AUC65_00009 PF02146 Sir2 family AUC65_00011 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AUC65_00012 PF13411 MerR HTH family regulatory protein AUC65_00013 PF00884 Sulfatase AUC65_00014 PF13673 Acetyltransferase (GNAT) domain AUC65_00016 PF00521 DNA gyrase/topoisomerase IV, subunit A AUC65_00016 PF03989 DNA gyrase C-terminal domain, beta-propeller AUC65_00017 PF00204 DNA gyrase B AUC65_00017 PF00986 DNA gyrase B subunit, carboxyl terminus AUC65_00017 PF01751 Toprim domain AUC65_00017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_00018 PF02463 RecF/RecN/SMC N terminal domain AUC65_00019 PF13275 S4 domain AUC65_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain AUC65_00020 PF02767 DNA polymerase III beta subunit, central domain AUC65_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain AUC65_00021 PF00308 Bacterial dnaA protein AUC65_00021 PF08299 Bacterial dnaA protein helix-turn-helix AUC65_00022 PF00468 Ribosomal protein L34 AUC65_00023 PF00825 Ribonuclease P AUC65_00024 PF02096 60Kd inner membrane protein AUC65_00025 PF00717 Peptidase S24-like AUC65_00026 PF00005 ABC transporter AUC65_00027 PF01032 FecCD transport family AUC65_00028 PF01497 Periplasmic binding protein AUC65_00029 PF05031 Iron Transport-associated domain AUC65_00030 PF05031 Iron Transport-associated domain AUC65_00031 PF02080 TrkA-C domain AUC65_00031 PF02254 TrkA-N domain AUC65_00032 PF00324 Amino acid permease AUC65_00033 PF13460 NADH(P)-binding AUC65_00034 PF00583 Acetyltransferase (GNAT) family AUC65_00035 PF04018 AUC65_00035 AUC65_00036 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_00036 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_00038 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_00038 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_00039 PF04657 AUC65_00039 AUC65_00040 PF02590 Predicted SPOUT methyltransferase AUC65_00041 PF02386 Cation transport protein AUC65_00043 PF00005 ABC transporter AUC65_00044 PF02687 AUC65_00044 AUC65_00044 PF12704 MacB-like periplasmic core domain AUC65_00045 PF03176 MMPL family AUC65_00046 PF08282 haloacid dehalogenase-like hydrolase AUC65_00048 PF00075 RNase H AUC65_00048 PF01693 Caulimovirus viroplasmin AUC65_00049 PF09529 AUC65_00049 AUC65_00050 PF13303 AUC65_00050 AUC65_00052 PF05656 AUC65_00052 AUC65_00053 PF00860 Permease family AUC65_00055 PF00121 Triosephosphate isomerase AUC65_00056 PF09335 AUC65_00056 AUC65_00058 PF03600 Citrate transporter AUC65_00059 PF13463 Winged helix DNA-binding domain AUC65_00060 PF07690 Major Facilitator Superfamily AUC65_00061 PF01161 Phosphatidylethanolamine-binding protein AUC65_00065 PF13280 AUC65_00065 AUC65_00068 PF08867 AUC65_00068 AUC65_00070 PF06769 Plasmid encoded toxin Txe AUC65_00073 PF00857 Isochorismatase family AUC65_00075 PF01381 Helix-turn-helix AUC65_00076 PF01047 MarR family AUC65_00077 PF00005 ABC transporter AUC65_00077 PF13732 AUC65_00077 AUC65_00078 PF01061 AUC65_00078 AUC65_00080 PF01380 SIS domain AUC65_00080 PF01418 Helix-turn-helix domain, rpiR family AUC65_00081 PF00232 Glycosyl hydrolase family 1 AUC65_00082 PF01925 AUC65_00082 AUC65_00083 PF07690 Major Facilitator Superfamily AUC65_00084 PF00480 ROK family AUC65_00085 PF13536 Multidrug resistance efflux transporter AUC65_00086 PF01381 Helix-turn-helix AUC65_00087 PF00117 Glutamine amidotransferase class-I AUC65_00087 PF00958 GMP synthase C terminal domain AUC65_00087 PF02540 NAD synthase AUC65_00088 PF02608 Basic membrane protein AUC65_00089 PF00764 Arginosuccinate synthase AUC65_00090 PF00206 Lyase AUC65_00090 PF14698 Argininosuccinate lyase C-terminal AUC65_00091 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUC65_00091 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUC65_00092 PF01960 ArgJ family AUC65_00093 PF00696 Amino acid kinase family AUC65_00094 PF00202 Aminotransferase class-III AUC65_00095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUC65_00095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUC65_00096 PF00117 Glutamine amidotransferase class-I AUC65_00096 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AUC65_00097 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_00097 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUC65_00098 PF00912 Transglycosylase AUC65_00100 PF13520 Amino acid permease AUC65_00101 PF00005 ABC transporter AUC65_00106 PF13411 MerR HTH family regulatory protein AUC65_00107 PF00106 short chain dehydrogenase AUC65_00108 PF03358 NADPH-dependent FMN reductase AUC65_00109 PF01938 TRAM domain AUC65_00109 PF05958 tRNA (Uracil-5-)-methyltransferase AUC65_00111 PF00892 EamA-like transporter family AUC65_00112 PF02608 Basic membrane protein AUC65_00113 PF01764 Lipase (class 3) AUC65_00115 PF00293 NUDIX domain AUC65_00116 PF01047 MarR family AUC65_00117 PF00005 ABC transporter AUC65_00117 PF00664 ABC transporter transmembrane region AUC65_00119 PF00248 Aldo/keto reductase family AUC65_00120 PF00440 Bacterial regulatory proteins, tetR family AUC65_00121 PF00005 ABC transporter AUC65_00122 PF03649 AUC65_00122 AUC65_00123 PF00392 Bacterial regulatory proteins, gntR family AUC65_00124 PF00005 ABC transporter AUC65_00126 PF00005 ABC transporter AUC65_00127 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00129 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_00130 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_00131 PF00708 Acylphosphatase AUC65_00132 PF01040 UbiA prenyltransferase family AUC65_00133 PF03706 AUC65_00133 AUC65_00133 PF09924 Uncharacterized conserved protein (DUF2156) AUC65_00134 PF00561 alpha/beta hydrolase fold AUC65_00135 PF01594 AUC65_00135 AUC65_00136 PF01638 HxlR-like helix-turn-helix AUC65_00137 PF12680 SnoaL-like domain AUC65_00138 PF13460 NADH(P)-binding AUC65_00139 PF04262 Glutamate-cysteine ligase AUC65_00141 PF00324 Amino acid permease AUC65_00142 PF07859 alpha/beta hydrolase fold AUC65_00144 PF03631 AUC65_00144 AUC65_00145 PF05708 Orthopoxvirus protein of unknown function (DUF830) AUC65_00146 PF01207 Dihydrouridine synthase (Dus) AUC65_00147 PF00583 Acetyltransferase (GNAT) family AUC65_00149 PF03601 AUC65_00149 AUC65_00150 PF01381 Helix-turn-helix AUC65_00152 PF03601 AUC65_00152 AUC65_00153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC65_00153 PF03466 LysR substrate binding domain AUC65_00154 PF01144 Coenzyme A transferase AUC65_00155 PF03060 Nitronate monooxygenase AUC65_00157 PF00929 Exonuclease AUC65_00158 PF01979 Amidohydrolase family AUC65_00159 PF13520 Amino acid permease AUC65_00160 PF01545 Cation efflux family AUC65_00161 PF06146 AUC65_00161 AUC65_00163 PF00817 impB/mucB/samB family AUC65_00163 PF11799 impB/mucB/samB family C-terminal domain AUC65_00164 PF13454 FAD-NAD(P)-binding AUC65_00165 PF03853 YjeF-related protein N-terminus AUC65_00167 PF00230 Major intrinsic protein AUC65_00168 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_00169 PF12697 Alpha/beta hydrolase family AUC65_00171 PF04608 Phosphatidylglycerophosphatase A AUC65_00172 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_00172 PF13602 Zinc-binding dehydrogenase AUC65_00174 PF07690 Major Facilitator Superfamily AUC65_00175 PF06800 AUC65_00175 AUC65_00177 PF13520 Amino acid permease AUC65_00178 PF00324 Amino acid permease AUC65_00179 PF13520 Amino acid permease AUC65_00180 PF00710 Asparaginase AUC65_00181 PF02229 Transcriptional Coactivator p15 (PC4) AUC65_00183 PF01209 ubiE/COQ5 methyltransferase family AUC65_00184 PF00857 Isochorismatase family AUC65_00185 PF03061 Thioesterase superfamily AUC65_00186 PF00378 Enoyl-CoA hydratase/isomerase family AUC65_00187 PF00501 AMP-binding enzyme AUC65_00187 PF13193 AMP-binding enzyme C-terminal domain AUC65_00188 PF06458 MucBP domain AUC65_00189 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC65_00190 PF00072 Response regulator receiver domain AUC65_00190 PF00486 Transcriptional regulatory protein, C terminal AUC65_00191 PF00512 His Kinase A (phospho-acceptor) domain AUC65_00191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_00192 PF00535 Glycosyl transferase family 2 AUC65_00192 PF04138 AUC65_00192 AUC65_00193 PF09992 Predicted periplasmic protein (DUF2233) AUC65_00195 PF14262 Domain of unknown function (DUF4353) AUC65_00196 PF09359 VTC domain AUC65_00197 PF16316 AUC65_00197 AUC65_00198 PF05656 AUC65_00198 AUC65_00199 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AUC65_00200 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC65_00200 PF14815 NUDIX domain AUC65_00201 PF01156 Inosine-uridine preferring nucleoside hydrolase AUC65_00202 PF02527 rRNA small subunit methyltransferase G AUC65_00203 PF13614 AAA domain AUC65_00204 PF02195 ParB-like nuclease domain AUC65_00205 PF06107 AUC65_00205 AUC65_00206 PF01926 50S ribosome-binding GTPase AUC65_00206 PF06071 Protein of unknown function (DUF933) AUC65_00207 PF06570 AUC65_00207 AUC65_00208 PF00072 Response regulator receiver domain AUC65_00208 PF00486 Transcriptional regulatory protein, C terminal AUC65_00209 PF00512 His Kinase A (phospho-acceptor) domain AUC65_00209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_00210 PF00768 D-alanyl-D-alanine carboxypeptidase AUC65_00210 PF07943 Penicillin-binding protein 5, C-terminal domain AUC65_00211 PF08876 AUC65_00211 AUC65_00213 PF04542 Sigma-70 region 2 AUC65_00213 PF08281 Sigma-70, region 4 AUC65_00214 PF11738 Protein of unknown function (DUF3298) AUC65_00215 PF07690 Major Facilitator Superfamily AUC65_00219 PF00149 Calcineurin-like phosphoesterase AUC65_00220 PF00854 POT family AUC65_00221 PF07690 Major Facilitator Superfamily AUC65_00222 PF06800 AUC65_00222 AUC65_00223 PF00480 ROK family AUC65_00224 PF00083 Sugar (and other) transporter AUC65_00228 PF06161 AUC65_00228 AUC65_00229 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC65_00231 PF10263 AUC65_00231 AUC65_00232 PF01757 AUC65_00232 AUC65_00234 PF09851 AUC65_00234 AUC65_00235 PF01047 MarR family AUC65_00236 PF01297 Periplasmic solute binding protein family AUC65_00237 PF00005 ABC transporter AUC65_00238 PF00950 AUC65_00238 AUC65_00239 PF00005 ABC transporter AUC65_00239 PF12848 ABC transporter AUC65_00240 PF01554 MatE AUC65_00242 PF00392 Bacterial regulatory proteins, gntR family AUC65_00242 PF13377 Periplasmic binding protein-like domain AUC65_00243 PF04616 Glycosyl hydrolases family 43 AUC65_00244 PF01306 LacY proton/sugar symporter AUC65_00245 PF00149 Calcineurin-like phosphoesterase AUC65_00246 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_00246 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC65_00247 PF00596 Class II Aldolase and Adducin N-terminal domain AUC65_00248 PF02610 L-arabinose isomerase AUC65_00248 PF11762 L-arabinose isomerase C-terminal domain AUC65_00249 PF00248 Aldo/keto reductase family AUC65_00250 PF02661 Fic/DOC family AUC65_00253 PF01757 AUC65_00253 AUC65_00254 PF00083 Sugar (and other) transporter AUC65_00255 PF00005 ABC transporter AUC65_00256 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_00256 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00257 PF12850 Calcineurin-like phosphoesterase superfamily domain AUC65_00258 PF00583 Acetyltransferase (GNAT) family AUC65_00261 PF05043 Mga helix-turn-helix domain AUC65_00264 PF13641 Glycosyltransferase like family 2 AUC65_00265 PF01270 Glycosyl hydrolases family 8 AUC65_00266 PF02350 UDP-N-acetylglucosamine 2-epimerase AUC65_00267 PF04073 Aminoacyl-tRNA editing domain AUC65_00270 PF07690 Major Facilitator Superfamily AUC65_00271 PF02397 AUC65_00271 AUC65_00272 PF00392 Bacterial regulatory proteins, gntR family AUC65_00272 PF07702 UTRA domain AUC65_00273 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AUC65_00273 PF09363 XFP C-terminal domain AUC65_00273 PF09364 XFP N-terminal domain AUC65_00274 PF01943 AUC65_00274 AUC65_00275 PF04230 AUC65_00275 AUC65_00276 PF00535 Glycosyl transferase family 2 AUC65_00277 PF11380 AUC65_00277 AUC65_00277 PF17101 AUC65_00277 AUC65_00278 PF00535 Glycosyl transferase family 2 AUC65_00279 PF00535 Glycosyl transferase family 2 AUC65_00280 PF00535 Glycosyl transferase family 2 AUC65_00281 PF00535 Glycosyl transferase family 2 AUC65_00282 PF00665 Integrase core domain AUC65_00282 PF13276 AUC65_00282 AUC65_00283 PF01527 Transposase AUC65_00285 PF04230 AUC65_00285 AUC65_00286 PF01943 AUC65_00286 AUC65_00286 PF14667 Polysaccharide biosynthesis C-terminal domain AUC65_00287 PF16069 AUC65_00287 AUC65_00289 PF05128 AUC65_00289 AUC65_00291 PF04203 Sortase family AUC65_00293 PF01431 Peptidase family M13 AUC65_00293 PF05649 Peptidase family M13 AUC65_00294 PF00171 Aldehyde dehydrogenase family AUC65_00294 PF00465 Iron-containing alcohol dehydrogenase AUC65_00296 PF03372 Endonuclease/Exonuclease/phosphatase family AUC65_00297 PF02517 CAAX protease self-immunity AUC65_00300 PF00300 Histidine phosphatase superfamily (branch 1) AUC65_00301 PF01926 50S ribosome-binding GTPase AUC65_00301 PF13167 AUC65_00301 AUC65_00301 PF16360 AUC65_00301 AUC65_00302 PF02698 DUF218 domain AUC65_00304 PF00005 ABC transporter AUC65_00304 PF00664 ABC transporter transmembrane region AUC65_00305 PF00005 ABC transporter AUC65_00305 PF00664 ABC transporter transmembrane region AUC65_00310 PF14602 Hexapeptide repeat of succinyl-transferase AUC65_00311 PF06458 MucBP domain AUC65_00312 PF01238 Phosphomannose isomerase type I AUC65_00313 PF08245 Mur ligase middle domain AUC65_00313 PF08353 AUC65_00313 AUC65_00314 PF07685 CobB/CobQ-like glutamine amidotransferase domain AUC65_00316 PF00265 Thymidine kinase AUC65_00317 PF00472 RF-1 domain AUC65_00317 PF03462 PCRF domain AUC65_00318 PF05175 Methyltransferase small domain AUC65_00319 PF01300 Telomere recombination AUC65_00319 PF03481 Putative GTP-binding controlling metal-binding AUC65_00320 PF00464 Serine hydroxymethyltransferase AUC65_00321 PF14681 Uracil phosphoribosyltransferase AUC65_00322 PF13460 NADH(P)-binding AUC65_00323 PF01243 Pyridoxamine 5'-phosphate oxidase AUC65_00324 PF00860 Permease family AUC65_00325 PF00119 ATP synthase A chain AUC65_00326 PF00137 ATP synthase subunit C AUC65_00327 PF00430 ATP synthase B/B' CF(0) AUC65_00328 PF00213 ATP synthase delta (OSCP) subunit AUC65_00329 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUC65_00329 PF00306 ATP synthase alpha/beta chain, C terminal domain AUC65_00329 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUC65_00330 PF00231 ATP synthase AUC65_00331 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AUC65_00331 PF02874 ATP synthase alpha/beta family, beta-barrel domain AUC65_00332 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AUC65_00332 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AUC65_00333 PF02557 D-alanyl-D-alanine carboxypeptidase AUC65_00334 PF01712 Deoxynucleoside kinase AUC65_00335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC65_00335 PF02403 Seryl-tRNA synthetase N-terminal domain AUC65_00340 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) AUC65_00341 PF00004 ATPase family associated with various cellular activities (AAA) AUC65_00341 PF02861 Clp amino terminal domain AUC65_00341 PF07724 AAA domain (Cdc48 subfamily) AUC65_00341 PF10431 C-terminal, D2-small domain, of ClpB protein AUC65_00342 PF00562 RNA polymerase Rpb2, domain 6 AUC65_00342 PF04560 RNA polymerase Rpb2, domain 7 AUC65_00342 PF04561 RNA polymerase Rpb2, domain 2 AUC65_00342 PF04563 RNA polymerase beta subunit AUC65_00342 PF04565 RNA polymerase Rpb2, domain 3 AUC65_00342 PF10385 RNA polymerase beta subunit external 1 domain AUC65_00343 PF00623 RNA polymerase Rpb1, domain 2 AUC65_00343 PF04983 RNA polymerase Rpb1, domain 3 AUC65_00343 PF04997 RNA polymerase Rpb1, domain 1 AUC65_00343 PF04998 RNA polymerase Rpb1, domain 5 AUC65_00343 PF05000 RNA polymerase Rpb1, domain 4 AUC65_00346 PF00465 Iron-containing alcohol dehydrogenase AUC65_00348 PF00583 Acetyltransferase (GNAT) family AUC65_00349 PF05368 NmrA-like family AUC65_00350 PF00440 Bacterial regulatory proteins, tetR family AUC65_00351 PF13847 Methyltransferase domain AUC65_00352 PF01381 Helix-turn-helix AUC65_00354 PF00654 Voltage gated chloride channel AUC65_00356 PF01432 Peptidase family M3 AUC65_00356 PF08439 Oligopeptidase F AUC65_00357 PF00293 NUDIX domain AUC65_00359 PF13563 2'-5' RNA ligase superfamily AUC65_00360 PF01381 Helix-turn-helix AUC65_00361 PF12146 Putative lysophospholipase AUC65_00362 PF07690 Major Facilitator Superfamily AUC65_00363 PF03641 Possible lysine decarboxylase AUC65_00364 PF05175 Methyltransferase small domain AUC65_00365 PF14437 AUC65_00365 AUC65_00366 PF12169 DNA polymerase III subunits gamma and tau domain III AUC65_00366 PF13177 DNA polymerase III, delta subunit AUC65_00367 PF02575 YbaB/EbfC DNA-binding family AUC65_00368 PF02132 RecR protein AUC65_00368 PF13662 Toprim domain AUC65_00369 PF10704 AUC65_00369 AUC65_00371 PF02223 Thymidylate kinase AUC65_00372 PF06153 Protein of unknown function (DUF970) AUC65_00373 PF13177 DNA polymerase III, delta subunit AUC65_00374 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AUC65_00375 PF01643 Acyl-ACP thioesterase AUC65_00376 PF01370 NAD dependent epimerase/dehydratase family AUC65_00377 PF00814 Glycoprotease family AUC65_00378 PF00583 Acetyltransferase (GNAT) family AUC65_00379 PF00583 Acetyltransferase (GNAT) family AUC65_00380 PF00814 Glycoprotease family AUC65_00381 PF00348 Polyprenyl synthetase AUC65_00382 PF00338 Ribosomal protein S10p/S20e AUC65_00383 PF00297 Ribosomal protein L3 AUC65_00384 PF00573 Ribosomal protein L4/L1 family AUC65_00385 PF00276 Ribosomal protein L23 AUC65_00386 PF00181 Ribosomal Proteins L2, RNA binding domain AUC65_00386 PF03947 Ribosomal Proteins L2, C-terminal domain AUC65_00387 PF00203 Ribosomal protein S19 AUC65_00388 PF00237 Ribosomal protein L22p/L17e AUC65_00389 PF00189 Ribosomal protein S3, C-terminal domain AUC65_00389 PF07650 KH domain AUC65_00390 PF00252 Ribosomal protein L16p/L10e AUC65_00391 PF00831 Ribosomal L29 protein AUC65_00392 PF00366 Ribosomal protein S17 AUC65_00393 PF00238 Ribosomal protein L14p/L23e AUC65_00394 PF00467 KOW motif AUC65_00394 PF17136 AUC65_00394 AUC65_00395 PF00281 Ribosomal protein L5 AUC65_00395 PF00673 ribosomal L5P family C-terminus AUC65_00396 PF00410 Ribosomal protein S8 AUC65_00397 PF00347 Ribosomal protein L6 AUC65_00398 PF00861 Ribosomal L18p/L5e family AUC65_00399 PF00333 Ribosomal protein S5, N-terminal domain AUC65_00399 PF03719 Ribosomal protein S5, C-terminal domain AUC65_00400 PF00327 Ribosomal protein L30p/L7e AUC65_00401 PF00828 Ribosomal protein L18e/L15 AUC65_00402 PF00344 SecY translocase AUC65_00403 PF00406 Adenylate kinase AUC65_00404 PF01176 Translation initiation factor 1A / IF-1 AUC65_00405 PF00444 Ribosomal protein L36 AUC65_00406 PF00416 Ribosomal protein S13/S18 AUC65_00407 PF00411 Ribosomal protein S11 AUC65_00408 PF01000 RNA polymerase Rpb3/RpoA insert domain AUC65_00408 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AUC65_00408 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AUC65_00409 PF01196 Ribosomal protein L17 AUC65_00412 PF01145 SPFH domain / Band 7 family AUC65_00413 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00414 PF00005 ABC transporter AUC65_00414 PF09383 NIL domain AUC65_00415 PF03180 NLPA lipoprotein AUC65_00416 PF06912 AUC65_00416 AUC65_00417 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AUC65_00418 PF02540 NAD synthase AUC65_00419 PF03358 NADPH-dependent FMN reductase AUC65_00420 PF02424 ApbE family AUC65_00421 PF13596 PAS domain AUC65_00422 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC65_00422 PF03466 LysR substrate binding domain AUC65_00423 PF00206 Lyase AUC65_00423 PF10415 Fumarase C C-terminus AUC65_00424 PF00890 FAD binding domain AUC65_00425 PF00939 Sodium:sulfate symporter transmembrane region AUC65_00426 PF00056 lactate/malate dehydrogenase, NAD binding domain AUC65_00426 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUC65_00427 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AUC65_00427 PF00364 Biotin-requiring enzyme AUC65_00427 PF00682 HMGL-like AUC65_00427 PF02436 Conserved carboxylase domain AUC65_00427 PF02785 Biotin carboxylase C-terminal domain AUC65_00427 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_00428 PF01406 tRNA synthetases class I (C) catalytic domain AUC65_00428 PF09190 DALR domain AUC65_00429 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC65_00430 PF01717 Cobalamin-independent synthase, Catalytic domain AUC65_00431 PF03180 NLPA lipoprotein AUC65_00432 PF02664 S-Ribosylhomocysteinase (LuxS) AUC65_00433 PF00636 Ribonuclease III domain AUC65_00434 PF00588 SpoU rRNA Methylase family AUC65_00434 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC65_00436 PF00471 Ribosomal protein L33 AUC65_00437 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AUC65_00438 PF00467 KOW motif AUC65_00438 PF02357 Transcription termination factor nusG AUC65_00439 PF00298 Ribosomal protein L11, RNA binding domain AUC65_00439 PF03946 Ribosomal protein L11, N-terminal domain AUC65_00440 PF00687 Ribosomal protein L1p/L10e family AUC65_00441 PF00466 Ribosomal protein L10 AUC65_00442 PF00542 Ribosomal protein L7/L12 C-terminal domain AUC65_00442 PF16320 AUC65_00442 AUC65_00443 PF13354 Beta-lactamase enzyme family AUC65_00444 PF00005 ABC transporter AUC65_00445 PF00950 AUC65_00445 AUC65_00446 PF01297 Periplasmic solute binding protein family AUC65_00447 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_00448 PF00588 SpoU rRNA Methylase family AUC65_00449 PF00005 ABC transporter AUC65_00450 PF00005 ABC transporter AUC65_00451 PF02361 Cobalt transport protein AUC65_00452 PF01416 tRNA pseudouridine synthase AUC65_00453 PF00572 Ribosomal protein L13 AUC65_00454 PF00380 Ribosomal protein S9/S16 AUC65_00455 PF00106 short chain dehydrogenase AUC65_00457 PF00144 Beta-lactamase AUC65_00458 PF00205 Thiamine pyrophosphate enzyme, central domain AUC65_00458 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC65_00458 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC65_00461 PF03167 Uracil DNA glycosylase superfamily AUC65_00462 PF12799 Leucine Rich repeats (2 copies) AUC65_00463 PF00248 Aldo/keto reductase family AUC65_00464 PF00128 Alpha amylase, catalytic domain AUC65_00465 PF01935 Domain of unknown function DUF87 AUC65_00466 PF05872 AUC65_00466 AUC65_00467 PF01569 PAP2 superfamily AUC65_00469 PF07690 Major Facilitator Superfamily AUC65_00470 PF00005 ABC transporter AUC65_00472 PF03668 AUC65_00472 AUC65_00473 PF01933 Uncharacterised protein family UPF0052 AUC65_00474 PF02650 WhiA C-terminal HTH domain AUC65_00474 PF10298 WhiA N-terminal LAGLIDADG-like domain AUC65_00474 PF14527 WhiA LAGLIDADG-like domain AUC65_00475 PF00574 Clp protease AUC65_00476 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC65_00476 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC65_00477 PF13303 AUC65_00477 AUC65_00478 PF00367 phosphotransferase system, EIIB AUC65_00479 PF01783 Ribosomal L32p protein family AUC65_00480 PF01566 AUC65_00480 AUC65_00481 PF00582 Universal stress protein family AUC65_00482 PF01047 MarR family AUC65_00484 PF00056 lactate/malate dehydrogenase, NAD binding domain AUC65_00484 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUC65_00485 PF00205 Thiamine pyrophosphate enzyme, central domain AUC65_00485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC65_00485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC65_00486 PF03306 Alpha-acetolactate decarboxylase AUC65_00487 PF00107 Zinc-binding dehydrogenase AUC65_00487 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_00488 PF01476 LysM domain AUC65_00488 PF05257 CHAP domain AUC65_00489 PF00877 NlpC/P60 family AUC65_00490 PF14542 GCN5-related N-acetyl-transferase AUC65_00491 PF00692 dUTPase AUC65_00492 PF13481 AAA domain AUC65_00492 PF13541 Subunit ChlI of Mg-chelatase AUC65_00493 PF01850 PIN domain AUC65_00494 PF00749 tRNA synthetases class I (E and Q), catalytic domain AUC65_00495 PF01043 SecA preprotein cross-linking domain AUC65_00495 PF07516 SecA Wing and Scaffold domain AUC65_00495 PF07517 SecA DEAD-like domain AUC65_00496 PF00472 RF-1 domain AUC65_00496 PF03462 PCRF domain AUC65_00497 PF07681 AUC65_00497 AUC65_00499 PF02388 FemAB family AUC65_00500 PF00588 SpoU rRNA Methylase family AUC65_00500 PF08032 RNA 2'-O ribose methyltransferase substrate binding AUC65_00501 PF01966 HD domain AUC65_00502 PF01638 HxlR-like helix-turn-helix AUC65_00503 PF01409 tRNA synthetases class II core domain (F) AUC65_00503 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AUC65_00504 PF01588 Putative tRNA binding domain AUC65_00504 PF03147 Ferredoxin-fold anticodon binding domain AUC65_00504 PF03483 B3/4 domain AUC65_00504 PF03484 tRNA synthetase B5 domain AUC65_00505 PF02618 YceG-like family AUC65_00506 PF00270 DEAD/DEAH box helicase AUC65_00506 PF00271 Helicase conserved C-terminal domain AUC65_00506 PF00570 HRDC domain AUC65_00506 PF09382 RQC domain AUC65_00506 PF16124 AUC65_00506 AUC65_00507 PF01272 Transcription elongation factor, GreA/GreB, C-term AUC65_00507 PF03449 Transcription elongation factor, N-terminal AUC65_00508 PF09586 AUC65_00508 AUC65_00509 PF00905 Penicillin binding protein transpeptidase domain AUC65_00509 PF03717 Penicillin-binding Protein dimerisation domain AUC65_00510 PF01812 5-formyltetrahydrofolate cyclo-ligase family AUC65_00511 PF01694 Rhomboid family AUC65_00512 PF06014 Bacterial protein of unknown function (DUF910) AUC65_00513 PF00480 ROK family AUC65_00514 PF01476 LysM domain AUC65_00514 PF05257 CHAP domain AUC65_00515 PF01476 LysM domain AUC65_00515 PF05257 CHAP domain AUC65_00516 PF00188 Cysteine-rich secretory protein family AUC65_00516 PF01476 LysM domain AUC65_00517 PF00581 Rhodanese-like domain AUC65_00518 PF11240 AUC65_00518 AUC65_00519 PF03009 Glycerophosphoryl diester phosphodiesterase family AUC65_00520 PF01715 IPP transferase AUC65_00521 PF13411 MerR HTH family regulatory protein AUC65_00522 PF00120 Glutamine synthetase, catalytic domain AUC65_00522 PF03951 Glutamine synthetase, beta-Grasp domain AUC65_00527 PF00829 Ribosomal prokaryotic L21 protein AUC65_00528 PF01016 Ribosomal L27 protein AUC65_00529 PF00933 Glycosyl hydrolase family 3 N terminal domain AUC65_00529 PF01915 Glycosyl hydrolase family 3 C-terminal domain AUC65_00529 PF14310 Fibronectin type III-like domain AUC65_00531 PF00005 ABC transporter AUC65_00531 PF00664 ABC transporter transmembrane region AUC65_00532 PF00881 Nitroreductase family AUC65_00533 PF00425 chorismate binding enzyme AUC65_00534 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC65_00534 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC65_00534 PF16582 AUC65_00534 AUC65_00535 PF12697 Alpha/beta hydrolase family AUC65_00536 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AUC65_00536 PF13378 Enolase C-terminal domain-like AUC65_00537 PF00557 Metallopeptidase family M24 AUC65_00537 PF01321 Creatinase/Prolidase N-terminal domain AUC65_00539 PF12850 Calcineurin-like phosphoesterase superfamily domain AUC65_00540 PF00149 Calcineurin-like phosphoesterase AUC65_00540 PF02872 5'-nucleotidase, C-terminal domain AUC65_00541 PF06265 Protein of unknown function (DUF1027) AUC65_00542 PF13242 HAD-hyrolase-like AUC65_00542 PF13344 Haloacid dehalogenase-like hydrolase AUC65_00543 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_00544 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC65_00544 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC65_00545 PF01156 Inosine-uridine preferring nucleoside hydrolase AUC65_00548 PF12849 PBP superfamily domain AUC65_00549 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00550 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00551 PF00005 ABC transporter AUC65_00552 PF00005 ABC transporter AUC65_00553 PF01895 PhoU domain AUC65_00554 PF02631 RecX family AUC65_00556 PF06030 AUC65_00556 AUC65_00556 PF11797 AUC65_00556 AUC65_00557 PF04167 Protein of unknown function (DUF402) AUC65_00559 PF00009 Elongation factor Tu GTP binding domain AUC65_00559 PF03144 Elongation factor Tu domain 2 AUC65_00559 PF16658 AUC65_00559 AUC65_00561 PF07997 Protein of unknown function (DUF1694) AUC65_00563 PF00004 ATPase family associated with various cellular activities (AAA) AUC65_00563 PF12002 MgsA AAA+ ATPase C terminal AUC65_00563 PF16193 AUC65_00563 AUC65_00565 PF00582 Universal stress protein family AUC65_00568 PF06030 AUC65_00568 AUC65_00568 PF11797 AUC65_00568 AUC65_00570 PF06030 AUC65_00570 AUC65_00570 PF11797 AUC65_00570 AUC65_00572 PF06030 AUC65_00572 AUC65_00572 PF11797 AUC65_00572 AUC65_00574 PF06030 AUC65_00574 AUC65_00574 PF11797 AUC65_00574 AUC65_00577 PF06030 AUC65_00577 AUC65_00577 PF11797 AUC65_00577 AUC65_00579 PF06030 AUC65_00579 AUC65_00579 PF11797 AUC65_00579 AUC65_00585 PF03006 AUC65_00585 AUC65_00586 PF01810 AUC65_00586 AUC65_00587 PF14552 Tautomerase enzyme AUC65_00592 PF00133 tRNA synthetases class I (I, L, M and V) AUC65_00592 PF08264 Anticodon-binding domain of tRNA AUC65_00592 PF10458 Valyl tRNA synthetase tRNA binding arm AUC65_00593 PF00413 Matrixin AUC65_00594 PF02875 Mur ligase family, glutamate ligase domain AUC65_00594 PF08245 Mur ligase middle domain AUC65_00595 PF00534 Glycosyl transferases group 1 AUC65_00598 PF00005 ABC transporter AUC65_00598 PF12848 ABC transporter AUC65_00598 PF16326 AUC65_00598 AUC65_00599 PF00166 Chaperonin 10 Kd subunit AUC65_00600 PF00118 TCP-1/cpn60 chaperonin family AUC65_00601 PF13520 Amino acid permease AUC65_00602 PF10978 AUC65_00602 AUC65_00603 PF01820 D-ala D-ala ligase N-terminus AUC65_00603 PF07478 D-ala D-ala ligase C-terminus AUC65_00604 PF13242 HAD-hyrolase-like AUC65_00605 PF01926 50S ribosome-binding GTPase AUC65_00606 PF01985 CRS1 / YhbY (CRM) domain AUC65_00607 PF01467 Cytidylyltransferase AUC65_00608 PF01966 HD domain AUC65_00609 PF02410 Oligomerisation domain AUC65_00610 PF13649 Methyltransferase domain AUC65_00611 PF05636 HIGH Nucleotidyl Transferase AUC65_00612 PF02620 AUC65_00612 AUC65_00613 PF00488 MutS domain V AUC65_00613 PF01624 MutS domain I AUC65_00613 PF05188 MutS domain II AUC65_00613 PF05190 MutS family domain IV AUC65_00613 PF05192 MutS domain III AUC65_00614 PF01119 DNA mismatch repair protein, C-terminal domain AUC65_00614 PF08676 MutL C terminal dimerisation domain AUC65_00614 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_00615 PF00258 Flavodoxin AUC65_00617 PF00413 Matrixin AUC65_00627 PF00746 AUC65_00627 AUC65_00629 PF06030 AUC65_00629 AUC65_00629 PF11797 AUC65_00629 AUC65_00630 PF13731 AUC65_00630 AUC65_00634 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC65_00634 PF02824 TGS domain AUC65_00634 PF03129 Anticodon binding domain AUC65_00634 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUC65_00635 PF04203 Sortase family AUC65_00636 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AUC65_00637 PF00216 Bacterial DNA-binding protein AUC65_00639 PF02687 AUC65_00639 AUC65_00640 PF00005 ABC transporter AUC65_00643 PF07155 ECF-type riboflavin transporter, S component AUC65_00644 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AUC65_00644 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AUC65_00645 PF02601 AUC65_00645 AUC65_00645 PF13742 AUC65_00645 AUC65_00646 PF02609 Exonuclease VII small subunit AUC65_00647 PF00348 Polyprenyl synthetase AUC65_00648 PF01728 FtsJ-like methyltransferase AUC65_00649 PF01316 Arginine repressor, DNA binding domain AUC65_00649 PF02863 Arginine repressor, C-terminal domain AUC65_00650 PF02463 RecF/RecN/SMC N terminal domain AUC65_00651 PF01734 Patatin-like phospholipase AUC65_00652 PF00625 Guanylate kinase AUC65_00653 PF01192 RNA polymerase Rpb6 AUC65_00654 PF09335 AUC65_00654 AUC65_00655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC65_00656 PF00575 S1 RNA binding domain AUC65_00677 PF01381 Helix-turn-helix AUC65_00678 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC65_00678 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC65_00679 PF12822 Protein of unknown function (DUF3816) AUC65_00680 PF01654 AUC65_00680 AUC65_00681 PF02322 AUC65_00681 AUC65_00682 PF00005 ABC transporter AUC65_00682 PF00664 ABC transporter transmembrane region AUC65_00683 PF00005 ABC transporter AUC65_00684 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AUC65_00685 PF02222 ATP-grasp domain AUC65_00686 PF13253 AUC65_00686 AUC65_00687 PF11877 AUC65_00687 AUC65_00688 PF00313 'Cold-shock' DNA-binding domain AUC65_00689 PF00293 NUDIX domain AUC65_00691 PF01048 Phosphorylase superfamily AUC65_00692 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC65_00693 PF02230 Phospholipase/Carboxylesterase AUC65_00694 PF08866 Putative amino acid metabolism AUC65_00695 PF01476 LysM domain AUC65_00698 PF07972 NrdI Flavodoxin like AUC65_00699 PF00462 Glutaredoxin AUC65_00700 PF00317 Ribonucleotide reductase, all-alpha domain AUC65_00700 PF02867 Ribonucleotide reductase, barrel domain AUC65_00700 PF08343 Ribonucleotide reductase N-terminal AUC65_00701 PF00268 Ribonucleotide reductase, small chain AUC65_00702 PF04392 ABC transporter substrate binding protein AUC65_00703 PF02653 AUC65_00703 AUC65_00704 PF00005 ABC transporter AUC65_00705 PF00654 Voltage gated chloride channel AUC65_00705 PF02080 TrkA-C domain AUC65_00706 PF02537 AUC65_00706 AUC65_00707 PF02537 AUC65_00707 AUC65_00708 PF02645 Uncharacterised protein, DegV family COG1307 AUC65_00709 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AUC65_00709 PF00367 phosphotransferase system, EIIB AUC65_00709 PF02378 Phosphotransferase system, EIIC AUC65_00712 PF04002 RadC-like JAB domain AUC65_00713 PF06723 MreB/Mbl protein AUC65_00714 PF04085 rod shape-determining protein MreC AUC65_00715 PF00194 Eukaryotic-type carbonic anhydrase AUC65_00716 PF04093 AUC65_00716 AUC65_00717 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_00718 PF00005 ABC transporter AUC65_00719 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_00720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AUC65_00721 PF00731 AIR carboxylase AUC65_00722 PF02222 ATP-grasp domain AUC65_00722 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC65_00723 PF01259 SAICAR synthetase AUC65_00724 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AUC65_00725 PF13507 CobB/CobQ-like glutamine amidotransferase domain AUC65_00726 PF00586 AIR synthase related protein, N-terminal domain AUC65_00726 PF02769 AIR synthase related protein, C-terminal domain AUC65_00727 PF00156 Phosphoribosyl transferase domain AUC65_00727 PF13537 Glutamine amidotransferase domain AUC65_00728 PF00586 AIR synthase related protein, N-terminal domain AUC65_00728 PF02769 AIR synthase related protein, C-terminal domain AUC65_00729 PF00551 Formyl transferase AUC65_00730 PF01808 AICARFT/IMPCHase bienzyme AUC65_00730 PF02142 MGS-like domain AUC65_00731 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AUC65_00731 PF02843 Phosphoribosylglycinamide synthetase, C domain AUC65_00731 PF02844 Phosphoribosylglycinamide synthetase, N domain AUC65_00732 PF01268 Formate--tetrahydrofolate ligase AUC65_00735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_00735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_00737 PF13302 Acetyltransferase (GNAT) domain AUC65_00738 PF00324 Amino acid permease AUC65_00739 PF00224 Pyruvate kinase, barrel domain AUC65_00739 PF02887 Pyruvate kinase, alpha/beta domain AUC65_00740 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AUC65_00741 PF04452 RNA methyltransferase AUC65_00743 PF02381 MraZ protein AUC65_00744 PF01795 MraW methylase family AUC65_00745 PF04977 Septum formation initiator AUC65_00746 PF00905 Penicillin binding protein transpeptidase domain AUC65_00746 PF03717 Penicillin-binding Protein dimerisation domain AUC65_00746 PF03793 PASTA domain AUC65_00747 PF00953 Glycosyl transferase family 4 AUC65_00748 PF02875 Mur ligase family, glutamate ligase domain AUC65_00748 PF08245 Mur ligase middle domain AUC65_00749 PF03033 Glycosyltransferase family 28 N-terminal domain AUC65_00749 PF04101 Glycosyltransferase family 28 C-terminal domain AUC65_00750 PF03799 Cell division protein FtsQ AUC65_00750 PF08478 POTRA domain, FtsQ-type AUC65_00751 PF02491 SHS2 domain inserted in FTSA AUC65_00751 PF14450 Cell division protein FtsA AUC65_00752 PF00091 Tubulin/FtsZ family, GTPase domain AUC65_00752 PF12327 FtsZ family, C-terminal domain AUC65_00753 PF04472 Protein of unknown function (DUF552) AUC65_00754 PF02325 AUC65_00754 AUC65_00755 PF01479 S4 domain AUC65_00756 PF05103 DivIVA protein AUC65_00757 PF00133 tRNA synthetases class I (I, L, M and V) AUC65_00757 PF08264 Anticodon-binding domain of tRNA AUC65_00758 PF00300 Histidine phosphatase superfamily (branch 1) AUC65_00760 PF13538 UvrD-like helicase C-terminal domain AUC65_00760 PF13604 AAA domain AUC65_00760 PF14490 Helix-hairpin-helix containing domain AUC65_00761 PF01709 Transcriptional regulator AUC65_00762 PF00860 Permease family AUC65_00763 PF00437 Type II/IV secretion system protein AUC65_00764 PF00482 Type II secretion system (T2SS), protein F AUC65_00765 PF07963 Prokaryotic N-terminal methylation motif AUC65_00770 PF02384 N-6 DNA Methylase AUC65_00771 PF00871 Acetokinase family AUC65_00772 PF00271 Helicase conserved C-terminal domain AUC65_00772 PF04851 Type III restriction enzyme, res subunit AUC65_00773 PF00551 Formyl transferase AUC65_00773 PF02911 Formyl transferase, C-terminal domain AUC65_00774 PF01029 NusB family AUC65_00774 PF01189 NOL1/NOP2/sun family AUC65_00775 PF13672 Protein phosphatase 2C AUC65_00776 PF00069 Protein kinase domain AUC65_00776 PF03793 PASTA domain AUC65_00777 PF03193 Protein of unknown function, DUF258 AUC65_00777 PF16745 AUC65_00777 AUC65_00778 PF00834 Ribulose-phosphate 3 epimerase family AUC65_00779 PF04263 Thiamin pyrophosphokinase, catalytic domain AUC65_00779 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AUC65_00780 PF00830 Ribosomal L28 family AUC65_00781 PF03780 AUC65_00781 AUC65_00782 PF02734 DAK2 domain AUC65_00782 PF13684 Dihydroxyacetone kinase family AUC65_00784 PF00746 AUC65_00784 AUC65_00785 PF00534 Glycosyl transferases group 1 AUC65_00787 PF00270 DEAD/DEAH box helicase AUC65_00787 PF00271 Helicase conserved C-terminal domain AUC65_00787 PF17191 AUC65_00787 AUC65_00788 PF02504 Fatty acid synthesis protein AUC65_00789 PF00550 Phosphopantetheine attachment site AUC65_00790 PF00035 Double-stranded RNA binding motif AUC65_00790 PF14622 Ribonuclease-III-like AUC65_00791 PF02463 RecF/RecN/SMC N terminal domain AUC65_00791 PF06470 SMC proteins Flexible Hinge Domain AUC65_00792 PF00448 SRP54-type protein, GTPase domain AUC65_00792 PF02881 SRP54-type protein, helical bundle domain AUC65_00793 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AUC65_00794 PF00448 SRP54-type protein, GTPase domain AUC65_00794 PF02881 SRP54-type protein, helical bundle domain AUC65_00794 PF02978 Signal peptide binding domain AUC65_00798 PF00886 Ribosomal protein S16 AUC65_00799 PF03741 AUC65_00799 AUC65_00800 PF01145 SPFH domain / Band 7 family AUC65_00802 PF00300 Histidine phosphatase superfamily (branch 1) AUC65_00803 PF01782 RimM N-terminal domain AUC65_00803 PF05239 PRC-barrel domain AUC65_00804 PF01746 tRNA (Guanine-1)-methyltransferase AUC65_00805 PF01245 Ribosomal protein L19 AUC65_00806 PF00375 Sodium:dicarboxylate symporter family AUC65_00807 PF02588 AUC65_00807 AUC65_00807 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC65_00808 PF01361 Tautomerase enzyme AUC65_00809 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_00809 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC65_00810 PF00877 NlpC/P60 family AUC65_00810 PF01476 LysM domain AUC65_00811 PF01712 Deoxynucleoside kinase AUC65_00812 PF01741 Large-conductance mechanosensitive channel, MscL AUC65_00813 PF08282 haloacid dehalogenase-like hydrolase AUC65_00815 PF02517 CAAX protease self-immunity AUC65_00817 PF01521 Iron-sulphur cluster biosynthesis AUC65_00818 PF03992 Antibiotic biosynthesis monooxygenase AUC65_00820 PF05043 Mga helix-turn-helix domain AUC65_00821 PF13731 AUC65_00821 AUC65_00822 PF06030 AUC65_00822 AUC65_00822 PF11797 AUC65_00822 AUC65_00823 PF13731 AUC65_00823 AUC65_00824 PF06030 AUC65_00824 AUC65_00824 PF11797 AUC65_00824 AUC65_00825 PF10112 AUC65_00825 AUC65_00826 PF05816 AUC65_00826 AUC65_00827 PF03960 ArsC family AUC65_00828 PF05389 Negative regulator of genetic competence (MecA) AUC65_00829 PF00232 Glycosyl hydrolase family 1 AUC65_00830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AUC65_00831 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AUC65_00832 PF00232 Glycosyl hydrolase family 1 AUC65_00833 PF02378 Phosphotransferase system, EIIC AUC65_00834 PF06054 AUC65_00834 AUC65_00835 PF01432 Peptidase family M3 AUC65_00835 PF08439 Oligopeptidase F AUC65_00836 PF00230 Major intrinsic protein AUC65_00837 PF06103 AUC65_00837 AUC65_00839 PF00356 Bacterial regulatory proteins, lacI family AUC65_00839 PF13377 Periplasmic binding protein-like domain AUC65_00840 PF00557 Metallopeptidase family M24 AUC65_00840 PF01321 Creatinase/Prolidase N-terminal domain AUC65_00842 PF07690 Major Facilitator Superfamily AUC65_00844 PF01370 NAD dependent epimerase/dehydratase family AUC65_00849 PF05043 Mga helix-turn-helix domain AUC65_00851 PF13731 AUC65_00851 AUC65_00852 PF06030 AUC65_00852 AUC65_00852 PF11797 AUC65_00852 AUC65_00854 PF02441 Flavoprotein AUC65_00854 PF04127 DNA / pantothenate metabolism flavoprotein AUC65_00855 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AUC65_00855 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AUC65_00857 PF05014 Nucleoside 2-deoxyribosyltransferase AUC65_00858 PF01520 N-acetylmuramoyl-L-alanine amidase AUC65_00858 PF08239 Bacterial SH3 domain AUC65_00859 PF03129 Anticodon binding domain AUC65_00859 PF13393 Histidyl-tRNA synthetase AUC65_00860 PF00152 tRNA synthetases class II (D, K and N) AUC65_00860 PF01336 OB-fold nucleic acid binding domain AUC65_00860 PF02938 GAD domain AUC65_00861 PF00746 AUC65_00861 AUC65_00862 PF02588 AUC65_00862 AUC65_00862 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC65_00863 PF01165 Ribosomal protein S21 AUC65_00864 PF09424 Yqey-like protein AUC65_00865 PF02562 PhoH-like protein AUC65_00866 PF02130 Uncharacterized protein family UPF0054 AUC65_00867 PF01219 Prokaryotic diacylglycerol kinase AUC65_00868 PF01926 50S ribosome-binding GTPase AUC65_00868 PF07650 KH domain AUC65_00869 PF02565 Recombination protein O C terminal AUC65_00869 PF11967 Recombination protein O N terminal AUC65_00871 PF04973 AUC65_00871 AUC65_00872 PF02091 Glycyl-tRNA synthetase alpha subunit AUC65_00873 PF02092 AUC65_00873 AUC65_00874 PF12695 Alpha/beta hydrolase family AUC65_00875 PF03741 AUC65_00875 AUC65_00876 PF01042 Endoribonuclease L-PSP AUC65_00877 PF10282 Lactonase, 7-bladed beta-propeller AUC65_00878 PF01594 AUC65_00878 AUC65_00879 PF00588 SpoU rRNA Methylase family AUC65_00880 PF01580 FtsK/SpoIIIE family AUC65_00880 PF09397 Ftsk gamma domain AUC65_00882 PF00005 ABC transporter AUC65_00882 PF13732 AUC65_00882 AUC65_00883 PF12698 ABC-2 family transporter protein AUC65_00886 PF01541 GIY-YIG catalytic domain AUC65_00886 PF02151 UvrB/uvrC motif AUC65_00886 PF08459 UvrC Helix-hairpin-helix N-terminal AUC65_00886 PF14520 Helix-hairpin-helix domain AUC65_00887 PF01018 GTP1/OBG AUC65_00887 PF01926 50S ribosome-binding GTPase AUC65_00887 PF09269 Domain of unknown function (DUF1967) AUC65_00888 PF01205 Uncharacterized protein family UPF0029 AUC65_00888 PF09186 Domain of unknown function (DUF1949) AUC65_00889 PF07099 AUC65_00889 AUC65_00890 PF00083 Sugar (and other) transporter AUC65_00890 PF07690 Major Facilitator Superfamily AUC65_00891 PF00478 IMP dehydrogenase / GMP reductase domain AUC65_00892 PF00478 IMP dehydrogenase / GMP reductase domain AUC65_00893 PF01979 Amidohydrolase family AUC65_00893 PF13382 Adenine deaminase C-terminal domain AUC65_00894 PF01330 RuvA N terminal domain AUC65_00894 PF07499 RuvA, C-terminal domain AUC65_00894 PF14520 Helix-hairpin-helix domain AUC65_00895 PF05491 Holliday junction DNA helicase ruvB C-terminus AUC65_00895 PF05496 Holliday junction DNA helicase ruvB N-terminus AUC65_00896 PF02547 Queuosine biosynthesis protein AUC65_00903 PF01702 Queuine tRNA-ribosyltransferase AUC65_00904 PF02699 Preprotein translocase subunit AUC65_00905 PF00817 impB/mucB/samB family AUC65_00905 PF11798 IMS family HHH motif AUC65_00905 PF11799 impB/mucB/samB family C-terminal domain AUC65_00906 PF01368 DHH family AUC65_00906 PF02272 DHHA1 domain AUC65_00907 PF00270 DEAD/DEAH box helicase AUC65_00907 PF00271 Helicase conserved C-terminal domain AUC65_00909 PF02595 Glycerate kinase family AUC65_00910 PF01411 tRNA synthetases class II (A) AUC65_00910 PF02272 DHHA1 domain AUC65_00910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AUC65_00911 PF06135 AUC65_00911 AUC65_00912 PF03652 Uncharacterised protein family (UPF0081) AUC65_00913 PF06949 AUC65_00913 AUC65_00914 PF06949 AUC65_00914 AUC65_00915 PF10531 SLBB domain AUC65_00915 PF12836 Helix-hairpin-helix motif AUC65_00916 PF00753 Metallo-beta-lactamase superfamily AUC65_00916 PF03772 AUC65_00916 AUC65_00917 PF06144 DNA polymerase III, delta subunit AUC65_00918 PF00312 Ribosomal protein S15 AUC65_00919 PF01649 Ribosomal protein S20 AUC65_00920 PF00753 Metallo-beta-lactamase superfamily AUC65_00920 PF07521 RNA-metabolising metallo-beta-lactamase AUC65_00922 PF00009 Elongation factor Tu GTP binding domain AUC65_00922 PF03143 Elongation factor Tu C-terminal domain AUC65_00922 PF03144 Elongation factor Tu domain 2 AUC65_00923 PF05014 Nucleoside 2-deoxyribosyltransferase AUC65_00924 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AUC65_00924 PF05697 Bacterial trigger factor protein (TF) AUC65_00924 PF05698 Bacterial trigger factor protein (TF) C-terminus AUC65_00925 PF06689 ClpX C4-type zinc finger AUC65_00925 PF07724 AAA domain (Cdc48 subfamily) AUC65_00925 PF10431 C-terminal, D2-small domain, of ClpB protein AUC65_00926 PF01926 50S ribosome-binding GTPase AUC65_00928 PF05164 Cell division protein ZapA AUC65_00929 PF02674 AUC65_00929 AUC65_00930 PF00488 MutS domain V AUC65_00930 PF01713 Smr domain AUC65_00931 PF01243 Pyridoxamine 5'-phosphate oxidase AUC65_00934 PF00085 Thioredoxin AUC65_00935 PF00204 DNA gyrase B AUC65_00935 PF00986 DNA gyrase B subunit, carboxyl terminus AUC65_00935 PF01751 Toprim domain AUC65_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_00936 PF00521 DNA gyrase/topoisomerase IV, subunit A AUC65_00937 PF03306 Alpha-acetolactate decarboxylase AUC65_00939 PF01546 Peptidase family M20/M25/M40 AUC65_00939 PF07687 Peptidase dimerisation domain AUC65_00940 PF07690 Major Facilitator Superfamily AUC65_00942 PF13538 UvrD-like helicase C-terminal domain AUC65_00942 PF13604 AAA domain AUC65_00942 PF14559 Tetratricopeptide repeat AUC65_00945 PF03496 ADP-ribosyltransferase exoenzyme AUC65_00946 PF02698 DUF218 domain AUC65_00947 PF04973 AUC65_00947 AUC65_00954 PF11611 Domain of unknown function (DUF4352) AUC65_00955 PF01565 FAD binding domain AUC65_00956 PF02913 FAD linked oxidases, C-terminal domain AUC65_00957 PF02503 Polyphosphate kinase middle domain AUC65_00957 PF13089 Polyphosphate kinase N-terminal domain AUC65_00957 PF13090 Polyphosphate kinase C-terminal domain AUC65_00958 PF02541 Ppx/GppA phosphatase family AUC65_00959 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_00959 PF13602 Zinc-binding dehydrogenase AUC65_00961 PF04851 Type III restriction enzyme, res subunit AUC65_00961 PF10544 AUC65_00961 AUC65_00962 PF07669 Eco57I restriction-modification methylase AUC65_00963 PF00665 Integrase core domain AUC65_00963 PF13276 AUC65_00963 AUC65_00964 PF01527 Transposase AUC65_00968 PF09848 Uncharacterized conserved protein (DUF2075) AUC65_00969 PF00270 DEAD/DEAH box helicase AUC65_00969 PF00271 Helicase conserved C-terminal domain AUC65_00971 PF01527 Transposase AUC65_00972 PF00665 Integrase core domain AUC65_00972 PF13276 AUC65_00972 AUC65_00975 PF00465 Iron-containing alcohol dehydrogenase AUC65_00978 PF01565 FAD binding domain AUC65_00978 PF02913 FAD linked oxidases, C-terminal domain AUC65_00979 PF00155 Aminotransferase class I and II AUC65_00980 PF00056 lactate/malate dehydrogenase, NAD binding domain AUC65_00980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUC65_00981 PF03180 NLPA lipoprotein AUC65_00982 PF03180 NLPA lipoprotein AUC65_00985 PF02110 Hydroxyethylthiazole kinase family AUC65_00986 PF08543 Phosphomethylpyrimidine kinase AUC65_00987 PF02581 Thiamine monophosphate synthase/TENI AUC65_00988 PF03070 TENA/THI-4/PQQC family AUC65_00992 PF00106 short chain dehydrogenase AUC65_00994 PF00480 ROK family AUC65_01010 PF13419 Haloacid dehalogenase-like hydrolase AUC65_01011 PF01177 Asp/Glu/Hydantoin racemase AUC65_01012 PF01725 Ham1 family AUC65_01013 PF12850 Calcineurin-like phosphoesterase superfamily domain AUC65_01014 PF13743 Thioredoxin AUC65_01015 PF04607 Region found in RelA / SpoT proteins AUC65_01016 PF01513 ATP-NAD kinase AUC65_01017 PF00849 RNA pseudouridylate synthase AUC65_01018 PF00571 CBS domain AUC65_01018 PF01769 Divalent cation transporter AUC65_01018 PF03448 MgtE intracellular N domain AUC65_01019 PF07690 Major Facilitator Superfamily AUC65_01020 PF01987 Mitochondrial biogenesis AIM24 AUC65_01021 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC65_01023 PF00005 ABC transporter AUC65_01024 PF00005 ABC transporter AUC65_01025 PF09862 AUC65_01025 AUC65_01027 PF03992 Antibiotic biosynthesis monooxygenase AUC65_01029 PF04237 YjbR AUC65_01031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC65_01031 PF03466 LysR substrate binding domain AUC65_01032 PF10012 AUC65_01032 AUC65_01033 PF00248 Aldo/keto reductase family AUC65_01034 PF02627 Carboxymuconolactone decarboxylase family AUC65_01035 PF07883 Cupin domain AUC65_01036 PF01047 MarR family AUC65_01037 PF00583 Acetyltransferase (GNAT) family AUC65_01038 PF09848 Uncharacterized conserved protein (DUF2075) AUC65_01039 PF02661 Fic/DOC family AUC65_01040 PF01545 Cation efflux family AUC65_01041 PF01022 Bacterial regulatory protein, arsR family AUC65_01044 PF02517 CAAX protease self-immunity AUC65_01046 PF01810 AUC65_01046 AUC65_01047 PF02567 Phenazine biosynthesis-like protein AUC65_01048 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AUC65_01048 PF00367 phosphotransferase system, EIIB AUC65_01048 PF02378 Phosphotransferase system, EIIC AUC65_01049 PF00251 Glycosyl hydrolases family 32 N-terminal domain AUC65_01050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUC65_01051 PF02153 Prephenate dehydrogenase AUC65_01052 PF01202 Shikimate kinase AUC65_01052 PF01817 Chorismate mutase type II AUC65_01053 PF07690 Major Facilitator Superfamily AUC65_01054 PF01264 Chorismate synthase AUC65_01058 PF05043 Mga helix-turn-helix domain AUC65_01060 PF07690 Major Facilitator Superfamily AUC65_01061 PF01070 FMN-dependent dehydrogenase AUC65_01062 PF13673 Acetyltransferase (GNAT) domain AUC65_01064 PF02576 Uncharacterised BCR, YhbC family COG0779 AUC65_01064 PF17384 AUC65_01064 AUC65_01065 PF08529 NusA N-terminal domain AUC65_01065 PF13184 NusA-like KH domain AUC65_01066 PF04296 Protein of unknown function (DUF448) AUC65_01067 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AUC65_01068 PF00009 Elongation factor Tu GTP binding domain AUC65_01068 PF04760 Translation initiation factor IF-2, N-terminal region AUC65_01068 PF11987 Translation-initiation factor 2 AUC65_01069 PF02033 Ribosome-binding factor A AUC65_01070 PF01509 TruB family pseudouridylate synthase (N terminal domain) AUC65_01070 PF16198 AUC65_01070 AUC65_01071 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01072 PF13930 DNA/RNA non-specific endonuclease AUC65_01073 PF01687 Riboflavin kinase AUC65_01073 PF06574 FAD synthetase AUC65_01074 PF05670 AUC65_01074 AUC65_01074 PF05833 Fibronectin-binding protein A N-terminus (FbpA) AUC65_01075 PF03932 CutC family AUC65_01077 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AUC65_01078 PF11700 AUC65_01078 AUC65_01079 PF02645 Uncharacterised protein, DegV family COG1307 AUC65_01080 PF02645 Uncharacterised protein, DegV family COG1307 AUC65_01081 PF13472 GDSL-like Lipase/Acylhydrolase family AUC65_01082 PF09911 AUC65_01082 AUC65_01083 PF06855 Protein of unknown function (DUF1250) AUC65_01084 PF01926 50S ribosome-binding GTPase AUC65_01085 PF01351 Ribonuclease HII AUC65_01086 PF02481 DNA recombination-mediator protein A AUC65_01087 PF01131 DNA topoisomerase AUC65_01087 PF01396 AUC65_01087 AUC65_01087 PF01751 Toprim domain AUC65_01088 PF00589 Phage integrase family AUC65_01088 PF02899 Phage integrase, N-terminal SAM-like domain AUC65_01089 PF01263 Aldose 1-epimerase AUC65_01090 PF02660 AUC65_01090 AUC65_01091 PF01368 DHH family AUC65_01091 PF02833 DHHA2 domain AUC65_01093 PF00392 Bacterial regulatory proteins, gntR family AUC65_01093 PF02080 TrkA-C domain AUC65_01094 PF00005 ABC transporter AUC65_01095 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AUC65_01097 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_01097 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01098 PF03180 NLPA lipoprotein AUC65_01099 PF01625 Peptide methionine sulfoxide reductase AUC65_01100 PF00781 Diacylglycerol kinase catalytic domain AUC65_01102 PF13419 Haloacid dehalogenase-like hydrolase AUC65_01103 PF12724 Flavodoxin domain AUC65_01104 PF01988 AUC65_01104 AUC65_01105 PF00753 Metallo-beta-lactamase superfamily AUC65_01105 PF07521 RNA-metabolising metallo-beta-lactamase AUC65_01106 PF07288 Protein of unknown function (DUF1447) AUC65_01109 PF01327 Polypeptide deformylase AUC65_01110 PF05256 Uncharacterised protein family (UPF0223) AUC65_01111 PF00459 Inositol monophosphatase family AUC65_01112 PF00009 Elongation factor Tu GTP binding domain AUC65_01112 PF00679 Elongation factor G C-terminus AUC65_01112 PF03144 Elongation factor Tu domain 2 AUC65_01112 PF14492 Elongation Factor G, domain II AUC65_01113 PF01098 AUC65_01113 AUC65_01114 PF09902 AUC65_01114 AUC65_01115 PF03602 Conserved hypothetical protein 95 AUC65_01116 PF01467 Cytidylyltransferase AUC65_01117 PF05362 Lon protease (S16) C-terminal proteolytic domain AUC65_01117 PF13180 PDZ domain AUC65_01118 PF07690 Major Facilitator Superfamily AUC65_01119 PF00582 Universal stress protein family AUC65_01120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AUC65_01121 PF01380 SIS domain AUC65_01122 PF01807 CHC2 zinc finger AUC65_01122 PF08275 DNA primase catalytic core, N-terminal domain AUC65_01122 PF10410 DnaB-helicase binding domain of primase AUC65_01122 PF13155 Toprim-like AUC65_01123 PF00140 Sigma-70 factor, region 1 AUC65_01123 PF03979 Sigma-70 factor, region 1 AUC65_01123 PF04539 Sigma-70 region 3 AUC65_01123 PF04542 Sigma-70 region 2 AUC65_01123 PF04545 Sigma-70, region 4 AUC65_01124 PF06030 AUC65_01124 AUC65_01124 PF11797 AUC65_01124 AUC65_01125 PF06030 AUC65_01125 AUC65_01125 PF11797 AUC65_01125 AUC65_01126 PF04657 AUC65_01126 AUC65_01127 PF07690 Major Facilitator Superfamily AUC65_01128 PF02324 Glycosyl hydrolase family 70 AUC65_01129 PF00072 Response regulator receiver domain AUC65_01129 PF00486 Transcriptional regulatory protein, C terminal AUC65_01130 PF00512 His Kinase A (phospho-acceptor) domain AUC65_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_01131 PF00485 Phosphoribulokinase / Uridine kinase family AUC65_01132 PF05343 M42 glutamyl aminopeptidase AUC65_01133 PF01588 Putative tRNA binding domain AUC65_01133 PF14794 Domain of unknown function (DUF4479) AUC65_01135 PF01225 Mur ligase family, catalytic domain AUC65_01135 PF02875 Mur ligase family, glutamate ligase domain AUC65_01135 PF08245 Mur ligase middle domain AUC65_01136 PF01027 Inhibitor of apoptosis-promoting Bax1 AUC65_01137 PF00476 DNA polymerase family A AUC65_01137 PF01367 5'-3' exonuclease, C-terminal SAM fold AUC65_01137 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AUC65_01138 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AUC65_01138 PF06827 Zinc finger found in FPG and IleRS AUC65_01138 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AUC65_01139 PF01121 Dephospho-CoA kinase AUC65_01140 PF07261 Replication initiation and membrane attachment AUC65_01141 PF01695 IstB-like ATP binding protein AUC65_01141 PF07319 Primosomal protein DnaI N-terminus AUC65_01142 PF07907 AUC65_01142 AUC65_01143 PF07907 AUC65_01143 AUC65_01144 PF00072 Response regulator receiver domain AUC65_01144 PF00486 Transcriptional regulatory protein, C terminal AUC65_01145 PF00512 His Kinase A (phospho-acceptor) domain AUC65_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_01146 PF04245 AUC65_01146 AUC65_01147 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AUC65_01149 PF13520 Amino acid permease AUC65_01152 PF02096 60Kd inner membrane protein AUC65_01153 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01154 PF02588 AUC65_01154 AUC65_01154 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC65_01155 PF00440 Bacterial regulatory proteins, tetR family AUC65_01156 PF01070 FMN-dependent dehydrogenase AUC65_01157 PF00288 GHMP kinases N terminal domain AUC65_01157 PF08544 GHMP kinases C terminal AUC65_01158 PF00288 GHMP kinases N terminal domain AUC65_01159 PF00288 GHMP kinases N terminal domain AUC65_01159 PF08544 GHMP kinases C terminal AUC65_01160 PF00270 DEAD/DEAH box helicase AUC65_01160 PF00929 Exonuclease AUC65_01160 PF13307 Helicase C-terminal domain AUC65_01162 PF00152 tRNA synthetases class II (D, K and N) AUC65_01162 PF01336 OB-fold nucleic acid binding domain AUC65_01163 PF07261 Replication initiation and membrane attachment AUC65_01164 PF00905 Penicillin binding protein transpeptidase domain AUC65_01164 PF00912 Transglycosylase AUC65_01165 PF03838 Recombination protein U AUC65_01166 PF06908 Protein of unknown function (DUF1273) AUC65_01167 PF05103 DivIVA protein AUC65_01169 PF01170 Putative RNA methylase family UPF0020 AUC65_01169 PF02926 THUMP domain AUC65_01170 PF00580 UvrD/REP helicase N-terminal domain AUC65_01170 PF13361 UvrD-like helicase C-terminal domain AUC65_01171 PF00533 BRCA1 C Terminus (BRCT) domain AUC65_01171 PF01653 NAD-dependent DNA ligase adenylation domain AUC65_01171 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AUC65_01171 PF03120 NAD-dependent DNA ligase OB-fold domain AUC65_01171 PF12826 Helix-hairpin-helix motif AUC65_01171 PF14520 Helix-hairpin-helix domain AUC65_01172 PF07537 CamS sex pheromone cAM373 precursor AUC65_01173 PF12917 HD containing hydrolase-like enzyme AUC65_01174 PF00188 Cysteine-rich secretory protein family AUC65_01175 PF00271 Helicase conserved C-terminal domain AUC65_01175 PF02151 UvrB/uvrC motif AUC65_01175 PF04851 Type III restriction enzyme, res subunit AUC65_01175 PF12344 Ultra-violet resistance protein B AUC65_01176 PF00364 Biotin-requiring enzyme AUC65_01177 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AUC65_01177 PF02785 Biotin carboxylase C-terminal domain AUC65_01177 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_01178 PF01039 Carboxyl transferase domain AUC65_01179 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AUC65_01180 PF00854 POT family AUC65_01181 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AUC65_01183 PF01230 HIT domain AUC65_01184 PF00005 ABC transporter AUC65_01185 PF05975 AUC65_01185 AUC65_01186 PF02390 Putative methyltransferase AUC65_01187 PF10702 Protein of unknown function (DUF2507) AUC65_01188 PF03747 ADP-ribosylglycohydrolase AUC65_01189 PF03547 AUC65_01189 AUC65_01190 PF02447 AUC65_01190 AUC65_01193 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_01193 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01194 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AUC65_01195 PF00455 AUC65_01195 AUC65_01195 PF08220 DeoR-like helix-turn-helix domain AUC65_01196 PF00294 pfkB family carbohydrate kinase AUC65_01197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AUC65_01197 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AUC65_01197 PF02378 Phosphotransferase system, EIIC AUC65_01198 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC65_01199 PF00356 Bacterial regulatory proteins, lacI family AUC65_01199 PF13407 Periplasmic binding protein domain AUC65_01200 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_01200 PF13602 Zinc-binding dehydrogenase AUC65_01201 PF01384 AUC65_01201 AUC65_01202 PF15983 AUC65_01202 AUC65_01203 PF00293 NUDIX domain AUC65_01205 PF00232 Glycosyl hydrolase family 1 AUC65_01206 PF02272 DHHA1 domain AUC65_01207 PF13302 Acetyltransferase (GNAT) domain AUC65_01208 PF03600 Citrate transporter AUC65_01209 PF13520 Amino acid permease AUC65_01211 PF00009 Elongation factor Tu GTP binding domain AUC65_01211 PF00679 Elongation factor G C-terminus AUC65_01211 PF03144 Elongation factor Tu domain 2 AUC65_01211 PF06421 GTP-binding protein LepA C-terminus AUC65_01212 PF00083 Sugar (and other) transporter AUC65_01214 PF02929 Beta galactosidase small chain AUC65_01215 PF00703 Glycosyl hydrolases family 2 AUC65_01215 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AUC65_01215 PF02837 Glycosyl hydrolases family 2, sugar binding domain AUC65_01216 PF00004 ATPase family associated with various cellular activities (AAA) AUC65_01216 PF07724 AAA domain (Cdc48 subfamily) AUC65_01216 PF10431 C-terminal, D2-small domain, of ClpB protein AUC65_01217 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01218 PF06177 AUC65_01218 AUC65_01220 PF13520 Amino acid permease AUC65_01221 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01222 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC65_01222 PF03466 LysR substrate binding domain AUC65_01223 PF00390 Malic enzyme, N-terminal domain AUC65_01223 PF03949 Malic enzyme, NAD binding domain AUC65_01224 PF03547 AUC65_01224 AUC65_01225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_01225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01226 PF00440 Bacterial regulatory proteins, tetR family AUC65_01227 PF04892 AUC65_01227 AUC65_01229 PF00005 ABC transporter AUC65_01231 PF00413 Matrixin AUC65_01232 PF02353 Mycolic acid cyclopropane synthetase AUC65_01233 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AUC65_01234 PF00253 Ribosomal protein S14p/S29e AUC65_01235 PF00471 Ribosomal protein L33 AUC65_01236 PF01521 Iron-sulphur cluster biosynthesis AUC65_01239 PF00871 Acetokinase family AUC65_01240 PF01546 Peptidase family M20/M25/M40 AUC65_01240 PF07687 Peptidase dimerisation domain AUC65_01241 PF01784 NIF3 (NGG1p interacting factor 3) AUC65_01242 PF04816 Family of unknown function (DUF633) AUC65_01243 PF00011 Hsp20/alpha crystallin family AUC65_01244 PF13432 Tetratricopeptide repeat AUC65_01249 PF00293 NUDIX domain AUC65_01253 PF13476 AAA domain AUC65_01253 PF13558 Putative exonuclease SbcCD, C subunit AUC65_01254 PF00149 Calcineurin-like phosphoesterase AUC65_01255 PF00056 lactate/malate dehydrogenase, NAD binding domain AUC65_01255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AUC65_01256 PF07690 Major Facilitator Superfamily AUC65_01257 PF07155 ECF-type riboflavin transporter, S component AUC65_01258 PF08543 Phosphomethylpyrimidine kinase AUC65_01259 PF00216 Bacterial DNA-binding protein AUC65_01260 PF01926 50S ribosome-binding GTPase AUC65_01260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AUC65_01261 PF00575 S1 RNA binding domain AUC65_01262 PF02224 Cytidylate kinase AUC65_01264 PF00270 DEAD/DEAH box helicase AUC65_01264 PF00271 Helicase conserved C-terminal domain AUC65_01266 PF12822 Protein of unknown function (DUF3816) AUC65_01268 PF06736 AUC65_01268 AUC65_01269 PF00849 RNA pseudouridylate synthase AUC65_01269 PF01479 S4 domain AUC65_01270 PF04079 Putative transcriptional regulators (Ypuh-like) AUC65_01271 PF02616 ScpA/B protein AUC65_01273 PF00589 Phage integrase family AUC65_01273 PF02899 Phage integrase, N-terminal SAM-like domain AUC65_01274 PF13509 S1 domain AUC65_01276 PF00999 Sodium/hydrogen exchanger family AUC65_01277 PF04221 RelB antitoxin AUC65_01278 PF02580 D-Tyr-tRNA(Tyr) deacylase AUC65_01279 PF02824 TGS domain AUC65_01279 PF04607 Region found in RelA / SpoT proteins AUC65_01279 PF13291 ACT domain AUC65_01279 PF13328 HD domain AUC65_01280 PF01336 OB-fold nucleic acid binding domain AUC65_01280 PF02811 PHP domain AUC65_01280 PF07733 Bacterial DNA polymerase III alpha subunit AUC65_01280 PF14579 Helix-hairpin-helix motif AUC65_01281 PF11151 AUC65_01281 AUC65_01282 PF00186 Dihydrofolate reductase AUC65_01283 PF00005 ABC transporter AUC65_01283 PF12848 ABC transporter AUC65_01283 PF16326 AUC65_01283 AUC65_01284 PF01743 Poly A polymerase head domain AUC65_01284 PF12627 Probable RNA and SrmB- binding site of polymerase A AUC65_01284 PF13735 tRNA nucleotidyltransferase domain 2 putative AUC65_01287 PF02517 CAAX protease self-immunity AUC65_01288 PF02517 CAAX protease self-immunity AUC65_01289 PF01380 SIS domain AUC65_01289 PF13522 Glutamine amidotransferase domain AUC65_01291 PF00909 Ammonium Transporter Family AUC65_01293 PF13529 Peptidase_C39 like family AUC65_01294 PF03816 Cell envelope-related transcriptional attenuator domain AUC65_01297 PF00535 Glycosyl transferase family 2 AUC65_01299 PF14897 AUC65_01299 AUC65_01300 PF00535 Glycosyl transferase family 2 AUC65_01301 PF11380 AUC65_01301 AUC65_01301 PF17101 AUC65_01301 AUC65_01302 PF00534 Glycosyl transferases group 1 AUC65_01302 PF13579 Glycosyl transferase 4-like domain AUC65_01303 PF02397 AUC65_01303 AUC65_01304 PF13614 AAA domain AUC65_01305 PF02706 Chain length determinant protein AUC65_01305 PF13807 AUC65_01305 AUC65_01307 PF01765 Ribosome recycling factor AUC65_01308 PF00696 Amino acid kinase family AUC65_01309 PF00889 Elongation factor TS AUC65_01310 PF00318 Ribosomal protein S2 AUC65_01311 PF01541 GIY-YIG catalytic domain AUC65_01312 PF05175 Methyltransferase small domain AUC65_01313 PF01553 Acyltransferase AUC65_01314 PF00877 NlpC/P60 family AUC65_01315 PF00877 NlpC/P60 family AUC65_01316 PF01757 AUC65_01316 AUC65_01317 PF03672 AUC65_01317 AUC65_01318 PF05979 Bacterial protein of unknown function (DUF896) AUC65_01319 PF00717 Peptidase S24-like AUC65_01319 PF01726 LexA DNA binding domain AUC65_01320 PF00884 Sulfatase AUC65_01322 PF00156 Phosphoribosyl transferase domain AUC65_01323 PF01368 DHH family AUC65_01323 PF02272 DHHA1 domain AUC65_01323 PF10141 AUC65_01323 AUC65_01324 PF12706 Beta-lactamase superfamily domain AUC65_01327 PF00226 DnaJ domain AUC65_01327 PF01556 DnaJ C terminal domain AUC65_01328 PF00012 Hsp70 protein AUC65_01329 PF01025 GrpE AUC65_01330 PF01628 HrcA protein C terminal domain AUC65_01330 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AUC65_01332 PF04239 Protein of unknown function (DUF421) AUC65_01333 PF11694 AUC65_01333 AUC65_01334 PF13472 GDSL-like Lipase/Acylhydrolase family AUC65_01335 PF00535 Glycosyl transferase family 2 AUC65_01336 PF00535 Glycosyl transferase family 2 AUC65_01338 PF00535 Glycosyl transferase family 2 AUC65_01339 PF01943 AUC65_01339 AUC65_01339 PF14667 Polysaccharide biosynthesis C-terminal domain AUC65_01340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AUC65_01341 PF01757 AUC65_01341 AUC65_01343 PF03275 UDP-galactopyranose mutase AUC65_01343 PF13450 NAD(P)-binding Rossmann-like domain AUC65_01344 PF14393 AUC65_01344 AUC65_01347 PF02397 AUC65_01347 AUC65_01348 PF00557 Metallopeptidase family M24 AUC65_01350 PF01183 Glycosyl hydrolases family 25 AUC65_01351 PF00877 NlpC/P60 family AUC65_01352 PF01527 Transposase AUC65_01353 PF00665 Integrase core domain AUC65_01353 PF13276 AUC65_01353 AUC65_01355 PF00563 EAL domain AUC65_01356 PF13556 PucR C-terminal helix-turn-helix domain AUC65_01357 PF01609 Transposase DDE domain AUC65_01360 PF05043 Mga helix-turn-helix domain AUC65_01363 PF02073 Thermophilic metalloprotease (M29) AUC65_01364 PF00188 Cysteine-rich secretory protein family AUC65_01365 PF08861 AUC65_01365 AUC65_01366 PF00849 RNA pseudouridylate synthase AUC65_01367 PF00313 'Cold-shock' DNA-binding domain AUC65_01368 PF16069 AUC65_01368 AUC65_01369 PF07690 Major Facilitator Superfamily AUC65_01370 PF01476 LysM domain AUC65_01371 PF00485 Phosphoribulokinase / Uridine kinase family AUC65_01372 PF13245 Part of AAA domain AUC65_01372 PF13538 UvrD-like helicase C-terminal domain AUC65_01374 PF00154 recA bacterial DNA recombination protein AUC65_01375 PF02464 Competence-damaged protein AUC65_01376 PF01066 CDP-alcohol phosphatidyltransferase AUC65_01377 PF13413 Helix-turn-helix domain AUC65_01377 PF13464 AUC65_01377 AUC65_01378 PF00675 Insulinase (Peptidase family M16) AUC65_01378 PF05193 Peptidase M16 inactive domain AUC65_01379 PF05193 Peptidase M16 inactive domain AUC65_01381 PF02447 AUC65_01381 AUC65_01382 PF00205 Thiamine pyrophosphate enzyme, central domain AUC65_01382 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AUC65_01382 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AUC65_01383 PF02447 AUC65_01383 AUC65_01384 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_01384 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC65_01385 PF01966 HD domain AUC65_01386 PF13514 AAA domain AUC65_01387 PF00149 Calcineurin-like phosphoesterase AUC65_01388 PF04221 RelB antitoxin AUC65_01389 PF06133 Protein of unknown function (DUF964) AUC65_01390 PF00905 Penicillin binding protein transpeptidase domain AUC65_01390 PF00912 Transglycosylase AUC65_01391 PF01316 Arginine repressor, DNA binding domain AUC65_01391 PF02863 Arginine repressor, C-terminal domain AUC65_01392 PF01370 NAD dependent epimerase/dehydratase family AUC65_01396 PF02082 Transcriptional regulator AUC65_01397 PF12698 ABC-2 family transporter protein AUC65_01398 PF00005 ABC transporter AUC65_01398 PF00664 ABC transporter transmembrane region AUC65_01399 PF00005 ABC transporter AUC65_01399 PF00664 ABC transporter transmembrane region AUC65_01400 PF00750 tRNA synthetases class I (R) AUC65_01400 PF03485 Arginyl tRNA synthetase N terminal domain AUC65_01400 PF05746 DALR anticodon binding domain AUC65_01402 PF02875 Mur ligase family, glutamate ligase domain AUC65_01402 PF08245 Mur ligase middle domain AUC65_01403 PF01725 Ham1 family AUC65_01404 PF02875 Mur ligase family, glutamate ligase domain AUC65_01404 PF08245 Mur ligase middle domain AUC65_01405 PF00005 ABC transporter AUC65_01406 PF00950 AUC65_01406 AUC65_01407 PF01297 Periplasmic solute binding protein family AUC65_01409 PF00781 Diacylglycerol kinase catalytic domain AUC65_01410 PF02637 GatB domain AUC65_01410 PF02934 GatB/GatE catalytic domain AUC65_01411 PF01425 Amidase AUC65_01412 PF02686 Glu-tRNAGln amidotransferase C subunit AUC65_01413 PF01189 NOL1/NOP2/sun family AUC65_01413 PF13636 pre-rRNA processing and ribosome biogenesis AUC65_01413 PF17125 AUC65_01413 AUC65_01413 PF17126 AUC65_01413 AUC65_01414 PF08282 haloacid dehalogenase-like hydrolase AUC65_01415 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AUC65_01415 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AUC65_01415 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AUC65_01416 PF13349 AUC65_01416 AUC65_01417 PF08006 AUC65_01417 AUC65_01418 PF03551 Transcriptional regulator PadR-like family AUC65_01420 PF01566 AUC65_01420 AUC65_01421 PF00582 Universal stress protein family AUC65_01422 PF07308 AUC65_01422 AUC65_01423 PF00294 pfkB family carbohydrate kinase AUC65_01424 PF00248 Aldo/keto reductase family AUC65_01425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AUC65_01425 PF14572 Phosphoribosyl synthetase-associated domain AUC65_01426 PF09819 AUC65_01426 AUC65_01427 PF00005 ABC transporter AUC65_01428 PF02361 Cobalt transport protein AUC65_01430 PF02481 DNA recombination-mediator protein A AUC65_01434 PF01487 Type I 3-dehydroquinase AUC65_01435 PF01202 Shikimate kinase AUC65_01436 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUC65_01437 PF01264 Chorismate synthase AUC65_01438 PF01761 3-dehydroquinate synthase AUC65_01439 PF00793 DAHP synthetase I family AUC65_01440 PF08501 Shikimate dehydrogenase substrate binding domain AUC65_01441 PF01988 AUC65_01441 AUC65_01442 PF01988 AUC65_01442 AUC65_01443 PF12822 Protein of unknown function (DUF3816) AUC65_01444 PF00155 Aminotransferase class I and II AUC65_01445 PF01427 D-ala-D-ala dipeptidase AUC65_01449 PF00665 Integrase core domain AUC65_01449 PF13276 AUC65_01449 AUC65_01450 PF01527 Transposase AUC65_01451 PF05133 Phage portal protein, SPP1 Gp6-like AUC65_01452 PF04466 Phage terminase large subunit AUC65_01452 PF17288 AUC65_01452 AUC65_01453 PF03592 Terminase small subunit AUC65_01465 PF01695 IstB-like ATP binding protein AUC65_01466 PF07261 Replication initiation and membrane attachment AUC65_01467 PF16784 AUC65_01467 AUC65_01469 PF07083 AUC65_01469 AUC65_01476 PF13443 Cro/C1-type HTH DNA-binding domain AUC65_01479 PF02498 AUC65_01479 AUC65_01479 PF10552 AUC65_01479 AUC65_01483 PF12844 Helix-turn-helix domain AUC65_01484 PF06114 Domain of unknown function (DUF955) AUC65_01485 PF04355 SmpA / OmlA family AUC65_01487 PF03013 Pyrimidine dimer DNA glycosylase AUC65_01489 PF00589 Phage integrase family AUC65_01489 PF13102 Phage integrase SAM-like domain AUC65_01489 PF14657 AUC65_01489 AUC65_01490 PF07722 Peptidase C26 AUC65_01491 PF01118 Semialdehyde dehydrogenase, NAD binding domain AUC65_01491 PF02774 Semialdehyde dehydrogenase, dimerisation domain AUC65_01492 PF00155 Aminotransferase class I and II AUC65_01493 PF01113 Dihydrodipicolinate reductase, N-terminus AUC65_01493 PF05173 Dihydrodipicolinate reductase, C-terminus AUC65_01494 PF00701 Dihydrodipicolinate synthetase family AUC65_01495 PF01546 Peptidase family M20/M25/M40 AUC65_01495 PF07687 Peptidase dimerisation domain AUC65_01496 PF00132 Bacterial transferase hexapeptide (six repeats) AUC65_01496 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AUC65_01496 PF14602 Hexapeptide repeat of succinyl-transferase AUC65_01497 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AUC65_01497 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AUC65_01498 PF00842 Alanine racemase, C-terminal domain AUC65_01498 PF01168 Alanine racemase, N-terminal domain AUC65_01499 PF00696 Amino acid kinase family AUC65_01500 PF11311 AUC65_01500 AUC65_01501 PF00356 Bacterial regulatory proteins, lacI family AUC65_01501 PF13377 Periplasmic binding protein-like domain AUC65_01502 PF00288 GHMP kinases N terminal domain AUC65_01502 PF08544 GHMP kinases C terminal AUC65_01503 PF12822 Protein of unknown function (DUF3816) AUC65_01505 PF01325 Iron dependent repressor, N-terminal DNA binding domain AUC65_01505 PF02742 Iron dependent repressor, metal binding and dimerisation domain AUC65_01505 PF04023 FeoA domain AUC65_01506 PF04203 Sortase family AUC65_01509 PF02629 CoA binding domain AUC65_01509 PF06971 Putative DNA-binding protein N-terminus AUC65_01510 PF00270 DEAD/DEAH box helicase AUC65_01510 PF00271 Helicase conserved C-terminal domain AUC65_01511 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC65_01512 PF01938 TRAM domain AUC65_01512 PF05958 tRNA (Uracil-5-)-methyltransferase AUC65_01513 PF05043 Mga helix-turn-helix domain AUC65_01514 PF01435 Peptidase family M48 AUC65_01515 PF04011 LemA family AUC65_01516 PF00144 Beta-lactamase AUC65_01517 PF06769 Plasmid encoded toxin Txe AUC65_01518 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUC65_01518 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUC65_01518 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUC65_01518 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUC65_01519 PF02388 FemAB family AUC65_01521 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AUC65_01522 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AUC65_01523 PF01039 Carboxyl transferase domain AUC65_01524 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AUC65_01524 PF02785 Biotin carboxylase C-terminal domain AUC65_01524 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_01525 PF07977 FabA-like domain AUC65_01526 PF00364 Biotin-requiring enzyme AUC65_01527 PF00109 Beta-ketoacyl synthase, N-terminal domain AUC65_01527 PF02801 Beta-ketoacyl synthase, C-terminal domain AUC65_01528 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01529 PF00698 Acyl transferase domain AUC65_01530 PF03060 Nitronate monooxygenase AUC65_01531 PF00550 Phosphopantetheine attachment site AUC65_01532 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUC65_01532 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUC65_01533 PF01047 MarR family AUC65_01534 PF07977 FabA-like domain AUC65_01535 PF05532 CsbD-like AUC65_01536 PF00206 Lyase AUC65_01536 PF10397 Adenylosuccinate lyase C-terminus AUC65_01537 PF13616 PPIC-type PPIASE domain AUC65_01538 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_01538 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUC65_01539 PF00117 Glutamine amidotransferase class-I AUC65_01539 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AUC65_01540 PF00156 Phosphoribosyl transferase domain AUC65_01541 PF00849 RNA pseudouridylate synthase AUC65_01541 PF01479 S4 domain AUC65_01542 PF17255 AUC65_01542 AUC65_01543 PF00075 RNase H AUC65_01544 PF03553 AUC65_01544 AUC65_01545 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AUC65_01546 PF00324 Amino acid permease AUC65_01547 PF01381 Helix-turn-helix AUC65_01547 PF13443 Cro/C1-type HTH DNA-binding domain AUC65_01548 PF00106 short chain dehydrogenase AUC65_01549 PF01197 Ribosomal protein L31 AUC65_01550 PF00009 Elongation factor Tu GTP binding domain AUC65_01550 PF00679 Elongation factor G C-terminus AUC65_01550 PF03144 Elongation factor Tu domain 2 AUC65_01550 PF06421 GTP-binding protein LepA C-terminus AUC65_01552 PF00248 Aldo/keto reductase family AUC65_01553 PF00582 Universal stress protein family AUC65_01554 PF00171 Aldehyde dehydrogenase family AUC65_01554 PF00465 Iron-containing alcohol dehydrogenase AUC65_01555 PF00334 Nucleoside diphosphate kinase AUC65_01556 PF13091 PLD-like domain AUC65_01556 PF13396 AUC65_01556 AUC65_01557 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AUC65_01557 PF03466 LysR substrate binding domain AUC65_01558 PF00162 Phosphoglycerate kinase AUC65_01559 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AUC65_01559 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AUC65_01564 PF01381 Helix-turn-helix AUC65_01566 PF13930 DNA/RNA non-specific endonuclease AUC65_01568 PF00300 Histidine phosphatase superfamily (branch 1) AUC65_01569 PF06115 AUC65_01569 AUC65_01570 PF03613 AUC65_01570 AUC65_01571 PF03609 AUC65_01571 AUC65_01572 PF03610 PTS system fructose IIA component AUC65_01572 PF03830 PTS system sorbose subfamily IIB component AUC65_01573 PF09586 AUC65_01573 AUC65_01574 PF03747 ADP-ribosylglycohydrolase AUC65_01586 PF00884 Sulfatase AUC65_01587 PF08796 Protein of unknown function (DUF1797) AUC65_01588 PF03706 AUC65_01588 AUC65_01589 PF00534 Glycosyl transferases group 1 AUC65_01589 PF13439 Glycosyltransferase Family 4 AUC65_01590 PF00534 Glycosyl transferases group 1 AUC65_01590 PF13439 Glycosyltransferase Family 4 AUC65_01591 PF00156 Phosphoribosyl transferase domain AUC65_01592 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AUC65_01593 PF01180 Dihydroorotate dehydrogenase AUC65_01594 PF02142 MGS-like domain AUC65_01594 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AUC65_01594 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AUC65_01595 PF00117 Glutamine amidotransferase class-I AUC65_01595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AUC65_01596 PF01979 Amidohydrolase family AUC65_01597 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUC65_01597 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUC65_01602 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AUC65_01602 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AUC65_01602 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AUC65_01602 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AUC65_01603 PF07949 YbbR-like protein AUC65_01604 PF02457 DisA bacterial checkpoint controller nucleotide-binding AUC65_01605 PF00999 Sodium/hydrogen exchanger family AUC65_01606 PF01565 FAD binding domain AUC65_01606 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AUC65_01607 PF00929 Exonuclease AUC65_01608 PF00583 Acetyltransferase (GNAT) family AUC65_01609 PF02367 Uncharacterised P-loop hydrolase UPF0079 AUC65_01610 PF01515 Phosphate acetyl/butaryl transferase AUC65_01611 PF03167 Uracil DNA glycosylase superfamily AUC65_01613 PF00893 Small Multidrug Resistance protein AUC65_01614 PF00893 Small Multidrug Resistance protein AUC65_01615 PF00005 ABC transporter AUC65_01616 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_01616 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01617 PF07690 Major Facilitator Superfamily AUC65_01618 PF07859 alpha/beta hydrolase fold AUC65_01619 PF01668 SmpB protein AUC65_01620 PF00575 S1 RNA binding domain AUC65_01620 PF00773 RNB domain AUC65_01620 PF08206 Ribonuclease B OB domain AUC65_01621 PF03840 Preprotein translocase SecG subunit AUC65_01622 PF07690 Major Facilitator Superfamily AUC65_01623 PF01425 Amidase AUC65_01624 PF00113 Enolase, C-terminal TIM barrel domain AUC65_01624 PF03952 Enolase, N-terminal domain AUC65_01627 PF00121 Triosephosphate isomerase AUC65_01628 PF00391 PEP-utilising enzyme, mobile domain AUC65_01628 PF02896 PEP-utilising enzyme, TIM barrel domain AUC65_01628 PF05524 PEP-utilising enzyme, N-terminal AUC65_01629 PF00381 PTS HPr component phosphorylation site AUC65_01631 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AUC65_01631 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AUC65_01632 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01636 PF00483 Nucleotidyl transferase AUC65_01637 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AUC65_01637 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AUC65_01638 PF02603 HPr Serine kinase N terminus AUC65_01638 PF07475 HPr Serine kinase C-terminal domain AUC65_01639 PF04020 AUC65_01639 AUC65_01640 PF04221 RelB antitoxin AUC65_01641 PF00582 Universal stress protein family AUC65_01643 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AUC65_01644 PF13416 Bacterial extracellular solute-binding protein AUC65_01645 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01646 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01647 PF00005 ABC transporter AUC65_01647 PF08402 TOBE domain AUC65_01649 PF00009 Elongation factor Tu GTP binding domain AUC65_01649 PF00679 Elongation factor G C-terminus AUC65_01649 PF03144 Elongation factor Tu domain 2 AUC65_01649 PF03764 Elongation factor G, domain IV AUC65_01649 PF14492 Elongation Factor G, domain II AUC65_01650 PF00177 Ribosomal protein S7p/S5e AUC65_01651 PF00164 Ribosomal protein S12/S23 AUC65_01653 PF00005 ABC transporter AUC65_01653 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_01654 PF00005 ABC transporter AUC65_01654 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_01655 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01656 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01657 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_01658 PF00742 Homoserine dehydrogenase AUC65_01658 PF03447 Homoserine dehydrogenase, NAD binding domain AUC65_01659 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC65_01660 PF04204 Homoserine O-succinyltransferase AUC65_01661 PF13527 Acetyltransferase (GNAT) domain AUC65_01661 PF13530 Sterol carrier protein domain AUC65_01662 PF02608 Basic membrane protein AUC65_01663 PF00453 Ribosomal protein L20 AUC65_01663 PF12949 HeH/LEM domain AUC65_01664 PF01632 Ribosomal protein L35 AUC65_01665 PF00707 Translation initiation factor IF-3, C-terminal domain AUC65_01665 PF05198 Translation initiation factor IF-3, N-terminal domain AUC65_01666 PF01029 NusB family AUC65_01667 PF03780 AUC65_01667 AUC65_01668 PF01132 Elongation factor P (EF-P) OB domain AUC65_01668 PF08207 Elongation factor P (EF-P) KOW-like domain AUC65_01668 PF09285 Elongation factor P, C-terminal AUC65_01669 PF00342 Phosphoglucose isomerase AUC65_01670 PF01263 Aldose 1-epimerase AUC65_01671 PF00480 ROK family AUC65_01672 PF06800 AUC65_01672 AUC65_01673 PF00512 His Kinase A (phospho-acceptor) domain AUC65_01673 PF00672 HAMP domain AUC65_01673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_01674 PF00072 Response regulator receiver domain AUC65_01674 PF00486 Transcriptional regulatory protein, C terminal AUC65_01675 PF13538 UvrD-like helicase C-terminal domain AUC65_01675 PF13604 AAA domain AUC65_01676 PF07969 Amidohydrolase family AUC65_01677 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AUC65_01677 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AUC65_01678 PF01476 LysM domain AUC65_01679 PF01131 DNA topoisomerase AUC65_01679 PF01751 Toprim domain AUC65_01680 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AUC65_01682 PF00924 Mechanosensitive ion channel AUC65_01684 PF00005 ABC transporter AUC65_01685 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01687 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_01688 PF00206 Lyase AUC65_01688 PF10397 Adenylosuccinate lyase C-terminus AUC65_01693 PF00478 IMP dehydrogenase / GMP reductase domain AUC65_01695 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01696 PF13561 Enoyl-(Acyl carrier protein) reductase AUC65_01699 PF07179 AUC65_01699 AUC65_01701 PF03051 Peptidase C1-like family AUC65_01705 PF01156 Inosine-uridine preferring nucleoside hydrolase AUC65_01706 PF00271 Helicase conserved C-terminal domain AUC65_01706 PF11907 AUC65_01706 AUC65_01707 PF00665 Integrase core domain AUC65_01707 PF13276 AUC65_01707 AUC65_01708 PF01527 Transposase AUC65_01709 PF04851 Type III restriction enzyme, res subunit AUC65_01709 PF13091 PLD-like domain AUC65_01710 PF00293 NUDIX domain AUC65_01711 PF03235 AUC65_01711 AUC65_01711 PF07510 AUC65_01711 AUC65_01712 PF03235 AUC65_01712 AUC65_01714 PF02086 D12 class N6 adenine-specific DNA methyltransferase AUC65_01714 PF04886 AUC65_01714 AUC65_01715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AUC65_01716 PF00294 pfkB family carbohydrate kinase AUC65_01717 PF07690 Major Facilitator Superfamily AUC65_01718 PF05025 RbsD / FucU transport protein family AUC65_01719 PF00356 Bacterial regulatory proteins, lacI family AUC65_01719 PF13377 Periplasmic binding protein-like domain AUC65_01721 PF01380 SIS domain AUC65_01722 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AUC65_01723 PF00294 pfkB family carbohydrate kinase AUC65_01725 PF01261 Xylose isomerase-like TIM barrel AUC65_01726 PF00356 Bacterial regulatory proteins, lacI family AUC65_01726 PF13407 Periplasmic binding protein domain AUC65_01729 PF13349 AUC65_01729 AUC65_01730 PF03551 Transcriptional regulator PadR-like family AUC65_01731 PF07690 Major Facilitator Superfamily AUC65_01732 PF01757 AUC65_01732 AUC65_01733 PF00501 AMP-binding enzyme AUC65_01733 PF13193 AMP-binding enzyme C-terminal domain AUC65_01734 PF09084 NMT1/THI5 like AUC65_01735 PF00005 ABC transporter AUC65_01736 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01737 PF00809 Pterin binding enzyme AUC65_01738 PF08245 Mur ligase middle domain AUC65_01739 PF01227 GTP cyclohydrolase I AUC65_01740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AUC65_01741 PF02152 Dihydroneopterin aldolase AUC65_01750 PF08282 haloacid dehalogenase-like hydrolase AUC65_01753 PF00326 Prolyl oligopeptidase family AUC65_01754 PF03180 NLPA lipoprotein AUC65_01756 PF00294 pfkB family carbohydrate kinase AUC65_01757 PF01081 KDPG and KHG aldolase AUC65_01758 PF02614 Glucuronate isomerase AUC65_01759 PF03786 D-mannonate dehydratase (UxuA) AUC65_01760 PF01232 Mannitol dehydrogenase Rossmann domain AUC65_01760 PF08125 Mannitol dehydrogenase C-terminal domain AUC65_01761 PF13347 MFS/sugar transport protein AUC65_01762 PF00392 Bacterial regulatory proteins, gntR family AUC65_01762 PF07729 FCD domain AUC65_01763 PF13419 Haloacid dehalogenase-like hydrolase AUC65_01764 PF03632 Glycosyl hydrolase family 65 central catalytic domain AUC65_01764 PF03633 Glycosyl hydrolase family 65, C-terminal domain AUC65_01764 PF03636 Glycosyl hydrolase family 65, N-terminal domain AUC65_01765 PF07690 Major Facilitator Superfamily AUC65_01766 PF00356 Bacterial regulatory proteins, lacI family AUC65_01766 PF13377 Periplasmic binding protein-like domain AUC65_01770 PF05014 Nucleoside 2-deoxyribosyltransferase AUC65_01771 PF07690 Major Facilitator Superfamily AUC65_01772 PF02687 AUC65_01772 AUC65_01773 PF00005 ABC transporter AUC65_01774 PF06993 AUC65_01774 AUC65_01776 PF13556 PucR C-terminal helix-turn-helix domain AUC65_01777 PF00696 Amino acid kinase family AUC65_01778 PF13520 Amino acid permease AUC65_01779 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AUC65_01779 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AUC65_01780 PF02274 Amidinotransferase AUC65_01781 PF00013 KH domain AUC65_01781 PF01966 HD domain AUC65_01781 PF12072 AUC65_01781 AUC65_01786 PF15432 AUC65_01786 AUC65_01787 PF16929 AUC65_01787 AUC65_01788 PF16993 AUC65_01788 AUC65_01792 PF00534 Glycosyl transferases group 1 AUC65_01794 PF00534 Glycosyl transferases group 1 AUC65_01800 PF05043 Mga helix-turn-helix domain AUC65_01801 PF07690 Major Facilitator Superfamily AUC65_01802 PF00122 E1-E2 ATPase AUC65_01802 PF00702 haloacid dehalogenase-like hydrolase AUC65_01803 PF00440 Bacterial regulatory proteins, tetR family AUC65_01806 PF00440 Bacterial regulatory proteins, tetR family AUC65_01808 PF01468 GA module AUC65_01809 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AUC65_01809 PF00367 phosphotransferase system, EIIB AUC65_01809 PF02378 Phosphotransferase system, EIIC AUC65_01810 PF00874 PRD domain AUC65_01810 PF03123 CAT RNA binding domain AUC65_01811 PF00232 Glycosyl hydrolase family 1 AUC65_01812 PF00480 ROK family AUC65_01813 PF07690 Major Facilitator Superfamily AUC65_01817 PF00575 S1 RNA binding domain AUC65_01817 PF09371 Tex-like protein N-terminal domain AUC65_01817 PF12836 Helix-hairpin-helix motif AUC65_01817 PF16921 AUC65_01817 AUC65_01819 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC65_01820 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AUC65_01820 PF16321 AUC65_01820 AUC65_01822 PF00271 Helicase conserved C-terminal domain AUC65_01823 PF12849 PBP superfamily domain AUC65_01829 PF07859 alpha/beta hydrolase fold AUC65_01830 PF06445 GyrI-like small molecule binding domain AUC65_01831 PF04266 ASCH domain AUC65_01832 PF00588 SpoU rRNA Methylase family AUC65_01838 PF00929 Exonuclease AUC65_01838 PF02811 PHP domain AUC65_01838 PF07733 Bacterial DNA polymerase III alpha subunit AUC65_01838 PF11490 AUC65_01838 AUC65_01838 PF14480 AUC65_01838 AUC65_01838 PF14579 Helix-hairpin-helix motif AUC65_01839 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AUC65_01839 PF03129 Anticodon binding domain AUC65_01839 PF04073 Aminoacyl-tRNA editing domain AUC65_01840 PF02163 Peptidase family M50 AUC65_01840 PF13180 PDZ domain AUC65_01841 PF01148 Cytidylyltransferase family AUC65_01842 PF01255 Putative undecaprenyl diphosphate synthase AUC65_01843 PF08282 haloacid dehalogenase-like hydrolase AUC65_01844 PF04138 AUC65_01844 AUC65_01849 PF04474 AUC65_01849 AUC65_01850 PF00465 Iron-containing alcohol dehydrogenase AUC65_01851 PF07690 Major Facilitator Superfamily AUC65_01852 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01852 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AUC65_01853 PF00005 ABC transporter AUC65_01854 PF01641 SelR domain AUC65_01855 PF05857 AUC65_01855 AUC65_01856 PF00885 6,7-dimethyl-8-ribityllumazine synthase AUC65_01857 PF00925 GTP cyclohydrolase II AUC65_01857 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AUC65_01858 PF00677 Lumazine binding domain AUC65_01859 PF01872 RibD C-terminal domain AUC65_01860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUC65_01861 PF00893 Small Multidrug Resistance protein AUC65_01862 PF00893 Small Multidrug Resistance protein AUC65_01864 PF00265 Thymidine kinase AUC65_01865 PF08837 Protein of unknown function (DUF1810) AUC65_01866 PF00413 Matrixin AUC65_01867 PF02645 Uncharacterised protein, DegV family COG1307 AUC65_01868 PF00248 Aldo/keto reductase family AUC65_01869 PF00005 ABC transporter AUC65_01870 PF07690 Major Facilitator Superfamily AUC65_01871 PF00440 Bacterial regulatory proteins, tetR family AUC65_01871 PF16859 AUC65_01871 AUC65_01873 PF01979 Amidohydrolase family AUC65_01874 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_01875 PF00107 Zinc-binding dehydrogenase AUC65_01875 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_01878 PF00730 HhH-GPD superfamily base excision DNA repair protein AUC65_01880 PF08797 HIRAN domain AUC65_01881 PF07299 Fibronectin-binding protein (FBP) AUC65_01881 PF16571 AUC65_01881 AUC65_01882 PF00746 AUC65_01882 AUC65_01883 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AUC65_01884 PF00156 Phosphoribosyl transferase domain AUC65_01885 PF00709 Adenylosuccinate synthetase AUC65_01886 PF00122 E1-E2 ATPase AUC65_01886 PF00689 Cation transporting ATPase, C-terminus AUC65_01886 PF00690 Cation transporter/ATPase, N-terminus AUC65_01886 PF00702 haloacid dehalogenase-like hydrolase AUC65_01887 PF00860 Permease family AUC65_01889 PF02581 Thiamine monophosphate synthase/TENI AUC65_01890 PF06160 AUC65_01890 AUC65_01891 PF04261 Dyp-type peroxidase family AUC65_01892 PF07690 Major Facilitator Superfamily AUC65_01893 PF00163 Ribosomal protein S4/S9 N-terminal domain AUC65_01893 PF01479 S4 domain AUC65_01894 PF06496 AUC65_01894 AUC65_01895 PF00392 Bacterial regulatory proteins, gntR family AUC65_01895 PF07702 UTRA domain AUC65_01896 PF01979 Amidohydrolase family AUC65_01897 PF00005 ABC transporter AUC65_01897 PF02687 AUC65_01897 AUC65_01897 PF12704 MacB-like periplasmic core domain AUC65_01898 PF00440 Bacterial regulatory proteins, tetR family AUC65_01899 PF08282 haloacid dehalogenase-like hydrolase AUC65_01900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AUC65_01901 PF08282 haloacid dehalogenase-like hydrolase AUC65_01905 PF03807 NADP oxidoreductase coenzyme F420-dependent AUC65_01905 PF14748 Pyrroline-5-carboxylate reductase dimerisation AUC65_01906 PF01098 AUC65_01906 AUC65_01907 PF11184 AUC65_01907 AUC65_01908 PF06723 MreB/Mbl protein AUC65_01909 PF01225 Mur ligase family, catalytic domain AUC65_01909 PF02875 Mur ligase family, glutamate ligase domain AUC65_01909 PF08245 Mur ligase middle domain AUC65_01910 PF02653 AUC65_01910 AUC65_01911 PF02653 AUC65_01911 AUC65_01912 PF00005 ABC transporter AUC65_01913 PF02608 Basic membrane protein AUC65_01914 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01916 PF01022 Bacterial regulatory protein, arsR family AUC65_01917 PF01594 AUC65_01917 AUC65_01918 PF02588 AUC65_01918 AUC65_01918 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AUC65_01919 PF01063 Aminotransferase class IV AUC65_01920 PF01906 Putative heavy-metal-binding AUC65_01922 PF00255 Glutathione peroxidase AUC65_01923 PF00300 Histidine phosphatase superfamily (branch 1) AUC65_01926 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01927 PF07179 AUC65_01927 AUC65_01928 PF07179 AUC65_01928 AUC65_01929 PF02608 Basic membrane protein AUC65_01930 PF02608 Basic membrane protein AUC65_01931 PF00288 GHMP kinases N terminal domain AUC65_01931 PF08544 GHMP kinases C terminal AUC65_01932 PF04304 AUC65_01932 AUC65_01935 PF09967 AUC65_01935 AUC65_01935 PF13203 AUC65_01935 AUC65_01937 PF01546 Peptidase family M20/M25/M40 AUC65_01937 PF07687 Peptidase dimerisation domain AUC65_01938 PF06081 AUC65_01938 AUC65_01939 PF07690 Major Facilitator Superfamily AUC65_01940 PF00772 DnaB-like helicase N terminal domain AUC65_01940 PF03796 DnaB-like helicase C terminal domain AUC65_01941 PF01281 Ribosomal protein L9, N-terminal domain AUC65_01941 PF03948 Ribosomal protein L9, C-terminal domain AUC65_01942 PF01368 DHH family AUC65_01942 PF02272 DHHA1 domain AUC65_01943 PF00005 ABC transporter AUC65_01943 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_01944 PF00005 ABC transporter AUC65_01944 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_01945 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01945 PF12911 AUC65_01945 AUC65_01946 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01947 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_01948 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01949 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_01950 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_01951 PF00005 ABC transporter AUC65_01954 PF00625 Guanylate kinase AUC65_01955 PF02632 BioY family AUC65_01956 PF02237 Biotin protein ligase C terminal domain AUC65_01956 PF03099 Biotin/lipoate A/B protein ligase family AUC65_01957 PF12724 Flavodoxin domain AUC65_01958 PF06207 AUC65_01958 AUC65_01960 PF01546 Peptidase family M20/M25/M40 AUC65_01961 PF13347 MFS/sugar transport protein AUC65_01962 PF01256 Carbohydrate kinase AUC65_01963 PF02541 Ppx/GppA phosphatase family AUC65_01964 PF00579 tRNA synthetases class I (W and Y) AUC65_01965 PF13245 Part of AAA domain AUC65_01965 PF13538 UvrD-like helicase C-terminal domain AUC65_01966 PF06028 Alpha/beta hydrolase of unknown function (DUF915) AUC65_01968 PF00144 Beta-lactamase AUC65_01969 PF04914 DltD C-terminal region AUC65_01970 PF00550 Phosphopantetheine attachment site AUC65_01971 PF03062 AUC65_01971 AUC65_01972 PF00501 AMP-binding enzyme AUC65_01972 PF13193 AMP-binding enzyme C-terminal domain AUC65_01973 PF12459 AUC65_01973 AUC65_01974 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_01974 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_01975 PF02452 PemK-like protein AUC65_01976 PF00842 Alanine racemase, C-terminal domain AUC65_01976 PF01168 Alanine racemase, N-terminal domain AUC65_01976 PF01648 4'-phosphopantetheinyl transferase superfamily AUC65_01977 PF00270 DEAD/DEAH box helicase AUC65_01977 PF00271 Helicase conserved C-terminal domain AUC65_01978 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AUC65_01979 PF00117 Glutamine amidotransferase class-I AUC65_01979 PF06418 CTP synthase N-terminus AUC65_01980 PF04973 AUC65_01980 AUC65_01981 PF05066 HB1, ASXL, restriction endonuclease HTH domain AUC65_01982 PF08282 haloacid dehalogenase-like hydrolase AUC65_01983 PF01966 HD domain AUC65_01984 PF09148 Domain of unknown function (DUF1934) AUC65_01985 PF13180 PDZ domain AUC65_01985 PF13365 Trypsin-like peptidase domain AUC65_01986 PF00753 Metallo-beta-lactamase superfamily AUC65_01987 PF09648 YycH protein AUC65_01988 PF07435 YycH protein AUC65_01989 PF00512 His Kinase A (phospho-acceptor) domain AUC65_01989 PF00672 HAMP domain AUC65_01989 PF00989 PAS fold AUC65_01989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_01990 PF00072 Response regulator receiver domain AUC65_01990 PF00486 Transcriptional regulatory protein, C terminal AUC65_01996 PF01084 Ribosomal protein S18 AUC65_01997 PF00436 Single-strand binding protein family AUC65_01998 PF01250 Ribosomal protein S6 AUC65_01999 PF06458 MucBP domain AUC65_02000 PF01156 Inosine-uridine preferring nucleoside hydrolase AUC65_02001 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AUC65_02001 PF14572 Phosphoribosyl synthetase-associated domain AUC65_02002 PF00132 Bacterial transferase hexapeptide (six repeats) AUC65_02002 PF00483 Nucleotidyl transferase AUC65_02003 PF00156 Phosphoribosyl transferase domain AUC65_02003 PF09182 Bacterial purine repressor, N-terminal AUC65_02004 PF00293 NUDIX domain AUC65_02005 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AUC65_02005 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AUC65_02006 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_02006 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC65_02007 PF07690 Major Facilitator Superfamily AUC65_02008 PF00107 Zinc-binding dehydrogenase AUC65_02008 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_02009 PF00580 UvrD/REP helicase N-terminal domain AUC65_02009 PF12705 PD-(D/E)XK nuclease superfamily AUC65_02009 PF13361 UvrD-like helicase C-terminal domain AUC65_02010 PF12705 PD-(D/E)XK nuclease superfamily AUC65_02013 PF01546 Peptidase family M20/M25/M40 AUC65_02013 PF07687 Peptidase dimerisation domain AUC65_02014 PF13520 Amino acid permease AUC65_02016 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AUC65_02016 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUC65_02018 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AUC65_02019 PF01053 Cys/Met metabolism PLP-dependent enzyme AUC65_02021 PF01544 CorA-like Mg2+ transporter protein AUC65_02022 PF02388 FemAB family AUC65_02023 PF01943 AUC65_02023 AUC65_02023 PF14667 Polysaccharide biosynthesis C-terminal domain AUC65_02025 PF00534 Glycosyl transferases group 1 AUC65_02026 PF00133 tRNA synthetases class I (I, L, M and V) AUC65_02026 PF08264 Anticodon-binding domain of tRNA AUC65_02026 PF09334 tRNA synthetases class I (M) AUC65_02026 PF13603 Leucyl-tRNA synthetase, Domain 2 AUC65_02027 PF01569 PAP2 superfamily AUC65_02029 PF05958 tRNA (Uracil-5-)-methyltransferase AUC65_02032 PF03358 NADPH-dependent FMN reductase AUC65_02033 PF07690 Major Facilitator Superfamily AUC65_02034 PF00232 Glycosyl hydrolase family 1 AUC65_02036 PF03009 Glycerophosphoryl diester phosphodiesterase family AUC65_02036 PF10110 AUC65_02036 AUC65_02037 PF08002 Protein of unknown function (DUF1697) AUC65_02038 PF02773 S-adenosylmethionine synthetase, C-terminal domain AUC65_02039 PF01527 Transposase AUC65_02040 PF00665 Integrase core domain AUC65_02040 PF13276 AUC65_02040 AUC65_02041 PF12161 HsdM N-terminal domain AUC65_02042 PF00438 S-adenosylmethionine synthetase, N-terminal domain AUC65_02042 PF02772 S-adenosylmethionine synthetase, central domain AUC65_02042 PF02773 S-adenosylmethionine synthetase, C-terminal domain AUC65_02044 PF00557 Metallopeptidase family M24 AUC65_02046 PF03816 Cell envelope-related transcriptional attenuator domain AUC65_02048 PF00512 His Kinase A (phospho-acceptor) domain AUC65_02048 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AUC65_02049 PF00072 Response regulator receiver domain AUC65_02049 PF00486 Transcriptional regulatory protein, C terminal AUC65_02050 PF01625 Peptide methionine sulfoxide reductase AUC65_02052 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AUC65_02053 PF07883 Cupin domain AUC65_02053 PF12833 Helix-turn-helix domain AUC65_02054 PF01055 Glycosyl hydrolases family 31 AUC65_02054 PF13802 Galactose mutarotase-like AUC65_02055 PF13347 MFS/sugar transport protein AUC65_02056 PF07883 Cupin domain AUC65_02056 PF12833 Helix-turn-helix domain AUC65_02057 PF01433 Peptidase family M1 AUC65_02057 PF11838 ERAP1-like C-terminal domain AUC65_02058 PF00324 Amino acid permease AUC65_02059 PF02574 Homocysteine S-methyltransferase AUC65_02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 AUC65_02061 PF00004 ATPase family associated with various cellular activities (AAA) AUC65_02061 PF02151 UvrB/uvrC motif AUC65_02061 PF07724 AAA domain (Cdc48 subfamily) AUC65_02061 PF10431 C-terminal, D2-small domain, of ClpB protein AUC65_02062 PF12706 Beta-lactamase superfamily domain AUC65_02063 PF13416 Bacterial extracellular solute-binding protein AUC65_02064 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02065 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02066 PF00005 ABC transporter AUC65_02067 PF06028 Alpha/beta hydrolase of unknown function (DUF915) AUC65_02069 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_02069 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_02070 PF00440 Bacterial regulatory proteins, tetR family AUC65_02072 PF07859 alpha/beta hydrolase fold AUC65_02075 PF04221 RelB antitoxin AUC65_02086 PF01944 AUC65_02086 AUC65_02087 PF00534 Glycosyl transferases group 1 AUC65_02088 PF00534 Glycosyl transferases group 1 AUC65_02091 PF13731 AUC65_02091 AUC65_02092 PF06030 AUC65_02092 AUC65_02092 PF11797 AUC65_02092 AUC65_02094 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUC65_02094 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AUC65_02095 PF00106 short chain dehydrogenase AUC65_02096 PF05043 Mga helix-turn-helix domain AUC65_02097 PF02652 AUC65_02097 AUC65_02098 PF00248 Aldo/keto reductase family AUC65_02099 PF00156 Phosphoribosyl transferase domain AUC65_02100 PF00860 Permease family AUC65_02101 PF13472 GDSL-like Lipase/Acylhydrolase family AUC65_02102 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AUC65_02102 PF07992 Pyridine nucleotide-disulphide oxidoreductase AUC65_02104 PF00085 Thioredoxin AUC65_02106 PF00005 ABC transporter AUC65_02106 PF00664 ABC transporter transmembrane region AUC65_02107 PF00005 ABC transporter AUC65_02107 PF00664 ABC transporter transmembrane region AUC65_02108 PF00664 ABC transporter transmembrane region AUC65_02109 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AUC65_02110 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02111 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02112 PF00005 ABC transporter AUC65_02112 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_02113 PF00005 ABC transporter AUC65_02113 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AUC65_02114 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AUC65_02114 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AUC65_02115 PF00288 GHMP kinases N terminal domain AUC65_02115 PF08544 GHMP kinases C terminal AUC65_02115 PF10509 Galactokinase galactose-binding signature AUC65_02116 PF13347 MFS/sugar transport protein AUC65_02117 PF02311 AraC-like ligand binding domain AUC65_02117 PF12833 Helix-turn-helix domain AUC65_02118 PF13303 AUC65_02118 AUC65_02119 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AUC65_02119 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AUC65_02120 PF00155 Aminotransferase class I and II AUC65_02122 PF02378 Phosphotransferase system, EIIC AUC65_02123 PF00232 Glycosyl hydrolase family 1 AUC65_02124 PF00232 Glycosyl hydrolase family 1 AUC65_02125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AUC65_02126 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AUC65_02127 PF01063 Aminotransferase class IV AUC65_02130 PF00535 Glycosyl transferase family 2 AUC65_02131 PF08240 Alcohol dehydrogenase GroES-like domain AUC65_02131 PF13602 Zinc-binding dehydrogenase AUC65_02132 PF04892 AUC65_02132 AUC65_02133 PF00579 tRNA synthetases class I (W and Y) AUC65_02133 PF01479 S4 domain AUC65_02134 PF01925 AUC65_02134 AUC65_02135 PF13460 NADH(P)-binding AUC65_02137 PF00746 AUC65_02137 AUC65_02140 PF06458 MucBP domain AUC65_02141 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_02142 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AUC65_02142 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AUC65_02143 PF01380 SIS domain AUC65_02143 PF01418 Helix-turn-helix domain, rpiR family AUC65_02145 PF00248 Aldo/keto reductase family AUC65_02146 PF04226 AUC65_02146 AUC65_02147 PF01521 Iron-sulphur cluster biosynthesis AUC65_02159 PF00152 tRNA synthetases class II (D, K and N) AUC65_02159 PF01336 OB-fold nucleic acid binding domain AUC65_02160 PF01430 Hsp33 protein AUC65_02161 PF00004 ATPase family associated with various cellular activities (AAA) AUC65_02161 PF01434 Peptidase family M41 AUC65_02161 PF06480 FtsH Extracellular AUC65_02162 PF00156 Phosphoribosyl transferase domain AUC65_02163 PF01171 PP-loop family AUC65_02164 PF04977 Septum formation initiator AUC65_02165 PF01479 S4 domain AUC65_02166 PF01943 AUC65_02166 AUC65_02166 PF14667 Polysaccharide biosynthesis C-terminal domain AUC65_02167 PF00270 DEAD/DEAH box helicase AUC65_02167 PF00271 Helicase conserved C-terminal domain AUC65_02167 PF02559 CarD-like/TRCF domain AUC65_02167 PF03461 TRCF domain AUC65_02168 PF01195 Peptidyl-tRNA hydrolase AUC65_02169 PF00128 Alpha amylase, catalytic domain AUC65_02170 PF00343 Carbohydrate phosphorylase AUC65_02171 PF00534 Glycosyl transferases group 1 AUC65_02171 PF08323 Starch synthase catalytic domain AUC65_02172 PF00483 Nucleotidyl transferase AUC65_02173 PF00483 Nucleotidyl transferase AUC65_02174 PF00128 Alpha amylase, catalytic domain AUC65_02174 PF02806 Alpha amylase, C-terminal all-beta domain AUC65_02174 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AUC65_02176 PF12698 ABC-2 family transporter protein AUC65_02177 PF00440 Bacterial regulatory proteins, tetR family AUC65_02177 PF14278 AUC65_02177 AUC65_02178 PF00571 CBS domain AUC65_02179 PF05913 Bacterial protein of unknown function (DUF871) AUC65_02180 PF02378 Phosphotransferase system, EIIC AUC65_02181 PF07690 Major Facilitator Superfamily AUC65_02183 PF01476 LysM domain AUC65_02184 PF00248 Aldo/keto reductase family AUC65_02185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AUC65_02185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AUC65_02186 PF01261 Xylose isomerase-like TIM barrel AUC65_02187 PF00480 ROK family AUC65_02188 PF13347 MFS/sugar transport protein AUC65_02189 PF04616 Glycosyl hydrolases family 43 AUC65_02190 PF00083 Sugar (and other) transporter AUC65_02191 PF03631 AUC65_02191 AUC65_02192 PF06738 AUC65_02192 AUC65_02193 PF12821 AUC65_02193 AUC65_02194 PF03352 Methyladenine glycosylase AUC65_02195 PF02673 AUC65_02195 AUC65_02196 PF13349 AUC65_02196 AUC65_02198 PF03551 Transcriptional regulator PadR-like family AUC65_02199 PF04024 AUC65_02199 AUC65_02200 PF01773 Na+ dependent nucleoside transporter N-terminus AUC65_02200 PF07662 Na+ dependent nucleoside transporter C-terminus AUC65_02201 PF00149 Calcineurin-like phosphoesterase AUC65_02201 PF02872 5'-nucleotidase, C-terminal domain AUC65_02202 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02203 PF00528 Binding-protein-dependent transport system inner membrane component AUC65_02204 PF00005 ABC transporter AUC65_02205 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AUC65_02206 PF00232 Glycosyl hydrolase family 1 AUC65_02207 PF00232 Glycosyl hydrolase family 1 AUC65_02208 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AUC65_02208 PF00367 phosphotransferase system, EIIB AUC65_02208 PF02378 Phosphotransferase system, EIIC AUC65_02209 PF03816 Cell envelope-related transcriptional attenuator domain AUC65_02210 PF00303 Thymidylate synthase AUC65_02211 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AUC65_02212 PF06257 Protein of unknown function (DUF1021) AUC65_02213 PF00571 CBS domain AUC65_02213 PF01595 AUC65_02213 AUC65_02213 PF03471 Transporter associated domain AUC65_02214 PF00571 CBS domain AUC65_02214 PF01595 AUC65_02214 AUC65_02214 PF03471 Transporter associated domain AUC65_02215 PF00398 Ribosomal RNA adenine dimethylase AUC65_02216 PF13331 AUC65_02216 AUC65_02217 PF01026 TatD related DNase AUC65_02218 PF00999 Sodium/hydrogen exchanger family AUC65_02219 PF01588 Putative tRNA binding domain AUC65_02219 PF09334 tRNA synthetases class I (M) AUC65_02220 PF00190 Cupin AUC65_02232 PF02146 Sir2 family AUC65_02233 PF02146 Sir2 family AUC65_02238 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AUC65_02241 PF00376 MerR family regulatory protein AUC65_02243 PF00884 Sulfatase AUC65_02248 PF13673 Acetyltransferase (GNAT) domain AUC65_02251 PF01451 Low molecular weight phosphotyrosine protein phosphatase AUC65_02252 PF01381 Helix-turn-helix AUC65_02253 PF00665 Integrase core domain AUC65_02254 PF13460 NADH(P)-binding AUC65_02255 PF01638 HxlR-like helix-turn-helix AUC65_02256 PF00665 Integrase core domain AUC65_02257 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AUC65_02258 PF03167 Uracil DNA glycosylase superfamily AUC65_02259 PF13333 AUC65_02259 AUC65_02266 PF00122 E1-E2 ATPase AUC65_02266 PF00702 haloacid dehalogenase-like hydrolase AUC65_02267 PF00403 Heavy-metal-associated domain AUC65_02268 PF00210 Ferritin-like domain AUC65_02269 PF00027 Cyclic nucleotide-binding domain AUC65_02269 PF13545 Crp-like helix-turn-helix domain AUC65_02270 PF01988 AUC65_02270 AUC65_02271 PF00589 Phage integrase family AUC65_02273 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family