locus-tag class description C6P08_00005 PF00308 Bacterial dnaA protein C6P08_00005 PF08299 Bacterial dnaA protein helix-turn-helix C6P08_00005 PF11638 DnaA N-terminal domain C6P08_00010 PF00468 Ribosomal protein L34 C6P08_00015 PF00825 Ribonuclease P C6P08_00020 PF02096 60Kd inner membrane protein C6P08_00025 PF10502 Signal peptidase, peptidase S26 C6P08_00030 PF00005 ABC transporter C6P08_00035 PF01032 FecCD transport family C6P08_00055 PF02080 TrkA-C domain C6P08_00055 PF02254 TrkA-N domain C6P08_00060 PF00324 Amino acid permease C6P08_00100 PF02590 Predicted SPOUT methyltransferase C6P08_00105 PF02386 Cation transport protein C6P08_00120 PF00075 RNase H C6P08_00145 PF00860 Permease family C6P08_00150 PF03358 NADPH-dependent FMN reductase C6P08_00155 PF01047 MarR family C6P08_00160 PF07690 Major Facilitator Superfamily C6P08_00170 PF00121 Triosephosphate isomerase C6P08_00190 PF01161 Phosphatidylethanolamine-binding protein C6P08_00200 PF00857 Isochorismatase family C6P08_00205 PF00571 CBS domain C6P08_00205 PF00005 ABC transporter C6P08_00210 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_00220 PF03180 NLPA lipoprotein C6P08_00225 PF07676 WD40-like Beta Propeller Repeat C6P08_00225 PF00326 Prolyl oligopeptidase family C6P08_00235 PF13732 Domain of unknown function (DUF4162) C6P08_00235 PF00005 ABC transporter C6P08_00245 PF02540 NAD synthase C6P08_00245 PF00958 GMP synthase C terminal domain C6P08_00245 PF00117 Glutamine amidotransferase class-I C6P08_00250 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_00255 PF00764 Arginosuccinate synthase C6P08_00260 PF14698 Argininosuccinate lyase C-terminal C6P08_00260 PF00206 Lyase C6P08_00265 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6P08_00265 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6P08_00270 PF01960 ArgJ family C6P08_00275 PF00696 Amino acid kinase family C6P08_00280 PF00202 Aminotransferase class-III C6P08_00285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C6P08_00285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C6P08_00290 PF00117 Glutamine amidotransferase class-I C6P08_00290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C6P08_00300 PF00912 Transglycosylase C6P08_00300 PF00905 Penicillin binding protein transpeptidase domain C6P08_00310 PF13520 Amino acid permease C6P08_00330 PF01938 TRAM domain C6P08_00330 PF05958 tRNA (Uracil-5-)-methyltransferase C6P08_00335 PF00005 ABC transporter C6P08_00335 PF17755 UvrA DNA-binding domain C6P08_00335 PF17760 UvrA interaction domain C6P08_00345 PF00892 EamA-like transporter family C6P08_00360 PF00293 NUDIX domain C6P08_00360 PF13344 Haloacid dehalogenase-like hydrolase C6P08_00365 PF01047 MarR family C6P08_00370 PF00005 ABC transporter C6P08_00370 PF00664 ABC transporter transmembrane region C6P08_00380 PF00248 Aldo/keto reductase family C6P08_00390 PF00005 ABC transporter C6P08_00395 PF03649 Uncharacterised protein family (UPF0014) C6P08_00400 PF00005 ABC transporter C6P08_00405 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_00410 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6P08_00415 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6P08_00420 PF00708 Acylphosphatase C6P08_00430 PF03706 Lysylphosphatidylglycerol synthase TM region C6P08_00430 PF09924 Uncharacterised conserved protein (DUF2156) C6P08_00440 PF01594 AI-2E family transporter C6P08_00445 PF01638 HxlR-like helix-turn-helix C6P08_00460 PF02655 ATP-grasp domain C6P08_00460 PF18419 ATP-grasp-like domain C6P08_00460 PF04262 Glutamate-cysteine ligase C6P08_00470 PF00324 Amino acid permease C6P08_00495 PF01207 Dihydrouridine synthase (Dus) C6P08_00505 PF03601 Conserved hypothetical protein 698 C6P08_00525 PF01979 Amidohydrolase family C6P08_00530 PF13520 Amino acid permease C6P08_00540 PF06800 Sugar transport protein C6P08_00545 PF00480 ROK family C6P08_00555 PF11798 IMS family HHH motif C6P08_00555 PF11799 impB/mucB/samB family C-terminal domain C6P08_00555 PF00817 impB/mucB/samB family C6P08_00565 PF03853 YjeF-related protein N-terminus C6P08_00575 PF00230 Major intrinsic protein C6P08_00580 PF00107 Zinc-binding dehydrogenase C6P08_00580 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_00585 PF04608 Phosphatidylglycerophosphatase A C6P08_00590 PF07690 Major Facilitator Superfamily C6P08_00595 PF06800 Sugar transport protein C6P08_00600 PF13520 Amino acid permease C6P08_00630 PF00324 Amino acid permease C6P08_00635 PF13520 Amino acid permease C6P08_00640 PF17763 Glutaminase/Asparaginase C-terminal domain C6P08_00640 PF00710 Asparaginase, N-terminal C6P08_00645 PF02229 Transcriptional Coactivator p15 (PC4) C6P08_00655 PF01209 ubiE/COQ5 methyltransferase family C6P08_00660 PF00857 Isochorismatase family C6P08_00665 PF03061 Thioesterase superfamily C6P08_00670 PF00378 Enoyl-CoA hydratase/isomerase C6P08_00675 PF00501 AMP-binding enzyme C6P08_00675 PF13193 AMP-binding enzyme C-terminal domain C6P08_00690 PF03741 Integral membrane protein TerC family C6P08_00695 PF00486 Transcriptional regulatory protein, C terminal C6P08_00695 PF00072 Response regulator receiver domain C6P08_00700 PF00512 His Kinase A (phospho-acceptor) domain C6P08_00700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_00705 PF01270 Glycosyl hydrolases family 8 C6P08_00715 PF01055 Glycosyl hydrolases family 31 C6P08_00715 PF13802 Galactose mutarotase-like C6P08_00720 PF12833 Helix-turn-helix domain C6P08_00720 PF17853 GGDEF-like domain C6P08_00735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C6P08_00740 PF00730 HhH-GPD superfamily base excision DNA repair protein C6P08_00740 PF14815 NUDIX domain C6P08_00745 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_00750 PF02527 rRNA small subunit methyltransferase G C6P08_00755 PF13614 AAA domain C6P08_00760 PF17762 HTH domain found in ParB protein C6P08_00760 PF02195 ParB-like nuclease domain C6P08_00765 PF06107 Bacterial protein of unknown function (DUF951) C6P08_00770 PF01926 50S ribosome-binding GTPase C6P08_00770 PF06071 Protein of unknown function (DUF933) C6P08_00780 PF00072 Response regulator receiver domain C6P08_00780 PF00486 Transcriptional regulatory protein, C terminal C6P08_00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_00785 PF00512 His Kinase A (phospho-acceptor) domain C6P08_00790 PF07943 Penicillin-binding protein 5, C-terminal domain C6P08_00790 PF00768 D-alanyl-D-alanine carboxypeptidase C6P08_00840 PF00149 Calcineurin-like phosphoesterase C6P08_00845 PF00854 POT family C6P08_00850 PF07690 Major Facilitator Superfamily C6P08_00885 PF10263 SprT-like family C6P08_00890 PF00465 Iron-containing alcohol dehydrogenase C6P08_00895 PF01757 Acyltransferase family C6P08_00900 PF01047 MarR family C6P08_00910 PF00005 ABC transporter C6P08_00920 PF00005 ABC transporter C6P08_00920 PF12848 ABC transporter C6P08_00925 PF01554 MatE C6P08_00950 PF00083 Sugar (and other) transporter C6P08_00955 PF00005 ABC transporter C6P08_00980 PF00083 Sugar (and other) transporter C6P08_00995 PF01966 HD domain C6P08_01000 PF07690 Major Facilitator Superfamily C6P08_01005 PF07702 UTRA domain C6P08_01005 PF00392 Bacterial regulatory proteins, gntR family C6P08_01010 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase C6P08_01010 PF09364 XFP N-terminal domain C6P08_01010 PF09363 XFP C-terminal domain C6P08_01025 PF04230 Polysaccharide pyruvyl transferase C6P08_01065 PF05649 Peptidase family M13 C6P08_01065 PF01431 Peptidase family M13 C6P08_01075 PF02378 Phosphotransferase system, EIIC C6P08_01075 PF00367 phosphotransferase system, EIIB C6P08_01075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_01080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_01080 PF00367 phosphotransferase system, EIIB C6P08_01080 PF02378 Phosphotransferase system, EIIC C6P08_01085 PF00128 Alpha amylase, catalytic domain C6P08_01085 PF16657 Maltogenic Amylase, C-terminal domain C6P08_01090 PF00465 Iron-containing alcohol dehydrogenase C6P08_01090 PF00171 Aldehyde dehydrogenase family C6P08_01100 PF03372 Endonuclease/Exonuclease/phosphatase family C6P08_01105 PF00005 ABC transporter C6P08_01125 PF00300 Histidine phosphatase superfamily (branch 1) C6P08_01130 PF01926 50S ribosome-binding GTPase C6P08_01130 PF16360 GTP-binding GTPase Middle Region C6P08_01130 PF13167 GTP-binding GTPase N-terminal C6P08_01140 PF00664 ABC transporter transmembrane region C6P08_01140 PF00005 ABC transporter C6P08_01145 PF00005 ABC transporter C6P08_01145 PF00664 ABC transporter transmembrane region C6P08_01175 PF01238 Phosphomannose isomerase type I C6P08_01185 PF08245 Mur ligase middle domain C6P08_01185 PF08353 Domain of unknown function (DUF1727) C6P08_01190 PF07685 CobB/CobQ-like glutamine amidotransferase domain C6P08_01210 PF00265 Thymidine kinase C6P08_01215 PF03462 PCRF domain C6P08_01215 PF00472 RF-1 domain C6P08_01220 PF05175 Methyltransferase small domain C6P08_01220 PF17827 PrmC N-terminal domain C6P08_01225 PF01300 Telomere recombination C6P08_01225 PF03481 Putative GTP-binding controlling metal-binding C6P08_01230 PF00464 Serine hydroxymethyltransferase C6P08_01240 PF13460 NAD(P)H-binding C6P08_01240 PF11066 Protein of unknown function (DUF2867) C6P08_01245 PF00860 Permease family C6P08_01250 PF00119 ATP synthase A chain C6P08_01255 PF00137 ATP synthase subunit C C6P08_01260 PF00430 ATP synthase B/B' CF(0) C6P08_01265 PF00213 ATP synthase delta (OSCP) subunit C6P08_01270 PF00306 ATP synthase alpha/beta chain, C terminal domain C6P08_01270 PF02874 ATP synthase alpha/beta family, beta-barrel domain C6P08_01270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C6P08_01275 PF00231 ATP synthase C6P08_01280 PF02874 ATP synthase alpha/beta family, beta-barrel domain C6P08_01280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C6P08_01285 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C6P08_01285 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C6P08_01290 PF02557 D-alanyl-D-alanine carboxypeptidase C6P08_01295 PF01712 Deoxynucleoside kinase C6P08_01300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6P08_01300 PF02403 Seryl-tRNA synthetase N-terminal domain C6P08_01310 PF00768 D-alanyl-D-alanine carboxypeptidase C6P08_01310 PF07943 Penicillin-binding protein 5, C-terminal domain C6P08_01335 PF05848 CtsR N-terminal HTH domain C6P08_01335 PF17727 CtsR C-terminal dimerization domain C6P08_01340 PF10431 C-terminal, D2-small domain, of ClpB protein C6P08_01340 PF07724 AAA domain (Cdc48 subfamily) C6P08_01340 PF02861 Clp amino terminal domain, pathogenicity island component C6P08_01340 PF17871 AAA lid domain C6P08_01340 PF00004 ATPase family associated with various cellular activities (AAA) C6P08_01345 PF04563 RNA polymerase beta subunit C6P08_01345 PF04561 RNA polymerase Rpb2, domain 2 C6P08_01345 PF04565 RNA polymerase Rpb2, domain 3 C6P08_01345 PF10385 RNA polymerase beta subunit external 1 domain C6P08_01345 PF04560 RNA polymerase Rpb2, domain 7 C6P08_01345 PF00562 RNA polymerase Rpb2, domain 6 C6P08_01350 PF00623 RNA polymerase Rpb1, domain 2 C6P08_01350 PF05000 RNA polymerase Rpb1, domain 4 C6P08_01350 PF04997 RNA polymerase Rpb1, domain 1 C6P08_01350 PF04983 RNA polymerase Rpb1, domain 3 C6P08_01350 PF04998 RNA polymerase Rpb1, domain 5 C6P08_01355 PF00465 Iron-containing alcohol dehydrogenase C6P08_01365 PF08241 Methyltransferase domain C6P08_01385 PF13173 AAA domain C6P08_01385 PF13635 Domain of unknown function (DUF4143) C6P08_01405 PF07690 Major Facilitator Superfamily C6P08_01410 PF03641 Possible lysine decarboxylase C6P08_01415 PF05175 Methyltransferase small domain C6P08_01420 PF14437 MafB19-like deaminase C6P08_01430 PF12169 DNA polymerase III subunits gamma and tau domain III C6P08_01435 PF02575 YbaB/EbfC DNA-binding family C6P08_01440 PF02132 RecR protein C6P08_01440 PF13662 Toprim domain C6P08_01455 PF02223 Thymidylate kinase C6P08_01460 PF06153 Cyclic-di-AMP receptor C6P08_01470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C6P08_01480 PF16363 GDP-mannose 4,6 dehydratase C6P08_01485 PF00814 Glycoprotease family C6P08_01500 PF00814 Glycoprotease family C6P08_01505 PF00348 Polyprenyl synthetase C6P08_01510 PF00338 Ribosomal protein S10p/S20e C6P08_01515 PF00297 Ribosomal protein L3 C6P08_01520 PF00573 Ribosomal protein L4/L1 family C6P08_01525 PF00276 Ribosomal protein L23 C6P08_01530 PF03947 Ribosomal Proteins L2, C-terminal domain C6P08_01530 PF00181 Ribosomal Proteins L2, RNA binding domain C6P08_01535 PF00203 Ribosomal protein S19 C6P08_01540 PF00237 Ribosomal protein L22p/L17e C6P08_01545 PF07650 KH domain C6P08_01545 PF00189 Ribosomal protein S3, C-terminal domain C6P08_01550 PF00252 Ribosomal protein L16p/L10e C6P08_01555 PF00831 Ribosomal L29 protein C6P08_01560 PF00366 Ribosomal protein S17 C6P08_01565 PF00238 Ribosomal protein L14p/L23e C6P08_01570 PF00467 KOW motif C6P08_01570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C6P08_01575 PF00673 ribosomal L5P family C-terminus C6P08_01575 PF00281 Ribosomal protein L5 C6P08_01580 PF00410 Ribosomal protein S8 C6P08_01585 PF00347 Ribosomal protein L6 C6P08_01590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C6P08_01595 PF00333 Ribosomal protein S5, N-terminal domain C6P08_01595 PF03719 Ribosomal protein S5, C-terminal domain C6P08_01600 PF00327 Ribosomal protein L30p/L7e C6P08_01605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C6P08_01610 PF00344 SecY translocase C6P08_01615 PF05191 Adenylate kinase, active site lid C6P08_01620 PF01176 Translation initiation factor 1A / IF-1 C6P08_01625 PF00444 Ribosomal protein L36 C6P08_01630 PF00416 Ribosomal protein S13/S18 C6P08_01635 PF00411 Ribosomal protein S11 C6P08_01640 PF01000 RNA polymerase Rpb3/RpoA insert domain C6P08_01640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C6P08_01640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C6P08_01645 PF01196 Ribosomal protein L17 C6P08_01670 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_01675 PF09383 NIL domain C6P08_01675 PF00005 ABC transporter C6P08_01680 PF03180 NLPA lipoprotein C6P08_01690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C6P08_01690 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C6P08_01690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C6P08_01695 PF02540 NAD synthase C6P08_01700 PF17975 Ribonucleotide reductase alpha domain C6P08_01715 PF01406 tRNA synthetases class I (C) catalytic domain C6P08_01715 PF09190 DALR domain C6P08_01720 PF00106 short chain dehydrogenase C6P08_01725 PF01717 Cobalamin-independent synthase, Catalytic domain C6P08_01730 PF03180 NLPA lipoprotein C6P08_01735 PF02664 S-Ribosylhomocysteinase (LuxS) C6P08_01740 PF00636 Ribonuclease III domain C6P08_01745 PF08032 RNA 2'-O ribose methyltransferase substrate binding C6P08_01745 PF00588 SpoU rRNA Methylase family C6P08_01755 PF00471 Ribosomal protein L33 C6P08_01760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C6P08_01765 PF00467 KOW motif C6P08_01765 PF02357 Transcription termination factor nusG C6P08_01770 PF03946 Ribosomal protein L11, N-terminal domain C6P08_01770 PF00298 Ribosomal protein L11, RNA binding domain C6P08_01775 PF00687 Ribosomal protein L1p/L10e family C6P08_01780 PF00466 Ribosomal protein L10 C6P08_01785 PF00542 Ribosomal protein L7/L12 C-terminal domain C6P08_01785 PF16320 Ribosomal protein L7/L12 dimerisation domain C6P08_01795 PF00005 ABC transporter C6P08_01800 PF00950 ABC 3 transport family C6P08_01805 PF01297 Zinc-uptake complex component A periplasmic C6P08_01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_01820 PF00005 ABC transporter C6P08_01825 PF00005 ABC transporter C6P08_01830 PF02361 Cobalt transport protein C6P08_01835 PF01416 tRNA pseudouridine synthase C6P08_01840 PF00572 Ribosomal protein L13 C6P08_01845 PF00380 Ribosomal protein S9/S16 C6P08_01855 PF01473 Putative cell wall binding repeat C6P08_01855 PF02324 Glycosyl hydrolase family 70 C6P08_01860 PF07690 Major Facilitator Superfamily C6P08_01870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6P08_01870 PF00205 Thiamine pyrophosphate enzyme, central domain C6P08_01870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6P08_01875 PF03167 Uracil DNA glycosylase superfamily C6P08_01880 PF00248 Aldo/keto reductase family C6P08_01895 PF01569 PAP2 superfamily C6P08_01905 PF07690 Major Facilitator Superfamily C6P08_01910 PF00005 ABC transporter C6P08_01910 PF17760 UvrA interaction domain C6P08_01910 PF17755 UvrA DNA-binding domain C6P08_01920 PF00665 Integrase core domain C6P08_01920 PF13276 HTH-like domain C6P08_01920 PF13333 Integrase core domain C6P08_01930 PF03668 P-loop ATPase protein family C6P08_01935 PF01933 Uncharacterised protein family UPF0052 C6P08_01940 PF02650 WhiA C-terminal HTH domain C6P08_01940 PF14527 WhiA LAGLIDADG-like domain C6P08_01940 PF10298 WhiA N-terminal LAGLIDADG-like domain C6P08_01945 PF00574 Clp protease C6P08_01950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6P08_01950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6P08_01960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_01960 PF00367 phosphotransferase system, EIIB C6P08_01960 PF02378 Phosphotransferase system, EIIC C6P08_01965 PF01783 Ribosomal L32p protein family C6P08_01970 PF01566 Natural resistance-associated macrophage protein C6P08_01990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6P08_02000 PF00535 Glycosyl transferase family 2 C6P08_02015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C6P08_02015 PF00056 lactate/malate dehydrogenase, NAD binding domain C6P08_02020 PF00205 Thiamine pyrophosphate enzyme, central domain C6P08_02020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6P08_02020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6P08_02025 PF03306 Alpha-acetolactate decarboxylase C6P08_02030 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_02030 PF00107 Zinc-binding dehydrogenase C6P08_02035 PF01476 LysM domain C6P08_02035 PF00877 NlpC/P60 family C6P08_02050 PF00692 dUTPase C6P08_02055 PF18073 Rubredoxin metal binding domain C6P08_02065 PF00749 tRNA synthetases class I (E and Q), catalytic domain C6P08_02075 PF07516 SecA Wing and Scaffold domain C6P08_02075 PF07517 SecA DEAD-like domain C6P08_02075 PF01043 SecA preprotein cross-linking domain C6P08_02080 PF00472 RF-1 domain C6P08_02080 PF03462 PCRF domain C6P08_02085 PF01116 Fructose-bisphosphate aldolase class-II C6P08_02090 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) C6P08_02105 PF02388 FemAB family C6P08_02110 PF00588 SpoU rRNA Methylase family C6P08_02110 PF08032 RNA 2'-O ribose methyltransferase substrate binding C6P08_02130 PF01638 HxlR-like helix-turn-helix C6P08_02135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C6P08_02135 PF01409 tRNA synthetases class II core domain (F) C6P08_02140 PF03484 tRNA synthetase B5 domain C6P08_02140 PF03483 B3/4 domain C6P08_02140 PF03147 Ferredoxin-fold anticodon binding domain C6P08_02140 PF01588 Putative tRNA binding domain C6P08_02140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C6P08_02145 PF02618 YceG-like family C6P08_02150 PF00270 DEAD/DEAH box helicase C6P08_02150 PF00271 Helicase conserved C-terminal domain C6P08_02150 PF09382 RQC domain C6P08_02150 PF16124 RecQ zinc-binding C6P08_02150 PF00570 HRDC domain C6P08_02155 PF01272 Transcription elongation factor, GreA/GreB, C-term C6P08_02155 PF03449 Transcription elongation factor, N-terminal C6P08_02170 PF01812 5-formyltetrahydrofolate cyclo-ligase family C6P08_02175 PF01694 Rhomboid family C6P08_02185 PF00480 ROK family C6P08_02190 PF01476 LysM domain C6P08_02190 PF05257 CHAP domain C6P08_02195 PF01551 Peptidase family M23 C6P08_02195 PF01476 LysM domain C6P08_02200 PF00581 Rhodanese-like domain C6P08_02220 PF13411 MerR HTH family regulatory protein C6P08_02225 PF03951 Glutamine synthetase, beta-Grasp domain C6P08_02225 PF00120 Glutamine synthetase, catalytic domain C6P08_02250 PF00829 Ribosomal prokaryotic L21 protein C6P08_02255 PF01016 Ribosomal L27 protein C6P08_02355 PF00436 Single-strand binding protein family C6P08_02520 PF07691 PA14 domain C6P08_02520 PF14310 Fibronectin type III-like domain C6P08_02520 PF00933 Glycosyl hydrolase family 3 N terminal domain C6P08_02520 PF01915 Glycosyl hydrolase family 3 C-terminal domain C6P08_02535 PF00664 ABC transporter transmembrane region C6P08_02535 PF00005 ABC transporter C6P08_02540 PF00425 chorismate binding enzyme C6P08_02545 PF16582 Middle domain of thiamine pyrophosphate C6P08_02545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6P08_02545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6P08_02550 PF00561 alpha/beta hydrolase fold C6P08_02555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C6P08_02555 PF13378 Enolase C-terminal domain-like C6P08_02560 PF00557 Metallopeptidase family M24 C6P08_02560 PF01321 Creatinase/Prolidase N-terminal domain C6P08_02575 PF02872 5'-nucleotidase, C-terminal domain C6P08_02580 PF06265 Protein of unknown function (DUF1027) C6P08_02585 PF13344 Haloacid dehalogenase-like hydrolase C6P08_02590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_02595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6P08_02595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6P08_02600 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_02605 PF00392 Bacterial regulatory proteins, gntR family C6P08_02605 PF07702 UTRA domain C6P08_02615 PF12849 PBP superfamily domain C6P08_02620 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_02625 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_02630 PF00005 ABC transporter C6P08_02635 PF00005 ABC transporter C6P08_02640 PF01895 PhoU domain C6P08_02645 PF02631 RecX family C6P08_02650 PF04167 Protein of unknown function (DUF402) C6P08_02660 PF16658 Class II release factor RF3, C-terminal domain C6P08_02660 PF00009 Elongation factor Tu GTP binding domain C6P08_02660 PF03144 Elongation factor Tu domain 2 C6P08_02675 PF12002 MgsA AAA+ ATPase C terminal C6P08_02675 PF16193 AAA C-terminal domain C6P08_02675 PF05496 Holliday junction DNA helicase RuvB P-loop domain C6P08_02685 PF00582 Universal stress protein family C6P08_02705 PF03006 Haemolysin-III related C6P08_02720 PF10458 Valyl tRNA synthetase tRNA binding arm C6P08_02720 PF00133 tRNA synthetases class I (I, L, M and V) C6P08_02720 PF08264 Anticodon-binding domain of tRNA C6P08_02725 PF02875 Mur ligase family, glutamate ligase domain C6P08_02725 PF08245 Mur ligase middle domain C6P08_02740 PF00005 ABC transporter C6P08_02740 PF16326 ABC transporter C-terminal domain C6P08_02740 PF12848 ABC transporter C6P08_02745 PF07690 Major Facilitator Superfamily C6P08_02760 PF00166 Chaperonin 10 Kd subunit C6P08_02765 PF00118 TCP-1/cpn60 chaperonin family C6P08_02770 PF13520 Amino acid permease C6P08_02780 PF07478 D-ala D-ala ligase C-terminus C6P08_02780 PF01820 D-ala D-ala ligase N-terminus C6P08_02790 PF01926 50S ribosome-binding GTPase C6P08_02800 PF01467 Cytidylyltransferase-like C6P08_02805 PF01966 HD domain C6P08_02815 PF13649 Methyltransferase domain C6P08_02820 PF05636 HIGH Nucleotidyl Transferase C6P08_02830 PF00488 MutS domain V C6P08_02830 PF05190 MutS family domain IV C6P08_02830 PF05192 MutS domain III C6P08_02830 PF01624 MutS domain I C6P08_02830 PF05188 MutS domain II C6P08_02835 PF08676 MutL C terminal dimerisation domain C6P08_02835 PF01119 DNA mismatch repair protein, C-terminal domain C6P08_02845 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_02850 PF00005 ABC transporter C6P08_02860 PF00501 AMP-binding enzyme C6P08_02860 PF13193 AMP-binding enzyme C-terminal domain C6P08_02885 PF03129 Anticodon binding domain C6P08_02885 PF02824 TGS domain C6P08_02885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6P08_02885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C6P08_02890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C6P08_02895 PF00216 Bacterial DNA-binding protein C6P08_02905 PF12704 MacB-like periplasmic core domain C6P08_02905 PF02687 FtsX-like permease family C6P08_02910 PF00005 ABC transporter C6P08_02925 PF07155 ECF-type riboflavin transporter, S component C6P08_02930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C6P08_02930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C6P08_02935 PF13742 OB-fold nucleic acid binding domain C6P08_02935 PF02601 Exonuclease VII, large subunit C6P08_02940 PF02609 Exonuclease VII small subunit C6P08_02945 PF00348 Polyprenyl synthetase C6P08_02950 PF01728 FtsJ-like methyltransferase C6P08_02950 PF01479 S4 domain C6P08_02955 PF01316 Arginine repressor, DNA binding domain C6P08_02955 PF02863 Arginine repressor, C-terminal domain C6P08_02960 PF13476 AAA domain C6P08_02970 PF00625 Guanylate kinase C6P08_02975 PF01192 RNA polymerase Rpb6 C6P08_02985 PF13333 Integrase core domain C6P08_02985 PF00665 Integrase core domain C6P08_02985 PF13276 HTH-like domain C6P08_02990 PF09335 SNARE associated Golgi protein C6P08_02995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C6P08_03000 PF00575 S1 RNA binding domain C6P08_03110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6P08_03110 PF01842 ACT domain C6P08_03110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6P08_03115 PF12822 ECF transporter, substrate-specific component C6P08_03120 PF01654 Cytochrome bd terminal oxidase subunit I C6P08_03125 PF02322 Cytochrome bd terminal oxidase subunit II C6P08_03130 PF00664 ABC transporter transmembrane region C6P08_03130 PF00005 ABC transporter C6P08_03135 PF00664 ABC transporter transmembrane region C6P08_03135 PF00005 ABC transporter C6P08_03140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C6P08_03140 PF10135 Rod binding protein C6P08_03145 PF02222 ATP-grasp domain C6P08_03145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C6P08_03175 PF00313 'Cold-shock' DNA-binding domain C6P08_03180 PF00293 NUDIX domain C6P08_03190 PF01048 Phosphorylase superfamily C6P08_03195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C6P08_03225 PF07972 NrdI Flavodoxin like C6P08_03230 PF00462 Glutaredoxin C6P08_03235 PF08343 Ribonucleotide reductase N-terminal C6P08_03235 PF00317 Ribonucleotide reductase, all-alpha domain C6P08_03235 PF02867 Ribonucleotide reductase, barrel domain C6P08_03240 PF00268 Ribonucleotide reductase, small chain C6P08_03250 PF02653 Branched-chain amino acid transport system / permease component C6P08_03255 PF00005 ABC transporter C6P08_03260 PF00654 Voltage gated chloride channel C6P08_03265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C6P08_03270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C6P08_03275 PF02645 Uncharacterised protein, DegV family COG1307 C6P08_03280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_03280 PF00367 phosphotransferase system, EIIB C6P08_03280 PF02378 Phosphotransferase system, EIIC C6P08_03295 PF04002 RadC-like JAB domain C6P08_03305 PF04085 rod shape-determining protein MreC C6P08_03310 PF00194 Eukaryotic-type carbonic anhydrase C6P08_03320 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_03325 PF00005 ABC transporter C6P08_03335 PF00925 GTP cyclohydrolase II C6P08_03335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C6P08_03340 PF00731 AIR carboxylase C6P08_03345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C6P08_03345 PF02222 ATP-grasp domain C6P08_03350 PF01259 SAICAR synthetase C6P08_03355 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C6P08_03365 PF02769 AIR synthase related protein, C-terminal domain C6P08_03365 PF00586 AIR synthase related protein, N-terminal domain C6P08_03365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C6P08_03370 PF00156 Phosphoribosyl transferase domain C6P08_03370 PF13537 Glutamine amidotransferase domain C6P08_03375 PF00586 AIR synthase related protein, N-terminal domain C6P08_03375 PF02769 AIR synthase related protein, C-terminal domain C6P08_03380 PF00551 Formyl transferase C6P08_03385 PF01808 AICARFT/IMPCHase bienzyme C6P08_03385 PF02142 MGS-like domain C6P08_03390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C6P08_03390 PF02844 Phosphoribosylglycinamide synthetase, N domain C6P08_03390 PF02843 Phosphoribosylglycinamide synthetase, C domain C6P08_03395 PF01268 Formate--tetrahydrofolate ligase C6P08_03410 PF00324 Amino acid permease C6P08_03415 PF00224 Pyruvate kinase, barrel domain C6P08_03415 PF02887 Pyruvate kinase, alpha/beta domain C6P08_03415 PF00391 PEP-utilising enzyme, mobile domain C6P08_03425 PF04452 RNA methyltransferase C6P08_03435 PF01610 Transposase C6P08_03435 PF13683 Integrase core domain C6P08_03440 PF02381 MraZ protein, putative antitoxin-like C6P08_03445 PF01795 MraW methylase family C6P08_03460 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C6P08_03460 PF00953 Glycosyl transferase family 4 C6P08_03465 PF02875 Mur ligase family, glutamate ligase domain C6P08_03465 PF08245 Mur ligase middle domain C6P08_03470 PF04101 Glycosyltransferase family 28 C-terminal domain C6P08_03470 PF03033 Glycosyltransferase family 28 N-terminal domain C6P08_03475 PF08478 POTRA domain, FtsQ-type C6P08_03475 PF03799 Cell division protein FtsQ C6P08_03480 PF11983 Membrane-attachment and polymerisation-promoting switch C6P08_03480 PF02491 SHS2 domain inserted in FTSA C6P08_03485 PF12327 FtsZ family, C-terminal domain C6P08_03485 PF00091 Tubulin/FtsZ family, GTPase domain C6P08_03490 PF04472 Cell division protein SepF C6P08_03505 PF05103 DivIVA protein C6P08_03510 PF00133 tRNA synthetases class I (I, L, M and V) C6P08_03510 PF08264 Anticodon-binding domain of tRNA C6P08_03510 PF06827 Zinc finger found in FPG and IleRS C6P08_03515 PF00300 Histidine phosphatase superfamily (branch 1) C6P08_03525 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C6P08_03525 PF13538 UvrD-like helicase C-terminal domain C6P08_03525 PF14490 Helix-hairpin-helix containing domain C6P08_03530 PF01709 Transcriptional regulator C6P08_03535 PF00860 Permease family C6P08_03540 PF00437 Type II/IV secretion system protein C6P08_03550 PF07963 Prokaryotic N-terminal methylation motif C6P08_03550 PF08334 Type II secretion system (T2SS), protein G C6P08_03580 PF00871 Acetokinase family C6P08_03630 PF18074 Primosomal protein N C-terminal domain C6P08_03630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C6P08_03630 PF04851 Type III restriction enzyme, res subunit C6P08_03630 PF17764 3′ DNA-binding domain (3′BD) C6P08_03630 PF00271 Helicase conserved C-terminal domain C6P08_03635 PF00551 Formyl transferase C6P08_03635 PF02911 Formyl transferase, C-terminal domain C6P08_03640 PF01189 16S rRNA methyltransferase RsmB/F C6P08_03640 PF01029 NusB family C6P08_03650 PF03793 PASTA domain C6P08_03650 PF00069 Protein kinase domain C6P08_03655 PF03193 RsgA GTPase C6P08_03655 PF16745 RsgA N-terminal domain C6P08_03660 PF00834 Ribulose-phosphate 3 epimerase family C6P08_03665 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain C6P08_03665 PF04263 Thiamin pyrophosphokinase, catalytic domain C6P08_03670 PF00830 Ribosomal L28 family C6P08_03675 PF03780 Asp23 family, cell envelope-related function C6P08_03680 PF02734 DAK2 domain C6P08_03680 PF13684 Dihydroxyacetone kinase family C6P08_03685 PF06100 MCRA family C6P08_03690 PF17191 RecG wedge domain C6P08_03690 PF00271 Helicase conserved C-terminal domain C6P08_03690 PF00270 DEAD/DEAH box helicase C6P08_03695 PF02504 Fatty acid synthesis protein C6P08_03700 PF00550 Phosphopantetheine attachment site C6P08_03705 PF14622 Ribonuclease-III-like C6P08_03705 PF00035 Double-stranded RNA binding motif C6P08_03710 PF02463 RecF/RecN/SMC N terminal domain C6P08_03710 PF06470 SMC proteins Flexible Hinge Domain C6P08_03715 PF02881 SRP54-type protein, helical bundle domain C6P08_03715 PF00448 SRP54-type protein, GTPase domain C6P08_03720 PF04297 Putative helix-turn-helix protein, YlxM / p13 like C6P08_03725 PF02881 SRP54-type protein, helical bundle domain C6P08_03725 PF02978 Signal peptide binding domain C6P08_03725 PF00448 SRP54-type protein, GTPase domain C6P08_03730 PF00665 Integrase core domain C6P08_03730 PF13276 HTH-like domain C6P08_03730 PF13333 Integrase core domain C6P08_03750 PF00886 Ribosomal protein S16 C6P08_03765 PF00300 Histidine phosphatase superfamily (branch 1) C6P08_03770 PF05239 PRC-barrel domain C6P08_03770 PF01782 RimM N-terminal domain C6P08_03775 PF01746 tRNA (Guanine-1)-methyltransferase C6P08_03780 PF01245 Ribosomal protein L19 C6P08_03785 PF00375 Sodium:dicarboxylate symporter family C6P08_03790 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C6P08_03790 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C6P08_03795 PF01361 Tautomerase enzyme C6P08_03800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6P08_03800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6P08_03805 PF00877 NlpC/P60 family C6P08_03810 PF01712 Deoxynucleoside kinase C6P08_03815 PF01741 Large-conductance mechanosensitive channel, MscL C6P08_03855 PF00589 Phage integrase family C6P08_03855 PF02899 Phage integrase, N-terminal SAM-like domain C6P08_04060 PF00877 NlpC/P60 family C6P08_04060 PF01476 LysM domain C6P08_04175 PF06146 Phosphate-starvation-inducible E C6P08_04185 PF05816 Toxic anion resistance protein (TelA) C6P08_04190 PF03960 ArsC family C6P08_04195 PF05389 Negative regulator of genetic competence (MecA) C6P08_04200 PF00232 Glycosyl hydrolase family 1 C6P08_04205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6P08_04210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C6P08_04215 PF00232 Glycosyl hydrolase family 1 C6P08_04220 PF02378 Phosphotransferase system, EIIC C6P08_04225 PF06054 Competence protein CoiA-like family C6P08_04230 PF08439 Oligopeptidase F C6P08_04230 PF01432 Peptidase family M3 C6P08_04235 PF00230 Major intrinsic protein C6P08_04250 PF00356 Bacterial regulatory proteins, lacI family C6P08_04255 PF01321 Creatinase/Prolidase N-terminal domain C6P08_04255 PF00557 Metallopeptidase family M24 C6P08_04330 PF04127 DNA / pantothenate metabolism flavoprotein C6P08_04330 PF02441 Flavoprotein C6P08_04335 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal C6P08_04335 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal C6P08_04350 PF08239 Bacterial SH3 domain C6P08_04350 PF01520 N-acetylmuramoyl-L-alanine amidase C6P08_04360 PF13393 Histidyl-tRNA synthetase C6P08_04360 PF03129 Anticodon binding domain C6P08_04365 PF02938 GAD domain C6P08_04365 PF01336 OB-fold nucleic acid binding domain C6P08_04365 PF00152 tRNA synthetases class II (D, K and N) C6P08_04370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C6P08_04370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C6P08_04375 PF01165 Ribosomal protein S21 C6P08_04380 PF09424 Yqey-like protein C6P08_04385 PF02562 PhoH-like protein C6P08_04390 PF02130 Uncharacterized protein family UPF0054 C6P08_04395 PF01219 Prokaryotic diacylglycerol kinase C6P08_04400 PF07650 KH domain C6P08_04400 PF01926 50S ribosome-binding GTPase C6P08_04405 PF02565 Recombination protein O C terminal C6P08_04405 PF11967 Recombination protein O N terminal C6P08_04425 PF02091 Glycyl-tRNA synthetase alpha subunit C6P08_04430 PF02092 Glycyl-tRNA synthetase beta subunit C6P08_04435 PF03741 Integral membrane protein TerC family C6P08_04440 PF01042 Endoribonuclease L-PSP C6P08_04445 PF10282 Lactonase, 7-bladed beta-propeller C6P08_04450 PF01594 AI-2E family transporter C6P08_04455 PF00588 SpoU rRNA Methylase family C6P08_04460 PF17854 FtsK alpha domain C6P08_04460 PF09397 Ftsk gamma domain C6P08_04460 PF01580 FtsK/SpoIIIE family C6P08_04490 PF02151 UvrB/uvrC motif C6P08_04490 PF08459 UvrC Helix-hairpin-helix N-terminal C6P08_04490 PF01541 GIY-YIG catalytic domain C6P08_04495 PF01018 GTP1/OBG C6P08_04495 PF09269 Domain of unknown function (DUF1967) C6P08_04495 PF01926 50S ribosome-binding GTPase C6P08_04500 PF09186 Domain of unknown function (DUF1949) C6P08_04500 PF01205 Uncharacterized protein family UPF0029 C6P08_04510 PF07690 Major Facilitator Superfamily C6P08_04515 PF00571 CBS domain C6P08_04515 PF00478 IMP dehydrogenase / GMP reductase domain C6P08_04520 PF00478 IMP dehydrogenase / GMP reductase domain C6P08_04520 PF00571 CBS domain C6P08_04525 PF13382 Adenine deaminase C-terminal domain C6P08_04525 PF01979 Amidohydrolase family C6P08_04530 PF07499 RuvA, C-terminal domain C6P08_04530 PF01330 RuvA N terminal domain C6P08_04535 PF05496 Holliday junction DNA helicase RuvB P-loop domain C6P08_04535 PF05491 RuvB C-terminal winged helix domain C6P08_04535 PF17864 RuvB AAA lid domain C6P08_04540 PF02547 Queuosine biosynthesis protein C6P08_04580 PF01702 Queuine tRNA-ribosyltransferase C6P08_04585 PF02699 Preprotein translocase subunit C6P08_04590 PF11799 impB/mucB/samB family C-terminal domain C6P08_04590 PF00817 impB/mucB/samB family C6P08_04595 PF02272 DHHA1 domain C6P08_04595 PF01368 DHH family C6P08_04600 PF00271 Helicase conserved C-terminal domain C6P08_04600 PF00270 DEAD/DEAH box helicase C6P08_04605 PF02311 AraC-like ligand binding domain C6P08_04605 PF12833 Helix-turn-helix domain C6P08_04610 PF07690 Major Facilitator Superfamily C6P08_04620 PF01381 Helix-turn-helix C6P08_04625 PF02595 Glycerate kinase family C6P08_04630 PF01411 tRNA synthetases class II (A) C6P08_04630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C6P08_04630 PF02272 DHHA1 domain C6P08_04635 PF06135 IreB regulatory phosphoprotein C6P08_04640 PF03652 Holliday junction resolvase C6P08_04645 PF06949 Protein of unknown function (DUF1292) C6P08_04650 PF06949 Protein of unknown function (DUF1292) C6P08_04655 PF10531 SLBB domain C6P08_04660 PF00753 Metallo-beta-lactamase superfamily C6P08_04660 PF03772 Competence protein C6P08_04660 PF13567 Domain of unknown function (DUF4131) C6P08_04665 PF06144 DNA polymerase III, delta subunit C6P08_04670 PF00312 Ribosomal protein S15 C6P08_04675 PF01649 Ribosomal protein S20 C6P08_04685 PF00753 Metallo-beta-lactamase superfamily C6P08_04685 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C6P08_04685 PF17770 Ribonuclease J C-terminal domain C6P08_04695 PF03143 Elongation factor Tu C-terminal domain C6P08_04695 PF03144 Elongation factor Tu domain 2 C6P08_04695 PF00009 Elongation factor Tu GTP binding domain C6P08_04710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C6P08_04710 PF05697 Bacterial trigger factor protein (TF) C6P08_04710 PF05698 Bacterial trigger factor protein (TF) C-terminus C6P08_04715 PF06689 ClpX C4-type zinc finger C6P08_04715 PF10431 C-terminal, D2-small domain, of ClpB protein C6P08_04715 PF07724 AAA domain (Cdc48 subfamily) C6P08_04720 PF01926 50S ribosome-binding GTPase C6P08_04740 PF00488 MutS domain V C6P08_04740 PF01713 Smr domain C6P08_04760 PF01270 Glycosyl hydrolases family 8 C6P08_04765 PF02350 UDP-N-acetylglucosamine 2-epimerase C6P08_04775 PF00085 Thioredoxin C6P08_04780 PF12464 Maltose acetyltransferase C6P08_04780 PF14602 Hexapeptide repeat of succinyl-transferase C6P08_04785 PF02872 5'-nucleotidase, C-terminal domain C6P08_04785 PF00149 Calcineurin-like phosphoesterase C6P08_04790 PF08402 TOBE domain C6P08_04790 PF00005 ABC transporter C6P08_04795 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_04800 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_04815 PF01433 Peptidase family M1 domain C6P08_04815 PF11838 ERAP1-like C-terminal domain C6P08_04820 PF07687 Peptidase dimerisation domain C6P08_04820 PF01546 Peptidase family M20/M25/M40 C6P08_04845 PF13538 UvrD-like helicase C-terminal domain C6P08_04855 PF06628 Catalase-related immune-responsive C6P08_04855 PF00199 Catalase C6P08_04865 PF10502 Signal peptidase, peptidase S26 C6P08_04875 PF02378 Phosphotransferase system, EIIC C6P08_04875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_04875 PF00367 phosphotransferase system, EIIB C6P08_04880 PF00251 Glycosyl hydrolases family 32 N-terminal domain C6P08_04880 PF08244 Glycosyl hydrolases family 32 C terminal C6P08_04885 PF00356 Bacterial regulatory proteins, lacI family C6P08_04885 PF13407 Periplasmic binding protein domain C6P08_04920 PF00107 Zinc-binding dehydrogenase C6P08_04920 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_04930 PF07155 ECF-type riboflavin transporter, S component C6P08_04935 PF12558 ATP-binding cassette cobalt transporter C6P08_04935 PF00005 ABC transporter C6P08_04945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_04950 PF01979 Amidohydrolase family C6P08_04955 PF13276 HTH-like domain C6P08_04955 PF00665 Integrase core domain C6P08_04955 PF13333 Integrase core domain C6P08_05015 PF00232 Glycosyl hydrolase family 1 C6P08_05050 PF02110 Hydroxyethylthiazole kinase family C6P08_05055 PF08543 Phosphomethylpyrimidine kinase C6P08_05060 PF02581 Thiamine monophosphate synthase C6P08_05070 PF00106 short chain dehydrogenase C6P08_05135 PF13419 Haloacid dehalogenase-like hydrolase C6P08_05140 PF01177 Asp/Glu/Hydantoin racemase C6P08_05145 PF01725 Ham1 family C6P08_05160 PF04607 Region found in RelA / SpoT proteins C6P08_05165 PF01513 ATP-NAD kinase C6P08_05170 PF00849 RNA pseudouridylate synthase C6P08_05175 PF03448 MgtE intracellular N domain C6P08_05175 PF01769 Divalent cation transporter C6P08_05175 PF00571 CBS domain C6P08_05180 PF07690 Major Facilitator Superfamily C6P08_05185 PF01987 Mitochondrial biogenesis AIM24 C6P08_05205 PF04237 YjbR C6P08_05220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6P08_05230 PF03466 LysR substrate binding domain C6P08_05240 PF00248 Aldo/keto reductase family C6P08_05245 PF02627 Carboxymuconolactone decarboxylase family C6P08_05260 PF01047 MarR family C6P08_05265 PF13673 Acetyltransferase (GNAT) domain C6P08_05315 PF02913 FAD linked oxidases, C-terminal domain C6P08_05315 PF01565 FAD binding domain C6P08_05320 PF00155 Aminotransferase class I and II C6P08_05325 PF00056 lactate/malate dehydrogenase, NAD binding domain C6P08_05325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C6P08_05330 PF03180 NLPA lipoprotein C6P08_05355 PF01177 Asp/Glu/Hydantoin racemase C6P08_05365 PF00561 alpha/beta hydrolase fold C6P08_05370 PF14552 Tautomerase enzyme C6P08_05390 PF01810 LysE type translocator C6P08_05395 PF02567 Phenazine biosynthesis-like protein C6P08_05410 PF00107 Zinc-binding dehydrogenase C6P08_05410 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_05445 PF00356 Bacterial regulatory proteins, lacI family C6P08_05450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_05455 PF16874 Glycosyl hydrolase family 36 C-terminal domain C6P08_05455 PF16875 Glycosyl hydrolase family 36 N-terminal domain C6P08_05485 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) C6P08_05490 PF00455 DeoR C terminal sensor domain C6P08_05490 PF08220 DeoR-like helix-turn-helix domain C6P08_05495 PF00294 pfkB family carbohydrate kinase C6P08_05500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C6P08_05500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6P08_05505 PF13276 HTH-like domain C6P08_05505 PF13333 Integrase core domain C6P08_05505 PF00665 Integrase core domain C6P08_05520 PF07690 Major Facilitator Superfamily C6P08_05525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6P08_05525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6P08_05530 PF13536 Putative multidrug resistance efflux transporter C6P08_05540 PF12822 ECF transporter, substrate-specific component C6P08_05560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C6P08_05570 PF01202 Shikimate kinase C6P08_05575 PF07690 Major Facilitator Superfamily C6P08_05580 PF01264 Chorismate synthase C6P08_05585 PF09330 D-lactate dehydrogenase, membrane binding C6P08_05585 PF01565 FAD binding domain C6P08_05605 PF07690 Major Facilitator Superfamily C6P08_05620 PF02576 RimP N-terminal domain C6P08_05620 PF17384 RimP C-terminal SH3 domain C6P08_05625 PF08529 NusA N-terminal domain C6P08_05625 PF00575 S1 RNA binding domain C6P08_05625 PF13184 NusA-like KH domain C6P08_05630 PF04296 Protein of unknown function (DUF448) C6P08_05635 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C6P08_05640 PF11987 Translation-initiation factor 2 C6P08_05640 PF00009 Elongation factor Tu GTP binding domain C6P08_05640 PF04760 Translation initiation factor IF-2, N-terminal region C6P08_05645 PF02033 Ribosome-binding factor A C6P08_05650 PF16198 tRNA pseudouridylate synthase B C-terminal domain C6P08_05650 PF01509 TruB family pseudouridylate synthase (N terminal domain) C6P08_05655 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_05665 PF01687 Riboflavin kinase C6P08_05665 PF06574 FAD synthetase C6P08_05675 PF03932 CutC family C6P08_05690 PF11700 Vacuole effluxer Atg22 like C6P08_05695 PF02645 Uncharacterised protein, DegV family COG1307 C6P08_05700 PF02645 Uncharacterised protein, DegV family COG1307 C6P08_05705 PF13472 GDSL-like Lipase/Acylhydrolase family C6P08_05715 PF06855 YozE SAM-like fold C6P08_05720 PF01926 50S ribosome-binding GTPase C6P08_05725 PF01351 Ribonuclease HII C6P08_05730 PF18255 DNA processing protein A sterile alpha motif domain C6P08_05730 PF02481 DNA recombination-mediator protein A C6P08_05735 PF01131 DNA topoisomerase C6P08_05735 PF01396 Topoisomerase DNA binding C4 zinc finger C6P08_05735 PF01751 Toprim domain C6P08_05740 PF00589 Phage integrase family C6P08_05740 PF02899 Phage integrase, N-terminal SAM-like domain C6P08_05750 PF02660 Glycerol-3-phosphate acyltransferase C6P08_05755 PF00204 DNA gyrase B C6P08_05755 PF00986 DNA gyrase B subunit, carboxyl terminus C6P08_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_05755 PF01751 Toprim domain C6P08_05760 PF03989 DNA gyrase C-terminal domain, beta-propeller C6P08_05760 PF00521 DNA gyrase/topoisomerase IV, subunit A C6P08_05765 PF01368 DHH family C6P08_05765 PF02833 DHHA2 domain C6P08_05775 PF00005 ABC transporter C6P08_05775 PF00571 CBS domain C6P08_05780 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_05785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_05790 PF03180 NLPA lipoprotein C6P08_05795 PF01625 Peptide methionine sulfoxide reductase C6P08_05800 PF13333 Integrase core domain C6P08_05800 PF13276 HTH-like domain C6P08_05800 PF00665 Integrase core domain C6P08_05810 PF00781 Diacylglycerol kinase catalytic domain C6P08_05815 PF13419 Haloacid dehalogenase-like hydrolase C6P08_05825 PF00753 Metallo-beta-lactamase superfamily C6P08_05825 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C6P08_05825 PF17770 Ribonuclease J C-terminal domain C6P08_05845 PF01327 Polypeptide deformylase C6P08_05850 PF05256 Uncharacterised protein family (UPF0223) C6P08_05855 PF00459 Inositol monophosphatase family C6P08_05865 PF01098 Cell cycle protein C6P08_05870 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) C6P08_05880 PF01467 Cytidylyltransferase-like C6P08_05885 PF13180 PDZ domain C6P08_05885 PF05362 Lon protease (S16) C-terminal proteolytic domain C6P08_05890 PF00665 Integrase core domain C6P08_05890 PF13333 Integrase core domain C6P08_05890 PF13276 HTH-like domain C6P08_05900 PF00334 Nucleoside diphosphate kinase C6P08_05905 PF07690 Major Facilitator Superfamily C6P08_05910 PF10410 DnaB-helicase binding domain of primase C6P08_05910 PF01807 CHC2 zinc finger C6P08_05910 PF08275 DNA primase catalytic core, N-terminal domain C6P08_05915 PF04542 Sigma-70 region 2 C6P08_05915 PF03979 Sigma-70 factor, region 1.1 C6P08_05915 PF00140 Sigma-70 factor, region 1.2 C6P08_05915 PF04539 Sigma-70 region 3 C6P08_05915 PF04545 Sigma-70, region 4 C6P08_05935 PF07690 Major Facilitator Superfamily C6P08_05940 PF00072 Response regulator receiver domain C6P08_05940 PF00486 Transcriptional regulatory protein, C terminal C6P08_05945 PF16736 Single Cache-like C6P08_05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_05945 PF00989 PAS fold C6P08_05945 PF00512 His Kinase A (phospho-acceptor) domain C6P08_05950 PF00485 Phosphoribulokinase / Uridine kinase family C6P08_05955 PF05343 M42 glutamyl aminopeptidase C6P08_05960 PF01588 Putative tRNA binding domain C6P08_05960 PF14794 Domain of unknown function (DUF4479) C6P08_05970 PF08245 Mur ligase middle domain C6P08_05970 PF01225 Mur ligase family, catalytic domain C6P08_05970 PF02875 Mur ligase family, glutamate ligase domain C6P08_05975 PF01027 Inhibitor of apoptosis-promoting Bax1 C6P08_05980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C6P08_05980 PF00476 DNA polymerase family A C6P08_05980 PF01367 5'-3' exonuclease, C-terminal SAM fold C6P08_05985 PF06827 Zinc finger found in FPG and IleRS C6P08_05985 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C6P08_05985 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C6P08_05990 PF01121 Dephospho-CoA kinase C6P08_06000 PF07319 Primosomal protein DnaI N-terminus C6P08_06000 PF01695 IstB-like ATP binding protein C6P08_06015 PF00072 Response regulator receiver domain C6P08_06015 PF00486 Transcriptional regulatory protein, C terminal C6P08_06020 PF18719 ArlS sensor domain C6P08_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_06020 PF00512 His Kinase A (phospho-acceptor) domain C6P08_06035 PF13520 Amino acid permease C6P08_06040 PF14552 Tautomerase enzyme C6P08_06055 PF02096 60Kd inner membrane protein C6P08_06065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C6P08_06065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C6P08_06070 PF07724 AAA domain (Cdc48 subfamily) C6P08_06070 PF00004 ATPase family associated with various cellular activities (AAA) C6P08_06070 PF17871 AAA lid domain C6P08_06070 PF10431 C-terminal, D2-small domain, of ClpB protein C6P08_06095 PF02687 FtsX-like permease family C6P08_06100 PF00005 ABC transporter C6P08_06105 PF00893 Small Multidrug Resistance protein C6P08_06110 PF00893 Small Multidrug Resistance protein C6P08_06115 PF00440 Bacterial regulatory proteins, tetR family C6P08_06120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_06120 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_06135 PF00390 Malic enzyme, N-terminal domain C6P08_06135 PF03949 Malic enzyme, NAD binding domain C6P08_06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6P08_06140 PF03466 LysR substrate binding domain C6P08_06145 PF00106 short chain dehydrogenase C6P08_06150 PF13520 Amino acid permease C6P08_06160 PF06177 QueT transporter C6P08_06180 PF06421 GTP-binding protein LepA C-terminus C6P08_06180 PF00009 Elongation factor Tu GTP binding domain C6P08_06180 PF00679 Elongation factor G C-terminus C6P08_06190 PF13520 Amino acid permease C6P08_06210 PF13302 Acetyltransferase (GNAT) domain C6P08_06220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_06230 PF01566 Natural resistance-associated macrophage protein C6P08_06250 PF00583 Acetyltransferase (GNAT) family C6P08_06270 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_06270 PF00107 Zinc-binding dehydrogenase C6P08_06310 PF10702 Protein of unknown function (DUF2507) C6P08_06315 PF02390 Putative methyltransferase C6P08_06325 PF00005 ABC transporter C6P08_06330 PF01230 HIT domain C6P08_06340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C6P08_06345 PF00854 POT family C6P08_06355 PF01070 FMN-dependent dehydrogenase C6P08_06380 PF13302 Acetyltransferase (GNAT) domain C6P08_06385 PF00809 Pterin binding enzyme C6P08_06390 PF00809 Pterin binding enzyme C6P08_06395 PF08245 Mur ligase middle domain C6P08_06395 PF02875 Mur ligase family, glutamate ligase domain C6P08_06400 PF01227 GTP cyclohydrolase I C6P08_06405 PF01227 GTP cyclohydrolase I C6P08_06405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C6P08_06415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C6P08_06420 PF00232 Glycosyl hydrolase family 1 C6P08_06430 PF00135 Carboxylesterase family C6P08_06435 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C6P08_06440 PF01039 Carboxyl transferase domain C6P08_06445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6P08_06445 PF00289 Biotin carboxylase, N-terminal domain C6P08_06445 PF02785 Biotin carboxylase C-terminal domain C6P08_06455 PF02151 UvrB/uvrC motif C6P08_06455 PF04851 Type III restriction enzyme, res subunit C6P08_06455 PF00271 Helicase conserved C-terminal domain C6P08_06455 PF17757 UvrB interaction domain C6P08_06455 PF12344 Ultra-violet resistance protein B C6P08_06470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C6P08_06470 PF03120 NAD-dependent DNA ligase OB-fold domain C6P08_06470 PF01653 NAD-dependent DNA ligase adenylation domain C6P08_06470 PF00533 BRCA1 C Terminus (BRCT) domain C6P08_06470 PF12826 Helix-hairpin-helix motif C6P08_06475 PF13361 UvrD-like helicase C-terminal domain C6P08_06475 PF00580 UvrD/REP helicase N-terminal domain C6P08_06480 PF02926 THUMP domain C6P08_06480 PF01170 Putative RNA methylase family UPF0020 C6P08_06490 PF05103 DivIVA protein C6P08_06495 PF06908 YspA SLOG family C6P08_06500 PF03838 Recombination protein U C6P08_06505 PF00905 Penicillin binding protein transpeptidase domain C6P08_06505 PF00912 Transglycosylase C6P08_06510 PF13683 Integrase core domain C6P08_06510 PF01610 Transposase C6P08_06515 PF00664 ABC transporter transmembrane region C6P08_06515 PF00005 ABC transporter C6P08_06520 PF00664 ABC transporter transmembrane region C6P08_06520 PF00005 ABC transporter C6P08_06525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_06530 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_06535 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_06540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6P08_06540 PF00005 ABC transporter C6P08_06545 PF00005 ABC transporter C6P08_06545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6P08_06550 PF07261 Replication initiation and membrane attachment C6P08_06555 PF00152 tRNA synthetases class II (D, K and N) C6P08_06555 PF01336 OB-fold nucleic acid binding domain C6P08_06560 PF17881 Domain of unknown function (DUF5590) C6P08_06560 PF03413 Peptidase propeptide and YPEB domain C6P08_06565 PF04851 Type III restriction enzyme, res subunit C6P08_06565 PF13307 Helicase C-terminal domain C6P08_06565 PF00929 Exonuclease C6P08_06570 PF10509 Galactokinase galactose-binding signature C6P08_06570 PF08544 GHMP kinases C terminal C6P08_06570 PF00288 GHMP kinases N terminal domain C6P08_06580 PF00288 GHMP kinases N terminal domain C6P08_06580 PF08544 GHMP kinases C terminal C6P08_06585 PF01070 FMN-dependent dehydrogenase C6P08_06600 PF01381 Helix-turn-helix C6P08_06605 PF02929 Beta galactosidase small chain C6P08_06610 PF00703 Glycosyl hydrolases family 2 C6P08_06610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C6P08_06610 PF02837 Glycosyl hydrolases family 2, sugar binding domain C6P08_06615 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C6P08_06615 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C6P08_06620 PF00288 GHMP kinases N terminal domain C6P08_06620 PF08544 GHMP kinases C terminal C6P08_06620 PF10509 Galactokinase galactose-binding signature C6P08_06625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C6P08_06630 PF02311 AraC-like ligand binding domain C6P08_06630 PF12833 Helix-turn-helix domain C6P08_06635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C6P08_06635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C6P08_06635 PF00205 Thiamine pyrophosphate enzyme, central domain C6P08_06640 PF00253 Ribosomal protein S14p/S29e C6P08_06645 PF00471 Ribosomal protein L33 C6P08_06650 PF04607 Region found in RelA / SpoT proteins C6P08_06670 PF00289 Biotin carboxylase, N-terminal domain C6P08_06670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6P08_06670 PF00682 HMGL-like C6P08_06670 PF02436 Conserved carboxylase domain C6P08_06670 PF00364 Biotin-requiring enzyme C6P08_06670 PF02785 Biotin carboxylase C-terminal domain C6P08_06680 PF00871 Acetokinase family C6P08_06685 PF01546 Peptidase family M20/M25/M40 C6P08_06685 PF07687 Peptidase dimerisation domain C6P08_06690 PF01784 NIF3 (NGG1p interacting factor 3) C6P08_06695 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C6P08_06700 PF00011 Hsp20/alpha crystallin family C6P08_06735 PF13476 AAA domain C6P08_06740 PF12320 Type 5 capsule protein repressor C-terminal domain C6P08_06740 PF00149 Calcineurin-like phosphoesterase C6P08_06745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C6P08_06745 PF00056 lactate/malate dehydrogenase, NAD binding domain C6P08_06750 PF07690 Major Facilitator Superfamily C6P08_06755 PF07155 ECF-type riboflavin transporter, S component C6P08_06785 PF01555 DNA methylase C6P08_06790 PF01555 DNA methylase C6P08_06960 PF00216 Bacterial DNA-binding protein C6P08_06965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C6P08_06965 PF01926 50S ribosome-binding GTPase C6P08_06970 PF00575 S1 RNA binding domain C6P08_06975 PF02224 Cytidylate kinase C6P08_06985 PF00271 Helicase conserved C-terminal domain C6P08_06985 PF00270 DEAD/DEAH box helicase C6P08_06995 PF12822 ECF transporter, substrate-specific component C6P08_07005 PF06736 Protein of unknown function (DUF1211) C6P08_07010 PF00849 RNA pseudouridylate synthase C6P08_07010 PF01479 S4 domain C6P08_07015 PF04079 Segregation and condensation complex subunit ScpB C6P08_07020 PF02616 Segregation and condensation protein ScpA C6P08_07030 PF02899 Phage integrase, N-terminal SAM-like domain C6P08_07030 PF00589 Phage integrase family C6P08_07035 PF17783 CvfB-like winged helix domain C6P08_07035 PF13509 S1 domain C6P08_07055 PF00999 Sodium/hydrogen exchanger family C6P08_07065 PF02580 D-Tyr-tRNA(Tyr) deacylase C6P08_07070 PF02824 TGS domain C6P08_07070 PF04607 Region found in RelA / SpoT proteins C6P08_07070 PF13291 ACT domain C6P08_07075 PF01336 OB-fold nucleic acid binding domain C6P08_07075 PF14579 Helix-hairpin-helix motif C6P08_07075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C6P08_07075 PF07733 Bacterial DNA polymerase III alpha NTPase domain C6P08_07075 PF02811 PHP domain C6P08_07085 PF00186 Dihydrofolate reductase C6P08_07090 PF00005 ABC transporter C6P08_07090 PF12848 ABC transporter C6P08_07090 PF16326 ABC transporter C-terminal domain C6P08_07095 PF13735 tRNA nucleotidyltransferase domain 2 putative C6P08_07095 PF12627 Probable RNA and SrmB- binding site of polymerase A C6P08_07095 PF01743 Poly A polymerase head domain C6P08_07110 PF01380 SIS domain C6P08_07115 PF01232 Mannitol dehydrogenase Rossmann domain C6P08_07115 PF08125 Mannitol dehydrogenase C-terminal domain C6P08_07120 PF02378 Phosphotransferase system, EIIC C6P08_07120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C6P08_07125 PF00909 Ammonium Transporter Family C6P08_07130 PF00480 ROK family C6P08_07150 PF13683 Integrase core domain C6P08_07150 PF01610 Transposase C6P08_07155 PF01765 Ribosome recycling factor C6P08_07160 PF00696 Amino acid kinase family C6P08_07165 PF00889 Elongation factor TS C6P08_07170 PF01510 N-acetylmuramoyl-L-alanine amidase C6P08_07170 PF01476 LysM domain C6P08_07170 PF01471 Putative peptidoglycan binding domain C6P08_07180 PF00318 Ribosomal protein S2 C6P08_07185 PF01541 GIY-YIG catalytic domain C6P08_07190 PF05175 Methyltransferase small domain C6P08_07190 PF17827 PrmC N-terminal domain C6P08_07190 PF02390 Putative methyltransferase C6P08_07195 PF01553 Acyltransferase C6P08_07200 PF00877 NlpC/P60 family C6P08_07205 PF03672 Uncharacterised protein family (UPF0154) C6P08_07210 PF05979 Bacterial protein of unknown function (DUF896) C6P08_07215 PF01726 LexA DNA binding domain C6P08_07215 PF00717 Peptidase S24-like C6P08_07220 PF00156 Phosphoribosyl transferase domain C6P08_07225 PF17768 RecJ OB domain C6P08_07225 PF02272 DHHA1 domain C6P08_07225 PF01368 DHH family C6P08_07225 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C6P08_07230 PF00753 Metallo-beta-lactamase superfamily C6P08_07230 PF12706 Beta-lactamase superfamily domain C6P08_07245 PF00226 DnaJ domain C6P08_07245 PF01556 DnaJ C terminal domain C6P08_07245 PF00684 DnaJ central domain C6P08_07250 PF00012 Hsp70 protein C6P08_07255 PF01025 GrpE C6P08_07260 PF01628 HrcA protein C terminal domain C6P08_07260 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C6P08_07300 PF00877 NlpC/P60 family C6P08_07310 PF00535 Glycosyl transferase family 2 C6P08_07315 PF00535 Glycosyl transferase family 2 C6P08_07325 PF00535 Glycosyl transferase family 2 C6P08_07335 PF03275 UDP-galactopyranose mutase C6P08_07360 PF01473 Putative cell wall binding repeat C6P08_07360 PF02324 Glycosyl hydrolase family 70 C6P08_07365 PF02397 Bacterial sugar transferase C6P08_07370 PF00557 Metallopeptidase family M24 C6P08_07390 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C6P08_07395 PF01168 Alanine racemase, N-terminal domain C6P08_07395 PF01757 Acyltransferase family C6P08_07395 PF00842 Alanine racemase, C-terminal domain C6P08_07400 PF00535 Glycosyl transferase family 2 C6P08_07400 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C6P08_07405 PF01061 ABC-2 type transporter C6P08_07410 PF01476 LysM domain C6P08_07410 PF00005 ABC transporter C6P08_07415 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C6P08_07420 PF01467 Cytidylyltransferase-like C6P08_07425 PF04991 LicD family C6P08_07440 PF01476 LysM domain C6P08_07440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C6P08_07445 PF03816 Cell envelope-related transcriptional attenuator domain C6P08_07450 PF04138 GtrA-like protein C6P08_07470 PF13276 HTH-like domain C6P08_07470 PF00665 Integrase core domain C6P08_07470 PF13333 Integrase core domain C6P08_07485 PF02073 Thermophilic metalloprotease (M29) C6P08_07505 PF01479 S4 domain C6P08_07505 PF00849 RNA pseudouridylate synthase C6P08_07510 PF00313 'Cold-shock' DNA-binding domain C6P08_07520 PF01545 Cation efflux family C6P08_07520 PF16916 Dimerisation domain of Zinc Transporter C6P08_07530 PF00485 Phosphoribulokinase / Uridine kinase family C6P08_07535 PF13538 UvrD-like helicase C-terminal domain C6P08_07545 PF00154 recA bacterial DNA recombination protein C6P08_07550 PF02464 Competence-damaged protein C6P08_07550 PF18146 Damage-inducible protein CinA KH domain C6P08_07550 PF00994 Probable molybdopterin binding domain C6P08_07555 PF13683 Integrase core domain C6P08_07555 PF01610 Transposase C6P08_07560 PF01066 CDP-alcohol phosphatidyltransferase C6P08_07565 PF13464 Domain of unknown function (DUF4115) C6P08_07570 PF05193 Peptidase M16 inactive domain C6P08_07570 PF00675 Insulinase (Peptidase family M16) C6P08_07575 PF05193 Peptidase M16 inactive domain C6P08_07585 PF02447 GntP family permease C6P08_07590 PF02447 GntP family permease C6P08_07595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6P08_07595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6P08_07615 PF00535 Glycosyl transferase family 2 C6P08_07620 PF01336 OB-fold nucleic acid binding domain C6P08_07620 PF01966 HD domain C6P08_07625 PF13514 AAA domain C6P08_07630 PF00149 Calcineurin-like phosphoesterase C6P08_07635 PF06133 Control of competence regulator ComK, YlbF/YmcA C6P08_07640 PF00905 Penicillin binding protein transpeptidase domain C6P08_07640 PF00912 Transglycosylase C6P08_07645 PF02863 Arginine repressor, C-terminal domain C6P08_07645 PF01316 Arginine repressor, DNA binding domain C6P08_07650 PF01384 Phosphate transporter family C6P08_07655 PF07722 Peptidase C26 C6P08_07660 PF03485 Arginyl tRNA synthetase N terminal domain C6P08_07660 PF00750 tRNA synthetases class I (R) C6P08_07660 PF05746 DALR anticodon binding domain C6P08_07670 PF02875 Mur ligase family, glutamate ligase domain C6P08_07670 PF08245 Mur ligase middle domain C6P08_07675 PF01725 Ham1 family C6P08_07680 PF08245 Mur ligase middle domain C6P08_07680 PF02875 Mur ligase family, glutamate ligase domain C6P08_07685 PF00005 ABC transporter C6P08_07690 PF00950 ABC 3 transport family C6P08_07695 PF01297 Zinc-uptake complex component A periplasmic C6P08_07700 PF04237 YjbR C6P08_07720 PF00781 Diacylglycerol kinase catalytic domain C6P08_07725 PF02934 GatB/GatE catalytic domain C6P08_07725 PF02637 GatB domain C6P08_07730 PF01425 Amidase C6P08_07735 PF02686 Glu-tRNAGln amidotransferase C subunit C6P08_07740 PF01189 16S rRNA methyltransferase RsmB/F C6P08_07740 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C6P08_07740 PF17126 RsmF rRNA methyltransferase first C-terminal domain C6P08_07750 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C6P08_07750 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C6P08_07750 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal C6P08_07755 PF02447 GntP family permease C6P08_07775 PF01566 Natural resistance-associated macrophage protein C6P08_07780 PF13508 Acetyltransferase (GNAT) domain C6P08_07780 PF00583 Acetyltransferase (GNAT) family C6P08_07795 PF00294 pfkB family carbohydrate kinase C6P08_07800 PF00248 Aldo/keto reductase family C6P08_07805 PF14572 Phosphoribosyl synthetase-associated domain C6P08_07805 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C6P08_07810 PF01180 Dihydroorotate dehydrogenase C6P08_07820 PF00005 ABC transporter C6P08_07835 PF01487 Type I 3-dehydroquinase C6P08_07840 PF01202 Shikimate kinase C6P08_07845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C6P08_07850 PF01264 Chorismate synthase C6P08_07855 PF01761 3-dehydroquinate synthase C6P08_07860 PF00793 DAHP synthetase I family C6P08_07860 PF18152 DAHP synthase ferredoxin-like domain C6P08_07865 PF08501 Shikimate dehydrogenase substrate binding domain C6P08_07865 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C6P08_07865 PF01488 Shikimate / quinate 5-dehydrogenase C6P08_07885 PF03060 Nitronate monooxygenase C6P08_07890 PF01144 Coenzyme A transferase C6P08_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6P08_07895 PF03466 LysR substrate binding domain C6P08_07910 PF13439 Glycosyltransferase Family 4 C6P08_07925 PF12822 ECF transporter, substrate-specific component C6P08_07930 PF13419 Haloacid dehalogenase-like hydrolase C6P08_07935 PF03632 Glycosyl hydrolase family 65 central catalytic domain C6P08_07935 PF03636 Glycosyl hydrolase family 65, N-terminal domain C6P08_07935 PF03633 Glycosyl hydrolase family 65, C-terminal domain C6P08_07940 PF02903 Alpha amylase, N-terminal ig-like domain C6P08_07940 PF00128 Alpha amylase, catalytic domain C6P08_07950 PF00356 Bacterial regulatory proteins, lacI family C6P08_07955 PF12704 MacB-like periplasmic core domain C6P08_07955 PF00005 ABC transporter C6P08_07955 PF02687 FtsX-like permease family C6P08_07960 PF00005 ABC transporter C6P08_07975 PF00005 ABC transporter C6P08_07990 PF00155 Aminotransferase class I and II C6P08_08000 PF00561 alpha/beta hydrolase fold C6P08_08005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_08020 PF02774 Semialdehyde dehydrogenase, dimerisation domain C6P08_08020 PF01118 Semialdehyde dehydrogenase, NAD binding domain C6P08_08025 PF00155 Aminotransferase class I and II C6P08_08030 PF05173 Dihydrodipicolinate reductase, C-terminus C6P08_08030 PF01113 Dihydrodipicolinate reductase, N-terminus C6P08_08035 PF00701 Dihydrodipicolinate synthetase family C6P08_08040 PF07687 Peptidase dimerisation domain C6P08_08040 PF01546 Peptidase family M20/M25/M40 C6P08_08045 PF14602 Hexapeptide repeat of succinyl-transferase C6P08_08045 PF00132 Bacterial transferase hexapeptide (six repeats) C6P08_08045 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C6P08_08050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C6P08_08050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C6P08_08055 PF00842 Alanine racemase, C-terminal domain C6P08_08055 PF01168 Alanine racemase, N-terminal domain C6P08_08060 PF13840 ACT domain C6P08_08060 PF00696 Amino acid kinase family C6P08_08070 PF00356 Bacterial regulatory proteins, lacI family C6P08_08075 PF00288 GHMP kinases N terminal domain C6P08_08075 PF08544 GHMP kinases C terminal C6P08_08080 PF12822 ECF transporter, substrate-specific component C6P08_08090 PF02742 Iron dependent repressor, metal binding and dimerisation domain C6P08_08090 PF00950 ABC 3 transport family C6P08_08095 PF04203 Sortase domain C6P08_08100 PF06971 Putative DNA-binding protein N-terminus C6P08_08100 PF02629 CoA binding domain C6P08_08105 PF00270 DEAD/DEAH box helicase C6P08_08105 PF00271 Helicase conserved C-terminal domain C6P08_08110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6P08_08115 PF05958 tRNA (Uracil-5-)-methyltransferase C6P08_08115 PF01938 TRAM domain C6P08_08120 PF01435 Peptidase family M48 C6P08_08125 PF04011 LemA family C6P08_08130 PF00144 Beta-lactamase C6P08_08135 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C6P08_08140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C6P08_08140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C6P08_08140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C6P08_08140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C6P08_08145 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C6P08_08150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C6P08_08155 PF01039 Carboxyl transferase domain C6P08_08160 PF00289 Biotin carboxylase, N-terminal domain C6P08_08160 PF02785 Biotin carboxylase C-terminal domain C6P08_08160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6P08_08165 PF07977 FabA-like domain C6P08_08170 PF00364 Biotin-requiring enzyme C6P08_08175 PF02801 Beta-ketoacyl synthase, C-terminal domain C6P08_08175 PF00109 Beta-ketoacyl synthase, N-terminal domain C6P08_08185 PF00698 Acyl transferase domain C6P08_08190 PF03060 Nitronate monooxygenase C6P08_08195 PF00550 Phosphopantetheine attachment site C6P08_08200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C6P08_08200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C6P08_08205 PF01047 MarR family C6P08_08210 PF07977 FabA-like domain C6P08_08220 PF00206 Lyase C6P08_08220 PF10397 Adenylosuccinate lyase C-terminus C6P08_08230 PF03816 Cell envelope-related transcriptional attenuator domain C6P08_08235 PF01565 FAD binding domain C6P08_08235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C6P08_08250 PF00535 Glycosyl transferase family 2 C6P08_08260 PF00535 Glycosyl transferase family 2 C6P08_08265 PF13439 Glycosyltransferase Family 4 C6P08_08265 PF00534 Glycosyl transferases group 1 C6P08_08270 PF00534 Glycosyl transferases group 1 C6P08_08270 PF13439 Glycosyltransferase Family 4 C6P08_08275 PF02397 Bacterial sugar transferase C6P08_08280 PF13614 AAA domain C6P08_08285 PF02706 Chain length determinant protein C6P08_08295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6P08_08295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C6P08_08295 PF02142 MGS-like domain C6P08_08300 PF00117 Glutamine amidotransferase class-I C6P08_08300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C6P08_08305 PF00156 Phosphoribosyl transferase domain C6P08_08310 PF00849 RNA pseudouridylate synthase C6P08_08310 PF01479 S4 domain C6P08_08320 PF13456 Reverse transcriptase-like C6P08_08360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C6P08_08365 PF00324 Amino acid permease C6P08_08385 PF04073 Aminoacyl-tRNA editing domain C6P08_08390 PF01197 Ribosomal protein L31 C6P08_08395 PF03144 Elongation factor Tu domain 2 C6P08_08395 PF00679 Elongation factor G C-terminus C6P08_08395 PF00009 Elongation factor Tu GTP binding domain C6P08_08395 PF06421 GTP-binding protein LepA C-terminus C6P08_08400 PF00248 Aldo/keto reductase family C6P08_08405 PF13396 Phospholipase_D-nuclease N-terminal C6P08_08405 PF13091 PLD-like domain C6P08_08410 PF00664 ABC transporter transmembrane region C6P08_08410 PF00005 ABC transporter C6P08_08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C6P08_08420 PF03466 LysR substrate binding domain C6P08_08425 PF04474 Protein of unknown function (DUF554) C6P08_08430 PF00162 Phosphoglycerate kinase C6P08_08435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C6P08_08435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C6P08_08470 PF01223 DNA/RNA non-specific endonuclease C6P08_08490 PF04914 DltD protein C6P08_08495 PF00550 Phosphopantetheine attachment site C6P08_08500 PF03062 MBOAT, membrane-bound O-acyltransferase family C6P08_08505 PF13193 AMP-binding enzyme C-terminal domain C6P08_08505 PF00501 AMP-binding enzyme C6P08_08510 PF12459 D-Ala-teichoic acid biosynthesis protein C6P08_08515 PF00300 Histidine phosphatase superfamily (branch 1) C6P08_08525 PF03613 PTS system mannose/fructose/sorbose family IID component C6P08_08530 PF03609 PTS system sorbose-specific iic component C6P08_08535 PF03830 PTS system sorbose subfamily IIB component C6P08_08535 PF03610 PTS system fructose IIA component C6P08_08540 PF00206 Lyase C6P08_08540 PF10415 Fumarase C C-terminus C6P08_08550 PF03747 ADP-ribosylglycohydrolase C6P08_08610 PF00884 Sulfatase C6P08_08625 PF13439 Glycosyltransferase Family 4 C6P08_08625 PF00534 Glycosyl transferases group 1 C6P08_08630 PF13439 Glycosyltransferase Family 4 C6P08_08630 PF00534 Glycosyl transferases group 1 C6P08_08640 PF00156 Phosphoribosyl transferase domain C6P08_08645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C6P08_08650 PF01180 Dihydroorotate dehydrogenase C6P08_08655 PF02142 MGS-like domain C6P08_08655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C6P08_08655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C6P08_08660 PF00117 Glutamine amidotransferase class-I C6P08_08660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C6P08_08665 PF01979 Amidohydrolase family C6P08_08670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C6P08_08670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C6P08_08695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C6P08_08695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C6P08_08695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C6P08_08695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C6P08_08700 PF07949 YbbR-like protein C6P08_08705 PF02457 DisA bacterial checkpoint controller nucleotide-binding C6P08_08710 PF00999 Sodium/hydrogen exchanger family C6P08_08715 PF01565 FAD binding domain C6P08_08715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C6P08_08720 PF14480 DNA polymerase III polC-type N-terminus I C6P08_08720 PF07733 Bacterial DNA polymerase III alpha NTPase domain C6P08_08720 PF11490 DNA polymerase III polC-type N-terminus II C6P08_08720 PF00929 Exonuclease C6P08_08720 PF02811 PHP domain C6P08_08720 PF14579 Helix-hairpin-helix motif C6P08_08720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C6P08_08725 PF00583 Acetyltransferase (GNAT) family C6P08_08730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C6P08_08735 PF01515 Phosphate acetyl/butaryl transferase C6P08_08740 PF03167 Uracil DNA glycosylase superfamily C6P08_08750 PF00893 Small Multidrug Resistance protein C6P08_08755 PF00893 Small Multidrug Resistance protein C6P08_08760 PF00005 ABC transporter C6P08_08765 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_08770 PF01668 SmpB protein C6P08_08775 PF17876 Cold shock domain C6P08_08775 PF00773 RNB domain C6P08_08775 PF00575 S1 RNA binding domain C6P08_08775 PF08206 Ribonuclease B OB domain C6P08_08785 PF07690 Major Facilitator Superfamily C6P08_08790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6P08_08800 PF13411 MerR HTH family regulatory protein C6P08_08805 PF03952 Enolase, N-terminal domain C6P08_08805 PF00113 Enolase, C-terminal TIM barrel domain C6P08_08820 PF00121 Triosephosphate isomerase C6P08_08825 PF02896 PEP-utilising enzyme, TIM barrel domain C6P08_08825 PF00391 PEP-utilising enzyme, mobile domain C6P08_08825 PF05524 PEP-utilising enzyme, N-terminal C6P08_08830 PF00381 PTS HPr component phosphorylation site C6P08_08840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C6P08_08840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C6P08_08845 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_08875 PF00483 Nucleotidyl transferase C6P08_08880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C6P08_08880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C6P08_08885 PF02603 HPr Serine kinase N terminus C6P08_08885 PF07475 HPr Serine kinase C-terminal domain C6P08_08900 PF00582 Universal stress protein family C6P08_08910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C6P08_08915 PF13416 Bacterial extracellular solute-binding protein C6P08_08920 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_08925 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_08930 PF00005 ABC transporter C6P08_08930 PF08402 TOBE domain C6P08_08940 PF03144 Elongation factor Tu domain 2 C6P08_08940 PF00009 Elongation factor Tu GTP binding domain C6P08_08940 PF03764 Elongation factor G, domain IV C6P08_08940 PF14492 Elongation Factor G, domain II C6P08_08940 PF00679 Elongation factor G C-terminus C6P08_08945 PF00177 Ribosomal protein S7p/S5e C6P08_08950 PF00164 Ribosomal protein S12/S23 C6P08_08965 PF12949 HeH/LEM domain C6P08_08965 PF00453 Ribosomal protein L20 C6P08_08970 PF01632 Ribosomal protein L35 C6P08_08975 PF00707 Translation initiation factor IF-3, C-terminal domain C6P08_08975 PF05198 Translation initiation factor IF-3, N-terminal domain C6P08_08980 PF01029 NusB family C6P08_08985 PF03780 Asp23 family, cell envelope-related function C6P08_08990 PF08207 Elongation factor P (EF-P) KOW-like domain C6P08_08990 PF09285 Elongation factor P, C-terminal C6P08_08990 PF01132 Elongation factor P (EF-P) OB domain C6P08_09000 PF00342 Phosphoglucose isomerase C6P08_09005 PF01263 Aldose 1-epimerase C6P08_09010 PF00480 ROK family C6P08_09015 PF06800 Sugar transport protein C6P08_09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_09020 PF00512 His Kinase A (phospho-acceptor) domain C6P08_09020 PF00672 HAMP domain C6P08_09025 PF00072 Response regulator receiver domain C6P08_09025 PF00486 Transcriptional regulatory protein, C terminal C6P08_09030 PF13538 UvrD-like helicase C-terminal domain C6P08_09035 PF07969 Amidohydrolase family C6P08_09040 PF01131 DNA topoisomerase C6P08_09040 PF13342 C-terminal repeat of topoisomerase C6P08_09040 PF01751 Toprim domain C6P08_09045 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C6P08_09050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_09050 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_09065 PF00924 Mechanosensitive ion channel C6P08_09070 PF00478 IMP dehydrogenase / GMP reductase domain C6P08_09075 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_09075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_09090 PF00106 short chain dehydrogenase C6P08_09105 PF00885 6,7-dimethyl-8-ribityllumazine synthase C6P08_09110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C6P08_09110 PF00925 GTP cyclohydrolase II C6P08_09115 PF00677 Lumazine binding domain C6P08_09120 PF01872 RibD C-terminal domain C6P08_09120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C6P08_09125 PF01610 Transposase C6P08_09125 PF13683 Integrase core domain C6P08_09135 PF03051 Peptidase C1-like family C6P08_09145 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_09150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6P08_09150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6P08_09170 PF00293 NUDIX domain C6P08_09175 PF04471 Restriction endonuclease C6P08_09175 PF14338 Mrr N-terminal domain C6P08_09185 PF02086 D12 class N6 adenine-specific DNA methyltransferase C6P08_09190 PF02517 CPBP intramembrane metalloprotease C6P08_09195 PF01979 Amidohydrolase family C6P08_09200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_09280 PF02687 FtsX-like permease family C6P08_09285 PF00005 ABC transporter C6P08_09295 PF00155 Aminotransferase class I and II C6P08_09300 PF06993 Protein of unknown function (DUF1304) C6P08_09305 PF00232 Glycosyl hydrolase family 1 C6P08_09310 PF02378 Phosphotransferase system, EIIC C6P08_09310 PF00367 phosphotransferase system, EIIB C6P08_09315 PF01966 HD domain C6P08_09315 PF00013 KH domain C6P08_09315 PF12072 Domain of unknown function (DUF3552) C6P08_09340 PF07690 Major Facilitator Superfamily C6P08_09355 PF03358 NADPH-dependent FMN reductase C6P08_09370 PF16921 Tex protein YqgF-like domain C6P08_09370 PF09371 Tex-like protein N-terminal domain C6P08_09370 PF00575 S1 RNA binding domain C6P08_09370 PF17674 HHH domain C6P08_09380 PF01053 Cys/Met metabolism PLP-dependent enzyme C6P08_09385 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C6P08_09385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C6P08_09395 PF04851 Type III restriction enzyme, res subunit C6P08_09395 PF00271 Helicase conserved C-terminal domain C6P08_09400 PF12849 PBP superfamily domain C6P08_09445 PF08032 RNA 2'-O ribose methyltransferase substrate binding C6P08_09445 PF00588 SpoU rRNA Methylase family C6P08_09465 PF00005 ABC transporter C6P08_09515 PF07733 Bacterial DNA polymerase III alpha NTPase domain C6P08_09515 PF00929 Exonuclease C6P08_09515 PF02811 PHP domain C6P08_09515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C6P08_09515 PF14480 DNA polymerase III polC-type N-terminus I C6P08_09515 PF14579 Helix-hairpin-helix motif C6P08_09515 PF11490 DNA polymerase III polC-type N-terminus II C6P08_09520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C6P08_09520 PF03129 Anticodon binding domain C6P08_09520 PF04073 Aminoacyl-tRNA editing domain C6P08_09525 PF17820 PDZ domain C6P08_09525 PF02163 Peptidase family M50 C6P08_09535 PF01255 Putative undecaprenyl diphosphate synthase C6P08_09585 PF00248 Aldo/keto reductase family C6P08_09595 PF07690 Major Facilitator Superfamily C6P08_09615 PF02645 Uncharacterised protein, DegV family COG1307 C6P08_09635 PF00709 Adenylosuccinate synthetase C6P08_09640 PF00690 Cation transporter/ATPase, N-terminus C6P08_09640 PF00689 Cation transporting ATPase, C-terminus C6P08_09645 PF00860 Permease family C6P08_09650 PF02581 Thiamine monophosphate synthase C6P08_09660 PF06160 Septation ring formation regulator, EzrA C6P08_09670 PF01757 Acyltransferase family C6P08_09675 PF00163 Ribosomal protein S4/S9 N-terminal domain C6P08_09675 PF01479 S4 domain C6P08_09690 PF01979 Amidohydrolase family C6P08_09695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C6P08_09695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C6P08_09700 PF01610 Transposase C6P08_09700 PF13683 Integrase core domain C6P08_09705 PF12704 MacB-like periplasmic core domain C6P08_09705 PF00005 ABC transporter C6P08_09705 PF02687 FtsX-like permease family C6P08_09720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C6P08_09720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C6P08_09740 PF03807 NADP oxidoreductase coenzyme F420-dependent C6P08_09740 PF14748 Pyrroline-5-carboxylate reductase dimerisation C6P08_09745 PF01098 Cell cycle protein C6P08_09760 PF08245 Mur ligase middle domain C6P08_09760 PF02875 Mur ligase family, glutamate ligase domain C6P08_09760 PF01225 Mur ligase family, catalytic domain C6P08_09770 PF13683 Integrase core domain C6P08_09770 PF01610 Transposase C6P08_09790 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_09795 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_09800 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_09805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_09805 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_09815 PF01022 Bacterial regulatory protein, arsR family C6P08_09820 PF01594 AI-2E family transporter C6P08_09825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C6P08_09825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C6P08_09830 PF01063 Amino-transferase class IV C6P08_09835 PF01906 Putative heavy-metal-binding C6P08_09840 PF00300 Histidine phosphatase superfamily (branch 1) C6P08_09850 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_09860 PF01610 Transposase C6P08_09860 PF13683 Integrase core domain C6P08_09870 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_09875 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_09880 PF08544 GHMP kinases C terminal C6P08_09880 PF00288 GHMP kinases N terminal domain C6P08_09885 PF04304 Protein of unknown function (DUF454) C6P08_09890 PF01610 Transposase C6P08_09890 PF13683 Integrase core domain C6P08_09915 PF07687 Peptidase dimerisation domain C6P08_09915 PF01546 Peptidase family M20/M25/M40 C6P08_09925 PF07690 Major Facilitator Superfamily C6P08_09930 PF00772 DnaB-like helicase N terminal domain C6P08_09930 PF03796 DnaB-like helicase C terminal domain C6P08_09935 PF01281 Ribosomal protein L9, N-terminal domain C6P08_09935 PF03948 Ribosomal protein L9, C-terminal domain C6P08_09940 PF01368 DHH family C6P08_09940 PF02272 DHHA1 domain C6P08_09945 PF00005 ABC transporter C6P08_09945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6P08_09950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C6P08_09950 PF00005 ABC transporter C6P08_09955 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_09955 PF12911 N-terminal TM domain of oligopeptide transport permease C C6P08_09960 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_09965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C6P08_09975 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_09980 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_09985 PF07662 Na+ dependent nucleoside transporter C-terminus C6P08_09985 PF01773 Na+ dependent nucleoside transporter N-terminus C6P08_10010 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C6P08_10015 PF00294 pfkB family carbohydrate kinase C6P08_10015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C6P08_10020 PF00356 Bacterial regulatory proteins, lacI family C6P08_10025 PF07690 Major Facilitator Superfamily C6P08_10035 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_10040 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_10045 PF00497 Bacterial extracellular solute-binding proteins, family 3 C6P08_10050 PF00005 ABC transporter C6P08_10065 PF00625 Guanylate kinase C6P08_10070 PF02632 BioY family C6P08_10075 PF02237 Biotin protein ligase C terminal domain C6P08_10075 PF03099 Biotin/lipoate A/B protein ligase family C6P08_10075 PF08279 HTH domain C6P08_10095 PF01546 Peptidase family M20/M25/M40 C6P08_10105 PF01256 Carbohydrate kinase C6P08_10110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C6P08_10110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C6P08_10120 PF00579 tRNA synthetases class I (W and Y) C6P08_10125 PF13538 UvrD-like helicase C-terminal domain C6P08_10130 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_10130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_10135 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C6P08_10140 PF01168 Alanine racemase, N-terminal domain C6P08_10140 PF00842 Alanine racemase, C-terminal domain C6P08_10145 PF00270 DEAD/DEAH box helicase C6P08_10145 PF00271 Helicase conserved C-terminal domain C6P08_10180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C6P08_10190 PF00117 Glutamine amidotransferase class-I C6P08_10190 PF06418 CTP synthase N-terminus C6P08_10220 PF05066 HB1, ASXL, restriction endonuclease HTH domain C6P08_10230 PF01966 HD domain C6P08_10240 PF13180 PDZ domain C6P08_10245 PF00753 Metallo-beta-lactamase superfamily C6P08_10260 PF00672 HAMP domain C6P08_10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_10260 PF00989 PAS fold C6P08_10260 PF00512 His Kinase A (phospho-acceptor) domain C6P08_10265 PF00072 Response regulator receiver domain C6P08_10265 PF00486 Transcriptional regulatory protein, C terminal C6P08_10295 PF01084 Ribosomal protein S18 C6P08_10300 PF00436 Single-strand binding protein family C6P08_10305 PF01250 Ribosomal protein S6 C6P08_10310 PF01156 Inosine-uridine preferring nucleoside hydrolase C6P08_10315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C6P08_10315 PF14572 Phosphoribosyl synthetase-associated domain C6P08_10320 PF00132 Bacterial transferase hexapeptide (six repeats) C6P08_10320 PF12804 MobA-like NTP transferase domain C6P08_10325 PF00156 Phosphoribosyl transferase domain C6P08_10325 PF09182 Bacterial purine repressor, N-terminal C6P08_10330 PF00293 NUDIX domain C6P08_10335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C6P08_10335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C6P08_10340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6P08_10340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6P08_10345 PF07690 Major Facilitator Superfamily C6P08_10350 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_10350 PF00107 Zinc-binding dehydrogenase C6P08_10355 PF13361 UvrD-like helicase C-terminal domain C6P08_10355 PF12705 PD-(D/E)XK nuclease superfamily C6P08_10355 PF00580 UvrD/REP helicase N-terminal domain C6P08_10360 PF12705 PD-(D/E)XK nuclease superfamily C6P08_10365 PF01546 Peptidase family M20/M25/M40 C6P08_10370 PF13520 Amino acid permease C6P08_10380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C6P08_10380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6P08_10390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C6P08_10395 PF01053 Cys/Met metabolism PLP-dependent enzyme C6P08_10405 PF01943 Polysaccharide biosynthesis protein C6P08_10405 PF14667 Polysaccharide biosynthesis C-terminal domain C6P08_10415 PF00534 Glycosyl transferases group 1 C6P08_10415 PF13439 Glycosyltransferase Family 4 C6P08_10420 PF08264 Anticodon-binding domain of tRNA C6P08_10420 PF09334 tRNA synthetases class I (M) C6P08_10420 PF13603 Leucyl-tRNA synthetase, Domain 2 C6P08_10420 PF00133 tRNA synthetases class I (I, L, M and V) C6P08_10425 PF01569 PAP2 superfamily C6P08_10435 PF01938 TRAM domain C6P08_10435 PF05958 tRNA (Uracil-5-)-methyltransferase C6P08_10450 PF01641 SelR domain C6P08_10455 PF04138 GtrA-like protein C6P08_10460 PF02608 ABC transporter substrate-binding protein PnrA-like C6P08_10475 PF13635 Domain of unknown function (DUF4143) C6P08_10475 PF13173 AAA domain C6P08_10485 PF00438 S-adenosylmethionine synthetase, N-terminal domain C6P08_10485 PF02772 S-adenosylmethionine synthetase, central domain C6P08_10485 PF02773 S-adenosylmethionine synthetase, C-terminal domain C6P08_10495 PF00557 Metallopeptidase family M24 C6P08_10505 PF01625 Peptide methionine sulfoxide reductase C6P08_10510 PF00149 Calcineurin-like phosphoesterase C6P08_10510 PF02872 5'-nucleotidase, C-terminal domain C6P08_10515 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_10520 PF00528 Binding-protein-dependent transport system inner membrane component C6P08_10525 PF00005 ABC transporter C6P08_10535 PF00107 Zinc-binding dehydrogenase C6P08_10535 PF08240 Alcohol dehydrogenase GroES-like domain C6P08_10540 PF00265 Thymidine kinase C6P08_10550 PF03816 Cell envelope-related transcriptional attenuator domain C6P08_10560 PF00512 His Kinase A (phospho-acceptor) domain C6P08_10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_10565 PF00486 Transcriptional regulatory protein, C terminal C6P08_10565 PF00072 Response regulator receiver domain C6P08_10585 PF01566 Natural resistance-associated macrophage protein C6P08_10590 PF00155 Aminotransferase class I and II C6P08_10595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C6P08_10595 PF01502 Phosphoribosyl-AMP cyclohydrolase C6P08_10600 PF00977 Histidine biosynthesis protein C6P08_10605 PF00977 Histidine biosynthesis protein C6P08_10610 PF00117 Glutamine amidotransferase class-I C6P08_10615 PF00475 Imidazoleglycerol-phosphate dehydratase C6P08_10620 PF00815 Histidinol dehydrogenase C6P08_10625 PF01634 ATP phosphoribosyltransferase C6P08_10630 PF02811 PHP domain C6P08_10705 PF00534 Glycosyl transferases group 1 C6P08_10710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C6P08_10710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6P08_10720 PF02652 L-lactate permease C6P08_10725 PF00248 Aldo/keto reductase family C6P08_10730 PF00156 Phosphoribosyl transferase domain C6P08_10735 PF00860 Permease family C6P08_10745 PF13683 Integrase core domain C6P08_10745 PF01610 Transposase C6P08_10750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C6P08_10750 PF07992 Pyridine nucleotide-disulphide oxidoreductase C6P08_10755 PF13185 GAF domain C6P08_10775 PF01063 Amino-transferase class IV C6P08_10780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C6P08_10780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C6P08_10785 PF00535 Glycosyl transferase family 2 C6P08_10805 PF00579 tRNA synthetases class I (W and Y) C6P08_10805 PF01479 S4 domain C6P08_10820 PF13460 NAD(P)H-binding C6P08_10840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C6P08_10840 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C6P08_10845 PF01418 Helix-turn-helix domain, rpiR family C6P08_10845 PF01380 SIS domain C6P08_10855 PF00248 Aldo/keto reductase family C6P08_10860 PF04226 Transglycosylase associated protein C6P08_10925 PF00152 tRNA synthetases class II (D, K and N) C6P08_10925 PF01336 OB-fold nucleic acid binding domain C6P08_10930 PF01430 Hsp33 protein C6P08_10935 PF01434 Peptidase family M41 C6P08_10935 PF17862 AAA+ lid domain C6P08_10935 PF00004 ATPase family associated with various cellular activities (AAA) C6P08_10935 PF06480 FtsH Extracellular C6P08_10945 PF11734 TilS substrate C-terminal domain C6P08_10945 PF01171 PP-loop family C6P08_10955 PF01479 S4 domain C6P08_10960 PF14667 Polysaccharide biosynthesis C-terminal domain C6P08_10960 PF01943 Polysaccharide biosynthesis protein C6P08_10965 PF03461 TRCF domain C6P08_10965 PF00271 Helicase conserved C-terminal domain C6P08_10965 PF00270 DEAD/DEAH box helicase C6P08_10965 PF02559 CarD-like/TRCF domain C6P08_10965 PF17757 UvrB interaction domain C6P08_10970 PF01195 Peptidyl-tRNA hydrolase C6P08_10980 PF02903 Alpha amylase, N-terminal ig-like domain C6P08_10980 PF00128 Alpha amylase, catalytic domain C6P08_10985 PF00343 Carbohydrate phosphorylase C6P08_10990 PF08323 Starch synthase catalytic domain C6P08_10990 PF00534 Glycosyl transferases group 1 C6P08_10995 PF00483 Nucleotidyl transferase C6P08_11000 PF00132 Bacterial transferase hexapeptide (six repeats) C6P08_11000 PF00483 Nucleotidyl transferase C6P08_11005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C6P08_11005 PF00128 Alpha amylase, catalytic domain C6P08_11005 PF02806 Alpha amylase, C-terminal all-beta domain C6P08_11015 PF00440 Bacterial regulatory proteins, tetR family C6P08_11030 PF02378 Phosphotransferase system, EIIC C6P08_11035 PF07690 Major Facilitator Superfamily C6P08_11045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C6P08_11045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C6P08_11055 PF00480 ROK family C6P08_11065 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C6P08_11065 PF04616 Glycosyl hydrolases family 43 C6P08_11070 PF00083 Sugar (and other) transporter C6P08_11090 PF02673 Bacitracin resistance protein BacA C6P08_11105 PF03551 Transcriptional regulator PadR-like family C6P08_11110 PF04024 PspC domain C6P08_11115 PF07662 Na+ dependent nucleoside transporter C-terminus C6P08_11115 PF01773 Na+ dependent nucleoside transporter N-terminus C6P08_11120 PF03816 Cell envelope-related transcriptional attenuator domain C6P08_11125 PF00303 Thymidylate synthase C6P08_11130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C6P08_11135 PF06257 Biofilm formation stimulator VEG C6P08_11140 PF00571 CBS domain C6P08_11140 PF01595 Cyclin M transmembrane N-terminal domain C6P08_11140 PF03471 Transporter associated domain C6P08_11145 PF01595 Cyclin M transmembrane N-terminal domain C6P08_11145 PF03471 Transporter associated domain C6P08_11145 PF00571 CBS domain C6P08_11150 PF00398 Ribosomal RNA adenine dimethylase C6P08_11155 PF13331 Domain of unknown function (DUF4093) C6P08_11160 PF01026 TatD related DNase C6P08_11165 PF13276 HTH-like domain C6P08_11165 PF13333 Integrase core domain C6P08_11165 PF00665 Integrase core domain C6P08_11175 PF00999 Sodium/hydrogen exchanger family C6P08_11180 PF09334 tRNA synthetases class I (M) C6P08_11180 PF08264 Anticodon-binding domain of tRNA C6P08_11180 PF01588 Putative tRNA binding domain C6P08_11210 PF02146 Sir2 family C6P08_11220 PF00368 Hydroxymethylglutaryl-coenzyme A reductase C6P08_11225 PF02607 B12 binding domain C6P08_11225 PF13411 MerR HTH family regulatory protein C6P08_11230 PF00884 Sulfatase C6P08_11235 PF13673 Acetyltransferase (GNAT) domain C6P08_11245 PF00521 DNA gyrase/topoisomerase IV, subunit A C6P08_11245 PF03989 DNA gyrase C-terminal domain, beta-propeller C6P08_11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C6P08_11250 PF00204 DNA gyrase B C6P08_11250 PF01751 Toprim domain C6P08_11250 PF00986 DNA gyrase B subunit, carboxyl terminus C6P08_11255 PF02463 RecF/RecN/SMC N terminal domain C6P08_11265 PF02767 DNA polymerase III beta subunit, central domain C6P08_11265 PF02768 DNA polymerase III beta subunit, C-terminal domain C6P08_11265 PF00712 DNA polymerase III beta subunit, N-terminal domain C6P08_11275 PF00589 Phage integrase family C6P08_11290 PF00005 ABC transporter C6P08_11295 PF01381 Helix-turn-helix C6P08_11300 PF00403 Heavy-metal-associated domain C6P08_11315 PF01051 Initiator Replication protein C6P08_11345 PF03780 Asp23 family, cell envelope-related function C6P08_11360 PF04226 Transglycosylase associated protein