locus-tag class description H3N00_00015 PF01546 Peptidase family M20/M25/M40 H3N00_00020 PF13520 Amino acid permease H3N00_00035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H3N00_00040 PF01053 Cys/Met metabolism PLP-dependent enzyme H3N00_00060 PF14667 Polysaccharide biosynthesis C-terminal domain H3N00_00060 PF01943 Polysaccharide biosynthesis protein H3N00_00070 PF00534 Glycosyl transferases group 1 H3N00_00070 PF13439 Glycosyltransferase Family 4 H3N00_00075 PF09334 tRNA synthetases class I (M) H3N00_00075 PF00133 tRNA synthetases class I (I, L, M and V) H3N00_00075 PF08264 Anticodon-binding domain of tRNA H3N00_00075 PF13603 Leucyl-tRNA synthetase, Domain 2 H3N00_00080 PF01569 PAP2 superfamily H3N00_00090 PF01938 TRAM domain H3N00_00090 PF05958 tRNA (Uracil-5-)-methyltransferase H3N00_00105 PF03358 NADPH-dependent FMN reductase H3N00_00115 PF00232 Glycosyl hydrolase family 1 H3N00_00125 PF03009 Glycerophosphoryl diester phosphodiesterase family H3N00_00135 PF00438 S-adenosylmethionine synthetase, N-terminal domain H3N00_00135 PF02772 S-adenosylmethionine synthetase, central domain H3N00_00135 PF02773 S-adenosylmethionine synthetase, C-terminal domain H3N00_00145 PF00557 Metallopeptidase family M24 H3N00_00155 PF03816 Cell envelope-related transcriptional attenuator domain H3N00_00165 PF00512 His Kinase A (phospho-acceptor) domain H3N00_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_00170 PF00486 Transcriptional regulatory protein, C terminal H3N00_00170 PF00072 Response regulator receiver domain H3N00_00175 PF01625 Peptide methionine sulfoxide reductase H3N00_00190 PF12833 Helix-turn-helix domain H3N00_00190 PF17853 GGDEF-like domain H3N00_00195 PF01055 Glycosyl hydrolases family 31 H3N00_00195 PF13802 Galactose mutarotase-like H3N00_00210 PF01433 Peptidase family M1 domain H3N00_00210 PF11838 ERAP1-like C-terminal domain H3N00_00215 PF00324 Amino acid permease H3N00_00220 PF02574 Homocysteine S-methyltransferase H3N00_00225 PF00497 Bacterial extracellular solute-binding proteins, family 3 H3N00_00230 PF00004 ATPase family associated with various cellular activities (AAA) H3N00_00230 PF07724 AAA domain (Cdc48 subfamily) H3N00_00230 PF17871 AAA lid domain H3N00_00230 PF10431 C-terminal, D2-small domain, of ClpB protein H3N00_00235 PF11838 ERAP1-like C-terminal domain H3N00_00235 PF01433 Peptidase family M1 domain H3N00_00250 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_00255 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_00260 PF00005 ABC transporter H3N00_00260 PF17912 MalK OB fold domain H3N00_00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_00275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_00290 PF07859 alpha/beta hydrolase fold H3N00_00310 PF07690 Major Facilitator Superfamily H3N00_00335 PF01566 Natural resistance-associated macrophage protein H3N00_00405 PF00534 Glycosyl transferases group 1 H3N00_00435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H3N00_00435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H3N00_00440 PF00106 short chain dehydrogenase H3N00_00450 PF02652 L-lactate permease H3N00_00455 PF00248 Aldo/keto reductase family H3N00_00460 PF00156 Phosphoribosyl transferase domain H3N00_00465 PF00860 Permease family H3N00_00475 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_00475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_00480 PF13185 GAF domain H3N00_00495 PF00664 ABC transporter transmembrane region H3N00_00495 PF00005 ABC transporter H3N00_00500 PF00005 ABC transporter H3N00_00500 PF00664 ABC transporter transmembrane region H3N00_00505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H3N00_00510 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_00515 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_00520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_00520 PF00005 ABC transporter H3N00_00525 PF00005 ABC transporter H3N00_00525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_00530 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H3N00_00530 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H3N00_00535 PF10509 Galactokinase galactose-binding signature H3N00_00535 PF08544 GHMP kinases C terminal H3N00_00535 PF00288 GHMP kinases N terminal domain H3N00_00540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H3N00_00555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H3N00_00555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H3N00_00560 PF00155 Aminotransferase class I and II H3N00_00570 PF02378 Phosphotransferase system, EIIC H3N00_00575 PF00232 Glycosyl hydrolase family 1 H3N00_00580 PF00232 Glycosyl hydrolase family 1 H3N00_00585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H3N00_00590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H3N00_00595 PF01063 Amino-transferase class IV H3N00_00610 PF00535 Glycosyl transferase family 2 H3N00_00625 PF00579 tRNA synthetases class I (W and Y) H3N00_00625 PF01479 S4 domain H3N00_00680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H3N00_00680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H3N00_00685 PF01380 SIS domain H3N00_00685 PF01418 Helix-turn-helix domain, rpiR family H3N00_00695 PF00248 Aldo/keto reductase family H3N00_00700 PF04226 Transglycosylase associated protein H3N00_00765 PF00152 tRNA synthetases class II (D, K and N) H3N00_00765 PF01336 OB-fold nucleic acid binding domain H3N00_00770 PF01430 Hsp33 protein H3N00_00775 PF06480 FtsH Extracellular H3N00_00775 PF17862 AAA+ lid domain H3N00_00775 PF00004 ATPase family associated with various cellular activities (AAA) H3N00_00775 PF01434 Peptidase family M41 H3N00_00780 PF01171 PP-loop family H3N00_00780 PF00156 Phosphoribosyl transferase domain H3N00_00780 PF11734 TilS substrate C-terminal domain H3N00_00785 PF01171 PP-loop family H3N00_00795 PF01479 S4 domain H3N00_00800 PF14667 Polysaccharide biosynthesis C-terminal domain H3N00_00800 PF01943 Polysaccharide biosynthesis protein H3N00_00805 PF17757 UvrB interaction domain H3N00_00805 PF03461 TRCF domain H3N00_00805 PF02559 CarD-like/TRCF domain H3N00_00805 PF00270 DEAD/DEAH box helicase H3N00_00805 PF00271 Helicase conserved C-terminal domain H3N00_00810 PF01195 Peptidyl-tRNA hydrolase H3N00_00815 PF02903 Alpha amylase, N-terminal ig-like domain H3N00_00815 PF00128 Alpha amylase, catalytic domain H3N00_00820 PF00343 Carbohydrate phosphorylase H3N00_00825 PF08323 Starch synthase catalytic domain H3N00_00825 PF00534 Glycosyl transferases group 1 H3N00_00830 PF00483 Nucleotidyl transferase H3N00_00835 PF00132 Bacterial transferase hexapeptide (six repeats) H3N00_00835 PF00483 Nucleotidyl transferase H3N00_00840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H3N00_00840 PF02806 Alpha amylase, C-terminal all-beta domain H3N00_00840 PF00128 Alpha amylase, catalytic domain H3N00_00855 PF00440 Bacterial regulatory proteins, tetR family H3N00_00870 PF02378 Phosphotransferase system, EIIC H3N00_00875 PF07690 Major Facilitator Superfamily H3N00_00885 PF00248 Aldo/keto reductase family H3N00_00890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H3N00_00890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H3N00_00900 PF00480 ROK family H3N00_00910 PF04616 Glycosyl hydrolases family 43 H3N00_00910 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain H3N00_00915 PF00083 Sugar (and other) transporter H3N00_00935 PF03352 Methyladenine glycosylase H3N00_00940 PF02673 Bacitracin resistance protein BacA H3N00_00955 PF03551 Transcriptional regulator PadR-like family H3N00_00960 PF04024 PspC domain H3N00_00965 PF01773 Na+ dependent nucleoside transporter N-terminus H3N00_00965 PF07662 Na+ dependent nucleoside transporter C-terminus H3N00_00990 PF00149 Calcineurin-like phosphoesterase H3N00_00990 PF02872 5'-nucleotidase, C-terminal domain H3N00_00995 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_01000 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_01005 PF00005 ABC transporter H3N00_01020 PF02378 Phosphotransferase system, EIIC H3N00_01020 PF00367 phosphotransferase system, EIIB H3N00_01025 PF03816 Cell envelope-related transcriptional attenuator domain H3N00_01030 PF00303 Thymidylate synthase H3N00_01035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H3N00_01040 PF06257 Biofilm formation stimulator VEG H3N00_01045 PF01595 Cyclin M transmembrane N-terminal domain H3N00_01045 PF03471 Transporter associated domain H3N00_01045 PF00571 CBS domain H3N00_01050 PF03471 Transporter associated domain H3N00_01050 PF01595 Cyclin M transmembrane N-terminal domain H3N00_01050 PF00571 CBS domain H3N00_01055 PF00398 Ribosomal RNA adenine dimethylase H3N00_01060 PF13331 Domain of unknown function (DUF4093) H3N00_01065 PF01026 TatD related DNase H3N00_01070 PF00999 Sodium/hydrogen exchanger family H3N00_01075 PF01588 Putative tRNA binding domain H3N00_01075 PF08264 Anticodon-binding domain of tRNA H3N00_01075 PF09334 tRNA synthetases class I (M) H3N00_01135 PF02146 Sir2 family H3N00_01145 PF00368 Hydroxymethylglutaryl-coenzyme A reductase H3N00_01150 PF13411 MerR HTH family regulatory protein H3N00_01155 PF00884 Sulfatase H3N00_01160 PF13673 Acetyltransferase (GNAT) domain H3N00_01170 PF00521 DNA gyrase/topoisomerase IV, subunit A H3N00_01170 PF03989 DNA gyrase C-terminal domain, beta-propeller H3N00_01175 PF01751 Toprim domain H3N00_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_01175 PF00986 DNA gyrase B subunit, carboxyl terminus H3N00_01175 PF00204 DNA gyrase B H3N00_01180 PF02463 RecF/RecN/SMC N terminal domain H3N00_01190 PF02767 DNA polymerase III beta subunit, central domain H3N00_01190 PF02768 DNA polymerase III beta subunit, C-terminal domain H3N00_01190 PF00712 DNA polymerase III beta subunit, N-terminal domain H3N00_01195 PF00308 Bacterial dnaA protein H3N00_01195 PF08299 Bacterial dnaA protein helix-turn-helix H3N00_01195 PF11638 DnaA N-terminal domain H3N00_01200 PF00468 Ribosomal protein L34 H3N00_01205 PF00825 Ribonuclease P H3N00_01210 PF02096 60Kd inner membrane protein H3N00_01215 PF10502 Signal peptidase, peptidase S26 H3N00_01220 PF00005 ABC transporter H3N00_01225 PF01032 FecCD transport family H3N00_01230 PF01497 Periplasmic binding protein H3N00_01245 PF02254 TrkA-N domain H3N00_01245 PF02080 TrkA-C domain H3N00_01250 PF00324 Amino acid permease H3N00_01270 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_01270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_01280 PF13302 Acetyltransferase (GNAT) domain H3N00_01285 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_01285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_01295 PF02590 Predicted SPOUT methyltransferase H3N00_01300 PF02386 Cation transport protein H3N00_01305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H3N00_01310 PF00005 ABC transporter H3N00_01315 PF12704 MacB-like periplasmic core domain H3N00_01315 PF02687 FtsX-like permease family H3N00_01320 PF03176 MMPL family H3N00_01335 PF00075 RNase H H3N00_01355 PF05656 Protein of unknown function (DUF805) H3N00_01360 PF00860 Permease family H3N00_01370 PF00121 Triosephosphate isomerase H3N00_01395 PF07690 Major Facilitator Superfamily H3N00_01400 PF01161 Phosphatidylethanolamine-binding protein H3N00_01410 PF00857 Isochorismatase family H3N00_01415 PF13333 Integrase core domain H3N00_01415 PF00665 Integrase core domain H3N00_01415 PF13276 HTH-like domain H3N00_01425 PF01381 Helix-turn-helix H3N00_01435 PF13732 Domain of unknown function (DUF4162) H3N00_01435 PF00005 ABC transporter H3N00_01455 PF01380 SIS domain H3N00_01455 PF00571 CBS domain H3N00_01460 PF00232 Glycosyl hydrolase family 1 H3N00_01475 PF00480 ROK family H3N00_01490 PF13536 Putative multidrug resistance efflux transporter H3N00_01500 PF00072 Response regulator receiver domain H3N00_01500 PF12833 Helix-turn-helix domain H3N00_01515 PF02540 NAD synthase H3N00_01515 PF00117 Glutamine amidotransferase class-I H3N00_01515 PF00958 GMP synthase C terminal domain H3N00_01520 PF02608 ABC transporter substrate-binding protein PnrA-like H3N00_01525 PF00764 Arginosuccinate synthase H3N00_01530 PF14698 Argininosuccinate lyase C-terminal H3N00_01530 PF00206 Lyase H3N00_01535 PF02774 Semialdehyde dehydrogenase, dimerisation domain H3N00_01535 PF01118 Semialdehyde dehydrogenase, NAD binding domain H3N00_01540 PF01960 ArgJ family H3N00_01545 PF00696 Amino acid kinase family H3N00_01550 PF00202 Aminotransferase class-III H3N00_01555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H3N00_01555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H3N00_01560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H3N00_01560 PF00117 Glutamine amidotransferase class-I H3N00_01565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_01565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H3N00_01565 PF02142 MGS-like domain H3N00_01570 PF00905 Penicillin binding protein transpeptidase domain H3N00_01570 PF00912 Transglycosylase H3N00_01580 PF13520 Amino acid permease H3N00_01585 PF13732 Domain of unknown function (DUF4162) H3N00_01585 PF00005 ABC transporter H3N00_01595 PF13411 MerR HTH family regulatory protein H3N00_01605 PF03358 NADPH-dependent FMN reductase H3N00_01610 PF05958 tRNA (Uracil-5-)-methyltransferase H3N00_01610 PF01938 TRAM domain H3N00_01620 PF00892 EamA-like transporter family H3N00_01640 PF13344 Haloacid dehalogenase-like hydrolase H3N00_01640 PF00293 NUDIX domain H3N00_01645 PF01047 MarR family H3N00_01650 PF00664 ABC transporter transmembrane region H3N00_01650 PF00005 ABC transporter H3N00_01660 PF00248 Aldo/keto reductase family H3N00_01670 PF00005 ABC transporter H3N00_01675 PF03649 Uncharacterised protein family (UPF0014) H3N00_01685 PF00005 ABC transporter H3N00_01695 PF00005 ABC transporter H3N00_01700 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_01705 PF00497 Bacterial extracellular solute-binding proteins, family 3 H3N00_01710 PF00497 Bacterial extracellular solute-binding proteins, family 3 H3N00_01715 PF00708 Acylphosphatase H3N00_01725 PF03706 Lysylphosphatidylglycerol synthase TM region H3N00_01725 PF09924 Uncharacterised conserved protein (DUF2156) H3N00_01735 PF01594 AI-2E family transporter H3N00_01740 PF01638 HxlR-like helix-turn-helix H3N00_01755 PF02655 ATP-grasp domain H3N00_01755 PF18419 ATP-grasp-like domain H3N00_01755 PF04262 Glutamate-cysteine ligase H3N00_01765 PF00324 Amino acid permease H3N00_01790 PF01207 Dihydrouridine synthase (Dus) H3N00_01795 PF00583 Acetyltransferase (GNAT) family H3N00_01805 PF03601 Conserved hypothetical protein 698 H3N00_01815 PF03601 Conserved hypothetical protein 698 H3N00_01820 PF03466 LysR substrate binding domain H3N00_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H3N00_01825 PF01144 Coenzyme A transferase H3N00_01830 PF03060 Nitronate monooxygenase H3N00_01850 PF13520 Amino acid permease H3N00_01860 PF06146 Phosphate-starvation-inducible E H3N00_01870 PF11798 IMS family HHH motif H3N00_01870 PF11799 impB/mucB/samB family C-terminal domain H3N00_01870 PF00817 impB/mucB/samB family H3N00_01880 PF03853 YjeF-related protein N-terminus H3N00_01890 PF00230 Major intrinsic protein H3N00_01895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H3N00_01900 PF00561 alpha/beta hydrolase fold H3N00_01910 PF04608 Phosphatidylglycerophosphatase A H3N00_01915 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_01915 PF00107 Zinc-binding dehydrogenase H3N00_01925 PF07690 Major Facilitator Superfamily H3N00_01930 PF06800 Sugar transport protein H3N00_01940 PF13520 Amino acid permease H3N00_01945 PF00324 Amino acid permease H3N00_01950 PF13520 Amino acid permease H3N00_01955 PF00710 Asparaginase, N-terminal H3N00_01955 PF17763 Glutaminase/Asparaginase C-terminal domain H3N00_01960 PF02229 Transcriptional Coactivator p15 (PC4) H3N00_01970 PF01209 ubiE/COQ5 methyltransferase family H3N00_01975 PF00857 Isochorismatase family H3N00_01980 PF03061 Thioesterase superfamily H3N00_01985 PF00378 Enoyl-CoA hydratase/isomerase H3N00_01990 PF00501 AMP-binding enzyme H3N00_01990 PF13193 AMP-binding enzyme C-terminal domain H3N00_02005 PF00486 Transcriptional regulatory protein, C terminal H3N00_02005 PF00072 Response regulator receiver domain H3N00_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_02010 PF00512 His Kinase A (phospho-acceptor) domain H3N00_02050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H3N00_02055 PF00730 HhH-GPD superfamily base excision DNA repair protein H3N00_02055 PF14815 NUDIX domain H3N00_02060 PF01156 Inosine-uridine preferring nucleoside hydrolase H3N00_02065 PF02527 rRNA small subunit methyltransferase G H3N00_02070 PF13614 AAA domain H3N00_02075 PF17762 HTH domain found in ParB protein H3N00_02075 PF02195 ParB-like nuclease domain H3N00_02080 PF06107 Bacterial protein of unknown function (DUF951) H3N00_02085 PF01926 50S ribosome-binding GTPase H3N00_02085 PF06071 Protein of unknown function (DUF933) H3N00_02095 PF00486 Transcriptional regulatory protein, C terminal H3N00_02095 PF00072 Response regulator receiver domain H3N00_02100 PF00512 His Kinase A (phospho-acceptor) domain H3N00_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_02105 PF00768 D-alanyl-D-alanine carboxypeptidase H3N00_02105 PF07943 Penicillin-binding protein 5, C-terminal domain H3N00_02110 PF13276 HTH-like domain H3N00_02110 PF00665 Integrase core domain H3N00_02110 PF13333 Integrase core domain H3N00_02165 PF00854 POT family H3N00_02170 PF07690 Major Facilitator Superfamily H3N00_02175 PF06800 Sugar transport protein H3N00_02180 PF00480 ROK family H3N00_02185 PF00083 Sugar (and other) transporter H3N00_02220 PF10263 SprT-like family H3N00_02225 PF01757 Acyltransferase family H3N00_02230 PF01047 MarR family H3N00_02240 PF00005 ABC transporter H3N00_02245 PF00950 ABC 3 transport family H3N00_02250 PF13173 AAA domain H3N00_02250 PF13635 Domain of unknown function (DUF4143) H3N00_02255 PF12848 ABC transporter H3N00_02255 PF00005 ABC transporter H3N00_02260 PF01554 MatE H3N00_02270 PF00392 Bacterial regulatory proteins, gntR family H3N00_02275 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain H3N00_02275 PF04616 Glycosyl hydrolases family 43 H3N00_02280 PF01306 LacY proton/sugar symporter H3N00_02290 PF00596 Class II Aldolase and Adducin N-terminal domain H3N00_02295 PF02610 L-arabinose isomerase H3N00_02295 PF11762 L-arabinose isomerase C-terminal domain H3N00_02300 PF00248 Aldo/keto reductase family H3N00_02315 PF00083 Sugar (and other) transporter H3N00_02320 PF00005 ABC transporter H3N00_02325 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_02370 PF01270 Glycosyl hydrolases family 8 H3N00_02375 PF02350 UDP-N-acetylglucosamine 2-epimerase H3N00_02390 PF01966 HD domain H3N00_02395 PF07690 Major Facilitator Superfamily H3N00_02400 PF02397 Bacterial sugar transferase H3N00_02405 PF07702 UTRA domain H3N00_02405 PF00392 Bacterial regulatory proteins, gntR family H3N00_02410 PF09363 XFP C-terminal domain H3N00_02410 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase H3N00_02410 PF09364 XFP N-terminal domain H3N00_02420 PF00535 Glycosyl transferase family 2 H3N00_02445 PF04230 Polysaccharide pyruvyl transferase H3N00_02495 PF01431 Peptidase family M13 H3N00_02495 PF05649 Peptidase family M13 H3N00_02505 PF00171 Aldehyde dehydrogenase family H3N00_02505 PF00465 Iron-containing alcohol dehydrogenase H3N00_02515 PF13173 AAA domain H3N00_02515 PF13635 Domain of unknown function (DUF4143) H3N00_02520 PF03372 Endonuclease/Exonuclease/phosphatase family H3N00_02540 PF00300 Histidine phosphatase superfamily (branch 1) H3N00_02560 PF00005 ABC transporter H3N00_02560 PF00664 ABC transporter transmembrane region H3N00_02565 PF00664 ABC transporter transmembrane region H3N00_02565 PF00005 ABC transporter H3N00_02570 PF13635 Domain of unknown function (DUF4143) H3N00_02570 PF13173 AAA domain H3N00_02615 PF01238 Phosphomannose isomerase type I H3N00_02620 PF08353 Domain of unknown function (DUF1727) H3N00_02620 PF08245 Mur ligase middle domain H3N00_02625 PF07685 CobB/CobQ-like glutamine amidotransferase domain H3N00_02635 PF00265 Thymidine kinase H3N00_02640 PF03462 PCRF domain H3N00_02640 PF00472 RF-1 domain H3N00_02645 PF17827 PrmC N-terminal domain H3N00_02645 PF05175 Methyltransferase small domain H3N00_02650 PF03481 Putative GTP-binding controlling metal-binding H3N00_02650 PF01300 Telomere recombination H3N00_02655 PF00464 Serine hydroxymethyltransferase H3N00_02665 PF13460 NAD(P)H-binding H3N00_02665 PF11066 Protein of unknown function (DUF2867) H3N00_02675 PF00860 Permease family H3N00_02680 PF00119 ATP synthase A chain H3N00_02685 PF00137 ATP synthase subunit C H3N00_02690 PF00430 ATP synthase B/B' CF(0) H3N00_02695 PF00213 ATP synthase delta (OSCP) subunit H3N00_02700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H3N00_02700 PF00306 ATP synthase alpha/beta chain, C terminal domain H3N00_02700 PF02874 ATP synthase alpha/beta family, beta-barrel domain H3N00_02705 PF00231 ATP synthase H3N00_02710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H3N00_02710 PF02874 ATP synthase alpha/beta family, beta-barrel domain H3N00_02715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H3N00_02715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H3N00_02720 PF02557 D-alanyl-D-alanine carboxypeptidase H3N00_02725 PF01712 Deoxynucleoside kinase H3N00_02730 PF02403 Seryl-tRNA synthetase N-terminal domain H3N00_02730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H3N00_02755 PF17727 CtsR C-terminal dimerization domain H3N00_02755 PF05848 CtsR N-terminal HTH domain H3N00_02760 PF10431 C-terminal, D2-small domain, of ClpB protein H3N00_02760 PF02861 Clp amino terminal domain, pathogenicity island component H3N00_02760 PF17871 AAA lid domain H3N00_02760 PF07724 AAA domain (Cdc48 subfamily) H3N00_02760 PF00004 ATPase family associated with various cellular activities (AAA) H3N00_02765 PF04563 RNA polymerase beta subunit H3N00_02765 PF04561 RNA polymerase Rpb2, domain 2 H3N00_02765 PF10385 RNA polymerase beta subunit external 1 domain H3N00_02765 PF04565 RNA polymerase Rpb2, domain 3 H3N00_02765 PF04560 RNA polymerase Rpb2, domain 7 H3N00_02765 PF00562 RNA polymerase Rpb2, domain 6 H3N00_02770 PF04997 RNA polymerase Rpb1, domain 1 H3N00_02770 PF00623 RNA polymerase Rpb1, domain 2 H3N00_02770 PF04983 RNA polymerase Rpb1, domain 3 H3N00_02770 PF04998 RNA polymerase Rpb1, domain 5 H3N00_02770 PF05000 RNA polymerase Rpb1, domain 4 H3N00_02785 PF00465 Iron-containing alcohol dehydrogenase H3N00_02810 PF00440 Bacterial regulatory proteins, tetR family H3N00_02810 PF08359 YsiA-like protein, C-terminal region H3N00_02815 PF08241 Methyltransferase domain H3N00_02860 PF01381 Helix-turn-helix H3N00_02870 PF07690 Major Facilitator Superfamily H3N00_02875 PF03641 Possible lysine decarboxylase H3N00_02880 PF05175 Methyltransferase small domain H3N00_02885 PF14437 MafB19-like deaminase H3N00_02895 PF12169 DNA polymerase III subunits gamma and tau domain III H3N00_02900 PF02575 YbaB/EbfC DNA-binding family H3N00_02905 PF02132 RecR protein H3N00_02905 PF13662 Toprim domain H3N00_02920 PF02223 Thymidylate kinase H3N00_02925 PF06153 Cyclic-di-AMP receptor H3N00_02935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H3N00_02945 PF16363 GDP-mannose 4,6 dehydratase H3N00_02950 PF00814 Glycoprotease family H3N00_02955 PF00583 Acetyltransferase (GNAT) family H3N00_02965 PF00814 Glycoprotease family H3N00_02970 PF00348 Polyprenyl synthetase H3N00_02975 PF00338 Ribosomal protein S10p/S20e H3N00_02980 PF00297 Ribosomal protein L3 H3N00_02985 PF00573 Ribosomal protein L4/L1 family H3N00_02990 PF00276 Ribosomal protein L23 H3N00_02995 PF00181 Ribosomal Proteins L2, RNA binding domain H3N00_02995 PF03947 Ribosomal Proteins L2, C-terminal domain H3N00_03000 PF00203 Ribosomal protein S19 H3N00_03005 PF00237 Ribosomal protein L22p/L17e H3N00_03010 PF00189 Ribosomal protein S3, C-terminal domain H3N00_03010 PF07650 KH domain H3N00_03015 PF00252 Ribosomal protein L16p/L10e H3N00_03020 PF00831 Ribosomal L29 protein H3N00_03025 PF00366 Ribosomal protein S17 H3N00_03030 PF00238 Ribosomal protein L14p/L23e H3N00_03035 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H3N00_03035 PF00467 KOW motif H3N00_03040 PF00673 ribosomal L5P family C-terminus H3N00_03040 PF00281 Ribosomal protein L5 H3N00_03045 PF00410 Ribosomal protein S8 H3N00_03050 PF00347 Ribosomal protein L6 H3N00_03055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H3N00_03060 PF03719 Ribosomal protein S5, C-terminal domain H3N00_03060 PF00333 Ribosomal protein S5, N-terminal domain H3N00_03065 PF00327 Ribosomal protein L30p/L7e H3N00_03070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H3N00_03075 PF00344 SecY translocase H3N00_03080 PF05191 Adenylate kinase, active site lid H3N00_03085 PF01176 Translation initiation factor 1A / IF-1 H3N00_03090 PF00444 Ribosomal protein L36 H3N00_03095 PF00416 Ribosomal protein S13/S18 H3N00_03100 PF00411 Ribosomal protein S11 H3N00_03105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H3N00_03105 PF01000 RNA polymerase Rpb3/RpoA insert domain H3N00_03105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H3N00_03110 PF01196 Ribosomal protein L17 H3N00_03130 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_03135 PF09383 NIL domain H3N00_03135 PF00005 ABC transporter H3N00_03140 PF03180 NLPA lipoprotein H3N00_03150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H3N00_03150 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain H3N00_03150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H3N00_03155 PF02540 NAD synthase H3N00_03160 PF03358 NADPH-dependent FMN reductase H3N00_03160 PF00890 FAD binding domain H3N00_03160 PF04205 FMN-binding domain H3N00_03165 PF02424 ApbE family H3N00_03175 PF03466 LysR substrate binding domain H3N00_03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H3N00_03180 PF10415 Fumarase C C-terminus H3N00_03180 PF00206 Lyase H3N00_03185 PF14537 Cytochrome c3 H3N00_03185 PF00890 FAD binding domain H3N00_03190 PF00939 Sodium:sulfate symporter transmembrane region H3N00_03195 PF00056 lactate/malate dehydrogenase, NAD binding domain H3N00_03195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H3N00_03200 PF00682 HMGL-like H3N00_03200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_03200 PF00364 Biotin-requiring enzyme H3N00_03200 PF00289 Biotin carboxylase, N-terminal domain H3N00_03200 PF02785 Biotin carboxylase C-terminal domain H3N00_03200 PF02436 Conserved carboxylase domain H3N00_03205 PF09190 DALR domain H3N00_03205 PF01406 tRNA synthetases class I (C) catalytic domain H3N00_03210 PF01053 Cys/Met metabolism PLP-dependent enzyme H3N00_03215 PF01717 Cobalamin-independent synthase, Catalytic domain H3N00_03220 PF03180 NLPA lipoprotein H3N00_03225 PF02664 S-Ribosylhomocysteinase (LuxS) H3N00_03230 PF00636 Ribonuclease III domain H3N00_03235 PF08032 RNA 2'-O ribose methyltransferase substrate binding H3N00_03235 PF00588 SpoU rRNA Methylase family H3N00_03245 PF00471 Ribosomal protein L33 H3N00_03250 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H3N00_03255 PF02357 Transcription termination factor nusG H3N00_03255 PF00467 KOW motif H3N00_03260 PF00298 Ribosomal protein L11, RNA binding domain H3N00_03260 PF03946 Ribosomal protein L11, N-terminal domain H3N00_03265 PF00687 Ribosomal protein L1p/L10e family H3N00_03270 PF00466 Ribosomal protein L10 H3N00_03275 PF16320 Ribosomal protein L7/L12 dimerisation domain H3N00_03275 PF00542 Ribosomal protein L7/L12 C-terminal domain H3N00_03295 PF13333 Integrase core domain H3N00_03295 PF00665 Integrase core domain H3N00_03295 PF13276 HTH-like domain H3N00_03300 PF00005 ABC transporter H3N00_03305 PF00950 ABC 3 transport family H3N00_03310 PF01297 Zinc-uptake complex component A periplasmic H3N00_03315 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_03325 PF00005 ABC transporter H3N00_03330 PF00005 ABC transporter H3N00_03335 PF02361 Cobalt transport protein H3N00_03340 PF01416 tRNA pseudouridine synthase H3N00_03345 PF00572 Ribosomal protein L13 H3N00_03350 PF00380 Ribosomal protein S9/S16 H3N00_03365 PF00144 Beta-lactamase H3N00_03370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H3N00_03370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H3N00_03370 PF00205 Thiamine pyrophosphate enzyme, central domain H3N00_03385 PF03167 Uracil DNA glycosylase superfamily H3N00_03395 PF00248 Aldo/keto reductase family H3N00_03400 PF00128 Alpha amylase, catalytic domain H3N00_03410 PF01569 PAP2 superfamily H3N00_03430 PF07690 Major Facilitator Superfamily H3N00_03435 PF17760 UvrA interaction domain H3N00_03435 PF17755 UvrA DNA-binding domain H3N00_03435 PF00005 ABC transporter H3N00_03445 PF03668 P-loop ATPase protein family H3N00_03450 PF01933 Uncharacterised protein family UPF0052 H3N00_03455 PF10298 WhiA N-terminal LAGLIDADG-like domain H3N00_03455 PF14527 WhiA LAGLIDADG-like domain H3N00_03455 PF02650 WhiA C-terminal HTH domain H3N00_03460 PF00574 Clp protease H3N00_03465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H3N00_03465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H3N00_03475 PF02378 Phosphotransferase system, EIIC H3N00_03475 PF00367 phosphotransferase system, EIIB H3N00_03480 PF01783 Ribosomal L32p protein family H3N00_03485 PF01566 Natural resistance-associated macrophage protein H3N00_03505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H3N00_03505 PF00056 lactate/malate dehydrogenase, NAD binding domain H3N00_03510 PF00205 Thiamine pyrophosphate enzyme, central domain H3N00_03510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H3N00_03510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H3N00_03515 PF03306 Alpha-acetolactate decarboxylase H3N00_03520 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_03520 PF00107 Zinc-binding dehydrogenase H3N00_03525 PF05257 CHAP domain H3N00_03525 PF01476 LysM domain H3N00_03530 PF00877 NlpC/P60 family H3N00_03540 PF00692 dUTPase H3N00_03545 PF18073 Rubredoxin metal binding domain H3N00_03555 PF00749 tRNA synthetases class I (E and Q), catalytic domain H3N00_03560 PF07516 SecA Wing and Scaffold domain H3N00_03560 PF07517 SecA DEAD-like domain H3N00_03560 PF01043 SecA preprotein cross-linking domain H3N00_03565 PF00472 RF-1 domain H3N00_03565 PF03462 PCRF domain H3N00_03575 PF02388 FemAB family H3N00_03580 PF00588 SpoU rRNA Methylase family H3N00_03580 PF08032 RNA 2'-O ribose methyltransferase substrate binding H3N00_03590 PF01638 HxlR-like helix-turn-helix H3N00_03595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H3N00_03595 PF01409 tRNA synthetases class II core domain (F) H3N00_03600 PF01588 Putative tRNA binding domain H3N00_03600 PF03483 B3/4 domain H3N00_03600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H3N00_03600 PF03147 Ferredoxin-fold anticodon binding domain H3N00_03600 PF03484 tRNA synthetase B5 domain H3N00_03605 PF02618 YceG-like family H3N00_03610 PF00271 Helicase conserved C-terminal domain H3N00_03610 PF16124 RecQ zinc-binding H3N00_03610 PF00570 HRDC domain H3N00_03610 PF09382 RQC domain H3N00_03610 PF00270 DEAD/DEAH box helicase H3N00_03615 PF03449 Transcription elongation factor, N-terminal H3N00_03615 PF01272 Transcription elongation factor, GreA/GreB, C-term H3N00_03625 PF00905 Penicillin binding protein transpeptidase domain H3N00_03625 PF03717 Penicillin-binding Protein dimerisation domain H3N00_03630 PF01812 5-formyltetrahydrofolate cyclo-ligase family H3N00_03645 PF00480 ROK family H3N00_03660 PF05257 CHAP domain H3N00_03680 PF03009 Glycerophosphoryl diester phosphodiesterase family H3N00_03695 PF13411 MerR HTH family regulatory protein H3N00_03700 PF00120 Glutamine synthetase, catalytic domain H3N00_03700 PF03951 Glutamine synthetase, beta-Grasp domain H3N00_03725 PF00829 Ribosomal prokaryotic L21 protein H3N00_03730 PF01016 Ribosomal L27 protein H3N00_03735 PF00933 Glycosyl hydrolase family 3 N terminal domain H3N00_03735 PF14310 Fibronectin type III-like domain H3N00_03735 PF01915 Glycosyl hydrolase family 3 C-terminal domain H3N00_03735 PF07691 PA14 domain H3N00_03765 PF00881 Nitroreductase family H3N00_03770 PF00425 chorismate binding enzyme H3N00_03775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H3N00_03775 PF16582 Middle domain of thiamine pyrophosphate H3N00_03775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H3N00_03780 PF00561 alpha/beta hydrolase fold H3N00_03785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H3N00_03785 PF13378 Enolase C-terminal domain-like H3N00_03800 PF01321 Creatinase/Prolidase N-terminal domain H3N00_03800 PF00557 Metallopeptidase family M24 H3N00_03815 PF02872 5'-nucleotidase, C-terminal domain H3N00_03820 PF06265 Protein of unknown function (DUF1027) H3N00_03825 PF13344 Haloacid dehalogenase-like hydrolase H3N00_03830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H3N00_03835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H3N00_03835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H3N00_03840 PF01156 Inosine-uridine preferring nucleoside hydrolase H3N00_03865 PF12849 PBP superfamily domain H3N00_03870 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_03875 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_03880 PF00005 ABC transporter H3N00_03885 PF00005 ABC transporter H3N00_03890 PF01895 PhoU domain H3N00_03895 PF02631 RecX family H3N00_03915 PF04167 Protein of unknown function (DUF402) H3N00_03925 PF16658 Class II release factor RF3, C-terminal domain H3N00_03925 PF03144 Elongation factor Tu domain 2 H3N00_03925 PF00009 Elongation factor Tu GTP binding domain H3N00_03935 PF07997 Protein of unknown function (DUF1694) H3N00_03945 PF12002 MgsA AAA+ ATPase C terminal H3N00_03945 PF16193 AAA C-terminal domain H3N00_03945 PF05496 Holliday junction DNA helicase RuvB P-loop domain H3N00_03955 PF00582 Universal stress protein family H3N00_04065 PF03006 Haemolysin-III related H3N00_04095 PF00133 tRNA synthetases class I (I, L, M and V) H3N00_04095 PF08264 Anticodon-binding domain of tRNA H3N00_04095 PF10458 Valyl tRNA synthetase tRNA binding arm H3N00_04105 PF08245 Mur ligase middle domain H3N00_04105 PF02875 Mur ligase family, glutamate ligase domain H3N00_04120 PF00534 Glycosyl transferases group 1 H3N00_04120 PF13439 Glycosyltransferase Family 4 H3N00_04135 PF12848 ABC transporter H3N00_04135 PF16326 ABC transporter C-terminal domain H3N00_04135 PF00005 ABC transporter H3N00_04140 PF00166 Chaperonin 10 Kd subunit H3N00_04145 PF00118 TCP-1/cpn60 chaperonin family H3N00_04150 PF13520 Amino acid permease H3N00_04160 PF01820 D-ala D-ala ligase N-terminus H3N00_04160 PF07478 D-ala D-ala ligase C-terminus H3N00_04170 PF01926 50S ribosome-binding GTPase H3N00_04180 PF01467 Cytidylyltransferase-like H3N00_04185 PF01966 HD domain H3N00_04195 PF13649 Methyltransferase domain H3N00_04200 PF05636 HIGH Nucleotidyl Transferase H3N00_04210 PF01624 MutS domain I H3N00_04210 PF05192 MutS domain III H3N00_04210 PF05190 MutS family domain IV H3N00_04210 PF05188 MutS domain II H3N00_04210 PF00488 MutS domain V H3N00_04215 PF08676 MutL C terminal dimerisation domain H3N00_04215 PF01119 DNA mismatch repair protein, C-terminal domain H3N00_04315 PF02824 TGS domain H3N00_04315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H3N00_04315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H3N00_04315 PF03129 Anticodon binding domain H3N00_04320 PF04203 Sortase domain H3N00_04325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H3N00_04330 PF00216 Bacterial DNA-binding protein H3N00_04340 PF02687 FtsX-like permease family H3N00_04340 PF12704 MacB-like periplasmic core domain H3N00_04345 PF00005 ABC transporter H3N00_04360 PF07155 ECF-type riboflavin transporter, S component H3N00_04365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H3N00_04365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H3N00_04370 PF13742 OB-fold nucleic acid binding domain H3N00_04370 PF02601 Exonuclease VII, large subunit H3N00_04375 PF02609 Exonuclease VII small subunit H3N00_04380 PF00348 Polyprenyl synthetase H3N00_04385 PF01479 S4 domain H3N00_04385 PF01728 FtsJ-like methyltransferase H3N00_04390 PF01316 Arginine repressor, DNA binding domain H3N00_04390 PF02863 Arginine repressor, C-terminal domain H3N00_04395 PF13476 AAA domain H3N00_04405 PF00625 Guanylate kinase H3N00_04410 PF01192 RNA polymerase Rpb6 H3N00_04415 PF09335 SNARE associated Golgi protein H3N00_04420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H3N00_04425 PF00575 S1 RNA binding domain H3N00_04535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H3N00_04540 PF12822 ECF transporter, substrate-specific component H3N00_04545 PF01654 Cytochrome bd terminal oxidase subunit I H3N00_04550 PF02322 Cytochrome bd terminal oxidase subunit II H3N00_04555 PF00005 ABC transporter H3N00_04555 PF00664 ABC transporter transmembrane region H3N00_04560 PF00664 ABC transporter transmembrane region H3N00_04560 PF00005 ABC transporter H3N00_04565 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H3N00_04565 PF01476 LysM domain H3N00_04570 PF02222 ATP-grasp domain H3N00_04585 PF00313 'Cold-shock' DNA-binding domain H3N00_04590 PF00293 NUDIX domain H3N00_04600 PF01048 Phosphorylase superfamily H3N00_04605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H3N00_04610 PF01738 Dienelactone hydrolase family H3N00_04645 PF07972 NrdI Flavodoxin like H3N00_04650 PF00462 Glutaredoxin H3N00_04655 PF00317 Ribonucleotide reductase, all-alpha domain H3N00_04655 PF02867 Ribonucleotide reductase, barrel domain H3N00_04655 PF08343 Ribonucleotide reductase N-terminal H3N00_04660 PF00268 Ribonucleotide reductase, small chain H3N00_04670 PF02653 Branched-chain amino acid transport system / permease component H3N00_04675 PF00005 ABC transporter H3N00_04680 PF00654 Voltage gated chloride channel H3N00_04685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H3N00_04690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H3N00_04695 PF02645 Uncharacterised protein, DegV family COG1307 H3N00_04700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H3N00_04700 PF02378 Phosphotransferase system, EIIC H3N00_04700 PF00367 phosphotransferase system, EIIB H3N00_04715 PF04002 RadC-like JAB domain H3N00_04725 PF04085 rod shape-determining protein MreC H3N00_04730 PF00194 Eukaryotic-type carbonic anhydrase H3N00_04740 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_04745 PF00005 ABC transporter H3N00_04755 PF00925 GTP cyclohydrolase II H3N00_04755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H3N00_04760 PF00731 AIR carboxylase H3N00_04765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H3N00_04765 PF02222 ATP-grasp domain H3N00_04770 PF01259 SAICAR synthetase H3N00_04775 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase H3N00_04785 PF00586 AIR synthase related protein, N-terminal domain H3N00_04785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H3N00_04785 PF02769 AIR synthase related protein, C-terminal domain H3N00_04790 PF13537 Glutamine amidotransferase domain H3N00_04790 PF00156 Phosphoribosyl transferase domain H3N00_04795 PF00586 AIR synthase related protein, N-terminal domain H3N00_04795 PF02769 AIR synthase related protein, C-terminal domain H3N00_04800 PF00551 Formyl transferase H3N00_04805 PF02142 MGS-like domain H3N00_04805 PF01808 AICARFT/IMPCHase bienzyme H3N00_04810 PF02843 Phosphoribosylglycinamide synthetase, C domain H3N00_04810 PF02844 Phosphoribosylglycinamide synthetase, N domain H3N00_04810 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H3N00_04815 PF01268 Formate--tetrahydrofolate ligase H3N00_04835 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_04835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_04855 PF00324 Amino acid permease H3N00_04860 PF00224 Pyruvate kinase, barrel domain H3N00_04860 PF02887 Pyruvate kinase, alpha/beta domain H3N00_04860 PF00391 PEP-utilising enzyme, mobile domain H3N00_04870 PF04452 RNA methyltransferase H3N00_04880 PF02381 MraZ protein, putative antitoxin-like H3N00_04885 PF01795 MraW methylase family H3N00_04890 PF04977 Septum formation initiator H3N00_04900 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H3N00_04900 PF00953 Glycosyl transferase family 4 H3N00_04905 PF02875 Mur ligase family, glutamate ligase domain H3N00_04905 PF08245 Mur ligase middle domain H3N00_04910 PF04101 Glycosyltransferase family 28 C-terminal domain H3N00_04910 PF03033 Glycosyltransferase family 28 N-terminal domain H3N00_04915 PF08478 POTRA domain, FtsQ-type H3N00_04915 PF03799 Cell division protein FtsQ H3N00_04920 PF02491 SHS2 domain inserted in FTSA H3N00_04920 PF11983 Membrane-attachment and polymerisation-promoting switch H3N00_04925 PF12327 FtsZ family, C-terminal domain H3N00_04925 PF00091 Tubulin/FtsZ family, GTPase domain H3N00_04930 PF04472 Cell division protein SepF H3N00_04945 PF05103 DivIVA protein H3N00_04950 PF00133 tRNA synthetases class I (I, L, M and V) H3N00_04950 PF06827 Zinc finger found in FPG and IleRS H3N00_04950 PF08264 Anticodon-binding domain of tRNA H3N00_04965 PF13538 UvrD-like helicase C-terminal domain H3N00_04965 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain H3N00_04965 PF14490 Helix-hairpin-helix containing domain H3N00_04970 PF01709 Transcriptional regulator H3N00_04975 PF00860 Permease family H3N00_04980 PF00437 Type II/IV secretion system protein H3N00_04990 PF08334 Type II secretion system (T2SS), protein G H3N00_04990 PF07963 Prokaryotic N-terminal methylation motif H3N00_05020 PF00871 Acetokinase family H3N00_05025 PF17764 3′ DNA-binding domain (3′BD) H3N00_05025 PF00271 Helicase conserved C-terminal domain H3N00_05025 PF04851 Type III restriction enzyme, res subunit H3N00_05025 PF18074 Primosomal protein N C-terminal domain H3N00_05025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H3N00_05030 PF00551 Formyl transferase H3N00_05030 PF02911 Formyl transferase, C-terminal domain H3N00_05035 PF01189 16S rRNA methyltransferase RsmB/F H3N00_05035 PF01029 NusB family H3N00_05045 PF00069 Protein kinase domain H3N00_05045 PF03793 PASTA domain H3N00_05050 PF16745 RsgA N-terminal domain H3N00_05050 PF03193 RsgA GTPase H3N00_05055 PF00834 Ribulose-phosphate 3 epimerase family H3N00_05065 PF00830 Ribosomal L28 family H3N00_05070 PF03780 Asp23 family, cell envelope-related function H3N00_05075 PF13684 Dihydroxyacetone kinase family H3N00_05075 PF02734 DAK2 domain H3N00_05085 PF13439 Glycosyltransferase Family 4 H3N00_05095 PF00271 Helicase conserved C-terminal domain H3N00_05095 PF00270 DEAD/DEAH box helicase H3N00_05095 PF17191 RecG wedge domain H3N00_05100 PF02504 Fatty acid synthesis protein H3N00_05105 PF00550 Phosphopantetheine attachment site H3N00_05110 PF14622 Ribonuclease-III-like H3N00_05110 PF00035 Double-stranded RNA binding motif H3N00_05115 PF06470 SMC proteins Flexible Hinge Domain H3N00_05115 PF02463 RecF/RecN/SMC N terminal domain H3N00_05120 PF00448 SRP54-type protein, GTPase domain H3N00_05120 PF02881 SRP54-type protein, helical bundle domain H3N00_05125 PF04297 Putative helix-turn-helix protein, YlxM / p13 like H3N00_05130 PF02881 SRP54-type protein, helical bundle domain H3N00_05130 PF02978 Signal peptide binding domain H3N00_05130 PF00448 SRP54-type protein, GTPase domain H3N00_05150 PF00886 Ribosomal protein S16 H3N00_05155 PF00589 Phage integrase family H3N00_05155 PF14659 Phage integrase, N-terminal SAM-like domain H3N00_05255 PF03741 Integral membrane protein TerC family H3N00_05265 PF00300 Histidine phosphatase superfamily (branch 1) H3N00_05270 PF05239 PRC-barrel domain H3N00_05270 PF01782 RimM N-terminal domain H3N00_05275 PF01746 tRNA (Guanine-1)-methyltransferase H3N00_05280 PF01245 Ribosomal protein L19 H3N00_05285 PF00375 Sodium:dicarboxylate symporter family H3N00_05290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H3N00_05290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H3N00_05295 PF01361 Tautomerase enzyme H3N00_05300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H3N00_05300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H3N00_05305 PF00877 NlpC/P60 family H3N00_05310 PF01712 Deoxynucleoside kinase H3N00_05315 PF01741 Large-conductance mechanosensitive channel, MscL H3N00_05385 PF05816 Toxic anion resistance protein (TelA) H3N00_05390 PF03960 ArsC family H3N00_05395 PF05389 Negative regulator of genetic competence (MecA) H3N00_05400 PF00232 Glycosyl hydrolase family 1 H3N00_05405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H3N00_05410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H3N00_05415 PF00232 Glycosyl hydrolase family 1 H3N00_05420 PF02378 Phosphotransferase system, EIIC H3N00_05430 PF08439 Oligopeptidase F H3N00_05430 PF01432 Peptidase family M3 H3N00_05435 PF00230 Major intrinsic protein H3N00_05450 PF00356 Bacterial regulatory proteins, lacI family H3N00_05455 PF01321 Creatinase/Prolidase N-terminal domain H3N00_05455 PF00557 Metallopeptidase family M24 H3N00_05530 PF04127 DNA / pantothenate metabolism flavoprotein H3N00_05530 PF02441 Flavoprotein H3N00_05535 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal H3N00_05535 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal H3N00_05550 PF08239 Bacterial SH3 domain H3N00_05550 PF01520 N-acetylmuramoyl-L-alanine amidase H3N00_05555 PF03129 Anticodon binding domain H3N00_05555 PF13393 Histidyl-tRNA synthetase H3N00_05560 PF01336 OB-fold nucleic acid binding domain H3N00_05560 PF02938 GAD domain H3N00_05560 PF00152 tRNA synthetases class II (D, K and N) H3N00_05575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H3N00_05575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H3N00_05580 PF01165 Ribosomal protein S21 H3N00_05585 PF09424 Yqey-like protein H3N00_05590 PF02562 PhoH-like protein H3N00_05595 PF02130 Uncharacterized protein family UPF0054 H3N00_05600 PF01219 Prokaryotic diacylglycerol kinase H3N00_05605 PF01926 50S ribosome-binding GTPase H3N00_05605 PF07650 KH domain H3N00_05610 PF11967 Recombination protein O N terminal H3N00_05610 PF02565 Recombination protein O C terminal H3N00_05625 PF02091 Glycyl-tRNA synthetase alpha subunit H3N00_05630 PF02092 Glycyl-tRNA synthetase beta subunit H3N00_05640 PF03741 Integral membrane protein TerC family H3N00_05645 PF01042 Endoribonuclease L-PSP H3N00_05650 PF10282 Lactonase, 7-bladed beta-propeller H3N00_05655 PF01594 AI-2E family transporter H3N00_05660 PF00588 SpoU rRNA Methylase family H3N00_05665 PF01580 FtsK/SpoIIIE family H3N00_05665 PF09397 Ftsk gamma domain H3N00_05665 PF17854 FtsK alpha domain H3N00_05675 PF13732 Domain of unknown function (DUF4162) H3N00_05675 PF00005 ABC transporter H3N00_05690 PF01541 GIY-YIG catalytic domain H3N00_05690 PF02151 UvrB/uvrC motif H3N00_05690 PF08459 UvrC Helix-hairpin-helix N-terminal H3N00_05695 PF01018 GTP1/OBG H3N00_05695 PF09269 Domain of unknown function (DUF1967) H3N00_05695 PF01926 50S ribosome-binding GTPase H3N00_05700 PF09186 Domain of unknown function (DUF1949) H3N00_05700 PF01205 Uncharacterized protein family UPF0029 H3N00_05710 PF07690 Major Facilitator Superfamily H3N00_05715 PF00478 IMP dehydrogenase / GMP reductase domain H3N00_05715 PF00571 CBS domain H3N00_05720 PF00571 CBS domain H3N00_05720 PF00478 IMP dehydrogenase / GMP reductase domain H3N00_05725 PF13382 Adenine deaminase C-terminal domain H3N00_05725 PF01979 Amidohydrolase family H3N00_05730 PF01330 RuvA N terminal domain H3N00_05730 PF07499 RuvA, C-terminal domain H3N00_05735 PF05496 Holliday junction DNA helicase RuvB P-loop domain H3N00_05735 PF05491 RuvB C-terminal winged helix domain H3N00_05735 PF17864 RuvB AAA lid domain H3N00_05740 PF02547 Queuosine biosynthesis protein H3N00_05775 PF01702 Queuine tRNA-ribosyltransferase H3N00_05780 PF02699 Preprotein translocase subunit H3N00_05785 PF11799 impB/mucB/samB family C-terminal domain H3N00_05785 PF00817 impB/mucB/samB family H3N00_05790 PF02272 DHHA1 domain H3N00_05790 PF01368 DHH family H3N00_05795 PF00270 DEAD/DEAH box helicase H3N00_05795 PF00271 Helicase conserved C-terminal domain H3N00_05800 PF02595 Glycerate kinase family H3N00_05805 PF01411 tRNA synthetases class II (A) H3N00_05805 PF02272 DHHA1 domain H3N00_05805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H3N00_05810 PF06135 IreB regulatory phosphoprotein H3N00_05815 PF03652 Holliday junction resolvase H3N00_05820 PF06949 Protein of unknown function (DUF1292) H3N00_05825 PF06949 Protein of unknown function (DUF1292) H3N00_05835 PF03772 Competence protein H3N00_05835 PF00753 Metallo-beta-lactamase superfamily H3N00_05840 PF06144 DNA polymerase III, delta subunit H3N00_05845 PF00312 Ribosomal protein S15 H3N00_05850 PF01649 Ribosomal protein S20 H3N00_05855 PF00753 Metallo-beta-lactamase superfamily H3N00_05855 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H3N00_05855 PF17770 Ribonuclease J C-terminal domain H3N00_05865 PF03143 Elongation factor Tu C-terminal domain H3N00_05865 PF00009 Elongation factor Tu GTP binding domain H3N00_05865 PF03144 Elongation factor Tu domain 2 H3N00_05875 PF05698 Bacterial trigger factor protein (TF) C-terminus H3N00_05875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H3N00_05875 PF05697 Bacterial trigger factor protein (TF) H3N00_05880 PF06689 ClpX C4-type zinc finger H3N00_05880 PF07724 AAA domain (Cdc48 subfamily) H3N00_05880 PF10431 C-terminal, D2-small domain, of ClpB protein H3N00_05885 PF01926 50S ribosome-binding GTPase H3N00_05905 PF01713 Smr domain H3N00_05905 PF00488 MutS domain V H3N00_05930 PF00085 Thioredoxin H3N00_05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_05935 PF00204 DNA gyrase B H3N00_05935 PF00986 DNA gyrase B subunit, carboxyl terminus H3N00_05935 PF01751 Toprim domain H3N00_05940 PF03989 DNA gyrase C-terminal domain, beta-propeller H3N00_05940 PF00521 DNA gyrase/topoisomerase IV, subunit A H3N00_05945 PF03306 Alpha-acetolactate decarboxylase H3N00_05950 PF01546 Peptidase family M20/M25/M40 H3N00_05950 PF07687 Peptidase dimerisation domain H3N00_05965 PF05970 PIF1-like helicase H3N00_05965 PF02689 Helicase H3N00_05990 PF02698 DUF218 domain H3N00_05995 PF04973 Nicotinamide mononucleotide transporter H3N00_06030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H3N00_06030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H3N00_06030 PF00205 Thiamine pyrophosphate enzyme, central domain H3N00_06035 PF13276 HTH-like domain H3N00_06035 PF00665 Integrase core domain H3N00_06035 PF13333 Integrase core domain H3N00_06060 PF00465 Iron-containing alcohol dehydrogenase H3N00_06085 PF02913 FAD linked oxidases, C-terminal domain H3N00_06085 PF01565 FAD binding domain H3N00_06090 PF00155 Aminotransferase class I and II H3N00_06095 PF00056 lactate/malate dehydrogenase, NAD binding domain H3N00_06095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H3N00_06105 PF03180 NLPA lipoprotein H3N00_06120 PF02110 Hydroxyethylthiazole kinase family H3N00_06125 PF08543 Phosphomethylpyrimidine kinase H3N00_06130 PF02581 Thiamine monophosphate synthase H3N00_06150 PF00106 short chain dehydrogenase H3N00_06160 PF00480 ROK family H3N00_06240 PF13419 Haloacid dehalogenase-like hydrolase H3N00_06245 PF01177 Asp/Glu/Hydantoin racemase H3N00_06250 PF01725 Ham1 family H3N00_06260 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 H3N00_06260 PF13395 HNH endonuclease H3N00_06260 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 H3N00_06260 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 H3N00_06280 PF13395 HNH endonuclease H3N00_06280 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 H3N00_06280 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 H3N00_06280 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 H3N00_06285 PF13395 HNH endonuclease H3N00_06285 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 H3N00_06285 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 H3N00_06285 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 H3N00_06290 PF01867 CRISPR associated protein Cas1 H3N00_06295 PF09827 CRISPR associated protein Cas2 H3N00_06300 PF09711 CRISPR-associated protein (Cas_Csn2) H3N00_06310 PF04607 Region found in RelA / SpoT proteins H3N00_06315 PF01513 ATP-NAD kinase H3N00_06320 PF00849 RNA pseudouridylate synthase H3N00_06325 PF03448 MgtE intracellular N domain H3N00_06325 PF01769 Divalent cation transporter H3N00_06325 PF00571 CBS domain H3N00_06335 PF00583 Acetyltransferase (GNAT) family H3N00_06350 PF01545 Cation efflux family H3N00_06350 PF16916 Dimerisation domain of Zinc Transporter H3N00_06385 PF13333 Integrase core domain H3N00_06385 PF13276 HTH-like domain H3N00_06385 PF00665 Integrase core domain H3N00_06390 PF01266 FAD dependent oxidoreductase H3N00_06400 PF12833 Helix-turn-helix domain H3N00_06400 PF00072 Response regulator receiver domain H3N00_06410 PF02567 Phenazine biosynthesis-like protein H3N00_06415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H3N00_06415 PF00367 phosphotransferase system, EIIB H3N00_06415 PF02378 Phosphotransferase system, EIIC H3N00_06420 PF08244 Glycosyl hydrolases family 32 C terminal H3N00_06420 PF00251 Glycosyl hydrolases family 32 N-terminal domain H3N00_06440 PF03176 MMPL family H3N00_06455 PF12822 ECF transporter, substrate-specific component H3N00_06465 PF02153 Prephenate dehydrogenase H3N00_06470 PF01202 Shikimate kinase H3N00_06475 PF07690 Major Facilitator Superfamily H3N00_06480 PF01264 Chorismate synthase H3N00_06510 PF01070 FMN-dependent dehydrogenase H3N00_06525 PF02576 RimP N-terminal domain H3N00_06525 PF17384 RimP C-terminal SH3 domain H3N00_06530 PF08529 NusA N-terminal domain H3N00_06530 PF13184 NusA-like KH domain H3N00_06530 PF00575 S1 RNA binding domain H3N00_06535 PF04296 Protein of unknown function (DUF448) H3N00_06540 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family H3N00_06545 PF00009 Elongation factor Tu GTP binding domain H3N00_06545 PF11987 Translation-initiation factor 2 H3N00_06545 PF04760 Translation initiation factor IF-2, N-terminal region H3N00_06550 PF02033 Ribosome-binding factor A H3N00_06555 PF16198 tRNA pseudouridylate synthase B C-terminal domain H3N00_06555 PF01509 TruB family pseudouridylate synthase (N terminal domain) H3N00_06570 PF06574 FAD synthetase H3N00_06570 PF01687 Riboflavin kinase H3N00_06575 PF05670 NFACT protein RNA binding domain H3N00_06580 PF03932 CutC family H3N00_06595 PF11700 Vacuole effluxer Atg22 like H3N00_06600 PF02645 Uncharacterised protein, DegV family COG1307 H3N00_06605 PF02645 Uncharacterised protein, DegV family COG1307 H3N00_06610 PF13472 GDSL-like Lipase/Acylhydrolase family H3N00_06620 PF06855 YozE SAM-like fold H3N00_06625 PF01926 50S ribosome-binding GTPase H3N00_06630 PF01351 Ribonuclease HII H3N00_06640 PF01751 Toprim domain H3N00_06640 PF01396 Topoisomerase DNA binding C4 zinc finger H3N00_06640 PF01131 DNA topoisomerase H3N00_06645 PF00589 Phage integrase family H3N00_06645 PF02899 Phage integrase, N-terminal SAM-like domain H3N00_06650 PF01263 Aldose 1-epimerase H3N00_06655 PF02660 Glycerol-3-phosphate acyltransferase H3N00_06660 PF01368 DHH family H3N00_06660 PF02833 DHHA2 domain H3N00_06675 PF00571 CBS domain H3N00_06675 PF00005 ABC transporter H3N00_06680 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_06690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_06695 PF03180 NLPA lipoprotein H3N00_06700 PF01625 Peptide methionine sulfoxide reductase H3N00_06705 PF00781 Diacylglycerol kinase catalytic domain H3N00_06710 PF13419 Haloacid dehalogenase-like hydrolase H3N00_06725 PF17770 Ribonuclease J C-terminal domain H3N00_06725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H3N00_06725 PF00753 Metallo-beta-lactamase superfamily H3N00_06745 PF01327 Polypeptide deformylase H3N00_06750 PF05256 Uncharacterised protein family (UPF0223) H3N00_06755 PF00459 Inositol monophosphatase family H3N00_06765 PF01098 Cell cycle protein H3N00_06770 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) H3N00_06780 PF01467 Cytidylyltransferase-like H3N00_06785 PF05362 Lon protease (S16) C-terminal proteolytic domain H3N00_06785 PF13180 PDZ domain H3N00_06790 PF07690 Major Facilitator Superfamily H3N00_06800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H3N00_06805 PF01380 SIS domain H3N00_06810 PF01807 CHC2 zinc finger H3N00_06810 PF08275 DNA primase catalytic core, N-terminal domain H3N00_06810 PF10410 DnaB-helicase binding domain of primase H3N00_06815 PF03979 Sigma-70 factor, region 1.1 H3N00_06815 PF04542 Sigma-70 region 2 H3N00_06815 PF04545 Sigma-70, region 4 H3N00_06815 PF00140 Sigma-70 factor, region 1.2 H3N00_06815 PF04539 Sigma-70 region 3 H3N00_06835 PF07690 Major Facilitator Superfamily H3N00_06840 PF01473 Putative cell wall binding repeat H3N00_06840 PF02324 Glycosyl hydrolase family 70 H3N00_06845 PF00072 Response regulator receiver domain H3N00_06845 PF00486 Transcriptional regulatory protein, C terminal H3N00_06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_06850 PF00512 His Kinase A (phospho-acceptor) domain H3N00_06855 PF00485 Phosphoribulokinase / Uridine kinase family H3N00_06860 PF05343 M42 glutamyl aminopeptidase H3N00_06865 PF14794 Domain of unknown function (DUF4479) H3N00_06865 PF01588 Putative tRNA binding domain H3N00_06875 PF08245 Mur ligase middle domain H3N00_06875 PF02875 Mur ligase family, glutamate ligase domain H3N00_06875 PF01225 Mur ligase family, catalytic domain H3N00_06880 PF01027 Inhibitor of apoptosis-promoting Bax1 H3N00_06885 PF01367 5'-3' exonuclease, C-terminal SAM fold H3N00_06885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H3N00_06885 PF00476 DNA polymerase family A H3N00_06890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H3N00_06890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H3N00_06890 PF06827 Zinc finger found in FPG and IleRS H3N00_06895 PF01121 Dephospho-CoA kinase H3N00_06905 PF07319 Primosomal protein DnaI N-terminus H3N00_06905 PF01695 IstB-like ATP binding protein H3N00_06920 PF00486 Transcriptional regulatory protein, C terminal H3N00_06920 PF00072 Response regulator receiver domain H3N00_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_06925 PF00512 His Kinase A (phospho-acceptor) domain H3N00_06925 PF18719 ArlS sensor domain H3N00_06935 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H3N00_06935 PF05257 CHAP domain H3N00_06940 PF13276 HTH-like domain H3N00_06940 PF00665 Integrase core domain H3N00_06940 PF13333 Integrase core domain H3N00_06960 PF13520 Amino acid permease H3N00_06975 PF02096 60Kd inner membrane protein H3N00_06985 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H3N00_06985 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H3N00_06995 PF01070 FMN-dependent dehydrogenase H3N00_07000 PF08544 GHMP kinases C terminal H3N00_07000 PF00288 GHMP kinases N terminal domain H3N00_07010 PF00288 GHMP kinases N terminal domain H3N00_07010 PF08544 GHMP kinases C terminal H3N00_07010 PF10509 Galactokinase galactose-binding signature H3N00_07015 PF04851 Type III restriction enzyme, res subunit H3N00_07015 PF00929 Exonuclease H3N00_07015 PF13307 Helicase C-terminal domain H3N00_07025 PF00152 tRNA synthetases class II (D, K and N) H3N00_07025 PF01336 OB-fold nucleic acid binding domain H3N00_07030 PF07261 Replication initiation and membrane attachment H3N00_07035 PF00912 Transglycosylase H3N00_07035 PF00905 Penicillin binding protein transpeptidase domain H3N00_07040 PF03838 Recombination protein U H3N00_07045 PF06908 YspA SLOG family H3N00_07050 PF05103 DivIVA protein H3N00_07060 PF02926 THUMP domain H3N00_07060 PF01170 Putative RNA methylase family UPF0020 H3N00_07065 PF00580 UvrD/REP helicase N-terminal domain H3N00_07065 PF13361 UvrD-like helicase C-terminal domain H3N00_07070 PF12826 Helix-hairpin-helix motif H3N00_07070 PF03120 NAD-dependent DNA ligase OB-fold domain H3N00_07070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H3N00_07070 PF00533 BRCA1 C Terminus (BRCT) domain H3N00_07070 PF01653 NAD-dependent DNA ligase adenylation domain H3N00_07090 PF17757 UvrB interaction domain H3N00_07090 PF02151 UvrB/uvrC motif H3N00_07090 PF00271 Helicase conserved C-terminal domain H3N00_07090 PF12344 Ultra-violet resistance protein B H3N00_07090 PF04851 Type III restriction enzyme, res subunit H3N00_07100 PF02785 Biotin carboxylase C-terminal domain H3N00_07100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_07100 PF00289 Biotin carboxylase, N-terminal domain H3N00_07105 PF01039 Carboxyl transferase domain H3N00_07110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H3N00_07115 PF00854 POT family H3N00_07120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H3N00_07130 PF01230 HIT domain H3N00_07135 PF00005 ABC transporter H3N00_07145 PF02390 Putative methyltransferase H3N00_07150 PF10702 Protein of unknown function (DUF2507) H3N00_07155 PF03747 ADP-ribosylglycohydrolase H3N00_07180 PF02447 GntP family permease H3N00_07200 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_07200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_07205 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) H3N00_07210 PF00455 DeoR C terminal sensor domain H3N00_07210 PF08220 DeoR-like helix-turn-helix domain H3N00_07215 PF00294 pfkB family carbohydrate kinase H3N00_07220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H3N00_07220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H3N00_07225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H3N00_07230 PF00356 Bacterial regulatory proteins, lacI family H3N00_07230 PF13407 Periplasmic binding protein domain H3N00_07235 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_07235 PF00107 Zinc-binding dehydrogenase H3N00_07240 PF01384 Phosphate transporter family H3N00_07255 PF00232 Glycosyl hydrolase family 1 H3N00_07275 PF13520 Amino acid permease H3N00_07285 PF00679 Elongation factor G C-terminus H3N00_07285 PF00009 Elongation factor Tu GTP binding domain H3N00_07285 PF06421 GTP-binding protein LepA C-terminus H3N00_07295 PF00083 Sugar (and other) transporter H3N00_07305 PF02929 Beta galactosidase small chain H3N00_07310 PF02837 Glycosyl hydrolases family 2, sugar binding domain H3N00_07310 PF00703 Glycosyl hydrolases family 2 H3N00_07310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H3N00_07315 PF10431 C-terminal, D2-small domain, of ClpB protein H3N00_07315 PF00004 ATPase family associated with various cellular activities (AAA) H3N00_07315 PF07724 AAA domain (Cdc48 subfamily) H3N00_07315 PF17871 AAA lid domain H3N00_07325 PF06177 QueT transporter H3N00_07335 PF13520 Amino acid permease H3N00_07340 PF00106 short chain dehydrogenase H3N00_07360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_07375 PF00005 ABC transporter H3N00_07380 PF02687 FtsX-like permease family H3N00_07415 PF00253 Ribosomal protein S14p/S29e H3N00_07420 PF00471 Ribosomal protein L33 H3N00_07430 PF13276 HTH-like domain H3N00_07430 PF13333 Integrase core domain H3N00_07430 PF00665 Integrase core domain H3N00_07450 PF00871 Acetokinase family H3N00_07455 PF01546 Peptidase family M20/M25/M40 H3N00_07455 PF07687 Peptidase dimerisation domain H3N00_07460 PF01784 NIF3 (NGG1p interacting factor 3) H3N00_07465 PF04816 tRNA (adenine(22)-N(1))-methyltransferase H3N00_07470 PF00011 Hsp20/alpha crystallin family H3N00_07520 PF13476 AAA domain H3N00_07525 PF12320 Type 5 capsule protein repressor C-terminal domain H3N00_07525 PF00149 Calcineurin-like phosphoesterase H3N00_07530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H3N00_07530 PF00056 lactate/malate dehydrogenase, NAD binding domain H3N00_07535 PF07690 Major Facilitator Superfamily H3N00_07540 PF07155 ECF-type riboflavin transporter, S component H3N00_07545 PF08543 Phosphomethylpyrimidine kinase H3N00_07550 PF00216 Bacterial DNA-binding protein H3N00_07555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H3N00_07555 PF01926 50S ribosome-binding GTPase H3N00_07560 PF00575 S1 RNA binding domain H3N00_07565 PF02224 Cytidylate kinase H3N00_07575 PF00271 Helicase conserved C-terminal domain H3N00_07575 PF00270 DEAD/DEAH box helicase H3N00_07585 PF12822 ECF transporter, substrate-specific component H3N00_07595 PF06736 Protein of unknown function (DUF1211) H3N00_07600 PF00849 RNA pseudouridylate synthase H3N00_07600 PF01479 S4 domain H3N00_07605 PF04079 Segregation and condensation complex subunit ScpB H3N00_07610 PF02616 Segregation and condensation protein ScpA H3N00_07620 PF02899 Phage integrase, N-terminal SAM-like domain H3N00_07620 PF00589 Phage integrase family H3N00_07625 PF13509 S1 domain H3N00_07625 PF17783 CvfB-like winged helix domain H3N00_07635 PF00999 Sodium/hydrogen exchanger family H3N00_07645 PF02580 D-Tyr-tRNA(Tyr) deacylase H3N00_07650 PF04607 Region found in RelA / SpoT proteins H3N00_07650 PF02824 TGS domain H3N00_07650 PF13291 ACT domain H3N00_07655 PF07733 Bacterial DNA polymerase III alpha NTPase domain H3N00_07655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H3N00_07655 PF14579 Helix-hairpin-helix motif H3N00_07655 PF02811 PHP domain H3N00_07655 PF01336 OB-fold nucleic acid binding domain H3N00_07665 PF00186 Dihydrofolate reductase H3N00_07670 PF00005 ABC transporter H3N00_07670 PF12848 ABC transporter H3N00_07670 PF16326 ABC transporter C-terminal domain H3N00_07675 PF01743 Poly A polymerase head domain H3N00_07675 PF12627 Probable RNA and SrmB- binding site of polymerase A H3N00_07675 PF13735 tRNA nucleotidyltransferase domain 2 putative H3N00_07680 PF00005 ABC transporter H3N00_07695 PF01380 SIS domain H3N00_07700 PF00909 Ammonium Transporter Family H3N00_07710 PF02324 Glycosyl hydrolase family 70 H3N00_07710 PF01473 Putative cell wall binding repeat H3N00_07715 PF03816 Cell envelope-related transcriptional attenuator domain H3N00_07720 PF00535 Glycosyl transferase family 2 H3N00_07735 PF00535 Glycosyl transferase family 2 H3N00_07735 PF01501 Glycosyl transferase family 8 H3N00_07740 PF17101 Stealth protein CR1, conserved region 1 H3N00_07740 PF17102 Stealth protein CR3, conserved region 3 H3N00_07740 PF11380 Stealth protein CR2, conserved region 2 H3N00_07745 PF13439 Glycosyltransferase Family 4 H3N00_07745 PF00534 Glycosyl transferases group 1 H3N00_07750 PF02397 Bacterial sugar transferase H3N00_07755 PF13614 AAA domain H3N00_07760 PF13807 G-rich domain on putative tyrosine kinase H3N00_07760 PF02706 Chain length determinant protein H3N00_07770 PF01765 Ribosome recycling factor H3N00_07775 PF00696 Amino acid kinase family H3N00_07780 PF00889 Elongation factor TS H3N00_07785 PF00318 Ribosomal protein S2 H3N00_07790 PF01541 GIY-YIG catalytic domain H3N00_07795 PF05175 Methyltransferase small domain H3N00_07800 PF01553 Acyltransferase H3N00_07815 PF00877 NlpC/P60 family H3N00_07825 PF03672 Uncharacterised protein family (UPF0154) H3N00_07830 PF05979 Bacterial protein of unknown function (DUF896) H3N00_07835 PF01726 LexA DNA binding domain H3N00_07835 PF00717 Peptidase S24-like H3N00_07850 PF00156 Phosphoribosyl transferase domain H3N00_07855 PF02272 DHHA1 domain H3N00_07855 PF10141 Single-strand DNA-specific exonuclease, C terminal domain H3N00_07855 PF01368 DHH family H3N00_07855 PF17768 RecJ OB domain H3N00_07860 PF12706 Beta-lactamase superfamily domain H3N00_07860 PF00753 Metallo-beta-lactamase superfamily H3N00_07875 PF00684 DnaJ central domain H3N00_07875 PF01556 DnaJ C terminal domain H3N00_07875 PF00226 DnaJ domain H3N00_07880 PF00012 Hsp70 protein H3N00_07885 PF01025 GrpE H3N00_07890 PF01628 HrcA protein C terminal domain H3N00_07890 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding H3N00_07910 PF01473 Putative cell wall binding repeat H3N00_07910 PF02324 Glycosyl hydrolase family 70 H3N00_07920 PF00535 Glycosyl transferase family 2 H3N00_07930 PF00535 Glycosyl transferase family 2 H3N00_07940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H3N00_07940 PF13457 GW (Gly-Tryp) dipeptide domain H3N00_07955 PF03275 UDP-galactopyranose mutase H3N00_07975 PF02397 Bacterial sugar transferase H3N00_07980 PF00557 Metallopeptidase family M24 H3N00_07995 PF00877 NlpC/P60 family H3N00_08000 PF01476 LysM domain H3N00_08000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H3N00_08015 PF13333 Integrase core domain H3N00_08015 PF00665 Integrase core domain H3N00_08015 PF13276 HTH-like domain H3N00_08045 PF01467 Cytidylyltransferase-like H3N00_08050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase H3N00_08055 PF01061 ABC-2 type transporter H3N00_08060 PF01476 LysM domain H3N00_08060 PF00005 ABC transporter H3N00_08065 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_08065 PF16912 Glucose dehydrogenase C-terminus H3N00_08070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H3N00_08075 PF04991 LicD family H3N00_08085 PF00535 Glycosyl transferase family 2 H3N00_08090 PF04138 GtrA-like protein H3N00_08095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase H3N00_08100 PF00535 Glycosyl transferase family 2 H3N00_08105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H3N00_08105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H3N00_08105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H3N00_08105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H3N00_08125 PF00027 Cyclic nucleotide-binding domain H3N00_08125 PF07885 Ion channel H3N00_08165 PF13333 Integrase core domain H3N00_08165 PF00665 Integrase core domain H3N00_08165 PF13276 HTH-like domain H3N00_08210 PF02073 Thermophilic metalloprotease (M29) H3N00_08225 PF00849 RNA pseudouridylate synthase H3N00_08225 PF01479 S4 domain H3N00_08230 PF00313 'Cold-shock' DNA-binding domain H3N00_08240 PF07690 Major Facilitator Superfamily H3N00_08250 PF00485 Phosphoribulokinase / Uridine kinase family H3N00_08255 PF13538 UvrD-like helicase C-terminal domain H3N00_08265 PF00154 recA bacterial DNA recombination protein H3N00_08270 PF02464 Competence-damaged protein H3N00_08270 PF00994 Probable molybdopterin binding domain H3N00_08270 PF18146 Damage-inducible protein CinA KH domain H3N00_08275 PF01066 CDP-alcohol phosphatidyltransferase H3N00_08280 PF13464 Domain of unknown function (DUF4115) H3N00_08285 PF05193 Peptidase M16 inactive domain H3N00_08285 PF00675 Insulinase (Peptidase family M16) H3N00_08290 PF05193 Peptidase M16 inactive domain H3N00_08300 PF02447 GntP family permease H3N00_08305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H3N00_08305 PF00205 Thiamine pyrophosphate enzyme, central domain H3N00_08305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H3N00_08310 PF02447 GntP family permease H3N00_08315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H3N00_08315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H3N00_08320 PF01966 HD domain H3N00_08325 PF13514 AAA domain H3N00_08335 PF06133 Control of competence regulator ComK, YlbF/YmcA H3N00_08340 PF00912 Transglycosylase H3N00_08340 PF00905 Penicillin binding protein transpeptidase domain H3N00_08345 PF01316 Arginine repressor, DNA binding domain H3N00_08345 PF02863 Arginine repressor, C-terminal domain H3N00_08355 PF00005 ABC transporter H3N00_08355 PF00664 ABC transporter transmembrane region H3N00_08360 PF00664 ABC transporter transmembrane region H3N00_08360 PF00005 ABC transporter H3N00_08365 PF00750 tRNA synthetases class I (R) H3N00_08365 PF05746 DALR anticodon binding domain H3N00_08365 PF03485 Arginyl tRNA synthetase N terminal domain H3N00_08375 PF08245 Mur ligase middle domain H3N00_08375 PF02875 Mur ligase family, glutamate ligase domain H3N00_08380 PF01725 Ham1 family H3N00_08385 PF02875 Mur ligase family, glutamate ligase domain H3N00_08385 PF08245 Mur ligase middle domain H3N00_08390 PF00005 ABC transporter H3N00_08395 PF00950 ABC 3 transport family H3N00_08400 PF01297 Zinc-uptake complex component A periplasmic H3N00_08410 PF00781 Diacylglycerol kinase catalytic domain H3N00_08415 PF02637 GatB domain H3N00_08415 PF02934 GatB/GatE catalytic domain H3N00_08420 PF01425 Amidase H3N00_08425 PF02686 Glu-tRNAGln amidotransferase C subunit H3N00_08430 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H3N00_08430 PF17126 RsmF rRNA methyltransferase first C-terminal domain H3N00_08430 PF01189 16S rRNA methyltransferase RsmB/F H3N00_08440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) H3N00_08440 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal H3N00_08440 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain H3N00_08455 PF03551 Transcriptional regulator PadR-like family H3N00_08465 PF01566 Natural resistance-associated macrophage protein H3N00_08480 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H3N00_08480 PF00294 pfkB family carbohydrate kinase H3N00_08485 PF00248 Aldo/keto reductase family H3N00_08490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H3N00_08490 PF14572 Phosphoribosyl synthetase-associated domain H3N00_08495 PF09819 ABC-type cobalt transport system, permease component H3N00_08500 PF00005 ABC transporter H3N00_08515 PF01487 Type I 3-dehydroquinase H3N00_08520 PF01202 Shikimate kinase H3N00_08525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H3N00_08530 PF01264 Chorismate synthase H3N00_08535 PF01761 3-dehydroquinate synthase H3N00_08540 PF00793 DAHP synthetase I family H3N00_08540 PF18152 DAHP synthase ferredoxin-like domain H3N00_08545 PF01488 Shikimate / quinate 5-dehydrogenase H3N00_08545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H3N00_08545 PF08501 Shikimate dehydrogenase substrate binding domain H3N00_08560 PF12822 ECF transporter, substrate-specific component H3N00_08565 PF00155 Aminotransferase class I and II H3N00_08580 PF07722 Peptidase C26 H3N00_08585 PF01118 Semialdehyde dehydrogenase, NAD binding domain H3N00_08585 PF02774 Semialdehyde dehydrogenase, dimerisation domain H3N00_08590 PF00155 Aminotransferase class I and II H3N00_08595 PF01113 Dihydrodipicolinate reductase, N-terminus H3N00_08595 PF05173 Dihydrodipicolinate reductase, C-terminus H3N00_08600 PF00701 Dihydrodipicolinate synthetase family H3N00_08605 PF01546 Peptidase family M20/M25/M40 H3N00_08610 PF00132 Bacterial transferase hexapeptide (six repeats) H3N00_08610 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal H3N00_08610 PF14602 Hexapeptide repeat of succinyl-transferase H3N00_08615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H3N00_08615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H3N00_08620 PF00842 Alanine racemase, C-terminal domain H3N00_08620 PF01168 Alanine racemase, N-terminal domain H3N00_08625 PF13840 ACT domain H3N00_08625 PF00696 Amino acid kinase family H3N00_08635 PF00356 Bacterial regulatory proteins, lacI family H3N00_08640 PF00288 GHMP kinases N terminal domain H3N00_08640 PF08544 GHMP kinases C terminal H3N00_08645 PF12822 ECF transporter, substrate-specific component H3N00_08655 PF01325 Iron dependent repressor, N-terminal DNA binding domain H3N00_08655 PF02742 Iron dependent repressor, metal binding and dimerisation domain H3N00_08660 PF04203 Sortase domain H3N00_08675 PF02629 CoA binding domain H3N00_08675 PF06971 Putative DNA-binding protein N-terminus H3N00_08680 PF00270 DEAD/DEAH box helicase H3N00_08680 PF00271 Helicase conserved C-terminal domain H3N00_08685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H3N00_08690 PF01938 TRAM domain H3N00_08690 PF05958 tRNA (Uracil-5-)-methyltransferase H3N00_08715 PF01435 Peptidase family M48 H3N00_08720 PF04011 LemA family H3N00_08730 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system H3N00_08735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H3N00_08735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H3N00_08735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H3N00_08735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H3N00_08740 PF02388 FemAB family H3N00_08750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H3N00_08755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H3N00_08760 PF01039 Carboxyl transferase domain H3N00_08765 PF00289 Biotin carboxylase, N-terminal domain H3N00_08765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_08765 PF02785 Biotin carboxylase C-terminal domain H3N00_08770 PF07977 FabA-like domain H3N00_08775 PF00364 Biotin-requiring enzyme H3N00_08780 PF02801 Beta-ketoacyl synthase, C-terminal domain H3N00_08780 PF00109 Beta-ketoacyl synthase, N-terminal domain H3N00_08790 PF00698 Acyl transferase domain H3N00_08795 PF03060 Nitronate monooxygenase H3N00_08800 PF00550 Phosphopantetheine attachment site H3N00_08805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H3N00_08805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H3N00_08810 PF01047 MarR family H3N00_08815 PF07977 FabA-like domain H3N00_08825 PF00206 Lyase H3N00_08825 PF10397 Adenylosuccinate lyase C-terminus H3N00_08835 PF02142 MGS-like domain H3N00_08835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H3N00_08835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_08840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H3N00_08840 PF00117 Glutamine amidotransferase class-I H3N00_08845 PF00156 Phosphoribosyl transferase domain H3N00_08850 PF01479 S4 domain H3N00_08850 PF00849 RNA pseudouridylate synthase H3N00_08860 PF13456 Reverse transcriptase-like H3N00_08870 PF02074 Carboxypeptidase Taq (M32) metallopeptidase H3N00_08875 PF00324 Amino acid permease H3N00_08890 PF13276 HTH-like domain H3N00_08890 PF00665 Integrase core domain H3N00_08890 PF13333 Integrase core domain H3N00_08990 PF13333 Integrase core domain H3N00_08990 PF00665 Integrase core domain H3N00_08990 PF13276 HTH-like domain H3N00_09005 PF01381 Helix-turn-helix H3N00_09025 PF02899 Phage integrase, N-terminal SAM-like domain H3N00_09025 PF00589 Phage integrase family H3N00_09030 PF01197 Ribosomal protein L31 H3N00_09035 PF00009 Elongation factor Tu GTP binding domain H3N00_09035 PF00679 Elongation factor G C-terminus H3N00_09035 PF03144 Elongation factor Tu domain 2 H3N00_09035 PF06421 GTP-binding protein LepA C-terminus H3N00_09040 PF00248 Aldo/keto reductase family H3N00_09050 PF00465 Iron-containing alcohol dehydrogenase H3N00_09050 PF00171 Aldehyde dehydrogenase family H3N00_09055 PF00334 Nucleoside diphosphate kinase H3N00_09060 PF13396 Phospholipase_D-nuclease N-terminal H3N00_09060 PF13091 PLD-like domain H3N00_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H3N00_09065 PF03466 LysR substrate binding domain H3N00_09070 PF00162 Phosphoglycerate kinase H3N00_09075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H3N00_09075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H3N00_09110 PF01223 DNA/RNA non-specific endonuclease H3N00_09120 PF00300 Histidine phosphatase superfamily (branch 1) H3N00_09130 PF03613 PTS system mannose/fructose/sorbose family IID component H3N00_09135 PF03609 PTS system sorbose-specific iic component H3N00_09140 PF03830 PTS system sorbose subfamily IIB component H3N00_09140 PF03610 PTS system fructose IIA component H3N00_09165 PF03747 ADP-ribosylglycohydrolase H3N00_09225 PF00884 Sulfatase H3N00_09240 PF00534 Glycosyl transferases group 1 H3N00_09240 PF13439 Glycosyltransferase Family 4 H3N00_09245 PF13439 Glycosyltransferase Family 4 H3N00_09245 PF00534 Glycosyl transferases group 1 H3N00_09250 PF00156 Phosphoribosyl transferase domain H3N00_09255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H3N00_09260 PF01180 Dihydroorotate dehydrogenase H3N00_09265 PF02142 MGS-like domain H3N00_09265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H3N00_09265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H3N00_09270 PF00117 Glutamine amidotransferase class-I H3N00_09270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H3N00_09275 PF01979 Amidohydrolase family H3N00_09280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H3N00_09280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H3N00_09300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H3N00_09300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H3N00_09300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H3N00_09300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H3N00_09305 PF07949 YbbR-like protein H3N00_09310 PF02457 DisA bacterial checkpoint controller nucleotide-binding H3N00_09315 PF00999 Sodium/hydrogen exchanger family H3N00_09320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H3N00_09320 PF01565 FAD binding domain H3N00_09325 PF00929 Exonuclease H3N00_09325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H3N00_09325 PF14579 Helix-hairpin-helix motif H3N00_09325 PF11490 DNA polymerase III polC-type N-terminus II H3N00_09325 PF07733 Bacterial DNA polymerase III alpha NTPase domain H3N00_09325 PF02811 PHP domain H3N00_09335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H3N00_09340 PF01515 Phosphate acetyl/butaryl transferase H3N00_09345 PF03167 Uracil DNA glycosylase superfamily H3N00_09355 PF00893 Small Multidrug Resistance protein H3N00_09360 PF00893 Small Multidrug Resistance protein H3N00_09365 PF00005 ABC transporter H3N00_09370 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09375 PF07690 Major Facilitator Superfamily H3N00_09385 PF01668 SmpB protein H3N00_09390 PF00773 RNB domain H3N00_09390 PF00575 S1 RNA binding domain H3N00_09390 PF08206 Ribonuclease B OB domain H3N00_09390 PF17876 Cold shock domain H3N00_09400 PF07690 Major Facilitator Superfamily H3N00_09405 PF01425 Amidase H3N00_09410 PF00113 Enolase, C-terminal TIM barrel domain H3N00_09410 PF03952 Enolase, N-terminal domain H3N00_09425 PF00121 Triosephosphate isomerase H3N00_09430 PF02896 PEP-utilising enzyme, TIM barrel domain H3N00_09430 PF00391 PEP-utilising enzyme, mobile domain H3N00_09430 PF05524 PEP-utilising enzyme, N-terminal H3N00_09435 PF00381 PTS HPr component phosphorylation site H3N00_09445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H3N00_09445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H3N00_09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_09470 PF00483 Nucleotidyl transferase H3N00_09475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H3N00_09475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H3N00_09480 PF02603 HPr Serine kinase N terminus H3N00_09480 PF07475 HPr Serine kinase C-terminal domain H3N00_09485 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV H3N00_09495 PF00582 Universal stress protein family H3N00_09505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H3N00_09510 PF13416 Bacterial extracellular solute-binding protein H3N00_09515 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09520 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09525 PF08402 TOBE domain H3N00_09525 PF00005 ABC transporter H3N00_09535 PF03144 Elongation factor Tu domain 2 H3N00_09535 PF00009 Elongation factor Tu GTP binding domain H3N00_09535 PF03764 Elongation factor G, domain IV H3N00_09535 PF14492 Elongation Factor G, domain II H3N00_09535 PF00679 Elongation factor G C-terminus H3N00_09540 PF00177 Ribosomal protein S7p/S5e H3N00_09545 PF00164 Ribosomal protein S12/S23 H3N00_09555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_09555 PF00005 ABC transporter H3N00_09560 PF00005 ABC transporter H3N00_09560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_09565 PF12911 N-terminal TM domain of oligopeptide transport permease C H3N00_09565 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09570 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H3N00_09580 PF01842 ACT domain H3N00_09580 PF03447 Homoserine dehydrogenase, NAD binding domain H3N00_09580 PF00742 Homoserine dehydrogenase H3N00_09585 PF01053 Cys/Met metabolism PLP-dependent enzyme H3N00_09590 PF04204 Homoserine O-succinyltransferase H3N00_09605 PF00453 Ribosomal protein L20 H3N00_09605 PF12949 HeH/LEM domain H3N00_09610 PF01632 Ribosomal protein L35 H3N00_09615 PF05198 Translation initiation factor IF-3, N-terminal domain H3N00_09615 PF00707 Translation initiation factor IF-3, C-terminal domain H3N00_09620 PF01029 NusB family H3N00_09625 PF03780 Asp23 family, cell envelope-related function H3N00_09630 PF08207 Elongation factor P (EF-P) KOW-like domain H3N00_09630 PF09285 Elongation factor P, C-terminal H3N00_09630 PF01132 Elongation factor P (EF-P) OB domain H3N00_09635 PF00342 Phosphoglucose isomerase H3N00_09640 PF01263 Aldose 1-epimerase H3N00_09645 PF00480 ROK family H3N00_09650 PF06800 Sugar transport protein H3N00_09670 PF00672 HAMP domain H3N00_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_09670 PF00512 His Kinase A (phospho-acceptor) domain H3N00_09675 PF00072 Response regulator receiver domain H3N00_09675 PF00486 Transcriptional regulatory protein, C terminal H3N00_09680 PF03389 MobA/MobL family H3N00_09680 PF17841 BID domain of Bartonella effector protein (Bep) H3N00_09680 PF01443 Viral (Superfamily 1) RNA helicase H3N00_09685 PF07969 Amidohydrolase family H3N00_09690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H3N00_09690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H3N00_09700 PF01751 Toprim domain H3N00_09700 PF01131 DNA topoisomerase H3N00_09700 PF13342 C-terminal repeat of topoisomerase H3N00_09715 PF00924 Mechanosensitive ion channel H3N00_09725 PF00005 ABC transporter H3N00_09730 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09745 PF00206 Lyase H3N00_09745 PF10397 Adenylosuccinate lyase C-terminus H3N00_09770 PF00478 IMP dehydrogenase / GMP reductase domain H3N00_09780 PF00106 short chain dehydrogenase H3N00_09805 PF03051 Peptidase C1-like family H3N00_09830 PF01156 Inosine-uridine preferring nucleoside hydrolase H3N00_09855 PF13333 Integrase core domain H3N00_09855 PF00665 Integrase core domain H3N00_09855 PF13276 HTH-like domain H3N00_09885 PF02086 D12 class N6 adenine-specific DNA methyltransferase H3N00_09895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H3N00_09900 PF00294 pfkB family carbohydrate kinase H3N00_09900 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H3N00_09910 PF05025 RbsD / FucU transport protein family H3N00_09915 PF00356 Bacterial regulatory proteins, lacI family H3N00_09925 PF01380 SIS domain H3N00_09930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H3N00_09935 PF00294 pfkB family carbohydrate kinase H3N00_09950 PF00356 Bacterial regulatory proteins, lacI family H3N00_09965 PF07690 Major Facilitator Superfamily H3N00_09985 PF00005 ABC transporter H3N00_09990 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_09995 PF00809 Pterin binding enzyme H3N00_10000 PF02875 Mur ligase family, glutamate ligase domain H3N00_10000 PF08245 Mur ligase middle domain H3N00_10005 PF01227 GTP cyclohydrolase I H3N00_10010 PF01227 GTP cyclohydrolase I H3N00_10010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H3N00_10035 PF00326 Prolyl oligopeptidase family H3N00_10035 PF07676 WD40-like Beta Propeller Repeat H3N00_10040 PF03180 NLPA lipoprotein H3N00_10055 PF13419 Haloacid dehalogenase-like hydrolase H3N00_10060 PF03636 Glycosyl hydrolase family 65, N-terminal domain H3N00_10060 PF03632 Glycosyl hydrolase family 65 central catalytic domain H3N00_10060 PF03633 Glycosyl hydrolase family 65, C-terminal domain H3N00_10070 PF00356 Bacterial regulatory proteins, lacI family H3N00_10100 PF02687 FtsX-like permease family H3N00_10105 PF00005 ABC transporter H3N00_10110 PF06993 Protein of unknown function (DUF1304) H3N00_10130 PF00696 Amino acid kinase family H3N00_10135 PF13520 Amino acid permease H3N00_10140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H3N00_10140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H3N00_10150 PF00013 KH domain H3N00_10150 PF01966 HD domain H3N00_10150 PF12072 Domain of unknown function (DUF3552) H3N00_10205 PF00534 Glycosyl transferases group 1 H3N00_10215 PF00534 Glycosyl transferases group 1 H3N00_10245 PF07690 Major Facilitator Superfamily H3N00_10270 PF00440 Bacterial regulatory proteins, tetR family H3N00_10285 PF02378 Phosphotransferase system, EIIC H3N00_10285 PF00367 phosphotransferase system, EIIB H3N00_10285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H3N00_10290 PF03123 CAT RNA binding domain H3N00_10290 PF00874 PRD domain H3N00_10295 PF00232 Glycosyl hydrolase family 1 H3N00_10300 PF00480 ROK family H3N00_10325 PF00575 S1 RNA binding domain H3N00_10325 PF16921 Tex protein YqgF-like domain H3N00_10325 PF17674 HHH domain H3N00_10325 PF09371 Tex-like protein N-terminal domain H3N00_10335 PF01053 Cys/Met metabolism PLP-dependent enzyme H3N00_10340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H3N00_10340 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus H3N00_10345 PF00271 Helicase conserved C-terminal domain H3N00_10345 PF04851 Type III restriction enzyme, res subunit H3N00_10350 PF12849 PBP superfamily domain H3N00_10425 PF07733 Bacterial DNA polymerase III alpha NTPase domain H3N00_10425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H3N00_10425 PF14579 Helix-hairpin-helix motif H3N00_10425 PF02811 PHP domain H3N00_10425 PF00929 Exonuclease H3N00_10425 PF14480 DNA polymerase III polC-type N-terminus I H3N00_10425 PF11490 DNA polymerase III polC-type N-terminus II H3N00_10430 PF03129 Anticodon binding domain H3N00_10430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H3N00_10430 PF04073 Aminoacyl-tRNA editing domain H3N00_10435 PF17820 PDZ domain H3N00_10435 PF02163 Peptidase family M50 H3N00_10445 PF01255 Putative undecaprenyl diphosphate synthase H3N00_10455 PF04138 GtrA-like protein H3N00_10480 PF04474 Protein of unknown function (DUF554) H3N00_10485 PF00465 Iron-containing alcohol dehydrogenase H3N00_10495 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_10500 PF00571 CBS domain H3N00_10500 PF00005 ABC transporter H3N00_10505 PF01641 SelR domain H3N00_10530 PF00885 6,7-dimethyl-8-ribityllumazine synthase H3N00_10535 PF00925 GTP cyclohydrolase II H3N00_10535 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H3N00_10540 PF00677 Lumazine binding domain H3N00_10545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H3N00_10545 PF01872 RibD C-terminal domain H3N00_10550 PF00893 Small Multidrug Resistance protein H3N00_10555 PF00893 Small Multidrug Resistance protein H3N00_10565 PF00265 Thymidine kinase H3N00_10585 PF13333 Integrase core domain H3N00_10585 PF13276 HTH-like domain H3N00_10585 PF00665 Integrase core domain H3N00_10600 PF02645 Uncharacterised protein, DegV family COG1307 H3N00_10605 PF00248 Aldo/keto reductase family H3N00_10610 PF17760 UvrA interaction domain H3N00_10610 PF17755 UvrA DNA-binding domain H3N00_10610 PF00005 ABC transporter H3N00_10615 PF07690 Major Facilitator Superfamily H3N00_10630 PF01979 Amidohydrolase family H3N00_10635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H3N00_10640 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_10640 PF00107 Zinc-binding dehydrogenase H3N00_10655 PF00665 Integrase core domain H3N00_10655 PF13936 Helix-turn-helix domain H3N00_10670 PF00583 Acetyltransferase (GNAT) family H3N00_10700 PF00709 Adenylosuccinate synthetase H3N00_10705 PF00689 Cation transporting ATPase, C-terminus H3N00_10705 PF00690 Cation transporter/ATPase, N-terminus H3N00_10710 PF00860 Permease family H3N00_10720 PF02581 Thiamine monophosphate synthase H3N00_10725 PF06160 Septation ring formation regulator, EzrA H3N00_10735 PF07690 Major Facilitator Superfamily H3N00_10740 PF00163 Ribosomal protein S4/S9 N-terminal domain H3N00_10740 PF01479 S4 domain H3N00_10750 PF07702 UTRA domain H3N00_10750 PF00392 Bacterial regulatory proteins, gntR family H3N00_10755 PF01979 Amidohydrolase family H3N00_10760 PF00005 ABC transporter H3N00_10760 PF02687 FtsX-like permease family H3N00_10760 PF12704 MacB-like periplasmic core domain H3N00_10775 PF12833 Helix-turn-helix domain H3N00_10775 PF02805 Metal binding domain of Ada H3N00_10775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H3N00_10775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H3N00_10800 PF03807 NADP oxidoreductase coenzyme F420-dependent H3N00_10800 PF14748 Pyrroline-5-carboxylate reductase dimerisation H3N00_10805 PF01098 Cell cycle protein H3N00_10820 PF02875 Mur ligase family, glutamate ligase domain H3N00_10820 PF08245 Mur ligase middle domain H3N00_10820 PF01225 Mur ligase family, catalytic domain H3N00_10845 PF13333 Integrase core domain H3N00_10845 PF13276 HTH-like domain H3N00_10845 PF00665 Integrase core domain H3N00_10860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_10860 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_10870 PF01022 Bacterial regulatory protein, arsR family H3N00_10875 PF01594 AI-2E family transporter H3N00_10880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H3N00_10880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H3N00_10885 PF01063 Amino-transferase class IV H3N00_10890 PF01906 Putative heavy-metal-binding H3N00_10900 PF00255 Glutathione peroxidase H3N00_10905 PF00300 Histidine phosphatase superfamily (branch 1) H3N00_10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_10935 PF02608 ABC transporter substrate-binding protein PnrA-like H3N00_10945 PF08544 GHMP kinases C terminal H3N00_10945 PF00288 GHMP kinases N terminal domain H3N00_10950 PF04304 Protein of unknown function (DUF454) H3N00_10975 PF07687 Peptidase dimerisation domain H3N00_10975 PF01546 Peptidase family M20/M25/M40 H3N00_10985 PF07690 Major Facilitator Superfamily H3N00_10990 PF00772 DnaB-like helicase N terminal domain H3N00_10990 PF03796 DnaB-like helicase C terminal domain H3N00_10995 PF03948 Ribosomal protein L9, C-terminal domain H3N00_10995 PF01281 Ribosomal protein L9, N-terminal domain H3N00_11000 PF02272 DHHA1 domain H3N00_11000 PF01368 DHH family H3N00_11005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_11005 PF00005 ABC transporter H3N00_11010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H3N00_11010 PF00005 ABC transporter H3N00_11015 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_11015 PF12911 N-terminal TM domain of oligopeptide transport permease C H3N00_11020 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_11030 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_11035 PF00528 Binding-protein-dependent transport system inner membrane component H3N00_11040 PF00497 Bacterial extracellular solute-binding proteins, family 3 H3N00_11045 PF00005 ABC transporter H3N00_11060 PF00625 Guanylate kinase H3N00_11065 PF02632 BioY family H3N00_11070 PF02237 Biotin protein ligase C terminal domain H3N00_11070 PF03099 Biotin/lipoate A/B protein ligase family H3N00_11090 PF01546 Peptidase family M20/M25/M40 H3N00_11100 PF01256 Carbohydrate kinase H3N00_11110 PF00579 tRNA synthetases class I (W and Y) H3N00_11115 PF13538 UvrD-like helicase C-terminal domain H3N00_11135 PF04914 DltD protein H3N00_11140 PF00550 Phosphopantetheine attachment site H3N00_11145 PF03062 MBOAT, membrane-bound O-acyltransferase family H3N00_11150 PF13193 AMP-binding enzyme C-terminal domain H3N00_11150 PF00501 AMP-binding enzyme H3N00_11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_11160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_11165 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system H3N00_11170 PF01168 Alanine racemase, N-terminal domain H3N00_11170 PF00842 Alanine racemase, C-terminal domain H3N00_11175 PF00270 DEAD/DEAH box helicase H3N00_11175 PF00271 Helicase conserved C-terminal domain H3N00_11180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H3N00_11185 PF00117 Glutamine amidotransferase class-I H3N00_11185 PF06418 CTP synthase N-terminus H3N00_11195 PF05066 HB1, ASXL, restriction endonuclease HTH domain H3N00_11205 PF01966 HD domain H3N00_11215 PF13180 PDZ domain H3N00_11220 PF00753 Metallo-beta-lactamase superfamily H3N00_11235 PF13426 PAS domain H3N00_11235 PF00512 His Kinase A (phospho-acceptor) domain H3N00_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H3N00_11235 PF00672 HAMP domain H3N00_11240 PF00486 Transcriptional regulatory protein, C terminal H3N00_11240 PF00072 Response regulator receiver domain H3N00_11270 PF01084 Ribosomal protein S18 H3N00_11275 PF00436 Single-strand binding protein family H3N00_11280 PF01250 Ribosomal protein S6 H3N00_11290 PF01156 Inosine-uridine preferring nucleoside hydrolase H3N00_11295 PF14572 Phosphoribosyl synthetase-associated domain H3N00_11295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H3N00_11300 PF12804 MobA-like NTP transferase domain H3N00_11300 PF00132 Bacterial transferase hexapeptide (six repeats) H3N00_11305 PF00156 Phosphoribosyl transferase domain H3N00_11305 PF09182 Bacterial purine repressor, N-terminal H3N00_11310 PF00293 NUDIX domain H3N00_11315 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H3N00_11315 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H3N00_11320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H3N00_11320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H3N00_11325 PF07690 Major Facilitator Superfamily H3N00_11330 PF08240 Alcohol dehydrogenase GroES-like domain H3N00_11330 PF00107 Zinc-binding dehydrogenase H3N00_11335 PF13361 UvrD-like helicase C-terminal domain H3N00_11335 PF00580 UvrD/REP helicase N-terminal domain H3N00_11335 PF12705 PD-(D/E)XK nuclease superfamily H3N00_11340 PF12705 PD-(D/E)XK nuclease superfamily H3N00_11345 PF00465 Iron-containing alcohol dehydrogenase H3N00_11345 PF00171 Aldehyde dehydrogenase family H3N00_11355 PF03167 Uracil DNA glycosylase superfamily H3N00_11360 PF13276 HTH-like domain H3N00_11360 PF00665 Integrase core domain H3N00_11360 PF13333 Integrase core domain H3N00_11375 PF03632 Glycosyl hydrolase family 65 central catalytic domain H3N00_11375 PF03636 Glycosyl hydrolase family 65, N-terminal domain H3N00_11375 PF03633 Glycosyl hydrolase family 65, C-terminal domain H3N00_11380 PF01263 Aldose 1-epimerase H3N00_11385 PF13419 Haloacid dehalogenase-like hydrolase H3N00_11415 PF00403 Heavy-metal-associated domain H3N00_11425 PF00210 Ferritin-like domain H3N00_11430 PF13545 Crp-like helix-turn-helix domain H3N00_11430 PF00027 Cyclic nucleotide-binding domain H3N00_11440 PF13333 Integrase core domain H3N00_11440 PF00665 Integrase core domain H3N00_11440 PF13276 HTH-like domain H3N00_11450 PF03780 Asp23 family, cell envelope-related function H3N00_11465 PF04226 Transglycosylase associated protein H3N00_11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_11485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H3N00_11495 PF07992 Pyridine nucleotide-disulphide oxidoreductase H3N00_11500 PF01177 Asp/Glu/Hydantoin racemase H3N00_11505 PF00085 Thioredoxin H3N00_11510 PF00085 Thioredoxin H3N00_11515 PF01022 Bacterial regulatory protein, arsR family H3N00_11525 PF13614 AAA domain H3N00_11530 PF02397 Bacterial sugar transferase H3N00_11550 PF00483 Nucleotidyl transferase H3N00_11555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H3N00_11560 PF16363 GDP-mannose 4,6 dehydratase H3N00_11565 PF04321 RmlD substrate binding domain H3N00_11580 PF01381 Helix-turn-helix H3N00_11600 PF17841 BID domain of Bartonella effector protein (Bep) H3N00_11600 PF01443 Viral (Superfamily 1) RNA helicase H3N00_11600 PF03389 MobA/MobL family H3N00_11610 PF13276 HTH-like domain H3N00_11610 PF00665 Integrase core domain H3N00_11610 PF13333 Integrase core domain H3N00_11630 PF00665 Integrase core domain H3N00_11630 PF13333 Integrase core domain H3N00_11630 PF13276 HTH-like domain H3N00_11640 PF00535 Glycosyl transferase family 2 H3N00_11655 PF13276 HTH-like domain H3N00_11655 PF13333 Integrase core domain H3N00_11655 PF00665 Integrase core domain H3N00_11665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H3N00_11665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H3N00_11665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain