locus-tag class description K1728_00005 PF00308 Bacterial dnaA protein K1728_00005 PF08299 Bacterial dnaA protein helix-turn-helix K1728_00005 PF11638 DnaA N-terminal domain K1728_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain K1728_00010 PF02767 DNA polymerase III beta subunit, central domain K1728_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain K1728_00020 PF02463 RecF/RecN/SMC N terminal domain K1728_00025 PF00204 DNA gyrase B K1728_00025 PF00986 DNA gyrase B subunit, carboxyl terminus K1728_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_00025 PF01751 Toprim domain K1728_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller K1728_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A K1728_00040 PF13673 Acetyltransferase (GNAT) domain K1728_00045 PF00884 Sulfatase K1728_00050 PF02607 B12 binding domain K1728_00050 PF13411 MerR HTH family regulatory protein K1728_00055 PF00368 Hydroxymethylglutaryl-coenzyme A reductase K1728_00065 PF02146 Sir2 family K1728_00095 PF08264 Anticodon-binding domain of tRNA K1728_00095 PF09334 tRNA synthetases class I (M) K1728_00095 PF01588 Putative tRNA binding domain K1728_00100 PF00999 Sodium/hydrogen exchanger family K1728_00105 PF01026 TatD related DNase K1728_00110 PF13331 Domain of unknown function (DUF4093) K1728_00115 PF00398 Ribosomal RNA adenine dimethylase K1728_00120 PF00571 CBS domain K1728_00120 PF01595 Cyclin M transmembrane N-terminal domain K1728_00120 PF03471 Transporter associated domain K1728_00125 PF00571 CBS domain K1728_00125 PF01595 Cyclin M transmembrane N-terminal domain K1728_00125 PF03471 Transporter associated domain K1728_00130 PF06257 Biofilm formation stimulator VEG K1728_00135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K1728_00140 PF00303 Thymidylate synthase K1728_00145 PF03816 Cell envelope-related transcriptional attenuator domain K1728_00150 PF07662 Na+ dependent nucleoside transporter C-terminus K1728_00150 PF01773 Na+ dependent nucleoside transporter N-terminus K1728_00155 PF04024 PspC domain K1728_00160 PF03551 Transcriptional regulator PadR-like family K1728_00175 PF02673 Bacitracin resistance protein BacA K1728_00200 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain K1728_00200 PF04616 Glycosyl hydrolases family 43 K1728_00210 PF00480 ROK family K1728_00220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K1728_00220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K1728_00230 PF07690 Major Facilitator Superfamily K1728_00235 PF02378 Phosphotransferase system, EIIC K1728_00250 PF00440 Bacterial regulatory proteins, tetR family K1728_00260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K1728_00260 PF02806 Alpha amylase, C-terminal all-beta domain K1728_00260 PF00128 Alpha amylase, catalytic domain K1728_00265 PF00483 Nucleotidyl transferase K1728_00265 PF00132 Bacterial transferase hexapeptide (six repeats) K1728_00270 PF00483 Nucleotidyl transferase K1728_00275 PF08323 Starch synthase catalytic domain K1728_00275 PF00534 Glycosyl transferases group 1 K1728_00280 PF00343 Carbohydrate phosphorylase K1728_00285 PF02903 Alpha amylase, N-terminal ig-like domain K1728_00285 PF00128 Alpha amylase, catalytic domain K1728_00295 PF01195 Peptidyl-tRNA hydrolase K1728_00300 PF03461 TRCF domain K1728_00300 PF02559 CarD-like/TRCF domain K1728_00300 PF00271 Helicase conserved C-terminal domain K1728_00300 PF17757 UvrB interaction domain K1728_00300 PF00270 DEAD/DEAH box helicase K1728_00305 PF01943 Polysaccharide biosynthesis protein K1728_00305 PF14667 Polysaccharide biosynthesis C-terminal domain K1728_00310 PF01479 S4 domain K1728_00320 PF11734 TilS substrate C-terminal domain K1728_00320 PF01171 PP-loop family K1728_00325 PF01171 PP-loop family K1728_00325 PF11734 TilS substrate C-terminal domain K1728_00325 PF00156 Phosphoribosyl transferase domain K1728_00330 PF06480 FtsH Extracellular K1728_00330 PF17862 AAA+ lid domain K1728_00330 PF00004 ATPase family associated with various cellular activities (AAA) K1728_00330 PF01434 Peptidase family M41 K1728_00335 PF01430 Hsp33 protein K1728_00340 PF00152 tRNA synthetases class II (D, K and N) K1728_00340 PF01336 OB-fold nucleic acid binding domain K1728_00405 PF04226 Transglycosylase associated protein K1728_00410 PF00248 Aldo/keto reductase family K1728_00420 PF01380 SIS domain K1728_00420 PF01418 Helix-turn-helix domain, rpiR family K1728_00425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K1728_00425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K1728_00445 PF13460 NAD(P)H-binding K1728_00455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K1728_00455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K1728_00460 PF13520 Amino acid permease K1728_00465 PF00696 Amino acid kinase family K1728_00485 PF01479 S4 domain K1728_00485 PF00579 tRNA synthetases class I (W and Y) K1728_00500 PF00535 Glycosyl transferase family 2 K1728_00510 PF13185 GAF domain K1728_00515 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_00515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_00525 PF00860 Permease family K1728_00530 PF00156 Phosphoribosyl transferase domain K1728_00550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K1728_00550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K1728_00555 PF00534 Glycosyl transferases group 1 K1728_00795 PF13614 AAA domain K1728_00805 PF18840 Large polyvalent protein associated domain 25 K1728_00815 PF17871 AAA lid domain K1728_00815 PF02861 Clp amino terminal domain, pathogenicity island component K1728_00815 PF00004 ATPase family associated with various cellular activities (AAA) K1728_00815 PF07724 AAA domain (Cdc48 subfamily) K1728_00815 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_00855 PF01551 Peptidase family M23 K1728_00855 PF10145 Phage-related minor tail protein K1728_00855 PF01464 Transglycosylase SLT domain K1728_00900 PF06696 Streptococcal surface antigen repeat K1728_00900 PF08363 Glucan-binding protein C K1728_00900 PF18652 Adhesin P1 N-terminal domain K1728_00900 PF16364 Cell surface antigen C-terminus K1728_00900 PF17998 Cell surface antigen I/II C2 terminal domain K1728_00905 PF01548 Transposase K1728_00905 PF02371 Transposase IS116/IS110/IS902 family K1728_00910 PF01566 Natural resistance-associated macrophage protein K1728_00930 PF00072 Response regulator receiver domain K1728_00930 PF00486 Transcriptional regulatory protein, C terminal K1728_00935 PF00512 His Kinase A (phospho-acceptor) domain K1728_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_00945 PF03816 Cell envelope-related transcriptional attenuator domain K1728_00950 PF00265 Thymidine kinase K1728_00955 PF00107 Zinc-binding dehydrogenase K1728_00955 PF08240 Alcohol dehydrogenase GroES-like domain K1728_00975 PF00005 ABC transporter K1728_00980 PF00528 Binding-protein-dependent transport system inner membrane component K1728_00985 PF00528 Binding-protein-dependent transport system inner membrane component K1728_00990 PF02872 5'-nucleotidase, C-terminal domain K1728_00990 PF00149 Calcineurin-like phosphoesterase K1728_00995 PF01625 Peptide methionine sulfoxide reductase K1728_01005 PF00557 Metallopeptidase family M24 K1728_01015 PF00438 S-adenosylmethionine synthetase, N-terminal domain K1728_01015 PF02772 S-adenosylmethionine synthetase, central domain K1728_01015 PF02773 S-adenosylmethionine synthetase, C-terminal domain K1728_01035 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01040 PF04138 GtrA-like protein K1728_01045 PF00664 ABC transporter transmembrane region K1728_01045 PF00005 ABC transporter K1728_01050 PF01641 SelR domain K1728_01065 PF01938 TRAM domain K1728_01065 PF05958 tRNA (Uracil-5-)-methyltransferase K1728_01075 PF01569 PAP2 superfamily K1728_01080 PF08264 Anticodon-binding domain of tRNA K1728_01080 PF00133 tRNA synthetases class I (I, L, M and V) K1728_01080 PF13603 Leucyl-tRNA synthetase, Domain 2 K1728_01080 PF09334 tRNA synthetases class I (M) K1728_01085 PF00534 Glycosyl transferases group 1 K1728_01085 PF13439 Glycosyltransferase Family 4 K1728_01095 PF01943 Polysaccharide biosynthesis protein K1728_01095 PF14667 Polysaccharide biosynthesis C-terminal domain K1728_01110 PF01053 Cys/Met metabolism PLP-dependent enzyme K1728_01115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K1728_01125 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K1728_01125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K1728_01130 PF13520 Amino acid permease K1728_01135 PF01546 Peptidase family M20/M25/M40 K1728_01140 PF12705 PD-(D/E)XK nuclease superfamily K1728_01145 PF13361 UvrD-like helicase C-terminal domain K1728_01145 PF00580 UvrD/REP helicase N-terminal domain K1728_01145 PF12705 PD-(D/E)XK nuclease superfamily K1728_01150 PF00107 Zinc-binding dehydrogenase K1728_01150 PF08240 Alcohol dehydrogenase GroES-like domain K1728_01155 PF07690 Major Facilitator Superfamily K1728_01160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K1728_01160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K1728_01165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K1728_01165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K1728_01170 PF00293 NUDIX domain K1728_01175 PF09182 Bacterial purine repressor, N-terminal K1728_01175 PF00156 Phosphoribosyl transferase domain K1728_01180 PF00132 Bacterial transferase hexapeptide (six repeats) K1728_01180 PF12804 MobA-like NTP transferase domain K1728_01185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K1728_01185 PF14572 Phosphoribosyl synthetase-associated domain K1728_01190 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_01195 PF01250 Ribosomal protein S6 K1728_01200 PF00436 Single-strand binding protein family K1728_01205 PF01084 Ribosomal protein S18 K1728_01235 PF00486 Transcriptional regulatory protein, C terminal K1728_01235 PF00072 Response regulator receiver domain K1728_01240 PF00672 HAMP domain K1728_01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_01240 PF00512 His Kinase A (phospho-acceptor) domain K1728_01240 PF00989 PAS fold K1728_01255 PF00753 Metallo-beta-lactamase superfamily K1728_01260 PF13180 PDZ domain K1728_01270 PF01966 HD domain K1728_01280 PF05066 HB1, ASXL, restriction endonuclease HTH domain K1728_01300 PF00117 Glutamine amidotransferase class-I K1728_01300 PF06418 CTP synthase N-terminus K1728_01305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K1728_01310 PF00270 DEAD/DEAH box helicase K1728_01310 PF00271 Helicase conserved C-terminal domain K1728_01315 PF00842 Alanine racemase, C-terminal domain K1728_01315 PF01168 Alanine racemase, N-terminal domain K1728_01320 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system K1728_01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_01325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_01330 PF13538 UvrD-like helicase C-terminal domain K1728_01335 PF00579 tRNA synthetases class I (W and Y) K1728_01345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K1728_01345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K1728_01350 PF01256 Carbohydrate kinase K1728_01360 PF01546 Peptidase family M20/M25/M40 K1728_01380 PF03099 Biotin/lipoate A/B protein ligase family K1728_01380 PF08279 HTH domain K1728_01380 PF02237 Biotin protein ligase C terminal domain K1728_01385 PF02632 BioY family K1728_01390 PF00625 Guanylate kinase K1728_01405 PF00005 ABC transporter K1728_01410 PF00497 Bacterial extracellular solute-binding proteins, family 3 K1728_01415 PF00528 Binding-protein-dependent transport system inner membrane component K1728_01420 PF00528 Binding-protein-dependent transport system inner membrane component K1728_01430 PF07690 Major Facilitator Superfamily K1728_01440 PF00356 Bacterial regulatory proteins, lacI family K1728_01445 PF00294 pfkB family carbohydrate kinase K1728_01445 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K1728_01450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K1728_01475 PF01773 Na+ dependent nucleoside transporter N-terminus K1728_01475 PF07662 Na+ dependent nucleoside transporter C-terminus K1728_01480 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_01485 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_01490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K1728_01495 PF00528 Binding-protein-dependent transport system inner membrane component K1728_01500 PF00528 Binding-protein-dependent transport system inner membrane component K1728_01500 PF12911 N-terminal TM domain of oligopeptide transport permease C K1728_01505 PF00005 ABC transporter K1728_01505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K1728_01510 PF00005 ABC transporter K1728_01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K1728_01515 PF02272 DHHA1 domain K1728_01515 PF01368 DHH family K1728_01520 PF03948 Ribosomal protein L9, C-terminal domain K1728_01520 PF01281 Ribosomal protein L9, N-terminal domain K1728_01525 PF03796 DnaB-like helicase C terminal domain K1728_01525 PF00772 DnaB-like helicase N terminal domain K1728_01530 PF07690 Major Facilitator Superfamily K1728_01540 PF01546 Peptidase family M20/M25/M40 K1728_01540 PF07687 Peptidase dimerisation domain K1728_01565 PF04304 Protein of unknown function (DUF454) K1728_01570 PF00288 GHMP kinases N terminal domain K1728_01570 PF08544 GHMP kinases C terminal K1728_01575 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01580 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_01600 PF00300 Histidine phosphatase superfamily (branch 1) K1728_01605 PF01906 Putative heavy-metal-binding K1728_01610 PF01063 Amino-transferase class IV K1728_01615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K1728_01615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K1728_01620 PF01594 AI-2E family transporter K1728_01625 PF01022 Bacterial regulatory protein, arsR family K1728_01635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_01640 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01645 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01650 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_01655 PF00005 ABC transporter K1728_01660 PF02653 Branched-chain amino acid transport system / permease component K1728_01665 PF02653 Branched-chain amino acid transport system / permease component K1728_01675 PF01225 Mur ligase family, catalytic domain K1728_01675 PF08245 Mur ligase middle domain K1728_01675 PF02875 Mur ligase family, glutamate ligase domain K1728_01690 PF01098 Cell cycle protein K1728_01695 PF03807 NADP oxidoreductase coenzyme F420-dependent K1728_01695 PF14748 Pyrroline-5-carboxylate reductase dimerisation K1728_01715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K1728_01715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K1728_01730 PF00005 ABC transporter K1728_01730 PF02687 FtsX-like permease family K1728_01730 PF12704 MacB-like periplasmic core domain K1728_01735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K1728_01735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K1728_01740 PF01979 Amidohydrolase family K1728_01745 PF07702 UTRA domain K1728_01745 PF00392 Bacterial regulatory proteins, gntR family K1728_01750 PF02920 DNA binding domain of tn916 integrase K1728_01750 PF00589 Phage integrase family K1728_01865 PF00436 Single-strand binding protein family K1728_01890 PF04608 Phosphatidylglycerophosphatase A K1728_01955 PF04466 Phage terminase large subunit K1728_01955 PF17288 Terminase RNAseH like domain K1728_02055 PF01510 N-acetylmuramoyl-L-alanine amidase K1728_02055 PF01473 Putative cell wall binding repeat K1728_02070 PF01479 S4 domain K1728_02070 PF00163 Ribosomal protein S4/S9 N-terminal domain K1728_02075 PF01757 Acyltransferase family K1728_02085 PF06160 Septation ring formation regulator, EzrA K1728_02095 PF02581 Thiamine monophosphate synthase K1728_02100 PF00860 Permease family K1728_02105 PF00690 Cation transporter/ATPase, N-terminus K1728_02105 PF00689 Cation transporting ATPase, C-terminus K1728_02110 PF00709 Adenylosuccinate synthetase K1728_02115 PF00156 Phosphoribosyl transferase domain K1728_02120 PF08240 Alcohol dehydrogenase GroES-like domain K1728_02120 PF00107 Zinc-binding dehydrogenase K1728_02130 PF02645 Uncharacterised protein, DegV family COG1307 K1728_02150 PF07690 Major Facilitator Superfamily K1728_02160 PF00248 Aldo/keto reductase family K1728_02210 PF01255 Putative undecaprenyl diphosphate synthase K1728_02220 PF02163 Peptidase family M50 K1728_02220 PF17820 PDZ domain K1728_02225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K1728_02225 PF04073 Aminoacyl-tRNA editing domain K1728_02225 PF03129 Anticodon binding domain K1728_02230 PF14480 DNA polymerase III polC-type N-terminus I K1728_02230 PF11490 DNA polymerase III polC-type N-terminus II K1728_02230 PF07733 Bacterial DNA polymerase III alpha NTPase domain K1728_02230 PF00929 Exonuclease K1728_02230 PF02811 PHP domain K1728_02230 PF14579 Helix-hairpin-helix motif K1728_02230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K1728_02280 PF00005 ABC transporter K1728_02300 PF08032 RNA 2'-O ribose methyltransferase substrate binding K1728_02300 PF00588 SpoU rRNA Methylase family K1728_02340 PF12849 PBP superfamily domain K1728_02345 PF04851 Type III restriction enzyme, res subunit K1728_02345 PF00271 Helicase conserved C-terminal domain K1728_02355 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus K1728_02355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K1728_02360 PF01053 Cys/Met metabolism PLP-dependent enzyme K1728_02370 PF16921 Tex protein YqgF-like domain K1728_02370 PF17674 HHH domain K1728_02370 PF09371 Tex-like protein N-terminal domain K1728_02370 PF00575 S1 RNA binding domain K1728_02385 PF03176 MMPL family K1728_02400 PF03358 NADPH-dependent FMN reductase K1728_02415 PF07690 Major Facilitator Superfamily K1728_02440 PF12072 Domain of unknown function (DUF3552) K1728_02440 PF00013 KH domain K1728_02440 PF01966 HD domain K1728_02445 PF00356 Bacterial regulatory proteins, lacI family K1728_02460 PF00294 pfkB family carbohydrate kinase K1728_02465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K1728_02470 PF01380 SIS domain K1728_02475 PF02378 Phosphotransferase system, EIIC K1728_02475 PF00367 phosphotransferase system, EIIB K1728_02480 PF00232 Glycosyl hydrolase family 1 K1728_02485 PF06993 Protein of unknown function (DUF1304) K1728_02500 PF00005 ABC transporter K1728_02505 PF02687 FtsX-like permease family K1728_02560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K1728_02565 PF01979 Amidohydrolase family K1728_02575 PF02517 CPBP intramembrane metalloprotease K1728_02585 PF02086 D12 class N6 adenine-specific DNA methyltransferase K1728_02610 PF00145 C-5 cytosine-specific DNA methylase K1728_02625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K1728_02625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K1728_02630 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_02635 PF03051 Peptidase C1-like family K1728_02645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K1728_02645 PF01872 RibD C-terminal domain K1728_02650 PF00677 Lumazine binding domain K1728_02655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K1728_02655 PF00925 GTP cyclohydrolase II K1728_02660 PF00885 6,7-dimethyl-8-ribityllumazine synthase K1728_02675 PF03949 Malic enzyme, NAD binding domain K1728_02675 PF00390 Malic enzyme, N-terminal domain K1728_02680 PF08218 Citrate lyase ligase C-terminal domain K1728_02685 PF06857 Malonate decarboxylase delta subunit (MdcD) K1728_02690 PF03328 HpcH/HpaI aldolase/citrate lyase family K1728_02695 PF04223 Citrate lyase, alpha subunit (CitF) K1728_02700 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase K1728_02700 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K1728_02705 PF12697 Alpha/beta hydrolase family K1728_02710 PF03390 2-hydroxycarboxylate transporter family K1728_02725 PF00106 short chain dehydrogenase K1728_02740 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_02740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_02745 PF00478 IMP dehydrogenase / GMP reductase domain K1728_02750 PF00924 Mechanosensitive ion channel K1728_02765 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_02765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_02770 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin K1728_02775 PF13342 C-terminal repeat of topoisomerase K1728_02775 PF01131 DNA topoisomerase K1728_02775 PF01751 Toprim domain K1728_02780 PF07969 Amidohydrolase family K1728_02785 PF13538 UvrD-like helicase C-terminal domain K1728_02790 PF00486 Transcriptional regulatory protein, C terminal K1728_02790 PF00072 Response regulator receiver domain K1728_02795 PF00672 HAMP domain K1728_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_02795 PF00512 His Kinase A (phospho-acceptor) domain K1728_02800 PF06800 Sugar transport protein K1728_02805 PF00480 ROK family K1728_02810 PF01263 Aldose 1-epimerase K1728_02815 PF00342 Phosphoglucose isomerase K1728_02820 PF09285 Elongation factor P, C-terminal K1728_02820 PF08207 Elongation factor P (EF-P) KOW-like domain K1728_02820 PF01132 Elongation factor P (EF-P) OB domain K1728_02825 PF03780 Asp23 family, cell envelope-related function K1728_02830 PF01029 NusB family K1728_02835 PF00707 Translation initiation factor IF-3, C-terminal domain K1728_02835 PF05198 Translation initiation factor IF-3, N-terminal domain K1728_02840 PF01632 Ribosomal protein L35 K1728_02845 PF00453 Ribosomal protein L20 K1728_02845 PF12949 HeH/LEM domain K1728_02860 PF00164 Ribosomal protein S12/S23 K1728_02865 PF00177 Ribosomal protein S7p/S5e K1728_02870 PF00679 Elongation factor G C-terminus K1728_02870 PF14492 Elongation Factor G, domain II K1728_02870 PF03764 Elongation factor G, domain IV K1728_02870 PF00009 Elongation factor Tu GTP binding domain K1728_02870 PF03144 Elongation factor Tu domain 2 K1728_02880 PF00005 ABC transporter K1728_02880 PF08402 TOBE domain K1728_02885 PF00528 Binding-protein-dependent transport system inner membrane component K1728_02890 PF00528 Binding-protein-dependent transport system inner membrane component K1728_02895 PF13416 Bacterial extracellular solute-binding protein K1728_02900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K1728_02910 PF00582 Universal stress protein family K1728_02925 PF02603 HPr Serine kinase N terminus K1728_02925 PF07475 HPr Serine kinase C-terminal domain K1728_02930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K1728_02930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K1728_02935 PF00483 Nucleotidyl transferase K1728_02955 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_02960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K1728_02960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K1728_02970 PF00381 PTS HPr component phosphorylation site K1728_02975 PF05524 PEP-utilising enzyme, N-terminal K1728_02975 PF00391 PEP-utilising enzyme, mobile domain K1728_02975 PF02896 PEP-utilising enzyme, TIM barrel domain K1728_02980 PF00121 Triosephosphate isomerase K1728_02995 PF03952 Enolase, N-terminal domain K1728_02995 PF00113 Enolase, C-terminal TIM barrel domain K1728_03000 PF07690 Major Facilitator Superfamily K1728_03010 PF08206 Ribonuclease B OB domain K1728_03010 PF00575 S1 RNA binding domain K1728_03010 PF00773 RNB domain K1728_03010 PF17876 Cold shock domain K1728_03015 PF01668 SmpB protein K1728_03020 PF00528 Binding-protein-dependent transport system inner membrane component K1728_03025 PF00005 ABC transporter K1728_03030 PF00893 Small Multidrug Resistance protein K1728_03035 PF00893 Small Multidrug Resistance protein K1728_03045 PF03167 Uracil DNA glycosylase superfamily K1728_03050 PF01515 Phosphate acetyl/butaryl transferase K1728_03055 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K1728_03060 PF00583 Acetyltransferase (GNAT) family K1728_03065 PF14480 DNA polymerase III polC-type N-terminus I K1728_03065 PF11490 DNA polymerase III polC-type N-terminus II K1728_03065 PF07733 Bacterial DNA polymerase III alpha NTPase domain K1728_03065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K1728_03065 PF14579 Helix-hairpin-helix motif K1728_03065 PF02811 PHP domain K1728_03065 PF00929 Exonuclease K1728_03070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K1728_03070 PF01565 FAD binding domain K1728_03075 PF00999 Sodium/hydrogen exchanger family K1728_03080 PF02457 DisA bacterial checkpoint controller nucleotide-binding K1728_03085 PF07949 YbbR-like protein K1728_03090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K1728_03090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K1728_03090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K1728_03090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K1728_03115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K1728_03115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K1728_03120 PF01979 Amidohydrolase family K1728_03125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K1728_03125 PF00117 Glutamine amidotransferase class-I K1728_03130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K1728_03130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K1728_03130 PF02142 MGS-like domain K1728_03135 PF01180 Dihydroorotate dehydrogenase K1728_03140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K1728_03145 PF00156 Phosphoribosyl transferase domain K1728_03150 PF13439 Glycosyltransferase Family 4 K1728_03150 PF00534 Glycosyl transferases group 1 K1728_03155 PF13439 Glycosyltransferase Family 4 K1728_03155 PF00534 Glycosyl transferases group 1 K1728_03170 PF00884 Sulfatase K1728_03230 PF03747 ADP-ribosylglycohydrolase K1728_03240 PF00206 Lyase K1728_03240 PF10415 Fumarase C C-terminus K1728_03245 PF03610 PTS system fructose IIA component K1728_03245 PF03830 PTS system sorbose subfamily IIB component K1728_03250 PF03609 PTS system sorbose-specific iic component K1728_03255 PF03613 PTS system mannose/fructose/sorbose family IID component K1728_03265 PF00300 Histidine phosphatase superfamily (branch 1) K1728_03270 PF12459 D-Ala-teichoic acid biosynthesis protein K1728_03275 PF00501 AMP-binding enzyme K1728_03275 PF13193 AMP-binding enzyme C-terminal domain K1728_03280 PF03062 MBOAT, membrane-bound O-acyltransferase family K1728_03285 PF00550 Phosphopantetheine attachment site K1728_03290 PF04914 DltD protein K1728_03310 PF01223 DNA/RNA non-specific endonuclease K1728_03345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K1728_03345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K1728_03350 PF00162 Phosphoglycerate kinase K1728_03355 PF04474 Protein of unknown function (DUF554) K1728_03360 PF03466 LysR substrate binding domain K1728_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K1728_03365 PF00664 ABC transporter transmembrane region K1728_03365 PF00005 ABC transporter K1728_03370 PF00664 ABC transporter transmembrane region K1728_03370 PF00005 ABC transporter K1728_03375 PF13091 PLD-like domain K1728_03375 PF13396 Phospholipase_D-nuclease N-terminal K1728_03380 PF00248 Aldo/keto reductase family K1728_03385 PF00679 Elongation factor G C-terminus K1728_03385 PF00009 Elongation factor Tu GTP binding domain K1728_03385 PF06421 GTP-binding protein LepA C-terminus K1728_03385 PF03144 Elongation factor Tu domain 2 K1728_03390 PF01197 Ribosomal protein L31 K1728_03395 PF04073 Aminoacyl-tRNA editing domain K1728_03410 PF00324 Amino acid permease K1728_03415 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K1728_03450 PF03553 Na+/H+ antiporter family K1728_03455 PF13456 Reverse transcriptase-like K1728_03465 PF00849 RNA pseudouridylate synthase K1728_03465 PF01479 S4 domain K1728_03470 PF00156 Phosphoribosyl transferase domain K1728_03475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K1728_03475 PF00117 Glutamine amidotransferase class-I K1728_03480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K1728_03480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K1728_03480 PF02142 MGS-like domain K1728_03490 PF10397 Adenylosuccinate lyase C-terminus K1728_03490 PF00206 Lyase K1728_03500 PF07977 FabA-like domain K1728_03505 PF01047 MarR family K1728_03510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K1728_03510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K1728_03515 PF00550 Phosphopantetheine attachment site K1728_03520 PF03060 Nitronate monooxygenase K1728_03525 PF00698 Acyl transferase domain K1728_03535 PF00109 Beta-ketoacyl synthase, N-terminal domain K1728_03535 PF02801 Beta-ketoacyl synthase, C-terminal domain K1728_03540 PF00364 Biotin-requiring enzyme K1728_03545 PF07977 FabA-like domain K1728_03550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K1728_03550 PF02785 Biotin carboxylase C-terminal domain K1728_03550 PF00289 Biotin carboxylase, N-terminal domain K1728_03555 PF01039 Carboxyl transferase domain K1728_03560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K1728_03570 PF13344 Haloacid dehalogenase-like hydrolase K1728_03570 PF00293 NUDIX domain K1728_03575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K1728_03580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K1728_03580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K1728_03580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K1728_03580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K1728_03585 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system K1728_03590 PF00144 Beta-lactamase K1728_03595 PF04011 LemA family K1728_03600 PF01435 Peptidase family M48 K1728_03605 PF05958 tRNA (Uracil-5-)-methyltransferase K1728_03605 PF01938 TRAM domain K1728_03610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K1728_03615 PF00270 DEAD/DEAH box helicase K1728_03615 PF00271 Helicase conserved C-terminal domain K1728_03620 PF02629 CoA binding domain K1728_03620 PF06971 Putative DNA-binding protein N-terminus K1728_03630 PF00950 ABC 3 transport family K1728_03630 PF02742 Iron dependent repressor, metal binding and dimerisation domain K1728_03635 PF12822 ECF transporter, substrate-specific component K1728_03640 PF08544 GHMP kinases C terminal K1728_03640 PF00288 GHMP kinases N terminal domain K1728_03645 PF00356 Bacterial regulatory proteins, lacI family K1728_03655 PF00696 Amino acid kinase family K1728_03655 PF13840 ACT domain K1728_03660 PF00842 Alanine racemase, C-terminal domain K1728_03660 PF01168 Alanine racemase, N-terminal domain K1728_03665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K1728_03665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K1728_03670 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal K1728_03670 PF00132 Bacterial transferase hexapeptide (six repeats) K1728_03670 PF14602 Hexapeptide repeat of succinyl-transferase K1728_03675 PF01546 Peptidase family M20/M25/M40 K1728_03675 PF07687 Peptidase dimerisation domain K1728_03680 PF00701 Dihydrodipicolinate synthetase family K1728_03685 PF05173 Dihydrodipicolinate reductase, C-terminus K1728_03685 PF01113 Dihydrodipicolinate reductase, N-terminus K1728_03690 PF00155 Aminotransferase class I and II K1728_03695 PF02774 Semialdehyde dehydrogenase, dimerisation domain K1728_03695 PF01118 Semialdehyde dehydrogenase, NAD binding domain K1728_03705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K1728_03710 PF00561 alpha/beta hydrolase fold K1728_03720 PF00155 Aminotransferase class I and II K1728_03730 PF00392 Bacterial regulatory proteins, gntR family K1728_03730 PF07702 UTRA domain K1728_03735 PF00005 ABC transporter K1728_03750 PF00005 ABC transporter K1728_03755 PF12704 MacB-like periplasmic core domain K1728_03755 PF00005 ABC transporter K1728_03755 PF02687 FtsX-like permease family K1728_03760 PF00356 Bacterial regulatory proteins, lacI family K1728_03770 PF00128 Alpha amylase, catalytic domain K1728_03770 PF02903 Alpha amylase, N-terminal ig-like domain K1728_03775 PF03636 Glycosyl hydrolase family 65, N-terminal domain K1728_03775 PF03632 Glycosyl hydrolase family 65 central catalytic domain K1728_03775 PF03633 Glycosyl hydrolase family 65, C-terminal domain K1728_03780 PF13419 Haloacid dehalogenase-like hydrolase K1728_03785 PF12822 ECF transporter, substrate-specific component K1728_03800 PF13439 Glycosyltransferase Family 4 K1728_03825 PF01488 Shikimate / quinate 5-dehydrogenase K1728_03825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K1728_03825 PF08501 Shikimate dehydrogenase substrate binding domain K1728_03830 PF00793 DAHP synthetase I family K1728_03830 PF18152 DAHP synthase ferredoxin-like domain K1728_03835 PF01761 3-dehydroquinate synthase K1728_03840 PF01264 Chorismate synthase K1728_03845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K1728_03850 PF01202 Shikimate kinase K1728_03855 PF01487 Type I 3-dehydroquinase K1728_03875 PF00005 ABC transporter K1728_03885 PF01180 Dihydroorotate dehydrogenase K1728_03890 PF14572 Phosphoribosyl synthetase-associated domain K1728_03890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K1728_03895 PF00248 Aldo/keto reductase family K1728_03900 PF00294 pfkB family carbohydrate kinase K1728_03915 PF00583 Acetyltransferase (GNAT) family K1728_03915 PF13508 Acetyltransferase (GNAT) domain K1728_03920 PF01566 Natural resistance-associated macrophage protein K1728_03955 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K1728_03955 PF01189 16S rRNA methyltransferase RsmB/F K1728_03955 PF17126 RsmF rRNA methyltransferase first C-terminal domain K1728_03960 PF02686 Glu-tRNAGln amidotransferase C subunit K1728_03965 PF01425 Amidase K1728_03970 PF02637 GatB domain K1728_03970 PF02934 GatB/GatE catalytic domain K1728_03975 PF00781 Diacylglycerol kinase catalytic domain K1728_03985 PF04237 YjbR K1728_03990 PF01297 Zinc-uptake complex component A periplasmic K1728_03995 PF00950 ABC 3 transport family K1728_04000 PF00005 ABC transporter K1728_04005 PF02875 Mur ligase family, glutamate ligase domain K1728_04005 PF08245 Mur ligase middle domain K1728_04010 PF01725 Ham1 family K1728_04015 PF02875 Mur ligase family, glutamate ligase domain K1728_04015 PF08245 Mur ligase middle domain K1728_04025 PF00750 tRNA synthetases class I (R) K1728_04025 PF05746 DALR anticodon binding domain K1728_04025 PF03485 Arginyl tRNA synthetase N terminal domain K1728_04030 PF07722 Peptidase C26 K1728_04035 PF00958 GMP synthase C terminal domain K1728_04035 PF00117 Glutamine amidotransferase class-I K1728_04035 PF13302 Acetyltransferase (GNAT) domain K1728_04035 PF03352 Methyladenine glycosylase K1728_04035 PF13673 Acetyltransferase (GNAT) domain K1728_04050 PF01384 Phosphate transporter family K1728_04055 PF02863 Arginine repressor, C-terminal domain K1728_04055 PF01316 Arginine repressor, DNA binding domain K1728_04060 PF00912 Transglycosylase K1728_04060 PF00905 Penicillin binding protein transpeptidase domain K1728_04065 PF06133 Control of competence regulator ComK, YlbF/YmcA K1728_04070 PF00149 Calcineurin-like phosphoesterase K1728_04075 PF13514 AAA domain K1728_04080 PF01336 OB-fold nucleic acid binding domain K1728_04080 PF01966 HD domain K1728_04085 PF00535 Glycosyl transferase family 2 K1728_04100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K1728_04100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K1728_04105 PF02447 GntP family permease K1728_04110 PF02447 GntP family permease K1728_04120 PF05193 Peptidase M16 inactive domain K1728_04125 PF00675 Insulinase (Peptidase family M16) K1728_04125 PF05193 Peptidase M16 inactive domain K1728_04130 PF13464 Domain of unknown function (DUF4115) K1728_04135 PF01066 CDP-alcohol phosphatidyltransferase K1728_04140 PF00994 Probable molybdopterin binding domain K1728_04140 PF02464 Competence-damaged protein K1728_04140 PF18146 Damage-inducible protein CinA KH domain K1728_04145 PF00154 recA bacterial DNA recombination protein K1728_04155 PF13538 UvrD-like helicase C-terminal domain K1728_04160 PF00485 Phosphoribulokinase / Uridine kinase family K1728_04170 PF16916 Dimerisation domain of Zinc Transporter K1728_04170 PF01545 Cation efflux family K1728_04180 PF00313 'Cold-shock' DNA-binding domain K1728_04185 PF00849 RNA pseudouridylate synthase K1728_04185 PF01479 S4 domain K1728_04205 PF06013 Proteins of 100 residues with WXG K1728_04225 PF10140 WXG100 protein secretion system (Wss), protein YukC K1728_04230 PF12538 DNA transporter K1728_04230 PF01580 FtsK/SpoIIIE family K1728_04275 PF02073 Thermophilic metalloprotease (M29) K1728_04305 PF05651 Putative sugar diacid recognition K1728_04305 PF17853 GGDEF-like domain K1728_04305 PF13556 PucR C-terminal helix-turn-helix domain K1728_04310 PF04138 GtrA-like protein K1728_04320 PF00557 Metallopeptidase family M24 K1728_04330 PF02397 Bacterial sugar transferase K1728_04335 PF00877 NlpC/P60 family K1728_04345 PF00535 Glycosyl transferase family 2 K1728_04350 PF08759 Glycosyltransferase GT-D fold K1728_04350 PF01501 Glycosyl transferase family 8 K1728_04355 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase K1728_04355 PF00535 Glycosyl transferase family 2 K1728_04370 PF00534 Glycosyl transferases group 1 K1728_04370 PF13439 Glycosyltransferase Family 4 K1728_04395 PF00005 ABC transporter K1728_04395 PF01476 LysM domain K1728_04400 PF01061 ABC-2 type transporter K1728_04405 PF00535 Glycosyl transferase family 2 K1728_04410 PF03275 UDP-galactopyranose mutase K1728_04420 PF00535 Glycosyl transferase family 2 K1728_04425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K1728_04425 PF01476 LysM domain K1728_04465 PF01628 HrcA protein C terminal domain K1728_04465 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding K1728_04470 PF01025 GrpE K1728_04475 PF00012 Hsp70 protein K1728_04480 PF00684 DnaJ central domain K1728_04480 PF01556 DnaJ C terminal domain K1728_04480 PF00226 DnaJ domain K1728_04500 PF00753 Metallo-beta-lactamase superfamily K1728_04500 PF12706 Beta-lactamase superfamily domain K1728_04505 PF02272 DHHA1 domain K1728_04505 PF10141 Single-strand DNA-specific exonuclease, C terminal domain K1728_04505 PF17768 RecJ OB domain K1728_04505 PF01368 DHH family K1728_04510 PF00156 Phosphoribosyl transferase domain K1728_04515 PF01726 LexA DNA binding domain K1728_04515 PF00717 Peptidase S24-like K1728_04520 PF05979 Bacterial protein of unknown function (DUF896) K1728_04525 PF03672 Uncharacterised protein family (UPF0154) K1728_04535 PF01467 Cytidylyltransferase-like K1728_04550 PF01553 Acyltransferase K1728_04555 PF05175 Methyltransferase small domain K1728_04560 PF01541 GIY-YIG catalytic domain K1728_04565 PF00318 Ribosomal protein S2 K1728_04585 PF05257 CHAP domain K1728_04585 PF01476 LysM domain K1728_04590 PF00889 Elongation factor TS K1728_04595 PF00696 Amino acid kinase family K1728_04600 PF01765 Ribosome recycling factor K1728_04605 PF00909 Ammonium Transporter Family K1728_04610 PF01380 SIS domain K1728_04625 PF13735 tRNA nucleotidyltransferase domain 2 putative K1728_04625 PF01743 Poly A polymerase head domain K1728_04625 PF12627 Probable RNA and SrmB- binding site of polymerase A K1728_04630 PF16326 ABC transporter C-terminal domain K1728_04630 PF00005 ABC transporter K1728_04630 PF12848 ABC transporter K1728_04635 PF00186 Dihydrofolate reductase K1728_04645 PF07733 Bacterial DNA polymerase III alpha NTPase domain K1728_04645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K1728_04645 PF14579 Helix-hairpin-helix motif K1728_04645 PF02811 PHP domain K1728_04645 PF01336 OB-fold nucleic acid binding domain K1728_04650 PF13291 ACT domain K1728_04650 PF04607 Region found in RelA / SpoT proteins K1728_04650 PF02824 TGS domain K1728_04655 PF02580 D-Tyr-tRNA(Tyr) deacylase K1728_04665 PF00999 Sodium/hydrogen exchanger family K1728_04680 PF13509 S1 domain K1728_04680 PF17783 CvfB-like winged helix domain K1728_04685 PF02899 Phage integrase, N-terminal SAM-like domain K1728_04685 PF00589 Phage integrase family K1728_04695 PF02616 Segregation and condensation protein ScpA K1728_04700 PF04079 Segregation and condensation complex subunit ScpB K1728_04705 PF01479 S4 domain K1728_04705 PF00849 RNA pseudouridylate synthase K1728_04710 PF06736 Protein of unknown function (DUF1211) K1728_04720 PF12822 ECF transporter, substrate-specific component K1728_04730 PF00270 DEAD/DEAH box helicase K1728_04730 PF00271 Helicase conserved C-terminal domain K1728_04740 PF02224 Cytidylate kinase K1728_04745 PF00575 S1 RNA binding domain K1728_04750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K1728_04750 PF01926 50S ribosome-binding GTPase K1728_04755 PF00216 Bacterial DNA-binding protein K1728_04760 PF08543 Phosphomethylpyrimidine kinase K1728_04765 PF07155 ECF-type riboflavin transporter, S component K1728_04770 PF07690 Major Facilitator Superfamily K1728_04775 PF00056 lactate/malate dehydrogenase, NAD binding domain K1728_04775 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K1728_04780 PF00149 Calcineurin-like phosphoesterase K1728_04780 PF12320 Type 5 capsule protein repressor C-terminal domain K1728_04785 PF13476 AAA domain K1728_04860 PF00011 Hsp20/alpha crystallin family K1728_04865 PF04816 tRNA (adenine(22)-N(1))-methyltransferase K1728_04870 PF01784 NIF3 (NGG1p interacting factor 3) K1728_04875 PF07687 Peptidase dimerisation domain K1728_04875 PF01546 Peptidase family M20/M25/M40 K1728_04880 PF00871 Acetokinase family K1728_04890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K1728_04890 PF00364 Biotin-requiring enzyme K1728_04890 PF00289 Biotin carboxylase, N-terminal domain K1728_04890 PF02785 Biotin carboxylase C-terminal domain K1728_04890 PF02436 Conserved carboxylase domain K1728_04890 PF00682 HMGL-like K1728_04915 PF04607 Region found in RelA / SpoT proteins K1728_04920 PF01546 Peptidase family M20/M25/M40 K1728_04920 PF07687 Peptidase dimerisation domain K1728_04925 PF03180 NLPA lipoprotein K1728_04930 PF00471 Ribosomal protein L33 K1728_04935 PF00253 Ribosomal protein S14p/S29e K1728_04940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K1728_04940 PF00205 Thiamine pyrophosphate enzyme, central domain K1728_04940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K1728_04945 PF02311 AraC-like ligand binding domain K1728_04945 PF12833 Helix-turn-helix domain K1728_04950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K1728_04955 PF08544 GHMP kinases C terminal K1728_04955 PF10509 Galactokinase galactose-binding signature K1728_04955 PF00288 GHMP kinases N terminal domain K1728_04960 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain K1728_04960 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain K1728_04965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain K1728_04965 PF02837 Glycosyl hydrolases family 2, sugar binding domain K1728_04965 PF00703 Glycosyl hydrolases family 2 K1728_04970 PF02929 Beta galactosidase small chain K1728_04980 PF03551 Transcriptional regulator PadR-like family K1728_04985 PF01381 Helix-turn-helix K1728_05015 PF01070 FMN-dependent dehydrogenase K1728_05020 PF08544 GHMP kinases C terminal K1728_05020 PF00288 GHMP kinases N terminal domain K1728_05030 PF08544 GHMP kinases C terminal K1728_05030 PF10509 Galactokinase galactose-binding signature K1728_05030 PF00288 GHMP kinases N terminal domain K1728_05035 PF13307 Helicase C-terminal domain K1728_05035 PF04851 Type III restriction enzyme, res subunit K1728_05035 PF00929 Exonuclease K1728_05040 PF03413 Peptidase propeptide and YPEB domain K1728_05040 PF17881 Domain of unknown function (DUF5590) K1728_05045 PF01336 OB-fold nucleic acid binding domain K1728_05045 PF00152 tRNA synthetases class II (D, K and N) K1728_05070 PF07261 Replication initiation and membrane attachment K1728_05075 PF00912 Transglycosylase K1728_05075 PF00905 Penicillin binding protein transpeptidase domain K1728_05080 PF03838 Recombination protein U K1728_05085 PF06908 YspA SLOG family K1728_05090 PF05103 DivIVA protein K1728_05100 PF02926 THUMP domain K1728_05100 PF01170 Putative RNA methylase family UPF0020 K1728_05105 PF00580 UvrD/REP helicase N-terminal domain K1728_05105 PF13361 UvrD-like helicase C-terminal domain K1728_05110 PF12826 Helix-hairpin-helix motif K1728_05110 PF03120 NAD-dependent DNA ligase OB-fold domain K1728_05110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K1728_05110 PF00533 BRCA1 C Terminus (BRCT) domain K1728_05110 PF01653 NAD-dependent DNA ligase adenylation domain K1728_05125 PF00271 Helicase conserved C-terminal domain K1728_05125 PF04851 Type III restriction enzyme, res subunit K1728_05125 PF02151 UvrB/uvrC motif K1728_05125 PF12344 Ultra-violet resistance protein B K1728_05125 PF17757 UvrB interaction domain K1728_05135 PF02785 Biotin carboxylase C-terminal domain K1728_05135 PF00289 Biotin carboxylase, N-terminal domain K1728_05135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K1728_05140 PF01039 Carboxyl transferase domain K1728_05145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K1728_05150 PF00135 Carboxylesterase family K1728_05160 PF00232 Glycosyl hydrolase family 1 K1728_05165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K1728_05170 PF13302 Acetyltransferase (GNAT) domain K1728_05185 PF01070 FMN-dependent dehydrogenase K1728_05195 PF00854 POT family K1728_05200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K1728_05210 PF01230 HIT domain K1728_05215 PF00005 ABC transporter K1728_05225 PF02390 Putative methyltransferase K1728_05230 PF10702 Protein of unknown function (DUF2507) K1728_05270 PF00107 Zinc-binding dehydrogenase K1728_05270 PF08240 Alcohol dehydrogenase GroES-like domain K1728_05290 PF18652 Adhesin P1 N-terminal domain K1728_05290 PF17998 Cell surface antigen I/II C2 terminal domain K1728_05290 PF16364 Cell surface antigen C-terminus K1728_05290 PF08363 Glucan-binding protein C K1728_05290 PF06696 Streptococcal surface antigen repeat K1728_05370 PF02486 Replication initiation factor K1728_05370 PF18106 Rolling Circle replication initiation protein N-terminal domain K1728_05375 PF00665 Integrase core domain K1728_05375 PF13936 Helix-turn-helix domain K1728_05425 PF18652 Adhesin P1 N-terminal domain K1728_05425 PF17998 Cell surface antigen I/II C2 terminal domain K1728_05425 PF16364 Cell surface antigen C-terminus K1728_05425 PF08363 Glucan-binding protein C K1728_05425 PF06696 Streptococcal surface antigen repeat K1728_05490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K1728_05490 PF05257 CHAP domain K1728_05525 PF00665 Integrase core domain K1728_05525 PF13936 Helix-turn-helix domain K1728_05535 PF00665 Integrase core domain K1728_05535 PF13936 Helix-turn-helix domain K1728_05540 PF08363 Glucan-binding protein C K1728_05540 PF16364 Cell surface antigen C-terminus K1728_05540 PF17998 Cell surface antigen I/II C2 terminal domain K1728_05540 PF18652 Adhesin P1 N-terminal domain K1728_05540 PF06696 Streptococcal surface antigen repeat K1728_05580 PF01464 Transglycosylase SLT domain K1728_05580 PF10145 Phage-related minor tail protein K1728_05580 PF01551 Peptidase family M23 K1728_05620 PF00004 ATPase family associated with various cellular activities (AAA) K1728_05620 PF17871 AAA lid domain K1728_05620 PF07724 AAA domain (Cdc48 subfamily) K1728_05620 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_05620 PF02861 Clp amino terminal domain, pathogenicity island component K1728_05640 PF13614 AAA domain K1728_05675 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system K1728_05795 PF13936 Helix-turn-helix domain K1728_05795 PF00665 Integrase core domain K1728_05805 PF05532 CsbD-like K1728_05835 PF17998 Cell surface antigen I/II C2 terminal domain K1728_05835 PF18652 Adhesin P1 N-terminal domain K1728_05835 PF16364 Cell surface antigen C-terminus K1728_05835 PF08363 Glucan-binding protein C K1728_05835 PF00746 LPXTG cell wall anchor motif K1728_05835 PF06696 Streptococcal surface antigen repeat K1728_05850 PF18840 Large polyvalent protein associated domain 25 K1728_05935 PF16123 Hydroxyacylglutathione hydrolase C-terminus K1728_05935 PF00753 Metallo-beta-lactamase superfamily K1728_05940 PF07977 FabA-like domain K1728_05950 PF00109 Beta-ketoacyl synthase, N-terminal domain K1728_05950 PF02801 Beta-ketoacyl synthase, C-terminal domain K1728_05955 PF07690 Major Facilitator Superfamily K1728_05960 PF02796 Helix-turn-helix domain of resolvase K1728_05960 PF00239 Resolvase, N terminal domain K1728_06070 PF01566 Natural resistance-associated macrophage protein K1728_06075 PF00762 Ferrochelatase K1728_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_06080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_06085 PF13302 Acetyltransferase (GNAT) domain K1728_06110 PF13520 Amino acid permease K1728_06120 PF00679 Elongation factor G C-terminus K1728_06120 PF00009 Elongation factor Tu GTP binding domain K1728_06120 PF06421 GTP-binding protein LepA C-terminus K1728_06140 PF06177 QueT transporter K1728_06150 PF13520 Amino acid permease K1728_06155 PF00106 short chain dehydrogenase K1728_06160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K1728_06160 PF03466 LysR substrate binding domain K1728_06165 PF03949 Malic enzyme, NAD binding domain K1728_06165 PF00390 Malic enzyme, N-terminal domain K1728_06180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_06180 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_06185 PF00440 Bacterial regulatory proteins, tetR family K1728_06190 PF00893 Small Multidrug Resistance protein K1728_06195 PF00893 Small Multidrug Resistance protein K1728_06200 PF00005 ABC transporter K1728_06205 PF02687 FtsX-like permease family K1728_06225 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_06225 PF00004 ATPase family associated with various cellular activities (AAA) K1728_06225 PF07724 AAA domain (Cdc48 subfamily) K1728_06225 PF17871 AAA lid domain K1728_06230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K1728_06230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K1728_06240 PF02096 60Kd inner membrane protein K1728_06255 PF14552 Tautomerase enzyme K1728_06260 PF13520 Amino acid permease K1728_06275 PF00512 His Kinase A (phospho-acceptor) domain K1728_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_06275 PF18719 ArlS sensor domain K1728_06280 PF00072 Response regulator receiver domain K1728_06280 PF00486 Transcriptional regulatory protein, C terminal K1728_06295 PF01695 IstB-like ATP binding protein K1728_06295 PF07319 Primosomal protein DnaI N-terminus K1728_06305 PF01121 Dephospho-CoA kinase K1728_06310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K1728_06310 PF06827 Zinc finger found in FPG and IleRS K1728_06310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K1728_06315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K1728_06315 PF01367 5'-3' exonuclease, C-terminal SAM fold K1728_06315 PF00476 DNA polymerase family A K1728_06320 PF01027 Inhibitor of apoptosis-promoting Bax1 K1728_06325 PF01225 Mur ligase family, catalytic domain K1728_06325 PF08245 Mur ligase middle domain K1728_06325 PF02875 Mur ligase family, glutamate ligase domain K1728_06335 PF01588 Putative tRNA binding domain K1728_06335 PF14794 Domain of unknown function (DUF4479) K1728_06340 PF05343 M42 glutamyl aminopeptidase K1728_06345 PF00485 Phosphoribulokinase / Uridine kinase family K1728_06350 PF00512 His Kinase A (phospho-acceptor) domain K1728_06350 PF00989 PAS fold K1728_06350 PF16736 Single Cache-like K1728_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_06355 PF00072 Response regulator receiver domain K1728_06355 PF00486 Transcriptional regulatory protein, C terminal K1728_06360 PF07690 Major Facilitator Superfamily K1728_06380 PF04545 Sigma-70, region 4 K1728_06380 PF00140 Sigma-70 factor, region 1.2 K1728_06380 PF04542 Sigma-70 region 2 K1728_06380 PF04539 Sigma-70 region 3 K1728_06380 PF03979 Sigma-70 factor, region 1.1 K1728_06385 PF08275 DNA primase catalytic core, N-terminal domain K1728_06385 PF10410 DnaB-helicase binding domain of primase K1728_06385 PF01807 CHC2 zinc finger K1728_06390 PF00665 Integrase core domain K1728_06390 PF13936 Helix-turn-helix domain K1728_06395 PF13614 AAA domain K1728_06435 PF18840 Large polyvalent protein associated domain 25 K1728_06535 PF07724 AAA domain (Cdc48 subfamily) K1728_06535 PF17871 AAA lid domain K1728_06535 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_06535 PF00004 ATPase family associated with various cellular activities (AAA) K1728_06535 PF02861 Clp amino terminal domain, pathogenicity island component K1728_06550 PF01131 DNA topoisomerase K1728_06550 PF01751 Toprim domain K1728_06565 PF00216 Bacterial DNA-binding protein K1728_06635 PF18008 Replication initiator protein A C-terminal domain K1728_06635 PF06970 Replication initiator protein A (RepA) N-terminus K1728_06645 PF07690 Major Facilitator Superfamily K1728_06650 PF00334 Nucleoside diphosphate kinase K1728_06655 PF05362 Lon protease (S16) C-terminal proteolytic domain K1728_06655 PF13180 PDZ domain K1728_06660 PF01467 Cytidylyltransferase-like K1728_06670 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) K1728_06675 PF01098 Cell cycle protein K1728_06680 PF03144 Elongation factor Tu domain 2 K1728_06680 PF00009 Elongation factor Tu GTP binding domain K1728_06680 PF14492 Elongation Factor G, domain II K1728_06680 PF00679 Elongation factor G C-terminus K1728_06685 PF00459 Inositol monophosphatase family K1728_06690 PF05256 Uncharacterised protein family (UPF0223) K1728_06695 PF01327 Polypeptide deformylase K1728_06710 PF07288 Protein of unknown function (DUF1447) K1728_06715 PF17770 Ribonuclease J C-terminal domain K1728_06715 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K1728_06715 PF00753 Metallo-beta-lactamase superfamily K1728_06725 PF13419 Haloacid dehalogenase-like hydrolase K1728_06730 PF00781 Diacylglycerol kinase catalytic domain K1728_06735 PF01625 Peptide methionine sulfoxide reductase K1728_06740 PF03180 NLPA lipoprotein K1728_06745 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_06745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_06750 PF00528 Binding-protein-dependent transport system inner membrane component K1728_06755 PF00005 ABC transporter K1728_06755 PF00571 CBS domain K1728_06765 PF01368 DHH family K1728_06765 PF02833 DHHA2 domain K1728_06770 PF00521 DNA gyrase/topoisomerase IV, subunit A K1728_06770 PF03989 DNA gyrase C-terminal domain, beta-propeller K1728_06775 PF01751 Toprim domain K1728_06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_06775 PF00986 DNA gyrase B subunit, carboxyl terminus K1728_06775 PF00204 DNA gyrase B K1728_06780 PF02660 Glycerol-3-phosphate acyltransferase K1728_06790 PF00589 Phage integrase family K1728_06790 PF02899 Phage integrase, N-terminal SAM-like domain K1728_06795 PF01131 DNA topoisomerase K1728_06795 PF01751 Toprim domain K1728_06795 PF01396 Topoisomerase DNA binding C4 zinc finger K1728_06800 PF02481 DNA recombination-mediator protein A K1728_06800 PF18255 DNA processing protein A sterile alpha motif domain K1728_06805 PF01351 Ribonuclease HII K1728_06810 PF01926 50S ribosome-binding GTPase K1728_06815 PF06855 YozE SAM-like fold K1728_06825 PF13472 GDSL-like Lipase/Acylhydrolase family K1728_06830 PF02645 Uncharacterised protein, DegV family COG1307 K1728_06835 PF02645 Uncharacterised protein, DegV family COG1307 K1728_06840 PF11700 Vacuole effluxer Atg22 like K1728_06855 PF03932 CutC family K1728_06860 PF05670 NFACT protein RNA binding domain K1728_06865 PF06574 FAD synthetase K1728_06865 PF01687 Riboflavin kinase K1728_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_06885 PF01509 TruB family pseudouridylate synthase (N terminal domain) K1728_06885 PF16198 tRNA pseudouridylate synthase B C-terminal domain K1728_06890 PF02033 Ribosome-binding factor A K1728_06895 PF00009 Elongation factor Tu GTP binding domain K1728_06895 PF11987 Translation-initiation factor 2 K1728_06895 PF04760 Translation initiation factor IF-2, N-terminal region K1728_06900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family K1728_06905 PF04296 Protein of unknown function (DUF448) K1728_06910 PF08529 NusA N-terminal domain K1728_06910 PF13184 NusA-like KH domain K1728_06910 PF00575 S1 RNA binding domain K1728_06915 PF02576 RimP N-terminal domain K1728_06915 PF17384 RimP C-terminal SH3 domain K1728_06925 PF01070 FMN-dependent dehydrogenase K1728_06930 PF07690 Major Facilitator Superfamily K1728_06950 PF01565 FAD binding domain K1728_06950 PF09330 D-lactate dehydrogenase, membrane binding K1728_06960 PF01264 Chorismate synthase K1728_06965 PF07690 Major Facilitator Superfamily K1728_06970 PF01202 Shikimate kinase K1728_06980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K1728_07010 PF13536 Putative multidrug resistance efflux transporter K1728_07015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K1728_07015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K1728_07020 PF07690 Major Facilitator Superfamily K1728_07025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K1728_07025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K1728_07030 PF00294 pfkB family carbohydrate kinase K1728_07035 PF00455 DeoR C terminal sensor domain K1728_07035 PF08220 DeoR-like helix-turn-helix domain K1728_07040 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K1728_07045 PF00480 ROK family K1728_07060 PF00232 Glycosyl hydrolase family 1 K1728_07065 PF01418 Helix-turn-helix domain, rpiR family K1728_07065 PF01380 SIS domain K1728_07100 PF00005 ABC transporter K1728_07110 PF00440 Bacterial regulatory proteins, tetR family K1728_07115 PF00583 Acetyltransferase (GNAT) family K1728_07120 PF01047 MarR family K1728_07135 PF02627 Carboxymuconolactone decarboxylase family K1728_07140 PF00248 Aldo/keto reductase family K1728_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K1728_07150 PF03466 LysR substrate binding domain K1728_07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_07165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K1728_07180 PF00005 ABC transporter K1728_07180 PF12848 ABC transporter K1728_07195 PF04237 YjbR K1728_07210 PF00106 short chain dehydrogenase K1728_07215 PF08240 Alcohol dehydrogenase GroES-like domain K1728_07215 PF13823 Alcohol dehydrogenase GroES-associated K1728_07215 PF00107 Zinc-binding dehydrogenase K1728_07235 PF07690 Major Facilitator Superfamily K1728_07240 PF05025 RbsD / FucU transport protein family K1728_07245 PF01987 Mitochondrial biogenesis AIM24 K1728_07265 PF00005 ABC transporter K1728_07270 PF07690 Major Facilitator Superfamily K1728_07275 PF01769 Divalent cation transporter K1728_07275 PF00571 CBS domain K1728_07275 PF03448 MgtE intracellular N domain K1728_07280 PF00849 RNA pseudouridylate synthase K1728_07285 PF01513 ATP-NAD kinase K1728_07290 PF04607 Region found in RelA / SpoT proteins K1728_07305 PF01725 Ham1 family K1728_07310 PF01177 Asp/Glu/Hydantoin racemase K1728_07315 PF13419 Haloacid dehalogenase-like hydrolase K1728_07385 PF00106 short chain dehydrogenase K1728_07395 PF02581 Thiamine monophosphate synthase K1728_07400 PF08543 Phosphomethylpyrimidine kinase K1728_07405 PF02110 Hydroxyethylthiazole kinase family K1728_07430 PF00232 Glycosyl hydrolase family 1 K1728_07485 PF06114 IrrE N-terminal-like domain K1728_07510 PF04851 Type III restriction enzyme, res subunit K1728_07510 PF08774 VRR-NUC domain K1728_07515 PF18273 Type III R-M EcoP15I C-terminal domain K1728_07515 PF01555 DNA methylase K1728_07525 PF13538 UvrD-like helicase C-terminal domain K1728_07555 PF13407 Periplasmic binding protein domain K1728_07555 PF00356 Bacterial regulatory proteins, lacI family K1728_07560 PF00251 Glycosyl hydrolases family 32 N-terminal domain K1728_07560 PF08244 Glycosyl hydrolases family 32 C terminal K1728_07565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K1728_07565 PF02378 Phosphotransferase system, EIIC K1728_07565 PF00367 phosphotransferase system, EIIB K1728_07580 PF10502 Signal peptidase, peptidase S26 K1728_07600 PF13538 UvrD-like helicase C-terminal domain K1728_07630 PF07687 Peptidase dimerisation domain K1728_07630 PF01546 Peptidase family M20/M25/M40 K1728_07635 PF11838 ERAP1-like C-terminal domain K1728_07635 PF01433 Peptidase family M1 domain K1728_07675 PF00041 Fibronectin type III domain K1728_07675 PF00704 Glycosyl hydrolases family 18 K1728_07705 PF00528 Binding-protein-dependent transport system inner membrane component K1728_07710 PF00528 Binding-protein-dependent transport system inner membrane component K1728_07715 PF17912 MalK OB fold domain K1728_07715 PF00005 ABC transporter K1728_07720 PF02872 5'-nucleotidase, C-terminal domain K1728_07720 PF00149 Calcineurin-like phosphoesterase K1728_07725 PF00132 Bacterial transferase hexapeptide (six repeats) K1728_07725 PF14602 Hexapeptide repeat of succinyl-transferase K1728_07725 PF12464 Maltose acetyltransferase K1728_07730 PF11762 L-arabinose isomerase C-terminal domain K1728_07730 PF02610 L-arabinose isomerase K1728_07735 PF00596 Class II Aldolase and Adducin N-terminal domain K1728_07745 PF01306 LacY proton/sugar symporter K1728_07750 PF04616 Glycosyl hydrolases family 43 K1728_07750 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain K1728_07755 PF00392 Bacterial regulatory proteins, gntR family K1728_07765 PF00248 Aldo/keto reductase family K1728_07770 PF02610 L-arabinose isomerase K1728_07770 PF11762 L-arabinose isomerase C-terminal domain K1728_07775 PF00596 Class II Aldolase and Adducin N-terminal domain K1728_07785 PF00083 Sugar (and other) transporter K1728_07790 PF00085 Thioredoxin K1728_07810 PF02350 UDP-N-acetylglucosamine 2-epimerase K1728_07815 PF01270 Glycosyl hydrolases family 8 K1728_07840 PF00488 MutS domain V K1728_07840 PF01713 Smr domain K1728_07860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K1728_07865 PF01926 50S ribosome-binding GTPase K1728_07870 PF07724 AAA domain (Cdc48 subfamily) K1728_07870 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_07870 PF06689 ClpX C4-type zinc finger K1728_07875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K1728_07875 PF05698 Bacterial trigger factor protein (TF) C-terminus K1728_07875 PF05697 Bacterial trigger factor protein (TF) K1728_07890 PF00009 Elongation factor Tu GTP binding domain K1728_07890 PF03144 Elongation factor Tu domain 2 K1728_07890 PF03143 Elongation factor Tu C-terminal domain K1728_07900 PF00753 Metallo-beta-lactamase superfamily K1728_07900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K1728_07900 PF17770 Ribonuclease J C-terminal domain K1728_07915 PF01649 Ribosomal protein S20 K1728_07920 PF00312 Ribosomal protein S15 K1728_07925 PF06144 DNA polymerase III, delta subunit K1728_07930 PF03772 Competence protein K1728_07930 PF13567 Domain of unknown function (DUF4131) K1728_07930 PF00753 Metallo-beta-lactamase superfamily K1728_07935 PF10531 SLBB domain K1728_07940 PF06949 Protein of unknown function (DUF1292) K1728_07945 PF06949 Protein of unknown function (DUF1292) K1728_07950 PF03652 Holliday junction resolvase K1728_07955 PF06135 IreB regulatory phosphoprotein K1728_07960 PF02272 DHHA1 domain K1728_07960 PF01411 tRNA synthetases class II (A) K1728_07960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K1728_07965 PF02595 Glycerate kinase family K1728_07980 PF00270 DEAD/DEAH box helicase K1728_07980 PF00271 Helicase conserved C-terminal domain K1728_07985 PF01368 DHH family K1728_07985 PF02272 DHHA1 domain K1728_07990 PF11799 impB/mucB/samB family C-terminal domain K1728_07990 PF00817 impB/mucB/samB family K1728_07995 PF02699 Preprotein translocase subunit K1728_08000 PF01702 Queuine tRNA-ribosyltransferase K1728_08035 PF02547 Queuosine biosynthesis protein K1728_08040 PF17864 RuvB AAA lid domain K1728_08040 PF05491 RuvB C-terminal winged helix domain K1728_08040 PF05496 Holliday junction DNA helicase RuvB P-loop domain K1728_08045 PF07499 RuvA, C-terminal domain K1728_08045 PF01330 RuvA N terminal domain K1728_08050 PF13382 Adenine deaminase C-terminal domain K1728_08050 PF01979 Amidohydrolase family K1728_08055 PF00571 CBS domain K1728_08055 PF00478 IMP dehydrogenase / GMP reductase domain K1728_08060 PF00571 CBS domain K1728_08060 PF00478 IMP dehydrogenase / GMP reductase domain K1728_08065 PF07690 Major Facilitator Superfamily K1728_08065 PF00083 Sugar (and other) transporter K1728_08075 PF01205 Uncharacterized protein family UPF0029 K1728_08075 PF09186 Domain of unknown function (DUF1949) K1728_08080 PF09269 Domain of unknown function (DUF1967) K1728_08080 PF01926 50S ribosome-binding GTPase K1728_08080 PF01018 GTP1/OBG K1728_08085 PF08459 UvrC Helix-hairpin-helix N-terminal K1728_08085 PF02151 UvrB/uvrC motif K1728_08085 PF01541 GIY-YIG catalytic domain K1728_08105 PF13732 Domain of unknown function (DUF4162) K1728_08105 PF00005 ABC transporter K1728_08115 PF17854 FtsK alpha domain K1728_08115 PF01580 FtsK/SpoIIIE family K1728_08115 PF09397 Ftsk gamma domain K1728_08120 PF00588 SpoU rRNA Methylase family K1728_08125 PF01594 AI-2E family transporter K1728_08130 PF10282 Lactonase, 7-bladed beta-propeller K1728_08135 PF01042 Endoribonuclease L-PSP K1728_08140 PF03741 Integral membrane protein TerC family K1728_08150 PF02092 Glycyl-tRNA synthetase beta subunit K1728_08155 PF02091 Glycyl-tRNA synthetase alpha subunit K1728_08170 PF02565 Recombination protein O C terminal K1728_08170 PF11967 Recombination protein O N terminal K1728_08175 PF07650 KH domain K1728_08175 PF01926 50S ribosome-binding GTPase K1728_08180 PF01219 Prokaryotic diacylglycerol kinase K1728_08185 PF02130 Uncharacterized protein family UPF0054 K1728_08190 PF02562 PhoH-like protein K1728_08195 PF09424 Yqey-like protein K1728_08200 PF01165 Ribosomal protein S21 K1728_08205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K1728_08205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K1728_08215 PF00152 tRNA synthetases class II (D, K and N) K1728_08215 PF01336 OB-fold nucleic acid binding domain K1728_08215 PF02938 GAD domain K1728_08220 PF03129 Anticodon binding domain K1728_08220 PF13393 Histidyl-tRNA synthetase K1728_08230 PF01520 N-acetylmuramoyl-L-alanine amidase K1728_08230 PF08239 Bacterial SH3 domain K1728_08245 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal K1728_08245 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal K1728_08250 PF02441 Flavoprotein K1728_08250 PF04127 DNA / pantothenate metabolism flavoprotein K1728_08325 PF01321 Creatinase/Prolidase N-terminal domain K1728_08325 PF00557 Metallopeptidase family M24 K1728_08330 PF00356 Bacterial regulatory proteins, lacI family K1728_08345 PF00230 Major intrinsic protein K1728_08350 PF01432 Peptidase family M3 K1728_08350 PF08439 Oligopeptidase F K1728_08360 PF02378 Phosphotransferase system, EIIC K1728_08365 PF00232 Glycosyl hydrolase family 1 K1728_08370 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit K1728_08375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K1728_08380 PF00232 Glycosyl hydrolase family 1 K1728_08385 PF05389 Negative regulator of genetic competence (MecA) K1728_08390 PF03960 ArsC family K1728_08395 PF05816 Toxic anion resistance protein (TelA) K1728_08450 PF01741 Large-conductance mechanosensitive channel, MscL K1728_08455 PF01712 Deoxynucleoside kinase K1728_08460 PF00877 NlpC/P60 family K1728_08465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K1728_08465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K1728_08470 PF01361 Tautomerase enzyme K1728_08475 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K1728_08475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K1728_08480 PF00375 Sodium:dicarboxylate symporter family K1728_08485 PF01245 Ribosomal protein L19 K1728_08490 PF01746 tRNA (Guanine-1)-methyltransferase K1728_08495 PF01782 RimM N-terminal domain K1728_08495 PF05239 PRC-barrel domain K1728_08500 PF00300 Histidine phosphatase superfamily (branch 1) K1728_08510 PF00886 Ribosomal protein S16 K1728_08530 PF02978 Signal peptide binding domain K1728_08530 PF02881 SRP54-type protein, helical bundle domain K1728_08530 PF00448 SRP54-type protein, GTPase domain K1728_08535 PF04297 Putative helix-turn-helix protein, YlxM / p13 like K1728_08540 PF00448 SRP54-type protein, GTPase domain K1728_08540 PF02881 SRP54-type protein, helical bundle domain K1728_08545 PF02463 RecF/RecN/SMC N terminal domain K1728_08545 PF06470 SMC proteins Flexible Hinge Domain K1728_08550 PF14622 Ribonuclease-III-like K1728_08550 PF00035 Double-stranded RNA binding motif K1728_08555 PF00550 Phosphopantetheine attachment site K1728_08560 PF02504 Fatty acid synthesis protein K1728_08565 PF17191 RecG wedge domain K1728_08565 PF00271 Helicase conserved C-terminal domain K1728_08565 PF00270 DEAD/DEAH box helicase K1728_08575 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain K1728_08575 PF04616 Glycosyl hydrolases family 43 K1728_08585 PF06100 MCRA family K1728_08590 PF13684 Dihydroxyacetone kinase family K1728_08590 PF02734 DAK2 domain K1728_08595 PF03780 Asp23 family, cell envelope-related function K1728_08600 PF00830 Ribosomal L28 family K1728_08605 PF04263 Thiamin pyrophosphokinase, catalytic domain K1728_08605 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain K1728_08610 PF00834 Ribulose-phosphate 3 epimerase family K1728_08615 PF03193 RsgA GTPase K1728_08615 PF16745 RsgA N-terminal domain K1728_08620 PF03793 PASTA domain K1728_08620 PF00069 Protein kinase domain K1728_08630 PF01189 16S rRNA methyltransferase RsmB/F K1728_08630 PF01029 NusB family K1728_08635 PF02911 Formyl transferase, C-terminal domain K1728_08635 PF00551 Formyl transferase K1728_08640 PF00271 Helicase conserved C-terminal domain K1728_08640 PF17764 3′ DNA-binding domain (3′BD) K1728_08640 PF18074 Primosomal protein N C-terminal domain K1728_08640 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K1728_08640 PF04851 Type III restriction enzyme, res subunit K1728_08665 PF00871 Acetokinase family K1728_08695 PF08334 Type II secretion system (T2SS), protein G K1728_08695 PF07963 Prokaryotic N-terminal methylation motif K1728_08705 PF00437 Type II/IV secretion system protein K1728_08710 PF00860 Permease family K1728_08715 PF01709 Transcriptional regulator K1728_08720 PF13538 UvrD-like helicase C-terminal domain K1728_08720 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain K1728_08720 PF14490 Helix-hairpin-helix containing domain K1728_08730 PF00300 Histidine phosphatase superfamily (branch 1) K1728_08735 PF06827 Zinc finger found in FPG and IleRS K1728_08735 PF00133 tRNA synthetases class I (I, L, M and V) K1728_08735 PF08264 Anticodon-binding domain of tRNA K1728_08740 PF05103 DivIVA protein K1728_08755 PF04472 Cell division protein SepF K1728_08760 PF00091 Tubulin/FtsZ family, GTPase domain K1728_08760 PF12327 FtsZ family, C-terminal domain K1728_08765 PF02491 SHS2 domain inserted in FTSA K1728_08765 PF11983 Membrane-attachment and polymerisation-promoting switch K1728_08770 PF08478 POTRA domain, FtsQ-type K1728_08770 PF03799 Cell division protein FtsQ K1728_08775 PF03033 Glycosyltransferase family 28 N-terminal domain K1728_08775 PF04101 Glycosyltransferase family 28 C-terminal domain K1728_08780 PF02875 Mur ligase family, glutamate ligase domain K1728_08780 PF08245 Mur ligase middle domain K1728_08785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K1728_08785 PF00953 Glycosyl transferase family 4 K1728_08790 PF03793 PASTA domain K1728_08790 PF03717 Penicillin-binding Protein dimerisation domain K1728_08790 PF00905 Penicillin binding protein transpeptidase domain K1728_08800 PF01795 MraW methylase family K1728_08805 PF02381 MraZ protein, putative antitoxin-like K1728_08815 PF04452 RNA methyltransferase K1728_08825 PF00224 Pyruvate kinase, barrel domain K1728_08825 PF00391 PEP-utilising enzyme, mobile domain K1728_08825 PF02887 Pyruvate kinase, alpha/beta domain K1728_08830 PF00324 Amino acid permease K1728_08845 PF01268 Formate--tetrahydrofolate ligase K1728_08850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K1728_08850 PF02843 Phosphoribosylglycinamide synthetase, C domain K1728_08850 PF02844 Phosphoribosylglycinamide synthetase, N domain K1728_08855 PF02142 MGS-like domain K1728_08855 PF01808 AICARFT/IMPCHase bienzyme K1728_08860 PF00551 Formyl transferase K1728_08865 PF02769 AIR synthase related protein, C-terminal domain K1728_08865 PF00586 AIR synthase related protein, N-terminal domain K1728_08870 PF13537 Glutamine amidotransferase domain K1728_08870 PF00156 Phosphoribosyl transferase domain K1728_08875 PF00586 AIR synthase related protein, N-terminal domain K1728_08875 PF02769 AIR synthase related protein, C-terminal domain K1728_08875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K1728_08885 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase K1728_08890 PF01259 SAICAR synthetase K1728_08895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K1728_08895 PF02222 ATP-grasp domain K1728_08900 PF00731 AIR carboxylase K1728_08905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K1728_08905 PF00925 GTP cyclohydrolase II K1728_08910 PF00497 Bacterial extracellular solute-binding proteins, family 3 K1728_08915 PF00005 ABC transporter K1728_08920 PF00528 Binding-protein-dependent transport system inner membrane component K1728_08930 PF00194 Eukaryotic-type carbonic anhydrase K1728_08935 PF04085 rod shape-determining protein MreC K1728_08945 PF04002 RadC-like JAB domain K1728_08960 PF02378 Phosphotransferase system, EIIC K1728_08960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K1728_08960 PF00367 phosphotransferase system, EIIB K1728_08965 PF02645 Uncharacterised protein, DegV family COG1307 K1728_08970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K1728_08975 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K1728_08980 PF00654 Voltage gated chloride channel K1728_08985 PF00005 ABC transporter K1728_08990 PF02653 Branched-chain amino acid transport system / permease component K1728_09000 PF00268 Ribonucleotide reductase, small chain K1728_09005 PF02867 Ribonucleotide reductase, barrel domain K1728_09005 PF00317 Ribonucleotide reductase, all-alpha domain K1728_09005 PF08343 Ribonucleotide reductase N-terminal K1728_09010 PF00462 Glutaredoxin K1728_09015 PF07972 NrdI Flavodoxin like K1728_09045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K1728_09050 PF01048 Phosphorylase superfamily K1728_09060 PF00293 NUDIX domain K1728_09065 PF00313 'Cold-shock' DNA-binding domain K1728_09085 PF02222 ATP-grasp domain K1728_09085 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K1728_09090 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K1728_09090 PF13457 GW (Gly-Tryp) dipeptide domain K1728_09095 PF00664 ABC transporter transmembrane region K1728_09095 PF00005 ABC transporter K1728_09100 PF00664 ABC transporter transmembrane region K1728_09100 PF00005 ABC transporter K1728_09105 PF02322 Cytochrome bd terminal oxidase subunit II K1728_09110 PF01654 Cytochrome bd terminal oxidase subunit I K1728_09115 PF12822 ECF transporter, substrate-specific component K1728_09120 PF02371 Transposase IS116/IS110/IS902 family K1728_09120 PF01548 Transposase K1728_09130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K1728_09130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K1728_09240 PF00575 S1 RNA binding domain K1728_09245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K1728_09250 PF09335 SNARE associated Golgi protein K1728_09255 PF01192 RNA polymerase Rpb6 K1728_09260 PF00625 Guanylate kinase K1728_09270 PF13476 AAA domain K1728_09275 PF02863 Arginine repressor, C-terminal domain K1728_09275 PF01316 Arginine repressor, DNA binding domain K1728_09280 PF01728 FtsJ-like methyltransferase K1728_09280 PF01479 S4 domain K1728_09285 PF00348 Polyprenyl synthetase K1728_09290 PF02609 Exonuclease VII small subunit K1728_09295 PF13742 OB-fold nucleic acid binding domain K1728_09295 PF02601 Exonuclease VII, large subunit K1728_09300 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K1728_09300 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K1728_09305 PF07155 ECF-type riboflavin transporter, S component K1728_09320 PF00005 ABC transporter K1728_09325 PF02687 FtsX-like permease family K1728_09325 PF12704 MacB-like periplasmic core domain K1728_09335 PF00216 Bacterial DNA-binding protein K1728_09340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K1728_09345 PF03129 Anticodon binding domain K1728_09345 PF02824 TGS domain K1728_09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K1728_09345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K1728_09370 PF08676 MutL C terminal dimerisation domain K1728_09370 PF01119 DNA mismatch repair protein, C-terminal domain K1728_09375 PF05192 MutS domain III K1728_09375 PF05188 MutS domain II K1728_09375 PF01624 MutS domain I K1728_09375 PF05190 MutS family domain IV K1728_09375 PF00488 MutS domain V K1728_09385 PF05636 HIGH Nucleotidyl Transferase K1728_09390 PF13649 Methyltransferase domain K1728_09400 PF01966 HD domain K1728_09405 PF01467 Cytidylyltransferase-like K1728_09415 PF01926 50S ribosome-binding GTPase K1728_09425 PF01820 D-ala D-ala ligase N-terminus K1728_09425 PF07478 D-ala D-ala ligase C-terminus K1728_09435 PF13520 Amino acid permease K1728_09440 PF00118 TCP-1/cpn60 chaperonin family K1728_09445 PF00166 Chaperonin 10 Kd subunit K1728_09455 PF07690 Major Facilitator Superfamily K1728_09460 PF00005 ABC transporter K1728_09460 PF16326 ABC transporter C-terminal domain K1728_09460 PF12848 ABC transporter K1728_09475 PF02875 Mur ligase family, glutamate ligase domain K1728_09475 PF08245 Mur ligase middle domain K1728_09480 PF10458 Valyl tRNA synthetase tRNA binding arm K1728_09480 PF08264 Anticodon-binding domain of tRNA K1728_09480 PF00133 tRNA synthetases class I (I, L, M and V) K1728_09495 PF03006 Haemolysin-III related K1728_09515 PF00582 Universal stress protein family K1728_09525 PF16193 AAA C-terminal domain K1728_09525 PF12002 MgsA AAA+ ATPase C terminal K1728_09525 PF05496 Holliday junction DNA helicase RuvB P-loop domain K1728_09540 PF00009 Elongation factor Tu GTP binding domain K1728_09540 PF03144 Elongation factor Tu domain 2 K1728_09540 PF16658 Class II release factor RF3, C-terminal domain K1728_09550 PF04167 Protein of unknown function (DUF402) K1728_09555 PF02631 RecX family K1728_09560 PF01895 PhoU domain K1728_09565 PF00005 ABC transporter K1728_09570 PF00005 ABC transporter K1728_09575 PF00528 Binding-protein-dependent transport system inner membrane component K1728_09580 PF00528 Binding-protein-dependent transport system inner membrane component K1728_09585 PF12849 PBP superfamily domain K1728_09600 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_09605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K1728_09605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K1728_09610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K1728_09615 PF13344 Haloacid dehalogenase-like hydrolase K1728_09620 PF06265 Protein of unknown function (DUF1027) K1728_09640 PF01321 Creatinase/Prolidase N-terminal domain K1728_09640 PF00557 Metallopeptidase family M24 K1728_09645 PF13378 Enolase C-terminal domain-like K1728_09645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K1728_09650 PF00561 alpha/beta hydrolase fold K1728_09655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K1728_09655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K1728_09655 PF16582 Middle domain of thiamine pyrophosphate K1728_09660 PF00425 chorismate binding enzyme K1728_09665 PF00664 ABC transporter transmembrane region K1728_09665 PF00005 ABC transporter K1728_09680 PF14310 Fibronectin type III-like domain K1728_09680 PF00933 Glycosyl hydrolase family 3 N terminal domain K1728_09680 PF01915 Glycosyl hydrolase family 3 C-terminal domain K1728_09680 PF07691 PA14 domain K1728_09695 PF01016 Ribosomal L27 protein K1728_09700 PF00829 Ribosomal prokaryotic L21 protein K1728_09725 PF03951 Glutamine synthetase, beta-Grasp domain K1728_09725 PF00120 Glutamine synthetase, catalytic domain K1728_09730 PF13411 MerR HTH family regulatory protein K1728_09750 PF00581 Rhodanese-like domain K1728_09755 PF01476 LysM domain K1728_09755 PF01551 Peptidase family M23 K1728_09760 PF05257 CHAP domain K1728_09760 PF01476 LysM domain K1728_09765 PF00480 ROK family K1728_09780 PF01812 5-formyltetrahydrofolate cyclo-ligase family K1728_09785 PF03717 Penicillin-binding Protein dimerisation domain K1728_09785 PF00905 Penicillin binding protein transpeptidase domain K1728_09795 PF03449 Transcription elongation factor, N-terminal K1728_09795 PF01272 Transcription elongation factor, GreA/GreB, C-term K1728_09800 PF00570 HRDC domain K1728_09800 PF09382 RQC domain K1728_09800 PF00270 DEAD/DEAH box helicase K1728_09800 PF16124 RecQ zinc-binding K1728_09800 PF00271 Helicase conserved C-terminal domain K1728_09805 PF02618 YceG-like family K1728_09810 PF03483 B3/4 domain K1728_09810 PF03484 tRNA synthetase B5 domain K1728_09810 PF01588 Putative tRNA binding domain K1728_09810 PF03147 Ferredoxin-fold anticodon binding domain K1728_09810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K1728_09815 PF01409 tRNA synthetases class II core domain (F) K1728_09815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K1728_09820 PF01638 HxlR-like helix-turn-helix K1728_09845 PF08032 RNA 2'-O ribose methyltransferase substrate binding K1728_09845 PF00588 SpoU rRNA Methylase family K1728_09850 PF02388 FemAB family K1728_09870 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K1728_09875 PF01116 Fructose-bisphosphate aldolase class-II K1728_09880 PF03462 PCRF domain K1728_09880 PF00472 RF-1 domain K1728_09885 PF07516 SecA Wing and Scaffold domain K1728_09885 PF07517 SecA DEAD-like domain K1728_09885 PF01043 SecA preprotein cross-linking domain K1728_09890 PF00749 tRNA synthetases class I (E and Q), catalytic domain K1728_09900 PF18073 Rubredoxin metal binding domain K1728_09905 PF00692 dUTPase K1728_09920 PF01476 LysM domain K1728_09920 PF00877 NlpC/P60 family K1728_09925 PF08240 Alcohol dehydrogenase GroES-like domain K1728_09925 PF00107 Zinc-binding dehydrogenase K1728_09930 PF03306 Alpha-acetolactate decarboxylase K1728_09935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K1728_09935 PF00205 Thiamine pyrophosphate enzyme, central domain K1728_09935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K1728_09940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K1728_09940 PF00056 lactate/malate dehydrogenase, NAD binding domain K1728_09955 PF00535 Glycosyl transferase family 2 K1728_09965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K1728_10040 PF13495 Phage integrase, N-terminal SAM-like domain K1728_10040 PF00589 Phage integrase family K1728_10090 PF13495 Phage integrase, N-terminal SAM-like domain K1728_10090 PF00589 Phage integrase family K1728_10110 PF01566 Natural resistance-associated macrophage protein K1728_10115 PF01783 Ribosomal L32p protein family K1728_10120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K1728_10120 PF00367 phosphotransferase system, EIIB K1728_10120 PF02378 Phosphotransferase system, EIIC K1728_10130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K1728_10130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K1728_10135 PF00574 Clp protease K1728_10140 PF02650 WhiA C-terminal HTH domain K1728_10140 PF14527 WhiA LAGLIDADG-like domain K1728_10140 PF10298 WhiA N-terminal LAGLIDADG-like domain K1728_10145 PF01933 Uncharacterised protein family UPF0052 K1728_10150 PF03668 P-loop ATPase protein family K1728_10160 PF00005 ABC transporter K1728_10160 PF17755 UvrA DNA-binding domain K1728_10160 PF17760 UvrA interaction domain K1728_10165 PF07690 Major Facilitator Superfamily K1728_10175 PF01569 PAP2 superfamily K1728_10190 PF00128 Alpha amylase, catalytic domain K1728_10195 PF00248 Aldo/keto reductase family K1728_10200 PF03167 Uracil DNA glycosylase superfamily K1728_10205 PF00205 Thiamine pyrophosphate enzyme, central domain K1728_10205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K1728_10205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K1728_10215 PF07690 Major Facilitator Superfamily K1728_10220 PF01473 Putative cell wall binding repeat K1728_10220 PF02324 Glycosyl hydrolase family 70 K1728_10230 PF00380 Ribosomal protein S9/S16 K1728_10235 PF00572 Ribosomal protein L13 K1728_10240 PF01416 tRNA pseudouridine synthase K1728_10245 PF02361 Cobalt transport protein K1728_10250 PF00005 ABC transporter K1728_10255 PF00005 ABC transporter K1728_10265 PF07992 Pyridine nucleotide-disulphide oxidoreductase K1728_10270 PF01297 Zinc-uptake complex component A periplasmic K1728_10275 PF00950 ABC 3 transport family K1728_10280 PF00005 ABC transporter K1728_10290 PF00542 Ribosomal protein L7/L12 C-terminal domain K1728_10290 PF16320 Ribosomal protein L7/L12 dimerisation domain K1728_10295 PF00466 Ribosomal protein L10 K1728_10300 PF00687 Ribosomal protein L1p/L10e family K1728_10305 PF03946 Ribosomal protein L11, N-terminal domain K1728_10305 PF00298 Ribosomal protein L11, RNA binding domain K1728_10310 PF00467 KOW motif K1728_10310 PF02357 Transcription termination factor nusG K1728_10315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K1728_10320 PF00471 Ribosomal protein L33 K1728_10330 PF00588 SpoU rRNA Methylase family K1728_10330 PF08032 RNA 2'-O ribose methyltransferase substrate binding K1728_10335 PF00636 Ribonuclease III domain K1728_10340 PF02664 S-Ribosylhomocysteinase (LuxS) K1728_10345 PF03180 NLPA lipoprotein K1728_10350 PF01717 Cobalamin-independent synthase, Catalytic domain K1728_10355 PF00106 short chain dehydrogenase K1728_10360 PF01406 tRNA synthetases class I (C) catalytic domain K1728_10360 PF09190 DALR domain K1728_10375 PF17975 Ribonucleotide reductase alpha domain K1728_10380 PF02540 NAD synthase K1728_10385 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family K1728_10385 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain K1728_10385 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain K1728_10395 PF03180 NLPA lipoprotein K1728_10400 PF09383 NIL domain K1728_10400 PF00005 ABC transporter K1728_10405 PF00528 Binding-protein-dependent transport system inner membrane component K1728_10430 PF01196 Ribosomal protein L17 K1728_10435 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K1728_10435 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K1728_10435 PF01000 RNA polymerase Rpb3/RpoA insert domain K1728_10440 PF00411 Ribosomal protein S11 K1728_10445 PF00416 Ribosomal protein S13/S18 K1728_10450 PF00444 Ribosomal protein L36 K1728_10455 PF01176 Translation initiation factor 1A / IF-1 K1728_10460 PF05191 Adenylate kinase, active site lid K1728_10465 PF00344 SecY translocase K1728_10470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K1728_10475 PF00327 Ribosomal protein L30p/L7e K1728_10480 PF00333 Ribosomal protein S5, N-terminal domain K1728_10480 PF03719 Ribosomal protein S5, C-terminal domain K1728_10485 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K1728_10490 PF00347 Ribosomal protein L6 K1728_10495 PF00410 Ribosomal protein S8 K1728_10500 PF00281 Ribosomal protein L5 K1728_10500 PF00673 ribosomal L5P family C-terminus K1728_10505 PF00467 KOW motif K1728_10505 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K1728_10510 PF00238 Ribosomal protein L14p/L23e K1728_10515 PF00366 Ribosomal protein S17 K1728_10520 PF00831 Ribosomal L29 protein K1728_10525 PF00252 Ribosomal protein L16p/L10e K1728_10530 PF00189 Ribosomal protein S3, C-terminal domain K1728_10530 PF07650 KH domain K1728_10535 PF00237 Ribosomal protein L22p/L17e K1728_10540 PF00203 Ribosomal protein S19 K1728_10545 PF03947 Ribosomal Proteins L2, C-terminal domain K1728_10545 PF00181 Ribosomal Proteins L2, RNA binding domain K1728_10550 PF00276 Ribosomal protein L23 K1728_10555 PF00573 Ribosomal protein L4/L1 family K1728_10560 PF00297 Ribosomal protein L3 K1728_10565 PF00338 Ribosomal protein S10p/S20e K1728_10570 PF00348 Polyprenyl synthetase K1728_10575 PF00814 Glycoprotease family K1728_10590 PF00814 Glycoprotease family K1728_10605 PF16363 GDP-mannose 4,6 dehydratase K1728_10615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K1728_10625 PF06153 Cyclic-di-AMP receptor K1728_10630 PF02223 Thymidylate kinase K1728_10645 PF13662 Toprim domain K1728_10645 PF02132 RecR protein K1728_10650 PF02575 YbaB/EbfC DNA-binding family K1728_10655 PF12169 DNA polymerase III subunits gamma and tau domain III K1728_10665 PF14437 MafB19-like deaminase K1728_10670 PF05175 Methyltransferase small domain K1728_10675 PF03641 Possible lysine decarboxylase K1728_10680 PF07690 Major Facilitator Superfamily K1728_10715 PF08241 Methyltransferase domain K1728_10720 PF00440 Bacterial regulatory proteins, tetR family K1728_10735 PF00465 Iron-containing alcohol dehydrogenase K1728_10740 PF00623 RNA polymerase Rpb1, domain 2 K1728_10740 PF04983 RNA polymerase Rpb1, domain 3 K1728_10740 PF04997 RNA polymerase Rpb1, domain 1 K1728_10740 PF04998 RNA polymerase Rpb1, domain 5 K1728_10740 PF05000 RNA polymerase Rpb1, domain 4 K1728_10745 PF04560 RNA polymerase Rpb2, domain 7 K1728_10745 PF00562 RNA polymerase Rpb2, domain 6 K1728_10745 PF10385 RNA polymerase beta subunit external 1 domain K1728_10745 PF04565 RNA polymerase Rpb2, domain 3 K1728_10745 PF04561 RNA polymerase Rpb2, domain 2 K1728_10745 PF04563 RNA polymerase beta subunit K1728_10750 PF17871 AAA lid domain K1728_10750 PF07724 AAA domain (Cdc48 subfamily) K1728_10750 PF00004 ATPase family associated with various cellular activities (AAA) K1728_10750 PF02861 Clp amino terminal domain, pathogenicity island component K1728_10750 PF10431 C-terminal, D2-small domain, of ClpB protein K1728_10755 PF05848 CtsR N-terminal HTH domain K1728_10755 PF17727 CtsR C-terminal dimerization domain K1728_10780 PF07943 Penicillin-binding protein 5, C-terminal domain K1728_10780 PF00768 D-alanyl-D-alanine carboxypeptidase K1728_10785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K1728_10785 PF02403 Seryl-tRNA synthetase N-terminal domain K1728_10790 PF01712 Deoxynucleoside kinase K1728_10795 PF02557 D-alanyl-D-alanine carboxypeptidase K1728_10800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K1728_10800 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K1728_10805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K1728_10805 PF02874 ATP synthase alpha/beta family, beta-barrel domain K1728_10810 PF00231 ATP synthase K1728_10815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K1728_10815 PF00306 ATP synthase alpha/beta chain, C terminal domain K1728_10815 PF02874 ATP synthase alpha/beta family, beta-barrel domain K1728_10820 PF00213 ATP synthase delta (OSCP) subunit K1728_10825 PF00430 ATP synthase B/B' CF(0) K1728_10830 PF00137 ATP synthase subunit C K1728_10835 PF00119 ATP synthase A chain K1728_10840 PF00860 Permease family K1728_10845 PF11066 Protein of unknown function (DUF2867) K1728_10845 PF13460 NAD(P)H-binding K1728_10855 PF00464 Serine hydroxymethyltransferase K1728_10860 PF03481 Putative GTP-binding controlling metal-binding K1728_10860 PF01300 Telomere recombination K1728_10865 PF05175 Methyltransferase small domain K1728_10865 PF17827 PrmC N-terminal domain K1728_10870 PF03462 PCRF domain K1728_10870 PF00472 RF-1 domain K1728_10875 PF00265 Thymidine kinase K1728_10885 PF07685 CobB/CobQ-like glutamine amidotransferase domain K1728_10890 PF08353 Domain of unknown function (DUF1727) K1728_10890 PF08245 Mur ligase middle domain K1728_10905 PF01238 Phosphomannose isomerase type I K1728_10930 PF00005 ABC transporter K1728_10930 PF00664 ABC transporter transmembrane region K1728_10935 PF00005 ABC transporter K1728_10935 PF00664 ABC transporter transmembrane region K1728_10945 PF01926 50S ribosome-binding GTPase K1728_10945 PF13167 GTP-binding GTPase N-terminal K1728_10945 PF16360 GTP-binding GTPase Middle Region K1728_10950 PF00300 Histidine phosphatase superfamily (branch 1) K1728_10970 PF00005 ABC transporter K1728_10975 PF03372 Endonuclease/Exonuclease/phosphatase family K1728_10990 PF00171 Aldehyde dehydrogenase family K1728_10990 PF00465 Iron-containing alcohol dehydrogenase K1728_11000 PF01431 Peptidase family M13 K1728_11000 PF05649 Peptidase family M13 K1728_11035 PF04230 Polysaccharide pyruvyl transferase K1728_11040 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K1728_11040 PF09363 XFP C-terminal domain K1728_11040 PF09364 XFP N-terminal domain K1728_11045 PF00392 Bacterial regulatory proteins, gntR family K1728_11045 PF07702 UTRA domain K1728_11070 PF07690 Major Facilitator Superfamily K1728_11075 PF01966 HD domain K1728_11090 PF00083 Sugar (and other) transporter K1728_11110 PF00528 Binding-protein-dependent transport system inner membrane component K1728_11115 PF00005 ABC transporter K1728_11120 PF00083 Sugar (and other) transporter K1728_11145 PF01554 MatE K1728_11150 PF00005 ABC transporter K1728_11150 PF12848 ABC transporter K1728_11160 PF00005 ABC transporter K1728_11170 PF01047 MarR family K1728_11175 PF01757 Acyltransferase family K1728_11180 PF00465 Iron-containing alcohol dehydrogenase K1728_11185 PF10263 SprT-like family K1728_11220 PF07690 Major Facilitator Superfamily K1728_11225 PF00854 POT family K1728_11230 PF00149 Calcineurin-like phosphoesterase K1728_11275 PF00768 D-alanyl-D-alanine carboxypeptidase K1728_11275 PF07943 Penicillin-binding protein 5, C-terminal domain K1728_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_11280 PF00512 His Kinase A (phospho-acceptor) domain K1728_11285 PF00072 Response regulator receiver domain K1728_11285 PF00486 Transcriptional regulatory protein, C terminal K1728_11295 PF01926 50S ribosome-binding GTPase K1728_11295 PF06071 Protein of unknown function (DUF933) K1728_11300 PF06107 Bacterial protein of unknown function (DUF951) K1728_11305 PF17762 HTH domain found in ParB protein K1728_11305 PF02195 ParB-like nuclease domain K1728_11310 PF13614 AAA domain K1728_11315 PF02527 rRNA small subunit methyltransferase G K1728_11320 PF01156 Inosine-uridine preferring nucleoside hydrolase K1728_11325 PF00730 HhH-GPD superfamily base excision DNA repair protein K1728_11325 PF14815 NUDIX domain K1728_11330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K1728_11350 PF17853 GGDEF-like domain K1728_11350 PF12833 Helix-turn-helix domain K1728_11355 PF13802 Galactose mutarotase-like K1728_11355 PF01055 Glycosyl hydrolases family 31 K1728_11365 PF01270 Glycosyl hydrolases family 8 K1728_11370 PF00512 His Kinase A (phospho-acceptor) domain K1728_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K1728_11375 PF00486 Transcriptional regulatory protein, C terminal K1728_11375 PF00072 Response regulator receiver domain K1728_11380 PF03741 Integral membrane protein TerC family K1728_11390 PF13193 AMP-binding enzyme C-terminal domain K1728_11390 PF00501 AMP-binding enzyme K1728_11395 PF00378 Enoyl-CoA hydratase/isomerase K1728_11400 PF03061 Thioesterase superfamily K1728_11405 PF00857 Isochorismatase family K1728_11410 PF01209 ubiE/COQ5 methyltransferase family K1728_11420 PF02229 Transcriptional Coactivator p15 (PC4) K1728_11425 PF00710 Asparaginase, N-terminal K1728_11425 PF17763 Glutaminase/Asparaginase C-terminal domain K1728_11430 PF13520 Amino acid permease K1728_11435 PF00324 Amino acid permease K1728_11465 PF13520 Amino acid permease K1728_11470 PF06800 Sugar transport protein K1728_11475 PF07690 Major Facilitator Superfamily K1728_11485 PF04608 Phosphatidylglycerophosphatase A K1728_11490 PF08240 Alcohol dehydrogenase GroES-like domain K1728_11490 PF00107 Zinc-binding dehydrogenase K1728_11495 PF00230 Major intrinsic protein K1728_11505 PF03853 YjeF-related protein N-terminus K1728_11515 PF11799 impB/mucB/samB family C-terminal domain K1728_11515 PF00817 impB/mucB/samB family K1728_11515 PF11798 IMS family HHH motif K1728_11525 PF00480 ROK family K1728_11530 PF06800 Sugar transport protein K1728_11540 PF13520 Amino acid permease K1728_11545 PF01979 Amidohydrolase family K1728_11565 PF03601 Conserved hypothetical protein 698 K1728_11575 PF01207 Dihydrouridine synthase (Dus) K1728_11600 PF00324 Amino acid permease K1728_11610 PF18419 ATP-grasp-like domain K1728_11610 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K1728_11610 PF04262 Glutamate-cysteine ligase K1728_11625 PF01638 HxlR-like helix-turn-helix K1728_11630 PF01594 AI-2E family transporter K1728_11640 PF03706 Lysylphosphatidylglycerol synthase TM region K1728_11640 PF09924 Uncharacterised conserved protein (DUF2156) K1728_11650 PF00708 Acylphosphatase K1728_11655 PF00497 Bacterial extracellular solute-binding proteins, family 3 K1728_11660 PF00497 Bacterial extracellular solute-binding proteins, family 3 K1728_11665 PF00528 Binding-protein-dependent transport system inner membrane component K1728_11670 PF00005 ABC transporter K1728_11675 PF03649 Uncharacterised protein family (UPF0014) K1728_11680 PF00005 ABC transporter K1728_11690 PF00248 Aldo/keto reductase family K1728_11700 PF00664 ABC transporter transmembrane region K1728_11700 PF00005 ABC transporter K1728_11705 PF01047 MarR family K1728_11710 PF00293 NUDIX domain K1728_11710 PF13344 Haloacid dehalogenase-like hydrolase K1728_11725 PF00892 EamA-like transporter family K1728_11735 PF17755 UvrA DNA-binding domain K1728_11735 PF00005 ABC transporter K1728_11735 PF17760 UvrA interaction domain K1728_11740 PF01938 TRAM domain K1728_11740 PF05958 tRNA (Uracil-5-)-methyltransferase K1728_11760 PF13520 Amino acid permease K1728_11770 PF00912 Transglycosylase K1728_11770 PF00905 Penicillin binding protein transpeptidase domain K1728_11775 PF02608 ABC transporter substrate-binding protein PnrA-like K1728_11780 PF00958 GMP synthase C terminal domain K1728_11780 PF02540 NAD synthase K1728_11780 PF00117 Glutamine amidotransferase class-I K1728_11790 PF00005 ABC transporter K1728_11790 PF13732 Domain of unknown function (DUF4162) K1728_11805 PF07676 WD40-like Beta Propeller Repeat K1728_11805 PF00326 Prolyl oligopeptidase family K1728_11810 PF03180 NLPA lipoprotein K1728_11820 PF00528 Binding-protein-dependent transport system inner membrane component K1728_11825 PF00571 CBS domain K1728_11825 PF00005 ABC transporter K1728_11830 PF00857 Isochorismatase family K1728_11840 PF01161 Phosphatidylethanolamine-binding protein K1728_11860 PF00121 Triosephosphate isomerase K1728_11870 PF07690 Major Facilitator Superfamily K1728_11875 PF01047 MarR family K1728_11880 PF03358 NADPH-dependent FMN reductase K1728_11885 PF00860 Permease family K1728_11910 PF00075 RNase H K1728_11925 PF02386 Cation transport protein K1728_11930 PF02590 Predicted SPOUT methyltransferase K1728_11975 PF00324 Amino acid permease K1728_11980 PF02254 TrkA-N domain K1728_11980 PF02080 TrkA-C domain K1728_12000 PF01497 Periplasmic binding protein K1728_12005 PF01032 FecCD transport family K1728_12010 PF00005 ABC transporter K1728_12015 PF10502 Signal peptidase, peptidase S26 K1728_12020 PF02096 60Kd inner membrane protein K1728_12025 PF00825 Ribonuclease P K1728_12030 PF00468 Ribosomal protein L34 K1728_12035 PF13732 Domain of unknown function (DUF4162) K1728_12035 PF00005 ABC transporter K1728_12070 PF04138 GtrA-like protein K1728_12090 PF13649 Methyltransferase domain K1728_12110 PF00202 Aminotransferase class-III K1728_12115 PF00005 ABC transporter K1728_12115 PF13732 Domain of unknown function (DUF4162) K1728_12145 PF04138 GtrA-like protein K1728_12160 PF13649 Methyltransferase domain K1728_12175 PF00202 Aminotransferase class-III