locus-tag class description IDM39_00025 PF00271 Helicase conserved C-terminal domain IDM39_00025 PF00176 SNF2 family N-terminal domain IDM39_00035 PF01555 DNA methylase IDM39_00035 PF18273 Type III R-M EcoP15I C-terminal domain IDM39_00040 PF04851 Type III restriction enzyme, res subunit IDM39_00040 PF08774 VRR-NUC domain IDM39_00050 PF00817 impB/mucB/samB family IDM39_00050 PF11799 impB/mucB/samB family C-terminal domain IDM39_00050 PF11798 IMS family HHH motif IDM39_00070 PF01443 Viral (Superfamily 1) RNA helicase IDM39_00070 PF03389 MobA/MobL family IDM39_00070 PF17841 BID domain of Bartonella effector protein (Bep) IDM39_00130 PF01402 Ribbon-helix-helix protein, copG family IDM39_00145 PF01131 DNA topoisomerase IDM39_00145 PF01751 Toprim domain IDM39_00165 PF00005 ABC transporter IDM39_00200 PF01051 Initiator Replication protein IDM39_00210 PF14480 DNA polymerase III polC-type N-terminus I IDM39_00210 PF00929 Exonuclease IDM39_00210 PF14579 Helix-hairpin-helix motif IDM39_00210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IDM39_00210 PF07733 Bacterial DNA polymerase III alpha NTPase domain IDM39_00210 PF11490 DNA polymerase III polC-type N-terminus II IDM39_00210 PF02811 PHP domain IDM39_00220 PF01022 Bacterial regulatory protein, arsR family IDM39_00225 PF00085 Thioredoxin IDM39_00230 PF00085 Thioredoxin IDM39_00235 PF01177 Asp/Glu/Hydantoin racemase IDM39_00240 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_00250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_00250 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_00255 PF00005 ABC transporter IDM39_00290 PF01051 Initiator Replication protein IDM39_00300 PF00929 Exonuclease IDM39_00300 PF14579 Helix-hairpin-helix motif IDM39_00300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IDM39_00300 PF02811 PHP domain IDM39_00300 PF11490 DNA polymerase III polC-type N-terminus II IDM39_00300 PF14480 DNA polymerase III polC-type N-terminus I IDM39_00300 PF07733 Bacterial DNA polymerase III alpha NTPase domain IDM39_00310 PF01022 Bacterial regulatory protein, arsR family IDM39_00315 PF00085 Thioredoxin IDM39_00320 PF00085 Thioredoxin IDM39_00325 PF01177 Asp/Glu/Hydantoin racemase IDM39_00330 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_00350 PF07731 Multicopper oxidase IDM39_00350 PF07732 Multicopper oxidase IDM39_00355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IDM39_00355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IDM39_00355 PF02770 Acyl-CoA dehydrogenase, middle domain IDM39_00360 PF01012 Electron transfer flavoprotein domain IDM39_00365 PF01012 Electron transfer flavoprotein domain IDM39_00365 PF00766 Electron transfer flavoprotein FAD-binding domain IDM39_00370 PF00115 Cytochrome C and Quinol oxidase polypeptide I IDM39_00380 PF01051 Initiator Replication protein IDM39_00395 PF02324 Glycosyl hydrolase family 70 IDM39_00395 PF01473 Putative cell wall binding repeat IDM39_00425 PF01566 Natural resistance-associated macrophage protein IDM39_00435 PF06257 Biofilm formation stimulator VEG IDM39_00440 PF00571 CBS domain IDM39_00440 PF03471 Transporter associated domain IDM39_00440 PF01595 Cyclin M transmembrane N-terminal domain IDM39_00445 PF00571 CBS domain IDM39_00445 PF01595 Cyclin M transmembrane N-terminal domain IDM39_00445 PF03471 Transporter associated domain IDM39_00450 PF00398 Ribosomal RNA adenine dimethylase IDM39_00455 PF13331 Domain of unknown function (DUF4093) IDM39_00460 PF01026 TatD related DNase IDM39_00465 PF00999 Sodium/hydrogen exchanger family IDM39_00470 PF09334 tRNA synthetases class I (M) IDM39_00470 PF08264 Anticodon-binding domain of tRNA IDM39_00470 PF01588 Putative tRNA binding domain IDM39_00490 PF00665 Integrase core domain IDM39_00490 PF13936 Helix-turn-helix domain IDM39_00510 PF13276 HTH-like domain IDM39_00510 PF00665 Integrase core domain IDM39_00510 PF13333 Integrase core domain IDM39_00545 PF02146 Sir2 family IDM39_00555 PF00368 Hydroxymethylglutaryl-coenzyme A reductase IDM39_00560 PF13411 MerR HTH family regulatory protein IDM39_00565 PF00884 Sulfatase IDM39_00570 PF13673 Acetyltransferase (GNAT) domain IDM39_00580 PF03989 DNA gyrase C-terminal domain, beta-propeller IDM39_00580 PF00521 DNA gyrase/topoisomerase IV, subunit A IDM39_00585 PF00204 DNA gyrase B IDM39_00585 PF00986 DNA gyrase B subunit, carboxyl terminus IDM39_00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_00585 PF01751 Toprim domain IDM39_00590 PF02463 RecF/RecN/SMC N terminal domain IDM39_00600 PF00712 DNA polymerase III beta subunit, N-terminal domain IDM39_00600 PF02767 DNA polymerase III beta subunit, central domain IDM39_00600 PF02768 DNA polymerase III beta subunit, C-terminal domain IDM39_00605 PF00308 Bacterial dnaA protein IDM39_00605 PF08299 Bacterial dnaA protein helix-turn-helix IDM39_00605 PF11638 DnaA N-terminal domain IDM39_00610 PF00468 Ribosomal protein L34 IDM39_00615 PF00825 Ribonuclease P IDM39_00620 PF02096 60Kd inner membrane protein IDM39_00625 PF10502 Signal peptidase, peptidase S26 IDM39_00630 PF00005 ABC transporter IDM39_00635 PF01032 FecCD transport family IDM39_00640 PF01497 Periplasmic binding protein IDM39_00660 PF02080 TrkA-C domain IDM39_00660 PF02254 TrkA-N domain IDM39_00665 PF00324 Amino acid permease IDM39_00685 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_00685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_00695 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_00695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_00705 PF02590 Predicted SPOUT methyltransferase IDM39_00710 PF02386 Cation transport protein IDM39_00715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IDM39_00720 PF00005 ABC transporter IDM39_00725 PF02687 FtsX-like permease family IDM39_00725 PF12704 MacB-like periplasmic core domain IDM39_00730 PF03176 MMPL family IDM39_00745 PF00075 RNase H IDM39_00765 PF05656 Protein of unknown function (DUF805) IDM39_00770 PF00860 Permease family IDM39_00780 PF00121 Triosephosphate isomerase IDM39_00805 PF07690 Major Facilitator Superfamily IDM39_00810 PF01161 Phosphatidylethanolamine-binding protein IDM39_00820 PF00857 Isochorismatase family IDM39_00830 PF01381 Helix-turn-helix IDM39_00840 PF00005 ABC transporter IDM39_00840 PF13732 Domain of unknown function (DUF4162) IDM39_00865 PF00232 Glycosyl hydrolase family 1 IDM39_00880 PF00480 ROK family IDM39_00885 PF13536 Putative multidrug resistance efflux transporter IDM39_00900 PF02449 Beta-galactosidase IDM39_00900 PF08533 Beta-galactosidase C-terminal domain IDM39_00900 PF08532 Beta-galactosidase trimerisation domain IDM39_00910 PF00072 Response regulator receiver domain IDM39_00910 PF12833 Helix-turn-helix domain IDM39_00920 PF02540 NAD synthase IDM39_00920 PF00117 Glutamine amidotransferase class-I IDM39_00920 PF00958 GMP synthase C terminal domain IDM39_00925 PF02608 ABC transporter substrate-binding protein PnrA-like IDM39_00930 PF00764 Arginosuccinate synthase IDM39_00940 PF02774 Semialdehyde dehydrogenase, dimerisation domain IDM39_00940 PF01118 Semialdehyde dehydrogenase, NAD binding domain IDM39_00945 PF01960 ArgJ family IDM39_00950 PF00696 Amino acid kinase family IDM39_00955 PF00202 Aminotransferase class-III IDM39_00965 PF00117 Glutamine amidotransferase class-I IDM39_00965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IDM39_00970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_00970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IDM39_00970 PF02142 MGS-like domain IDM39_00975 PF00905 Penicillin binding protein transpeptidase domain IDM39_00975 PF00912 Transglycosylase IDM39_00985 PF13520 Amino acid permease IDM39_00990 PF00005 ABC transporter IDM39_00990 PF13732 Domain of unknown function (DUF4162) IDM39_01010 PF13411 MerR HTH family regulatory protein IDM39_01020 PF03358 NADPH-dependent FMN reductase IDM39_01025 PF01938 TRAM domain IDM39_01025 PF05958 tRNA (Uracil-5-)-methyltransferase IDM39_01035 PF00892 EamA-like transporter family IDM39_01060 PF01047 MarR family IDM39_01075 PF00248 Aldo/keto reductase family IDM39_01085 PF00005 ABC transporter IDM39_01090 PF03649 Uncharacterised protein family (UPF0014) IDM39_01100 PF00005 ABC transporter IDM39_01110 PF00005 ABC transporter IDM39_01115 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_01120 PF00497 Bacterial extracellular solute-binding proteins, family 3 IDM39_01125 PF00497 Bacterial extracellular solute-binding proteins, family 3 IDM39_01130 PF00708 Acylphosphatase IDM39_01140 PF09924 Uncharacterised conserved protein (DUF2156) IDM39_01140 PF03706 Lysylphosphatidylglycerol synthase TM region IDM39_01150 PF01594 AI-2E family transporter IDM39_01155 PF01638 HxlR-like helix-turn-helix IDM39_01170 PF02655 ATP-grasp domain IDM39_01170 PF18419 ATP-grasp-like domain IDM39_01170 PF04262 Glutamate-cysteine ligase IDM39_01180 PF00324 Amino acid permease IDM39_01205 PF01207 Dihydrouridine synthase (Dus) IDM39_01210 PF00583 Acetyltransferase (GNAT) family IDM39_01220 PF03601 Conserved hypothetical protein 698 IDM39_01225 PF01381 Helix-turn-helix IDM39_01235 PF03601 Conserved hypothetical protein 698 IDM39_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_01240 PF03466 LysR substrate binding domain IDM39_01245 PF01144 Coenzyme A transferase IDM39_01250 PF03060 Nitronate monooxygenase IDM39_01265 PF01979 Amidohydrolase family IDM39_01280 PF06146 Phosphate-starvation-inducible E IDM39_01290 PF00817 impB/mucB/samB family IDM39_01290 PF11799 impB/mucB/samB family C-terminal domain IDM39_01290 PF11798 IMS family HHH motif IDM39_01300 PF03853 YjeF-related protein N-terminus IDM39_01310 PF00230 Major intrinsic protein IDM39_01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_01320 PF00561 alpha/beta hydrolase fold IDM39_01330 PF00005 ABC transporter IDM39_01350 PF04608 Phosphatidylglycerophosphatase A IDM39_01355 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_01355 PF00107 Zinc-binding dehydrogenase IDM39_01365 PF07690 Major Facilitator Superfamily IDM39_01370 PF06800 Sugar transport protein IDM39_01390 PF13520 Amino acid permease IDM39_01395 PF00324 Amino acid permease IDM39_01400 PF13520 Amino acid permease IDM39_01405 PF00710 Asparaginase, N-terminal IDM39_01405 PF17763 Glutaminase/Asparaginase C-terminal domain IDM39_01410 PF02229 Transcriptional Coactivator p15 (PC4) IDM39_01420 PF01209 ubiE/COQ5 methyltransferase family IDM39_01425 PF00857 Isochorismatase family IDM39_01430 PF03061 Thioesterase superfamily IDM39_01435 PF00378 Enoyl-CoA hydratase/isomerase IDM39_01440 PF00501 AMP-binding enzyme IDM39_01440 PF13193 AMP-binding enzyme C-terminal domain IDM39_01460 PF00072 Response regulator receiver domain IDM39_01460 PF00486 Transcriptional regulatory protein, C terminal IDM39_01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_01465 PF00512 His Kinase A (phospho-acceptor) domain IDM39_01485 PF00665 Integrase core domain IDM39_01485 PF13276 HTH-like domain IDM39_01485 PF13333 Integrase core domain IDM39_01515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IDM39_01520 PF14815 NUDIX domain IDM39_01520 PF00730 HhH-GPD superfamily base excision DNA repair protein IDM39_01525 PF01156 Inosine-uridine preferring nucleoside hydrolase IDM39_01530 PF02527 rRNA small subunit methyltransferase G IDM39_01535 PF13614 AAA domain IDM39_01540 PF17762 HTH domain found in ParB protein IDM39_01540 PF02195 ParB-like nuclease domain IDM39_01545 PF06107 Bacterial protein of unknown function (DUF951) IDM39_01550 PF01926 50S ribosome-binding GTPase IDM39_01550 PF06071 Protein of unknown function (DUF933) IDM39_01560 PF00486 Transcriptional regulatory protein, C terminal IDM39_01560 PF00072 Response regulator receiver domain IDM39_01565 PF00512 His Kinase A (phospho-acceptor) domain IDM39_01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_01570 PF00768 D-alanyl-D-alanine carboxypeptidase IDM39_01570 PF07943 Penicillin-binding protein 5, C-terminal domain IDM39_01625 PF00854 POT family IDM39_01630 PF07690 Major Facilitator Superfamily IDM39_01635 PF06800 Sugar transport protein IDM39_01640 PF00480 ROK family IDM39_01645 PF00083 Sugar (and other) transporter IDM39_01680 PF10263 SprT-like family IDM39_01685 PF01757 Acyltransferase family IDM39_01690 PF01047 MarR family IDM39_01700 PF00005 ABC transporter IDM39_01710 PF13173 AAA domain IDM39_01710 PF13635 Domain of unknown function (DUF4143) IDM39_01715 PF00005 ABC transporter IDM39_01715 PF12848 ABC transporter IDM39_01720 PF01554 MatE IDM39_01730 PF00392 Bacterial regulatory proteins, gntR family IDM39_01735 PF04616 Glycosyl hydrolases family 43 IDM39_01735 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain IDM39_01740 PF01306 LacY proton/sugar symporter IDM39_01750 PF00596 Class II Aldolase and Adducin N-terminal domain IDM39_01755 PF02610 L-arabinose isomerase IDM39_01755 PF11762 L-arabinose isomerase C-terminal domain IDM39_01760 PF00248 Aldo/keto reductase family IDM39_01780 PF00083 Sugar (and other) transporter IDM39_01785 PF00005 ABC transporter IDM39_01790 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_01835 PF01270 Glycosyl hydrolases family 8 IDM39_01840 PF02350 UDP-N-acetylglucosamine 2-epimerase IDM39_01855 PF01966 HD domain IDM39_01860 PF07690 Major Facilitator Superfamily IDM39_01870 PF02397 Bacterial sugar transferase IDM39_01875 PF00392 Bacterial regulatory proteins, gntR family IDM39_01875 PF07702 UTRA domain IDM39_01880 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase IDM39_01880 PF09364 XFP N-terminal domain IDM39_01880 PF09363 XFP C-terminal domain IDM39_01895 PF04230 Polysaccharide pyruvyl transferase IDM39_01920 PF02706 Chain length determinant protein IDM39_01920 PF13807 G-rich domain on putative tyrosine kinase IDM39_01930 PF13439 Glycosyltransferase Family 4 IDM39_01930 PF00534 Glycosyl transferases group 1 IDM39_01935 PF00535 Glycosyl transferase family 2 IDM39_01940 PF17102 Stealth protein CR3, conserved region 3 IDM39_01940 PF11380 Stealth protein CR2, conserved region 2 IDM39_01940 PF17101 Stealth protein CR1, conserved region 1 IDM39_01945 PF00535 Glycosyl transferase family 2 IDM39_01950 PF00535 Glycosyl transferase family 2 IDM39_01955 PF00535 Glycosyl transferase family 2 IDM39_01975 PF04230 Polysaccharide pyruvyl transferase IDM39_02025 PF05649 Peptidase family M13 IDM39_02025 PF01431 Peptidase family M13 IDM39_02030 PF00171 Aldehyde dehydrogenase family IDM39_02030 PF00465 Iron-containing alcohol dehydrogenase IDM39_02040 PF03372 Endonuclease/Exonuclease/phosphatase family IDM39_02060 PF00300 Histidine phosphatase superfamily (branch 1) IDM39_02065 PF01926 50S ribosome-binding GTPase IDM39_02065 PF13167 GTP-binding GTPase N-terminal IDM39_02065 PF16360 GTP-binding GTPase Middle Region IDM39_02080 PF00005 ABC transporter IDM39_02080 PF00664 ABC transporter transmembrane region IDM39_02085 PF00664 ABC transporter transmembrane region IDM39_02085 PF00005 ABC transporter IDM39_02090 PF13173 AAA domain IDM39_02090 PF13635 Domain of unknown function (DUF4143) IDM39_02095 PF13173 AAA domain IDM39_02095 PF13635 Domain of unknown function (DUF4143) IDM39_02100 PF00665 Integrase core domain IDM39_02100 PF13333 Integrase core domain IDM39_02100 PF13276 HTH-like domain IDM39_02110 PF13173 AAA domain IDM39_02110 PF13635 Domain of unknown function (DUF4143) IDM39_02145 PF12464 Maltose acetyltransferase IDM39_02145 PF14602 Hexapeptide repeat of succinyl-transferase IDM39_02155 PF01238 Phosphomannose isomerase type I IDM39_02160 PF08245 Mur ligase middle domain IDM39_02160 PF08353 Domain of unknown function (DUF1727) IDM39_02165 PF07685 CobB/CobQ-like glutamine amidotransferase domain IDM39_02175 PF00265 Thymidine kinase IDM39_02180 PF00472 RF-1 domain IDM39_02180 PF03462 PCRF domain IDM39_02185 PF17827 PrmC N-terminal domain IDM39_02185 PF05175 Methyltransferase small domain IDM39_02190 PF01300 Telomere recombination IDM39_02190 PF03481 Putative GTP-binding controlling metal-binding IDM39_02195 PF00464 Serine hydroxymethyltransferase IDM39_02205 PF11066 Protein of unknown function (DUF2867) IDM39_02205 PF13460 NAD(P)H-binding IDM39_02215 PF00860 Permease family IDM39_02220 PF00119 ATP synthase A chain IDM39_02225 PF00137 ATP synthase subunit C IDM39_02230 PF00430 ATP synthase B/B' CF(0) IDM39_02235 PF00213 ATP synthase delta (OSCP) subunit IDM39_02240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IDM39_02240 PF00306 ATP synthase alpha/beta chain, C terminal domain IDM39_02240 PF02874 ATP synthase alpha/beta family, beta-barrel domain IDM39_02245 PF00231 ATP synthase IDM39_02250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IDM39_02250 PF02874 ATP synthase alpha/beta family, beta-barrel domain IDM39_02255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IDM39_02255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IDM39_02260 PF02557 D-alanyl-D-alanine carboxypeptidase IDM39_02265 PF01712 Deoxynucleoside kinase IDM39_02270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IDM39_02270 PF02403 Seryl-tRNA synthetase N-terminal domain IDM39_02295 PF05848 CtsR N-terminal HTH domain IDM39_02295 PF17727 CtsR C-terminal dimerization domain IDM39_02300 PF10431 C-terminal, D2-small domain, of ClpB protein IDM39_02300 PF00004 ATPase family associated with various cellular activities (AAA) IDM39_02300 PF02861 Clp amino terminal domain, pathogenicity island component IDM39_02300 PF07724 AAA domain (Cdc48 subfamily) IDM39_02300 PF17871 AAA lid domain IDM39_02305 PF04563 RNA polymerase beta subunit IDM39_02305 PF04560 RNA polymerase Rpb2, domain 7 IDM39_02305 PF10385 RNA polymerase beta subunit external 1 domain IDM39_02305 PF04565 RNA polymerase Rpb2, domain 3 IDM39_02305 PF04561 RNA polymerase Rpb2, domain 2 IDM39_02305 PF00562 RNA polymerase Rpb2, domain 6 IDM39_02310 PF04997 RNA polymerase Rpb1, domain 1 IDM39_02310 PF00623 RNA polymerase Rpb1, domain 2 IDM39_02310 PF04983 RNA polymerase Rpb1, domain 3 IDM39_02310 PF05000 RNA polymerase Rpb1, domain 4 IDM39_02310 PF04998 RNA polymerase Rpb1, domain 5 IDM39_02325 PF00465 Iron-containing alcohol dehydrogenase IDM39_02360 PF08359 YsiA-like protein, C-terminal region IDM39_02360 PF00440 Bacterial regulatory proteins, tetR family IDM39_02365 PF08241 Methyltransferase domain IDM39_02410 PF01381 Helix-turn-helix IDM39_02425 PF03641 Possible lysine decarboxylase IDM39_02430 PF05175 Methyltransferase small domain IDM39_02435 PF14437 MafB19-like deaminase IDM39_02445 PF12169 DNA polymerase III subunits gamma and tau domain III IDM39_02450 PF02575 YbaB/EbfC DNA-binding family IDM39_02455 PF02132 RecR protein IDM39_02455 PF13662 Toprim domain IDM39_02470 PF02223 Thymidylate kinase IDM39_02475 PF06153 Cyclic-di-AMP receptor IDM39_02485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IDM39_02495 PF16363 GDP-mannose 4,6 dehydratase IDM39_02500 PF00814 Glycoprotease family IDM39_02505 PF00583 Acetyltransferase (GNAT) family IDM39_02515 PF00814 Glycoprotease family IDM39_02520 PF00348 Polyprenyl synthetase IDM39_02525 PF00338 Ribosomal protein S10p/S20e IDM39_02530 PF00297 Ribosomal protein L3 IDM39_02535 PF00573 Ribosomal protein L4/L1 family IDM39_02540 PF00276 Ribosomal protein L23 IDM39_02545 PF03947 Ribosomal Proteins L2, C-terminal domain IDM39_02545 PF00181 Ribosomal Proteins L2, RNA binding domain IDM39_02550 PF00203 Ribosomal protein S19 IDM39_02555 PF00237 Ribosomal protein L22p/L17e IDM39_02560 PF00189 Ribosomal protein S3, C-terminal domain IDM39_02560 PF07650 KH domain IDM39_02565 PF00252 Ribosomal protein L16p/L10e IDM39_02570 PF00831 Ribosomal L29 protein IDM39_02575 PF00366 Ribosomal protein S17 IDM39_02580 PF00238 Ribosomal protein L14p/L23e IDM39_02585 PF00467 KOW motif IDM39_02585 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IDM39_02590 PF00281 Ribosomal protein L5 IDM39_02590 PF00673 ribosomal L5P family C-terminus IDM39_02595 PF00410 Ribosomal protein S8 IDM39_02600 PF00347 Ribosomal protein L6 IDM39_02605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IDM39_02610 PF00333 Ribosomal protein S5, N-terminal domain IDM39_02610 PF03719 Ribosomal protein S5, C-terminal domain IDM39_02615 PF00327 Ribosomal protein L30p/L7e IDM39_02620 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IDM39_02625 PF00344 SecY translocase IDM39_02630 PF05191 Adenylate kinase, active site lid IDM39_02635 PF01176 Translation initiation factor 1A / IF-1 IDM39_02640 PF00444 Ribosomal protein L36 IDM39_02645 PF00416 Ribosomal protein S13/S18 IDM39_02650 PF00411 Ribosomal protein S11 IDM39_02655 PF01000 RNA polymerase Rpb3/RpoA insert domain IDM39_02655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IDM39_02655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IDM39_02660 PF01196 Ribosomal protein L17 IDM39_02680 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_02685 PF00005 ABC transporter IDM39_02685 PF09383 NIL domain IDM39_02690 PF03180 NLPA lipoprotein IDM39_02700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IDM39_02700 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain IDM39_02700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IDM39_02705 PF02540 NAD synthase IDM39_02710 PF00890 FAD binding domain IDM39_02710 PF04205 FMN-binding domain IDM39_02710 PF03358 NADPH-dependent FMN reductase IDM39_02715 PF02424 ApbE family IDM39_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_02725 PF03466 LysR substrate binding domain IDM39_02730 PF10415 Fumarase C C-terminus IDM39_02730 PF00206 Lyase IDM39_02735 PF14537 Cytochrome c3 IDM39_02735 PF00890 FAD binding domain IDM39_02740 PF00939 Sodium:sulfate symporter transmembrane region IDM39_02745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IDM39_02745 PF00056 lactate/malate dehydrogenase, NAD binding domain IDM39_02750 PF02436 Conserved carboxylase domain IDM39_02750 PF00682 HMGL-like IDM39_02750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_02750 PF00289 Biotin carboxylase, N-terminal domain IDM39_02750 PF02785 Biotin carboxylase C-terminal domain IDM39_02750 PF00364 Biotin-requiring enzyme IDM39_02755 PF09190 DALR domain IDM39_02755 PF01406 tRNA synthetases class I (C) catalytic domain IDM39_02760 PF01053 Cys/Met metabolism PLP-dependent enzyme IDM39_02765 PF01717 Cobalamin-independent synthase, Catalytic domain IDM39_02770 PF03180 NLPA lipoprotein IDM39_02775 PF02664 S-Ribosylhomocysteinase (LuxS) IDM39_02780 PF00636 Ribonuclease III domain IDM39_02785 PF00588 SpoU rRNA Methylase family IDM39_02785 PF08032 RNA 2'-O ribose methyltransferase substrate binding IDM39_02795 PF00471 Ribosomal protein L33 IDM39_02800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IDM39_02805 PF00467 KOW motif IDM39_02805 PF02357 Transcription termination factor nusG IDM39_02810 PF03946 Ribosomal protein L11, N-terminal domain IDM39_02810 PF00298 Ribosomal protein L11, RNA binding domain IDM39_02815 PF00687 Ribosomal protein L1p/L10e family IDM39_02820 PF00466 Ribosomal protein L10 IDM39_02825 PF16320 Ribosomal protein L7/L12 dimerisation domain IDM39_02825 PF00542 Ribosomal protein L7/L12 C-terminal domain IDM39_02835 PF00005 ABC transporter IDM39_02840 PF00950 ABC 3 transport family IDM39_02845 PF01297 Zinc-uptake complex component A periplasmic IDM39_02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_02860 PF00005 ABC transporter IDM39_02865 PF00005 ABC transporter IDM39_02870 PF02361 Cobalt transport protein IDM39_02875 PF01416 tRNA pseudouridine synthase IDM39_02880 PF00572 Ribosomal protein L13 IDM39_02885 PF00380 Ribosomal protein S9/S16 IDM39_02890 PF00144 Beta-lactamase IDM39_02895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IDM39_02895 PF00205 Thiamine pyrophosphate enzyme, central domain IDM39_02895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IDM39_02910 PF03167 Uracil DNA glycosylase superfamily IDM39_02920 PF00248 Aldo/keto reductase family IDM39_02935 PF01569 PAP2 superfamily IDM39_02945 PF07690 Major Facilitator Superfamily IDM39_02950 PF17755 UvrA DNA-binding domain IDM39_02950 PF00005 ABC transporter IDM39_02950 PF17760 UvrA interaction domain IDM39_02960 PF03668 P-loop ATPase protein family IDM39_02965 PF01933 Uncharacterised protein family UPF0052 IDM39_02970 PF14527 WhiA LAGLIDADG-like domain IDM39_02970 PF10298 WhiA N-terminal LAGLIDADG-like domain IDM39_02970 PF02650 WhiA C-terminal HTH domain IDM39_02975 PF00574 Clp protease IDM39_02980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IDM39_02980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IDM39_02990 PF00367 phosphotransferase system, EIIB IDM39_02990 PF02378 Phosphotransferase system, EIIC IDM39_02995 PF01783 Ribosomal L32p protein family IDM39_03000 PF01566 Natural resistance-associated macrophage protein IDM39_03020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IDM39_03020 PF00056 lactate/malate dehydrogenase, NAD binding domain IDM39_03025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IDM39_03025 PF00205 Thiamine pyrophosphate enzyme, central domain IDM39_03025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IDM39_03030 PF03306 Alpha-acetolactate decarboxylase IDM39_03035 PF00107 Zinc-binding dehydrogenase IDM39_03035 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_03040 PF05257 CHAP domain IDM39_03040 PF01476 LysM domain IDM39_03045 PF00877 NlpC/P60 family IDM39_03055 PF00692 dUTPase IDM39_03060 PF18073 Rubredoxin metal binding domain IDM39_03070 PF00749 tRNA synthetases class I (E and Q), catalytic domain IDM39_03075 PF07517 SecA DEAD-like domain IDM39_03075 PF01043 SecA preprotein cross-linking domain IDM39_03075 PF07516 SecA Wing and Scaffold domain IDM39_03080 PF00472 RF-1 domain IDM39_03080 PF03462 PCRF domain IDM39_03090 PF02388 FemAB family IDM39_03095 PF08032 RNA 2'-O ribose methyltransferase substrate binding IDM39_03095 PF00588 SpoU rRNA Methylase family IDM39_03105 PF01638 HxlR-like helix-turn-helix IDM39_03110 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IDM39_03110 PF01409 tRNA synthetases class II core domain (F) IDM39_03115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IDM39_03115 PF01588 Putative tRNA binding domain IDM39_03115 PF03483 B3/4 domain IDM39_03115 PF03484 tRNA synthetase B5 domain IDM39_03115 PF03147 Ferredoxin-fold anticodon binding domain IDM39_03120 PF02618 YceG-like family IDM39_03125 PF00270 DEAD/DEAH box helicase IDM39_03125 PF00271 Helicase conserved C-terminal domain IDM39_03125 PF00570 HRDC domain IDM39_03125 PF16124 RecQ zinc-binding IDM39_03125 PF09382 RQC domain IDM39_03130 PF01272 Transcription elongation factor, GreA/GreB, C-term IDM39_03130 PF03449 Transcription elongation factor, N-terminal IDM39_03140 PF03717 Penicillin-binding Protein dimerisation domain IDM39_03140 PF00905 Penicillin binding protein transpeptidase domain IDM39_03145 PF01812 5-formyltetrahydrofolate cyclo-ligase family IDM39_03160 PF00480 ROK family IDM39_03170 PF01471 Putative peptidoglycan binding domain IDM39_03170 PF01476 LysM domain IDM39_03170 PF01510 N-acetylmuramoyl-L-alanine amidase IDM39_03175 PF05257 CHAP domain IDM39_03195 PF03009 Glycerophosphoryl diester phosphodiesterase family IDM39_03205 PF13411 MerR HTH family regulatory protein IDM39_03210 PF00120 Glutamine synthetase, catalytic domain IDM39_03210 PF03951 Glutamine synthetase, beta-Grasp domain IDM39_03240 PF00665 Integrase core domain IDM39_03240 PF13333 Integrase core domain IDM39_03240 PF13276 HTH-like domain IDM39_03255 PF00829 Ribosomal prokaryotic L21 protein IDM39_03260 PF01016 Ribosomal L27 protein IDM39_03280 PF00664 ABC transporter transmembrane region IDM39_03280 PF00005 ABC transporter IDM39_03285 PF00881 Nitroreductase family IDM39_03290 PF00425 chorismate binding enzyme IDM39_03295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IDM39_03295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IDM39_03295 PF16582 Middle domain of thiamine pyrophosphate IDM39_03300 PF00561 alpha/beta hydrolase fold IDM39_03305 PF13378 Enolase C-terminal domain-like IDM39_03305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IDM39_03320 PF01321 Creatinase/Prolidase N-terminal domain IDM39_03320 PF00557 Metallopeptidase family M24 IDM39_03335 PF02872 5'-nucleotidase, C-terminal domain IDM39_03340 PF06265 Protein of unknown function (DUF1027) IDM39_03345 PF13344 Haloacid dehalogenase-like hydrolase IDM39_03355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_03360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IDM39_03360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IDM39_03380 PF12849 PBP superfamily domain IDM39_03385 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_03390 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_03395 PF00005 ABC transporter IDM39_03400 PF00005 ABC transporter IDM39_03405 PF01895 PhoU domain IDM39_03410 PF02631 RecX family IDM39_03435 PF04167 Protein of unknown function (DUF402) IDM39_03445 PF00009 Elongation factor Tu GTP binding domain IDM39_03445 PF03144 Elongation factor Tu domain 2 IDM39_03445 PF16658 Class II release factor RF3, C-terminal domain IDM39_03455 PF07997 Protein of unknown function (DUF1694) IDM39_03465 PF05496 Holliday junction DNA helicase RuvB P-loop domain IDM39_03465 PF16193 AAA C-terminal domain IDM39_03465 PF12002 MgsA AAA+ ATPase C terminal IDM39_03475 PF00582 Universal stress protein family IDM39_03570 PF03006 Haemolysin-III related IDM39_03605 PF08264 Anticodon-binding domain of tRNA IDM39_03605 PF00133 tRNA synthetases class I (I, L, M and V) IDM39_03605 PF10458 Valyl tRNA synthetase tRNA binding arm IDM39_03615 PF02875 Mur ligase family, glutamate ligase domain IDM39_03615 PF08245 Mur ligase middle domain IDM39_03620 PF13439 Glycosyltransferase Family 4 IDM39_03620 PF00534 Glycosyl transferases group 1 IDM39_03635 PF00005 ABC transporter IDM39_03635 PF16326 ABC transporter C-terminal domain IDM39_03635 PF12848 ABC transporter IDM39_03640 PF00166 Chaperonin 10 Kd subunit IDM39_03645 PF00118 TCP-1/cpn60 chaperonin family IDM39_03650 PF13520 Amino acid permease IDM39_03660 PF01820 D-ala D-ala ligase N-terminus IDM39_03660 PF07478 D-ala D-ala ligase C-terminus IDM39_03670 PF01926 50S ribosome-binding GTPase IDM39_03680 PF01467 Cytidylyltransferase-like IDM39_03685 PF01966 HD domain IDM39_03695 PF13649 Methyltransferase domain IDM39_03700 PF05636 HIGH Nucleotidyl Transferase IDM39_03710 PF00488 MutS domain V IDM39_03710 PF05190 MutS family domain IV IDM39_03710 PF01624 MutS domain I IDM39_03710 PF05188 MutS domain II IDM39_03710 PF05192 MutS domain III IDM39_03715 PF01119 DNA mismatch repair protein, C-terminal domain IDM39_03715 PF08676 MutL C terminal dimerisation domain IDM39_03815 PF03129 Anticodon binding domain IDM39_03815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IDM39_03815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IDM39_03815 PF02824 TGS domain IDM39_03825 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IDM39_03830 PF00216 Bacterial DNA-binding protein IDM39_03840 PF02687 FtsX-like permease family IDM39_03840 PF12704 MacB-like periplasmic core domain IDM39_03845 PF00005 ABC transporter IDM39_03860 PF07155 ECF-type riboflavin transporter, S component IDM39_03865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IDM39_03865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IDM39_03870 PF02601 Exonuclease VII, large subunit IDM39_03870 PF13742 OB-fold nucleic acid binding domain IDM39_03875 PF02609 Exonuclease VII small subunit IDM39_03880 PF00348 Polyprenyl synthetase IDM39_03885 PF01728 FtsJ-like methyltransferase IDM39_03885 PF01479 S4 domain IDM39_03890 PF01316 Arginine repressor, DNA binding domain IDM39_03890 PF02863 Arginine repressor, C-terminal domain IDM39_03895 PF13476 AAA domain IDM39_03905 PF00625 Guanylate kinase IDM39_03910 PF01192 RNA polymerase Rpb6 IDM39_03915 PF09335 SNARE associated Golgi protein IDM39_03920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IDM39_03925 PF00575 S1 RNA binding domain IDM39_04035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IDM39_04040 PF12822 ECF transporter, substrate-specific component IDM39_04045 PF01654 Cytochrome bd terminal oxidase subunit I IDM39_04050 PF02322 Cytochrome bd terminal oxidase subunit II IDM39_04055 PF00664 ABC transporter transmembrane region IDM39_04055 PF00005 ABC transporter IDM39_04060 PF00664 ABC transporter transmembrane region IDM39_04060 PF00005 ABC transporter IDM39_04065 PF01476 LysM domain IDM39_04065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IDM39_04070 PF02222 ATP-grasp domain IDM39_04085 PF00313 'Cold-shock' DNA-binding domain IDM39_04090 PF00293 NUDIX domain IDM39_04100 PF01048 Phosphorylase superfamily IDM39_04105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IDM39_04110 PF01738 Dienelactone hydrolase family IDM39_04135 PF07972 NrdI Flavodoxin like IDM39_04140 PF00462 Glutaredoxin IDM39_04145 PF00317 Ribonucleotide reductase, all-alpha domain IDM39_04145 PF02867 Ribonucleotide reductase, barrel domain IDM39_04145 PF08343 Ribonucleotide reductase N-terminal IDM39_04150 PF00268 Ribonucleotide reductase, small chain IDM39_04160 PF02653 Branched-chain amino acid transport system / permease component IDM39_04165 PF00005 ABC transporter IDM39_04170 PF00654 Voltage gated chloride channel IDM39_04175 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IDM39_04180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IDM39_04185 PF02645 Uncharacterised protein, DegV family COG1307 IDM39_04190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IDM39_04190 PF00367 phosphotransferase system, EIIB IDM39_04190 PF02378 Phosphotransferase system, EIIC IDM39_04215 PF04085 rod shape-determining protein MreC IDM39_04225 PF00194 Eukaryotic-type carbonic anhydrase IDM39_04235 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_04240 PF00005 ABC transporter IDM39_04245 PF00497 Bacterial extracellular solute-binding proteins, family 3 IDM39_04250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IDM39_04250 PF00925 GTP cyclohydrolase II IDM39_04255 PF00731 AIR carboxylase IDM39_04260 PF02222 ATP-grasp domain IDM39_04260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IDM39_04265 PF01259 SAICAR synthetase IDM39_04280 PF00586 AIR synthase related protein, N-terminal domain IDM39_04280 PF02769 AIR synthase related protein, C-terminal domain IDM39_04280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IDM39_04285 PF13537 Glutamine amidotransferase domain IDM39_04285 PF00156 Phosphoribosyl transferase domain IDM39_04290 PF02769 AIR synthase related protein, C-terminal domain IDM39_04290 PF00586 AIR synthase related protein, N-terminal domain IDM39_04295 PF00551 Formyl transferase IDM39_04300 PF02142 MGS-like domain IDM39_04300 PF01808 AICARFT/IMPCHase bienzyme IDM39_04305 PF02843 Phosphoribosylglycinamide synthetase, C domain IDM39_04305 PF02844 Phosphoribosylglycinamide synthetase, N domain IDM39_04305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IDM39_04310 PF01268 Formate--tetrahydrofolate ligase IDM39_04325 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_04325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_04340 PF00324 Amino acid permease IDM39_04345 PF00391 PEP-utilising enzyme, mobile domain IDM39_04345 PF00224 Pyruvate kinase, barrel domain IDM39_04345 PF02887 Pyruvate kinase, alpha/beta domain IDM39_04355 PF04452 RNA methyltransferase IDM39_04375 PF02381 MraZ protein, putative antitoxin-like IDM39_04380 PF01795 MraW methylase family IDM39_04385 PF04977 Septum formation initiator IDM39_04390 PF03793 PASTA domain IDM39_04390 PF03717 Penicillin-binding Protein dimerisation domain IDM39_04390 PF00905 Penicillin binding protein transpeptidase domain IDM39_04395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IDM39_04395 PF00953 Glycosyl transferase family 4 IDM39_04400 PF02875 Mur ligase family, glutamate ligase domain IDM39_04400 PF08245 Mur ligase middle domain IDM39_04405 PF04101 Glycosyltransferase family 28 C-terminal domain IDM39_04405 PF03033 Glycosyltransferase family 28 N-terminal domain IDM39_04410 PF03799 Cell division protein FtsQ IDM39_04410 PF08478 POTRA domain, FtsQ-type IDM39_04415 PF11983 Membrane-attachment and polymerisation-promoting switch IDM39_04415 PF02491 SHS2 domain inserted in FTSA IDM39_04420 PF12327 FtsZ family, C-terminal domain IDM39_04420 PF00091 Tubulin/FtsZ family, GTPase domain IDM39_04425 PF04472 Cell division protein SepF IDM39_04440 PF05103 DivIVA protein IDM39_04445 PF08264 Anticodon-binding domain of tRNA IDM39_04445 PF00133 tRNA synthetases class I (I, L, M and V) IDM39_04445 PF06827 Zinc finger found in FPG and IleRS IDM39_04460 PF14490 Helix-hairpin-helix containing domain IDM39_04460 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IDM39_04460 PF13538 UvrD-like helicase C-terminal domain IDM39_04465 PF01709 Transcriptional regulator IDM39_04470 PF00860 Permease family IDM39_04490 PF08334 Type II secretion system (T2SS), protein G IDM39_04490 PF07963 Prokaryotic N-terminal methylation motif IDM39_04520 PF00871 Acetokinase family IDM39_04525 PF00271 Helicase conserved C-terminal domain IDM39_04525 PF17764 3′ DNA-binding domain (3′BD) IDM39_04525 PF18074 Primosomal protein N C-terminal domain IDM39_04525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IDM39_04525 PF04851 Type III restriction enzyme, res subunit IDM39_04530 PF02911 Formyl transferase, C-terminal domain IDM39_04530 PF00551 Formyl transferase IDM39_04535 PF01029 NusB family IDM39_04535 PF01189 16S rRNA methyltransferase RsmB/F IDM39_04545 PF00069 Protein kinase domain IDM39_04545 PF03793 PASTA domain IDM39_04550 PF03193 RsgA GTPase IDM39_04550 PF16745 RsgA N-terminal domain IDM39_04555 PF00834 Ribulose-phosphate 3 epimerase family IDM39_04565 PF00830 Ribosomal L28 family IDM39_04570 PF03780 Asp23 family, cell envelope-related function IDM39_04575 PF13684 Dihydroxyacetone kinase family IDM39_04575 PF02734 DAK2 domain IDM39_04615 PF00270 DEAD/DEAH box helicase IDM39_04615 PF00271 Helicase conserved C-terminal domain IDM39_04615 PF17191 RecG wedge domain IDM39_04620 PF02504 Fatty acid synthesis protein IDM39_04625 PF00550 Phosphopantetheine attachment site IDM39_04630 PF14622 Ribonuclease-III-like IDM39_04630 PF00035 Double-stranded RNA binding motif IDM39_04635 PF06470 SMC proteins Flexible Hinge Domain IDM39_04635 PF02463 RecF/RecN/SMC N terminal domain IDM39_04640 PF00448 SRP54-type protein, GTPase domain IDM39_04640 PF02881 SRP54-type protein, helical bundle domain IDM39_04645 PF04297 Putative helix-turn-helix protein, YlxM / p13 like IDM39_04650 PF00448 SRP54-type protein, GTPase domain IDM39_04650 PF02881 SRP54-type protein, helical bundle domain IDM39_04650 PF02978 Signal peptide binding domain IDM39_04670 PF00886 Ribosomal protein S16 IDM39_04675 PF14659 Phage integrase, N-terminal SAM-like domain IDM39_04675 PF00589 Phage integrase family IDM39_04690 PF01381 Helix-turn-helix IDM39_04855 PF00665 Integrase core domain IDM39_04855 PF13276 HTH-like domain IDM39_04855 PF13333 Integrase core domain IDM39_04885 PF10544 T5orf172 domain IDM39_04890 PF00665 Integrase core domain IDM39_04890 PF13333 Integrase core domain IDM39_04920 PF03741 Integral membrane protein TerC family IDM39_04930 PF00300 Histidine phosphatase superfamily (branch 1) IDM39_04935 PF01782 RimM N-terminal domain IDM39_04935 PF05239 PRC-barrel domain IDM39_04940 PF01746 tRNA (Guanine-1)-methyltransferase IDM39_04945 PF01245 Ribosomal protein L19 IDM39_04950 PF00375 Sodium:dicarboxylate symporter family IDM39_04955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IDM39_04955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IDM39_04960 PF01361 Tautomerase enzyme IDM39_04965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IDM39_04965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IDM39_04970 PF00877 NlpC/P60 family IDM39_04975 PF01712 Deoxynucleoside kinase IDM39_04980 PF01741 Large-conductance mechanosensitive channel, MscL IDM39_05050 PF05816 Toxic anion resistance protein (TelA) IDM39_05055 PF03960 ArsC family IDM39_05060 PF05389 Negative regulator of genetic competence (MecA) IDM39_05065 PF00232 Glycosyl hydrolase family 1 IDM39_05070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IDM39_05075 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IDM39_05080 PF00232 Glycosyl hydrolase family 1 IDM39_05085 PF02378 Phosphotransferase system, EIIC IDM39_05095 PF01432 Peptidase family M3 IDM39_05095 PF08439 Oligopeptidase F IDM39_05100 PF00230 Major intrinsic protein IDM39_05115 PF00356 Bacterial regulatory proteins, lacI family IDM39_05120 PF01321 Creatinase/Prolidase N-terminal domain IDM39_05120 PF00557 Metallopeptidase family M24 IDM39_05200 PF04127 DNA / pantothenate metabolism flavoprotein IDM39_05200 PF02441 Flavoprotein IDM39_05205 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal IDM39_05205 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal IDM39_05220 PF08239 Bacterial SH3 domain IDM39_05220 PF01520 N-acetylmuramoyl-L-alanine amidase IDM39_05225 PF13393 Histidyl-tRNA synthetase IDM39_05225 PF03129 Anticodon binding domain IDM39_05230 PF01336 OB-fold nucleic acid binding domain IDM39_05230 PF02938 GAD domain IDM39_05230 PF00152 tRNA synthetases class II (D, K and N) IDM39_05240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IDM39_05240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IDM39_05245 PF01165 Ribosomal protein S21 IDM39_05250 PF09424 Yqey-like protein IDM39_05255 PF02562 PhoH-like protein IDM39_05260 PF02130 Uncharacterized protein family UPF0054 IDM39_05265 PF01219 Prokaryotic diacylglycerol kinase IDM39_05270 PF01926 50S ribosome-binding GTPase IDM39_05270 PF07650 KH domain IDM39_05275 PF02565 Recombination protein O C terminal IDM39_05275 PF11967 Recombination protein O N terminal IDM39_05290 PF02091 Glycyl-tRNA synthetase alpha subunit IDM39_05295 PF02092 Glycyl-tRNA synthetase beta subunit IDM39_05305 PF03741 Integral membrane protein TerC family IDM39_05310 PF01042 Endoribonuclease L-PSP IDM39_05315 PF10282 Lactonase, 7-bladed beta-propeller IDM39_05320 PF01594 AI-2E family transporter IDM39_05325 PF00588 SpoU rRNA Methylase family IDM39_05330 PF01580 FtsK/SpoIIIE family IDM39_05330 PF17854 FtsK alpha domain IDM39_05330 PF09397 Ftsk gamma domain IDM39_05340 PF00005 ABC transporter IDM39_05340 PF13732 Domain of unknown function (DUF4162) IDM39_05355 PF01541 GIY-YIG catalytic domain IDM39_05355 PF02151 UvrB/uvrC motif IDM39_05355 PF08459 UvrC Helix-hairpin-helix N-terminal IDM39_05360 PF01926 50S ribosome-binding GTPase IDM39_05360 PF01018 GTP1/OBG IDM39_05360 PF09269 Domain of unknown function (DUF1967) IDM39_05365 PF09186 Domain of unknown function (DUF1949) IDM39_05365 PF01205 Uncharacterized protein family UPF0029 IDM39_05375 PF07690 Major Facilitator Superfamily IDM39_05380 PF00571 CBS domain IDM39_05380 PF00478 IMP dehydrogenase / GMP reductase domain IDM39_05385 PF00571 CBS domain IDM39_05385 PF00478 IMP dehydrogenase / GMP reductase domain IDM39_05390 PF13382 Adenine deaminase C-terminal domain IDM39_05390 PF01979 Amidohydrolase family IDM39_05395 PF07499 RuvA, C-terminal domain IDM39_05395 PF01330 RuvA N terminal domain IDM39_05400 PF17864 RuvB AAA lid domain IDM39_05400 PF05496 Holliday junction DNA helicase RuvB P-loop domain IDM39_05400 PF05491 RuvB C-terminal winged helix domain IDM39_05405 PF02547 Queuosine biosynthesis protein IDM39_05440 PF01702 Queuine tRNA-ribosyltransferase IDM39_05445 PF02699 Preprotein translocase subunit IDM39_05450 PF00817 impB/mucB/samB family IDM39_05450 PF11799 impB/mucB/samB family C-terminal domain IDM39_05455 PF01368 DHH family IDM39_05455 PF02272 DHHA1 domain IDM39_05460 PF00270 DEAD/DEAH box helicase IDM39_05460 PF00271 Helicase conserved C-terminal domain IDM39_05475 PF02595 Glycerate kinase family IDM39_05480 PF01411 tRNA synthetases class II (A) IDM39_05480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IDM39_05480 PF02272 DHHA1 domain IDM39_05485 PF06135 IreB regulatory phosphoprotein IDM39_05490 PF03652 Holliday junction resolvase IDM39_05495 PF06949 Protein of unknown function (DUF1292) IDM39_05500 PF06949 Protein of unknown function (DUF1292) IDM39_05510 PF00753 Metallo-beta-lactamase superfamily IDM39_05510 PF03772 Competence protein IDM39_05515 PF06144 DNA polymerase III, delta subunit IDM39_05520 PF00312 Ribosomal protein S15 IDM39_05525 PF01649 Ribosomal protein S20 IDM39_05530 PF17770 Ribonuclease J C-terminal domain IDM39_05530 PF00753 Metallo-beta-lactamase superfamily IDM39_05530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IDM39_05540 PF03143 Elongation factor Tu C-terminal domain IDM39_05540 PF03144 Elongation factor Tu domain 2 IDM39_05540 PF00009 Elongation factor Tu GTP binding domain IDM39_05555 PF05698 Bacterial trigger factor protein (TF) C-terminus IDM39_05555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IDM39_05555 PF05697 Bacterial trigger factor protein (TF) IDM39_05560 PF07724 AAA domain (Cdc48 subfamily) IDM39_05560 PF10431 C-terminal, D2-small domain, of ClpB protein IDM39_05560 PF06689 ClpX C4-type zinc finger IDM39_05565 PF01926 50S ribosome-binding GTPase IDM39_05585 PF01713 Smr domain IDM39_05585 PF00488 MutS domain V IDM39_05605 PF00085 Thioredoxin IDM39_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_05610 PF00986 DNA gyrase B subunit, carboxyl terminus IDM39_05610 PF01751 Toprim domain IDM39_05610 PF00204 DNA gyrase B IDM39_05615 PF03989 DNA gyrase C-terminal domain, beta-propeller IDM39_05615 PF00521 DNA gyrase/topoisomerase IV, subunit A IDM39_05620 PF03306 Alpha-acetolactate decarboxylase IDM39_05630 PF01546 Peptidase family M20/M25/M40 IDM39_05630 PF07687 Peptidase dimerisation domain IDM39_05645 PF02689 Helicase IDM39_05645 PF05970 PIF1-like helicase IDM39_05665 PF02698 DUF218 domain IDM39_05670 PF04973 Nicotinamide mononucleotide transporter IDM39_05705 PF00205 Thiamine pyrophosphate enzyme, central domain IDM39_05705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IDM39_05705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IDM39_05715 PF02913 FAD linked oxidases, C-terminal domain IDM39_05715 PF01565 FAD binding domain IDM39_05720 PF13089 Polyphosphate kinase N-terminal domain IDM39_05720 PF17941 Polyphosphate kinase C-terminal domain 1 IDM39_05720 PF13090 Polyphosphate kinase C-terminal domain 2 IDM39_05720 PF02503 Polyphosphate kinase middle domain IDM39_05725 PF02541 Ppx/GppA phosphatase family IDM39_05730 PF00107 Zinc-binding dehydrogenase IDM39_05730 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_05740 PF13333 Integrase core domain IDM39_05740 PF00665 Integrase core domain IDM39_05740 PF13276 HTH-like domain IDM39_05775 PF02913 FAD linked oxidases, C-terminal domain IDM39_05775 PF01565 FAD binding domain IDM39_05780 PF00155 Aminotransferase class I and II IDM39_05785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IDM39_05785 PF00056 lactate/malate dehydrogenase, NAD binding domain IDM39_05790 PF03180 NLPA lipoprotein IDM39_05795 PF03180 NLPA lipoprotein IDM39_05810 PF02110 Hydroxyethylthiazole kinase family IDM39_05820 PF02581 Thiamine monophosphate synthase IDM39_05840 PF00106 short chain dehydrogenase IDM39_05850 PF00480 ROK family IDM39_05930 PF13419 Haloacid dehalogenase-like hydrolase IDM39_05935 PF01177 Asp/Glu/Hydantoin racemase IDM39_05940 PF01725 Ham1 family IDM39_05960 PF07693 KAP family P-loop domain IDM39_05970 PF04607 Region found in RelA / SpoT proteins IDM39_05975 PF01513 ATP-NAD kinase IDM39_05980 PF00849 RNA pseudouridylate synthase IDM39_05985 PF01769 Divalent cation transporter IDM39_05985 PF03448 MgtE intracellular N domain IDM39_05985 PF00571 CBS domain IDM39_05990 PF07690 Major Facilitator Superfamily IDM39_06005 PF01987 Mitochondrial biogenesis AIM24 IDM39_06015 PF00005 ABC transporter IDM39_06015 PF12848 ABC transporter IDM39_06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_06050 PF03466 LysR substrate binding domain IDM39_06060 PF00248 Aldo/keto reductase family IDM39_06065 PF02627 Carboxymuconolactone decarboxylase family IDM39_06075 PF01047 MarR family IDM39_06080 PF00583 Acetyltransferase (GNAT) family IDM39_06095 PF01545 Cation efflux family IDM39_06095 PF16916 Dimerisation domain of Zinc Transporter IDM39_06145 PF12822 ECF transporter, substrate-specific component IDM39_06150 PF00893 Small Multidrug Resistance protein IDM39_06155 PF01177 Asp/Glu/Hydantoin racemase IDM39_06175 PF14552 Tautomerase enzyme IDM39_06180 PF01266 FAD dependent oxidoreductase IDM39_06200 PF02567 Phenazine biosynthesis-like protein IDM39_06205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IDM39_06205 PF02378 Phosphotransferase system, EIIC IDM39_06205 PF00367 phosphotransferase system, EIIB IDM39_06210 PF00251 Glycosyl hydrolases family 32 N-terminal domain IDM39_06210 PF08244 Glycosyl hydrolases family 32 C terminal IDM39_06230 PF03176 MMPL family IDM39_06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_06245 PF03466 LysR substrate binding domain IDM39_06250 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_06250 PF13823 Alcohol dehydrogenase GroES-associated IDM39_06250 PF00107 Zinc-binding dehydrogenase IDM39_06260 PF14602 Hexapeptide repeat of succinyl-transferase IDM39_06260 PF12464 Maltose acetyltransferase IDM39_06265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IDM39_06270 PF01842 ACT domain IDM39_06270 PF02153 Prephenate dehydrogenase IDM39_06275 PF01202 Shikimate kinase IDM39_06280 PF07690 Major Facilitator Superfamily IDM39_06285 PF01264 Chorismate synthase IDM39_06315 PF01070 FMN-dependent dehydrogenase IDM39_06330 PF02576 RimP N-terminal domain IDM39_06330 PF17384 RimP C-terminal SH3 domain IDM39_06335 PF13184 NusA-like KH domain IDM39_06335 PF00575 S1 RNA binding domain IDM39_06335 PF08529 NusA N-terminal domain IDM39_06340 PF04296 Protein of unknown function (DUF448) IDM39_06345 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family IDM39_06350 PF00009 Elongation factor Tu GTP binding domain IDM39_06350 PF11987 Translation-initiation factor 2 IDM39_06350 PF04760 Translation initiation factor IF-2, N-terminal region IDM39_06355 PF02033 Ribosome-binding factor A IDM39_06360 PF01509 TruB family pseudouridylate synthase (N terminal domain) IDM39_06360 PF16198 tRNA pseudouridylate synthase B C-terminal domain IDM39_06365 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_06375 PF06574 FAD synthetase IDM39_06375 PF01687 Riboflavin kinase IDM39_06380 PF05670 NFACT protein RNA binding domain IDM39_06385 PF03932 CutC family IDM39_06400 PF11700 Vacuole effluxer Atg22 like IDM39_06405 PF02645 Uncharacterised protein, DegV family COG1307 IDM39_06410 PF02645 Uncharacterised protein, DegV family COG1307 IDM39_06415 PF13472 GDSL-like Lipase/Acylhydrolase family IDM39_06425 PF06855 YozE SAM-like fold IDM39_06430 PF01926 50S ribosome-binding GTPase IDM39_06435 PF01351 Ribonuclease HII IDM39_06440 PF18255 DNA processing protein A sterile alpha motif domain IDM39_06440 PF02481 DNA recombination-mediator protein A IDM39_06445 PF01396 Topoisomerase DNA binding C4 zinc finger IDM39_06445 PF01131 DNA topoisomerase IDM39_06445 PF01751 Toprim domain IDM39_06450 PF02899 Phage integrase, N-terminal SAM-like domain IDM39_06450 PF00589 Phage integrase family IDM39_06455 PF01263 Aldose 1-epimerase IDM39_06470 PF02660 Glycerol-3-phosphate acyltransferase IDM39_06475 PF01368 DHH family IDM39_06475 PF02833 DHHA2 domain IDM39_06490 PF00571 CBS domain IDM39_06490 PF00005 ABC transporter IDM39_06495 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_06505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_06510 PF03180 NLPA lipoprotein IDM39_06515 PF01625 Peptide methionine sulfoxide reductase IDM39_06520 PF00781 Diacylglycerol kinase catalytic domain IDM39_06525 PF13419 Haloacid dehalogenase-like hydrolase IDM39_06550 PF17770 Ribonuclease J C-terminal domain IDM39_06550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IDM39_06550 PF00753 Metallo-beta-lactamase superfamily IDM39_06555 PF07288 Protein of unknown function (DUF1447) IDM39_06570 PF01327 Polypeptide deformylase IDM39_06575 PF05256 Uncharacterised protein family (UPF0223) IDM39_06580 PF00459 Inositol monophosphatase family IDM39_06585 PF00679 Elongation factor G C-terminus IDM39_06585 PF14492 Elongation Factor G, domain II IDM39_06585 PF00009 Elongation factor Tu GTP binding domain IDM39_06585 PF03144 Elongation factor Tu domain 2 IDM39_06590 PF01098 Cell cycle protein IDM39_06595 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) IDM39_06605 PF01467 Cytidylyltransferase-like IDM39_06610 PF13180 PDZ domain IDM39_06610 PF05362 Lon protease (S16) C-terminal proteolytic domain IDM39_06615 PF07690 Major Facilitator Superfamily IDM39_06625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IDM39_06630 PF01380 SIS domain IDM39_06695 PF13276 HTH-like domain IDM39_06695 PF00665 Integrase core domain IDM39_06695 PF13333 Integrase core domain IDM39_06710 PF03632 Glycosyl hydrolase family 65 central catalytic domain IDM39_06710 PF03636 Glycosyl hydrolase family 65, N-terminal domain IDM39_06710 PF03633 Glycosyl hydrolase family 65, C-terminal domain IDM39_06715 PF01263 Aldose 1-epimerase IDM39_06720 PF13419 Haloacid dehalogenase-like hydrolase IDM39_06735 PF00665 Integrase core domain IDM39_06735 PF13276 HTH-like domain IDM39_06735 PF13333 Integrase core domain IDM39_06745 PF00166 Chaperonin 10 Kd subunit IDM39_06750 PF00118 TCP-1/cpn60 chaperonin family IDM39_06755 PF01610 Transposase IDM39_06755 PF13683 Integrase core domain IDM39_06760 PF00005 ABC transporter IDM39_06760 PF01476 LysM domain IDM39_06790 PF10410 DnaB-helicase binding domain of primase IDM39_06790 PF08275 DNA primase catalytic core, N-terminal domain IDM39_06790 PF01807 CHC2 zinc finger IDM39_06795 PF04545 Sigma-70, region 4 IDM39_06795 PF04542 Sigma-70 region 2 IDM39_06795 PF03979 Sigma-70 factor, region 1.1 IDM39_06795 PF00140 Sigma-70 factor, region 1.2 IDM39_06795 PF04539 Sigma-70 region 3 IDM39_06815 PF07690 Major Facilitator Superfamily IDM39_06820 PF02324 Glycosyl hydrolase family 70 IDM39_06820 PF01473 Putative cell wall binding repeat IDM39_06825 PF00486 Transcriptional regulatory protein, C terminal IDM39_06825 PF00072 Response regulator receiver domain IDM39_06830 PF00512 His Kinase A (phospho-acceptor) domain IDM39_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_06835 PF00485 Phosphoribulokinase / Uridine kinase family IDM39_06840 PF05343 M42 glutamyl aminopeptidase IDM39_06845 PF14794 Domain of unknown function (DUF4479) IDM39_06845 PF01588 Putative tRNA binding domain IDM39_06855 PF01225 Mur ligase family, catalytic domain IDM39_06855 PF02875 Mur ligase family, glutamate ligase domain IDM39_06855 PF08245 Mur ligase middle domain IDM39_06860 PF01027 Inhibitor of apoptosis-promoting Bax1 IDM39_06865 PF00476 DNA polymerase family A IDM39_06865 PF01367 5'-3' exonuclease, C-terminal SAM fold IDM39_06865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IDM39_06870 PF06827 Zinc finger found in FPG and IleRS IDM39_06870 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IDM39_06870 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IDM39_06875 PF01121 Dephospho-CoA kinase IDM39_06885 PF01695 IstB-like ATP binding protein IDM39_06885 PF07319 Primosomal protein DnaI N-terminus IDM39_06900 PF00072 Response regulator receiver domain IDM39_06900 PF00486 Transcriptional regulatory protein, C terminal IDM39_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_06905 PF00512 His Kinase A (phospho-acceptor) domain IDM39_06905 PF18719 ArlS sensor domain IDM39_06915 PF05257 CHAP domain IDM39_06915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IDM39_06925 PF00665 Integrase core domain IDM39_06925 PF13276 HTH-like domain IDM39_06925 PF13333 Integrase core domain IDM39_06935 PF13520 Amino acid permease IDM39_06950 PF02096 60Kd inner membrane protein IDM39_06960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IDM39_06960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IDM39_06970 PF01070 FMN-dependent dehydrogenase IDM39_06975 PF08544 GHMP kinases C terminal IDM39_06975 PF00288 GHMP kinases N terminal domain IDM39_06985 PF10509 Galactokinase galactose-binding signature IDM39_06985 PF08544 GHMP kinases C terminal IDM39_06985 PF00288 GHMP kinases N terminal domain IDM39_06990 PF13307 Helicase C-terminal domain IDM39_06990 PF04851 Type III restriction enzyme, res subunit IDM39_06990 PF00929 Exonuclease IDM39_07000 PF00152 tRNA synthetases class II (D, K and N) IDM39_07000 PF01336 OB-fold nucleic acid binding domain IDM39_07005 PF07261 Replication initiation and membrane attachment IDM39_07010 PF00905 Penicillin binding protein transpeptidase domain IDM39_07010 PF00912 Transglycosylase IDM39_07015 PF03838 Recombination protein U IDM39_07020 PF06908 YspA SLOG family IDM39_07025 PF05103 DivIVA protein IDM39_07035 PF01170 Putative RNA methylase family UPF0020 IDM39_07035 PF02926 THUMP domain IDM39_07040 PF13361 UvrD-like helicase C-terminal domain IDM39_07040 PF00580 UvrD/REP helicase N-terminal domain IDM39_07045 PF01653 NAD-dependent DNA ligase adenylation domain IDM39_07045 PF00533 BRCA1 C Terminus (BRCT) domain IDM39_07045 PF12826 Helix-hairpin-helix motif IDM39_07045 PF03120 NAD-dependent DNA ligase OB-fold domain IDM39_07045 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IDM39_07065 PF17757 UvrB interaction domain IDM39_07065 PF02151 UvrB/uvrC motif IDM39_07065 PF12344 Ultra-violet resistance protein B IDM39_07065 PF04851 Type III restriction enzyme, res subunit IDM39_07065 PF00271 Helicase conserved C-terminal domain IDM39_07075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_07075 PF00289 Biotin carboxylase, N-terminal domain IDM39_07075 PF02785 Biotin carboxylase C-terminal domain IDM39_07080 PF01039 Carboxyl transferase domain IDM39_07085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IDM39_07090 PF00854 POT family IDM39_07095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IDM39_07105 PF01230 HIT domain IDM39_07110 PF00005 ABC transporter IDM39_07120 PF02390 Putative methyltransferase IDM39_07125 PF10702 Protein of unknown function (DUF2507) IDM39_07130 PF03747 ADP-ribosylglycohydrolase IDM39_07160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_07160 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_07165 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) IDM39_07170 PF00455 DeoR C terminal sensor domain IDM39_07170 PF08220 DeoR-like helix-turn-helix domain IDM39_07175 PF00294 pfkB family carbohydrate kinase IDM39_07180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IDM39_07180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IDM39_07185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IDM39_07190 PF13407 Periplasmic binding protein domain IDM39_07190 PF00356 Bacterial regulatory proteins, lacI family IDM39_07195 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_07195 PF00107 Zinc-binding dehydrogenase IDM39_07200 PF01384 Phosphate transporter family IDM39_07215 PF00232 Glycosyl hydrolase family 1 IDM39_07235 PF13520 Amino acid permease IDM39_07245 PF00009 Elongation factor Tu GTP binding domain IDM39_07245 PF06421 GTP-binding protein LepA C-terminus IDM39_07245 PF00679 Elongation factor G C-terminus IDM39_07255 PF00083 Sugar (and other) transporter IDM39_07265 PF02929 Beta galactosidase small chain IDM39_07270 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IDM39_07270 PF00703 Glycosyl hydrolases family 2 IDM39_07270 PF02837 Glycosyl hydrolases family 2, sugar binding domain IDM39_07275 PF10431 C-terminal, D2-small domain, of ClpB protein IDM39_07275 PF17871 AAA lid domain IDM39_07275 PF07724 AAA domain (Cdc48 subfamily) IDM39_07275 PF00004 ATPase family associated with various cellular activities (AAA) IDM39_07285 PF06177 QueT transporter IDM39_07295 PF13520 Amino acid permease IDM39_07300 PF00106 short chain dehydrogenase IDM39_07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_07305 PF03466 LysR substrate binding domain IDM39_07310 PF00390 Malic enzyme, N-terminal domain IDM39_07310 PF03949 Malic enzyme, NAD binding domain IDM39_07320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_07320 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_07335 PF00005 ABC transporter IDM39_07340 PF02687 FtsX-like permease family IDM39_07360 PF00253 Ribosomal protein S14p/S29e IDM39_07365 PF00471 Ribosomal protein L33 IDM39_07385 PF00871 Acetokinase family IDM39_07390 PF01546 Peptidase family M20/M25/M40 IDM39_07390 PF07687 Peptidase dimerisation domain IDM39_07395 PF01784 NIF3 (NGG1p interacting factor 3) IDM39_07400 PF04816 tRNA (adenine(22)-N(1))-methyltransferase IDM39_07405 PF00011 Hsp20/alpha crystallin family IDM39_07435 PF13344 Haloacid dehalogenase-like hydrolase IDM39_07435 PF00293 NUDIX domain IDM39_07455 PF13476 AAA domain IDM39_07460 PF00149 Calcineurin-like phosphoesterase IDM39_07460 PF12320 Type 5 capsule protein repressor C-terminal domain IDM39_07475 PF07155 ECF-type riboflavin transporter, S component IDM39_07480 PF08543 Phosphomethylpyrimidine kinase IDM39_07485 PF00216 Bacterial DNA-binding protein IDM39_07490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IDM39_07490 PF01926 50S ribosome-binding GTPase IDM39_07495 PF00575 S1 RNA binding domain IDM39_07500 PF02224 Cytidylate kinase IDM39_07510 PF00271 Helicase conserved C-terminal domain IDM39_07510 PF00270 DEAD/DEAH box helicase IDM39_07520 PF12822 ECF transporter, substrate-specific component IDM39_07530 PF06736 Protein of unknown function (DUF1211) IDM39_07535 PF00849 RNA pseudouridylate synthase IDM39_07535 PF01479 S4 domain IDM39_07540 PF04079 Segregation and condensation complex subunit ScpB IDM39_07545 PF02616 Segregation and condensation protein ScpA IDM39_07555 PF00589 Phage integrase family IDM39_07555 PF02899 Phage integrase, N-terminal SAM-like domain IDM39_07560 PF13509 S1 domain IDM39_07560 PF17783 CvfB-like winged helix domain IDM39_07570 PF00999 Sodium/hydrogen exchanger family IDM39_07580 PF02580 D-Tyr-tRNA(Tyr) deacylase IDM39_07585 PF02824 TGS domain IDM39_07585 PF13291 ACT domain IDM39_07585 PF04607 Region found in RelA / SpoT proteins IDM39_07590 PF14579 Helix-hairpin-helix motif IDM39_07590 PF02811 PHP domain IDM39_07590 PF01336 OB-fold nucleic acid binding domain IDM39_07590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IDM39_07590 PF07733 Bacterial DNA polymerase III alpha NTPase domain IDM39_07600 PF00186 Dihydrofolate reductase IDM39_07605 PF12848 ABC transporter IDM39_07605 PF00005 ABC transporter IDM39_07605 PF16326 ABC transporter C-terminal domain IDM39_07610 PF13735 tRNA nucleotidyltransferase domain 2 putative IDM39_07610 PF12627 Probable RNA and SrmB- binding site of polymerase A IDM39_07610 PF01743 Poly A polymerase head domain IDM39_07620 PF02517 CPBP intramembrane metalloprotease IDM39_07625 PF01380 SIS domain IDM39_07630 PF00909 Ammonium Transporter Family IDM39_07640 PF01473 Putative cell wall binding repeat IDM39_07640 PF02324 Glycosyl hydrolase family 70 IDM39_07645 PF03816 Cell envelope-related transcriptional attenuator domain IDM39_07650 PF00535 Glycosyl transferase family 2 IDM39_07665 PF00535 Glycosyl transferase family 2 IDM39_07670 PF17102 Stealth protein CR3, conserved region 3 IDM39_07670 PF11380 Stealth protein CR2, conserved region 2 IDM39_07670 PF17101 Stealth protein CR1, conserved region 1 IDM39_07675 PF00534 Glycosyl transferases group 1 IDM39_07675 PF13439 Glycosyltransferase Family 4 IDM39_07680 PF02397 Bacterial sugar transferase IDM39_07685 PF13614 AAA domain IDM39_07690 PF02706 Chain length determinant protein IDM39_07690 PF13807 G-rich domain on putative tyrosine kinase IDM39_07700 PF01765 Ribosome recycling factor IDM39_07705 PF00696 Amino acid kinase family IDM39_07710 PF00889 Elongation factor TS IDM39_07715 PF00318 Ribosomal protein S2 IDM39_07720 PF01541 GIY-YIG catalytic domain IDM39_07725 PF05175 Methyltransferase small domain IDM39_07730 PF01553 Acyltransferase IDM39_07735 PF00877 NlpC/P60 family IDM39_07740 PF00877 NlpC/P60 family IDM39_07750 PF03672 Uncharacterised protein family (UPF0154) IDM39_07755 PF05979 Bacterial protein of unknown function (DUF896) IDM39_07760 PF01726 LexA DNA binding domain IDM39_07760 PF00717 Peptidase S24-like IDM39_07775 PF00156 Phosphoribosyl transferase domain IDM39_07780 PF02272 DHHA1 domain IDM39_07780 PF17768 RecJ OB domain IDM39_07780 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IDM39_07780 PF01368 DHH family IDM39_07785 PF00753 Metallo-beta-lactamase superfamily IDM39_07785 PF12706 Beta-lactamase superfamily domain IDM39_07800 PF00684 DnaJ central domain IDM39_07800 PF01556 DnaJ C terminal domain IDM39_07800 PF00226 DnaJ domain IDM39_07805 PF00012 Hsp70 protein IDM39_07810 PF01025 GrpE IDM39_07815 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IDM39_07815 PF01628 HrcA protein C terminal domain IDM39_07835 PF01473 Putative cell wall binding repeat IDM39_07835 PF02324 Glycosyl hydrolase family 70 IDM39_07845 PF00535 Glycosyl transferase family 2 IDM39_07855 PF00535 Glycosyl transferase family 2 IDM39_07865 PF13457 GW (Gly-Tryp) dipeptide domain IDM39_07865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IDM39_07880 PF03275 UDP-galactopyranose mutase IDM39_07900 PF02397 Bacterial sugar transferase IDM39_07905 PF00557 Metallopeptidase family M24 IDM39_07920 PF00877 NlpC/P60 family IDM39_07925 PF01476 LysM domain IDM39_07925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IDM39_07935 PF00535 Glycosyl transferase family 2 IDM39_07950 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IDM39_07955 PF01061 ABC-2 type transporter IDM39_07960 PF00005 ABC transporter IDM39_07960 PF01476 LysM domain IDM39_07990 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IDM39_07995 PF01467 Cytidylyltransferase-like IDM39_08000 PF00535 Glycosyl transferase family 2 IDM39_08005 PF00483 Nucleotidyl transferase IDM39_08020 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IDM39_08030 PF07885 Ion channel IDM39_08030 PF02254 TrkA-N domain IDM39_08085 PF00877 NlpC/P60 family IDM39_08150 PF00535 Glycosyl transferase family 2 IDM39_08165 PF00990 Diguanylate cyclase, GGDEF domain IDM39_08200 PF02073 Thermophilic metalloprotease (M29) IDM39_08215 PF00849 RNA pseudouridylate synthase IDM39_08215 PF01479 S4 domain IDM39_08220 PF00313 'Cold-shock' DNA-binding domain IDM39_08230 PF07690 Major Facilitator Superfamily IDM39_08245 PF00485 Phosphoribulokinase / Uridine kinase family IDM39_08250 PF13538 UvrD-like helicase C-terminal domain IDM39_08260 PF00154 recA bacterial DNA recombination protein IDM39_08265 PF02464 Competence-damaged protein IDM39_08265 PF18146 Damage-inducible protein CinA KH domain IDM39_08265 PF00994 Probable molybdopterin binding domain IDM39_08270 PF01066 CDP-alcohol phosphatidyltransferase IDM39_08275 PF13464 Domain of unknown function (DUF4115) IDM39_08280 PF05193 Peptidase M16 inactive domain IDM39_08280 PF00675 Insulinase (Peptidase family M16) IDM39_08285 PF05193 Peptidase M16 inactive domain IDM39_08295 PF02447 GntP family permease IDM39_08300 PF00205 Thiamine pyrophosphate enzyme, central domain IDM39_08300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IDM39_08300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IDM39_08305 PF02447 GntP family permease IDM39_08310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IDM39_08310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IDM39_08315 PF01966 HD domain IDM39_08315 PF01336 OB-fold nucleic acid binding domain IDM39_08320 PF13514 AAA domain IDM39_08340 PF06133 Control of competence regulator ComK, YlbF/YmcA IDM39_08345 PF00912 Transglycosylase IDM39_08345 PF00905 Penicillin binding protein transpeptidase domain IDM39_08350 PF01316 Arginine repressor, DNA binding domain IDM39_08350 PF02863 Arginine repressor, C-terminal domain IDM39_08360 PF00005 ABC transporter IDM39_08360 PF00664 ABC transporter transmembrane region IDM39_08365 PF00664 ABC transporter transmembrane region IDM39_08365 PF00005 ABC transporter IDM39_08370 PF03485 Arginyl tRNA synthetase N terminal domain IDM39_08370 PF05746 DALR anticodon binding domain IDM39_08370 PF00750 tRNA synthetases class I (R) IDM39_08380 PF02875 Mur ligase family, glutamate ligase domain IDM39_08380 PF08245 Mur ligase middle domain IDM39_08385 PF01725 Ham1 family IDM39_08390 PF08245 Mur ligase middle domain IDM39_08390 PF02875 Mur ligase family, glutamate ligase domain IDM39_08395 PF00005 ABC transporter IDM39_08400 PF00950 ABC 3 transport family IDM39_08405 PF01297 Zinc-uptake complex component A periplasmic IDM39_08410 PF13936 Helix-turn-helix domain IDM39_08410 PF00665 Integrase core domain IDM39_08420 PF00781 Diacylglycerol kinase catalytic domain IDM39_08425 PF02637 GatB domain IDM39_08425 PF02934 GatB/GatE catalytic domain IDM39_08430 PF01425 Amidase IDM39_08435 PF02686 Glu-tRNAGln amidotransferase C subunit IDM39_08440 PF01189 16S rRNA methyltransferase RsmB/F IDM39_08440 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IDM39_08440 PF17126 RsmF rRNA methyltransferase first C-terminal domain IDM39_08450 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IDM39_08450 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IDM39_08450 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal IDM39_08465 PF03551 Transcriptional regulator PadR-like family IDM39_08475 PF01566 Natural resistance-associated macrophage protein IDM39_08490 PF00294 pfkB family carbohydrate kinase IDM39_08490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IDM39_08495 PF00248 Aldo/keto reductase family IDM39_08500 PF14572 Phosphoribosyl synthetase-associated domain IDM39_08500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IDM39_08505 PF09819 ABC-type cobalt transport system, permease component IDM39_08510 PF00005 ABC transporter IDM39_08525 PF01487 Type I 3-dehydroquinase IDM39_08530 PF01202 Shikimate kinase IDM39_08535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IDM39_08540 PF01264 Chorismate synthase IDM39_08545 PF01761 3-dehydroquinate synthase IDM39_08550 PF00793 DAHP synthetase I family IDM39_08550 PF18152 DAHP synthase ferredoxin-like domain IDM39_08555 PF01488 Shikimate / quinate 5-dehydrogenase IDM39_08555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IDM39_08555 PF08501 Shikimate dehydrogenase substrate binding domain IDM39_08570 PF12822 ECF transporter, substrate-specific component IDM39_08575 PF00155 Aminotransferase class I and II IDM39_08590 PF07722 Peptidase C26 IDM39_08595 PF01118 Semialdehyde dehydrogenase, NAD binding domain IDM39_08595 PF02774 Semialdehyde dehydrogenase, dimerisation domain IDM39_08600 PF00155 Aminotransferase class I and II IDM39_08605 PF05173 Dihydrodipicolinate reductase, C-terminus IDM39_08605 PF01113 Dihydrodipicolinate reductase, N-terminus IDM39_08610 PF00701 Dihydrodipicolinate synthetase family IDM39_08615 PF01546 Peptidase family M20/M25/M40 IDM39_08620 PF14602 Hexapeptide repeat of succinyl-transferase IDM39_08620 PF00132 Bacterial transferase hexapeptide (six repeats) IDM39_08620 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal IDM39_08625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IDM39_08625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IDM39_08630 PF00842 Alanine racemase, C-terminal domain IDM39_08630 PF01168 Alanine racemase, N-terminal domain IDM39_08635 PF00696 Amino acid kinase family IDM39_08635 PF13840 ACT domain IDM39_08645 PF00356 Bacterial regulatory proteins, lacI family IDM39_08650 PF08544 GHMP kinases C terminal IDM39_08650 PF00288 GHMP kinases N terminal domain IDM39_08655 PF12822 ECF transporter, substrate-specific component IDM39_08665 PF02742 Iron dependent repressor, metal binding and dimerisation domain IDM39_08665 PF01325 Iron dependent repressor, N-terminal DNA binding domain IDM39_08670 PF04203 Sortase domain IDM39_08685 PF02629 CoA binding domain IDM39_08685 PF06971 Putative DNA-binding protein N-terminus IDM39_08690 PF00271 Helicase conserved C-terminal domain IDM39_08690 PF00270 DEAD/DEAH box helicase IDM39_08695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IDM39_08700 PF01938 TRAM domain IDM39_08700 PF05958 tRNA (Uracil-5-)-methyltransferase IDM39_08710 PF01435 Peptidase family M48 IDM39_08715 PF04011 LemA family IDM39_08725 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IDM39_08730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IDM39_08730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IDM39_08730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IDM39_08730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IDM39_08735 PF02388 FemAB family IDM39_08745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IDM39_08750 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IDM39_08755 PF01039 Carboxyl transferase domain IDM39_08760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_08760 PF00289 Biotin carboxylase, N-terminal domain IDM39_08760 PF02785 Biotin carboxylase C-terminal domain IDM39_08765 PF07977 FabA-like domain IDM39_08770 PF00364 Biotin-requiring enzyme IDM39_08775 PF00109 Beta-ketoacyl synthase, N-terminal domain IDM39_08775 PF02801 Beta-ketoacyl synthase, C-terminal domain IDM39_08785 PF00698 Acyl transferase domain IDM39_08790 PF03060 Nitronate monooxygenase IDM39_08795 PF00550 Phosphopantetheine attachment site IDM39_08800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IDM39_08800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IDM39_08805 PF01047 MarR family IDM39_08810 PF07977 FabA-like domain IDM39_08820 PF10397 Adenylosuccinate lyase C-terminus IDM39_08820 PF00206 Lyase IDM39_08830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_08830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IDM39_08830 PF02142 MGS-like domain IDM39_08835 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IDM39_08835 PF00117 Glutamine amidotransferase class-I IDM39_08840 PF00156 Phosphoribosyl transferase domain IDM39_08845 PF00849 RNA pseudouridylate synthase IDM39_08845 PF01479 S4 domain IDM39_08855 PF13456 Reverse transcriptase-like IDM39_08860 PF03553 Na+/H+ antiporter family IDM39_08865 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IDM39_08870 PF00324 Amino acid permease IDM39_09090 PF00436 Single-strand binding protein family IDM39_09150 PF01381 Helix-turn-helix IDM39_09170 PF00589 Phage integrase family IDM39_09170 PF02899 Phage integrase, N-terminal SAM-like domain IDM39_09175 PF01197 Ribosomal protein L31 IDM39_09180 PF00009 Elongation factor Tu GTP binding domain IDM39_09180 PF00679 Elongation factor G C-terminus IDM39_09180 PF03144 Elongation factor Tu domain 2 IDM39_09180 PF06421 GTP-binding protein LepA C-terminus IDM39_09185 PF00248 Aldo/keto reductase family IDM39_09200 PF00334 Nucleoside diphosphate kinase IDM39_09205 PF13091 PLD-like domain IDM39_09205 PF13396 Phospholipase_D-nuclease N-terminal IDM39_09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IDM39_09210 PF03466 LysR substrate binding domain IDM39_09215 PF00162 Phosphoglycerate kinase IDM39_09220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IDM39_09220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IDM39_09255 PF01223 DNA/RNA non-specific endonuclease IDM39_09265 PF00300 Histidine phosphatase superfamily (branch 1) IDM39_09275 PF03613 PTS system mannose/fructose/sorbose family IID component IDM39_09280 PF03609 PTS system sorbose-specific iic component IDM39_09285 PF03610 PTS system fructose IIA component IDM39_09285 PF03830 PTS system sorbose subfamily IIB component IDM39_09295 PF03747 ADP-ribosylglycohydrolase IDM39_09355 PF00884 Sulfatase IDM39_09370 PF13439 Glycosyltransferase Family 4 IDM39_09370 PF00534 Glycosyl transferases group 1 IDM39_09375 PF13439 Glycosyltransferase Family 4 IDM39_09375 PF00534 Glycosyl transferases group 1 IDM39_09380 PF00156 Phosphoribosyl transferase domain IDM39_09385 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IDM39_09390 PF01180 Dihydroorotate dehydrogenase IDM39_09395 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IDM39_09395 PF02142 MGS-like domain IDM39_09395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IDM39_09400 PF00117 Glutamine amidotransferase class-I IDM39_09400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IDM39_09405 PF01979 Amidohydrolase family IDM39_09410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IDM39_09410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IDM39_09430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IDM39_09430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IDM39_09430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IDM39_09430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IDM39_09435 PF07949 YbbR-like protein IDM39_09440 PF02457 DisA bacterial checkpoint controller nucleotide-binding IDM39_09445 PF00999 Sodium/hydrogen exchanger family IDM39_09450 PF01565 FAD binding domain IDM39_09450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IDM39_09455 PF02811 PHP domain IDM39_09455 PF00929 Exonuclease IDM39_09455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IDM39_09455 PF07733 Bacterial DNA polymerase III alpha NTPase domain IDM39_09455 PF11490 DNA polymerase III polC-type N-terminus II IDM39_09455 PF14579 Helix-hairpin-helix motif IDM39_09465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IDM39_09470 PF01515 Phosphate acetyl/butaryl transferase IDM39_09475 PF03167 Uracil DNA glycosylase superfamily IDM39_09485 PF00893 Small Multidrug Resistance protein IDM39_09490 PF00893 Small Multidrug Resistance protein IDM39_09495 PF00005 ABC transporter IDM39_09500 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09505 PF07690 Major Facilitator Superfamily IDM39_09520 PF01668 SmpB protein IDM39_09525 PF17876 Cold shock domain IDM39_09525 PF08206 Ribonuclease B OB domain IDM39_09525 PF00773 RNB domain IDM39_09525 PF00575 S1 RNA binding domain IDM39_09535 PF07690 Major Facilitator Superfamily IDM39_09540 PF01425 Amidase IDM39_09545 PF00113 Enolase, C-terminal TIM barrel domain IDM39_09545 PF03952 Enolase, N-terminal domain IDM39_09560 PF00121 Triosephosphate isomerase IDM39_09565 PF00391 PEP-utilising enzyme, mobile domain IDM39_09565 PF02896 PEP-utilising enzyme, TIM barrel domain IDM39_09565 PF05524 PEP-utilising enzyme, N-terminal IDM39_09570 PF00381 PTS HPr component phosphorylation site IDM39_09580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IDM39_09580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IDM39_09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_09610 PF00483 Nucleotidyl transferase IDM39_09615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IDM39_09615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IDM39_09620 PF07475 HPr Serine kinase C-terminal domain IDM39_09620 PF02603 HPr Serine kinase N terminus IDM39_09625 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV IDM39_09635 PF00582 Universal stress protein family IDM39_09645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IDM39_09650 PF13416 Bacterial extracellular solute-binding protein IDM39_09655 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09660 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09665 PF00005 ABC transporter IDM39_09665 PF08402 TOBE domain IDM39_09680 PF03144 Elongation factor Tu domain 2 IDM39_09680 PF00679 Elongation factor G C-terminus IDM39_09680 PF00009 Elongation factor Tu GTP binding domain IDM39_09680 PF03764 Elongation factor G, domain IV IDM39_09680 PF14492 Elongation Factor G, domain II IDM39_09685 PF00177 Ribosomal protein S7p/S5e IDM39_09690 PF00164 Ribosomal protein S12/S23 IDM39_09700 PF00005 ABC transporter IDM39_09700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_09705 PF00005 ABC transporter IDM39_09705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_09710 PF12911 N-terminal TM domain of oligopeptide transport permease C IDM39_09710 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09715 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_09725 PF01842 ACT domain IDM39_09725 PF00742 Homoserine dehydrogenase IDM39_09725 PF03447 Homoserine dehydrogenase, NAD binding domain IDM39_09730 PF01053 Cys/Met metabolism PLP-dependent enzyme IDM39_09735 PF04204 Homoserine O-succinyltransferase IDM39_09745 PF02608 ABC transporter substrate-binding protein PnrA-like IDM39_09750 PF00453 Ribosomal protein L20 IDM39_09750 PF12949 HeH/LEM domain IDM39_09755 PF01632 Ribosomal protein L35 IDM39_09760 PF00707 Translation initiation factor IF-3, C-terminal domain IDM39_09760 PF05198 Translation initiation factor IF-3, N-terminal domain IDM39_09765 PF01029 NusB family IDM39_09770 PF03780 Asp23 family, cell envelope-related function IDM39_09775 PF01132 Elongation factor P (EF-P) OB domain IDM39_09775 PF08207 Elongation factor P (EF-P) KOW-like domain IDM39_09775 PF09285 Elongation factor P, C-terminal IDM39_09780 PF00342 Phosphoglucose isomerase IDM39_09785 PF01263 Aldose 1-epimerase IDM39_09790 PF00480 ROK family IDM39_09800 PF06800 Sugar transport protein IDM39_09805 PF00672 HAMP domain IDM39_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_09805 PF00512 His Kinase A (phospho-acceptor) domain IDM39_09810 PF00486 Transcriptional regulatory protein, C terminal IDM39_09810 PF00072 Response regulator receiver domain IDM39_09815 PF17841 BID domain of Bartonella effector protein (Bep) IDM39_09815 PF03389 MobA/MobL family IDM39_09815 PF01443 Viral (Superfamily 1) RNA helicase IDM39_09820 PF07969 Amidohydrolase family IDM39_09825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IDM39_09825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IDM39_09835 PF01131 DNA topoisomerase IDM39_09835 PF01751 Toprim domain IDM39_09835 PF13342 C-terminal repeat of topoisomerase IDM39_09850 PF00924 Mechanosensitive ion channel IDM39_09860 PF00005 ABC transporter IDM39_09865 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_09900 PF00478 IMP dehydrogenase / GMP reductase domain IDM39_09910 PF00106 short chain dehydrogenase IDM39_09935 PF03051 Peptidase C1-like family IDM39_09965 PF01156 Inosine-uridine preferring nucleoside hydrolase IDM39_09980 PF00293 NUDIX domain IDM39_10010 PF02086 D12 class N6 adenine-specific DNA methyltransferase IDM39_10015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IDM39_10020 PF00294 pfkB family carbohydrate kinase IDM39_10020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IDM39_10030 PF05025 RbsD / FucU transport protein family IDM39_10035 PF00356 Bacterial regulatory proteins, lacI family IDM39_10045 PF01380 SIS domain IDM39_10050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IDM39_10055 PF00294 pfkB family carbohydrate kinase IDM39_10070 PF00356 Bacterial regulatory proteins, lacI family IDM39_10085 PF07690 Major Facilitator Superfamily IDM39_10095 PF00501 AMP-binding enzyme IDM39_10095 PF13193 AMP-binding enzyme C-terminal domain IDM39_10105 PF00005 ABC transporter IDM39_10110 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_10115 PF00809 Pterin binding enzyme IDM39_10120 PF02875 Mur ligase family, glutamate ligase domain IDM39_10120 PF08245 Mur ligase middle domain IDM39_10125 PF01227 GTP cyclohydrolase I IDM39_10130 PF01227 GTP cyclohydrolase I IDM39_10130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IDM39_10160 PF07676 WD40-like Beta Propeller Repeat IDM39_10160 PF00326 Prolyl oligopeptidase family IDM39_10165 PF03180 NLPA lipoprotein IDM39_10180 PF13419 Haloacid dehalogenase-like hydrolase IDM39_10185 PF03632 Glycosyl hydrolase family 65 central catalytic domain IDM39_10185 PF03636 Glycosyl hydrolase family 65, N-terminal domain IDM39_10185 PF03633 Glycosyl hydrolase family 65, C-terminal domain IDM39_10195 PF00356 Bacterial regulatory proteins, lacI family IDM39_10225 PF02687 FtsX-like permease family IDM39_10230 PF00005 ABC transporter IDM39_10235 PF06993 Protein of unknown function (DUF1304) IDM39_10260 PF00696 Amino acid kinase family IDM39_10265 PF13520 Amino acid permease IDM39_10270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IDM39_10270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IDM39_10280 PF12072 Domain of unknown function (DUF3552) IDM39_10280 PF00013 KH domain IDM39_10280 PF01966 HD domain IDM39_10350 PF00440 Bacterial regulatory proteins, tetR family IDM39_10370 PF00367 phosphotransferase system, EIIB IDM39_10370 PF02378 Phosphotransferase system, EIIC IDM39_10370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IDM39_10375 PF03123 CAT RNA binding domain IDM39_10375 PF00874 PRD domain IDM39_10380 PF00232 Glycosyl hydrolase family 1 IDM39_10385 PF00480 ROK family IDM39_10410 PF00575 S1 RNA binding domain IDM39_10410 PF09371 Tex-like protein N-terminal domain IDM39_10410 PF16921 Tex protein YqgF-like domain IDM39_10410 PF17674 HHH domain IDM39_10420 PF01053 Cys/Met metabolism PLP-dependent enzyme IDM39_10425 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IDM39_10425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IDM39_10435 PF00271 Helicase conserved C-terminal domain IDM39_10435 PF04851 Type III restriction enzyme, res subunit IDM39_10440 PF12849 PBP superfamily domain IDM39_10515 PF14579 Helix-hairpin-helix motif IDM39_10515 PF00929 Exonuclease IDM39_10515 PF02811 PHP domain IDM39_10515 PF07733 Bacterial DNA polymerase III alpha NTPase domain IDM39_10515 PF11490 DNA polymerase III polC-type N-terminus II IDM39_10515 PF14480 DNA polymerase III polC-type N-terminus I IDM39_10515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IDM39_10520 PF03129 Anticodon binding domain IDM39_10520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IDM39_10520 PF04073 Aminoacyl-tRNA editing domain IDM39_10525 PF17820 PDZ domain IDM39_10525 PF02163 Peptidase family M50 IDM39_10535 PF01255 Putative undecaprenyl diphosphate synthase IDM39_10545 PF04138 GtrA-like protein IDM39_10570 PF04474 Protein of unknown function (DUF554) IDM39_10585 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_10590 PF00571 CBS domain IDM39_10590 PF00005 ABC transporter IDM39_10595 PF01641 SelR domain IDM39_10605 PF00885 6,7-dimethyl-8-ribityllumazine synthase IDM39_10610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IDM39_10610 PF00925 GTP cyclohydrolase II IDM39_10615 PF00677 Lumazine binding domain IDM39_10620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IDM39_10620 PF01872 RibD C-terminal domain IDM39_10625 PF00893 Small Multidrug Resistance protein IDM39_10630 PF00893 Small Multidrug Resistance protein IDM39_10640 PF00265 Thymidine kinase IDM39_10655 PF02645 Uncharacterised protein, DegV family COG1307 IDM39_10660 PF00248 Aldo/keto reductase family IDM39_10665 PF17760 UvrA interaction domain IDM39_10665 PF00005 ABC transporter IDM39_10665 PF17755 UvrA DNA-binding domain IDM39_10670 PF07690 Major Facilitator Superfamily IDM39_10685 PF01979 Amidohydrolase family IDM39_10690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_10695 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_10695 PF00107 Zinc-binding dehydrogenase IDM39_10710 PF00665 Integrase core domain IDM39_10710 PF13936 Helix-turn-helix domain IDM39_10725 PF00583 Acetyltransferase (GNAT) family IDM39_10750 PF00156 Phosphoribosyl transferase domain IDM39_10755 PF00709 Adenylosuccinate synthetase IDM39_10760 PF00690 Cation transporter/ATPase, N-terminus IDM39_10760 PF00689 Cation transporting ATPase, C-terminus IDM39_10765 PF00860 Permease family IDM39_10775 PF02581 Thiamine monophosphate synthase IDM39_10780 PF06160 Septation ring formation regulator, EzrA IDM39_10790 PF07690 Major Facilitator Superfamily IDM39_10795 PF01479 S4 domain IDM39_10795 PF00163 Ribosomal protein S4/S9 N-terminal domain IDM39_10805 PF00392 Bacterial regulatory proteins, gntR family IDM39_10805 PF07702 UTRA domain IDM39_10810 PF01979 Amidohydrolase family IDM39_10815 PF02687 FtsX-like permease family IDM39_10815 PF12704 MacB-like periplasmic core domain IDM39_10815 PF00005 ABC transporter IDM39_10830 PF02805 Metal binding domain of Ada IDM39_10830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IDM39_10830 PF12833 Helix-turn-helix domain IDM39_10830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IDM39_10860 PF03807 NADP oxidoreductase coenzyme F420-dependent IDM39_10860 PF14748 Pyrroline-5-carboxylate reductase dimerisation IDM39_10865 PF01098 Cell cycle protein IDM39_10880 PF01225 Mur ligase family, catalytic domain IDM39_10880 PF02875 Mur ligase family, glutamate ligase domain IDM39_10880 PF08245 Mur ligase middle domain IDM39_10885 PF02653 Branched-chain amino acid transport system / permease component IDM39_10890 PF02653 Branched-chain amino acid transport system / permease component IDM39_10895 PF00005 ABC transporter IDM39_10900 PF02608 ABC transporter substrate-binding protein PnrA-like IDM39_10915 PF01022 Bacterial regulatory protein, arsR family IDM39_10920 PF01594 AI-2E family transporter IDM39_10925 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IDM39_10925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IDM39_10930 PF01063 Amino-transferase class IV IDM39_10935 PF01906 Putative heavy-metal-binding IDM39_10945 PF00255 Glutathione peroxidase IDM39_10955 PF00300 Histidine phosphatase superfamily (branch 1) IDM39_10965 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_10980 PF02608 ABC transporter substrate-binding protein PnrA-like IDM39_10985 PF02608 ABC transporter substrate-binding protein PnrA-like IDM39_10990 PF08544 GHMP kinases C terminal IDM39_10990 PF00288 GHMP kinases N terminal domain IDM39_10995 PF04304 Protein of unknown function (DUF454) IDM39_11030 PF07690 Major Facilitator Superfamily IDM39_11035 PF00772 DnaB-like helicase N terminal domain IDM39_11035 PF03796 DnaB-like helicase C terminal domain IDM39_11040 PF03948 Ribosomal protein L9, C-terminal domain IDM39_11040 PF01281 Ribosomal protein L9, N-terminal domain IDM39_11045 PF01368 DHH family IDM39_11045 PF02272 DHHA1 domain IDM39_11050 PF00005 ABC transporter IDM39_11050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_11055 PF00005 ABC transporter IDM39_11060 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11060 PF12911 N-terminal TM domain of oligopeptide transport permease C IDM39_11065 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_11075 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11080 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11085 PF00497 Bacterial extracellular solute-binding proteins, family 3 IDM39_11090 PF00005 ABC transporter IDM39_11105 PF00625 Guanylate kinase IDM39_11110 PF02632 BioY family IDM39_11115 PF03309 Type III pantothenate kinase IDM39_11115 PF03099 Biotin/lipoate A/B protein ligase family IDM39_11115 PF02237 Biotin protein ligase C terminal domain IDM39_11135 PF01546 Peptidase family M20/M25/M40 IDM39_11145 PF01256 Carbohydrate kinase IDM39_11155 PF00579 tRNA synthetases class I (W and Y) IDM39_11160 PF13538 UvrD-like helicase C-terminal domain IDM39_11180 PF04914 DltD protein IDM39_11185 PF00550 Phosphopantetheine attachment site IDM39_11190 PF03062 MBOAT, membrane-bound O-acyltransferase family IDM39_11195 PF00501 AMP-binding enzyme IDM39_11195 PF13193 AMP-binding enzyme C-terminal domain IDM39_11205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_11205 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_11210 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IDM39_11215 PF01168 Alanine racemase, N-terminal domain IDM39_11215 PF00842 Alanine racemase, C-terminal domain IDM39_11220 PF00271 Helicase conserved C-terminal domain IDM39_11220 PF00270 DEAD/DEAH box helicase IDM39_11225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IDM39_11230 PF06418 CTP synthase N-terminus IDM39_11230 PF00117 Glutamine amidotransferase class-I IDM39_11245 PF05066 HB1, ASXL, restriction endonuclease HTH domain IDM39_11255 PF01966 HD domain IDM39_11265 PF13180 PDZ domain IDM39_11270 PF00753 Metallo-beta-lactamase superfamily IDM39_11285 PF00672 HAMP domain IDM39_11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_11285 PF00512 His Kinase A (phospho-acceptor) domain IDM39_11285 PF13426 PAS domain IDM39_11290 PF00072 Response regulator receiver domain IDM39_11290 PF00486 Transcriptional regulatory protein, C terminal IDM39_11325 PF01084 Ribosomal protein S18 IDM39_11330 PF00436 Single-strand binding protein family IDM39_11335 PF01250 Ribosomal protein S6 IDM39_11350 PF01156 Inosine-uridine preferring nucleoside hydrolase IDM39_11355 PF14572 Phosphoribosyl synthetase-associated domain IDM39_11355 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IDM39_11360 PF00132 Bacterial transferase hexapeptide (six repeats) IDM39_11360 PF12804 MobA-like NTP transferase domain IDM39_11365 PF00156 Phosphoribosyl transferase domain IDM39_11365 PF09182 Bacterial purine repressor, N-terminal IDM39_11370 PF00293 NUDIX domain IDM39_11375 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IDM39_11375 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IDM39_11380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IDM39_11380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IDM39_11385 PF07690 Major Facilitator Superfamily IDM39_11390 PF00107 Zinc-binding dehydrogenase IDM39_11390 PF08240 Alcohol dehydrogenase GroES-like domain IDM39_11395 PF12705 PD-(D/E)XK nuclease superfamily IDM39_11395 PF00580 UvrD/REP helicase N-terminal domain IDM39_11395 PF13361 UvrD-like helicase C-terminal domain IDM39_11400 PF12705 PD-(D/E)XK nuclease superfamily IDM39_11420 PF01546 Peptidase family M20/M25/M40 IDM39_11425 PF00196 Bacterial regulatory proteins, luxR family IDM39_11425 PF00072 Response regulator receiver domain IDM39_11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_11430 PF07730 Histidine kinase IDM39_11440 PF03176 MMPL family IDM39_11445 PF13520 Amino acid permease IDM39_11450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IDM39_11450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IDM39_11460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IDM39_11465 PF01053 Cys/Met metabolism PLP-dependent enzyme IDM39_11490 PF01943 Polysaccharide biosynthesis protein IDM39_11490 PF14667 Polysaccharide biosynthesis C-terminal domain IDM39_11500 PF13439 Glycosyltransferase Family 4 IDM39_11500 PF00534 Glycosyl transferases group 1 IDM39_11505 PF13603 Leucyl-tRNA synthetase, Domain 2 IDM39_11505 PF09334 tRNA synthetases class I (M) IDM39_11505 PF08264 Anticodon-binding domain of tRNA IDM39_11505 PF00133 tRNA synthetases class I (I, L, M and V) IDM39_11510 PF01569 PAP2 superfamily IDM39_11520 PF05958 tRNA (Uracil-5-)-methyltransferase IDM39_11520 PF01938 TRAM domain IDM39_11535 PF03358 NADPH-dependent FMN reductase IDM39_11545 PF00232 Glycosyl hydrolase family 1 IDM39_11575 PF02773 S-adenosylmethionine synthetase, C-terminal domain IDM39_11575 PF02772 S-adenosylmethionine synthetase, central domain IDM39_11575 PF00438 S-adenosylmethionine synthetase, N-terminal domain IDM39_11590 PF00557 Metallopeptidase family M24 IDM39_11600 PF03816 Cell envelope-related transcriptional attenuator domain IDM39_11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IDM39_11610 PF00512 His Kinase A (phospho-acceptor) domain IDM39_11615 PF00486 Transcriptional regulatory protein, C terminal IDM39_11615 PF00072 Response regulator receiver domain IDM39_11620 PF01625 Peptide methionine sulfoxide reductase IDM39_11635 PF17853 GGDEF-like domain IDM39_11635 PF12833 Helix-turn-helix domain IDM39_11640 PF13802 Galactose mutarotase-like IDM39_11640 PF01055 Glycosyl hydrolases family 31 IDM39_11655 PF11838 ERAP1-like C-terminal domain IDM39_11655 PF01433 Peptidase family M1 domain IDM39_11660 PF00324 Amino acid permease IDM39_11665 PF02574 Homocysteine S-methyltransferase IDM39_11670 PF00497 Bacterial extracellular solute-binding proteins, family 3 IDM39_11675 PF17871 AAA lid domain IDM39_11675 PF10431 C-terminal, D2-small domain, of ClpB protein IDM39_11675 PF07724 AAA domain (Cdc48 subfamily) IDM39_11675 PF00004 ATPase family associated with various cellular activities (AAA) IDM39_11690 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11695 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_11700 PF00005 ABC transporter IDM39_11700 PF17912 MalK OB fold domain IDM39_11710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_11710 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_11725 PF07859 alpha/beta hydrolase fold IDM39_11755 PF00977 Histidine biosynthesis protein IDM39_11760 PF00977 Histidine biosynthesis protein IDM39_11765 PF00117 Glutamine amidotransferase class-I IDM39_11770 PF00475 Imidazoleglycerol-phosphate dehydratase IDM39_11775 PF00815 Histidinol dehydrogenase IDM39_11780 PF01634 ATP phosphoribosyltransferase IDM39_11785 PF02811 PHP domain IDM39_11895 PF00534 Glycosyl transferases group 1 IDM39_11920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IDM39_11920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IDM39_11925 PF00106 short chain dehydrogenase IDM39_11935 PF02652 L-lactate permease IDM39_11940 PF00248 Aldo/keto reductase family IDM39_11945 PF00156 Phosphoribosyl transferase domain IDM39_11950 PF00860 Permease family IDM39_11960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IDM39_11960 PF07992 Pyridine nucleotide-disulphide oxidoreductase IDM39_11965 PF13185 GAF domain IDM39_11980 PF00664 ABC transporter transmembrane region IDM39_11980 PF00005 ABC transporter IDM39_11985 PF00005 ABC transporter IDM39_11985 PF00664 ABC transporter transmembrane region IDM39_11990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IDM39_11995 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_12000 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_12005 PF00005 ABC transporter IDM39_12005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_12010 PF00005 ABC transporter IDM39_12010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IDM39_12015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IDM39_12015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IDM39_12020 PF08544 GHMP kinases C terminal IDM39_12020 PF00288 GHMP kinases N terminal domain IDM39_12020 PF10509 Galactokinase galactose-binding signature IDM39_12025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IDM39_12040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IDM39_12040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IDM39_12045 PF00155 Aminotransferase class I and II IDM39_12055 PF02378 Phosphotransferase system, EIIC IDM39_12060 PF13276 HTH-like domain IDM39_12060 PF00665 Integrase core domain IDM39_12060 PF13333 Integrase core domain IDM39_12070 PF00232 Glycosyl hydrolase family 1 IDM39_12075 PF00232 Glycosyl hydrolase family 1 IDM39_12080 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IDM39_12085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IDM39_12090 PF01063 Amino-transferase class IV IDM39_12100 PF00535 Glycosyl transferase family 2 IDM39_12115 PF00579 tRNA synthetases class I (W and Y) IDM39_12115 PF01479 S4 domain IDM39_12175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IDM39_12175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IDM39_12180 PF01418 Helix-turn-helix domain, rpiR family IDM39_12180 PF01380 SIS domain IDM39_12190 PF00248 Aldo/keto reductase family IDM39_12195 PF04226 Transglycosylase associated protein IDM39_12260 PF01336 OB-fold nucleic acid binding domain IDM39_12260 PF00152 tRNA synthetases class II (D, K and N) IDM39_12265 PF01430 Hsp33 protein IDM39_12270 PF00004 ATPase family associated with various cellular activities (AAA) IDM39_12270 PF06480 FtsH Extracellular IDM39_12270 PF01434 Peptidase family M41 IDM39_12270 PF17862 AAA+ lid domain IDM39_12275 PF01171 PP-loop family IDM39_12275 PF00156 Phosphoribosyl transferase domain IDM39_12275 PF11734 TilS substrate C-terminal domain IDM39_12280 PF01171 PP-loop family IDM39_12290 PF01479 S4 domain IDM39_12295 PF01943 Polysaccharide biosynthesis protein IDM39_12295 PF14667 Polysaccharide biosynthesis C-terminal domain IDM39_12300 PF17757 UvrB interaction domain IDM39_12300 PF03461 TRCF domain IDM39_12300 PF02559 CarD-like/TRCF domain IDM39_12300 PF00270 DEAD/DEAH box helicase IDM39_12300 PF00271 Helicase conserved C-terminal domain IDM39_12305 PF01195 Peptidyl-tRNA hydrolase IDM39_12310 PF00128 Alpha amylase, catalytic domain IDM39_12310 PF02903 Alpha amylase, N-terminal ig-like domain IDM39_12315 PF00343 Carbohydrate phosphorylase IDM39_12320 PF08323 Starch synthase catalytic domain IDM39_12320 PF00534 Glycosyl transferases group 1 IDM39_12325 PF00483 Nucleotidyl transferase IDM39_12330 PF00132 Bacterial transferase hexapeptide (six repeats) IDM39_12330 PF00483 Nucleotidyl transferase IDM39_12350 PF00440 Bacterial regulatory proteins, tetR family IDM39_12365 PF02378 Phosphotransferase system, EIIC IDM39_12370 PF07690 Major Facilitator Superfamily IDM39_12385 PF00248 Aldo/keto reductase family IDM39_12390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IDM39_12390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IDM39_12400 PF00480 ROK family IDM39_12435 PF03352 Methyladenine glycosylase IDM39_12440 PF02673 Bacitracin resistance protein BacA IDM39_12455 PF03551 Transcriptional regulator PadR-like family IDM39_12460 PF04024 PspC domain IDM39_12465 PF07662 Na+ dependent nucleoside transporter C-terminus IDM39_12465 PF01773 Na+ dependent nucleoside transporter N-terminus IDM39_12470 PF02872 5'-nucleotidase, C-terminal domain IDM39_12470 PF00149 Calcineurin-like phosphoesterase IDM39_12475 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_12480 PF00528 Binding-protein-dependent transport system inner membrane component IDM39_12485 PF00005 ABC transporter IDM39_12495 PF00232 Glycosyl hydrolase family 1 IDM39_12500 PF00367 phosphotransferase system, EIIB IDM39_12500 PF02378 Phosphotransferase system, EIIC IDM39_12505 PF03816 Cell envelope-related transcriptional attenuator domain IDM39_12510 PF00303 Thymidylate synthase IDM39_12515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IDM39_12520 PF06257 Biofilm formation stimulator VEG IDM39_12525 PF00571 CBS domain IDM39_12525 PF03471 Transporter associated domain IDM39_12525 PF01595 Cyclin M transmembrane N-terminal domain IDM39_12530 PF00571 CBS domain IDM39_12530 PF03471 Transporter associated domain IDM39_12530 PF01595 Cyclin M transmembrane N-terminal domain IDM39_12535 PF00398 Ribosomal RNA adenine dimethylase IDM39_12540 PF13331 Domain of unknown function (DUF4093) IDM39_12545 PF01026 TatD related DNase IDM39_12550 PF00999 Sodium/hydrogen exchanger family