrogenase activity
H9Q79_05790	COG0673	inositol 2-dehydrogenase activity
H9Q79_05820	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
H9Q79_05845	COG0471	metal ion transport
H9Q79_05845	COG0490	domain, Protein
H9Q79_05850	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
H9Q79_05855	COG0745	RESPONSE REGULATOR receiver
H9Q79_05860	COG2205	protein histidine kinase activity
H9Q79_05865	COG0246	Mannitol dehydrogenase
H9Q79_05870	COG1312	Catalyzes the dehydration of D-mannonate
H9Q79_05875	COG1129	ABC transporter
H9Q79_05880	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_05885	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_05890	COG0006	proline dipeptidase activity
H9Q79_05895	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
H9Q79_05905	COG2084	Dehydrogenase
H9Q79_05920	COG1606	tRNA processing
H9Q79_05925	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
H9Q79_05930	COG1691	(AIR) carboxylase
H9Q79_05935	COG4536	flavin adenine dinucleotide binding
H9Q79_05950	COG3409	Peptidoglycan-binding domain 1 protein
H9Q79_05950	COG3773	Cell wall hydrolase
H9Q79_05975	COG0052	Belongs to the universal ribosomal protein uS2 family
H9Q79_05995	COG1278	Cold shock
H9Q79_06020	COG0577	efflux transmembrane transporter activity
H9Q79_06030	COG1136	(ABC) transporter
H9Q79_06045	COG1131	(ABC) transporter
H9Q79_06050	COG1725	Transcriptional regulator
H9Q79_06055	COG1687	branched-chain amino acid
H9Q79_06060	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
H9Q79_06070	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
H9Q79_06075	COG0124	histidyl-tRNA synthetase
H9Q79_06080	COG3437	response regulator, receiver
H9Q79_06080	COG2770	Histidine kinase
H9Q79_06085	COG0635	Involved in the biosynthesis of porphyrin-containing compound
H9Q79_06090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H9Q79_06095	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
H9Q79_06100	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
H9Q79_06105	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
H9Q79_06105	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
H9Q79_06110	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
H9Q79_06110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
H9Q79_06155	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
H9Q79_06160	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
H9Q79_06165	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H9Q79_06170	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H9Q79_06180	COG3901	Regulator of nitric oxide reductase transcription
H9Q79_06180	COG0348	domain, Protein
H9Q79_06200	COG1733	regulation of RNA biosynthetic process
H9Q79_06215	COG0275	rRNA processing
H9Q79_06220	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
H9Q79_06245	COG1917	Cupin 2, conserved barrel domain protein
H9Q79_06245	COG1396	sequence-specific DNA binding
H9Q79_06255	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
H9Q79_06275	COG0439	Biotin carboxylase
H9Q79_06280	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
H9Q79_06285	COG0511	ligase activity, forming carbon-carbon bonds
H9Q79_06290	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
H9Q79_06295	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_06300	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
H9Q79_06305	COG2070	2-Nitropropane dioxygenase
H9Q79_06310	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
H9Q79_06340	COG3842	ATPase activity
H9Q79_06345	COG1737	Transcriptional regulator
H9Q79_06370	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
H9Q79_06375	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
H9Q79_06405	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
H9Q79_06410	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
H9Q79_06420	COG0372	Belongs to the citrate synthase family
H9Q79_06425	COG0640	Transcriptional regulator
H9Q79_06430	COG0436	Aminotransferase
H9Q79_06445	COG1174	glycine betaine transport
H9Q79_06450	COG1125	glycine betaine transport
H9Q79_06450	COG0517	IMP dehydrogenase activity
H9Q79_06455	COG5598	trimethylamine methyltransferase
H9Q79_06465	COG0646	methionine synthase
H9Q79_06465	COG1410	methionine synthase
H9Q79_06470	COG1410	methionine synthase
H9Q79_06470	COG0646	methionine synthase
H9Q79_06475	COG5012	cobalamin binding
H9Q79_06480	COG2188	Transcriptional regulator
H9Q79_06500	COG2801	Transposase and inactivated derivatives
H9Q79_06515	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
H9Q79_06520	COG4120	Belongs to the binding-protein-dependent transport system permease family
H9Q79_06545	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
H9Q79_06550	COG4260	virion core protein, lumpy skin disease virus
H9Q79_06560	COG1842	Phage shock protein A
H9Q79_06600	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
H9Q79_06605	COG1518	maintenance of DNA repeat elements
H9Q79_06635	COG3620	sequence-specific DNA binding
H9Q79_06640	COG0726	polysaccharide deacetylase
H9Q79_06660	COG1132	(ABC) transporter
H9Q79_06665	COG1132	(ABC) transporter
H9Q79_06690	COG2972	Histidine kinase
H9Q79_06700	COG1129	ABC transporter
H9Q79_06705	COG0006	proline dipeptidase activity
H9Q79_06710	COG3547	Transposase (IS116 IS110 IS902 family)
H9Q79_06715	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_06720	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_06725	COG1129	ABC transporter
H9Q79_06730	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_06735	COG3177	Filamentation induced by cAMP protein fic
H9Q79_06740	COG0534	Mate efflux family protein
H9Q79_06745	COG0534	Mate efflux family protein
H9Q79_06755	COG0534	Mate efflux family protein
H9Q79_06765	COG4806	L-rhamnose isomerase
H9Q79_06770	COG1070	Carbohydrate kinase
H9Q79_06780	COG2972	Histidine kinase
H9Q79_06790	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_06795	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_06800	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_06805	COG1129	ABC transporter
H9Q79_06810	COG3254	rhamnose metabolic process
H9Q79_06815	COG1381	Involved in DNA repair and RecF pathway recombination
H9Q79_06820	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
H9Q79_06845	COG0674	pyruvate-flavodoxin oxidoreductase activity
H9Q79_06845	COG1013	pyruvate-flavodoxin oxidoreductase activity
H9Q79_06845	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
H9Q79_06845	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
H9Q79_06855	COG1501	Belongs to the glycosyl hydrolase 31 family
H9Q79_06860	COG0395	ABC-type sugar transport system, permease component
H9Q79_06865	COG1175	transmembrane transport
H9Q79_06870	COG2972	Histidine kinase
H9Q79_06875	COG4753	response regulator
H9Q79_06875	COG2207	Transcriptional regulator
H9Q79_06885	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_06895	COG0488	(ABC) transporter
H9Q79_06905	COG0191	fructose-bisphosphate aldolase activity
H9Q79_06910	COG0205	6-phosphofructokinase activity
H9Q79_06915	COG0698	ribose 5-phosphate isomerase
H9Q79_06925	COG0427	acetyl-CoA hydrolase
H9Q79_06935	COG1454	alcohol dehydrogenase
H9Q79_06940	COG3958	Transketolase
H9Q79_06945	COG3959	Transketolase, thiamine diphosphate binding domain
H9Q79_06955	COG0095	Lipoate-protein ligase
H9Q79_06960	COG1063	alcohol dehydrogenase
H9Q79_06970	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H9Q79_06975	COG0508	dehydrogenase complex catalyzes the overall conversion of
H9Q79_06980	COG0022	dehydrogenase e1 component
H9Q79_06985	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
H9Q79_06995	COG0411	ABC transporter
H9Q79_07015	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_07025	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
H9Q79_07040	COG0281	malic enzyme
H9Q79_07065	COG0564	pseudouridine synthase activity
H9Q79_07080	COG1854	S-ribosylhomocysteine lyase activity
H9Q79_07085	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
H9Q79_07090	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
H9Q79_07095	COG1160	GTP binding
H9Q79_07100	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
H9Q79_07115	COG1196	nuclear chromosome segregation
H9Q79_07120	COG0613	PHP domain protein
H9Q79_07150	COG3547	Transposase (IS116 IS110 IS902 family)
H9Q79_07165	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
H9Q79_07170	COG0277	FAD linked oxidase domain protein
H9Q79_07175	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
H9Q79_07180	COG2086	electron transfer activity
H9Q79_07185	COG2186	Transcriptional regulator
H9Q79_07210	COG0628	permease
H9Q79_07215	COG0069	glutamate synthase activity
H9Q79_07220	COG2270	Major facilitator Superfamily
H9Q79_07240	COG0641	radical SAM
H9Q79_07250	COG0733	neurotransmitter:sodium symporter activity
H9Q79_07280	COG0010	Belongs to the arginase family
H9Q79_07285	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
H9Q79_07290	COG1982	Orn Lys Arg decarboxylase major
H9Q79_07310	COG0673	inositol 2-dehydrogenase activity
H9Q79_07315	COG0673	inositol 2-dehydrogenase activity
H9Q79_07330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
H9Q79_07330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
H9Q79_07340	COG4978	Transcriptional regulator
H9Q79_07340	COG0789	Transcriptional regulator
H9Q79_07385	COG1335	isochorismatase
H9Q79_07390	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
H9Q79_07400	COG0281	malic enzyme
H9Q79_07405	COG2301	Belongs to the HpcH HpaI aldolase family
H9Q79_07420	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
H9Q79_07425	COG1070	Carbohydrate kinase
H9Q79_07430	COG1979	alcohol dehydrogenase
H9Q79_07445	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_07455	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
H9Q79_07475	COG0402	S-adenosylhomocysteine deaminase activity
H9Q79_07485	COG1079	Belongs to the binding-protein-dependent transport system permease family
H9Q79_07490	COG4603	Belongs to the binding-protein-dependent transport system permease family
H9Q79_07495	COG3845	ABC transporter
H9Q79_07500	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
H9Q79_07505	COG1307	EDD domain protein, DegV family
H9Q79_07525	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
H9Q79_07530	COG5002	protein histidine kinase activity
H9Q79_07530	COG3850	Histidine kinase
H9Q79_07545	COG1454	alcohol dehydrogenase
H9Q79_07550	COG1012	belongs to the aldehyde dehydrogenase family
H9Q79_07560	COG0789	Transcriptional regulator
H9Q79_07575	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
H9Q79_07580	COG0101	tRNA pseudouridine synthase activity
H9Q79_07585	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
H9Q79_07590	COG1122	ATPase activity
H9Q79_07595	COG1122	ATPase activity
H9Q79_07600	COG0218	Necessary for normal cell division and for the maintenance of normal septation
H9Q79_07605	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
H9Q79_07610	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
H9Q79_07630	COG0693	protein deglycase activity
H9Q79_07635	COG2954	triphosphatase activity
H9Q79_07645	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
H9Q79_07650	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
H9Q79_07660	COG0367	asparagine synthase
H9Q79_07665	COG0564	pseudouridine synthase activity
H9Q79_07670	COG0577	efflux transmembrane transporter activity
H9Q79_07675	COG1136	(ABC) transporter
H9Q79_07680	COG5002	protein histidine kinase activity
H9Q79_07685	COG0745	RESPONSE REGULATOR receiver
H9Q79_07690	COG1393	Belongs to the ArsC family
H9Q79_07700	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
H9Q79_07715	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
H9Q79_07725	COG0778	Nitroreductase
H9Q79_07735	COG1489	DNA binding
H9Q79_07740	COG1720	tRNA m6t6A37 methyltransferase activity
H9Q79_07750	COG0463	Glycosyl transferase, family 2
H9Q79_07770	COG3835	regulator
H9Q79_07785	COG0531	amino acid
H9Q79_07790	COG2814	Major facilitator Superfamily
H9Q79_07795	COG1309	transcriptional regulator
H9Q79_07845	COG2337	Toxic component of a toxin-antitoxin (TA) module
H9Q79_07875	COG0798	PFAM Bile acid sodium symporter
H9Q79_07880	COG0640	Transcriptional regulator
H9Q79_07895	COG0701	Predicted permease
H9Q79_07900	COG0640	Transcriptional regulator
H9Q79_07905	COG0791	NLP P60 protein
H9Q79_07905	COG0741	lytic transglycosylase activity
H9Q79_07910	COG4509	Sortase family
H9Q79_07955	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
H9Q79_07960	COG3481	metal-dependent phosphohydrolase, HD sub domain
H9Q79_07965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
H9Q79_07970	COG1193	negative regulation of DNA recombination
H9Q79_07975	COG0745	RESPONSE REGULATOR receiver
H9Q79_07980	COG5002	protein histidine kinase activity
H9Q79_08000	COG2211	Major facilitator Superfamily
H9Q79_08025	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
H9Q79_08035	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
H9Q79_08040	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
H9Q79_08045	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
H9Q79_08050	COG0038	chloride channel
H9Q79_08070	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
H9Q79_08075	COG0583	DNA-binding transcription factor activity
H9Q79_08095	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
H9Q79_08100	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
H9Q79_08105	COG0438	transferase activity, transferring glycosyl groups
H9Q79_08105	COG1216	Glycosyl transferase, family 2
H9Q79_08115	COG1134	teichoic acid transport
H9Q79_08120	COG1682	transport, permease protein
H9Q79_08125	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
H9Q79_08145	COG1376	ErfK ybiS ycfS ynhG family protein
H9Q79_08190	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
H9Q79_08195	COG0028	Belongs to the TPP enzyme family
H9Q79_08200	COG0463	Glycosyl transferase, family 2
H9Q79_08220	COG1316	TRANSCRIPTIONal
H9Q79_08300	COG1396	sequence-specific DNA binding
H9Q79_08315	COG1316	TRANSCRIPTIONal
H9Q79_08330	COG0463	Glycosyl transferase, family 2
H9Q79_08335	COG1216	Glycosyl transferase, family 2
H9Q79_08335	COG0438	transferase activity, transferring glycosyl groups
H9Q79_08340	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
H9Q79_08345	COG0463	Glycosyl transferase, family 2
H9Q79_08365	COG0151	Belongs to the GarS family
H9Q79_08375	COG1091	dTDP-4-dehydrorhamnose reductase activity
H9Q79_08385	COG1686	Belongs to the peptidase S11 family
H9Q79_08390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
H9Q79_08400	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
H9Q79_08415	COG1040	competence protein
H9Q79_08420	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
H9Q79_08425	COG1077	Cell shape determining protein MreB Mrl
H9Q79_08435	COG3949	Membrane
H9Q79_08440	COG1475	DNA binding
H9Q79_08445	COG3969	phosphoadenosine phosphosulfate
H9Q79_08450	COG0635	Involved in the biosynthesis of porphyrin-containing compound
H9Q79_08455	COG0481	GTPase activity
H9Q79_08470	COG0268	Binds directly to 16S ribosomal RNA
H9Q79_08475	COG1466	dna polymerase III delta subunit
H9Q79_08480	COG0463	Glycosyl transferase, family 2
H9Q79_08495	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_08505	COG1129	ABC transporter
H9Q79_08515	COG1063	alcohol dehydrogenase
H9Q79_08535	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
H9Q79_08540	COG2333	competence protein COMEC
H9Q79_08540	COG0658	competence protein
H9Q79_08555	COG0745	RESPONSE REGULATOR receiver
H9Q79_08560	COG1555	photosystem II stabilization
H9Q79_08560	COG1596	polysaccharide export
H9Q79_08575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
H9Q79_08580	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
H9Q79_08585	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
H9Q79_08590	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
H9Q79_08605	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
H9Q79_08620	COG1263	PTS System
H9Q79_08620	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
H9Q79_08620	COG2190	(PTS) system
H9Q79_08625	COG1609	Transcriptional regulator
H9Q79_08640	COG5001	Diguanylate cyclase
H9Q79_08650	COG0793	Belongs to the peptidase S41A family
H9Q79_08655	COG2177	Part of the ABC transporter FtsEX involved in
H9Q79_08660	COG2884	Cell division ATP-binding protein ftsE
H9Q79_08665	COG3835	regulator
H9Q79_08670	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
H9Q79_08690	COG1597	lipid kinase activity
H9Q79_08695	COG0300	oxidoreductase activity
H9Q79_08700	COG0203	ribosomal protein L17
H9Q79_08705	COG0202	RNA polymerase activity
H9Q79_08715	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
H9Q79_08720	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
H9Q79_08725	COG0257	Belongs to the bacterial ribosomal protein bL36 family
H9Q79_08730	COG0534	Mate efflux family protein
H9Q79_08745	COG1882	Formate acetyltransferase
H9Q79_08750	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
H9Q79_08755	COG3192	ethanolamine utilization protein
H9Q79_08765	COG1979	alcohol dehydrogenase
H9Q79_08785	COG0697	spore germination
H9Q79_08795	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
H9Q79_08800	COG1882	Formate acetyltransferase
H9Q79_08805	COG3829	transcription factor binding
H9Q79_08810	COG1979	alcohol dehydrogenase
H9Q79_08820	COG0410	ABC transporter
H9Q79_08850	COG0674	pyruvate-flavodoxin oxidoreductase activity
H9Q79_08850	COG1013	pyruvate-flavodoxin oxidoreductase activity
H9Q79_08850	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
H9Q79_08850	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
H9Q79_08875	COG0583	DNA-binding transcription factor activity
H9Q79_08880	COG5598	trimethylamine methyltransferase
H9Q79_08885	COG1082	Xylose isomerase domain protein TIM barrel
H9Q79_08915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H9Q79_08925	COG0318	PFAM AMP-dependent synthetase and ligase
H9Q79_08930	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
H9Q79_08935	COG3290	protein histidine kinase activity
H9Q79_08935	COG3829	transcription factor binding
H9Q79_08965	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
H9Q79_08980	COG0563	adenylate kinase activity
H9Q79_08985	COG0201	protein transport
H9Q79_08990	COG0200	Binds to the 23S rRNA
H9Q79_08995	COG1841	ribosomal large subunit assembly
H9Q79_09000	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
H9Q79_09010	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
H9Q79_09015	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
H9Q79_09020	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
H9Q79_09040	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
H9Q79_09045	COG0255	Belongs to the universal ribosomal protein uL29 family
H9Q79_09050	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
H9Q79_09070	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
H9Q79_09085	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
H9Q79_09090	COG0051	transcription antitermination factor activity, RNA binding
H9Q79_09135	COG0305	Participates in initiation and elongation during chromosome replication
H9Q79_09140	COG0359	binds to the 23S rRNA
H9Q79_09145	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
H9Q79_09160	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
H9Q79_09165	COG4509	Sortase family
H9Q79_09175	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
H9Q79_09190	COG1827	regulation of RNA biosynthetic process
H9Q79_09205	COG1307	EDD domain protein, DegV family
H9Q79_09215	COG4708	membrane
H9Q79_09230	COG0446	pyridine nucleotide-disulphide oxidoreductase
H9Q79_09245	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
H9Q79_09390	COG0740	serine-type endopeptidase activity
H9Q79_09400	COG1802	Transcriptional regulator
H9Q79_09400	COG4626	Terminase
H9Q79_09460	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
H9Q79_09460	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
H9Q79_09505	COG1396	sequence-specific DNA binding
H9Q79_09580	COG3958	Transketolase
H9Q79_09585	COG3959	Transketolase, thiamine diphosphate binding domain
H9Q79_09595	COG1609	Transcriptional regulator
H9Q79_09600	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
H9Q79_09605	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
H9Q79_09610	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
H9Q79_09615	COG0205	6-phosphofructokinase activity
H9Q79_09640	COG3906	Belongs to the UPF0473 family
H9Q79_09645	COG3326	Membrane
H9Q79_09665	COG5002	protein histidine kinase activity
H9Q79_09670	COG0745	RESPONSE REGULATOR receiver
H9Q79_09685	COG3708	Transcriptional regulator
H9Q79_09685	COG2207	Transcriptional regulator
H9Q79_09690	COG0784	Response regulator, receiver
H9Q79_09690	COG2205	protein histidine kinase activity
H9Q79_09695	COG1129	ABC transporter
H9Q79_09700	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_09710	COG1869	D-ribose catabolic process
H9Q79_09715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
H9Q79_09725	COG1609	Transcriptional regulator
H9Q79_09765	COG0590	tRNA wobble adenosine to inosine editing
H9Q79_09780	COG0561	phosphatase activity
H9Q79_09800	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_09815	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_09820	COG1129	ABC transporter
H9Q79_09840	COG2972	Histidine kinase
H9Q79_09845	COG4753	response regulator
H9Q79_09845	COG2207	Transcriptional regulator
H9Q79_09855	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
H9Q79_09860	COG1022	Amp-dependent synthetase and ligase
H9Q79_09870	COG4191	Histidine kinase
H9Q79_09875	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
H9Q79_09880	COG1529	Aldehyde oxidase and xanthine dehydrogenase
H9Q79_09880	COG2080	2 iron, 2 sulfur cluster binding
H9Q79_09885	COG2080	2 iron, 2 sulfur cluster binding
H9Q79_09895	COG0352	thiamine-phosphate diphosphorylase activity
H9Q79_09905	COG2022	thiamine diphosphate biosynthetic process
H9Q79_09930	COG2239	Acts as a magnesium transporter
H9Q79_09935	COG2315	Protein conserved in bacteria
H9Q79_09940	COG0494	nUDIX hydrolase
H9Q79_09950	COG0789	Transcriptional regulator
H9Q79_09955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
H9Q79_09980	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
H9Q79_09980	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
H9Q79_10000	COG0366	Alpha amylase catalytic
H9Q79_10000	COG0366	Alpha amylase catalytic
H9Q79_10005	COG0058	SHG alpha-glucan phosphorylase activity
H9Q79_10020	COG5002	protein histidine kinase activity
H9Q79_10030	COG0704	Plays a role in the regulation of phosphate uptake
H9Q79_10035	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
H9Q79_10040	COG0581	inorganic phosphate transmembrane transporter activity
H9Q79_10045	COG0573	inorganic phosphate transmembrane transporter activity
H9Q79_10080	COG0456	acetyltransferase
H9Q79_10085	COG1214	PFAM Peptidase M22, glycoprotease
H9Q79_10090	COG0802	atpase or kinase
H9Q79_10095	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
H9Q79_10100	COG1739	Uncharacterized protein family UPF0029
H9Q79_10105	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
H9Q79_10115	COG0427	acetyl-CoA hydrolase
H9Q79_10125	COG1454	alcohol dehydrogenase
H9Q79_10130	COG0698	ribose 5-phosphate isomerase
H9Q79_10135	COG1082	Xylose isomerase domain protein TIM barrel
H9Q79_10140	COG1063	alcohol dehydrogenase
H9Q79_10145	COG1402	creatininase
H9Q79_10155	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_10160	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_10165	COG1129	ABC transporter
H9Q79_10170	COG1349	DNA-binding transcription factor activity
H9Q79_10175	COG1940	carbohydrate kinase activity
H9Q79_10180	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
H9Q79_10185	COG0322	excinuclease ABC activity
H9Q79_10190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
H9Q79_10230	COG3344	reverse transcriptase
H9Q79_10240	COG1136	(ABC) transporter
H9Q79_10255	COG0484	heat shock protein binding
H9Q79_10270	COG1191	sigma factor activity
H9Q79_10275	COG0004	ammonium transporteR
H9Q79_10280	COG1120	ATPase activity
H9Q79_10285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
H9Q79_10295	COG1191	sigma factor activity
H9Q79_10305	COG0710	3-dehydroquinate dehydratase activity
H9Q79_10310	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
H9Q79_10320	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
H9Q79_10325	COG2086	electron transfer activity
H9Q79_10330	COG1960	acyl-CoA dehydrogenase activity
H9Q79_10340	COG2390	Transcriptional regulator
H9Q79_10455	COG1132	(ABC) transporter
H9Q79_10460	COG1132	(ABC) transporter
H9Q79_10465	COG1309	transcriptional regulator
H9Q79_10470	COG0745	RESPONSE REGULATOR receiver
H9Q79_10485	COG1121	(ABC) transporter
H9Q79_10490	COG0803	Belongs to the bacterial solute-binding protein 9 family
H9Q79_10505	COG0745	RESPONSE REGULATOR receiver
H9Q79_10515	COG1129	ABC transporter
H9Q79_10530	COG1309	transcriptional regulator
H9Q79_10540	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
H9Q79_10545	COG3958	Transketolase
H9Q79_10550	COG3959	Transketolase, thiamine diphosphate binding domain
H9Q79_10560	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_10565	COG1129	ABC transporter
H9Q79_10575	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_10580	COG1609	Transcriptional regulator
H9Q79_10585	COG0733	neurotransmitter:sodium symporter activity
H9Q79_10590	COG0583	DNA-binding transcription factor activity
H9Q79_10620	COG1349	DNA-binding transcription factor activity
H9Q79_10650	COG4608	Belongs to the ABC transporter superfamily
H9Q79_10655	COG0444	Belongs to the ABC transporter superfamily
H9Q79_10660	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
H9Q79_10695	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
H9Q79_10700	COG0772	Belongs to the SEDS family
H9Q79_10705	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
H9Q79_10710	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
H9Q79_10715	COG0768	penicillin binding
H9Q79_10720	COG0768	penicillin binding
H9Q79_10730	COG0275	rRNA processing
H9Q79_10740	COG0012	GTP binding
H9Q79_10765	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
H9Q79_10780	COG0631	protein serine/threonine phosphatase activity
H9Q79_10785	COG0820	rRNA (adenine-C2-)-methyltransferase activity
H9Q79_10790	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
H9Q79_10790	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
H9Q79_10795	COG2738	Putative neutral zinc metallopeptidase
H9Q79_10805	COG0242	peptide deformylase activity
H9Q79_10810	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
H9Q79_10815	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
H9Q79_10840	COG0549	Belongs to the carbamate kinase family
H9Q79_10850	COG4974	Belongs to the 'phage' integrase family
H9Q79_10855	COG0423	glycine-tRNA ligase activity
H9Q79_10870	COG0165	Argininosuccinate lyase
H9Q79_10875	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
H9Q79_10885	COG0765	amino acid transport
H9Q79_10890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
H9Q79_10900	COG2723	6-phospho-beta-galactosidase activity
H9Q79_10925	COG1129	ABC transporter
H9Q79_10965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
H9Q79_10970	COG1522	sequence-specific DNA binding
H9Q79_10975	COG1307	EDD domain protein, DegV family
H9Q79_10985	COG2197	response regulator
H9Q79_10990	COG4585	Histidine kinase
H9Q79_10995	COG1131	(ABC) transporter
H9Q79_11020	COG1760	l-serine dehydratase
H9Q79_11025	COG4716	Myosin-crossreactive antigen
H9Q79_11035	COG1228	amidohydrolase
H9Q79_11055	COG2135	peptidase activity
H9Q79_11060	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
H9Q79_11090	COG1959	2 iron, 2 sulfur cluster binding
H9Q79_11105	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
H9Q79_11110	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
H9Q79_11120	COG1732	Glycine betaine
H9Q79_11125	COG1125	glycine betaine transport
H9Q79_11125	COG0517	IMP dehydrogenase activity
H9Q79_11130	COG1929	Belongs to the glycerate kinase type-1 family
H9Q79_11145	COG1215	transferase activity, transferring glycosyl groups
H9Q79_11190	COG3177	Filamentation induced by cAMP protein fic
H9Q79_11210	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_11215	COG1129	ABC transporter
H9Q79_11225	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_11245	COG1349	DNA-binding transcription factor activity
H9Q79_11255	COG0037	tRNA processing
H9Q79_11255	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
H9Q79_11260	COG0037	tRNA processing
H9Q79_11285	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
H9Q79_11290	COG0776	regulation of translation
H9Q79_11295	COG3956	TIGRFAM MazG family protein
H9Q79_11300	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
H9Q79_11320	COG0617	tRNA 3'-terminal CCA addition
H9Q79_11330	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
H9Q79_11345	COG0698	ribose 5-phosphate isomerase
H9Q79_11355	COG0009	L-threonylcarbamoyladenylate synthase
H9Q79_11385	COG1283	sodium-dependent phosphate transmembrane transporter activity
H9Q79_11390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
H9Q79_11395	COG1481	regulation of sporulation
H9Q79_11405	COG0812	UDP-N-acetylmuramate dehydrogenase activity
H9Q79_11465	COG1129	ABC transporter
H9Q79_11470	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_11475	COG3275	phosphorelay sensor kinase activity
H9Q79_11480	COG2204	response regulator
H9Q79_11485	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
H9Q79_11490	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
H9Q79_11495	COG0800	Aldolase
H9Q79_11505	COG2140	Oxalate decarboxylase
H9Q79_11515	COG0346	lactoylglutathione lyase activity
H9Q79_11520	COG0546	phosphoglycolate phosphatase activity
H9Q79_11525	COG2188	Transcriptional regulator
H9Q79_11530	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
H9Q79_11535	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
H9Q79_11540	COG1070	Carbohydrate kinase
H9Q79_11545	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_11550	COG1129	ABC transporter
H9Q79_11585	COG1070	Carbohydrate kinase
H9Q79_11590	COG1070	Carbohydrate kinase
H9Q79_11600	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_11605	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_11610	COG1129	ABC transporter
H9Q79_11615	COG1609	Transcriptional regulator
H9Q79_11620	COG4952	isomerase
H9Q79_11640	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
H9Q79_11660	COG4149	molybdate abc transporter
H9Q79_11665	COG0725	ABC transporter, periplasmic molybdate-binding protein
H9Q79_11670	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
H9Q79_11690	COG2814	Major facilitator Superfamily
H9Q79_11750	COG0285	dihydrofolate synthase activity
H9Q79_11760	COG0525	valine-tRNA ligase activity
H9Q79_11815	COG3843	relaxase mobilization nuclease domain protein
H9Q79_11835	COG0820	rRNA (adenine-C2-)-methyltransferase activity
H9Q79_11875	COG4443	Transcriptional Coactivator p15 (PC4)
H9Q79_11880	COG1475	DNA binding
H9Q79_11935	COG1609	Transcriptional regulator
H9Q79_11940	COG0577	efflux transmembrane transporter activity
H9Q79_11940	COG1136	(ABC) transporter
H9Q79_11945	COG1349	DNA-binding transcription factor activity
H9Q79_11955	COG1105	Belongs to the carbohydrate kinase PfkB family
H9Q79_11965	COG2033	superoxide reductase activity
H9Q79_11985	COG0246	Mannitol dehydrogenase
H9Q79_11990	COG1312	Catalyzes the dehydration of D-mannonate
H9Q79_11995	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
H9Q79_12005	COG0191	fructose-bisphosphate aldolase activity
H9Q79_12010	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_12015	COG1129	ABC transporter
H9Q79_12035	COG1063	alcohol dehydrogenase
H9Q79_12040	COG1349	DNA-binding transcription factor activity
H9Q79_12055	COG2188	Transcriptional regulator
H9Q79_12060	COG0698	ribose 5-phosphate isomerase
H9Q79_12070	COG0179	Fumarylacetoacetate (FAA) hydrolase
H9Q79_12075	COG0280	phosphate acetyltransferase
H9Q79_12080	COG3426	butyrate kinase activity
H9Q79_12085	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
H9Q79_12100	COG2086	electron transfer activity
H9Q79_12115	COG0673	inositol 2-dehydrogenase activity
H9Q79_12120	COG1082	Xylose isomerase domain protein TIM barrel
H9Q79_12130	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_12145	COG1063	alcohol dehydrogenase
H9Q79_12150	COG1609	Transcriptional regulator
H9Q79_12175	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_12180	COG1129	ABC transporter
H9Q79_12185	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
H9Q79_12190	COG3958	Transketolase
H9Q79_12195	COG3959	Transketolase, thiamine diphosphate binding domain
H9Q79_12225	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
H9Q79_12230	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
H9Q79_12235	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
H9Q79_12250	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
H9Q79_12265	COG3773	Cell wall hydrolase
H9Q79_12265	COG3409	Peptidoglycan-binding domain 1 protein
H9Q79_12275	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
H9Q79_12295	COG2996	Protein conserved in bacteria
H9Q79_12315	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
H9Q79_12320	COG1876	peptidase activity
H9Q79_12330	COG1850	ribulose-bisphosphate carboxylase activity
H9Q79_12340	COG0235	Class ii aldolase
H9Q79_12350	COG0698	ribose 5-phosphate isomerase
H9Q79_12365	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
H9Q79_12370	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_12375	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_12380	COG1129	ABC transporter
H9Q79_12385	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_12400	COG2801	Transposase and inactivated derivatives
H9Q79_12405	COG2002	toxin-antitoxin pair type II binding
H9Q79_12420	COG1757	Na H antiporter
H9Q79_12435	COG2211	Major facilitator Superfamily
H9Q79_12465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
H9Q79_12470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H9Q79_12475	COG1126	abc transporter atp-binding protein
H9Q79_12480	COG0765	amino acid transport
H9Q79_12485	COG0765	amino acid transport
H9Q79_12495	COG0436	Aminotransferase
H9Q79_12500	COG1414	Transcriptional regulator
H9Q79_12505	COG2508	Transcriptional regulator
H9Q79_12525	COG2217	Heavy metal translocating P-type atpase
H9Q79_12530	COG2205	protein histidine kinase activity
H9Q79_12530	COG0784	Response regulator, receiver
H9Q79_12545	COG0784	Response regulator, receiver
H9Q79_12545	COG2198	Histidine kinase
H9Q79_12545	COG2205	protein histidine kinase activity
H9Q79_12560	COG5001	Diguanylate cyclase
H9Q79_12560	COG4251	negative regulation of phosphorylation
H9Q79_12560	COG3706	GGDEF domain
H9Q79_12560	COG2203	Gaf domain
H9Q79_12575	COG2197	response regulator
H9Q79_12580	COG4585	Histidine kinase
H9Q79_12670	COG1410	methionine synthase
H9Q79_12670	COG0646	methionine synthase
H9Q79_12680	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
H9Q79_12695	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
H9Q79_12705	COG1131	(ABC) transporter
H9Q79_12710	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
H9Q79_12720	COG0523	cobalamin synthesis protein
H9Q79_12730	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
H9Q79_12755	COG1132	(ABC) transporter
H9Q79_12760	COG1418	mRNA catabolic process
H9Q79_12775	COG0220	tRNA (guanine-N7-)-methyltransferase activity
H9Q79_12790	COG1269	ATP hydrolysis coupled proton transport
H9Q79_12810	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
H9Q79_12820	COG1394	ATPase activity, coupled to movement of substances
H9Q79_12845	COG0646	methionine synthase
H9Q79_12845	COG1410	methionine synthase
H9Q79_12855	COG5012	cobalamin binding
H9Q79_12865	COG2508	Transcriptional regulator
H9Q79_12870	COG0426	domain, Protein
H9Q79_12875	COG1773	rubredoxin
H9Q79_12880	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
H9Q79_12890	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
H9Q79_12905	COG2378	regulation of single-species biofilm formation
H9Q79_12910	COG0456	acetyltransferase
H9Q79_12915	COG0700	Nucleoside recognition
H9Q79_12920	COG3875	lactate racemase activity
H9Q79_12925	COG0488	(ABC) transporter
H9Q79_12930	COG0583	DNA-binding transcription factor activity
H9Q79_12940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
H9Q79_12950	COG1120	ATPase activity
H9Q79_12955	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
H9Q79_12970	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
H9Q79_12975	COG4717	serine-type aminopeptidase activity
H9Q79_12980	COG0420	3'-5' exonuclease activity
H9Q79_12985	COG0017	Asparaginyl-tRNA synthetase
H9Q79_13025	COG0564	pseudouridine synthase activity
H9Q79_13035	COG2508	Transcriptional regulator
H9Q79_13065	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
H9Q79_13070	COG2508	Transcriptional regulator
H9Q79_13085	COG3842	ATPase activity
H9Q79_13090	COG5002	protein histidine kinase activity
H9Q79_13105	COG0166	Belongs to the GPI family
H9Q79_13115	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
H9Q79_13140	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
H9Q79_13150	COG0537	adenosine 5'-monophosphoramidase activity
H9Q79_13155	COG5002	protein histidine kinase activity
H9Q79_13160	COG0705	Rhomboid family
H9Q79_13165	COG1716	ATPase activity
H9Q79_13270	COG0714	Associated with various cellular activities
H9Q79_13305	COG4974	Belongs to the 'phage' integrase family
H9Q79_13320	COG0791	NLP P60 protein
H9Q79_13340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
H9Q79_13350	COG0583	DNA-binding transcription factor activity
H9Q79_13505	COG1192	Involved in chromosome partitioning
H9Q79_13555	COG1309	transcriptional regulator
H9Q79_13560	COG0084	hydrolase, TatD family'
H9Q79_13575	COG1592	Rubrerythrin
H9Q79_13575	COG1773	rubredoxin
H9Q79_13590	COG3938	Belongs to the proline racemase family
H9Q79_13595	COG3938	Belongs to the proline racemase family
H9Q79_13600	COG4086	secreted protein
H9Q79_13605	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
H9Q79_13615	COG0058	SHG alpha-glucan phosphorylase activity
H9Q79_13620	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
H9Q79_13660	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
H9Q79_13660	COG3266	domain, Protein
H9Q79_13660	COG4932	domain protein
H9Q79_13685	COG1459	type II secretion system
H9Q79_13750	COG0242	peptide deformylase activity
H9Q79_13790	COG0745	RESPONSE REGULATOR receiver
H9Q79_13795	COG5002	protein histidine kinase activity
H9Q79_13815	COG1475	DNA binding
H9Q79_13820	COG1192	Involved in chromosome partitioning
H9Q79_13825	COG1475	DNA binding
H9Q79_13840	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
H9Q79_13850	COG1475	DNA binding
H9Q79_13855	COG1192	Involved in chromosome partitioning
H9Q79_13885	COG1131	(ABC) transporter
H9Q79_13895	COG0357	Ribosomal RNA small subunit methyltransferase G
H9Q79_13900	COG0445	tRNA wobble uridine modification
H9Q79_13905	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
H9Q79_13910	COG1847	R3H domain protein
H9Q79_13920	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
H9Q79_13925	COG0594	ribonuclease P activity
H9Q79_13935	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
H9Q79_13940	COG0592	DNA-directed DNA polymerase activity
H9Q79_13945	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
H9Q79_13950	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
H9Q79_13955	COG0187	DNA topoisomerase II activity
H9Q79_13960	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
H9Q79_14045	COG1129	ABC transporter
H9Q79_14050	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14055	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_14070	COG1070	Carbohydrate kinase
H9Q79_14080	COG0235	Class ii aldolase
H9Q79_14085	COG1609	Transcriptional regulator
H9Q79_14100	COG0667	Aldo Keto reductase
H9Q79_14105	COG0583	DNA-binding transcription factor activity
H9Q79_14115	COG1686	Belongs to the peptidase S11 family
H9Q79_14125	COG1472	Belongs to the glycosyl hydrolase 3 family
H9Q79_14130	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
H9Q79_14135	COG0714	Associated with various cellular activities
H9Q79_14155	COG3645	SOS response
H9Q79_14165	COG1396	sequence-specific DNA binding
H9Q79_14305	COG3620	sequence-specific DNA binding
H9Q79_14310	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
H9Q79_14360	COG1598	PFAM Uncharacterised protein family UPF0150
H9Q79_14370	COG2385	sporulation resulting in formation of a cellular spore
H9Q79_14410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
H9Q79_14415	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
H9Q79_14420	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
H9Q79_14425	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
H9Q79_14435	COG3845	ABC transporter
H9Q79_14440	COG4603	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14445	COG1079	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14460	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
H9Q79_14470	COG0542	response to heat
H9Q79_14480	COG3829	transcription factor binding
H9Q79_14505	COG1012	belongs to the aldehyde dehydrogenase family
H9Q79_14510	COG1454	alcohol dehydrogenase
H9Q79_14520	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
H9Q79_14525	COG0583	DNA-binding transcription factor activity
H9Q79_14545	COG1129	ABC transporter
H9Q79_14550	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14560	COG4974	Belongs to the 'phage' integrase family
H9Q79_14570	COG1129	ABC transporter
H9Q79_14575	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14580	COG2801	Transposase and inactivated derivatives
H9Q79_14600	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_14610	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_14615	COG1129	ABC transporter
H9Q79_14620	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14625	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_14635	COG3959	Transketolase, thiamine diphosphate binding domain
H9Q79_14640	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
H9Q79_14655	COG0445	tRNA wobble uridine modification
H9Q79_14670	COG0395	ABC-type sugar transport system, permease component
H9Q79_14675	COG1175	transmembrane transport
H9Q79_14685	COG1609	Transcriptional regulator
H9Q79_14695	COG2223	nitrite transmembrane transporter activity
H9Q79_14705	COG1454	alcohol dehydrogenase
H9Q79_14715	COG1129	ABC transporter
H9Q79_14745	COG5002	protein histidine kinase activity
H9Q79_14750	COG0745	RESPONSE REGULATOR receiver
H9Q79_14770	COG0194	GDP metabolic process
H9Q79_14780	COG1774	PSP1 C-terminal conserved region
H9Q79_14785	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
H9Q79_14790	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
H9Q79_14795	COG2186	Transcriptional regulator
H9Q79_14800	COG4948	Mandelate Racemase Muconate Lactonizing
H9Q79_14805	COG1063	alcohol dehydrogenase
H9Q79_14810	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_14815	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
H9Q79_14820	COG1349	DNA-binding transcription factor activity
H9Q79_14830	COG1129	ABC transporter
H9Q79_14840	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14850	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
H9Q79_14875	COG2271	Major facilitator Superfamily
H9Q79_14885	COG2508	Transcriptional regulator
H9Q79_14915	COG2508	Transcriptional regulator
H9Q79_14920	COG1129	ABC transporter
H9Q79_14925	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_14930	COG4214	carbohydrate transport
H9Q79_14940	COG0673	inositol 2-dehydrogenase activity
H9Q79_14950	COG1454	alcohol dehydrogenase
H9Q79_14975	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H9Q79_14985	COG0523	cobalamin synthesis protein
H9Q79_14995	COG0523	cobalamin synthesis protein
H9Q79_15005	COG2715	membrane protein required for spore maturation
H9Q79_15020	COG1136	(ABC) transporter
H9Q79_15045	COG0653	protein targeting
H9Q79_15055	COG4492	Belongs to the UPF0735 family
H9Q79_15060	COG0460	homoserine dehydrogenase
H9Q79_15065	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
H9Q79_15070	COG5002	protein histidine kinase activity
H9Q79_15070	COG2198	Histidine kinase
H9Q79_15070	COG0784	Response regulator, receiver
H9Q79_15080	COG3706	GGDEF domain
H9Q79_15090	COG2188	Transcriptional regulator
H9Q79_15105	COG2183	response to ionizing radiation
H9Q79_15115	COG1309	transcriptional regulator
H9Q79_15120	COG1592	Rubrerythrin
H9Q79_15130	COG1051	belongs to the nudix hydrolase family
H9Q79_15160	COG0514	ATP-dependent DNA helicase (RecQ)
H9Q79_15170	COG0569	domain protein
H9Q79_15180	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
H9Q79_15190	COG0205	6-phosphofructokinase activity
H9Q79_15205	COG2199	diguanylate cyclase activity
H9Q79_15220	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
H9Q79_15235	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
H9Q79_15240	COG0183	Belongs to the thiolase family
H9Q79_15245	COG0697	spore germination
H9Q79_15250	COG2759	Belongs to the formate--tetrahydrofolate ligase family
H9Q79_15265	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
H9Q79_15270	COG1268	BioY protein
H9Q79_15285	COG3547	Transposase (IS116 IS110 IS902 family)
H9Q79_15295	COG2205	protein histidine kinase activity
H9Q79_15295	COG0784	Response regulator, receiver
H9Q79_15305	COG0071	Belongs to the small heat shock protein (HSP20) family
H9Q79_15310	COG0484	heat shock protein binding
H9Q79_15315	COG0542	response to heat
H9Q79_15340	COG0534	Mate efflux family protein
H9Q79_15345	COG2226	methyltransferase
H9Q79_15360	COG1283	sodium-dependent phosphate transmembrane transporter activity
H9Q79_15375	COG1247	-acetyltransferase
H9Q79_15385	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
H9Q79_15390	COG1074	ATP-dependent DNA helicase activity
H9Q79_15395	COG0698	ribose 5-phosphate isomerase
H9Q79_15410	COG1129	ABC transporter
H9Q79_15415	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_15420	COG1063	alcohol dehydrogenase
H9Q79_15425	COG2376	Dihydroxyacetone kinase
H9Q79_15435	COG4753	response regulator
H9Q79_15435	COG2207	Transcriptional regulator
H9Q79_15440	COG2972	Histidine kinase
H9Q79_15460	COG0534	Mate efflux family protein
H9Q79_15465	COG2205	protein histidine kinase activity
H9Q79_15495	COG0436	Aminotransferase
H9Q79_15500	COG3022	response to hydroperoxide
H9Q79_15505	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
H9Q79_15570	COG0629	single-stranded DNA binding
H9Q79_15690	COG3505	Type IV secretory pathway VirD4
H9Q79_15705	COG1132	(ABC) transporter
H9Q79_15710	COG1132	(ABC) transporter
H9Q79_15850	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_15855	COG1129	ABC transporter
H9Q79_15860	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_15865	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_15870	COG0789	Transcriptional regulator
H9Q79_15880	COG0789	Transcriptional regulator
H9Q79_15880	COG4978	Transcriptional regulator
H9Q79_15885	COG1132	(ABC) transporter
H9Q79_15910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H9Q79_15940	COG0267	Belongs to the bacterial ribosomal protein bL33 family
H9Q79_15950	COG0250	Participates in transcription elongation, termination and antitermination
H9Q79_15955	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
H9Q79_15960	COG0081	regulation of translation
H9Q79_15970	COG0222	ribosome binding
H9Q79_15975	COG4166	transmembrane transport
H9Q79_15980	COG0601	transmembrane transport
H9Q79_15985	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
H9Q79_15990	COG0444	Belongs to the ABC transporter superfamily
H9Q79_16000	COG0085	RNA polymerase activity
H9Q79_16005	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
H9Q79_16020	COG1971	Probably functions as a manganese efflux pump
H9Q79_16030	COG1217	gtp-binding protein TYPA
H9Q79_16040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H9Q79_16045	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
H9Q79_16050	COG1609	Transcriptional regulator
H9Q79_16060	COG1129	ABC transporter
H9Q79_16065	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_16070	COG1063	alcohol dehydrogenase
H9Q79_16075	COG1063	alcohol dehydrogenase
H9Q79_16090	COG1105	Belongs to the carbohydrate kinase PfkB family
H9Q79_16095	COG1940	carbohydrate kinase activity
H9Q79_16105	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
H9Q79_16125	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
H9Q79_16130	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
H9Q79_16135	COG2088	sporulation resulting in formation of a cellular spore
H9Q79_16140	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
H9Q79_16140	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
H9Q79_16155	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
H9Q79_16160	COG0049	tRNA binding
H9Q79_16165	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
H9Q79_16170	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
H9Q79_16190	COG3279	Response regulator of the LytR AlgR family
H9Q79_16245	COG3842	ATPase activity
H9Q79_16255	COG1175	transmembrane transport
H9Q79_16260	COG0395	ABC-type sugar transport system, permease component
H9Q79_16275	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
H9Q79_16310	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
H9Q79_16310	COG0116	Belongs to the methyltransferase superfamily
H9Q79_16315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
H9Q79_16325	COG1181	Belongs to the D-alanine--D-alanine ligase family
H9Q79_16330	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
H9Q79_16335	COG0300	oxidoreductase activity
H9Q79_16355	COG1342	Belongs to the UPF0251 family
H9Q79_16360	COG0583	DNA-binding transcription factor activity
H9Q79_16365	COG0446	pyridine nucleotide-disulphide oxidoreductase
H9Q79_16370	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
H9Q79_16385	COG0622	Phosphoesterase
H9Q79_16390	COG0116	Belongs to the methyltransferase superfamily
H9Q79_16395	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
H9Q79_16445	COG0254	rRNA binding
H9Q79_16450	COG3872	metal-dependent enzyme
H9Q79_16455	COG2890	protein-(glutamine-N5) methyltransferase activity
H9Q79_16460	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
H9Q79_16470	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
H9Q79_16480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
H9Q79_16485	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
H9Q79_16485	COG1328	CTP reductase activity
H9Q79_16490	COG2873	o-acetylhomoserine
H9Q79_16495	COG0006	proline dipeptidase activity
H9Q79_16500	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H9Q79_16510	COG2207	Transcriptional regulator
H9Q79_16520	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
H9Q79_16535	COG1917	Cupin 2, conserved barrel domain protein
H9Q79_16535	COG4977	sequence-specific DNA binding
H9Q79_16540	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
H9Q79_16545	COG0667	Aldo Keto reductase
H9Q79_16550	COG2186	Transcriptional regulator
H9Q79_16555	COG2423	ornithine cyclodeaminase activity
H9Q79_16595	COG0601	transmembrane transport
H9Q79_16600	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
H9Q79_16605	COG0444	Belongs to the ABC transporter superfamily
H9Q79_16610	COG4608	Belongs to the ABC transporter superfamily
H9Q79_16620	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H9Q79_16630	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
H9Q79_16640	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
H9Q79_16645	COG0697	spore germination
H9Q79_16650	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
H9Q79_16665	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_16685	COG0138	bifunctional purine biosynthesis protein purh
H9Q79_16695	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_16715	COG1937	Protein conserved in bacteria
H9Q79_16740	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
H9Q79_16755	COG2188	Transcriptional regulator
H9Q79_16765	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
H9Q79_16770	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
H9Q79_16785	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
H9Q79_16795	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
H9Q79_16800	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
H9Q79_16840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
H9Q79_16845	COG1120	ATPase activity
H9Q79_16860	COG1045	serine acetyltransferase
H9Q79_16905	COG2096	Adenosyltransferase
H9Q79_16940	COG0235	Class ii aldolase
H9Q79_16950	COG1063	alcohol dehydrogenase
H9Q79_16965	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
H9Q79_16975	COG4869	propanediol catabolic process
H9Q79_16980	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
H9Q79_16985	COG4656	Part of a membrane complex involved in electron transport
H9Q79_16995	COG1349	DNA-binding transcription factor activity
H9Q79_17010	COG1129	ABC transporter
H9Q79_17015	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_17020	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_17030	COG1869	D-ribose catabolic process
H9Q79_17040	COG1063	alcohol dehydrogenase
H9Q79_17045	COG1129	ABC transporter
H9Q79_17050	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_17060	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_17065	COG0191	fructose-bisphosphate aldolase activity
H9Q79_17075	COG2207	Transcriptional regulator
H9Q79_17085	COG1129	ABC transporter
H9Q79_17090	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_17115	COG1105	Belongs to the carbohydrate kinase PfkB family
H9Q79_17145	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
H9Q79_17150	COG4154	Belongs to the RbsD FucU family
H9Q79_17170	COG1609	Transcriptional regulator
H9Q79_17175	COG1070	Carbohydrate kinase
H9Q79_17180	COG1063	alcohol dehydrogenase
H9Q79_17190	COG0656	L-ascorbic acid biosynthetic process
H9Q79_17205	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
H9Q79_17210	COG0569	domain protein
H9Q79_17225	COG1725	Transcriptional regulator
H9Q79_17230	COG1131	(ABC) transporter
H9Q79_17240	COG0583	DNA-binding transcription factor activity
H9Q79_17245	COG0534	Mate efflux family protein
H9Q79_17310	COG4548	von Willebrand factor, type A
H9Q79_17320	COG2207	Transcriptional regulator
H9Q79_17320	COG4753	response regulator
H9Q79_17325	COG2972	Histidine kinase
H9Q79_17330	COG1129	ABC transporter
H9Q79_17335	COG0698	ribose 5-phosphate isomerase
H9Q79_17340	COG1129	ABC transporter
H9Q79_17345	COG1172	Belongs to the binding-protein-dependent transport system permease family
H9Q79_17350	COG1879	ABC-type sugar transport system periplasmic component
H9Q79_17360	COG1028	Short-chain dehydrogenase reductase Sdr
H9Q79_17365	COG2376	Dihydroxyacetone kinase
H9Q79_17390	COG3209	COG3209 Rhs family protein
H9Q79_17430	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
H9Q79_17435	COG1802	Transcriptional regulator
H9Q79_17440	COG0697	spore germination
H9Q79_17460	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
H9Q79_17480	COG1695	Transcriptional regulator
H9Q79_17500	COG4974	Belongs to the 'phage' integrase family
H9Q79_17530	COG4509	Sortase family
H9Q79_17545	COG0709	Synthesizes selenophosphate from selenide and ATP
H9Q79_17550	COG0425	Belongs to the sulfur carrier protein TusA family
H9Q79_17555	COG3608	succinylglutamate desuccinylase aspartoacylase
H9Q79_17555	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
H9Q79_17560	COG1104	cysteine desulfurase activity
H9Q79_17565	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
H9Q79_17585	COG2721	sulfolactate sulfo-lyase activity
H9Q79_17590	COG0246	Mannitol dehydrogenase
H9Q79_17595	COG1063	alcohol dehydrogenase
H9Q79_17640	COG1312	Catalyzes the dehydration of D-mannonate
H9Q79_17645	COG0246	Mannitol dehydrogenase
H9Q79_17660	COG1063	alcohol dehydrogenase
H9Q79_17670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
H9Q79_17695	COG0800	Aldolase
H9Q79_17700	COG1414	Transcriptional regulator
H9Q79_17705	COG1609	Transcriptional regulator
H9Q79_17710	COG0534	Mate efflux family protein
H9Q79_17755	COG2197	response regulator
H9Q79_17805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
H9Q79_17830	COG1671	Belongs to the UPF0178 family
H9Q79_17885	COG0519	Catalyzes the synthesis of GMP from XMP
H9Q79_17900	COG0582	viral genome integration into host DNA
H9Q79_17935	COG1151	hydroxylamine reductase activity
H9Q79_17980	COG1115	amino acid carrier protein
H9Q79_17990	COG1063	alcohol dehydrogenase
H9Q79_18010	COG2732	(Barnase) inhibitor
H9Q79_18015	COG3854	ATPases associated with a variety of cellular activities
H9Q79_18075	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
H9Q79_18080	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
H9Q79_18085	COG1302	Protein conserved in bacteria
H9Q79_18090	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
H9Q79_18095	COG1570	exodeoxyribonuclease VII activity
H9Q79_18100	COG1722	exodeoxyribonuclease VII activity
H9Q79_18110	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
H9Q79_18115	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
H9Q79_18120	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
H9Q79_18125	COG1438	arginine binding
H9Q79_18130	COG0497	DNA recombination
H9Q79_18135	COG0750	zinc metalloprotease
H9Q79_18140	COG1420	regulation of RNA biosynthetic process
H9Q79_18145	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
H9Q79_18150	COG0443	Heat shock 70 kDa protein
H9Q79_18155	COG0484	heat shock protein binding
H9Q79_18170	COG2264	protein methyltransferase activity
H9Q79_18175	COG1385	rRNA (uridine-N3-)-methyltransferase activity
H9Q79_18180	COG1104	cysteine desulfurase activity
H9Q79_18195	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H9Q79_18200	COG4472	Bacterial protein of unknown function (DUF965)
H9Q79_18215	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
H9Q79_18235	COG0826	peptidase U32