locus-tag class description EFA59_00005 PF11638 DnaA N-terminal domain EFA59_00005 PF08299 Bacterial dnaA protein helix-turn-helix EFA59_00005 PF00308 Bacterial dnaA protein EFA59_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EFA59_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EFA59_00010 PF02767 DNA polymerase III beta subunit, central domain EFA59_00020 PF02463 RecF/RecN/SMC N terminal domain EFA59_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_00025 PF01751 Toprim domain EFA59_00025 PF00986 DNA gyrase B subunit, carboxyl terminus EFA59_00025 PF00204 DNA gyrase B EFA59_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller EFA59_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A EFA59_00035 PF00106 short chain dehydrogenase EFA59_00040 PF00005 ABC transporter EFA59_00040 PF09383 NIL domain EFA59_00045 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_00050 PF03180 NLPA lipoprotein EFA59_00060 PF03176 MMPL family EFA59_00070 PF13673 Acetyltransferase (GNAT) domain EFA59_00075 PF00884 Sulfatase EFA59_00085 PF00368 Hydroxymethylglutaryl-coenzyme A reductase EFA59_00095 PF02146 Sir2 family EFA59_00135 PF00999 Sodium/hydrogen exchanger family EFA59_00140 PF01026 TatD related DNase EFA59_00145 PF13331 Domain of unknown function (DUF4093) EFA59_00150 PF00398 Ribosomal RNA adenine dimethylase EFA59_00155 PF00571 CBS domain EFA59_00155 PF01595 Cyclin M transmembrane N-terminal domain EFA59_00155 PF03471 Transporter associated domain EFA59_00160 PF03471 Transporter associated domain EFA59_00160 PF00571 CBS domain EFA59_00160 PF01595 Cyclin M transmembrane N-terminal domain EFA59_00165 PF06257 Biofilm formation stimulator VEG EFA59_00170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EFA59_00175 PF00303 Thymidylate synthase EFA59_00180 PF03816 Cell envelope-related transcriptional attenuator domain EFA59_00215 PF00005 ABC transporter EFA59_00220 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_00225 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_00230 PF00149 Calcineurin-like phosphoesterase EFA59_00230 PF02872 5'-nucleotidase, C-terminal domain EFA59_00285 PF00005 ABC transporter EFA59_00300 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EFA59_00300 PF00294 pfkB family carbohydrate kinase EFA59_00340 PF01943 Polysaccharide biosynthesis protein EFA59_00365 PF03741 Integral membrane protein TerC family EFA59_00370 PF01425 Amidase EFA59_00375 PF01195 Peptidyl-tRNA hydrolase EFA59_00380 PF00270 DEAD/DEAH box helicase EFA59_00380 PF00271 Helicase conserved C-terminal domain EFA59_00380 PF03461 TRCF domain EFA59_00380 PF17757 UvrB interaction domain EFA59_00380 PF02559 CarD-like/TRCF domain EFA59_00385 PF14667 Polysaccharide biosynthesis C-terminal domain EFA59_00385 PF01943 Polysaccharide biosynthesis protein EFA59_00390 PF01479 S4 domain EFA59_00400 PF01171 PP-loop family EFA59_00405 PF11734 TilS substrate C-terminal domain EFA59_00405 PF00156 Phosphoribosyl transferase domain EFA59_00405 PF01171 PP-loop family EFA59_00410 PF17862 AAA+ lid domain EFA59_00410 PF01434 Peptidase family M41 EFA59_00410 PF00004 ATPase family associated with various cellular activities (AAA) EFA59_00410 PF06480 FtsH Extracellular EFA59_00415 PF01430 Hsp33 protein EFA59_00420 PF00152 tRNA synthetases class II (D, K and N) EFA59_00420 PF01336 OB-fold nucleic acid binding domain EFA59_00460 PF00589 Phage integrase family EFA59_00460 PF02899 Phage integrase, N-terminal SAM-like domain EFA59_00565 PF01555 DNA methylase EFA59_00565 PF18755 Restriction Enzyme Adenine Methylase Associated EFA59_00730 PF01047 MarR family EFA59_00735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_00735 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_00740 PF00107 Zinc-binding dehydrogenase EFA59_00740 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_00745 PF06993 Protein of unknown function (DUF1304) EFA59_00755 PF13089 Polyphosphate kinase N-terminal domain EFA59_00755 PF02503 Polyphosphate kinase middle domain EFA59_00755 PF13090 Polyphosphate kinase C-terminal domain 2 EFA59_00755 PF17941 Polyphosphate kinase C-terminal domain 1 EFA59_00780 PF03466 LysR substrate binding domain EFA59_00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EFA59_00785 PF03949 Malic enzyme, NAD binding domain EFA59_00785 PF00390 Malic enzyme, N-terminal domain EFA59_00800 PF04226 Transglycosylase associated protein EFA59_00810 PF01418 Helix-turn-helix domain, rpiR family EFA59_00810 PF01380 SIS domain EFA59_00815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EFA59_00815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EFA59_00820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_00820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_00825 PF01479 S4 domain EFA59_00825 PF00579 tRNA synthetases class I (W and Y) EFA59_00830 PF01063 Amino-transferase class IV EFA59_00840 PF00085 Thioredoxin EFA59_00845 PF13185 GAF domain EFA59_00850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_00855 PF07690 Major Facilitator Superfamily EFA59_00860 PF00860 Permease family EFA59_00865 PF00156 Phosphoribosyl transferase domain EFA59_00870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EFA59_00870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EFA59_00875 PF00534 Glycosyl transferases group 1 EFA59_00945 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_00950 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_00960 PF02929 Beta galactosidase small chain EFA59_00960 PF16353 Domain of unknown function(DUF4981) EFA59_00960 PF00703 Glycosyl hydrolases family 2 EFA59_00960 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EFA59_00960 PF02837 Glycosyl hydrolases family 2, sugar binding domain EFA59_00965 PF03459 TOBE domain EFA59_00965 PF00005 ABC transporter EFA59_00965 PF17912 MalK OB fold domain EFA59_00970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EFA59_00970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EFA59_00975 PF01053 Cys/Met metabolism PLP-dependent enzyme EFA59_00980 PF16363 GDP-mannose 4,6 dehydratase EFA59_00985 PF00248 Aldo/keto reductase family EFA59_00995 PF04203 Sortase domain EFA59_01000 PF13460 NAD(P)H-binding EFA59_01005 PF01638 HxlR-like helix-turn-helix EFA59_01010 PF01965 DJ-1/PfpI family EFA59_01015 PF00356 Bacterial regulatory proteins, lacI family EFA59_01020 PF02449 Beta-galactosidase EFA59_01020 PF08532 Beta-galactosidase trimerisation domain EFA59_01020 PF08533 Beta-galactosidase C-terminal domain EFA59_01025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_01035 PF00438 S-adenosylmethionine synthetase, N-terminal domain EFA59_01035 PF02772 S-adenosylmethionine synthetase, central domain EFA59_01035 PF02773 S-adenosylmethionine synthetase, C-terminal domain EFA59_01040 PF03610 PTS system fructose IIA component EFA59_01045 PF02733 Dak1 domain EFA59_01050 PF02734 DAK2 domain EFA59_01055 PF01380 SIS domain EFA59_01055 PF01418 Helix-turn-helix domain, rpiR family EFA59_01060 PF00367 phosphotransferase system, EIIB EFA59_01060 PF02378 Phosphotransferase system, EIIC EFA59_01065 PF01380 SIS domain EFA59_01070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EFA59_01070 PF00205 Thiamine pyrophosphate enzyme, central domain EFA59_01070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EFA59_01080 PF01116 Fructose-bisphosphate aldolase class-II EFA59_01095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EFA59_01100 PF00255 Glutathione peroxidase EFA59_01105 PF00107 Zinc-binding dehydrogenase EFA59_01105 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_01110 PF03358 NADPH-dependent FMN reductase EFA59_01115 PF07690 Major Facilitator Superfamily EFA59_01120 PF05958 tRNA (Uracil-5-)-methyltransferase EFA59_01120 PF01938 TRAM domain EFA59_01125 PF00356 Bacterial regulatory proteins, lacI family EFA59_01130 PF01306 LacY proton/sugar symporter EFA59_01135 PF00251 Glycosyl hydrolases family 32 N-terminal domain EFA59_01135 PF08244 Glycosyl hydrolases family 32 C terminal EFA59_01140 PF00480 ROK family EFA59_01150 PF01569 PAP2 superfamily EFA59_01155 PF08264 Anticodon-binding domain of tRNA EFA59_01155 PF00133 tRNA synthetases class I (I, L, M and V) EFA59_01155 PF13603 Leucyl-tRNA synthetase, Domain 2 EFA59_01155 PF09334 tRNA synthetases class I (M) EFA59_01165 PF01943 Polysaccharide biosynthesis protein EFA59_01165 PF14667 Polysaccharide biosynthesis C-terminal domain EFA59_01190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EFA59_01190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EFA59_01195 PF13520 Amino acid permease EFA59_01200 PF01546 Peptidase family M20/M25/M40 EFA59_01205 PF12705 PD-(D/E)XK nuclease superfamily EFA59_01210 PF00580 UvrD/REP helicase N-terminal domain EFA59_01210 PF12705 PD-(D/E)XK nuclease superfamily EFA59_01210 PF13361 UvrD-like helicase C-terminal domain EFA59_01215 PF07690 Major Facilitator Superfamily EFA59_01220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_01220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_01225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EFA59_01225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EFA59_01230 PF00293 NUDIX domain EFA59_01235 PF00156 Phosphoribosyl transferase domain EFA59_01235 PF09182 Bacterial purine repressor, N-terminal EFA59_01240 PF12804 MobA-like NTP transferase domain EFA59_01240 PF00132 Bacterial transferase hexapeptide (six repeats) EFA59_01245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EFA59_01245 PF14572 Phosphoribosyl synthetase-associated domain EFA59_01250 PF01156 Inosine-uridine preferring nucleoside hydrolase EFA59_01255 PF01250 Ribosomal protein S6 EFA59_01260 PF00436 Single-strand binding protein family EFA59_01265 PF01084 Ribosomal protein S18 EFA59_01285 PF00571 CBS domain EFA59_01285 PF00478 IMP dehydrogenase / GMP reductase domain EFA59_01290 PF00478 IMP dehydrogenase / GMP reductase domain EFA59_01290 PF00571 CBS domain EFA59_01300 PF00486 Transcriptional regulatory protein, C terminal EFA59_01300 PF00072 Response regulator receiver domain EFA59_01305 PF00512 His Kinase A (phospho-acceptor) domain EFA59_01305 PF13426 PAS domain EFA59_01305 PF00672 HAMP domain EFA59_01305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_01305 PF14827 Double sensory domain of two-component sensor kinase EFA59_01320 PF00753 Metallo-beta-lactamase superfamily EFA59_01325 PF13180 PDZ domain EFA59_01335 PF01966 HD domain EFA59_01345 PF05066 HB1, ASXL, restriction endonuclease HTH domain EFA59_01350 PF06418 CTP synthase N-terminus EFA59_01350 PF00117 Glutamine amidotransferase class-I EFA59_01355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EFA59_01360 PF00270 DEAD/DEAH box helicase EFA59_01360 PF00271 Helicase conserved C-terminal domain EFA59_01365 PF01168 Alanine racemase, N-terminal domain EFA59_01365 PF00842 Alanine racemase, C-terminal domain EFA59_01370 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EFA59_01375 PF13538 UvrD-like helicase C-terminal domain EFA59_01380 PF00579 tRNA synthetases class I (W and Y) EFA59_01390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EFA59_01390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EFA59_01395 PF01256 Carbohydrate kinase EFA59_01400 PF01546 Peptidase family M20/M25/M40 EFA59_01405 PF00625 Guanylate kinase EFA59_01420 PF00005 ABC transporter EFA59_01425 PF00497 Bacterial extracellular solute-binding proteins, family 3 EFA59_01430 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_01435 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_01440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EFA59_01445 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_01450 PF12911 N-terminal TM domain of oligopeptide transport permease C EFA59_01450 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_01455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EFA59_01455 PF00005 ABC transporter EFA59_01460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EFA59_01460 PF00005 ABC transporter EFA59_01465 PF02272 DHHA1 domain EFA59_01465 PF01368 DHH family EFA59_01470 PF03948 Ribosomal protein L9, C-terminal domain EFA59_01470 PF01281 Ribosomal protein L9, N-terminal domain EFA59_01475 PF00772 DnaB-like helicase N terminal domain EFA59_01475 PF03796 DnaB-like helicase C terminal domain EFA59_01480 PF07690 Major Facilitator Superfamily EFA59_01485 PF07687 Peptidase dimerisation domain EFA59_01485 PF01546 Peptidase family M20/M25/M40 EFA59_01490 PF04304 Protein of unknown function (DUF454) EFA59_01495 PF00288 GHMP kinases N terminal domain EFA59_01495 PF08544 GHMP kinases C terminal EFA59_01500 PF02608 ABC transporter substrate-binding protein PnrA-like EFA59_01505 PF07690 Major Facilitator Superfamily EFA59_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_01520 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_01570 PF00005 ABC transporter EFA59_01580 PF00440 Bacterial regulatory proteins, tetR family EFA59_01580 PF16295 Tetracyclin repressor-like, C-terminal domain EFA59_01585 PF00199 Catalase EFA59_01585 PF06628 Catalase-related immune-responsive EFA59_01590 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_01590 PF00107 Zinc-binding dehydrogenase EFA59_01595 PF00356 Bacterial regulatory proteins, lacI family EFA59_01600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_01605 PF16875 Glycosyl hydrolase family 36 N-terminal domain EFA59_01605 PF16874 Glycosyl hydrolase family 36 C-terminal domain EFA59_01620 PF02447 GntP family permease EFA59_01625 PF01594 AI-2E family transporter EFA59_01630 PF02608 ABC transporter substrate-binding protein PnrA-like EFA59_01655 PF01225 Mur ligase family, catalytic domain EFA59_01655 PF02875 Mur ligase family, glutamate ligase domain EFA59_01655 PF08245 Mur ligase middle domain EFA59_01670 PF01098 Cell cycle protein EFA59_01675 PF14748 Pyrroline-5-carboxylate reductase dimerisation EFA59_01675 PF03807 NADP oxidoreductase coenzyme F420-dependent EFA59_01685 PF11838 ERAP1-like C-terminal domain EFA59_01685 PF01433 Peptidase family M1 domain EFA59_01695 PF00005 ABC transporter EFA59_01695 PF02687 FtsX-like permease family EFA59_01695 PF12704 MacB-like periplasmic core domain EFA59_01700 PF01979 Amidohydrolase family EFA59_01710 PF01479 S4 domain EFA59_01710 PF00163 Ribosomal protein S4/S9 N-terminal domain EFA59_01715 PF06160 Septation ring formation regulator, EzrA EFA59_01720 PF00689 Cation transporting ATPase, C-terminus EFA59_01720 PF00690 Cation transporter/ATPase, N-terminus EFA59_01725 PF00709 Adenylosuccinate synthetase EFA59_01735 PF16916 Dimerisation domain of Zinc Transporter EFA59_01735 PF01545 Cation efflux family EFA59_01740 PF01022 Bacterial regulatory protein, arsR family EFA59_01750 PF04138 GtrA-like protein EFA59_01760 PF01255 Putative undecaprenyl diphosphate synthase EFA59_01770 PF02163 Peptidase family M50 EFA59_01770 PF17820 PDZ domain EFA59_01775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EFA59_01775 PF03129 Anticodon binding domain EFA59_01775 PF04073 Aminoacyl-tRNA editing domain EFA59_01780 PF11490 DNA polymerase III polC-type N-terminus II EFA59_01780 PF07733 Bacterial DNA polymerase III alpha NTPase domain EFA59_01780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EFA59_01780 PF14579 Helix-hairpin-helix motif EFA59_01780 PF02811 PHP domain EFA59_01780 PF00929 Exonuclease EFA59_01780 PF14480 DNA polymerase III polC-type N-terminus I EFA59_01800 PF08032 RNA 2'-O ribose methyltransferase substrate binding EFA59_01800 PF00588 SpoU rRNA Methylase family EFA59_01835 PF04851 Type III restriction enzyme, res subunit EFA59_01835 PF00271 Helicase conserved C-terminal domain EFA59_01845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EFA59_01845 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EFA59_01855 PF16921 Tex protein YqgF-like domain EFA59_01855 PF09371 Tex-like protein N-terminal domain EFA59_01855 PF00575 S1 RNA binding domain EFA59_01855 PF17674 HHH domain EFA59_01890 PF01966 HD domain EFA59_01890 PF12072 Domain of unknown function (DUF3552) EFA59_01890 PF00013 KH domain EFA59_01900 PF00005 ABC transporter EFA59_01910 PF00480 ROK family EFA59_01925 PF03051 Peptidase C1-like family EFA59_01950 PF03780 Asp23 family, cell envelope-related function EFA59_01955 PF00291 Pyridoxal-phosphate dependent enzyme EFA59_01960 PF00132 Bacterial transferase hexapeptide (six repeats) EFA59_01960 PF06426 Serine acetyltransferase, N-terminal EFA59_01965 PF00589 Phage integrase family EFA59_01965 PF14659 Phage integrase, N-terminal SAM-like domain EFA59_01970 PF06993 Protein of unknown function (DUF1304) EFA59_02015 PF04226 Transglycosylase associated protein EFA59_02025 PF03073 TspO/MBR family EFA59_02050 PF00478 IMP dehydrogenase / GMP reductase domain EFA59_02055 PF00924 Mechanosensitive ion channel EFA59_02060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EFA59_02070 PF07969 Amidohydrolase family EFA59_02075 PF00486 Transcriptional regulatory protein, C terminal EFA59_02075 PF00072 Response regulator receiver domain EFA59_02080 PF00672 HAMP domain EFA59_02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_02080 PF00512 His Kinase A (phospho-acceptor) domain EFA59_02085 PF01263 Aldose 1-epimerase EFA59_02090 PF00342 Phosphoglucose isomerase EFA59_02095 PF01132 Elongation factor P (EF-P) OB domain EFA59_02095 PF08207 Elongation factor P (EF-P) KOW-like domain EFA59_02095 PF09285 Elongation factor P, C-terminal EFA59_02100 PF03780 Asp23 family, cell envelope-related function EFA59_02105 PF01029 NusB family EFA59_02110 PF05198 Translation initiation factor IF-3, N-terminal domain EFA59_02110 PF00707 Translation initiation factor IF-3, C-terminal domain EFA59_02115 PF01632 Ribosomal protein L35 EFA59_02120 PF12949 HeH/LEM domain EFA59_02120 PF00453 Ribosomal protein L20 EFA59_02130 PF00164 Ribosomal protein S12/S23 EFA59_02135 PF00177 Ribosomal protein S7p/S5e EFA59_02140 PF00679 Elongation factor G C-terminus EFA59_02140 PF03144 Elongation factor Tu domain 2 EFA59_02140 PF00009 Elongation factor Tu GTP binding domain EFA59_02140 PF03764 Elongation factor G, domain IV EFA59_02140 PF14492 Elongation Factor G, domain II EFA59_02145 PF08402 TOBE domain EFA59_02145 PF00005 ABC transporter EFA59_02150 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02155 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02160 PF13416 Bacterial extracellular solute-binding protein EFA59_02165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EFA59_02175 PF00582 Universal stress protein family EFA59_02190 PF02603 HPr Serine kinase N terminus EFA59_02190 PF07475 HPr Serine kinase C-terminal domain EFA59_02195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EFA59_02195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EFA59_02200 PF00483 Nucleotidyl transferase EFA59_02205 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_02210 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_02215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EFA59_02215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EFA59_02225 PF00381 PTS HPr component phosphorylation site EFA59_02230 PF05524 PEP-utilising enzyme, N-terminal EFA59_02230 PF00391 PEP-utilising enzyme, mobile domain EFA59_02230 PF02896 PEP-utilising enzyme, TIM barrel domain EFA59_02245 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02250 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02255 PF00005 ABC transporter EFA59_02255 PF17912 MalK OB fold domain EFA59_02255 PF03459 TOBE domain EFA59_02260 PF02903 Alpha amylase, N-terminal ig-like domain EFA59_02260 PF16657 Maltogenic Amylase, C-terminal domain EFA59_02260 PF00128 Alpha amylase, catalytic domain EFA59_02265 PF00121 Triosephosphate isomerase EFA59_02275 PF00113 Enolase, C-terminal TIM barrel domain EFA59_02275 PF03952 Enolase, N-terminal domain EFA59_02285 PF17876 Cold shock domain EFA59_02285 PF00575 S1 RNA binding domain EFA59_02285 PF00773 RNB domain EFA59_02285 PF08206 Ribonuclease B OB domain EFA59_02290 PF01668 SmpB protein EFA59_02295 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02300 PF00005 ABC transporter EFA59_02310 PF03167 Uracil DNA glycosylase superfamily EFA59_02315 PF01515 Phosphate acetyl/butaryl transferase EFA59_02325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EFA59_02330 PF00583 Acetyltransferase (GNAT) family EFA59_02335 PF11490 DNA polymerase III polC-type N-terminus II EFA59_02335 PF07733 Bacterial DNA polymerase III alpha NTPase domain EFA59_02335 PF14480 DNA polymerase III polC-type N-terminus I EFA59_02335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EFA59_02335 PF14579 Helix-hairpin-helix motif EFA59_02335 PF02811 PHP domain EFA59_02335 PF00929 Exonuclease EFA59_02340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EFA59_02340 PF01565 FAD binding domain EFA59_02345 PF00999 Sodium/hydrogen exchanger family EFA59_02350 PF02457 DisA bacterial checkpoint controller nucleotide-binding EFA59_02355 PF07949 YbbR-like protein EFA59_02360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EFA59_02360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EFA59_02360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EFA59_02360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EFA59_02370 PF00534 Glycosyl transferases group 1 EFA59_02370 PF13439 Glycosyltransferase Family 4 EFA59_02375 PF00534 Glycosyl transferases group 1 EFA59_02375 PF13439 Glycosyltransferase Family 4 EFA59_02390 PF00884 Sulfatase EFA59_02450 PF03830 PTS system sorbose subfamily IIB component EFA59_02450 PF03610 PTS system fructose IIA component EFA59_02455 PF03609 PTS system sorbose-specific iic component EFA59_02460 PF03613 PTS system mannose/fructose/sorbose family IID component EFA59_02470 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_02475 PF01223 DNA/RNA non-specific endonuclease EFA59_02480 PF14659 Phage integrase, N-terminal SAM-like domain EFA59_02480 PF00589 Phage integrase family EFA59_02550 PF01381 Helix-turn-helix EFA59_02575 PF00436 Single-strand binding protein family EFA59_02650 PF10668 Phage terminase small subunit EFA59_02650 PF03592 Terminase small subunit EFA59_02655 PF17288 Terminase RNAseH like domain EFA59_02655 PF04466 Phage terminase large subunit EFA59_02785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EFA59_02785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EFA59_02790 PF00162 Phosphoglycerate kinase EFA59_02795 PF03466 LysR substrate binding domain EFA59_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EFA59_02805 PF02110 Hydroxyethylthiazole kinase family EFA59_02810 PF02581 Thiamine monophosphate synthase EFA59_02815 PF00571 CBS domain EFA59_02815 PF00005 ABC transporter EFA59_02820 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_02825 PF13396 Phospholipase_D-nuclease N-terminal EFA59_02825 PF13091 PLD-like domain EFA59_02835 PF00009 Elongation factor Tu GTP binding domain EFA59_02835 PF00679 Elongation factor G C-terminus EFA59_02835 PF03144 Elongation factor Tu domain 2 EFA59_02835 PF06421 GTP-binding protein LepA C-terminus EFA59_02840 PF01197 Ribosomal protein L31 EFA59_02850 PF13456 Reverse transcriptase-like EFA59_02860 PF01479 S4 domain EFA59_02860 PF00849 RNA pseudouridylate synthase EFA59_02865 PF00156 Phosphoribosyl transferase domain EFA59_02870 PF00117 Glutamine amidotransferase class-I EFA59_02870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EFA59_02875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EFA59_02875 PF02142 MGS-like domain EFA59_02875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EFA59_02885 PF10397 Adenylosuccinate lyase C-terminus EFA59_02885 PF00206 Lyase EFA59_02895 PF03949 Malic enzyme, NAD binding domain EFA59_02895 PF00390 Malic enzyme, N-terminal domain EFA59_02905 PF08218 Citrate lyase ligase C-terminal domain EFA59_02910 PF06857 Malonate decarboxylase delta subunit (MdcD) EFA59_02915 PF03328 HpcH/HpaI aldolase/citrate lyase family EFA59_02920 PF04223 Citrate lyase, alpha subunit (CitF) EFA59_02925 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EFA59_02925 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EFA59_02935 PF12697 Alpha/beta hydrolase family EFA59_02945 PF07977 FabA-like domain EFA59_02950 PF01047 MarR family EFA59_02955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EFA59_02955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EFA59_02960 PF00550 Phosphopantetheine attachment site EFA59_02965 PF03060 Nitronate monooxygenase EFA59_02970 PF00698 Acyl transferase domain EFA59_02980 PF00109 Beta-ketoacyl synthase, N-terminal domain EFA59_02980 PF02801 Beta-ketoacyl synthase, C-terminal domain EFA59_02985 PF00364 Biotin-requiring enzyme EFA59_02990 PF07977 FabA-like domain EFA59_02995 PF00289 Biotin carboxylase, N-terminal domain EFA59_02995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EFA59_02995 PF02785 Biotin carboxylase C-terminal domain EFA59_03000 PF01039 Carboxyl transferase domain EFA59_03005 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EFA59_03010 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EFA59_03015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EFA59_03015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EFA59_03015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EFA59_03015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EFA59_03020 PF04011 LemA family EFA59_03025 PF01435 Peptidase family M48 EFA59_03030 PF01938 TRAM domain EFA59_03030 PF05958 tRNA (Uracil-5-)-methyltransferase EFA59_03035 PF00857 Isochorismatase family EFA59_03040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EFA59_03045 PF00270 DEAD/DEAH box helicase EFA59_03045 PF00271 Helicase conserved C-terminal domain EFA59_03050 PF02629 CoA binding domain EFA59_03050 PF06971 Putative DNA-binding protein N-terminus EFA59_03055 PF00950 ABC 3 transport family EFA59_03055 PF02742 Iron dependent repressor, metal binding and dimerisation domain EFA59_03065 PF12822 ECF transporter, substrate-specific component EFA59_03070 PF00356 Bacterial regulatory proteins, lacI family EFA59_03080 PF00696 Amino acid kinase family EFA59_03080 PF13840 ACT domain EFA59_03085 PF00842 Alanine racemase, C-terminal domain EFA59_03085 PF01168 Alanine racemase, N-terminal domain EFA59_03090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EFA59_03090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EFA59_03095 PF14602 Hexapeptide repeat of succinyl-transferase EFA59_03095 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EFA59_03095 PF00132 Bacterial transferase hexapeptide (six repeats) EFA59_03100 PF01546 Peptidase family M20/M25/M40 EFA59_03100 PF07687 Peptidase dimerisation domain EFA59_03105 PF00701 Dihydrodipicolinate synthetase family EFA59_03110 PF01113 Dihydrodipicolinate reductase, N-terminus EFA59_03110 PF05173 Dihydrodipicolinate reductase, C-terminus EFA59_03115 PF00155 Aminotransferase class I and II EFA59_03120 PF02774 Semialdehyde dehydrogenase, dimerisation domain EFA59_03120 PF01118 Semialdehyde dehydrogenase, NAD binding domain EFA59_03130 PF00155 Aminotransferase class I and II EFA59_03135 PF12822 ECF transporter, substrate-specific component EFA59_03150 PF08501 Shikimate dehydrogenase substrate binding domain EFA59_03150 PF01488 Shikimate / quinate 5-dehydrogenase EFA59_03150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EFA59_03155 PF18152 DAHP synthase ferredoxin-like domain EFA59_03155 PF00793 DAHP synthetase I family EFA59_03160 PF01761 3-dehydroquinate synthase EFA59_03165 PF01264 Chorismate synthase EFA59_03170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EFA59_03175 PF01202 Shikimate kinase EFA59_03180 PF01487 Type I 3-dehydroquinase EFA59_03195 PF00005 ABC transporter EFA59_03200 PF09819 ABC-type cobalt transport system, permease component EFA59_03205 PF14572 Phosphoribosyl synthetase-associated domain EFA59_03205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EFA59_03210 PF00248 Aldo/keto reductase family EFA59_03215 PF07308 Protein of unknown function (DUF1456) EFA59_03220 PF01566 Natural resistance-associated macrophage protein EFA59_03240 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal EFA59_03240 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EFA59_03240 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EFA59_03250 PF02686 Glu-tRNAGln amidotransferase C subunit EFA59_03255 PF01425 Amidase EFA59_03260 PF02637 GatB domain EFA59_03260 PF02934 GatB/GatE catalytic domain EFA59_03265 PF00781 Diacylglycerol kinase catalytic domain EFA59_03280 PF01270 Glycosyl hydrolases family 8 EFA59_03285 PF02350 UDP-N-acetylglucosamine 2-epimerase EFA59_03290 PF07564 Domain of Unknown Function (DUF1542) EFA59_03290 PF01468 GA module EFA59_03305 PF12833 Helix-turn-helix domain EFA59_03310 PF02875 Mur ligase family, glutamate ligase domain EFA59_03310 PF08245 Mur ligase middle domain EFA59_03315 PF01725 Ham1 family EFA59_03320 PF08245 Mur ligase middle domain EFA59_03320 PF02875 Mur ligase family, glutamate ligase domain EFA59_03330 PF05746 DALR anticodon binding domain EFA59_03330 PF00750 tRNA synthetases class I (R) EFA59_03330 PF03485 Arginyl tRNA synthetase N terminal domain EFA59_03335 PF01316 Arginine repressor, DNA binding domain EFA59_03335 PF02863 Arginine repressor, C-terminal domain EFA59_03340 PF00905 Penicillin binding protein transpeptidase domain EFA59_03340 PF00912 Transglycosylase EFA59_03345 PF06133 Control of competence regulator ComK, YlbF/YmcA EFA59_03350 PF00149 Calcineurin-like phosphoesterase EFA59_03355 PF13514 AAA domain EFA59_03360 PF01336 OB-fold nucleic acid binding domain EFA59_03360 PF01966 HD domain EFA59_03365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_03365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_03370 PF03703 Bacterial PH domain EFA59_03390 PF02447 GntP family permease EFA59_03400 PF00675 Insulinase (Peptidase family M16) EFA59_03400 PF05193 Peptidase M16 inactive domain EFA59_03405 PF13464 Domain of unknown function (DUF4115) EFA59_03410 PF01066 CDP-alcohol phosphatidyltransferase EFA59_03415 PF00994 Probable molybdopterin binding domain EFA59_03415 PF18146 Damage-inducible protein CinA KH domain EFA59_03415 PF02464 Competence-damaged protein EFA59_03420 PF00154 recA bacterial DNA recombination protein EFA59_03425 PF13538 UvrD-like helicase C-terminal domain EFA59_03430 PF00485 Phosphoribulokinase / Uridine kinase family EFA59_03440 PF07690 Major Facilitator Superfamily EFA59_03450 PF00313 'Cold-shock' DNA-binding domain EFA59_03455 PF00849 RNA pseudouridylate synthase EFA59_03455 PF01479 S4 domain EFA59_03465 PF02073 Thermophilic metalloprotease (M29) EFA59_03475 PF01625 Peptide methionine sulfoxide reductase EFA59_03480 PF01641 SelR domain EFA59_03490 PF01906 Putative heavy-metal-binding EFA59_03495 PF04991 LicD family EFA59_03505 PF00005 ABC transporter EFA59_03505 PF01476 LysM domain EFA59_03510 PF01061 ABC-2 type transporter EFA59_03525 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EFA59_03525 PF00535 Glycosyl transferase family 2 EFA59_03530 PF01467 Cytidylyltransferase-like EFA59_03560 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EFA59_03580 PF01380 SIS domain EFA59_03610 PF01055 Glycosyl hydrolases family 31 EFA59_03610 PF17137 Domain of unknown function (DUF5110) EFA59_03610 PF16338 Domain of unknown function (DUF4968) EFA59_03625 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EFA59_03635 PF00557 Metallopeptidase family M24 EFA59_03640 PF02397 Bacterial sugar transferase EFA59_03660 PF03275 UDP-galactopyranose mutase EFA59_03675 PF00535 Glycosyl transferase family 2 EFA59_03680 PF00535 Glycosyl transferase family 2 EFA59_03705 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EFA59_03705 PF01628 HrcA protein C terminal domain EFA59_03710 PF01025 GrpE EFA59_03715 PF00012 Hsp70 protein EFA59_03720 PF00684 DnaJ central domain EFA59_03720 PF01556 DnaJ C terminal domain EFA59_03720 PF00226 DnaJ domain EFA59_03735 PF12706 Beta-lactamase superfamily domain EFA59_03735 PF00753 Metallo-beta-lactamase superfamily EFA59_03740 PF01368 DHH family EFA59_03740 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EFA59_03740 PF17768 RecJ OB domain EFA59_03740 PF02272 DHHA1 domain EFA59_03745 PF00156 Phosphoribosyl transferase domain EFA59_03765 PF00884 Sulfatase EFA59_03790 PF12464 Maltose acetyltransferase EFA59_03790 PF14602 Hexapeptide repeat of succinyl-transferase EFA59_03795 PF00717 Peptidase S24-like EFA59_03795 PF01726 LexA DNA binding domain EFA59_03800 PF05979 Bacterial protein of unknown function (DUF896) EFA59_03805 PF03672 Uncharacterised protein family (UPF0154) EFA59_03810 PF01553 Acyltransferase EFA59_03815 PF05175 Methyltransferase small domain EFA59_03820 PF01541 GIY-YIG catalytic domain EFA59_03825 PF00318 Ribosomal protein S2 EFA59_03830 PF00889 Elongation factor TS EFA59_03835 PF00696 Amino acid kinase family EFA59_03840 PF01765 Ribosome recycling factor EFA59_03845 PF03816 Cell envelope-related transcriptional attenuator domain EFA59_03850 PF00909 Ammonium Transporter Family EFA59_03855 PF01380 SIS domain EFA59_03865 PF01743 Poly A polymerase head domain EFA59_03865 PF13735 tRNA nucleotidyltransferase domain 2 putative EFA59_03865 PF12627 Probable RNA and SrmB- binding site of polymerase A EFA59_03870 PF00005 ABC transporter EFA59_03870 PF16326 ABC transporter C-terminal domain EFA59_03870 PF12848 ABC transporter EFA59_03875 PF00186 Dihydrofolate reductase EFA59_03885 PF02811 PHP domain EFA59_03885 PF07733 Bacterial DNA polymerase III alpha NTPase domain EFA59_03885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EFA59_03885 PF14579 Helix-hairpin-helix motif EFA59_03885 PF01336 OB-fold nucleic acid binding domain EFA59_03890 PF04607 Region found in RelA / SpoT proteins EFA59_03890 PF13291 ACT domain EFA59_03890 PF02824 TGS domain EFA59_03895 PF02580 D-Tyr-tRNA(Tyr) deacylase EFA59_03905 PF00999 Sodium/hydrogen exchanger family EFA59_03915 PF13509 S1 domain EFA59_03915 PF17783 CvfB-like winged helix domain EFA59_03920 PF00589 Phage integrase family EFA59_03920 PF02899 Phage integrase, N-terminal SAM-like domain EFA59_03925 PF00583 Acetyltransferase (GNAT) family EFA59_03930 PF02616 Segregation and condensation protein ScpA EFA59_03935 PF04079 Segregation and condensation complex subunit ScpB EFA59_03940 PF00849 RNA pseudouridylate synthase EFA59_03940 PF01479 S4 domain EFA59_03945 PF12822 ECF transporter, substrate-specific component EFA59_03955 PF00270 DEAD/DEAH box helicase EFA59_03955 PF00271 Helicase conserved C-terminal domain EFA59_03965 PF02224 Cytidylate kinase EFA59_03970 PF00575 S1 RNA binding domain EFA59_03975 PF01926 50S ribosome-binding GTPase EFA59_03975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EFA59_03980 PF00216 Bacterial DNA-binding protein EFA59_03985 PF08543 Phosphomethylpyrimidine kinase EFA59_03990 PF07155 ECF-type riboflavin transporter, S component EFA59_03995 PF07690 Major Facilitator Superfamily EFA59_04000 PF12320 Type 5 capsule protein repressor C-terminal domain EFA59_04000 PF00149 Calcineurin-like phosphoesterase EFA59_04005 PF13476 AAA domain EFA59_04010 PF00293 NUDIX domain EFA59_04010 PF13344 Haloacid dehalogenase-like hydrolase EFA59_04025 PF04816 tRNA (adenine(22)-N(1))-methyltransferase EFA59_04030 PF01784 NIF3 (NGG1p interacting factor 3) EFA59_04035 PF07687 Peptidase dimerisation domain EFA59_04035 PF01546 Peptidase family M20/M25/M40 EFA59_04040 PF00682 HMGL-like EFA59_04040 PF02436 Conserved carboxylase domain EFA59_04040 PF00289 Biotin carboxylase, N-terminal domain EFA59_04040 PF02785 Biotin carboxylase C-terminal domain EFA59_04040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EFA59_04040 PF00364 Biotin-requiring enzyme EFA59_04050 PF00471 Ribosomal protein L33 EFA59_04055 PF00253 Ribosomal protein S14p/S29e EFA59_04075 PF00746 LPXTG cell wall anchor motif EFA59_04090 PF12833 Helix-turn-helix domain EFA59_04095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_04100 PF08544 GHMP kinases C terminal EFA59_04100 PF00288 GHMP kinases N terminal domain EFA59_04100 PF10509 Galactokinase galactose-binding signature EFA59_04105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EFA59_04105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EFA59_04110 PF00440 Bacterial regulatory proteins, tetR family EFA59_04115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_04115 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_04120 PF06177 QueT transporter EFA59_04125 PF00679 Elongation factor G C-terminus EFA59_04125 PF00009 Elongation factor Tu GTP binding domain EFA59_04125 PF06421 GTP-binding protein LepA C-terminus EFA59_04135 PF16875 Glycosyl hydrolase family 36 N-terminal domain EFA59_04135 PF16874 Glycosyl hydrolase family 36 C-terminal domain EFA59_04155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EFA59_04155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EFA59_04160 PF09330 D-lactate dehydrogenase, membrane binding EFA59_04160 PF01565 FAD binding domain EFA59_04170 PF01757 Acyltransferase family EFA59_04195 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_04200 PF03180 NLPA lipoprotein EFA59_04205 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_04210 PF00011 Hsp20/alpha crystallin family EFA59_04235 PF03883 Peroxide stress protein YaaA EFA59_04240 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_04245 PF00465 Iron-containing alcohol dehydrogenase EFA59_04325 PF13166 AAA domain EFA59_04330 PF11799 impB/mucB/samB family C-terminal domain EFA59_04330 PF00817 impB/mucB/samB family EFA59_04330 PF11798 IMS family HHH motif EFA59_04350 PF00664 ABC transporter transmembrane region EFA59_04350 PF03412 Peptidase C39 family EFA59_04350 PF00005 ABC transporter EFA59_04355 PF00239 Resolvase, N terminal domain EFA59_04355 PF02796 Helix-turn-helix domain of resolvase EFA59_04370 PF00440 Bacterial regulatory proteins, tetR family EFA59_04375 PF03176 MMPL family EFA59_04400 PF07728 AAA domain (dynein-related subfamily) EFA59_04400 PF12102 Domain of unknown function (DUF3578) EFA59_04415 PF00356 Bacterial regulatory proteins, lacI family EFA59_04425 PF16657 Maltogenic Amylase, C-terminal domain EFA59_04425 PF00128 Alpha amylase, catalytic domain EFA59_04435 PF07690 Major Facilitator Superfamily EFA59_04445 PF03070 TENA/THI-4/PQQC family EFA59_04450 PF08543 Phosphomethylpyrimidine kinase EFA59_04455 PF01546 Peptidase family M20/M25/M40 EFA59_04465 PF03747 ADP-ribosylglycohydrolase EFA59_04470 PF10702 Protein of unknown function (DUF2507) EFA59_04475 PF02390 Putative methyltransferase EFA59_04485 PF00005 ABC transporter EFA59_04490 PF01230 HIT domain EFA59_04500 PF17757 UvrB interaction domain EFA59_04500 PF12344 Ultra-violet resistance protein B EFA59_04500 PF02151 UvrB/uvrC motif EFA59_04500 PF04851 Type III restriction enzyme, res subunit EFA59_04500 PF00271 Helicase conserved C-terminal domain EFA59_04515 PF12826 Helix-hairpin-helix motif EFA59_04515 PF03120 NAD-dependent DNA ligase OB-fold domain EFA59_04515 PF01653 NAD-dependent DNA ligase adenylation domain EFA59_04515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EFA59_04515 PF00533 BRCA1 C Terminus (BRCT) domain EFA59_04520 PF00580 UvrD/REP helicase N-terminal domain EFA59_04520 PF13361 UvrD-like helicase C-terminal domain EFA59_04525 PF02926 THUMP domain EFA59_04525 PF01170 Putative RNA methylase family UPF0020 EFA59_04535 PF05103 DivIVA protein EFA59_04540 PF06908 YspA SLOG family EFA59_04545 PF03838 Recombination protein U EFA59_04550 PF00905 Penicillin binding protein transpeptidase domain EFA59_04550 PF00912 Transglycosylase EFA59_04555 PF07261 Replication initiation and membrane attachment EFA59_04560 PF00152 tRNA synthetases class II (D, K and N) EFA59_04560 PF01336 OB-fold nucleic acid binding domain EFA59_04570 PF00929 Exonuclease EFA59_04570 PF13307 Helicase C-terminal domain EFA59_04570 PF04851 Type III restriction enzyme, res subunit EFA59_04575 PF00288 GHMP kinases N terminal domain EFA59_04575 PF10509 Galactokinase galactose-binding signature EFA59_04575 PF08544 GHMP kinases C terminal EFA59_04590 PF01070 FMN-dependent dehydrogenase EFA59_04595 PF00440 Bacterial regulatory proteins, tetR family EFA59_04600 PF02096 60Kd inner membrane protein EFA59_04610 PF00512 His Kinase A (phospho-acceptor) domain EFA59_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_04610 PF18719 ArlS sensor domain EFA59_04615 PF00486 Transcriptional regulatory protein, C terminal EFA59_04615 PF00072 Response regulator receiver domain EFA59_04630 PF07319 Primosomal protein DnaI N-terminus EFA59_04630 PF01695 IstB-like ATP binding protein EFA59_04640 PF01121 Dephospho-CoA kinase EFA59_04645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EFA59_04645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EFA59_04645 PF06827 Zinc finger found in FPG and IleRS EFA59_04695 PF06993 Protein of unknown function (DUF1304) EFA59_04700 PF00107 Zinc-binding dehydrogenase EFA59_04700 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_04710 PF00893 Small Multidrug Resistance protein EFA59_04725 PF00893 Small Multidrug Resistance protein EFA59_04740 PF02929 Beta galactosidase small chain EFA59_04745 PF00703 Glycosyl hydrolases family 2 EFA59_04745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EFA59_04745 PF02837 Glycosyl hydrolases family 2, sugar binding domain EFA59_04755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EFA59_04755 PF01367 5'-3' exonuclease, C-terminal SAM fold EFA59_04755 PF00476 DNA polymerase family A EFA59_04760 PF00248 Aldo/keto reductase family EFA59_04765 PF01027 Inhibitor of apoptosis-promoting Bax1 EFA59_04770 PF01225 Mur ligase family, catalytic domain EFA59_04770 PF08245 Mur ligase middle domain EFA59_04770 PF02875 Mur ligase family, glutamate ligase domain EFA59_04780 PF14794 Domain of unknown function (DUF4479) EFA59_04780 PF01588 Putative tRNA binding domain EFA59_04785 PF05343 M42 glutamyl aminopeptidase EFA59_04790 PF00485 Phosphoribulokinase / Uridine kinase family EFA59_04795 PF00989 PAS fold EFA59_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_04795 PF00512 His Kinase A (phospho-acceptor) domain EFA59_04795 PF16736 Single Cache-like EFA59_04800 PF00486 Transcriptional regulatory protein, C terminal EFA59_04800 PF00072 Response regulator receiver domain EFA59_04805 PF07690 Major Facilitator Superfamily EFA59_04810 PF00140 Sigma-70 factor, region 1.2 EFA59_04810 PF04542 Sigma-70 region 2 EFA59_04810 PF03979 Sigma-70 factor, region 1.1 EFA59_04810 PF04539 Sigma-70 region 3 EFA59_04810 PF04545 Sigma-70, region 4 EFA59_04815 PF10410 DnaB-helicase binding domain of primase EFA59_04815 PF01807 CHC2 zinc finger EFA59_04815 PF08275 DNA primase catalytic core, N-terminal domain EFA59_04840 PF16197 Ketoacyl-synthetase C-terminal extension EFA59_04840 PF13193 AMP-binding enzyme C-terminal domain EFA59_04840 PF14765 Polyketide synthase dehydratase EFA59_04840 PF08659 KR domain EFA59_04840 PF00109 Beta-ketoacyl synthase, N-terminal domain EFA59_04840 PF02801 Beta-ketoacyl synthase, C-terminal domain EFA59_04840 PF00550 Phosphopantetheine attachment site EFA59_04840 PF00501 AMP-binding enzyme EFA59_04840 PF00668 Condensation domain EFA59_04850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EFA59_04855 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_04855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_04860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_04865 PF00005 ABC transporter EFA59_04870 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_04885 PF03965 Penicillinase repressor EFA59_04925 PF01751 Toprim domain EFA59_04925 PF01131 DNA topoisomerase EFA59_04935 PF00005 ABC transporter EFA59_04940 PF13443 Cro/C1-type HTH DNA-binding domain EFA59_04975 PF02016 LD-carboxypeptidase N-terminal domain EFA59_04975 PF17676 LD-carboxypeptidase C-terminal domain EFA59_05015 PF01070 FMN-dependent dehydrogenase EFA59_05020 PF03641 Possible lysine decarboxylase EFA59_05035 PF13419 Haloacid dehalogenase-like hydrolase EFA59_05040 PF03632 Glycosyl hydrolase family 65 central catalytic domain EFA59_05040 PF03633 Glycosyl hydrolase family 65, C-terminal domain EFA59_05040 PF03636 Glycosyl hydrolase family 65, N-terminal domain EFA59_05045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_05045 PF00367 phosphotransferase system, EIIB EFA59_05045 PF02378 Phosphotransferase system, EIIC EFA59_05050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_05055 PF00392 Bacterial regulatory proteins, gntR family EFA59_05055 PF07702 UTRA domain EFA59_05060 PF00356 Bacterial regulatory proteins, lacI family EFA59_05065 PF08244 Glycosyl hydrolases family 32 C terminal EFA59_05065 PF00251 Glycosyl hydrolases family 32 N-terminal domain EFA59_05070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_05070 PF02378 Phosphotransferase system, EIIC EFA59_05070 PF00367 phosphotransferase system, EIIB EFA59_05075 PF00107 Zinc-binding dehydrogenase EFA59_05075 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_05080 PF00557 Metallopeptidase family M24 EFA59_05090 PF00990 Diguanylate cyclase, GGDEF domain EFA59_05115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EFA59_05125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_05130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EFA59_05130 PF00364 Biotin-requiring enzyme EFA59_05130 PF02817 e3 binding domain EFA59_05135 PF02779 Transketolase, pyrimidine binding domain EFA59_05135 PF02780 Transketolase, C-terminal domain EFA59_05140 PF00676 Dehydrogenase E1 component EFA59_05145 PF10437 Bacterial lipoate protein ligase C-terminus EFA59_05145 PF03099 Biotin/lipoate A/B protein ligase family EFA59_05150 PF13180 PDZ domain EFA59_05150 PF05362 Lon protease (S16) C-terminal proteolytic domain EFA59_05155 PF01467 Cytidylyltransferase-like EFA59_05165 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) EFA59_05170 PF01098 Cell cycle protein EFA59_05180 PF00459 Inositol monophosphatase family EFA59_05185 PF05256 Uncharacterised protein family (UPF0223) EFA59_05190 PF01327 Polypeptide deformylase EFA59_05205 PF17770 Ribonuclease J C-terminal domain EFA59_05205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EFA59_05205 PF00753 Metallo-beta-lactamase superfamily EFA59_05210 PF00781 Diacylglycerol kinase catalytic domain EFA59_05215 PF01625 Peptide methionine sulfoxide reductase EFA59_05220 PF03180 NLPA lipoprotein EFA59_05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_05235 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_05240 PF00005 ABC transporter EFA59_05240 PF00571 CBS domain EFA59_05245 PF00392 Bacterial regulatory proteins, gntR family EFA59_05245 PF07729 FCD domain EFA59_05250 PF02833 DHHA2 domain EFA59_05250 PF01368 DHH family EFA59_05255 PF00521 DNA gyrase/topoisomerase IV, subunit A EFA59_05255 PF03989 DNA gyrase C-terminal domain, beta-propeller EFA59_05260 PF00204 DNA gyrase B EFA59_05260 PF00986 DNA gyrase B subunit, carboxyl terminus EFA59_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_05260 PF01751 Toprim domain EFA59_05265 PF02660 Glycerol-3-phosphate acyltransferase EFA59_05275 PF00589 Phage integrase family EFA59_05275 PF02899 Phage integrase, N-terminal SAM-like domain EFA59_05280 PF01751 Toprim domain EFA59_05280 PF01131 DNA topoisomerase EFA59_05280 PF01396 Topoisomerase DNA binding C4 zinc finger EFA59_05285 PF02481 DNA recombination-mediator protein A EFA59_05290 PF01351 Ribonuclease HII EFA59_05295 PF01926 50S ribosome-binding GTPase EFA59_05300 PF06855 YozE SAM-like fold EFA59_05310 PF13472 GDSL-like Lipase/Acylhydrolase family EFA59_05315 PF02645 Uncharacterised protein, DegV family COG1307 EFA59_05320 PF02645 Uncharacterised protein, DegV family COG1307 EFA59_05330 PF03932 CutC family EFA59_05340 PF01687 Riboflavin kinase EFA59_05340 PF06574 FAD synthetase EFA59_05345 PF16198 tRNA pseudouridylate synthase B C-terminal domain EFA59_05345 PF01509 TruB family pseudouridylate synthase (N terminal domain) EFA59_05350 PF02033 Ribosome-binding factor A EFA59_05355 PF04760 Translation initiation factor IF-2, N-terminal region EFA59_05355 PF00009 Elongation factor Tu GTP binding domain EFA59_05355 PF11987 Translation-initiation factor 2 EFA59_05360 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EFA59_05365 PF04296 Protein of unknown function (DUF448) EFA59_05370 PF00575 S1 RNA binding domain EFA59_05370 PF13184 NusA-like KH domain EFA59_05370 PF08529 NusA N-terminal domain EFA59_05375 PF17384 RimP C-terminal SH3 domain EFA59_05375 PF02576 RimP N-terminal domain EFA59_05380 PF03448 MgtE intracellular N domain EFA59_05380 PF01769 Divalent cation transporter EFA59_05380 PF00571 CBS domain EFA59_05385 PF00849 RNA pseudouridylate synthase EFA59_05390 PF01513 ATP-NAD kinase EFA59_05395 PF04607 Region found in RelA / SpoT proteins EFA59_05410 PF01725 Ham1 family EFA59_05415 PF01177 Asp/Glu/Hydantoin racemase EFA59_05420 PF13419 Haloacid dehalogenase-like hydrolase EFA59_05470 PF00085 Thioredoxin EFA59_05475 PF01713 Smr domain EFA59_05475 PF00488 MutS domain V EFA59_05480 PF02674 Colicin V production protein EFA59_05490 PF01926 50S ribosome-binding GTPase EFA59_05495 PF07724 AAA domain (Cdc48 subfamily) EFA59_05495 PF10431 C-terminal, D2-small domain, of ClpB protein EFA59_05495 PF06689 ClpX C4-type zinc finger EFA59_05500 PF05697 Bacterial trigger factor protein (TF) EFA59_05500 PF05698 Bacterial trigger factor protein (TF) C-terminus EFA59_05500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EFA59_05505 PF03144 Elongation factor Tu domain 2 EFA59_05505 PF00009 Elongation factor Tu GTP binding domain EFA59_05505 PF03143 Elongation factor Tu C-terminal domain EFA59_05515 PF00753 Metallo-beta-lactamase superfamily EFA59_05515 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EFA59_05515 PF17770 Ribonuclease J C-terminal domain EFA59_05520 PF01649 Ribosomal protein S20 EFA59_05525 PF00312 Ribosomal protein S15 EFA59_05530 PF06144 DNA polymerase III, delta subunit EFA59_05535 PF13567 Domain of unknown function (DUF4131) EFA59_05535 PF03772 Competence protein EFA59_05535 PF00753 Metallo-beta-lactamase superfamily EFA59_05545 PF10531 SLBB domain EFA59_05550 PF06949 Protein of unknown function (DUF1292) EFA59_05555 PF06949 Protein of unknown function (DUF1292) EFA59_05560 PF03652 Holliday junction resolvase EFA59_05565 PF06135 IreB regulatory phosphoprotein EFA59_05570 PF02272 DHHA1 domain EFA59_05570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EFA59_05570 PF01411 tRNA synthetases class II (A) EFA59_05575 PF00271 Helicase conserved C-terminal domain EFA59_05575 PF00270 DEAD/DEAH box helicase EFA59_05580 PF01368 DHH family EFA59_05580 PF02272 DHHA1 domain EFA59_05585 PF00817 impB/mucB/samB family EFA59_05585 PF11799 impB/mucB/samB family C-terminal domain EFA59_05590 PF02699 Preprotein translocase subunit EFA59_05595 PF01702 Queuine tRNA-ribosyltransferase EFA59_05630 PF02547 Queuosine biosynthesis protein EFA59_05635 PF17864 RuvB AAA lid domain EFA59_05635 PF05491 RuvB C-terminal winged helix domain EFA59_05635 PF05496 Holliday junction DNA helicase RuvB P-loop domain EFA59_05640 PF07499 RuvA, C-terminal domain EFA59_05640 PF01330 RuvA N terminal domain EFA59_05645 PF07690 Major Facilitator Superfamily EFA59_05655 PF01205 Uncharacterized protein family UPF0029 EFA59_05655 PF09186 Domain of unknown function (DUF1949) EFA59_05660 PF09269 Domain of unknown function (DUF1967) EFA59_05660 PF01926 50S ribosome-binding GTPase EFA59_05660 PF01018 GTP1/OBG EFA59_05665 PF02151 UvrB/uvrC motif EFA59_05665 PF01541 GIY-YIG catalytic domain EFA59_05665 PF08459 UvrC Helix-hairpin-helix N-terminal EFA59_05675 PF00005 ABC transporter EFA59_05675 PF13732 Domain of unknown function (DUF4162) EFA59_05680 PF17854 FtsK alpha domain EFA59_05680 PF09397 Ftsk gamma domain EFA59_05680 PF01580 FtsK/SpoIIIE family EFA59_05685 PF00588 SpoU rRNA Methylase family EFA59_05690 PF01594 AI-2E family transporter EFA59_05695 PF10282 Lactonase, 7-bladed beta-propeller EFA59_05700 PF02092 Glycyl-tRNA synthetase beta subunit EFA59_05705 PF02091 Glycyl-tRNA synthetase alpha subunit EFA59_05710 PF11967 Recombination protein O N terminal EFA59_05710 PF02565 Recombination protein O C terminal EFA59_05715 PF01926 50S ribosome-binding GTPase EFA59_05715 PF07650 KH domain EFA59_05720 PF01219 Prokaryotic diacylglycerol kinase EFA59_05725 PF02130 Uncharacterized protein family UPF0054 EFA59_05730 PF02562 PhoH-like protein EFA59_05735 PF09424 Yqey-like protein EFA59_05740 PF01165 Ribosomal protein S21 EFA59_05745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EFA59_05745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EFA59_05750 PF02938 GAD domain EFA59_05750 PF00152 tRNA synthetases class II (D, K and N) EFA59_05750 PF01336 OB-fold nucleic acid binding domain EFA59_05755 PF13393 Histidyl-tRNA synthetase EFA59_05755 PF03129 Anticodon binding domain EFA59_05760 PF01520 N-acetylmuramoyl-L-alanine amidase EFA59_05760 PF08239 Bacterial SH3 domain EFA59_05770 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal EFA59_05770 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal EFA59_05775 PF04127 DNA / pantothenate metabolism flavoprotein EFA59_05775 PF02441 Flavoprotein EFA59_05830 PF13333 Integrase core domain EFA59_05830 PF00665 Integrase core domain EFA59_05835 PF10544 T5orf172 domain EFA59_05870 PF13276 HTH-like domain EFA59_05870 PF13333 Integrase core domain EFA59_05870 PF00665 Integrase core domain EFA59_05965 PF00589 Phage integrase family EFA59_05965 PF14659 Phage integrase, N-terminal SAM-like domain EFA59_05980 PF01022 Bacterial regulatory protein, arsR family EFA59_06000 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_06000 PF13823 Alcohol dehydrogenase GroES-associated EFA59_06000 PF00107 Zinc-binding dehydrogenase EFA59_06005 PF13411 MerR HTH family regulatory protein EFA59_06010 PF00248 Aldo/keto reductase family EFA59_06040 PF00440 Bacterial regulatory proteins, tetR family EFA59_06045 PF00202 Aminotransferase class-III EFA59_06050 PF13520 Amino acid permease EFA59_06055 PF00356 Bacterial regulatory proteins, lacI family EFA59_06060 PF00557 Metallopeptidase family M24 EFA59_06060 PF01321 Creatinase/Prolidase N-terminal domain EFA59_06075 PF01432 Peptidase family M3 EFA59_06075 PF08439 Oligopeptidase F EFA59_06085 PF05389 Negative regulator of genetic competence (MecA) EFA59_06090 PF03960 ArsC family EFA59_06100 PF06146 Phosphate-starvation-inducible E EFA59_06125 PF01741 Large-conductance mechanosensitive channel, MscL EFA59_06130 PF01712 Deoxynucleoside kinase EFA59_06140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_06140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_06145 PF01361 Tautomerase enzyme EFA59_06150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EFA59_06150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EFA59_06155 PF00375 Sodium:dicarboxylate symporter family EFA59_06160 PF01245 Ribosomal protein L19 EFA59_06165 PF01746 tRNA (Guanine-1)-methyltransferase EFA59_06170 PF05239 PRC-barrel domain EFA59_06170 PF01782 RimM N-terminal domain EFA59_06175 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_06180 PF00886 Ribosomal protein S16 EFA59_06185 PF00448 SRP54-type protein, GTPase domain EFA59_06185 PF02881 SRP54-type protein, helical bundle domain EFA59_06185 PF02978 Signal peptide binding domain EFA59_06190 PF04297 Putative helix-turn-helix protein, YlxM / p13 like EFA59_06195 PF00448 SRP54-type protein, GTPase domain EFA59_06195 PF02881 SRP54-type protein, helical bundle domain EFA59_06200 PF06470 SMC proteins Flexible Hinge Domain EFA59_06200 PF02463 RecF/RecN/SMC N terminal domain EFA59_06205 PF14622 Ribonuclease-III-like EFA59_06205 PF00035 Double-stranded RNA binding motif EFA59_06210 PF00550 Phosphopantetheine attachment site EFA59_06215 PF02504 Fatty acid synthesis protein EFA59_06220 PF17191 RecG wedge domain EFA59_06220 PF00270 DEAD/DEAH box helicase EFA59_06220 PF00271 Helicase conserved C-terminal domain EFA59_06225 PF13684 Dihydroxyacetone kinase family EFA59_06225 PF02734 DAK2 domain EFA59_06230 PF03780 Asp23 family, cell envelope-related function EFA59_06235 PF00830 Ribosomal L28 family EFA59_06245 PF00834 Ribulose-phosphate 3 epimerase family EFA59_06250 PF03193 RsgA GTPase EFA59_06250 PF16745 RsgA N-terminal domain EFA59_06255 PF03793 PASTA domain EFA59_06255 PF00069 Protein kinase domain EFA59_06265 PF01029 NusB family EFA59_06265 PF01189 16S rRNA methyltransferase RsmB/F EFA59_06270 PF00551 Formyl transferase EFA59_06270 PF02911 Formyl transferase, C-terminal domain EFA59_06275 PF00271 Helicase conserved C-terminal domain EFA59_06275 PF17764 3′ DNA-binding domain (3′BD) EFA59_06275 PF18074 Primosomal protein N C-terminal domain EFA59_06275 PF04851 Type III restriction enzyme, res subunit EFA59_06275 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EFA59_06280 PF00871 Acetokinase family EFA59_06305 PF07963 Prokaryotic N-terminal methylation motif EFA59_06305 PF08334 Type II secretion system (T2SS), protein G EFA59_06310 PF00482 Type II secretion system (T2SS), protein F EFA59_06315 PF00437 Type II/IV secretion system protein EFA59_06320 PF00860 Permease family EFA59_06325 PF01709 Transcriptional regulator EFA59_06330 PF13538 UvrD-like helicase C-terminal domain EFA59_06330 PF14490 Helix-hairpin-helix containing domain EFA59_06330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EFA59_06340 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_06345 PF08264 Anticodon-binding domain of tRNA EFA59_06345 PF00133 tRNA synthetases class I (I, L, M and V) EFA59_06345 PF06827 Zinc finger found in FPG and IleRS EFA59_06350 PF05103 DivIVA protein EFA59_06365 PF04472 Cell division protein SepF EFA59_06370 PF00091 Tubulin/FtsZ family, GTPase domain EFA59_06370 PF12327 FtsZ family, C-terminal domain EFA59_06375 PF02491 SHS2 domain inserted in FTSA EFA59_06375 PF11983 Membrane-attachment and polymerisation-promoting switch EFA59_06380 PF03799 Cell division protein FtsQ EFA59_06380 PF08478 POTRA domain, FtsQ-type EFA59_06385 PF03033 Glycosyltransferase family 28 N-terminal domain EFA59_06385 PF04101 Glycosyltransferase family 28 C-terminal domain EFA59_06390 PF02875 Mur ligase family, glutamate ligase domain EFA59_06390 PF08245 Mur ligase middle domain EFA59_06395 PF00953 Glycosyl transferase family 4 EFA59_06395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EFA59_06410 PF01795 MraW methylase family EFA59_06415 PF02381 MraZ protein, putative antitoxin-like EFA59_06425 PF04452 RNA methyltransferase EFA59_06435 PF00224 Pyruvate kinase, barrel domain EFA59_06435 PF02887 Pyruvate kinase, alpha/beta domain EFA59_06435 PF00391 PEP-utilising enzyme, mobile domain EFA59_06440 PF00324 Amino acid permease EFA59_06450 PF01268 Formate--tetrahydrofolate ligase EFA59_06460 PF00005 ABC transporter EFA59_06465 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_06490 PF04002 RadC-like JAB domain EFA59_06505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EFA59_06510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EFA59_06515 PF00005 ABC transporter EFA59_06520 PF02653 Branched-chain amino acid transport system / permease component EFA59_06530 PF00268 Ribonucleotide reductase, small chain EFA59_06535 PF02867 Ribonucleotide reductase, barrel domain EFA59_06535 PF00317 Ribonucleotide reductase, all-alpha domain EFA59_06535 PF08343 Ribonucleotide reductase N-terminal EFA59_06540 PF00462 Glutaredoxin EFA59_06545 PF07972 NrdI Flavodoxin like EFA59_06570 PF01048 Phosphorylase superfamily EFA59_06580 PF00293 NUDIX domain EFA59_06585 PF00313 'Cold-shock' DNA-binding domain EFA59_06605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EFA59_06605 PF10135 Rod binding protein EFA59_06610 PF00664 ABC transporter transmembrane region EFA59_06610 PF00005 ABC transporter EFA59_06615 PF00005 ABC transporter EFA59_06615 PF00664 ABC transporter transmembrane region EFA59_06620 PF02322 Cytochrome bd terminal oxidase subunit II EFA59_06740 PF16921 Tex protein YqgF-like domain EFA59_06740 PF00575 S1 RNA binding domain EFA59_06740 PF09371 Tex-like protein N-terminal domain EFA59_06740 PF17674 HHH domain EFA59_06745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EFA59_06750 PF09335 SNARE associated Golgi protein EFA59_06755 PF01192 RNA polymerase Rpb6 EFA59_06760 PF00625 Guanylate kinase EFA59_06765 PF13476 AAA domain EFA59_06770 PF01316 Arginine repressor, DNA binding domain EFA59_06770 PF02863 Arginine repressor, C-terminal domain EFA59_06775 PF01728 FtsJ-like methyltransferase EFA59_06775 PF01479 S4 domain EFA59_06780 PF00348 Polyprenyl synthetase EFA59_06785 PF02609 Exonuclease VII small subunit EFA59_06790 PF13742 OB-fold nucleic acid binding domain EFA59_06790 PF02601 Exonuclease VII, large subunit EFA59_06795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EFA59_06795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EFA59_06800 PF07155 ECF-type riboflavin transporter, S component EFA59_06810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EFA59_06815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EFA59_06815 PF03129 Anticodon binding domain EFA59_06815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EFA59_06815 PF02824 TGS domain EFA59_06820 PF00258 Flavodoxin EFA59_06825 PF01119 DNA mismatch repair protein, C-terminal domain EFA59_06825 PF08676 MutL C terminal dimerisation domain EFA59_06830 PF00488 MutS domain V EFA59_06830 PF05188 MutS domain II EFA59_06830 PF05190 MutS family domain IV EFA59_06830 PF01624 MutS domain I EFA59_06830 PF05192 MutS domain III EFA59_06840 PF05636 HIGH Nucleotidyl Transferase EFA59_06855 PF01966 HD domain EFA59_06860 PF01467 Cytidylyltransferase-like EFA59_06870 PF01926 50S ribosome-binding GTPase EFA59_06880 PF01820 D-ala D-ala ligase N-terminus EFA59_06880 PF07478 D-ala D-ala ligase C-terminus EFA59_06890 PF13520 Amino acid permease EFA59_06895 PF00118 TCP-1/cpn60 chaperonin family EFA59_06900 PF00166 Chaperonin 10 Kd subunit EFA59_06905 PF00005 ABC transporter EFA59_06905 PF16326 ABC transporter C-terminal domain EFA59_06905 PF12848 ABC transporter EFA59_06910 PF02875 Mur ligase family, glutamate ligase domain EFA59_06910 PF08245 Mur ligase middle domain EFA59_06915 PF10458 Valyl tRNA synthetase tRNA binding arm EFA59_06915 PF00133 tRNA synthetases class I (I, L, M and V) EFA59_06915 PF08264 Anticodon-binding domain of tRNA EFA59_06925 PF03006 Haemolysin-III related EFA59_06940 PF00582 Universal stress protein family EFA59_06950 PF16193 AAA C-terminal domain EFA59_06950 PF12002 MgsA AAA+ ATPase C terminal EFA59_06950 PF05496 Holliday junction DNA helicase RuvB P-loop domain EFA59_06965 PF03144 Elongation factor Tu domain 2 EFA59_06965 PF16658 Class II release factor RF3, C-terminal domain EFA59_06965 PF00009 Elongation factor Tu GTP binding domain EFA59_06970 PF04167 Protein of unknown function (DUF402) EFA59_06975 PF02631 RecX family EFA59_06980 PF01895 PhoU domain EFA59_06985 PF00005 ABC transporter EFA59_06990 PF00005 ABC transporter EFA59_06995 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_07000 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_07005 PF12849 PBP superfamily domain EFA59_07015 PF13344 Haloacid dehalogenase-like hydrolase EFA59_07020 PF06265 Protein of unknown function (DUF1027) EFA59_07025 PF02872 5'-nucleotidase, C-terminal domain EFA59_07040 PF00557 Metallopeptidase family M24 EFA59_07040 PF01321 Creatinase/Prolidase N-terminal domain EFA59_07045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EFA59_07045 PF13378 Enolase C-terminal domain-like EFA59_07050 PF12697 Alpha/beta hydrolase family EFA59_07055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EFA59_07055 PF16582 Middle domain of thiamine pyrophosphate EFA59_07055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EFA59_07060 PF00425 chorismate binding enzyme EFA59_07065 PF01016 Ribosomal L27 protein EFA59_07070 PF00829 Ribosomal prokaryotic L21 protein EFA59_07100 PF03951 Glutamine synthetase, beta-Grasp domain EFA59_07100 PF00120 Glutamine synthetase, catalytic domain EFA59_07105 PF13411 MerR HTH family regulatory protein EFA59_07115 PF03009 Glycerophosphoryl diester phosphodiesterase family EFA59_07135 PF00480 ROK family EFA59_07145 PF01694 Rhomboid family EFA59_07150 PF01812 5-formyltetrahydrofolate cyclo-ligase family EFA59_07155 PF03717 Penicillin-binding Protein dimerisation domain EFA59_07155 PF00905 Penicillin binding protein transpeptidase domain EFA59_07165 PF03449 Transcription elongation factor, N-terminal EFA59_07165 PF01272 Transcription elongation factor, GreA/GreB, C-term EFA59_07170 PF00271 Helicase conserved C-terminal domain EFA59_07170 PF00570 HRDC domain EFA59_07170 PF16124 RecQ zinc-binding EFA59_07170 PF09382 RQC domain EFA59_07170 PF00270 DEAD/DEAH box helicase EFA59_07175 PF02618 YceG-like family EFA59_07180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EFA59_07180 PF01588 Putative tRNA binding domain EFA59_07180 PF03147 Ferredoxin-fold anticodon binding domain EFA59_07180 PF03484 tRNA synthetase B5 domain EFA59_07180 PF03483 B3/4 domain EFA59_07185 PF01409 tRNA synthetases class II core domain (F) EFA59_07185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EFA59_07190 PF01638 HxlR-like helix-turn-helix EFA59_07200 PF06800 Sugar transport protein EFA59_07210 PF00588 SpoU rRNA Methylase family EFA59_07210 PF08032 RNA 2'-O ribose methyltransferase substrate binding EFA59_07215 PF02388 FemAB family EFA59_07220 PF00472 RF-1 domain EFA59_07220 PF03462 PCRF domain EFA59_07225 PF01043 SecA preprotein cross-linking domain EFA59_07225 PF07517 SecA DEAD-like domain EFA59_07225 PF07516 SecA Wing and Scaffold domain EFA59_07230 PF00749 tRNA synthetases class I (E and Q), catalytic domain EFA59_07240 PF18073 Rubredoxin metal binding domain EFA59_07245 PF00692 dUTPase EFA59_07255 PF00877 NlpC/P60 family EFA59_07280 PF00107 Zinc-binding dehydrogenase EFA59_07280 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_07285 PF03306 Alpha-acetolactate decarboxylase EFA59_07290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EFA59_07290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EFA59_07290 PF00205 Thiamine pyrophosphate enzyme, central domain EFA59_07320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EFA59_07320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EFA59_07325 PF00574 Clp protease EFA59_07330 PF10298 WhiA N-terminal LAGLIDADG-like domain EFA59_07330 PF14527 WhiA LAGLIDADG-like domain EFA59_07330 PF02650 WhiA C-terminal HTH domain EFA59_07335 PF01933 Uncharacterised protein family UPF0052 EFA59_07340 PF03668 P-loop ATPase protein family EFA59_07350 PF17760 UvrA interaction domain EFA59_07350 PF00005 ABC transporter EFA59_07350 PF17755 UvrA DNA-binding domain EFA59_07370 PF00248 Aldo/keto reductase family EFA59_07375 PF03167 Uracil DNA glycosylase superfamily EFA59_07390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_07390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_07400 PF03611 PTS system sugar-specific permease component EFA59_07415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EFA59_07415 PF00874 PRD domain EFA59_07415 PF05043 Mga helix-turn-helix domain EFA59_07415 PF08279 HTH domain EFA59_07425 PF00248 Aldo/keto reductase family EFA59_07430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EFA59_07430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EFA59_07455 PF12849 PBP superfamily domain EFA59_07460 PF05014 Nucleoside 2-deoxyribosyltransferase EFA59_07470 PF12833 Helix-turn-helix domain EFA59_07470 PF07883 Cupin domain EFA59_07480 PF00230 Major intrinsic protein EFA59_07485 PF00121 Triosephosphate isomerase EFA59_07490 PF01266 FAD dependent oxidoreductase EFA59_07490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EFA59_07495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_07495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_07500 PF07729 FCD domain EFA59_07500 PF00392 Bacterial regulatory proteins, gntR family EFA59_07505 PF02447 GntP family permease EFA59_07510 PF01081 KDPG and KHG aldolase EFA59_07520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EFA59_07520 PF13378 Enolase C-terminal domain-like EFA59_07535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EFA59_07550 PF01546 Peptidase family M20/M25/M40 EFA59_07550 PF07687 Peptidase dimerisation domain EFA59_07575 PF00380 Ribosomal protein S9/S16 EFA59_07580 PF00572 Ribosomal protein L13 EFA59_07585 PF01416 tRNA pseudouridine synthase EFA59_07590 PF02361 Cobalt transport protein EFA59_07595 PF00005 ABC transporter EFA59_07600 PF00005 ABC transporter EFA59_07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_07615 PF01297 Zinc-uptake complex component A periplasmic EFA59_07620 PF00950 ABC 3 transport family EFA59_07625 PF00005 ABC transporter EFA59_07635 PF00542 Ribosomal protein L7/L12 C-terminal domain EFA59_07635 PF16320 Ribosomal protein L7/L12 dimerisation domain EFA59_07640 PF00466 Ribosomal protein L10 EFA59_07645 PF00687 Ribosomal protein L1p/L10e family EFA59_07650 PF03946 Ribosomal protein L11, N-terminal domain EFA59_07650 PF00298 Ribosomal protein L11, RNA binding domain EFA59_07655 PF02357 Transcription termination factor nusG EFA59_07655 PF00467 KOW motif EFA59_07665 PF00471 Ribosomal protein L33 EFA59_07675 PF00588 SpoU rRNA Methylase family EFA59_07675 PF08032 RNA 2'-O ribose methyltransferase substrate binding EFA59_07680 PF00636 Ribonuclease III domain EFA59_07685 PF00156 Phosphoribosyl transferase domain EFA59_07690 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EFA59_07695 PF01180 Dihydroorotate dehydrogenase EFA59_07700 PF02142 MGS-like domain EFA59_07700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EFA59_07700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EFA59_07705 PF00117 Glutamine amidotransferase class-I EFA59_07705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EFA59_07710 PF01979 Amidohydrolase family EFA59_07715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EFA59_07715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EFA59_07720 PF00571 CBS domain EFA59_07720 PF01380 SIS domain EFA59_07725 PF00793 DAHP synthetase I family EFA59_07730 PF02664 S-Ribosylhomocysteinase (LuxS) EFA59_07735 PF01406 tRNA synthetases class I (C) catalytic domain EFA59_07735 PF09190 DALR domain EFA59_07740 PF00248 Aldo/keto reductase family EFA59_07745 PF02540 NAD synthase EFA59_07750 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EFA59_07750 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EFA59_07750 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EFA59_07760 PF03180 NLPA lipoprotein EFA59_07765 PF00005 ABC transporter EFA59_07765 PF09383 NIL domain EFA59_07770 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_07790 PF01196 Ribosomal protein L17 EFA59_07795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EFA59_07795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EFA59_07795 PF01000 RNA polymerase Rpb3/RpoA insert domain EFA59_07800 PF00411 Ribosomal protein S11 EFA59_07805 PF00416 Ribosomal protein S13/S18 EFA59_07810 PF00444 Ribosomal protein L36 EFA59_07815 PF01176 Translation initiation factor 1A / IF-1 EFA59_07820 PF05191 Adenylate kinase, active site lid EFA59_07825 PF00344 SecY translocase EFA59_07830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EFA59_07835 PF00327 Ribosomal protein L30p/L7e EFA59_07840 PF00333 Ribosomal protein S5, N-terminal domain EFA59_07840 PF03719 Ribosomal protein S5, C-terminal domain EFA59_07845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EFA59_07850 PF00347 Ribosomal protein L6 EFA59_07855 PF00410 Ribosomal protein S8 EFA59_07860 PF00281 Ribosomal protein L5 EFA59_07860 PF00673 ribosomal L5P family C-terminus EFA59_07865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EFA59_07865 PF00467 KOW motif EFA59_07870 PF00238 Ribosomal protein L14p/L23e EFA59_07875 PF00366 Ribosomal protein S17 EFA59_07880 PF00831 Ribosomal L29 protein EFA59_07885 PF00252 Ribosomal protein L16p/L10e EFA59_07890 PF00189 Ribosomal protein S3, C-terminal domain EFA59_07890 PF07650 KH domain EFA59_07895 PF00237 Ribosomal protein L22p/L17e EFA59_07900 PF00203 Ribosomal protein S19 EFA59_07905 PF00181 Ribosomal Proteins L2, RNA binding domain EFA59_07905 PF03947 Ribosomal Proteins L2, C-terminal domain EFA59_07910 PF00276 Ribosomal protein L23 EFA59_07915 PF00573 Ribosomal protein L4/L1 family EFA59_07920 PF00297 Ribosomal protein L3 EFA59_07925 PF00338 Ribosomal protein S10p/S20e EFA59_07930 PF00348 Polyprenyl synthetase EFA59_07935 PF00814 Glycoprotease family EFA59_07950 PF00814 Glycoprotease family EFA59_07955 PF16363 GDP-mannose 4,6 dehydratase EFA59_07965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EFA59_07975 PF06153 Cyclic-di-AMP receptor EFA59_07980 PF02223 Thymidylate kinase EFA59_07990 PF02132 RecR protein EFA59_07990 PF13662 Toprim domain EFA59_07995 PF02575 YbaB/EbfC DNA-binding family EFA59_08000 PF12169 DNA polymerase III subunits gamma and tau domain III EFA59_08010 PF14437 MafB19-like deaminase EFA59_08015 PF05175 Methyltransferase small domain EFA59_08025 PF00005 ABC transporter EFA59_08025 PF16326 ABC transporter C-terminal domain EFA59_08025 PF12848 ABC transporter EFA59_08035 PF01022 Bacterial regulatory protein, arsR family EFA59_08045 PF00083 Sugar (and other) transporter EFA59_08050 PF04024 PspC domain EFA59_08055 PF07687 Peptidase dimerisation domain EFA59_08055 PF01546 Peptidase family M20/M25/M40 EFA59_08070 PF01381 Helix-turn-helix EFA59_08075 PF08241 Methyltransferase domain EFA59_08080 PF00465 Iron-containing alcohol dehydrogenase EFA59_08085 PF00465 Iron-containing alcohol dehydrogenase EFA59_08090 PF04997 RNA polymerase Rpb1, domain 1 EFA59_08090 PF00623 RNA polymerase Rpb1, domain 2 EFA59_08090 PF04983 RNA polymerase Rpb1, domain 3 EFA59_08090 PF05000 RNA polymerase Rpb1, domain 4 EFA59_08090 PF04998 RNA polymerase Rpb1, domain 5 EFA59_08095 PF04561 RNA polymerase Rpb2, domain 2 EFA59_08095 PF04565 RNA polymerase Rpb2, domain 3 EFA59_08095 PF10385 RNA polymerase beta subunit external 1 domain EFA59_08095 PF04560 RNA polymerase Rpb2, domain 7 EFA59_08095 PF00562 RNA polymerase Rpb2, domain 6 EFA59_08095 PF04563 RNA polymerase beta subunit EFA59_08100 PF02861 Clp amino terminal domain, pathogenicity island component EFA59_08100 PF00004 ATPase family associated with various cellular activities (AAA) EFA59_08100 PF10431 C-terminal, D2-small domain, of ClpB protein EFA59_08100 PF07724 AAA domain (Cdc48 subfamily) EFA59_08100 PF17871 AAA lid domain EFA59_08105 PF17727 CtsR C-terminal dimerization domain EFA59_08105 PF05848 CtsR N-terminal HTH domain EFA59_08130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EFA59_08130 PF02403 Seryl-tRNA synthetase N-terminal domain EFA59_08135 PF01712 Deoxynucleoside kinase EFA59_08140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EFA59_08140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EFA59_08145 PF02874 ATP synthase alpha/beta family, beta-barrel domain EFA59_08145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EFA59_08150 PF00231 ATP synthase EFA59_08155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EFA59_08155 PF00306 ATP synthase alpha/beta chain, C terminal domain EFA59_08155 PF02874 ATP synthase alpha/beta family, beta-barrel domain EFA59_08160 PF00213 ATP synthase delta (OSCP) subunit EFA59_08165 PF00430 ATP synthase B/B' CF(0) EFA59_08170 PF00137 ATP synthase subunit C EFA59_08175 PF00119 ATP synthase A chain EFA59_08180 PF00860 Permease family EFA59_08190 PF00464 Serine hydroxymethyltransferase EFA59_08195 PF01300 Telomere recombination EFA59_08195 PF03481 Putative GTP-binding controlling metal-binding EFA59_08200 PF17827 PrmC N-terminal domain EFA59_08200 PF05175 Methyltransferase small domain EFA59_08205 PF00472 RF-1 domain EFA59_08205 PF03462 PCRF domain EFA59_08210 PF00265 Thymidine kinase EFA59_08215 PF07685 CobB/CobQ-like glutamine amidotransferase domain EFA59_08220 PF08353 Domain of unknown function (DUF1727) EFA59_08220 PF08245 Mur ligase middle domain EFA59_08240 PF01979 Amidohydrolase family EFA59_08240 PF13382 Adenine deaminase C-terminal domain EFA59_08245 PF00860 Permease family EFA59_08250 PF00962 Adenosine/AMP deaminase EFA59_08260 PF00005 ABC transporter EFA59_08260 PF00664 ABC transporter transmembrane region EFA59_08265 PF00005 ABC transporter EFA59_08265 PF00664 ABC transporter transmembrane region EFA59_08275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EFA59_08280 PF02378 Phosphotransferase system, EIIC EFA59_08285 PF00232 Glycosyl hydrolase family 1 EFA59_08290 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EFA59_08295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EFA59_08300 PF00232 Glycosyl hydrolase family 1 EFA59_08305 PF00392 Bacterial regulatory proteins, gntR family EFA59_08305 PF07702 UTRA domain EFA59_08315 PF00300 Histidine phosphatase superfamily (branch 1) EFA59_08330 PF03372 Endonuclease/Exonuclease/phosphatase family EFA59_08335 PF00465 Iron-containing alcohol dehydrogenase EFA59_08335 PF00171 Aldehyde dehydrogenase family EFA59_08340 PF00403 Heavy-metal-associated domain EFA59_08355 PF03965 Penicillinase repressor EFA59_08360 PF01431 Peptidase family M13 EFA59_08360 PF05649 Peptidase family M13 EFA59_08370 PF09364 XFP N-terminal domain EFA59_08370 PF09363 XFP C-terminal domain EFA59_08370 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EFA59_08375 PF00392 Bacterial regulatory proteins, gntR family EFA59_08375 PF07702 UTRA domain EFA59_08380 PF01966 HD domain EFA59_08400 PF00005 ABC transporter EFA59_08415 PF00248 Aldo/keto reductase family EFA59_08420 PF02610 L-arabinose isomerase EFA59_08420 PF11762 L-arabinose isomerase C-terminal domain EFA59_08425 PF00596 Class II Aldolase and Adducin N-terminal domain EFA59_08435 PF00392 Bacterial regulatory proteins, gntR family EFA59_08445 PF01554 MatE EFA59_08450 PF00083 Sugar (and other) transporter EFA59_08455 PF12848 ABC transporter EFA59_08455 PF00005 ABC transporter EFA59_08465 PF00005 ABC transporter EFA59_08475 PF01047 MarR family EFA59_08480 PF01757 Acyltransferase family EFA59_08500 PF00854 POT family EFA59_08530 PF01569 PAP2 superfamily EFA59_08535 PF00512 His Kinase A (phospho-acceptor) domain EFA59_08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_08540 PF00486 Transcriptional regulatory protein, C terminal EFA59_08540 PF00072 Response regulator receiver domain EFA59_08550 PF06071 Protein of unknown function (DUF933) EFA59_08550 PF01926 50S ribosome-binding GTPase EFA59_08560 PF02195 ParB-like nuclease domain EFA59_08560 PF17762 HTH domain found in ParB protein EFA59_08565 PF13614 AAA domain EFA59_08570 PF02527 rRNA small subunit methyltransferase G EFA59_08575 PF01156 Inosine-uridine preferring nucleoside hydrolase EFA59_08580 PF00730 HhH-GPD superfamily base excision DNA repair protein EFA59_08580 PF14815 NUDIX domain EFA59_08585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EFA59_08590 PF00512 His Kinase A (phospho-acceptor) domain EFA59_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EFA59_08595 PF00072 Response regulator receiver domain EFA59_08595 PF00486 Transcriptional regulatory protein, C terminal EFA59_08600 PF13520 Amino acid permease EFA59_08610 PF13193 AMP-binding enzyme C-terminal domain EFA59_08610 PF00501 AMP-binding enzyme EFA59_08615 PF00378 Enoyl-CoA hydratase/isomerase EFA59_08620 PF03061 Thioesterase superfamily EFA59_08630 PF02229 Transcriptional Coactivator p15 (PC4) EFA59_08635 PF17763 Glutaminase/Asparaginase C-terminal domain EFA59_08635 PF00710 Asparaginase, N-terminal EFA59_08645 PF00324 Amino acid permease EFA59_08655 PF13520 Amino acid permease EFA59_08660 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_08660 PF00107 Zinc-binding dehydrogenase EFA59_08665 PF04608 Phosphatidylglycerophosphatase A EFA59_08670 PF00230 Major intrinsic protein EFA59_08680 PF03853 YjeF-related protein N-terminus EFA59_08690 PF07690 Major Facilitator Superfamily EFA59_08695 PF03610 PTS system fructose IIA component EFA59_08695 PF03830 PTS system sorbose subfamily IIB component EFA59_08705 PF01380 SIS domain EFA59_08710 PF03613 PTS system mannose/fructose/sorbose family IID component EFA59_08715 PF03609 PTS system sorbose-specific iic component EFA59_08720 PF03830 PTS system sorbose subfamily IIB component EFA59_08725 PF00392 Bacterial regulatory proteins, gntR family EFA59_08725 PF07702 UTRA domain EFA59_08730 PF00392 Bacterial regulatory proteins, gntR family EFA59_08730 PF07702 UTRA domain EFA59_08735 PF13520 Amino acid permease EFA59_08750 PF03601 Conserved hypothetical protein 698 EFA59_08755 PF01207 Dihydrouridine synthase (Dus) EFA59_08770 PF00171 Aldehyde dehydrogenase family EFA59_08790 PF00664 ABC transporter transmembrane region EFA59_08790 PF00005 ABC transporter EFA59_08790 PF03412 Peptidase C39 family EFA59_08830 PF00324 Amino acid permease EFA59_08840 PF02655 ATP-grasp domain EFA59_08840 PF18419 ATP-grasp-like domain EFA59_08840 PF04262 Glutamate-cysteine ligase EFA59_08845 PF01594 AI-2E family transporter EFA59_08855 PF00708 Acylphosphatase EFA59_08860 PF00497 Bacterial extracellular solute-binding proteins, family 3 EFA59_08865 PF00528 Binding-protein-dependent transport system inner membrane component EFA59_08870 PF00005 ABC transporter EFA59_08880 PF00248 Aldo/keto reductase family EFA59_08885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EFA59_08885 PF00056 lactate/malate dehydrogenase, NAD binding domain EFA59_08895 PF01565 FAD binding domain EFA59_08895 PF02913 FAD linked oxidases, C-terminal domain EFA59_08900 PF02361 Cobalt transport protein EFA59_08905 PF00005 ABC transporter EFA59_08905 PF12558 ATP-binding cassette cobalt transporter EFA59_08910 PF07155 ECF-type riboflavin transporter, S component EFA59_08915 PF05958 tRNA (Uracil-5-)-methyltransferase EFA59_08915 PF01938 TRAM domain EFA59_08920 PF04607 Region found in RelA / SpoT proteins EFA59_08925 PF02608 ABC transporter substrate-binding protein PnrA-like EFA59_08930 PF02540 NAD synthase EFA59_08930 PF00958 GMP synthase C terminal domain EFA59_08930 PF00117 Glutamine amidotransferase class-I EFA59_08940 PF00171 Aldehyde dehydrogenase family EFA59_08945 PF00696 Amino acid kinase family EFA59_08950 PF00291 Pyridoxal-phosphate dependent enzyme EFA59_08955 PF01979 Amidohydrolase family EFA59_08965 PF00005 ABC transporter EFA59_08985 PF07739 TipAS antibiotic-recognition domain EFA59_08985 PF13411 MerR HTH family regulatory protein EFA59_08990 PF07690 Major Facilitator Superfamily EFA59_08995 PF02829 3H domain EFA59_08995 PF08279 HTH domain EFA59_09005 PF01717 Cobalamin-independent synthase, Catalytic domain EFA59_09015 PF07690 Major Facilitator Superfamily EFA59_09020 PF00860 Permease family EFA59_09025 PF01979 Amidohydrolase family EFA59_09030 PF02632 BioY family EFA59_09045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EFA59_09045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EFA59_09060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EFA59_09070 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EFA59_09075 PF01156 Inosine-uridine preferring nucleoside hydrolase EFA59_09095 PF00356 Bacterial regulatory proteins, lacI family EFA59_09100 PF02558 Ketopantoate reductase PanE/ApbA EFA59_09100 PF08546 Ketopantoate reductase PanE/ApbA C terminal EFA59_09105 PF01161 Phosphatidylethanolamine-binding protein EFA59_09110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EFA59_09110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EFA59_09115 PF00155 Aminotransferase class I and II EFA59_09120 PF00132 Bacterial transferase hexapeptide (six repeats) EFA59_09120 PF12464 Maltose acetyltransferase EFA59_09125 PF12464 Maltose acetyltransferase EFA59_09125 PF14602 Hexapeptide repeat of succinyl-transferase EFA59_09130 PF03600 Citrate transporter EFA59_09140 PF13520 Amino acid permease EFA59_09150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EFA59_09150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EFA59_09160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EFA59_09160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EFA59_09165 PF00860 Permease family EFA59_09180 PF00005 ABC transporter EFA59_09185 PF07729 FCD domain EFA59_09185 PF00392 Bacterial regulatory proteins, gntR family EFA59_09190 PF00075 RNase H EFA59_09200 PF02386 Cation transport protein EFA59_09205 PF02590 Predicted SPOUT methyltransferase EFA59_09215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EFA59_09215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EFA59_09215 PF00205 Thiamine pyrophosphate enzyme, central domain EFA59_09220 PF14602 Hexapeptide repeat of succinyl-transferase EFA59_09220 PF00132 Bacterial transferase hexapeptide (six repeats) EFA59_09220 PF12464 Maltose acetyltransferase EFA59_09225 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EFA59_09230 PF00106 short chain dehydrogenase EFA59_09235 PF13411 MerR HTH family regulatory protein EFA59_09240 PF00375 Sodium:dicarboxylate symporter family EFA59_09245 PF01546 Peptidase family M20/M25/M40 EFA59_09250 PF05690 Thiazole biosynthesis protein ThiG EFA59_09255 PF00899 ThiF family EFA59_09275 PF00324 Amino acid permease EFA59_09280 PF02254 TrkA-N domain EFA59_09280 PF02080 TrkA-C domain EFA59_09285 PF05031 Iron Transport-associated domain EFA59_09300 PF01032 FecCD transport family EFA59_09305 PF00005 ABC transporter EFA59_09315 PF10502 Signal peptidase, peptidase S26 EFA59_09320 PF02096 60Kd inner membrane protein EFA59_09325 PF00825 Ribonuclease P EFA59_09330 PF00468 Ribosomal protein L34 EFA59_09345 PF03649 Uncharacterised protein family (UPF0014) EFA59_09350 PF00005 ABC transporter EFA59_09360 PF01451 Low molecular weight phosphotyrosine protein phosphatase EFA59_09365 PF00005 ABC transporter EFA59_09365 PF17760 UvrA interaction domain EFA59_09365 PF17755 UvrA DNA-binding domain EFA59_09380 PF01051 Initiator Replication protein EFA59_09385 PF03432 Relaxase/Mobilisation nuclease domain EFA59_09395 PF07724 AAA domain (Cdc48 subfamily) EFA59_09395 PF17871 AAA lid domain EFA59_09395 PF00004 ATPase family associated with various cellular activities (AAA) EFA59_09395 PF10431 C-terminal, D2-small domain, of ClpB protein EFA59_09410 PF05552 Conserved TM helix EFA59_09440 PF00239 Resolvase, N terminal domain EFA59_09440 PF02796 Helix-turn-helix domain of resolvase EFA59_09460 PF01638 HxlR-like helix-turn-helix EFA59_09465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EFA59_09475 PF00342 Phosphoglucose isomerase EFA59_09480 PF01965 DJ-1/PfpI family EFA59_09485 PF01638 HxlR-like helix-turn-helix EFA59_09505 PF01451 Low molecular weight phosphotyrosine protein phosphatase EFA59_09520 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_09520 PF00107 Zinc-binding dehydrogenase EFA59_09535 PF00403 Heavy-metal-associated domain EFA59_09545 PF00210 Ferritin-like domain EFA59_09550 PF13545 Crp-like helix-turn-helix domain EFA59_09550 PF00027 Cyclic nucleotide-binding domain EFA59_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EFA59_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase EFA59_09590 PF08240 Alcohol dehydrogenase GroES-like domain EFA59_09590 PF00107 Zinc-binding dehydrogenase EFA59_09595 PF13276 HTH-like domain EFA59_09595 PF13333 Integrase core domain EFA59_09595 PF00665 Integrase core domain EFA59_09620 PF01051 Initiator Replication protein EFA59_09630 PF13333 Integrase core domain EFA59_09630 PF00665 Integrase core domain EFA59_09635 PF00005 ABC transporter EFA59_09635 PF17755 UvrA DNA-binding domain EFA59_09635 PF17760 UvrA interaction domain EFA59_09660 PF01022 Bacterial regulatory protein, arsR family EFA59_09670 PF00085 Thioredoxin EFA59_09675 PF00085 Thioredoxin