locus-tag	class	description
CHR48_00006	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00007	PF00005	ABC transporter
CHR48_00009	PF00924	Mechanosensitive ion channel
CHR48_00012	PF13342	C-terminal repeat of topoisomerase
CHR48_00012	PF01131	DNA topoisomerase
CHR48_00012	PF01751	Toprim domain
CHR48_00014	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CHR48_00014	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CHR48_00015	PF07969	Amidohydrolase family
CHR48_00016	PF01443	Viral (Superfamily 1) RNA helicase
CHR48_00016	PF17841	BID domain of Bartonella effector protein (Bep)
CHR48_00016	PF03389	MobA/MobL family
CHR48_00017	PF00072	Response regulator receiver domain
CHR48_00017	PF00486	Transcriptional regulatory protein, C terminal
CHR48_00018	PF00672	HAMP domain
CHR48_00018	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_00018	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_00019	PF06800	Sugar transport protein
CHR48_00020	PF00480	ROK family
CHR48_00021	PF01263	Aldose 1-epimerase
CHR48_00022	PF00342	Phosphoglucose isomerase
CHR48_00023	PF01132	Elongation factor P (EF-P) OB domain
CHR48_00023	PF09285	Elongation factor P, C-terminal
CHR48_00023	PF08207	Elongation factor P (EF-P) KOW-like domain
CHR48_00024	PF03780	Asp23 family, cell envelope-related function
CHR48_00025	PF01029	NusB family
CHR48_00026	PF00707	Translation initiation factor IF-3, C-terminal domain
CHR48_00026	PF05198	Translation initiation factor IF-3, N-terminal domain
CHR48_00027	PF01632	Ribosomal protein L35
CHR48_00028	PF00453	Ribosomal protein L20
CHR48_00028	PF12949	HeH/LEM domain
CHR48_00031	PF04204	Homoserine O-succinyltransferase 
CHR48_00032	PF01053	Cys/Met metabolism PLP-dependent enzyme
CHR48_00033	PF03447	Homoserine dehydrogenase, NAD binding domain
CHR48_00033	PF00742	Homoserine dehydrogenase
CHR48_00033	PF01842	ACT domain
CHR48_00034	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_00035	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00036	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00036	PF12911	N-terminal TM domain of oligopeptide transport permease C
CHR48_00037	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_00037	PF00005	ABC transporter
CHR48_00038	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_00038	PF00005	ABC transporter
CHR48_00040	PF00164	Ribosomal protein S12/S23
CHR48_00041	PF00177	Ribosomal protein S7p/S5e
CHR48_00042	PF03764	Elongation factor G, domain IV
CHR48_00042	PF14492	Elongation Factor G, domain II
CHR48_00042	PF03144	Elongation factor Tu domain 2
CHR48_00042	PF00009	Elongation factor Tu GTP binding domain
CHR48_00042	PF00679	Elongation factor G C-terminus
CHR48_00044	PF08402	TOBE domain
CHR48_00044	PF00005	ABC transporter
CHR48_00045	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00046	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00047	PF13416	Bacterial extracellular solute-binding protein
CHR48_00048	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CHR48_00050	PF00582	Universal stress protein family
CHR48_00052	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
CHR48_00053	PF02603	HPr Serine kinase N terminus
CHR48_00053	PF07475	HPr Serine kinase C-terminal domain
CHR48_00054	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CHR48_00054	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CHR48_00055	PF00483	Nucleotidyl transferase
CHR48_00059	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00060	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CHR48_00060	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CHR48_00062	PF00381	PTS HPr component phosphorylation site
CHR48_00063	PF02896	PEP-utilising enzyme, TIM barrel domain
CHR48_00063	PF00391	PEP-utilising enzyme, mobile domain
CHR48_00063	PF05524	PEP-utilising enzyme, N-terminal
CHR48_00064	PF00121	Triosephosphate isomerase
CHR48_00067	PF03952	Enolase, N-terminal domain
CHR48_00067	PF00113	Enolase, C-terminal TIM barrel domain
CHR48_00068	PF01425	Amidase
CHR48_00071	PF08206	Ribonuclease B OB domain
CHR48_00071	PF17876	Cold shock domain
CHR48_00071	PF00575	S1 RNA binding domain
CHR48_00071	PF00773	RNB domain
CHR48_00072	PF01668	SmpB protein
CHR48_00074	PF07690	Major Facilitator Superfamily
CHR48_00075	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00076	PF00005	ABC transporter
CHR48_00077	PF00893	Small Multidrug Resistance protein
CHR48_00078	PF00893	Small Multidrug Resistance protein
CHR48_00080	PF03167	Uracil DNA glycosylase superfamily
CHR48_00081	PF01515	Phosphate acetyl/butaryl transferase
CHR48_00082	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CHR48_00084	PF00929	Exonuclease
CHR48_00084	PF14480	DNA polymerase III polC-type N-terminus I
CHR48_00084	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CHR48_00084	PF14579	Helix-hairpin-helix motif
CHR48_00084	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CHR48_00084	PF02811	PHP domain
CHR48_00084	PF11490	DNA polymerase III polC-type N-terminus II
CHR48_00085	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CHR48_00085	PF01565	FAD binding domain 
CHR48_00086	PF00999	Sodium/hydrogen exchanger family
CHR48_00087	PF02457	DisA bacterial checkpoint controller nucleotide-binding
CHR48_00088	PF07949	YbbR-like protein
CHR48_00089	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CHR48_00089	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CHR48_00089	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CHR48_00089	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CHR48_00094	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CHR48_00094	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CHR48_00095	PF01979	Amidohydrolase family
CHR48_00096	PF00117	Glutamine amidotransferase class-I
CHR48_00096	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CHR48_00097	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_00097	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CHR48_00097	PF02142	MGS-like domain
CHR48_00098	PF01180	Dihydroorotate dehydrogenase
CHR48_00099	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CHR48_00100	PF00156	Phosphoribosyl transferase domain
CHR48_00101	PF13439	Glycosyltransferase Family 4
CHR48_00101	PF00534	Glycosyl transferases group 1
CHR48_00102	PF13439	Glycosyltransferase Family 4
CHR48_00102	PF00534	Glycosyl transferases group 1
CHR48_00105	PF00884	Sulfatase
CHR48_00117	PF03747	ADP-ribosylglycohydrolase
CHR48_00119	PF03610	PTS system fructose IIA component
CHR48_00119	PF03830	PTS system sorbose subfamily IIB component
CHR48_00120	PF03609	PTS system sorbose-specific iic component
CHR48_00121	PF03613	PTS system mannose/fructose/sorbose family IID component
CHR48_00123	PF00300	Histidine phosphatase superfamily (branch 1)
CHR48_00125	PF01223	DNA/RNA non-specific endonuclease
CHR48_00132	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CHR48_00132	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CHR48_00133	PF00162	Phosphoglycerate kinase
CHR48_00134	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CHR48_00134	PF03466	LysR substrate binding domain
CHR48_00135	PF13091	PLD-like domain
CHR48_00135	PF13396	Phospholipase_D-nuclease N-terminal
CHR48_00136	PF00334	Nucleoside diphosphate kinase
CHR48_00137	PF00465	Iron-containing alcohol dehydrogenase 
CHR48_00137	PF00171	Aldehyde dehydrogenase family
CHR48_00139	PF00248	Aldo/keto reductase family
CHR48_00141	PF00009	Elongation factor Tu GTP binding domain
CHR48_00141	PF06421	GTP-binding protein LepA C-terminus
CHR48_00141	PF00679	Elongation factor G C-terminus
CHR48_00141	PF03144	Elongation factor Tu domain 2
CHR48_00142	PF01197	Ribosomal protein L31
CHR48_00145	PF00324	Amino acid permease
CHR48_00146	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
CHR48_00148	PF13456	Reverse transcriptase-like
CHR48_00150	PF00849	RNA pseudouridylate synthase
CHR48_00150	PF01479	S4 domain
CHR48_00151	PF00156	Phosphoribosyl transferase domain
CHR48_00152	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CHR48_00152	PF00117	Glutamine amidotransferase class-I
CHR48_00153	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_00153	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CHR48_00153	PF02142	MGS-like domain
CHR48_00155	PF00206	Lyase
CHR48_00155	PF10397	Adenylosuccinate lyase C-terminus
CHR48_00157	PF07977	FabA-like domain
CHR48_00158	PF01047	MarR family
CHR48_00159	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CHR48_00159	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CHR48_00160	PF00550	Phosphopantetheine attachment site
CHR48_00161	PF03060	Nitronate monooxygenase
CHR48_00162	PF00698	Acyl transferase domain
CHR48_00164	PF00109	Beta-ketoacyl synthase, N-terminal domain
CHR48_00164	PF02801	Beta-ketoacyl synthase, C-terminal domain
CHR48_00165	PF00364	Biotin-requiring enzyme
CHR48_00166	PF07977	FabA-like domain
CHR48_00167	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_00167	PF00289	Biotin carboxylase, N-terminal domain
CHR48_00167	PF02785	Biotin carboxylase C-terminal domain
CHR48_00168	PF01039	Carboxyl transferase domain
CHR48_00169	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CHR48_00170	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CHR48_00172	PF02388	FemAB family
CHR48_00173	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CHR48_00173	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CHR48_00173	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CHR48_00173	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CHR48_00174	PF06769	YoeB-like toxin of bacterial type II toxin-antitoxin system
CHR48_00176	PF04011	LemA family
CHR48_00177	PF01435	Peptidase family M48
CHR48_00179	PF05958	tRNA (Uracil-5-)-methyltransferase
CHR48_00179	PF01938	TRAM domain
CHR48_00180	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CHR48_00181	PF00270	DEAD/DEAH box helicase
CHR48_00181	PF00271	Helicase conserved C-terminal domain
CHR48_00182	PF06971	Putative DNA-binding protein N-terminus
CHR48_00182	PF02629	CoA binding domain
CHR48_00185	PF04203	Sortase domain
CHR48_00186	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CHR48_00186	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CHR48_00188	PF12822	ECF transporter, substrate-specific component
CHR48_00189	PF00288	GHMP kinases N terminal domain
CHR48_00189	PF08544	GHMP kinases C terminal 
CHR48_00190	PF00356	Bacterial regulatory proteins, lacI family
CHR48_00192	PF00696	Amino acid kinase family
CHR48_00192	PF13840	ACT domain 
CHR48_00193	PF00842	Alanine racemase, C-terminal domain
CHR48_00193	PF01168	Alanine racemase, N-terminal domain
CHR48_00194	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CHR48_00194	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CHR48_00195	PF14602	Hexapeptide repeat of succinyl-transferase
CHR48_00195	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
CHR48_00195	PF00132	Bacterial transferase hexapeptide (six repeats)
CHR48_00196	PF01546	Peptidase family M20/M25/M40
CHR48_00197	PF00701	Dihydrodipicolinate synthetase family
CHR48_00198	PF05173	Dihydrodipicolinate reductase, C-terminus
CHR48_00198	PF01113	Dihydrodipicolinate reductase, N-terminus
CHR48_00199	PF00155	Aminotransferase class I and II
CHR48_00200	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CHR48_00200	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CHR48_00201	PF07722	Peptidase C26
CHR48_00208	PF01381	Helix-turn-helix
CHR48_00239	PF17288	Terminase RNAseH like domain
CHR48_00239	PF04466	Phage terminase large subunit
CHR48_00242	PF13333	Integrase core domain
CHR48_00242	PF00665	Integrase core domain
CHR48_00242	PF13276	HTH-like domain
CHR48_00247	PF00155	Aminotransferase class I and II
CHR48_00248	PF12822	ECF transporter, substrate-specific component
CHR48_00251	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
CHR48_00251	PF08501	Shikimate dehydrogenase substrate binding domain
CHR48_00251	PF01488	Shikimate / quinate 5-dehydrogenase
CHR48_00252	PF18152	DAHP synthase ferredoxin-like domain
CHR48_00252	PF00793	DAHP synthetase I family
CHR48_00253	PF01761	3-dehydroquinate synthase
CHR48_00254	PF01264	Chorismate synthase
CHR48_00255	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CHR48_00256	PF01202	Shikimate kinase
CHR48_00257	PF01487	Type I 3-dehydroquinase
CHR48_00260	PF02481	DNA recombination-mediator protein A
CHR48_00260	PF18255	DNA processing protein A sterile alpha motif domain
CHR48_00263	PF00005	ABC transporter
CHR48_00264	PF09819	ABC-type cobalt transport system, permease component
CHR48_00265	PF14572	Phosphoribosyl synthetase-associated domain
CHR48_00265	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CHR48_00266	PF00248	Aldo/keto reductase family
CHR48_00267	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CHR48_00267	PF00294	pfkB family carbohydrate kinase
CHR48_00270	PF01566	Natural resistance-associated macrophage protein
CHR48_00272	PF03551	Transcriptional regulator PadR-like family
CHR48_00275	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CHR48_00275	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
CHR48_00275	PF09168	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
CHR48_00277	PF01189	16S rRNA methyltransferase RsmB/F
CHR48_00277	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
CHR48_00277	PF17126	RsmF rRNA methyltransferase first C-terminal domain
CHR48_00278	PF02686	Glu-tRNAGln amidotransferase C subunit
CHR48_00279	PF01425	Amidase
CHR48_00280	PF02637	GatB domain
CHR48_00280	PF02934	GatB/GatE catalytic domain
CHR48_00281	PF00781	Diacylglycerol kinase catalytic domain
CHR48_00283	PF01297	Zinc-uptake complex component A periplasmic
CHR48_00284	PF00950	ABC 3 transport family
CHR48_00285	PF00005	ABC transporter
CHR48_00286	PF02875	Mur ligase family, glutamate ligase domain
CHR48_00286	PF08245	Mur ligase middle domain
CHR48_00287	PF01725	Ham1 family
CHR48_00288	PF08245	Mur ligase middle domain
CHR48_00288	PF02875	Mur ligase family, glutamate ligase domain
CHR48_00290	PF05746	DALR anticodon binding domain
CHR48_00290	PF00750	tRNA synthetases class I (R)
CHR48_00290	PF03485	Arginyl tRNA synthetase N terminal domain
CHR48_00291	PF00664	ABC transporter transmembrane region
CHR48_00291	PF00005	ABC transporter
CHR48_00292	PF00664	ABC transporter transmembrane region
CHR48_00292	PF00005	ABC transporter
CHR48_00294	PF02082	Transcriptional regulator
CHR48_00299	PF01316	Arginine repressor, DNA binding domain
CHR48_00299	PF02863	Arginine repressor, C-terminal domain
CHR48_00300	PF00905	Penicillin binding protein transpeptidase domain
CHR48_00300	PF00912	Transglycosylase
CHR48_00301	PF06133	Control of competence regulator ComK, YlbF/YmcA
CHR48_00304	PF13514	AAA domain
CHR48_00305	PF01966	HD domain
CHR48_00306	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CHR48_00306	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CHR48_00307	PF02447	GntP family permease
CHR48_00308	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CHR48_00308	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CHR48_00308	PF00205	Thiamine pyrophosphate enzyme, central domain
CHR48_00309	PF02447	GntP family permease
CHR48_00311	PF05193	Peptidase M16 inactive domain
CHR48_00312	PF05193	Peptidase M16 inactive domain
CHR48_00312	PF00675	Insulinase (Peptidase family M16)
CHR48_00313	PF13464	Domain of unknown function (DUF4115)
CHR48_00314	PF01066	CDP-alcohol phosphatidyltransferase
CHR48_00315	PF00994	Probable molybdopterin binding domain
CHR48_00315	PF18146	Damage-inducible protein CinA KH domain
CHR48_00315	PF02464	Competence-damaged protein
CHR48_00316	PF00154	recA bacterial DNA recombination protein
CHR48_00318	PF13538	UvrD-like helicase C-terminal domain
CHR48_00319	PF00485	Phosphoribulokinase / Uridine kinase family
CHR48_00321	PF07690	Major Facilitator Superfamily
CHR48_00323	PF00313	'Cold-shock' DNA-binding domain
CHR48_00324	PF00849	RNA pseudouridylate synthase
CHR48_00324	PF01479	S4 domain
CHR48_00327	PF02073	Thermophilic metalloprotease (M29)
CHR48_00337	PF00665	Integrase core domain
CHR48_00337	PF13276	HTH-like domain
CHR48_00337	PF13333	Integrase core domain
CHR48_00339	PF00877	NlpC/P60 family
CHR48_00342	PF00557	Metallopeptidase family M24
CHR48_00343	PF02397	Bacterial sugar transferase
CHR48_00347	PF03275	UDP-galactopyranose mutase
CHR48_00350	PF13457	GW (Gly-Tryp) dipeptide domain
CHR48_00350	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CHR48_00352	PF00535	Glycosyl transferase family 2
CHR48_00354	PF00535	Glycosyl transferase family 2
CHR48_00356	PF02324	Glycosyl hydrolase family 70
CHR48_00356	PF01473	Putative cell wall binding repeat
CHR48_00360	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
CHR48_00360	PF01628	HrcA protein C terminal domain
CHR48_00361	PF01025	GrpE
CHR48_00362	PF00012	Hsp70 protein
CHR48_00363	PF00226	DnaJ domain
CHR48_00363	PF00684	DnaJ central domain
CHR48_00363	PF01556	DnaJ C terminal domain
CHR48_00366	PF00753	Metallo-beta-lactamase superfamily
CHR48_00366	PF12706	Beta-lactamase superfamily domain
CHR48_00367	PF02272	DHHA1 domain
CHR48_00367	PF17768	RecJ OB domain
CHR48_00367	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
CHR48_00367	PF01368	DHH family
CHR48_00368	PF00156	Phosphoribosyl transferase domain
CHR48_00371	PF00717	Peptidase S24-like
CHR48_00371	PF01726	LexA DNA binding domain
CHR48_00372	PF05979	Bacterial protein of unknown function (DUF896)
CHR48_00373	PF03672	Uncharacterised protein family (UPF0154)
CHR48_00375	PF00877	NlpC/P60 family
CHR48_00376	PF00877	NlpC/P60 family
CHR48_00377	PF01553	Acyltransferase
CHR48_00378	PF05175	Methyltransferase small domain
CHR48_00379	PF01541	GIY-YIG catalytic domain
CHR48_00380	PF00318	Ribosomal protein S2
CHR48_00381	PF00889	Elongation factor TS
CHR48_00382	PF00696	Amino acid kinase family
CHR48_00383	PF01765	Ribosome recycling factor
CHR48_00385	PF13807	G-rich domain on putative tyrosine kinase
CHR48_00385	PF02706	Chain length determinant protein
CHR48_00386	PF13614	AAA domain
CHR48_00387	PF02397	Bacterial sugar transferase
CHR48_00388	PF13439	Glycosyltransferase Family 4
CHR48_00388	PF00534	Glycosyl transferases group 1
CHR48_00389	PF17101	Stealth protein CR1, conserved region 1
CHR48_00389	PF11380	Stealth protein CR2, conserved region 2
CHR48_00389	PF17102	Stealth protein CR3, conserved region 3
CHR48_00390	PF00535	Glycosyl transferase family 2
CHR48_00393	PF00535	Glycosyl transferase family 2
CHR48_00396	PF03816	Cell envelope-related transcriptional attenuator domain
CHR48_00397	PF02324	Glycosyl hydrolase family 70
CHR48_00397	PF01473	Putative cell wall binding repeat
CHR48_00399	PF00909	Ammonium Transporter Family
CHR48_00401	PF01380	SIS domain
CHR48_00402	PF02517	CPBP intramembrane metalloprotease
CHR48_00406	PF01743	Poly A polymerase head domain
CHR48_00406	PF12627	Probable RNA and SrmB- binding site of polymerase A
CHR48_00406	PF13735	tRNA nucleotidyltransferase domain 2 putative
CHR48_00407	PF12848	ABC transporter
CHR48_00407	PF16326	ABC transporter C-terminal domain
CHR48_00407	PF00005	ABC transporter
CHR48_00408	PF00186	Dihydrofolate reductase
CHR48_00410	PF02811	PHP domain
CHR48_00410	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CHR48_00410	PF01336	OB-fold nucleic acid binding domain
CHR48_00410	PF14579	Helix-hairpin-helix motif
CHR48_00410	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CHR48_00411	PF13291	ACT domain
CHR48_00411	PF04607	Region found in RelA / SpoT proteins
CHR48_00411	PF02824	TGS domain
CHR48_00412	PF02580	D-Tyr-tRNA(Tyr) deacylase
CHR48_00414	PF00999	Sodium/hydrogen exchanger family
CHR48_00416	PF17783	CvfB-like winged helix domain
CHR48_00416	PF13509	S1 domain
CHR48_00417	PF02899	Phage integrase, N-terminal SAM-like domain
CHR48_00417	PF00589	Phage integrase family
CHR48_00419	PF02616	Segregation and condensation protein ScpA
CHR48_00420	PF04079	Segregation and condensation complex subunit ScpB
CHR48_00421	PF01479	S4 domain
CHR48_00421	PF00849	RNA pseudouridylate synthase
CHR48_00422	PF06736	Protein of unknown function (DUF1211)
CHR48_00424	PF12822	ECF transporter, substrate-specific component
CHR48_00426	PF00271	Helicase conserved C-terminal domain
CHR48_00426	PF00270	DEAD/DEAH box helicase
CHR48_00428	PF02224	Cytidylate kinase
CHR48_00429	PF00575	S1 RNA binding domain
CHR48_00430	PF01926	50S ribosome-binding GTPase
CHR48_00430	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CHR48_00431	PF00216	Bacterial DNA-binding protein
CHR48_00432	PF08543	Phosphomethylpyrimidine kinase
CHR48_00433	PF07155	ECF-type riboflavin transporter, S component
CHR48_00434	PF07690	Major Facilitator Superfamily
CHR48_00435	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CHR48_00435	PF00056	lactate/malate dehydrogenase, NAD binding domain
CHR48_00436	PF00149	Calcineurin-like phosphoesterase
CHR48_00436	PF12320	Type 5 capsule protein repressor C-terminal domain
CHR48_00437	PF13476	AAA domain
CHR48_00441	PF00293	NUDIX domain
CHR48_00441	PF13344	Haloacid dehalogenase-like hydrolase
CHR48_00447	PF00011	Hsp20/alpha crystallin family
CHR48_00448	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
CHR48_00449	PF01784	NIF3 (NGG1p interacting factor 3)
CHR48_00450	PF01546	Peptidase family M20/M25/M40
CHR48_00450	PF07687	Peptidase dimerisation domain
CHR48_00451	PF00871	Acetokinase family
CHR48_00455	PF00471	Ribosomal protein L33
CHR48_00456	PF00253	Ribosomal protein S14p/S29e
CHR48_00460	PF02687	FtsX-like permease family
CHR48_00461	PF00005	ABC transporter
CHR48_00465	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_00465	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00467	PF00390	Malic enzyme, N-terminal domain
CHR48_00467	PF03949	Malic enzyme, NAD binding domain
CHR48_00468	PF03466	LysR substrate binding domain
CHR48_00468	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CHR48_00469	PF00106	short chain dehydrogenase
CHR48_00470	PF13520	Amino acid permease
CHR48_00472	PF06177	QueT transporter
CHR48_00474	PF00004	ATPase family associated with various cellular activities (AAA)
CHR48_00474	PF10431	C-terminal, D2-small domain, of ClpB protein 
CHR48_00474	PF17871	AAA lid domain
CHR48_00474	PF07724	AAA domain (Cdc48 subfamily)
CHR48_00475	PF00703	Glycosyl hydrolases family 2
CHR48_00475	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CHR48_00475	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CHR48_00476	PF02929	Beta galactosidase small chain
CHR48_00478	PF00083	Sugar (and other) transporter
CHR48_00479	PF00009	Elongation factor Tu GTP binding domain
CHR48_00479	PF06421	GTP-binding protein LepA C-terminus
CHR48_00479	PF00679	Elongation factor G C-terminus
CHR48_00481	PF13520	Amino acid permease
CHR48_00485	PF00232	Glycosyl hydrolase family 1
CHR48_00487	PF00293	NUDIX domain
CHR48_00489	PF01384	Phosphate transporter family
CHR48_00490	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_00490	PF00107	Zinc-binding dehydrogenase
CHR48_00491	PF13407	Periplasmic binding protein domain
CHR48_00491	PF00356	Bacterial regulatory proteins, lacI family
CHR48_00492	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CHR48_00493	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CHR48_00493	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CHR48_00494	PF00294	pfkB family carbohydrate kinase
CHR48_00495	PF00455	DeoR C terminal sensor domain
CHR48_00495	PF08220	DeoR-like helix-turn-helix domain
CHR48_00496	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CHR48_00497	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_00497	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00500	PF02447	GntP family permease
CHR48_00502	PF03747	ADP-ribosylglycohydrolase
CHR48_00503	PF10702	Protein of unknown function (DUF2507)
CHR48_00504	PF02390	Putative methyltransferase 
CHR48_00506	PF00005	ABC transporter
CHR48_00507	PF01230	HIT domain
CHR48_00509	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CHR48_00510	PF00854	POT family
CHR48_00511	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CHR48_00512	PF01039	Carboxyl transferase domain
CHR48_00513	PF02785	Biotin carboxylase C-terminal domain
CHR48_00513	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_00513	PF00289	Biotin carboxylase, N-terminal domain
CHR48_00515	PF02151	UvrB/uvrC motif
CHR48_00515	PF12344	Ultra-violet resistance protein B
CHR48_00515	PF17757	UvrB interaction domain
CHR48_00515	PF00271	Helicase conserved C-terminal domain
CHR48_00515	PF04851	Type III restriction enzyme, res subunit
CHR48_00519	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CHR48_00519	PF03120	NAD-dependent DNA ligase OB-fold domain
CHR48_00519	PF01653	NAD-dependent DNA ligase adenylation domain
CHR48_00519	PF00533	BRCA1 C Terminus (BRCT) domain
CHR48_00519	PF12826	Helix-hairpin-helix motif
CHR48_00520	PF13361	UvrD-like helicase C-terminal domain
CHR48_00520	PF00580	UvrD/REP helicase N-terminal domain
CHR48_00521	PF02926	THUMP domain
CHR48_00521	PF01170	Putative RNA methylase family UPF0020
CHR48_00523	PF05103	DivIVA protein
CHR48_00524	PF06908	YspA SLOG family
CHR48_00525	PF03838	Recombination protein U
CHR48_00526	PF00912	Transglycosylase
CHR48_00526	PF00905	Penicillin binding protein transpeptidase domain
CHR48_00527	PF07261	Replication initiation and membrane attachment
CHR48_00528	PF01336	OB-fold nucleic acid binding domain
CHR48_00528	PF00152	tRNA synthetases class II (D, K and N) 
CHR48_00530	PF04851	Type III restriction enzyme, res subunit
CHR48_00530	PF13307	Helicase C-terminal domain
CHR48_00530	PF00929	Exonuclease
CHR48_00531	PF08544	GHMP kinases C terminal 
CHR48_00531	PF00288	GHMP kinases N terminal domain
CHR48_00531	PF10509	Galactokinase galactose-binding signature
CHR48_00533	PF08544	GHMP kinases C terminal 
CHR48_00533	PF00288	GHMP kinases N terminal domain
CHR48_00534	PF01070	FMN-dependent dehydrogenase
CHR48_00536	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CHR48_00536	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHR48_00538	PF02096	60Kd inner membrane protein
CHR48_00541	PF13520	Amino acid permease
CHR48_00543	PF05257	CHAP domain
CHR48_00543	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CHR48_00545	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_00545	PF18719	ArlS sensor domain
CHR48_00545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_00546	PF00486	Transcriptional regulatory protein, C terminal
CHR48_00546	PF00072	Response regulator receiver domain
CHR48_00550	PF01695	IstB-like ATP binding protein
CHR48_00550	PF07319	Primosomal protein DnaI N-terminus
CHR48_00552	PF01121	Dephospho-CoA kinase
CHR48_00553	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CHR48_00553	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CHR48_00553	PF06827	Zinc finger found in FPG and IleRS
CHR48_00554	PF00476	DNA polymerase family A
CHR48_00554	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CHR48_00554	PF01367	5'-3' exonuclease, C-terminal SAM fold
CHR48_00555	PF01027	Inhibitor of apoptosis-promoting Bax1
CHR48_00556	PF02875	Mur ligase family, glutamate ligase domain
CHR48_00556	PF01225	Mur ligase family, catalytic domain
CHR48_00556	PF08245	Mur ligase middle domain
CHR48_00558	PF14794	Domain of unknown function (DUF4479)
CHR48_00558	PF01588	Putative tRNA binding domain
CHR48_00559	PF05343	M42 glutamyl aminopeptidase
CHR48_00560	PF00485	Phosphoribulokinase / Uridine kinase family
CHR48_00561	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_00561	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_00562	PF00072	Response regulator receiver domain
CHR48_00562	PF00486	Transcriptional regulatory protein, C terminal
CHR48_00563	PF02324	Glycosyl hydrolase family 70
CHR48_00563	PF01473	Putative cell wall binding repeat
CHR48_00564	PF07690	Major Facilitator Superfamily
CHR48_00568	PF04539	Sigma-70 region 3
CHR48_00568	PF04542	Sigma-70 region 2 
CHR48_00568	PF00140	Sigma-70 factor, region 1.2
CHR48_00568	PF04545	Sigma-70, region 4
CHR48_00568	PF03979	Sigma-70 factor, region 1.1
CHR48_00569	PF10410	DnaB-helicase binding domain of primase
CHR48_00569	PF01807	CHC2 zinc finger
CHR48_00569	PF08275	DNA primase catalytic core, N-terminal domain
CHR48_00570	PF01380	SIS domain
CHR48_00571	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CHR48_00573	PF07690	Major Facilitator Superfamily
CHR48_00574	PF05362	Lon protease (S16) C-terminal proteolytic domain
CHR48_00574	PF13180	PDZ domain
CHR48_00575	PF01467	Cytidylyltransferase-like
CHR48_00577	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
CHR48_00578	PF01098	Cell cycle protein
CHR48_00580	PF00459	Inositol monophosphatase family
CHR48_00581	PF05256	Uncharacterised protein family (UPF0223)
CHR48_00582	PF01327	Polypeptide deformylase
CHR48_00586	PF00753	Metallo-beta-lactamase superfamily
CHR48_00586	PF17770	Ribonuclease J C-terminal domain
CHR48_00586	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CHR48_00589	PF13419	Haloacid dehalogenase-like hydrolase
CHR48_00591	PF00781	Diacylglycerol kinase catalytic domain
CHR48_00592	PF01625	Peptide methionine sulfoxide reductase
CHR48_00593	PF03180	NLPA lipoprotein
CHR48_00594	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_00594	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00596	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00597	PF00005	ABC transporter
CHR48_00597	PF00571	CBS domain
CHR48_00600	PF01368	DHH family
CHR48_00600	PF02833	DHHA2 domain
CHR48_00601	PF02660	Glycerol-3-phosphate acyltransferase
CHR48_00602	PF01263	Aldose 1-epimerase
CHR48_00603	PF02899	Phage integrase, N-terminal SAM-like domain
CHR48_00603	PF00589	Phage integrase family
CHR48_00604	PF01751	Toprim domain
CHR48_00604	PF01396	Topoisomerase DNA binding C4 zinc finger
CHR48_00604	PF01131	DNA topoisomerase
CHR48_00605	PF18255	DNA processing protein A sterile alpha motif domain
CHR48_00605	PF02481	DNA recombination-mediator protein A
CHR48_00606	PF01351	Ribonuclease HII
CHR48_00607	PF01926	50S ribosome-binding GTPase
CHR48_00608	PF06855	YozE SAM-like fold
CHR48_00610	PF13472	GDSL-like Lipase/Acylhydrolase family
CHR48_00611	PF02645	Uncharacterised protein, DegV family COG1307
CHR48_00612	PF02645	Uncharacterised protein, DegV family COG1307
CHR48_00613	PF11700	Vacuole effluxer Atg22 like
CHR48_00616	PF03932	CutC family
CHR48_00618	PF06574	FAD synthetase
CHR48_00618	PF01687	Riboflavin kinase
CHR48_00620	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00621	PF16198	tRNA pseudouridylate synthase B C-terminal domain
CHR48_00621	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CHR48_00622	PF02033	Ribosome-binding factor A
CHR48_00623	PF00009	Elongation factor Tu GTP binding domain
CHR48_00623	PF11987	Translation-initiation factor 2
CHR48_00623	PF04760	Translation initiation factor IF-2, N-terminal region
CHR48_00624	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
CHR48_00625	PF04296	Protein of unknown function (DUF448)
CHR48_00626	PF00575	S1 RNA binding domain
CHR48_00626	PF08529	NusA N-terminal domain
CHR48_00626	PF13184	NusA-like KH domain
CHR48_00627	PF17384	RimP C-terminal SH3 domain
CHR48_00627	PF02576	RimP N-terminal domain
CHR48_00630	PF01070	FMN-dependent dehydrogenase
CHR48_00637	PF01264	Chorismate synthase
CHR48_00638	PF07690	Major Facilitator Superfamily
CHR48_00639	PF01202	Shikimate kinase
CHR48_00640	PF02153	Prephenate dehydrogenase
CHR48_00640	PF01842	ACT domain
CHR48_00641	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CHR48_00642	PF12822	ECF transporter, substrate-specific component
CHR48_00643	PF00251	Glycosyl hydrolases family 32 N-terminal domain
CHR48_00643	PF08244	Glycosyl hydrolases family 32 C terminal
CHR48_00644	PF02378	Phosphotransferase system, EIIC 
CHR48_00644	PF00367	phosphotransferase system, EIIB
CHR48_00644	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CHR48_00645	PF02567	Phenazine biosynthesis-like protein
CHR48_00652	PF01545	Cation efflux family
CHR48_00652	PF16916	Dimerisation domain of Zinc Transporter
CHR48_00655	PF13673	Acetyltransferase (GNAT) domain
CHR48_00656	PF01047	MarR family
CHR48_00658	PF02627	Carboxymuconolactone decarboxylase family
CHR48_00659	PF00248	Aldo/keto reductase family
CHR48_00661	PF03466	LysR substrate binding domain
CHR48_00661	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CHR48_00668	PF00005	ABC transporter
CHR48_00668	PF12848	ABC transporter
CHR48_00672	PF01987	Mitochondrial biogenesis AIM24
CHR48_00673	PF07690	Major Facilitator Superfamily
CHR48_00674	PF03448	MgtE intracellular N domain
CHR48_00674	PF00571	CBS domain
CHR48_00674	PF01769	Divalent cation transporter
CHR48_00675	PF00849	RNA pseudouridylate synthase
CHR48_00676	PF01513	ATP-NAD kinase
CHR48_00677	PF04607	Region found in RelA / SpoT proteins
CHR48_00680	PF01725	Ham1 family
CHR48_00681	PF01177	Asp/Glu/Hydantoin racemase
CHR48_00682	PF13419	Haloacid dehalogenase-like hydrolase
CHR48_00698	PF00480	ROK family
CHR48_00700	PF00106	short chain dehydrogenase
CHR48_00705	PF02581	Thiamine monophosphate synthase
CHR48_00706	PF08543	Phosphomethylpyrimidine kinase
CHR48_00707	PF02110	Hydroxyethylthiazole kinase family
CHR48_00710	PF03180	NLPA lipoprotein
CHR48_00711	PF03180	NLPA lipoprotein
CHR48_00712	PF00056	lactate/malate dehydrogenase, NAD binding domain
CHR48_00712	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CHR48_00713	PF00155	Aminotransferase class I and II
CHR48_00714	PF01565	FAD binding domain 
CHR48_00714	PF02913	FAD linked oxidases, C-terminal domain
CHR48_00717	PF00465	Iron-containing alcohol dehydrogenase 
CHR48_00719	PF13333	Integrase core domain
CHR48_00719	PF00665	Integrase core domain
CHR48_00719	PF13276	HTH-like domain
CHR48_00728	PF13276	HTH-like domain
CHR48_00728	PF13333	Integrase core domain
CHR48_00728	PF00665	Integrase core domain
CHR48_00729	PF07669	Eco57I restriction-modification methylase
CHR48_00732	PF14765	Polyketide synthase dehydratase
CHR48_00732	PF00550	Phosphopantetheine attachment site
CHR48_00732	PF08659	KR domain
CHR48_00732	PF02801	Beta-ketoacyl synthase, C-terminal domain
CHR48_00732	PF00109	Beta-ketoacyl synthase, N-terminal domain
CHR48_00732	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_00732	PF00698	Acyl transferase domain
CHR48_00732	PF16197	Ketoacyl-synthetase C-terminal extension
CHR48_00734	PF17941	Polyphosphate kinase C-terminal domain 1
CHR48_00734	PF13089	Polyphosphate kinase N-terminal domain
CHR48_00734	PF13090	Polyphosphate kinase C-terminal domain 2
CHR48_00734	PF02503	Polyphosphate kinase middle domain
CHR48_00744	PF04973	Nicotinamide mononucleotide transporter
CHR48_00745	PF02698	DUF218 domain
CHR48_00749	PF05970	PIF1-like helicase
CHR48_00749	PF02689	Helicase
CHR48_00752	PF07687	Peptidase dimerisation domain
CHR48_00752	PF01546	Peptidase family M20/M25/M40
CHR48_00754	PF03306	Alpha-acetolactate decarboxylase
CHR48_00755	PF00521	DNA gyrase/topoisomerase IV, subunit A
CHR48_00755	PF03989	DNA gyrase C-terminal domain, beta-propeller
CHR48_00756	PF01751	Toprim domain
CHR48_00756	PF00204	DNA gyrase B
CHR48_00756	PF00986	DNA gyrase B subunit, carboxyl terminus
CHR48_00756	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_00757	PF00085	Thioredoxin
CHR48_00761	PF01713	Smr domain
CHR48_00761	PF00488	MutS domain V
CHR48_00765	PF01926	50S ribosome-binding GTPase
CHR48_00766	PF10431	C-terminal, D2-small domain, of ClpB protein 
CHR48_00766	PF07724	AAA domain (Cdc48 subfamily)
CHR48_00766	PF06689	ClpX C4-type zinc finger
CHR48_00767	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CHR48_00767	PF05697	Bacterial trigger factor protein (TF)
CHR48_00767	PF05698	Bacterial trigger factor protein (TF) C-terminus
CHR48_00769	PF03143	Elongation factor Tu C-terminal domain
CHR48_00769	PF00009	Elongation factor Tu GTP binding domain
CHR48_00769	PF03144	Elongation factor Tu domain 2
CHR48_00771	PF00753	Metallo-beta-lactamase superfamily
CHR48_00771	PF17770	Ribonuclease J C-terminal domain
CHR48_00771	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CHR48_00772	PF01649	Ribosomal protein S20
CHR48_00773	PF00312	Ribosomal protein S15
CHR48_00774	PF06144	DNA polymerase III, delta subunit
CHR48_00775	PF00753	Metallo-beta-lactamase superfamily
CHR48_00775	PF03772	Competence protein
CHR48_00777	PF06949	Protein of unknown function (DUF1292)
CHR48_00778	PF06949	Protein of unknown function (DUF1292)
CHR48_00779	PF03652	Holliday junction resolvase
CHR48_00780	PF06135	IreB regulatory phosphoprotein
CHR48_00781	PF01411	tRNA synthetases class II (A)
CHR48_00781	PF02272	DHHA1 domain
CHR48_00781	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CHR48_00782	PF02595	Glycerate kinase family
CHR48_00784	PF00271	Helicase conserved C-terminal domain
CHR48_00784	PF00270	DEAD/DEAH box helicase
CHR48_00785	PF01368	DHH family
CHR48_00785	PF02272	DHHA1 domain
CHR48_00786	PF00817	impB/mucB/samB family
CHR48_00786	PF11799	impB/mucB/samB family C-terminal domain
CHR48_00787	PF02699	Preprotein translocase subunit
CHR48_00788	PF01702	Queuine tRNA-ribosyltransferase
CHR48_00795	PF02547	Queuosine biosynthesis protein
CHR48_00796	PF17864	RuvB AAA lid domain
CHR48_00796	PF05491	RuvB C-terminal winged helix domain
CHR48_00796	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CHR48_00797	PF07499	RuvA, C-terminal domain
CHR48_00797	PF01330	RuvA N terminal domain
CHR48_00800	PF00571	CBS domain
CHR48_00800	PF00478	IMP dehydrogenase / GMP reductase domain
CHR48_00801	PF00478	IMP dehydrogenase / GMP reductase domain
CHR48_00801	PF00571	CBS domain
CHR48_00802	PF07690	Major Facilitator Superfamily
CHR48_00804	PF09186	Domain of unknown function (DUF1949)
CHR48_00804	PF01205	Uncharacterized protein family UPF0029
CHR48_00805	PF01018	GTP1/OBG
CHR48_00805	PF09269	Domain of unknown function (DUF1967)
CHR48_00805	PF01926	50S ribosome-binding GTPase
CHR48_00806	PF02151	UvrB/uvrC motif
CHR48_00806	PF01541	GIY-YIG catalytic domain
CHR48_00806	PF08459	UvrC Helix-hairpin-helix N-terminal
CHR48_00810	PF00005	ABC transporter
CHR48_00810	PF13732	Domain of unknown function (DUF4162)
CHR48_00812	PF09397	Ftsk gamma domain
CHR48_00812	PF17854	FtsK alpha domain
CHR48_00812	PF01580	FtsK/SpoIIIE family
CHR48_00813	PF00588	SpoU rRNA Methylase family
CHR48_00814	PF01594	AI-2E family transporter
CHR48_00815	PF10282	Lactonase, 7-bladed beta-propeller
CHR48_00816	PF01042	Endoribonuclease L-PSP
CHR48_00817	PF03741	Integral membrane protein TerC family
CHR48_00819	PF02092	Glycyl-tRNA synthetase beta subunit
CHR48_00820	PF02091	Glycyl-tRNA synthetase alpha subunit
CHR48_00823	PF02565	Recombination protein O C terminal
CHR48_00823	PF11967	Recombination protein O N terminal
CHR48_00824	PF07650	KH domain
CHR48_00824	PF01926	50S ribosome-binding GTPase
CHR48_00825	PF01219	Prokaryotic diacylglycerol kinase
CHR48_00826	PF02130	Uncharacterized protein family UPF0054
CHR48_00827	PF02562	PhoH-like protein
CHR48_00828	PF09424	Yqey-like protein
CHR48_00829	PF01165	Ribosomal protein S21
CHR48_00830	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CHR48_00830	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHR48_00832	PF01336	OB-fold nucleic acid binding domain
CHR48_00832	PF00152	tRNA synthetases class II (D, K and N) 
CHR48_00832	PF02938	GAD domain
CHR48_00833	PF03129	Anticodon binding domain
CHR48_00833	PF13393	Histidyl-tRNA synthetase
CHR48_00834	PF01520	N-acetylmuramoyl-L-alanine amidase
CHR48_00834	PF08239	Bacterial SH3 domain
CHR48_00837	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CHR48_00837	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CHR48_00838	PF02441	Flavoprotein
CHR48_00838	PF04127	DNA / pantothenate metabolism flavoprotein
CHR48_00852	PF01321	Creatinase/Prolidase N-terminal domain
CHR48_00852	PF00557	Metallopeptidase family M24
CHR48_00853	PF00356	Bacterial regulatory proteins, lacI family
CHR48_00856	PF00230	Major intrinsic protein
CHR48_00857	PF08439	Oligopeptidase F
CHR48_00857	PF01432	Peptidase family M3
CHR48_00859	PF02378	Phosphotransferase system, EIIC 
CHR48_00860	PF00232	Glycosyl hydrolase family 1
CHR48_00861	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CHR48_00862	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CHR48_00863	PF00232	Glycosyl hydrolase family 1
CHR48_00864	PF05389	Negative regulator of genetic competence (MecA)
CHR48_00865	PF03960	ArsC family
CHR48_00866	PF05816	Toxic anion resistance protein (TelA)
CHR48_00880	PF01741	Large-conductance mechanosensitive channel, MscL
CHR48_00881	PF01712	Deoxynucleoside kinase
CHR48_00882	PF00877	NlpC/P60 family
CHR48_00883	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CHR48_00883	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CHR48_00884	PF01361	Tautomerase enzyme
CHR48_00885	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHR48_00885	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CHR48_00886	PF00375	Sodium:dicarboxylate symporter family
CHR48_00887	PF01245	Ribosomal protein L19
CHR48_00888	PF01746	tRNA (Guanine-1)-methyltransferase
CHR48_00889	PF05239	PRC-barrel domain
CHR48_00889	PF01782	RimM N-terminal domain
CHR48_00890	PF00300	Histidine phosphatase superfamily (branch 1)
CHR48_00893	PF03741	Integral membrane protein TerC family
CHR48_00894	PF00886	Ribosomal protein S16
CHR48_00898	PF02978	Signal peptide binding domain
CHR48_00898	PF00448	SRP54-type protein, GTPase domain
CHR48_00898	PF02881	SRP54-type protein, helical bundle domain
CHR48_00899	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
CHR48_00900	PF00448	SRP54-type protein, GTPase domain
CHR48_00900	PF02881	SRP54-type protein, helical bundle domain
CHR48_00901	PF06470	SMC proteins Flexible Hinge Domain
CHR48_00901	PF02463	RecF/RecN/SMC N terminal domain
CHR48_00902	PF14622	Ribonuclease-III-like
CHR48_00902	PF00035	Double-stranded RNA binding motif
CHR48_00903	PF00550	Phosphopantetheine attachment site
CHR48_00904	PF02504	Fatty acid synthesis protein
CHR48_00905	PF17191	RecG wedge domain
CHR48_00905	PF00271	Helicase conserved C-terminal domain
CHR48_00905	PF00270	DEAD/DEAH box helicase
CHR48_00907	PF13439	Glycosyltransferase Family 4
CHR48_00910	PF02734	DAK2 domain
CHR48_00910	PF13684	Dihydroxyacetone kinase family
CHR48_00911	PF03780	Asp23 family, cell envelope-related function
CHR48_00912	PF00830	Ribosomal L28 family
CHR48_00914	PF00834	Ribulose-phosphate 3 epimerase family
CHR48_00915	PF16745	RsgA N-terminal domain
CHR48_00915	PF03193	RsgA GTPase
CHR48_00916	PF03793	PASTA domain
CHR48_00916	PF00069	Protein kinase domain
CHR48_00918	PF01029	NusB family
CHR48_00918	PF01189	16S rRNA methyltransferase RsmB/F
CHR48_00919	PF00551	Formyl transferase
CHR48_00919	PF02911	Formyl transferase, C-terminal domain
CHR48_00920	PF17764	3′ DNA-binding domain (3′BD)
CHR48_00920	PF18074	Primosomal protein N C-terminal domain
CHR48_00920	PF04851	Type III restriction enzyme, res subunit
CHR48_00920	PF00271	Helicase conserved C-terminal domain
CHR48_00920	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
CHR48_00921	PF00871	Acetokinase family
CHR48_00927	PF08334	Type II secretion system (T2SS), protein G
CHR48_00927	PF07963	Prokaryotic N-terminal methylation motif
CHR48_00929	PF00437	Type II/IV secretion system protein
CHR48_00930	PF00860	Permease family
CHR48_00931	PF01709	Transcriptional regulator
CHR48_00932	PF13538	UvrD-like helicase C-terminal domain
CHR48_00932	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
CHR48_00932	PF14490	Helix-hairpin-helix containing domain
CHR48_00935	PF08264	Anticodon-binding domain of tRNA
CHR48_00935	PF00133	tRNA synthetases class I (I, L, M and V)
CHR48_00935	PF06827	Zinc finger found in FPG and IleRS
CHR48_00936	PF05103	DivIVA protein
CHR48_00939	PF04472	Cell division protein SepF
CHR48_00940	PF12327	FtsZ family, C-terminal domain
CHR48_00940	PF00091	Tubulin/FtsZ family, GTPase domain
CHR48_00941	PF02491	SHS2 domain inserted in FTSA
CHR48_00941	PF11983	Membrane-attachment and polymerisation-promoting switch
CHR48_00942	PF03799	Cell division protein FtsQ
CHR48_00942	PF08478	POTRA domain, FtsQ-type
CHR48_00943	PF03033	Glycosyltransferase family 28 N-terminal domain
CHR48_00943	PF04101	Glycosyltransferase family 28 C-terminal domain
CHR48_00944	PF02875	Mur ligase family, glutamate ligase domain
CHR48_00944	PF08245	Mur ligase middle domain
CHR48_00945	PF00953	Glycosyl transferase family 4
CHR48_00945	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
CHR48_00947	PF04977	Septum formation initiator
CHR48_00948	PF01795	MraW methylase family
CHR48_00949	PF02381	MraZ protein, putative antitoxin-like
CHR48_00951	PF04452	RNA methyltransferase
CHR48_00953	PF00391	PEP-utilising enzyme, mobile domain
CHR48_00953	PF00224	Pyruvate kinase, barrel domain
CHR48_00953	PF02887	Pyruvate kinase, alpha/beta domain
CHR48_00954	PF00324	Amino acid permease
CHR48_00957	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_00957	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_00960	PF01268	Formate--tetrahydrofolate ligase
CHR48_00961	PF02843	Phosphoribosylglycinamide synthetase, C domain
CHR48_00961	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CHR48_00961	PF02844	Phosphoribosylglycinamide synthetase, N domain
CHR48_00962	PF01808	AICARFT/IMPCHase bienzyme
CHR48_00962	PF02142	MGS-like domain
CHR48_00963	PF00551	Formyl transferase
CHR48_00964	PF00586	AIR synthase related protein, N-terminal domain
CHR48_00964	PF02769	AIR synthase related protein, C-terminal domain
CHR48_00965	PF13537	Glutamine amidotransferase domain
CHR48_00965	PF00156	Phosphoribosyl transferase domain
CHR48_00966	PF00586	AIR synthase related protein, N-terminal domain
CHR48_00966	PF02769	AIR synthase related protein, C-terminal domain
CHR48_00966	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
CHR48_00969	PF01259	SAICAR synthetase
CHR48_00970	PF02222	ATP-grasp domain
CHR48_00970	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
CHR48_00971	PF00731	AIR carboxylase
CHR48_00974	PF00005	ABC transporter
CHR48_00975	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_00977	PF00194	Eukaryotic-type carbonic anhydrase
CHR48_00978	PF04085	rod shape-determining protein MreC
CHR48_00980	PF04002	RadC-like JAB domain
CHR48_00983	PF02378	Phosphotransferase system, EIIC 
CHR48_00983	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CHR48_00983	PF00367	phosphotransferase system, EIIB
CHR48_00984	PF02645	Uncharacterised protein, DegV family COG1307
CHR48_00985	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CHR48_00986	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CHR48_00987	PF00654	Voltage gated chloride channel
CHR48_00988	PF00005	ABC transporter
CHR48_00989	PF02653	Branched-chain amino acid transport system / permease component
CHR48_00991	PF00268	Ribonucleotide reductase, small chain
CHR48_00992	PF08343	Ribonucleotide reductase N-terminal
CHR48_00992	PF02867	Ribonucleotide reductase, barrel domain
CHR48_00992	PF00317	Ribonucleotide reductase, all-alpha domain
CHR48_00993	PF00462	Glutaredoxin
CHR48_00994	PF07972	NrdI Flavodoxin like 
CHR48_00999	PF01738	Dienelactone hydrolase family
CHR48_01000	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CHR48_01001	PF01048	Phosphorylase superfamily
CHR48_01003	PF00293	NUDIX domain
CHR48_01004	PF00313	'Cold-shock' DNA-binding domain
CHR48_01007	PF02222	ATP-grasp domain
CHR48_01008	PF01476	LysM domain
CHR48_01008	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CHR48_01009	PF00005	ABC transporter
CHR48_01009	PF00664	ABC transporter transmembrane region
CHR48_01010	PF00664	ABC transporter transmembrane region
CHR48_01010	PF00005	ABC transporter
CHR48_01011	PF02322	Cytochrome bd terminal oxidase subunit II
CHR48_01012	PF01654	Cytochrome bd terminal oxidase subunit I
CHR48_01013	PF12822	ECF transporter, substrate-specific component
CHR48_01037	PF00575	S1 RNA binding domain
CHR48_01038	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CHR48_01039	PF09335	SNARE associated Golgi protein
CHR48_01040	PF01192	RNA polymerase Rpb6 
CHR48_01041	PF00625	Guanylate kinase
CHR48_01043	PF13476	AAA domain
CHR48_01044	PF01316	Arginine repressor, DNA binding domain
CHR48_01044	PF02863	Arginine repressor, C-terminal domain
CHR48_01045	PF01728	FtsJ-like methyltransferase
CHR48_01045	PF01479	S4 domain
CHR48_01046	PF00348	Polyprenyl synthetase
CHR48_01047	PF02609	Exonuclease VII small subunit
CHR48_01048	PF02601	Exonuclease VII, large subunit
CHR48_01048	PF13742	OB-fold nucleic acid binding domain
CHR48_01049	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CHR48_01049	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CHR48_01050	PF07155	ECF-type riboflavin transporter, S component
CHR48_01053	PF00005	ABC transporter
CHR48_01054	PF12704	MacB-like periplasmic core domain
CHR48_01054	PF02687	FtsX-like permease family
CHR48_01056	PF00216	Bacterial DNA-binding protein
CHR48_01057	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CHR48_01059	PF03129	Anticodon binding domain
CHR48_01059	PF02824	TGS domain
CHR48_01059	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CHR48_01059	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CHR48_01079	PF01119	DNA mismatch repair protein, C-terminal domain
CHR48_01079	PF08676	MutL C terminal dimerisation domain
CHR48_01080	PF05192	MutS domain III
CHR48_01080	PF01624	MutS domain I
CHR48_01080	PF05188	MutS domain II
CHR48_01080	PF00488	MutS domain V
CHR48_01080	PF05190	MutS family domain IV
CHR48_01082	PF05636	HIGH Nucleotidyl Transferase
CHR48_01083	PF13649	Methyltransferase domain
CHR48_01085	PF01966	HD domain
CHR48_01086	PF01467	Cytidylyltransferase-like
CHR48_01088	PF01926	50S ribosome-binding GTPase
CHR48_01090	PF01820	D-ala D-ala ligase N-terminus
CHR48_01090	PF07478	D-ala D-ala ligase C-terminus
CHR48_01092	PF13520	Amino acid permease
CHR48_01093	PF00118	TCP-1/cpn60 chaperonin family
CHR48_01094	PF00166	Chaperonin 10 Kd subunit
CHR48_01095	PF00005	ABC transporter
CHR48_01095	PF16326	ABC transporter C-terminal domain
CHR48_01095	PF12848	ABC transporter
CHR48_01098	PF13439	Glycosyltransferase Family 4
CHR48_01098	PF00534	Glycosyl transferases group 1
CHR48_01099	PF08245	Mur ligase middle domain
CHR48_01099	PF02875	Mur ligase family, glutamate ligase domain
CHR48_01101	PF10458	Valyl tRNA synthetase tRNA binding arm
CHR48_01101	PF08264	Anticodon-binding domain of tRNA
CHR48_01101	PF00133	tRNA synthetases class I (I, L, M and V)
CHR48_01108	PF03006	Haemolysin-III related
CHR48_01128	PF00582	Universal stress protein family
CHR48_01130	PF16193	AAA C-terminal domain
CHR48_01130	PF12002	MgsA AAA+ ATPase C terminal
CHR48_01130	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CHR48_01132	PF07997	Protein of unknown function (DUF1694)
CHR48_01134	PF00009	Elongation factor Tu GTP binding domain
CHR48_01134	PF16658	Class II release factor RF3, C-terminal domain
CHR48_01134	PF03144	Elongation factor Tu domain 2
CHR48_01136	PF04167	Protein of unknown function (DUF402)
CHR48_01139	PF02631	RecX family
CHR48_01140	PF01895	PhoU domain
CHR48_01141	PF00005	ABC transporter
CHR48_01142	PF00005	ABC transporter
CHR48_01143	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01144	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01145	PF12849	PBP superfamily domain
CHR48_01148	PF01156	Inosine-uridine preferring nucleoside hydrolase
CHR48_01149	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CHR48_01149	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CHR48_01150	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_01151	PF13344	Haloacid dehalogenase-like hydrolase
CHR48_01152	PF06265	Protein of unknown function (DUF1027)
CHR48_01153	PF02872	5'-nucleotidase, C-terminal domain
CHR48_01156	PF00557	Metallopeptidase family M24
CHR48_01156	PF01321	Creatinase/Prolidase N-terminal domain
CHR48_01157	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CHR48_01157	PF13378	Enolase C-terminal domain-like
CHR48_01158	PF00561	alpha/beta hydrolase fold
CHR48_01159	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CHR48_01159	PF16582	Middle domain of thiamine pyrophosphate
CHR48_01159	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CHR48_01162	PF00881	Nitroreductase family
CHR48_01163	PF00005	ABC transporter
CHR48_01163	PF00664	ABC transporter transmembrane region
CHR48_01165	PF07691	PA14 domain
CHR48_01165	PF01915	Glycosyl hydrolase family 3 C-terminal domain
CHR48_01165	PF00933	Glycosyl hydrolase family 3 N terminal domain
CHR48_01165	PF14310	Fibronectin type III-like domain
CHR48_01166	PF01016	Ribosomal L27 protein
CHR48_01167	PF00829	Ribosomal prokaryotic L21 protein
CHR48_01172	PF03951	Glutamine synthetase, beta-Grasp domain
CHR48_01172	PF00120	Glutamine synthetase, catalytic domain
CHR48_01173	PF13411	MerR HTH family regulatory protein
CHR48_01175	PF03009	Glycerophosphoryl diester phosphodiesterase family
CHR48_01179	PF05257	CHAP domain
CHR48_01180	PF01471	Putative peptidoglycan binding domain
CHR48_01180	PF01510	N-acetylmuramoyl-L-alanine amidase
CHR48_01180	PF01476	LysM domain
CHR48_01181	PF00480	ROK family
CHR48_01184	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CHR48_01185	PF03717	Penicillin-binding Protein dimerisation domain
CHR48_01185	PF00905	Penicillin binding protein transpeptidase domain
CHR48_01187	PF01272	Transcription elongation factor, GreA/GreB, C-term
CHR48_01187	PF03449	Transcription elongation factor, N-terminal
CHR48_01188	PF00270	DEAD/DEAH box helicase
CHR48_01188	PF00570	HRDC domain
CHR48_01188	PF00271	Helicase conserved C-terminal domain
CHR48_01188	PF16124	RecQ zinc-binding
CHR48_01188	PF09382	RQC domain
CHR48_01189	PF02618	YceG-like family
CHR48_01190	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
CHR48_01190	PF03484	tRNA synthetase B5 domain
CHR48_01190	PF01588	Putative tRNA binding domain
CHR48_01190	PF03483	B3/4 domain
CHR48_01190	PF03147	Ferredoxin-fold anticodon binding domain
CHR48_01191	PF01409	tRNA synthetases class II core domain (F)
CHR48_01191	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CHR48_01192	PF01638	HxlR-like helix-turn-helix
CHR48_01194	PF00588	SpoU rRNA Methylase family
CHR48_01194	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CHR48_01195	PF02388	FemAB family
CHR48_01198	PF00472	RF-1 domain
CHR48_01198	PF03462	PCRF domain
CHR48_01199	PF07516	SecA Wing and Scaffold domain
CHR48_01199	PF01043	SecA preprotein cross-linking domain
CHR48_01199	PF07517	SecA DEAD-like domain
CHR48_01200	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CHR48_01202	PF18073	Rubredoxin metal binding domain
CHR48_01203	PF00692	dUTPase
CHR48_01205	PF00877	NlpC/P60 family
CHR48_01206	PF05257	CHAP domain
CHR48_01206	PF01476	LysM domain
CHR48_01207	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_01207	PF00107	Zinc-binding dehydrogenase
CHR48_01208	PF03306	Alpha-acetolactate decarboxylase
CHR48_01209	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CHR48_01209	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CHR48_01209	PF00205	Thiamine pyrophosphate enzyme, central domain
CHR48_01210	PF00056	lactate/malate dehydrogenase, NAD binding domain
CHR48_01210	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CHR48_01214	PF01566	Natural resistance-associated macrophage protein
CHR48_01215	PF01783	Ribosomal L32p protein family
CHR48_01216	PF02378	Phosphotransferase system, EIIC 
CHR48_01216	PF00367	phosphotransferase system, EIIB
CHR48_01218	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CHR48_01218	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CHR48_01219	PF00574	Clp protease
CHR48_01220	PF02650	WhiA C-terminal HTH domain
CHR48_01220	PF14527	WhiA LAGLIDADG-like domain
CHR48_01220	PF10298	WhiA N-terminal LAGLIDADG-like domain
CHR48_01221	PF01933	Uncharacterised protein family UPF0052
CHR48_01222	PF03668	P-loop ATPase protein family
CHR48_01224	PF17755	UvrA DNA-binding domain
CHR48_01224	PF00005	ABC transporter
CHR48_01224	PF17760	UvrA interaction domain
CHR48_01225	PF07690	Major Facilitator Superfamily
CHR48_01227	PF01569	PAP2 superfamily
CHR48_01231	PF00248	Aldo/keto reductase family
CHR48_01233	PF03167	Uracil DNA glycosylase superfamily
CHR48_01236	PF00205	Thiamine pyrophosphate enzyme, central domain
CHR48_01236	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CHR48_01236	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CHR48_01237	PF00144	Beta-lactamase
CHR48_01239	PF00106	short chain dehydrogenase
CHR48_01240	PF00380	Ribosomal protein S9/S16
CHR48_01241	PF00572	Ribosomal protein L13
CHR48_01242	PF01416	tRNA pseudouridine synthase
CHR48_01243	PF02361	Cobalt transport protein
CHR48_01244	PF00005	ABC transporter
CHR48_01245	PF00005	ABC transporter
CHR48_01247	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01248	PF01297	Zinc-uptake complex component A periplasmic
CHR48_01249	PF00950	ABC 3 transport family
CHR48_01250	PF00005	ABC transporter
CHR48_01252	PF16320	Ribosomal protein L7/L12 dimerisation domain
CHR48_01252	PF00542	Ribosomal protein L7/L12 C-terminal domain
CHR48_01253	PF00466	Ribosomal protein L10
CHR48_01254	PF00687	Ribosomal protein L1p/L10e family
CHR48_01255	PF00298	Ribosomal protein L11, RNA binding domain
CHR48_01255	PF03946	Ribosomal protein L11, N-terminal domain
CHR48_01256	PF02357	Transcription termination factor nusG
CHR48_01256	PF00467	KOW motif
CHR48_01257	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CHR48_01258	PF00471	Ribosomal protein L33
CHR48_01260	PF00588	SpoU rRNA Methylase family
CHR48_01260	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CHR48_01261	PF00636	Ribonuclease III domain
CHR48_01262	PF02664	S-Ribosylhomocysteinase (LuxS)
CHR48_01263	PF03180	NLPA lipoprotein
CHR48_01264	PF01717	Cobalamin-independent synthase, Catalytic domain
CHR48_01265	PF01053	Cys/Met metabolism PLP-dependent enzyme
CHR48_01266	PF01406	tRNA synthetases class I (C) catalytic domain
CHR48_01266	PF09190	DALR domain
CHR48_01267	PF00682	HMGL-like
CHR48_01267	PF02436	Conserved carboxylase domain
CHR48_01267	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_01267	PF00364	Biotin-requiring enzyme
CHR48_01267	PF00289	Biotin carboxylase, N-terminal domain
CHR48_01267	PF02785	Biotin carboxylase C-terminal domain
CHR48_01268	PF00056	lactate/malate dehydrogenase, NAD binding domain
CHR48_01268	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CHR48_01269	PF00939	Sodium:sulfate symporter transmembrane region
CHR48_01270	PF14537	Cytochrome c3
CHR48_01270	PF00890	FAD binding domain
CHR48_01271	PF10415	Fumarase C C-terminus
CHR48_01271	PF00206	Lyase
CHR48_01272	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CHR48_01272	PF03466	LysR substrate binding domain
CHR48_01274	PF02424	ApbE family
CHR48_01275	PF03358	NADPH-dependent FMN reductase
CHR48_01275	PF00890	FAD binding domain
CHR48_01275	PF04205	FMN-binding domain
CHR48_01276	PF02540	NAD synthase
CHR48_01277	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
CHR48_01277	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CHR48_01277	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
CHR48_01279	PF03180	NLPA lipoprotein
CHR48_01280	PF09383	NIL domain
CHR48_01280	PF00005	ABC transporter
CHR48_01281	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01285	PF01196	Ribosomal protein L17
CHR48_01286	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CHR48_01286	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CHR48_01286	PF01000	RNA polymerase Rpb3/RpoA insert domain
CHR48_01287	PF00411	Ribosomal protein S11
CHR48_01288	PF00416	Ribosomal protein S13/S18
CHR48_01289	PF00444	Ribosomal protein L36
CHR48_01290	PF01176	Translation initiation factor 1A / IF-1
CHR48_01291	PF05191	Adenylate kinase, active site lid
CHR48_01292	PF00344	SecY translocase
CHR48_01293	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CHR48_01294	PF00327	Ribosomal protein L30p/L7e
CHR48_01295	PF03719	Ribosomal protein S5, C-terminal domain
CHR48_01295	PF00333	Ribosomal protein S5, N-terminal domain
CHR48_01296	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
CHR48_01297	PF00347	Ribosomal protein L6
CHR48_01298	PF00410	Ribosomal protein S8
CHR48_01299	PF00673	ribosomal L5P family C-terminus
CHR48_01299	PF00281	Ribosomal protein L5
CHR48_01300	PF00467	KOW motif
CHR48_01300	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
CHR48_01301	PF00238	Ribosomal protein L14p/L23e
CHR48_01302	PF00366	Ribosomal protein S17
CHR48_01303	PF00831	Ribosomal L29 protein
CHR48_01304	PF00252	Ribosomal protein L16p/L10e
CHR48_01305	PF07650	KH domain
CHR48_01305	PF00189	Ribosomal protein S3, C-terminal domain
CHR48_01306	PF00237	Ribosomal protein L22p/L17e
CHR48_01307	PF00203	Ribosomal protein S19
CHR48_01308	PF03947	Ribosomal Proteins L2, C-terminal domain
CHR48_01308	PF00181	Ribosomal Proteins L2, RNA binding domain
CHR48_01309	PF00276	Ribosomal protein L23
CHR48_01310	PF00573	Ribosomal protein L4/L1 family
CHR48_01311	PF00297	Ribosomal protein L3
CHR48_01312	PF00338	Ribosomal protein S10p/S20e
CHR48_01313	PF00348	Polyprenyl synthetase
CHR48_01314	PF00814	Glycoprotease family
CHR48_01316	PF00583	Acetyltransferase (GNAT) family
CHR48_01317	PF00814	Glycoprotease family
CHR48_01318	PF16363	GDP-mannose 4,6 dehydratase
CHR48_01320	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CHR48_01322	PF06153	Cyclic-di-AMP receptor
CHR48_01323	PF02223	Thymidylate kinase
CHR48_01326	PF13662	Toprim domain
CHR48_01326	PF02132	RecR protein
CHR48_01327	PF02575	YbaB/EbfC DNA-binding family
CHR48_01328	PF12169	DNA polymerase III subunits gamma and tau domain III
CHR48_01329	PF14437	MafB19-like deaminase
CHR48_01330	PF05175	Methyltransferase small domain
CHR48_01331	PF03641	Possible lysine decarboxylase
CHR48_01332	PF07690	Major Facilitator Superfamily
CHR48_01334	PF01381	Helix-turn-helix
CHR48_01343	PF08241	Methyltransferase domain
CHR48_01344	PF08359	YsiA-like protein, C-terminal region
CHR48_01344	PF00440	Bacterial regulatory proteins, tetR family
CHR48_01348	PF00465	Iron-containing alcohol dehydrogenase 
CHR48_01351	PF04983	RNA polymerase Rpb1, domain 3
CHR48_01351	PF00623	RNA polymerase Rpb1, domain 2
CHR48_01351	PF04998	RNA polymerase Rpb1, domain 5
CHR48_01351	PF04997	RNA polymerase Rpb1, domain 1
CHR48_01351	PF05000	RNA polymerase Rpb1, domain 4
CHR48_01352	PF04563	RNA polymerase beta subunit
CHR48_01352	PF04560	RNA polymerase Rpb2, domain 7
CHR48_01352	PF00562	RNA polymerase Rpb2, domain 6
CHR48_01352	PF10385	RNA polymerase beta subunit external 1 domain
CHR48_01352	PF04565	RNA polymerase Rpb2, domain 3
CHR48_01352	PF04561	RNA polymerase Rpb2, domain 2
CHR48_01353	PF07724	AAA domain (Cdc48 subfamily)
CHR48_01353	PF10431	C-terminal, D2-small domain, of ClpB protein 
CHR48_01353	PF02861	Clp amino terminal domain, pathogenicity island component
CHR48_01353	PF00004	ATPase family associated with various cellular activities (AAA)
CHR48_01353	PF17871	AAA lid domain
CHR48_01354	PF17727	CtsR C-terminal dimerization domain
CHR48_01354	PF05848	CtsR N-terminal HTH domain
CHR48_01359	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CHR48_01359	PF02403	Seryl-tRNA synthetase N-terminal domain
CHR48_01360	PF01712	Deoxynucleoside kinase
CHR48_01361	PF02557	D-alanyl-D-alanine carboxypeptidase
CHR48_01362	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CHR48_01362	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CHR48_01363	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CHR48_01363	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CHR48_01364	PF00231	ATP synthase
CHR48_01365	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CHR48_01365	PF00306	ATP synthase alpha/beta chain, C terminal domain
CHR48_01365	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CHR48_01366	PF00213	ATP synthase delta (OSCP) subunit
CHR48_01367	PF00430	ATP synthase B/B' CF(0)
CHR48_01368	PF00137	ATP synthase subunit C
CHR48_01369	PF00119	ATP synthase A chain
CHR48_01370	PF00860	Permease family
CHR48_01372	PF11066	Protein of unknown function (DUF2867)
CHR48_01372	PF13460	NAD(P)H-binding 
CHR48_01374	PF00464	Serine hydroxymethyltransferase
CHR48_01375	PF03481	Putative GTP-binding controlling metal-binding
CHR48_01375	PF01300	Telomere recombination
CHR48_01376	PF05175	Methyltransferase small domain
CHR48_01376	PF17827	PrmC N-terminal domain
CHR48_01377	PF00472	RF-1 domain
CHR48_01377	PF03462	PCRF domain
CHR48_01378	PF00265	Thymidine kinase
CHR48_01380	PF07685	CobB/CobQ-like glutamine amidotransferase domain
CHR48_01381	PF08245	Mur ligase middle domain
CHR48_01381	PF08353	Domain of unknown function (DUF1727)
CHR48_01382	PF01238	Phosphomannose isomerase type I
CHR48_01384	PF00132	Bacterial transferase hexapeptide (six repeats)
CHR48_01384	PF12464	Maltose acetyltransferase 
CHR48_01389	PF00005	ABC transporter
CHR48_01389	PF00664	ABC transporter transmembrane region
CHR48_01390	PF00664	ABC transporter transmembrane region
CHR48_01390	PF00005	ABC transporter
CHR48_01394	PF00300	Histidine phosphatase superfamily (branch 1)
CHR48_01398	PF03372	Endonuclease/Exonuclease/phosphatase family
CHR48_01400	PF00465	Iron-containing alcohol dehydrogenase 
CHR48_01400	PF00171	Aldehyde dehydrogenase family
CHR48_01401	PF05649	Peptidase family M13
CHR48_01401	PF01431	Peptidase family M13
CHR48_01409	PF04230	Polysaccharide pyruvyl transferase
CHR48_01412	PF13333	Integrase core domain
CHR48_01412	PF00665	Integrase core domain
CHR48_01412	PF13276	HTH-like domain
CHR48_01413	PF00535	Glycosyl transferase family 2
CHR48_01414	PF00535	Glycosyl transferase family 2
CHR48_01414	PF01501	Glycosyl transferase family 8
CHR48_01415	PF00535	Glycosyl transferase family 2
CHR48_01416	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
CHR48_01416	PF00535	Glycosyl transferase family 2
CHR48_01417	PF11380	Stealth protein CR2, conserved region 2
CHR48_01417	PF17101	Stealth protein CR1, conserved region 1
CHR48_01417	PF17103	Stealth protein CR4, conserved region 4
CHR48_01418	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
CHR48_01418	PF00535	Glycosyl transferase family 2
CHR48_01421	PF09364	XFP N-terminal domain
CHR48_01421	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
CHR48_01421	PF09363	XFP C-terminal domain
CHR48_01422	PF07702	UTRA domain
CHR48_01422	PF00392	Bacterial regulatory proteins, gntR family
CHR48_01423	PF02397	Bacterial sugar transferase
CHR48_01424	PF07690	Major Facilitator Superfamily
CHR48_01425	PF01966	HD domain
CHR48_01428	PF02350	UDP-N-acetylglucosamine 2-epimerase
CHR48_01429	PF01270	Glycosyl hydrolases family 8
CHR48_01438	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01439	PF00005	ABC transporter
CHR48_01440	PF00083	Sugar (and other) transporter
CHR48_01445	PF00248	Aldo/keto reductase family
CHR48_01446	PF11762	L-arabinose isomerase C-terminal domain
CHR48_01446	PF02610	L-arabinose isomerase
CHR48_01447	PF00596	Class II Aldolase and Adducin N-terminal domain
CHR48_01450	PF01306	LacY proton/sugar symporter
CHR48_01451	PF04616	Glycosyl hydrolases family 43
CHR48_01451	PF05270	Alpha-L-arabinofuranosidase B (ABFB) domain
CHR48_01452	PF00392	Bacterial regulatory proteins, gntR family
CHR48_01454	PF01554	MatE
CHR48_01455	PF12848	ABC transporter
CHR48_01455	PF00005	ABC transporter
CHR48_01456	PF00950	ABC 3 transport family
CHR48_01457	PF00005	ABC transporter
CHR48_01459	PF01047	MarR family
CHR48_01462	PF01757	Acyltransferase family
CHR48_01463	PF10263	SprT-like family
CHR48_01470	PF00083	Sugar (and other) transporter
CHR48_01471	PF00480	ROK family
CHR48_01472	PF06800	Sugar transport protein
CHR48_01473	PF07690	Major Facilitator Superfamily
CHR48_01474	PF00854	POT family
CHR48_01484	PF00768	D-alanyl-D-alanine carboxypeptidase
CHR48_01484	PF07943	Penicillin-binding protein 5, C-terminal domain
CHR48_01485	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_01485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_01486	PF00072	Response regulator receiver domain
CHR48_01486	PF00486	Transcriptional regulatory protein, C terminal
CHR48_01488	PF06071	Protein of unknown function (DUF933)
CHR48_01488	PF01926	50S ribosome-binding GTPase
CHR48_01489	PF06107	Bacterial protein of unknown function (DUF951)
CHR48_01490	PF17762	HTH domain found in ParB protein
CHR48_01490	PF02195	ParB-like nuclease domain
CHR48_01491	PF13614	AAA domain
CHR48_01492	PF02527	rRNA small subunit methyltransferase G
CHR48_01493	PF01156	Inosine-uridine preferring nucleoside hydrolase
CHR48_01494	PF00730	HhH-GPD superfamily base excision DNA repair protein
CHR48_01494	PF14815	NUDIX domain
CHR48_01495	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CHR48_01503	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_01503	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_01504	PF00072	Response regulator receiver domain
CHR48_01504	PF00486	Transcriptional regulatory protein, C terminal
CHR48_01507	PF13193	AMP-binding enzyme C-terminal domain
CHR48_01507	PF00501	AMP-binding enzyme
CHR48_01508	PF00378	Enoyl-CoA hydratase/isomerase
CHR48_01509	PF03061	Thioesterase superfamily
CHR48_01510	PF00857	Isochorismatase family
CHR48_01511	PF01209	ubiE/COQ5 methyltransferase family
CHR48_01513	PF02229	Transcriptional Coactivator p15 (PC4)
CHR48_01514	PF00710	Asparaginase, N-terminal
CHR48_01514	PF17763	Glutaminase/Asparaginase C-terminal domain
CHR48_01515	PF13520	Amino acid permease
CHR48_01516	PF00324	Amino acid permease
CHR48_01517	PF13520	Amino acid permease
CHR48_01519	PF06800	Sugar transport protein
CHR48_01520	PF07690	Major Facilitator Superfamily
CHR48_01522	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_01522	PF00107	Zinc-binding dehydrogenase
CHR48_01523	PF04608	Phosphatidylglycerophosphatase A
CHR48_01525	PF00561	alpha/beta hydrolase fold
CHR48_01526	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_01527	PF00230	Major intrinsic protein
CHR48_01529	PF03853	YjeF-related protein N-terminus
CHR48_01531	PF11799	impB/mucB/samB family C-terminal domain
CHR48_01531	PF11798	IMS family HHH motif
CHR48_01531	PF00817	impB/mucB/samB family
CHR48_01533	PF06146	Phosphate-starvation-inducible E
CHR48_01535	PF13520	Amino acid permease
CHR48_01536	PF01979	Amidohydrolase family
CHR48_01539	PF03060	Nitronate monooxygenase
CHR48_01540	PF01144	Coenzyme A transferase
CHR48_01541	PF03466	LysR substrate binding domain
CHR48_01541	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CHR48_01542	PF03601	Conserved hypothetical protein 698
CHR48_01544	PF01381	Helix-turn-helix
CHR48_01545	PF03601	Conserved hypothetical protein 698
CHR48_01548	PF01207	Dihydrouridine synthase (Dus)
CHR48_01553	PF00324	Amino acid permease
CHR48_01555	PF04262	Glutamate-cysteine ligase 
CHR48_01555	PF02655	ATP-grasp domain
CHR48_01555	PF18419	ATP-grasp-like domain
CHR48_01558	PF01638	HxlR-like helix-turn-helix
CHR48_01559	PF01594	AI-2E family transporter
CHR48_01561	PF03706	Lysylphosphatidylglycerol synthase TM region
CHR48_01561	PF09924	Uncharacterised conserved protein (DUF2156)
CHR48_01564	PF00708	Acylphosphatase
CHR48_01565	PF00497	Bacterial extracellular solute-binding proteins, family 3
CHR48_01566	PF00497	Bacterial extracellular solute-binding proteins, family 3
CHR48_01568	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01569	PF00005	ABC transporter
CHR48_01571	PF00005	ABC transporter
CHR48_01573	PF03649	Uncharacterised protein family (UPF0014)
CHR48_01574	PF00005	ABC transporter
CHR48_01576	PF00248	Aldo/keto reductase family
CHR48_01578	PF00005	ABC transporter
CHR48_01578	PF00664	ABC transporter transmembrane region
CHR48_01579	PF01047	MarR family
CHR48_01580	PF13344	Haloacid dehalogenase-like hydrolase
CHR48_01580	PF00293	NUDIX domain
CHR48_01583	PF02608	ABC transporter substrate-binding protein PnrA-like
CHR48_01584	PF00892	EamA-like transporter family
CHR48_01586	PF05958	tRNA (Uracil-5-)-methyltransferase
CHR48_01586	PF01938	TRAM domain
CHR48_01587	PF03358	NADPH-dependent FMN reductase
CHR48_01589	PF13411	MerR HTH family regulatory protein
CHR48_01594	PF13732	Domain of unknown function (DUF4162)
CHR48_01594	PF00005	ABC transporter
CHR48_01595	PF13520	Amino acid permease
CHR48_01597	PF00905	Penicillin binding protein transpeptidase domain
CHR48_01597	PF00912	Transglycosylase
CHR48_01598	PF02142	MGS-like domain
CHR48_01598	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CHR48_01598	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CHR48_01599	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CHR48_01599	PF00117	Glutamine amidotransferase class-I
CHR48_01600	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CHR48_01600	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CHR48_01601	PF00202	Aminotransferase class-III
CHR48_01602	PF00696	Amino acid kinase family
CHR48_01603	PF01960	ArgJ family
CHR48_01604	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CHR48_01604	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CHR48_01605	PF14698	Argininosuccinate lyase C-terminal
CHR48_01605	PF00206	Lyase
CHR48_01606	PF00764	Arginosuccinate synthase
CHR48_01607	PF02608	ABC transporter substrate-binding protein PnrA-like
CHR48_01608	PF00958	GMP synthase C terminal domain
CHR48_01608	PF02540	NAD synthase
CHR48_01608	PF00117	Glutamine amidotransferase class-I
CHR48_01610	PF13536	Putative multidrug resistance efflux transporter
CHR48_01611	PF00480	ROK family
CHR48_01614	PF00232	Glycosyl hydrolase family 1
CHR48_01615	PF00571	CBS domain
CHR48_01615	PF01380	SIS domain
CHR48_01618	PF00005	ABC transporter
CHR48_01618	PF13732	Domain of unknown function (DUF4162)
CHR48_01620	PF01381	Helix-turn-helix
CHR48_01622	PF00857	Isochorismatase family
CHR48_01634	PF01161	Phosphatidylethanolamine-binding protein
CHR48_01635	PF07690	Major Facilitator Superfamily
CHR48_01640	PF00121	Triosephosphate isomerase
CHR48_01642	PF00860	Permease family
CHR48_01643	PF05656	Protein of unknown function (DUF805)
CHR48_01647	PF00075	RNase H
CHR48_01650	PF03176	MMPL family
CHR48_01651	PF02687	FtsX-like permease family
CHR48_01651	PF12704	MacB-like periplasmic core domain
CHR48_01652	PF00005	ABC transporter
CHR48_01653	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
CHR48_01654	PF02386	Cation transport protein
CHR48_01655	PF02590	Predicted SPOUT methyltransferase
CHR48_01657	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_01657	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01659	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01659	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_01663	PF00324	Amino acid permease
CHR48_01664	PF02080	TrkA-C domain
CHR48_01664	PF02254	TrkA-N domain
CHR48_01667	PF01497	Periplasmic binding protein
CHR48_01668	PF01032	FecCD transport family
CHR48_01669	PF00005	ABC transporter
CHR48_01670	PF10502	Signal peptidase, peptidase S26 
CHR48_01671	PF02096	60Kd inner membrane protein
CHR48_01672	PF00825	Ribonuclease P
CHR48_01673	PF00468	Ribosomal protein L34
CHR48_01674	PF08299	Bacterial dnaA protein helix-turn-helix
CHR48_01674	PF11638	DnaA N-terminal domain
CHR48_01674	PF00308	Bacterial dnaA  protein
CHR48_01675	PF00712	DNA polymerase III beta subunit, N-terminal domain
CHR48_01675	PF02767	DNA polymerase III beta subunit, central domain
CHR48_01675	PF02768	DNA polymerase III beta subunit, C-terminal domain
CHR48_01677	PF02463	RecF/RecN/SMC N terminal domain
CHR48_01678	PF00986	DNA gyrase B subunit, carboxyl terminus
CHR48_01678	PF01751	Toprim domain
CHR48_01678	PF00204	DNA gyrase B
CHR48_01678	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_01679	PF03989	DNA gyrase C-terminal domain, beta-propeller
CHR48_01679	PF00521	DNA gyrase/topoisomerase IV, subunit A
CHR48_01681	PF13673	Acetyltransferase (GNAT) domain
CHR48_01682	PF00884	Sulfatase
CHR48_01683	PF13411	MerR HTH family regulatory protein
CHR48_01684	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
CHR48_01686	PF02146	Sir2 family
CHR48_01699	PF01588	Putative tRNA binding domain
CHR48_01699	PF09334	tRNA synthetases class I (M)
CHR48_01699	PF08264	Anticodon-binding domain of tRNA
CHR48_01700	PF00999	Sodium/hydrogen exchanger family
CHR48_01701	PF01026	TatD related DNase
CHR48_01702	PF13331	Domain of unknown function (DUF4093)
CHR48_01703	PF00398	Ribosomal RNA adenine dimethylase
CHR48_01704	PF03471	Transporter associated domain
CHR48_01704	PF00571	CBS domain
CHR48_01704	PF01595	Cyclin M transmembrane N-terminal domain
CHR48_01705	PF01595	Cyclin M transmembrane N-terminal domain
CHR48_01705	PF03471	Transporter associated domain
CHR48_01705	PF00571	CBS domain
CHR48_01706	PF06257	Biofilm formation stimulator VEG
CHR48_01707	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CHR48_01708	PF00303	Thymidylate synthase
CHR48_01709	PF03816	Cell envelope-related transcriptional attenuator domain
CHR48_01710	PF02378	Phosphotransferase system, EIIC 
CHR48_01710	PF00367	phosphotransferase system, EIIB
CHR48_01711	PF00232	Glycosyl hydrolase family 1
CHR48_01712	PF00232	Glycosyl hydrolase family 1
CHR48_01714	PF00005	ABC transporter
CHR48_01715	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01716	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01717	PF02872	5'-nucleotidase, C-terminal domain
CHR48_01717	PF00149	Calcineurin-like phosphoesterase
CHR48_01718	PF07662	Na+ dependent nucleoside transporter C-terminus
CHR48_01718	PF01773	Na+ dependent nucleoside transporter N-terminus
CHR48_01719	PF04024	PspC domain
CHR48_01720	PF03551	Transcriptional regulator PadR-like family
CHR48_01723	PF02673	Bacitracin resistance protein BacA
CHR48_01724	PF03352	Methyladenine glycosylase
CHR48_01728	PF00083	Sugar (and other) transporter
CHR48_01729	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
CHR48_01729	PF04616	Glycosyl hydrolases family 43
CHR48_01731	PF00480	ROK family
CHR48_01733	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CHR48_01733	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CHR48_01734	PF00248	Aldo/keto reductase family
CHR48_01737	PF07690	Major Facilitator Superfamily
CHR48_01738	PF02378	Phosphotransferase system, EIIC 
CHR48_01741	PF00440	Bacterial regulatory proteins, tetR family
CHR48_01744	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CHR48_01744	PF02806	Alpha amylase, C-terminal all-beta domain
CHR48_01744	PF00128	Alpha amylase, catalytic domain
CHR48_01745	PF00132	Bacterial transferase hexapeptide (six repeats)
CHR48_01745	PF00483	Nucleotidyl transferase
CHR48_01746	PF00483	Nucleotidyl transferase
CHR48_01747	PF00534	Glycosyl transferases group 1
CHR48_01747	PF08323	Starch synthase catalytic domain
CHR48_01748	PF00343	Carbohydrate phosphorylase
CHR48_01749	PF02903	Alpha amylase, N-terminal ig-like domain
CHR48_01749	PF00128	Alpha amylase, catalytic domain
CHR48_01750	PF01195	Peptidyl-tRNA hydrolase
CHR48_01751	PF00271	Helicase conserved C-terminal domain
CHR48_01751	PF02559	CarD-like/TRCF domain
CHR48_01751	PF00270	DEAD/DEAH box helicase
CHR48_01751	PF03461	TRCF domain
CHR48_01751	PF17757	UvrB interaction domain
CHR48_01752	PF01943	Polysaccharide biosynthesis protein
CHR48_01752	PF14667	Polysaccharide biosynthesis C-terminal domain
CHR48_01753	PF01479	S4 domain
CHR48_01755	PF01171	PP-loop family
CHR48_01756	PF11734	TilS substrate C-terminal domain
CHR48_01756	PF00156	Phosphoribosyl transferase domain
CHR48_01756	PF01171	PP-loop family
CHR48_01757	PF00004	ATPase family associated with various cellular activities (AAA)
CHR48_01757	PF17862	AAA+ lid domain
CHR48_01757	PF06480	FtsH Extracellular
CHR48_01757	PF01434	Peptidase family M41
CHR48_01758	PF01430	Hsp33 protein
CHR48_01759	PF00152	tRNA synthetases class II (D, K and N) 
CHR48_01759	PF01336	OB-fold nucleic acid binding domain
CHR48_01772	PF04226	Transglycosylase associated protein
CHR48_01773	PF00248	Aldo/keto reductase family
CHR48_01775	PF01380	SIS domain
CHR48_01775	PF01418	Helix-turn-helix domain, rpiR family
CHR48_01776	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CHR48_01776	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CHR48_01786	PF00579	tRNA synthetases class I (W and Y)
CHR48_01786	PF01479	S4 domain
CHR48_01789	PF00535	Glycosyl transferase family 2
CHR48_01792	PF01063	Amino-transferase class IV
CHR48_01793	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CHR48_01794	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CHR48_01795	PF00232	Glycosyl hydrolase family 1
CHR48_01796	PF00232	Glycosyl hydrolase family 1
CHR48_01797	PF02378	Phosphotransferase system, EIIC 
CHR48_01799	PF00155	Aminotransferase class I and II
CHR48_01800	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CHR48_01800	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CHR48_01803	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CHR48_01804	PF10509	Galactokinase galactose-binding signature
CHR48_01804	PF08544	GHMP kinases C terminal 
CHR48_01804	PF00288	GHMP kinases N terminal domain
CHR48_01805	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CHR48_01805	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CHR48_01806	PF00005	ABC transporter
CHR48_01806	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_01807	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_01807	PF00005	ABC transporter
CHR48_01808	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01809	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01810	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01811	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_01812	PF00664	ABC transporter transmembrane region
CHR48_01812	PF00005	ABC transporter
CHR48_01813	PF00664	ABC transporter transmembrane region
CHR48_01813	PF00005	ABC transporter
CHR48_01814	PF00664	ABC transporter transmembrane region
CHR48_01814	PF00005	ABC transporter
CHR48_01817	PF13185	GAF domain
CHR48_01818	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01818	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_01820	PF00860	Permease family
CHR48_01821	PF00156	Phosphoribosyl transferase domain
CHR48_01822	PF00248	Aldo/keto reductase family
CHR48_01823	PF02652	L-lactate permease
CHR48_01825	PF00106	short chain dehydrogenase
CHR48_01826	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CHR48_01826	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CHR48_01832	PF00534	Glycosyl transferases group 1
CHR48_01848	PF07859	alpha/beta hydrolase fold
CHR48_01851	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01851	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_01854	PF00005	ABC transporter
CHR48_01854	PF17912	MalK OB fold domain
CHR48_01855	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01856	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01859	PF00004	ATPase family associated with various cellular activities (AAA)
CHR48_01859	PF10431	C-terminal, D2-small domain, of ClpB protein 
CHR48_01859	PF07724	AAA domain (Cdc48 subfamily)
CHR48_01859	PF17871	AAA lid domain
CHR48_01860	PF00497	Bacterial extracellular solute-binding proteins, family 3
CHR48_01861	PF02574	Homocysteine S-methyltransferase
CHR48_01862	PF00324	Amino acid permease
CHR48_01863	PF11838	ERAP1-like C-terminal domain
CHR48_01863	PF01433	Peptidase family M1 domain
CHR48_01866	PF13802	Galactose mutarotase-like
CHR48_01866	PF01055	Glycosyl hydrolases family 31 
CHR48_01867	PF12833	Helix-turn-helix domain
CHR48_01867	PF17853	GGDEF-like domain
CHR48_01870	PF01625	Peptide methionine sulfoxide reductase
CHR48_01871	PF00486	Transcriptional regulatory protein, C terminal
CHR48_01871	PF00072	Response regulator receiver domain
CHR48_01872	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_01872	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_01874	PF03816	Cell envelope-related transcriptional attenuator domain
CHR48_01876	PF00557	Metallopeptidase family M24
CHR48_01878	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CHR48_01878	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CHR48_01878	PF02772	S-adenosylmethionine synthetase, central domain
CHR48_01880	PF13333	Integrase core domain
CHR48_01880	PF00665	Integrase core domain
CHR48_01880	PF13276	HTH-like domain
CHR48_01882	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CHR48_01882	PF02772	S-adenosylmethionine synthetase, central domain
CHR48_01882	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CHR48_01884	PF03009	Glycerophosphoryl diester phosphodiesterase family
CHR48_01886	PF00232	Glycosyl hydrolase family 1
CHR48_01888	PF03358	NADPH-dependent FMN reductase
CHR48_01891	PF01938	TRAM domain
CHR48_01891	PF05958	tRNA (Uracil-5-)-methyltransferase
CHR48_01893	PF01569	PAP2 superfamily
CHR48_01894	PF13603	Leucyl-tRNA synthetase, Domain 2
CHR48_01894	PF00133	tRNA synthetases class I (I, L, M and V)
CHR48_01894	PF08264	Anticodon-binding domain of tRNA
CHR48_01894	PF09334	tRNA synthetases class I (M)
CHR48_01895	PF00534	Glycosyl transferases group 1
CHR48_01895	PF13439	Glycosyltransferase Family 4
CHR48_01897	PF14667	Polysaccharide biosynthesis C-terminal domain
CHR48_01897	PF01943	Polysaccharide biosynthesis protein
CHR48_01901	PF01053	Cys/Met metabolism PLP-dependent enzyme
CHR48_01902	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CHR48_01904	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CHR48_01904	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CHR48_01906	PF13520	Amino acid permease
CHR48_01907	PF01546	Peptidase family M20/M25/M40
CHR48_01910	PF12705	PD-(D/E)XK nuclease superfamily
CHR48_01913	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_01913	PF00107	Zinc-binding dehydrogenase
CHR48_01914	PF07690	Major Facilitator Superfamily
CHR48_01915	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CHR48_01915	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CHR48_01916	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CHR48_01916	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CHR48_01917	PF00293	NUDIX domain
CHR48_01918	PF00156	Phosphoribosyl transferase domain
CHR48_01918	PF09182	Bacterial purine repressor, N-terminal
CHR48_01919	PF12804	MobA-like NTP transferase domain
CHR48_01919	PF00132	Bacterial transferase hexapeptide (six repeats)
CHR48_01920	PF14572	Phosphoribosyl synthetase-associated domain
CHR48_01920	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CHR48_01921	PF01156	Inosine-uridine preferring nucleoside hydrolase
CHR48_01923	PF01250	Ribosomal protein S6
CHR48_01924	PF00436	Single-strand binding protein family
CHR48_01925	PF01084	Ribosomal protein S18
CHR48_01931	PF00072	Response regulator receiver domain
CHR48_01931	PF00486	Transcriptional regulatory protein, C terminal
CHR48_01932	PF00672	HAMP domain
CHR48_01932	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CHR48_01932	PF00512	His Kinase A (phospho-acceptor) domain
CHR48_01932	PF13426	PAS domain
CHR48_01935	PF00753	Metallo-beta-lactamase superfamily
CHR48_01936	PF13180	PDZ domain
CHR48_01938	PF01966	HD domain
CHR48_01940	PF05066	HB1, ASXL, restriction endonuclease HTH domain
CHR48_01942	PF00117	Glutamine amidotransferase class-I
CHR48_01942	PF06418	CTP synthase N-terminus
CHR48_01943	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CHR48_01944	PF00271	Helicase conserved C-terminal domain
CHR48_01944	PF00270	DEAD/DEAH box helicase
CHR48_01945	PF00842	Alanine racemase, C-terminal domain
CHR48_01945	PF01168	Alanine racemase, N-terminal domain
CHR48_01946	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CHR48_01947	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01947	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_01949	PF13193	AMP-binding enzyme C-terminal domain
CHR48_01949	PF00501	AMP-binding enzyme
CHR48_01950	PF03062	MBOAT, membrane-bound O-acyltransferase family
CHR48_01951	PF00550	Phosphopantetheine attachment site
CHR48_01952	PF04914	DltD protein
CHR48_01956	PF13538	UvrD-like helicase C-terminal domain
CHR48_01957	PF00579	tRNA synthetases class I (W and Y)
CHR48_01959	PF01256	Carbohydrate kinase
CHR48_01961	PF01546	Peptidase family M20/M25/M40
CHR48_01965	PF03099	Biotin/lipoate A/B protein ligase family
CHR48_01965	PF02237	Biotin protein ligase C terminal domain
CHR48_01966	PF02632	BioY family
CHR48_01967	PF00625	Guanylate kinase
CHR48_01970	PF00005	ABC transporter
CHR48_01971	PF00497	Bacterial extracellular solute-binding proteins, family 3
CHR48_01972	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01973	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01974	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_01975	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01976	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_01976	PF12911	N-terminal TM domain of oligopeptide transport permease C
CHR48_01977	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_01977	PF00005	ABC transporter
CHR48_01978	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CHR48_01978	PF00005	ABC transporter
CHR48_01979	PF01368	DHH family
CHR48_01979	PF02272	DHHA1 domain
CHR48_01980	PF03948	Ribosomal protein L9, C-terminal domain
CHR48_01980	PF01281	Ribosomal protein L9, N-terminal domain
CHR48_01981	PF03796	DnaB-like helicase C terminal domain
CHR48_01981	PF00772	DnaB-like helicase N terminal domain
CHR48_01982	PF07690	Major Facilitator Superfamily
CHR48_01984	PF01546	Peptidase family M20/M25/M40
CHR48_01984	PF07687	Peptidase dimerisation domain
CHR48_01989	PF04304	Protein of unknown function (DUF454)
CHR48_01990	PF00288	GHMP kinases N terminal domain
CHR48_01990	PF08544	GHMP kinases C terminal 
CHR48_01992	PF02608	ABC transporter substrate-binding protein PnrA-like
CHR48_01995	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_01998	PF00300	Histidine phosphatase superfamily (branch 1)
CHR48_01999	PF00255	Glutathione peroxidase
CHR48_02001	PF01906	Putative heavy-metal-binding
CHR48_02002	PF01063	Amino-transferase class IV
CHR48_02003	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CHR48_02003	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
CHR48_02004	PF01594	AI-2E family transporter
CHR48_02005	PF01022	Bacterial regulatory protein, arsR family
CHR48_02007	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CHR48_02007	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CHR48_02012	PF01225	Mur ligase family, catalytic domain
CHR48_02012	PF02875	Mur ligase family, glutamate ligase domain
CHR48_02012	PF08245	Mur ligase middle domain
CHR48_02015	PF01098	Cell cycle protein
CHR48_02016	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CHR48_02016	PF03807	NADP oxidoreductase coenzyme F420-dependent
CHR48_02021	PF02805	Metal binding domain of Ada
CHR48_02021	PF12833	Helix-turn-helix domain
CHR48_02021	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CHR48_02021	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CHR48_02024	PF00005	ABC transporter
CHR48_02024	PF12704	MacB-like periplasmic core domain
CHR48_02024	PF02687	FtsX-like permease family
CHR48_02025	PF01979	Amidohydrolase family
CHR48_02029	PF00163	Ribosomal protein S4/S9 N-terminal domain
CHR48_02029	PF01479	S4 domain
CHR48_02030	PF07690	Major Facilitator Superfamily
CHR48_02032	PF06160	Septation ring formation regulator, EzrA 
CHR48_02033	PF02581	Thiamine monophosphate synthase
CHR48_02035	PF00860	Permease family
CHR48_02036	PF00689	Cation transporting ATPase, C-terminus
CHR48_02036	PF00690	Cation transporter/ATPase, N-terminus
CHR48_02037	PF00709	Adenylosuccinate synthetase
CHR48_02047	PF08240	Alcohol dehydrogenase GroES-like domain
CHR48_02047	PF00107	Zinc-binding dehydrogenase
CHR48_02048	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CHR48_02049	PF01979	Amidohydrolase family
CHR48_02052	PF07690	Major Facilitator Superfamily
CHR48_02053	PF17755	UvrA DNA-binding domain
CHR48_02053	PF17760	UvrA interaction domain
CHR48_02053	PF00005	ABC transporter
CHR48_02054	PF00248	Aldo/keto reductase family
CHR48_02055	PF02645	Uncharacterised protein, DegV family COG1307
CHR48_02058	PF00265	Thymidine kinase
CHR48_02060	PF00893	Small Multidrug Resistance protein
CHR48_02061	PF00893	Small Multidrug Resistance protein
CHR48_02064	PF00677	Lumazine binding domain
CHR48_02065	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CHR48_02065	PF00925	GTP cyclohydrolase II
CHR48_02066	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CHR48_02068	PF01641	SelR domain
CHR48_02069	PF00005	ABC transporter
CHR48_02069	PF00571	CBS domain
CHR48_02070	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_02072	PF00465	Iron-containing alcohol dehydrogenase 
CHR48_02073	PF04474	Protein of unknown function (DUF554)
CHR48_02078	PF04138	GtrA-like protein
CHR48_02080	PF01255	Putative undecaprenyl diphosphate synthase
CHR48_02082	PF17820	PDZ domain
CHR48_02082	PF02163	Peptidase family M50
CHR48_02083	PF03129	Anticodon binding domain
CHR48_02083	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CHR48_02083	PF04073	Aminoacyl-tRNA editing domain
CHR48_02084	PF11490	DNA polymerase III polC-type N-terminus II
CHR48_02084	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CHR48_02084	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CHR48_02084	PF02811	PHP domain
CHR48_02084	PF14480	DNA polymerase III polC-type N-terminus I
CHR48_02084	PF00929	Exonuclease
CHR48_02084	PF14579	Helix-hairpin-helix motif
CHR48_02085	PF02811	PHP domain
CHR48_02085	PF14579	Helix-hairpin-helix motif
CHR48_02085	PF00929	Exonuclease
CHR48_02085	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CHR48_02085	PF11490	DNA polymerase III polC-type N-terminus II
CHR48_02085	PF14480	DNA polymerase III polC-type N-terminus I
CHR48_02085	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CHR48_02100	PF12849	PBP superfamily domain
CHR48_02101	PF00271	Helicase conserved C-terminal domain
CHR48_02101	PF04851	Type III restriction enzyme, res subunit
CHR48_02103	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
CHR48_02103	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CHR48_02104	PF01053	Cys/Met metabolism PLP-dependent enzyme
CHR48_02106	PF09371	Tex-like protein N-terminal domain
CHR48_02106	PF00575	S1 RNA binding domain
CHR48_02106	PF17674	HHH domain
CHR48_02106	PF16921	Tex protein YqgF-like domain
CHR48_02111	PF00480	ROK family
CHR48_02112	PF00232	Glycosyl hydrolase family 1
CHR48_02113	PF03123	CAT RNA binding domain
CHR48_02113	PF00874	PRD domain
CHR48_02114	PF00367	phosphotransferase system, EIIB
CHR48_02114	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CHR48_02114	PF02378	Phosphotransferase system, EIIC 
CHR48_02117	PF00440	Bacterial regulatory proteins, tetR family
CHR48_02122	PF07690	Major Facilitator Superfamily
CHR48_02129	PF00534	Glycosyl transferases group 1
CHR48_02131	PF00534	Glycosyl transferases group 1
CHR48_02142	PF00013	KH domain
CHR48_02142	PF12072	Domain of unknown function (DUF3552)
CHR48_02142	PF01966	HD domain
CHR48_02144	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CHR48_02144	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CHR48_02145	PF13520	Amino acid permease
CHR48_02146	PF00696	Amino acid kinase family
CHR48_02149	PF06993	Protein of unknown function (DUF1304)
CHR48_02150	PF00005	ABC transporter
CHR48_02151	PF02687	FtsX-like permease family
CHR48_02157	PF00356	Bacterial regulatory proteins, lacI family
CHR48_02159	PF03636	Glycosyl hydrolase family 65, N-terminal domain 
CHR48_02159	PF03632	Glycosyl hydrolase family 65 central catalytic domain
CHR48_02159	PF03633	Glycosyl hydrolase family 65, C-terminal domain 
CHR48_02160	PF13419	Haloacid dehalogenase-like hydrolase
CHR48_02161	PF07729	FCD domain
CHR48_02161	PF00392	Bacterial regulatory proteins, gntR family
CHR48_02163	PF08125	Mannitol dehydrogenase C-terminal domain
CHR48_02163	PF01232	Mannitol dehydrogenase Rossmann domain
CHR48_02164	PF03786	D-mannonate dehydratase (UxuA)
CHR48_02165	PF02614	Glucuronate isomerase
CHR48_02166	PF01081	KDPG and KHG aldolase
CHR48_02167	PF00294	pfkB family carbohydrate kinase
CHR48_02169	PF03180	NLPA lipoprotein
CHR48_02170	PF07676	WD40-like Beta Propeller Repeat
CHR48_02170	PF00326	Prolyl oligopeptidase family
CHR48_02183	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CHR48_02183	PF01227	GTP cyclohydrolase I
CHR48_02184	PF01227	GTP cyclohydrolase I
CHR48_02185	PF02875	Mur ligase family, glutamate ligase domain
CHR48_02185	PF08245	Mur ligase middle domain
CHR48_02186	PF00809	Pterin binding enzyme
CHR48_02187	PF00528	Binding-protein-dependent transport system inner membrane component
CHR48_02188	PF00005	ABC transporter
CHR48_02190	PF13193	AMP-binding enzyme C-terminal domain
CHR48_02190	PF00501	AMP-binding enzyme
CHR48_02192	PF07690	Major Facilitator Superfamily
CHR48_02193	PF03551	Transcriptional regulator PadR-like family
CHR48_02197	PF00356	Bacterial regulatory proteins, lacI family
CHR48_02200	PF00294	pfkB family carbohydrate kinase
CHR48_02201	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CHR48_02202	PF01380	SIS domain
CHR48_02204	PF00356	Bacterial regulatory proteins, lacI family
CHR48_02205	PF05025	RbsD / FucU transport protein family
CHR48_02206	PF07690	Major Facilitator Superfamily
CHR48_02207	PF00294	pfkB family carbohydrate kinase
CHR48_02207	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CHR48_02208	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CHR48_02209	PF02086	D12 class N6 adenine-specific DNA methyltransferase
CHR48_02213	PF00293	NUDIX domain
CHR48_02216	PF13333	Integrase core domain
CHR48_02216	PF00665	Integrase core domain
CHR48_02216	PF13276	HTH-like domain
CHR48_02218	PF01156	Inosine-uridine preferring nucleoside hydrolase
CHR48_02222	PF03051	Peptidase C1-like family
CHR48_02228	PF00106	short chain dehydrogenase
CHR48_02230	PF00478	IMP dehydrogenase / GMP reductase domain
