locus-tag class description WKK_00050 PF00403 Heavy-metal-associated domain WKK_00055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WKK_00090 PF08924 Domain of unknown function (DUF1906) WKK_00090 PF01471 Putative peptidoglycan binding domain WKK_00150 PF08240 Alcohol dehydrogenase GroES-like domain WKK_00150 PF00107 Zinc-binding dehydrogenase WKK_00155 PF07690 Major Facilitator Superfamily WKK_00165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WKK_00165 PF00205 Thiamine pyrophosphate enzyme, central domain WKK_00165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WKK_00170 PF10400 Virulence activator alpha C-term WKK_00170 PF03551 Transcriptional regulator PadR-like family WKK_00175 PF05870 Phenolic acid decarboxylase (PAD) WKK_00180 PF13545 Crp-like helix-turn-helix domain WKK_00205 PF16929 Accessory Sec system GspB-transporter WKK_00215 PF00344 SecY translocase WKK_00220 PF07517 SecA DEAD-like domain WKK_00220 PF07516 SecA Wing and Scaffold domain WKK_00220 PF01043 SecA preprotein cross-linking domain WKK_00235 PF00534 Glycosyl transferases group 1 WKK_00240 PF00860 Permease family WKK_00245 PF00403 Heavy-metal-associated domain WKK_00255 PF03965 Penicillinase repressor WKK_00260 PF13545 Crp-like helix-turn-helix domain WKK_00265 PF01546 Peptidase family M20/M25/M40 WKK_00270 PF03606 C4-dicarboxylate anaerobic carrier WKK_00275 PF07690 Major Facilitator Superfamily WKK_00280 PF00679 Elongation factor G C-terminus WKK_00280 PF00009 Elongation factor Tu GTP binding domain WKK_00280 PF06421 GTP-binding protein LepA C-terminus WKK_00290 PF00440 Bacterial regulatory proteins, tetR family WKK_00300 PF00005 ABC transporter WKK_00305 PF01116 Fructose-bisphosphate aldolase class-II WKK_00310 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) WKK_00315 PF00253 Ribosomal protein S14p/S29e WKK_00320 PF00471 Ribosomal protein L33 WKK_00330 PF01546 Peptidase family M20/M25/M40 WKK_00330 PF07687 Peptidase dimerisation domain WKK_00335 PF01784 NIF3 (NGG1p interacting factor 3) WKK_00340 PF04816 tRNA (adenine(22)-N(1))-methyltransferase WKK_00345 PF00334 Nucleoside diphosphate kinase WKK_00365 PF07690 Major Facilitator Superfamily WKK_00370 PF07155 ECF-type riboflavin transporter, S component WKK_00375 PF08543 Phosphomethylpyrimidine kinase WKK_00380 PF01367 5'-3' exonuclease, C-terminal SAM fold WKK_00380 PF00476 DNA polymerase family A WKK_00380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WKK_00390 PF13732 Domain of unknown function (DUF4162) WKK_00390 PF00005 ABC transporter WKK_00400 PF00107 Zinc-binding dehydrogenase WKK_00400 PF08240 Alcohol dehydrogenase GroES-like domain WKK_00405 PF01751 Toprim domain WKK_00405 PF01131 DNA topoisomerase WKK_00410 PF00478 IMP dehydrogenase / GMP reductase domain WKK_00415 PF02096 60Kd inner membrane protein WKK_00420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WKK_00420 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_00420 PF00403 Heavy-metal-associated domain WKK_00425 PF00528 Binding-protein-dependent transport system inner membrane component WKK_00430 PF00497 Bacterial extracellular solute-binding proteins, family 3 WKK_00440 PF13180 PDZ domain WKK_00440 PF05362 Lon protease (S16) C-terminal proteolytic domain WKK_00450 PF01467 Cytidylyltransferase-like WKK_00460 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) WKK_00465 PF01098 Cell cycle protein WKK_00475 PF00459 Inositol monophosphatase family WKK_00480 PF05256 Uncharacterised protein family (UPF0223) WKK_00485 PF01327 Polypeptide deformylase WKK_00495 PF02557 D-alanyl-D-alanine carboxypeptidase WKK_00505 PF17770 Ribonuclease J C-terminal domain WKK_00505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WKK_00505 PF00753 Metallo-beta-lactamase superfamily WKK_00510 PF00781 Diacylglycerol kinase catalytic domain WKK_00515 PF01368 DHH family WKK_00515 PF02833 DHHA2 domain WKK_00520 PF03989 DNA gyrase C-terminal domain, beta-propeller WKK_00520 PF00521 DNA gyrase/topoisomerase IV, subunit A WKK_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_00525 PF00986 DNA gyrase B subunit, carboxyl terminus WKK_00525 PF01751 Toprim domain WKK_00525 PF00204 DNA gyrase B WKK_00530 PF01205 Uncharacterized protein family UPF0029 WKK_00530 PF09186 Domain of unknown function (DUF1949) WKK_00535 PF09269 Domain of unknown function (DUF1967) WKK_00535 PF01018 GTP1/OBG WKK_00535 PF01926 50S ribosome-binding GTPase WKK_00540 PF08459 UvrC Helix-hairpin-helix N-terminal WKK_00540 PF02151 UvrB/uvrC motif WKK_00540 PF01541 GIY-YIG catalytic domain WKK_00545 PF00300 Histidine phosphatase superfamily (branch 1) WKK_00555 PF01746 tRNA (Guanine-1)-methyltransferase WKK_00560 PF05239 PRC-barrel domain WKK_00560 PF01782 RimM N-terminal domain WKK_00575 PF07690 Major Facilitator Superfamily WKK_00580 PF00886 Ribosomal protein S16 WKK_00585 PF00448 SRP54-type protein, GTPase domain WKK_00585 PF02978 Signal peptide binding domain WKK_00585 PF02881 SRP54-type protein, helical bundle domain WKK_00590 PF04297 Putative helix-turn-helix protein, YlxM / p13 like WKK_00595 PF00448 SRP54-type protein, GTPase domain WKK_00595 PF02881 SRP54-type protein, helical bundle domain WKK_00600 PF00035 Double-stranded RNA binding motif WKK_00600 PF14622 Ribonuclease-III-like WKK_00605 PF00550 Phosphopantetheine attachment site WKK_00610 PF02504 Fatty acid synthesis protein WKK_00615 PF00270 DEAD/DEAH box helicase WKK_00615 PF00271 Helicase conserved C-terminal domain WKK_00615 PF17191 RecG wedge domain WKK_00620 PF00860 Permease family WKK_00625 PF05746 DALR anticodon binding domain WKK_00625 PF00750 tRNA synthetases class I (R) WKK_00625 PF03485 Arginyl tRNA synthetase N terminal domain WKK_00635 PF02875 Mur ligase family, glutamate ligase domain WKK_00635 PF08245 Mur ligase middle domain WKK_00645 PF01435 Peptidase family M48 WKK_00650 PF04011 LemA family WKK_00655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WKK_00655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WKK_00655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WKK_00655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WKK_00660 PF13684 Dihydroxyacetone kinase family WKK_00660 PF02734 DAK2 domain WKK_00665 PF03780 Asp23 family, cell envelope-related function WKK_00670 PF00830 Ribosomal L28 family WKK_00675 PF04263 Thiamin pyrophosphokinase, catalytic domain WKK_00675 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain WKK_00680 PF00834 Ribulose-phosphate 3 epimerase family WKK_00685 PF03193 RsgA GTPase WKK_00685 PF16745 RsgA N-terminal domain WKK_00690 PF00069 Protein kinase domain WKK_00690 PF03793 PASTA domain WKK_00700 PF01189 16S rRNA methyltransferase RsmB/F WKK_00700 PF01029 NusB family WKK_00705 PF00551 Formyl transferase WKK_00705 PF02911 Formyl transferase, C-terminal domain WKK_00710 PF17764 3′ DNA-binding domain (3′BD) WKK_00710 PF00271 Helicase conserved C-terminal domain WKK_00710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WKK_00710 PF18074 Primosomal protein N C-terminal domain WKK_00710 PF04851 Type III restriction enzyme, res subunit WKK_00715 PF00871 Acetokinase family WKK_00740 PF08334 Type II secretion system (T2SS), protein G WKK_00740 PF07963 Prokaryotic N-terminal methylation motif WKK_00750 PF00437 Type II/IV secretion system protein WKK_00755 PF01709 Transcriptional regulator WKK_00760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WKK_00760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WKK_00765 PF01361 Tautomerase enzyme WKK_00770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) WKK_00770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 WKK_00775 PF00271 Helicase conserved C-terminal domain WKK_00775 PF00270 DEAD/DEAH box helicase WKK_00780 PF02272 DHHA1 domain WKK_00780 PF01368 DHH family WKK_00785 PF11799 impB/mucB/samB family C-terminal domain WKK_00785 PF00817 impB/mucB/samB family WKK_00790 PF02699 Preprotein translocase subunit WKK_00795 PF01702 Queuine tRNA-ribosyltransferase WKK_00800 PF02547 Queuosine biosynthesis protein WKK_00805 PF05496 Holliday junction DNA helicase RuvB P-loop domain WKK_00805 PF05491 RuvB C-terminal winged helix domain WKK_00805 PF17864 RuvB AAA lid domain WKK_00810 PF01330 RuvA N terminal domain WKK_00810 PF07499 RuvA, C-terminal domain WKK_00820 PF02481 DNA recombination-mediator protein A WKK_00820 PF18255 DNA processing protein A sterile alpha motif domain WKK_00825 PF01351 Ribonuclease HII WKK_00830 PF01926 50S ribosome-binding GTPase WKK_00835 PF06855 YozE SAM-like fold WKK_00850 PF02645 Uncharacterised protein, DegV family COG1307 WKK_00855 PF02645 Uncharacterised protein, DegV family COG1307 WKK_00865 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_00865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WKK_00870 PF18719 ArlS sensor domain WKK_00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_00870 PF00512 His Kinase A (phospho-acceptor) domain WKK_00875 PF00072 Response regulator receiver domain WKK_00875 PF00486 Transcriptional regulatory protein, C terminal WKK_00890 PF01695 IstB-like ATP binding protein WKK_00890 PF07319 Primosomal protein DnaI N-terminus WKK_00900 PF01121 Dephospho-CoA kinase WKK_00905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WKK_00905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WKK_00905 PF06827 Zinc finger found in FPG and IleRS WKK_00915 PF01751 Toprim domain WKK_00915 PF01396 Topoisomerase DNA binding C4 zinc finger WKK_00915 PF01131 DNA topoisomerase WKK_00920 PF02390 Putative methyltransferase WKK_00925 PF01230 HIT domain WKK_00935 PF06993 Protein of unknown function (DUF1304) WKK_00940 PF03073 TspO/MBR family WKK_00955 PF12464 Maltose acetyltransferase WKK_00955 PF00132 Bacterial transferase hexapeptide (six repeats) WKK_00955 PF14602 Hexapeptide repeat of succinyl-transferase WKK_00960 PF00106 short chain dehydrogenase WKK_00965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_00965 PF03466 LysR substrate binding domain WKK_00970 PF04226 Transglycosylase associated protein WKK_00995 PF05532 CsbD-like WKK_01010 PF04226 Transglycosylase associated protein WKK_01020 PF13684 Dihydroxyacetone kinase family WKK_01020 PF02734 DAK2 domain WKK_01025 PF14552 Tautomerase enzyme WKK_01035 PF01451 Low molecular weight phosphotyrosine protein phosphatase WKK_01040 PF08241 Methyltransferase domain WKK_01045 PF08000 Bacterial PH domain WKK_01060 PF13302 Acetyltransferase (GNAT) domain WKK_01150 PF14659 Phage integrase, N-terminal SAM-like domain WKK_01150 PF00589 Phage integrase family WKK_01155 PF00356 Bacterial regulatory proteins, lacI family WKK_01160 PF00557 Metallopeptidase family M24 WKK_01160 PF01321 Creatinase/Prolidase N-terminal domain WKK_01165 PF00268 Ribonucleotide reductase, small chain WKK_01170 PF08343 Ribonucleotide reductase N-terminal WKK_01170 PF02867 Ribonucleotide reductase, barrel domain WKK_01170 PF00317 Ribonucleotide reductase, all-alpha domain WKK_01175 PF00462 Glutaredoxin WKK_01180 PF07972 NrdI Flavodoxin like WKK_01185 PF01047 MarR family WKK_01190 PF06827 Zinc finger found in FPG and IleRS WKK_01190 PF00133 tRNA synthetases class I (I, L, M and V) WKK_01190 PF08264 Anticodon-binding domain of tRNA WKK_01195 PF05103 DivIVA protein WKK_01210 PF04472 Cell division protein SepF WKK_01215 PF12327 FtsZ family, C-terminal domain WKK_01215 PF00091 Tubulin/FtsZ family, GTPase domain WKK_01220 PF02491 SHS2 domain inserted in FTSA WKK_01220 PF11983 Membrane-attachment and polymerisation-promoting switch WKK_01225 PF08478 POTRA domain, FtsQ-type WKK_01225 PF03799 Cell division protein FtsQ WKK_01230 PF04101 Glycosyltransferase family 28 C-terminal domain WKK_01230 PF03033 Glycosyltransferase family 28 N-terminal domain WKK_01235 PF01225 Mur ligase family, catalytic domain WKK_01235 PF02875 Mur ligase family, glutamate ligase domain WKK_01235 PF08245 Mur ligase middle domain WKK_01240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WKK_01240 PF00953 Glycosyl transferase family 4 WKK_01255 PF01795 MraW methylase family WKK_01260 PF02381 MraZ protein, putative antitoxin-like WKK_01270 PF04452 RNA methyltransferase WKK_01280 PF00324 Amino acid permease WKK_01295 PF04085 rod shape-determining protein MreC WKK_01305 PF04002 RadC-like JAB domain WKK_01340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase WKK_01345 PF02311 AraC-like ligand binding domain WKK_01345 PF12833 Helix-turn-helix domain WKK_01350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain WKK_01350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain WKK_01355 PF08544 GHMP kinases C terminal WKK_01355 PF00288 GHMP kinases N terminal domain WKK_01355 PF10509 Galactokinase galactose-binding signature WKK_01360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 WKK_01390 PF01197 Ribosomal protein L31 WKK_01395 PF03144 Elongation factor Tu domain 2 WKK_01395 PF06421 GTP-binding protein LepA C-terminus WKK_01395 PF00009 Elongation factor Tu GTP binding domain WKK_01395 PF00679 Elongation factor G C-terminus WKK_01400 PF01245 Ribosomal protein L19 WKK_01405 PF03358 NADPH-dependent FMN reductase WKK_01410 PF01336 OB-fold nucleic acid binding domain WKK_01410 PF01966 HD domain WKK_01415 PF13514 AAA domain WKK_01420 PF00149 Calcineurin-like phosphoesterase WKK_01425 PF06133 Control of competence regulator ComK, YlbF/YmcA WKK_01430 PF00905 Penicillin binding protein transpeptidase domain WKK_01430 PF00912 Transglycosylase WKK_01435 PF01316 Arginine repressor, DNA binding domain WKK_01435 PF02863 Arginine repressor, C-terminal domain WKK_01445 PF00005 ABC transporter WKK_01450 PF01649 Ribosomal protein S20 WKK_01455 PF00312 Ribosomal protein S15 WKK_01460 PF06144 DNA polymerase III, delta subunit WKK_01465 PF00753 Metallo-beta-lactamase superfamily WKK_01465 PF13567 Domain of unknown function (DUF4131) WKK_01465 PF03772 Competence protein WKK_01470 PF10531 SLBB domain WKK_01490 PF06949 Protein of unknown function (DUF1292) WKK_01495 PF06949 Protein of unknown function (DUF1292) WKK_01500 PF03652 Holliday junction resolvase WKK_01505 PF06135 IreB regulatory phosphoprotein WKK_01510 PF02272 DHHA1 domain WKK_01510 PF01411 tRNA synthetases class II (A) WKK_01510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WKK_01515 PF07690 Major Facilitator Superfamily WKK_01520 PF03448 MgtE intracellular N domain WKK_01520 PF01769 Divalent cation transporter WKK_01520 PF00571 CBS domain WKK_01525 PF00849 RNA pseudouridylate synthase WKK_01530 PF01513 ATP-NAD kinase WKK_01535 PF04607 Region found in RelA / SpoT proteins WKK_01540 PF03275 UDP-galactopyranose mutase WKK_01545 PF00535 Glycosyl transferase family 2 WKK_01555 PF01192 RNA polymerase Rpb6 WKK_01560 PF00625 Guanylate kinase WKK_01565 PF13476 AAA domain WKK_01570 PF01316 Arginine repressor, DNA binding domain WKK_01570 PF02863 Arginine repressor, C-terminal domain WKK_01575 PF01728 FtsJ-like methyltransferase WKK_01575 PF01479 S4 domain WKK_01580 PF00348 Polyprenyl synthetase WKK_01585 PF02609 Exonuclease VII small subunit WKK_01590 PF13742 OB-fold nucleic acid binding domain WKK_01590 PF02601 Exonuclease VII, large subunit WKK_01595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WKK_01595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WKK_01600 PF00270 DEAD/DEAH box helicase WKK_01600 PF00271 Helicase conserved C-terminal domain WKK_01605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WKK_01610 PF05958 tRNA (Uracil-5-)-methyltransferase WKK_01610 PF01938 TRAM domain WKK_01615 PF02875 Mur ligase family, glutamate ligase domain WKK_01615 PF08245 Mur ligase middle domain WKK_01620 PF10458 Valyl tRNA synthetase tRNA binding arm WKK_01620 PF00133 tRNA synthetases class I (I, L, M and V) WKK_01620 PF08264 Anticodon-binding domain of tRNA WKK_01635 PF00528 Binding-protein-dependent transport system inner membrane component WKK_01640 PF00571 CBS domain WKK_01640 PF00005 ABC transporter WKK_01645 PF00582 Universal stress protein family WKK_01665 PF12002 MgsA AAA+ ATPase C terminal WKK_01665 PF16193 AAA C-terminal domain WKK_01665 PF05496 Holliday junction DNA helicase RuvB P-loop domain WKK_01670 PF16658 Class II release factor RF3, C-terminal domain WKK_01670 PF00009 Elongation factor Tu GTP binding domain WKK_01670 PF03144 Elongation factor Tu domain 2 WKK_01680 PF01451 Low molecular weight phosphotyrosine protein phosphatase WKK_01685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WKK_01685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WKK_01690 PF00248 Aldo/keto reductase family WKK_01695 PF00083 Sugar (and other) transporter WKK_01700 PF02610 L-arabinose isomerase WKK_01700 PF11762 L-arabinose isomerase C-terminal domain WKK_01705 PF00596 Class II Aldolase and Adducin N-terminal domain WKK_01715 PF01306 LacY proton/sugar symporter WKK_01720 PF04616 Glycosyl hydrolases family 43 WKK_01720 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain WKK_01725 PF00392 Bacterial regulatory proteins, gntR family WKK_01730 PF00990 Diguanylate cyclase, GGDEF domain WKK_01750 PF00391 PEP-utilising enzyme, mobile domain WKK_01750 PF00224 Pyruvate kinase, barrel domain WKK_01750 PF02887 Pyruvate kinase, alpha/beta domain WKK_01755 PF00005 ABC transporter WKK_01760 PF02653 Branched-chain amino acid transport system / permease component WKK_01770 PF12822 ECF transporter, substrate-specific component WKK_01780 PF07690 Major Facilitator Superfamily WKK_01790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WKK_01795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WKK_01800 PF01545 Cation efflux family WKK_01810 PF00485 Phosphoribulokinase / Uridine kinase family WKK_01815 PF13538 UvrD-like helicase C-terminal domain WKK_01825 PF03613 PTS system mannose/fructose/sorbose family IID component WKK_01830 PF03609 PTS system sorbose-specific iic component WKK_01835 PF03610 PTS system fructose IIA component WKK_01835 PF03830 PTS system sorbose subfamily IIB component WKK_01850 PF03932 CutC family WKK_01885 PF07501 G5 domain WKK_01885 PF00728 Glycosyl hydrolase family 20, catalytic domain WKK_01885 PF00746 LPXTG cell wall anchor motif WKK_01885 PF04650 YSIRK type signal peptide WKK_01915 PF00884 Sulfatase WKK_01930 PF13439 Glycosyltransferase Family 4 WKK_01930 PF00534 Glycosyl transferases group 1 WKK_01935 PF00534 Glycosyl transferases group 1 WKK_01935 PF13439 Glycosyltransferase Family 4 WKK_01945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WKK_01945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WKK_01945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WKK_01945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WKK_01950 PF07949 YbbR-like protein WKK_01955 PF02457 DisA bacterial checkpoint controller nucleotide-binding WKK_01960 PF00999 Sodium/hydrogen exchanger family WKK_01965 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WKK_01965 PF01565 FAD binding domain WKK_01970 PF14579 Helix-hairpin-helix motif WKK_01970 PF02811 PHP domain WKK_01970 PF00929 Exonuclease WKK_01970 PF07733 Bacterial DNA polymerase III alpha NTPase domain WKK_01970 PF11490 DNA polymerase III polC-type N-terminus II WKK_01970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WKK_01970 PF14480 DNA polymerase III polC-type N-terminus I WKK_01980 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WKK_01985 PF01515 Phosphate acetyl/butaryl transferase WKK_01990 PF03167 Uracil DNA glycosylase superfamily WKK_02005 PF04024 PspC domain WKK_02015 PF03551 Transcriptional regulator PadR-like family WKK_02020 PF01475 Ferric uptake regulator family WKK_02030 PF03060 Nitronate monooxygenase WKK_02040 PF02595 Glycerate kinase family WKK_02045 PF00557 Metallopeptidase family M24 WKK_02075 PF13411 MerR HTH family regulatory protein WKK_02080 PF00248 Aldo/keto reductase family WKK_02090 PF07690 Major Facilitator Superfamily WKK_02100 PF00005 ABC transporter WKK_02105 PF02687 FtsX-like permease family WKK_02120 PF01016 Ribosomal L27 protein WKK_02125 PF00829 Ribosomal prokaryotic L21 protein WKK_02130 PF00772 DnaB-like helicase N terminal domain WKK_02130 PF03796 DnaB-like helicase C terminal domain WKK_02135 PF01281 Ribosomal protein L9, N-terminal domain WKK_02135 PF03948 Ribosomal protein L9, C-terminal domain WKK_02140 PF02272 DHHA1 domain WKK_02140 PF01368 DHH family WKK_02145 PF00528 Binding-protein-dependent transport system inner membrane component WKK_02150 PF00528 Binding-protein-dependent transport system inner membrane component WKK_02155 PF00497 Bacterial extracellular solute-binding proteins, family 3 WKK_02160 PF00005 ABC transporter WKK_02165 PF00625 Guanylate kinase WKK_02170 PF01546 Peptidase family M20/M25/M40 WKK_02175 PF12704 MacB-like periplasmic core domain WKK_02175 PF02687 FtsX-like permease family WKK_02175 PF00005 ABC transporter WKK_02180 PF00664 ABC transporter transmembrane region WKK_02180 PF00005 ABC transporter WKK_02185 PF00664 ABC transporter transmembrane region WKK_02185 PF00005 ABC transporter WKK_02195 PF00300 Histidine phosphatase superfamily (branch 1) WKK_02200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WKK_02200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WKK_02205 PF00294 pfkB family carbohydrate kinase WKK_02220 PF00356 Bacterial regulatory proteins, lacI family WKK_02225 PF03372 Endonuclease/Exonuclease/phosphatase family WKK_02240 PF03807 NADP oxidoreductase coenzyme F420-dependent WKK_02240 PF14748 Pyrroline-5-carboxylate reductase dimerisation WKK_02245 PF01098 Cell cycle protein WKK_02260 PF01225 Mur ligase family, catalytic domain WKK_02260 PF08245 Mur ligase middle domain WKK_02260 PF02875 Mur ligase family, glutamate ligase domain WKK_02265 PF00149 Calcineurin-like phosphoesterase WKK_02265 PF02872 5'-nucleotidase, C-terminal domain WKK_02275 PF02581 Thiamine monophosphate synthase WKK_02280 PF08543 Phosphomethylpyrimidine kinase WKK_02285 PF02110 Hydroxyethylthiazole kinase family WKK_02300 PF02929 Beta galactosidase small chain WKK_02305 PF00703 Glycosyl hydrolases family 2 WKK_02305 PF02836 Glycosyl hydrolases family 2, TIM barrel domain WKK_02305 PF02837 Glycosyl hydrolases family 2, sugar binding domain WKK_02310 PF00300 Histidine phosphatase superfamily (branch 1) WKK_02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_02330 PF00561 alpha/beta hydrolase fold WKK_02335 PF01638 HxlR-like helix-turn-helix WKK_02345 PF00588 SpoU rRNA Methylase family WKK_02345 PF08032 RNA 2'-O ribose methyltransferase substrate binding WKK_02350 PF02388 FemAB family WKK_02355 PF03462 PCRF domain WKK_02355 PF00472 RF-1 domain WKK_02360 PF07516 SecA Wing and Scaffold domain WKK_02360 PF01043 SecA preprotein cross-linking domain WKK_02360 PF07517 SecA DEAD-like domain WKK_02365 PF01256 Carbohydrate kinase WKK_02375 PF00579 tRNA synthetases class I (W and Y) WKK_02380 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system WKK_02385 PF01168 Alanine racemase, N-terminal domain WKK_02385 PF00842 Alanine racemase, C-terminal domain WKK_02390 PF00271 Helicase conserved C-terminal domain WKK_02390 PF00270 DEAD/DEAH box helicase WKK_02395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WKK_02400 PF00117 Glutamine amidotransferase class-I WKK_02400 PF06418 CTP synthase N-terminus WKK_02405 PF05066 HB1, ASXL, restriction endonuclease HTH domain WKK_02410 PF04321 RmlD substrate binding domain WKK_02415 PF16363 GDP-mannose 4,6 dehydratase WKK_02420 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WKK_02425 PF00483 Nucleotidyl transferase WKK_02430 PF13439 Glycosyltransferase Family 4 WKK_02430 PF00534 Glycosyl transferases group 1 WKK_02440 PF00535 Glycosyl transferase family 2 WKK_02460 PF17102 Stealth protein CR3, conserved region 3 WKK_02460 PF17101 Stealth protein CR1, conserved region 1 WKK_02460 PF11380 Stealth protein CR2, conserved region 2 WKK_02465 PF13439 Glycosyltransferase Family 4 WKK_02465 PF00534 Glycosyl transferases group 1 WKK_02470 PF01966 HD domain WKK_02480 PF13180 PDZ domain WKK_02485 PF00753 Metallo-beta-lactamase superfamily WKK_02500 PF00989 PAS fold WKK_02500 PF00672 HAMP domain WKK_02500 PF00512 His Kinase A (phospho-acceptor) domain WKK_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_02505 PF00486 Transcriptional regulatory protein, C terminal WKK_02505 PF00072 Response regulator receiver domain WKK_02510 PF01084 Ribosomal protein S18 WKK_02515 PF00436 Single-strand binding protein family WKK_02520 PF01250 Ribosomal protein S6 WKK_02525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WKK_02525 PF14572 Phosphoribosyl synthetase-associated domain WKK_02530 PF00132 Bacterial transferase hexapeptide (six repeats) WKK_02530 PF12804 MobA-like NTP transferase domain WKK_02535 PF09182 Bacterial purine repressor, N-terminal WKK_02535 PF00156 Phosphoribosyl transferase domain WKK_02540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WKK_02540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WKK_02545 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain WKK_02545 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain WKK_02550 PF00580 UvrD/REP helicase N-terminal domain WKK_02550 PF13361 UvrD-like helicase C-terminal domain WKK_02550 PF12705 PD-(D/E)XK nuclease superfamily WKK_02555 PF12705 PD-(D/E)XK nuclease superfamily WKK_02560 PF14437 MafB19-like deaminase WKK_02565 PF05175 Methyltransferase small domain WKK_02580 PF08240 Alcohol dehydrogenase GroES-like domain WKK_02580 PF00107 Zinc-binding dehydrogenase WKK_02585 PF01196 Ribosomal protein L17 WKK_02590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WKK_02590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WKK_02590 PF01000 RNA polymerase Rpb3/RpoA insert domain WKK_02595 PF00411 Ribosomal protein S11 WKK_02600 PF00416 Ribosomal protein S13/S18 WKK_02605 PF00444 Ribosomal protein L36 WKK_02610 PF01176 Translation initiation factor 1A / IF-1 WKK_02615 PF05191 Adenylate kinase, active site lid WKK_02620 PF00344 SecY translocase WKK_02625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WKK_02630 PF00327 Ribosomal protein L30p/L7e WKK_02635 PF00333 Ribosomal protein S5, N-terminal domain WKK_02635 PF03719 Ribosomal protein S5, C-terminal domain WKK_02640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WKK_02645 PF00347 Ribosomal protein L6 WKK_02650 PF00410 Ribosomal protein S8 WKK_02655 PF00281 Ribosomal protein L5 WKK_02655 PF00673 ribosomal L5P family C-terminus WKK_02660 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WKK_02660 PF00467 KOW motif WKK_02665 PF00238 Ribosomal protein L14p/L23e WKK_02670 PF00366 Ribosomal protein S17 WKK_02675 PF00831 Ribosomal L29 protein WKK_02680 PF00252 Ribosomal protein L16p/L10e WKK_02685 PF00189 Ribosomal protein S3, C-terminal domain WKK_02685 PF07650 KH domain WKK_02690 PF00237 Ribosomal protein L22p/L17e WKK_02695 PF00203 Ribosomal protein S19 WKK_02700 PF00181 Ribosomal Proteins L2, RNA binding domain WKK_02700 PF03947 Ribosomal Proteins L2, C-terminal domain WKK_02705 PF00276 Ribosomal protein L23 WKK_02710 PF00573 Ribosomal protein L4/L1 family WKK_02715 PF00297 Ribosomal protein L3 WKK_02720 PF00338 Ribosomal protein S10p/S20e WKK_02735 PF00534 Glycosyl transferases group 1 WKK_02735 PF13439 Glycosyltransferase Family 4 WKK_02750 PF13439 Glycosyltransferase Family 4 WKK_02750 PF00534 Glycosyl transferases group 1 WKK_02760 PF03808 Glycosyl transferase WecB/TagA/CpsF family WKK_02765 PF01943 Polysaccharide biosynthesis protein WKK_02785 PF02397 Bacterial sugar transferase WKK_02800 PF02350 UDP-N-acetylglucosamine 2-epimerase WKK_02810 PF00814 Glycoprotease family WKK_02815 PF00583 Acetyltransferase (GNAT) family WKK_02825 PF00814 Glycoprotease family WKK_02840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WKK_02840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WKK_02845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WKK_02845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WKK_02855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WKK_02855 PF02403 Seryl-tRNA synthetase N-terminal domain WKK_02860 PF01712 Deoxynucleoside kinase WKK_02865 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WKK_02865 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain WKK_02870 PF02874 ATP synthase alpha/beta family, beta-barrel domain WKK_02870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WKK_02875 PF00231 ATP synthase WKK_02880 PF02874 ATP synthase alpha/beta family, beta-barrel domain WKK_02880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WKK_02880 PF00306 ATP synthase alpha/beta chain, C terminal domain WKK_02885 PF00213 ATP synthase delta (OSCP) subunit WKK_02890 PF00430 ATP synthase B/B' CF(0) WKK_02895 PF00137 ATP synthase subunit C WKK_02900 PF00119 ATP synthase A chain WKK_02910 PF00464 Serine hydroxymethyltransferase WKK_02915 PF01300 Telomere recombination WKK_02915 PF03481 Putative GTP-binding controlling metal-binding WKK_02920 PF17827 PrmC N-terminal domain WKK_02920 PF05175 Methyltransferase small domain WKK_02925 PF00472 RF-1 domain WKK_02925 PF03462 PCRF domain WKK_02930 PF00265 Thymidine kinase WKK_02935 PF07685 CobB/CobQ-like glutamine amidotransferase domain WKK_02940 PF08245 Mur ligase middle domain WKK_02940 PF08353 Domain of unknown function (DUF1727) WKK_02950 PF13520 Amino acid permease WKK_02965 PF08241 Methyltransferase domain WKK_02970 PF13520 Amino acid permease WKK_02975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain WKK_02975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WKK_02990 PF14667 Polysaccharide biosynthesis C-terminal domain WKK_02990 PF01943 Polysaccharide biosynthesis protein WKK_02995 PF07943 Penicillin-binding protein 5, C-terminal domain WKK_02995 PF00768 D-alanyl-D-alanine carboxypeptidase WKK_03000 PF13603 Leucyl-tRNA synthetase, Domain 2 WKK_03000 PF00133 tRNA synthetases class I (I, L, M and V) WKK_03000 PF08264 Anticodon-binding domain of tRNA WKK_03000 PF09334 tRNA synthetases class I (M) WKK_03005 PF01569 PAP2 superfamily WKK_03010 PF01795 MraW methylase family WKK_03015 PF01938 TRAM domain WKK_03015 PF05958 tRNA (Uracil-5-)-methyltransferase WKK_03020 PF05525 Branched-chain amino acid transport protein WKK_03025 PF13520 Amino acid permease WKK_03030 PF03577 Peptidase family C69 WKK_03035 PF13520 Amino acid permease WKK_03050 PF01156 Inosine-uridine preferring nucleoside hydrolase WKK_03055 PF00005 ABC transporter WKK_03060 PF12704 MacB-like periplasmic core domain WKK_03060 PF02687 FtsX-like permease family WKK_03065 PF00438 S-adenosylmethionine synthetase, N-terminal domain WKK_03065 PF02772 S-adenosylmethionine synthetase, central domain WKK_03065 PF02773 S-adenosylmethionine synthetase, C-terminal domain WKK_03070 PF08664 YcbB domain WKK_03070 PF00072 Response regulator receiver domain WKK_03075 PF01590 GAF domain WKK_03075 PF08446 PAS fold WKK_03075 PF00512 His Kinase A (phospho-acceptor) domain WKK_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_03075 PF00360 Phytochrome region WKK_03080 PF03606 C4-dicarboxylate anaerobic carrier WKK_03085 PF06800 Sugar transport protein WKK_03090 PF05025 RbsD / FucU transport protein family WKK_03095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WKK_03095 PF00294 pfkB family carbohydrate kinase WKK_03100 PF03600 Citrate transporter WKK_03115 PF00893 Small Multidrug Resistance protein WKK_03130 PF00571 CBS domain WKK_03130 PF00005 ABC transporter WKK_03135 PF00528 Binding-protein-dependent transport system inner membrane component WKK_03140 PF01037 Lrp/AsnC ligand binding domain WKK_03150 PF00542 Ribosomal protein L7/L12 C-terminal domain WKK_03150 PF16320 Ribosomal protein L7/L12 dimerisation domain WKK_03155 PF00466 Ribosomal protein L10 WKK_03160 PF00687 Ribosomal protein L1p/L10e family WKK_03165 PF03946 Ribosomal protein L11, N-terminal domain WKK_03165 PF00298 Ribosomal protein L11, RNA binding domain WKK_03170 PF02357 Transcription termination factor nusG WKK_03170 PF00467 KOW motif WKK_03180 PF00471 Ribosomal protein L33 WKK_03190 PF08032 RNA 2'-O ribose methyltransferase substrate binding WKK_03190 PF00588 SpoU rRNA Methylase family WKK_03195 PF00636 Ribonuclease III domain WKK_03200 PF09190 DALR domain WKK_03200 PF01406 tRNA synthetases class I (C) catalytic domain WKK_03205 PF02540 NAD synthase WKK_03210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WKK_03210 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain WKK_03210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WKK_03220 PF03180 NLPA lipoprotein WKK_03225 PF09383 NIL domain WKK_03225 PF00005 ABC transporter WKK_03230 PF00528 Binding-protein-dependent transport system inner membrane component WKK_03240 PF01238 Phosphomannose isomerase type I WKK_03255 PF03006 Haemolysin-III related WKK_03260 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase WKK_03260 PF09363 XFP C-terminal domain WKK_03260 PF09364 XFP N-terminal domain WKK_03265 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin WKK_03270 PF07702 UTRA domain WKK_03270 PF00392 Bacterial regulatory proteins, gntR family WKK_03275 PF07690 Major Facilitator Superfamily WKK_03295 PF05738 Cna protein B-type domain WKK_03295 PF05737 Collagen binding domain WKK_03295 PF17802 Prealbumin-like fold domain WKK_03300 PF00005 ABC transporter WKK_03300 PF12848 ABC transporter WKK_03305 PF00950 ABC 3 transport family WKK_03310 PF00005 ABC transporter WKK_03320 PF01047 MarR family WKK_03325 PF01757 Acyltransferase family WKK_03335 PF00854 POT family WKK_03340 PF00376 MerR family regulatory protein WKK_03340 PF09278 MerR, DNA binding WKK_03345 PF00106 short chain dehydrogenase WKK_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_03355 PF18698 Histidine kinase sensor domain WKK_03355 PF00512 His Kinase A (phospho-acceptor) domain WKK_03355 PF00672 HAMP domain WKK_03355 PF00989 PAS fold WKK_03360 PF00486 Transcriptional regulatory protein, C terminal WKK_03360 PF00072 Response regulator receiver domain WKK_03370 PF01926 50S ribosome-binding GTPase WKK_03370 PF06071 Protein of unknown function (DUF933) WKK_03375 PF06107 Bacterial protein of unknown function (DUF951) WKK_03380 PF17762 HTH domain found in ParB protein WKK_03380 PF02195 ParB-like nuclease domain WKK_03385 PF13614 AAA domain WKK_03390 PF02527 rRNA small subunit methyltransferase G WKK_03395 PF01207 Dihydrouridine synthase (Dus) WKK_03405 PF07859 alpha/beta hydrolase fold WKK_03415 PF01594 AI-2E family transporter WKK_03420 PF00708 Acylphosphatase WKK_03425 PF01161 Phosphatidylethanolamine-binding protein WKK_03430 PF02909 Tetracyclin repressor-like, C-terminal domain WKK_03430 PF00440 Bacterial regulatory proteins, tetR family WKK_03435 PF00106 short chain dehydrogenase WKK_03440 PF13411 MerR HTH family regulatory protein WKK_03445 PF05958 tRNA (Uracil-5-)-methyltransferase WKK_03445 PF01938 TRAM domain WKK_03450 PF12822 ECF transporter, substrate-specific component WKK_03455 PF02540 NAD synthase WKK_03455 PF00117 Glutamine amidotransferase class-I WKK_03455 PF00958 GMP synthase C terminal domain WKK_03470 PF02082 Transcriptional regulator WKK_03480 PF07690 Major Facilitator Superfamily WKK_03490 PF01546 Peptidase family M20/M25/M40 WKK_03490 PF07687 Peptidase dimerisation domain WKK_03505 PF05368 NmrA-like family WKK_03510 PF00248 Aldo/keto reductase family WKK_03515 PF09335 SNARE associated Golgi protein WKK_03525 PF00075 RNase H WKK_03535 PF02386 Cation transport protein WKK_03540 PF02590 Predicted SPOUT methyltransferase WKK_03560 PF00005 ABC transporter WKK_03565 PF01381 Helix-turn-helix WKK_03635 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_03640 PF00085 Thioredoxin WKK_03645 PF00085 Thioredoxin WKK_03650 PF00085 Thioredoxin WKK_03660 PF13545 Crp-like helix-turn-helix domain WKK_03665 PF00534 Glycosyl transferases group 1 WKK_03685 PF00561 alpha/beta hydrolase fold WKK_03690 PF00248 Aldo/keto reductase family WKK_03700 PF03466 LysR substrate binding domain WKK_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_03710 PF05738 Cna protein B-type domain WKK_03710 PF17802 Prealbumin-like fold domain WKK_03710 PF05737 Collagen binding domain WKK_03720 PF00107 Zinc-binding dehydrogenase WKK_03720 PF08240 Alcohol dehydrogenase GroES-like domain WKK_03725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WKK_03735 PF13411 MerR HTH family regulatory protein WKK_03740 PF03466 LysR substrate binding domain WKK_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_03750 PF02308 MgtC family WKK_03755 PF08240 Alcohol dehydrogenase GroES-like domain WKK_03755 PF00107 Zinc-binding dehydrogenase WKK_03765 PF16193 AAA C-terminal domain WKK_03765 PF00004 ATPase family associated with various cellular activities (AAA) WKK_03765 PF12002 MgsA AAA+ ATPase C terminal WKK_03790 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family WKK_03805 PF02627 Carboxymuconolactone decarboxylase family WKK_03815 PF03466 LysR substrate binding domain WKK_03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_03820 PF01501 Glycosyl transferase family 8 WKK_03825 PF02080 TrkA-C domain WKK_03825 PF02254 TrkA-N domain WKK_03830 PF00324 Amino acid permease WKK_03835 PF10502 Signal peptidase, peptidase S26 WKK_03840 PF02096 60Kd inner membrane protein WKK_03845 PF00825 Ribonuclease P WKK_03850 PF00468 Ribosomal protein L34 WKK_03855 PF11638 DnaA N-terminal domain WKK_03855 PF08299 Bacterial dnaA protein helix-turn-helix WKK_03855 PF00308 Bacterial dnaA protein WKK_03860 PF00712 DNA polymerase III beta subunit, N-terminal domain WKK_03860 PF02767 DNA polymerase III beta subunit, central domain WKK_03860 PF02768 DNA polymerase III beta subunit, C-terminal domain WKK_03870 PF02463 RecF/RecN/SMC N terminal domain WKK_03875 PF00204 DNA gyrase B WKK_03875 PF00986 DNA gyrase B subunit, carboxyl terminus WKK_03875 PF01751 Toprim domain WKK_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_03880 PF03989 DNA gyrase C-terminal domain, beta-propeller WKK_03880 PF00521 DNA gyrase/topoisomerase IV, subunit A WKK_03885 PF00884 Sulfatase WKK_03890 PF13411 MerR HTH family regulatory protein WKK_03895 PF00368 Hydroxymethylglutaryl-coenzyme A reductase WKK_03905 PF01588 Putative tRNA binding domain WKK_03905 PF09334 tRNA synthetases class I (M) WKK_03905 PF08264 Anticodon-binding domain of tRNA WKK_03910 PF01026 TatD related DNase WKK_03915 PF13331 Domain of unknown function (DUF4093) WKK_03915 PF13662 Toprim domain WKK_03920 PF00398 Ribosomal RNA adenine dimethylase WKK_03925 PF01595 Cyclin M transmembrane N-terminal domain WKK_03925 PF00571 CBS domain WKK_03925 PF03471 Transporter associated domain WKK_03930 PF06257 Biofilm formation stimulator VEG WKK_03935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WKK_03940 PF00303 Thymidylate synthase WKK_03945 PF03816 Cell envelope-related transcriptional attenuator domain WKK_03960 PF02673 Bacitracin resistance protein BacA WKK_03975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WKK_03975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WKK_03980 PF13520 Amino acid permease WKK_03985 PF00696 Amino acid kinase family WKK_04005 PF00535 Glycosyl transferase family 2 WKK_04015 PF00535 Glycosyl transferase family 2 WKK_04020 PF13457 GW (Gly-Tryp) dipeptide domain WKK_04020 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WKK_04025 PF02073 Thermophilic metalloprotease (M29) WKK_04035 PF03853 YjeF-related protein N-terminus WKK_04045 PF00230 Major intrinsic protein WKK_04050 PF04608 Phosphatidylglycerophosphatase A WKK_04055 PF00710 Asparaginase, N-terminal WKK_04055 PF17763 Glutaminase/Asparaginase C-terminal domain WKK_04060 PF02229 Transcriptional Coactivator p15 (PC4) WKK_04065 PF00486 Transcriptional regulatory protein, C terminal WKK_04065 PF00072 Response regulator receiver domain WKK_04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_04070 PF00512 His Kinase A (phospho-acceptor) domain WKK_04080 PF00999 Sodium/hydrogen exchanger family WKK_04085 PF00085 Thioredoxin WKK_04100 PF01195 Peptidyl-tRNA hydrolase WKK_04105 PF00270 DEAD/DEAH box helicase WKK_04105 PF17757 UvrB interaction domain WKK_04105 PF03461 TRCF domain WKK_04105 PF00271 Helicase conserved C-terminal domain WKK_04105 PF02559 CarD-like/TRCF domain WKK_04110 PF01943 Polysaccharide biosynthesis protein WKK_04110 PF14667 Polysaccharide biosynthesis C-terminal domain WKK_04115 PF01479 S4 domain WKK_04125 PF01171 PP-loop family WKK_04135 PF01434 Peptidase family M41 WKK_04135 PF00004 ATPase family associated with various cellular activities (AAA) WKK_04135 PF06480 FtsH Extracellular WKK_04135 PF17862 AAA+ lid domain WKK_04140 PF01156 Inosine-uridine preferring nucleoside hydrolase WKK_04145 PF01156 Inosine-uridine preferring nucleoside hydrolase WKK_04150 PF01773 Na+ dependent nucleoside transporter N-terminus WKK_04150 PF07662 Na+ dependent nucleoside transporter C-terminus WKK_04155 PF00356 Bacterial regulatory proteins, lacI family WKK_04160 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WKK_04165 PF01430 Hsp33 protein WKK_04170 PF01336 OB-fold nucleic acid binding domain WKK_04170 PF00152 tRNA synthetases class II (D, K and N) WKK_04175 PF03577 Peptidase family C69 WKK_04180 PF00324 Amino acid permease WKK_04185 PF01380 SIS domain WKK_04185 PF01418 Helix-turn-helix domain, rpiR family WKK_04190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WKK_04190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain WKK_04205 PF17727 CtsR C-terminal dimerization domain WKK_04205 PF05848 CtsR N-terminal HTH domain WKK_04210 PF17871 AAA lid domain WKK_04210 PF07724 AAA domain (Cdc48 subfamily) WKK_04210 PF00004 ATPase family associated with various cellular activities (AAA) WKK_04210 PF10431 C-terminal, D2-small domain, of ClpB protein WKK_04210 PF02861 Clp amino terminal domain, pathogenicity island component WKK_04215 PF04563 RNA polymerase beta subunit WKK_04215 PF00562 RNA polymerase Rpb2, domain 6 WKK_04215 PF04561 RNA polymerase Rpb2, domain 2 WKK_04215 PF10385 RNA polymerase beta subunit external 1 domain WKK_04215 PF04565 RNA polymerase Rpb2, domain 3 WKK_04215 PF04560 RNA polymerase Rpb2, domain 7 WKK_04220 PF04998 RNA polymerase Rpb1, domain 5 WKK_04220 PF00623 RNA polymerase Rpb1, domain 2 WKK_04220 PF05000 RNA polymerase Rpb1, domain 4 WKK_04220 PF04983 RNA polymerase Rpb1, domain 3 WKK_04220 PF04997 RNA polymerase Rpb1, domain 1 WKK_04225 PF08534 Redoxin WKK_04235 PF01791 DeoC/LacD family aldolase WKK_04240 PF01676 Metalloenzyme superfamily WKK_04245 PF02885 Glycosyl transferase family, helical bundle domain WKK_04245 PF00591 Glycosyl transferase family, a/b domain WKK_04245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WKK_04250 PF01048 Phosphorylase superfamily WKK_04270 PF00156 Phosphoribosyl transferase domain WKK_04275 PF01431 Peptidase family M13 WKK_04275 PF05649 Peptidase family M13 WKK_04280 PF00171 Aldehyde dehydrogenase family WKK_04280 PF00465 Iron-containing alcohol dehydrogenase WKK_04285 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_04290 PF08032 RNA 2'-O ribose methyltransferase substrate binding WKK_04290 PF00588 SpoU rRNA Methylase family WKK_04295 PF00005 ABC transporter WKK_04300 PF00005 ABC transporter WKK_04305 PF02361 Cobalt transport protein WKK_04310 PF01416 tRNA pseudouridine synthase WKK_04315 PF12169 DNA polymerase III subunits gamma and tau domain III WKK_04320 PF02132 RecR protein WKK_04320 PF13662 Toprim domain WKK_04330 PF02223 Thymidylate kinase WKK_04335 PF06153 Cyclic-di-AMP receptor WKK_04340 PF09115 DNA polymerase III, delta subunit, C terminal WKK_04345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WKK_04355 PF16363 GDP-mannose 4,6 dehydratase WKK_04370 PF00248 Aldo/keto reductase family WKK_04375 PF02652 L-lactate permease WKK_04380 PF00534 Glycosyl transferases group 1 WKK_04395 PF00572 Ribosomal protein L13 WKK_04400 PF00380 Ribosomal protein S9/S16 WKK_04415 PF00107 Zinc-binding dehydrogenase WKK_04415 PF08240 Alcohol dehydrogenase GroES-like domain WKK_04420 PF00999 Sodium/hydrogen exchanger family WKK_04425 PF04474 Protein of unknown function (DUF554) WKK_04430 PF03466 LysR substrate binding domain WKK_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_04440 PF00107 Zinc-binding dehydrogenase WKK_04440 PF08240 Alcohol dehydrogenase GroES-like domain WKK_04455 PF13802 Galactose mutarotase-like WKK_04455 PF01055 Glycosyl hydrolases family 31 WKK_04460 PF12833 Helix-turn-helix domain WKK_04460 PF17853 GGDEF-like domain WKK_04465 PF01554 MatE WKK_04470 PF00083 Sugar (and other) transporter WKK_04475 PF00480 ROK family WKK_04490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WKK_04490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WKK_04510 PF00005 ABC transporter WKK_04510 PF17755 UvrA DNA-binding domain WKK_04510 PF17760 UvrA interaction domain WKK_04520 PF13520 Amino acid permease WKK_04530 PF07478 D-ala D-ala ligase C-terminus WKK_04530 PF01820 D-ala D-ala ligase N-terminus WKK_04535 PF01566 Natural resistance-associated macrophage protein WKK_04545 PF03668 P-loop ATPase protein family WKK_04550 PF01933 Uncharacterised protein family UPF0052 WKK_04555 PF14527 WhiA LAGLIDADG-like domain WKK_04555 PF10298 WhiA N-terminal LAGLIDADG-like domain WKK_04555 PF02650 WhiA C-terminal HTH domain WKK_04560 PF00574 Clp protease WKK_04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WKK_04605 PF14602 Hexapeptide repeat of succinyl-transferase WKK_04605 PF12464 Maltose acetyltransferase WKK_04615 PF17871 AAA lid domain WKK_04615 PF10431 C-terminal, D2-small domain, of ClpB protein WKK_04615 PF00004 ATPase family associated with various cellular activities (AAA) WKK_04615 PF07724 AAA domain (Cdc48 subfamily) WKK_04625 PF00692 dUTPase WKK_04630 PF18073 Rubredoxin metal binding domain WKK_04640 PF00749 tRNA synthetases class I (E and Q), catalytic domain WKK_04645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WKK_04645 PF01409 tRNA synthetases class II core domain (F) WKK_04650 PF01588 Putative tRNA binding domain WKK_04650 PF03147 Ferredoxin-fold anticodon binding domain WKK_04650 PF03484 tRNA synthetase B5 domain WKK_04650 PF03483 B3/4 domain WKK_04650 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WKK_04655 PF02618 YceG-like family WKK_04665 PF01272 Transcription elongation factor, GreA/GreB, C-term WKK_04665 PF03449 Transcription elongation factor, N-terminal WKK_04670 PF03717 Penicillin-binding Protein dimerisation domain WKK_04670 PF00905 Penicillin binding protein transpeptidase domain WKK_04675 PF01812 5-formyltetrahydrofolate cyclo-ligase family WKK_04685 PF00480 ROK family WKK_04690 PF00877 NlpC/P60 family WKK_04715 PF13411 MerR HTH family regulatory protein WKK_04720 PF00120 Glutamine synthetase, catalytic domain WKK_04720 PF03951 Glutamine synthetase, beta-Grasp domain WKK_04740 PF00892 EamA-like transporter family WKK_04745 PF06177 QueT transporter WKK_04755 PF00005 ABC transporter WKK_04765 PF00288 GHMP kinases N terminal domain WKK_04765 PF08544 GHMP kinases C terminal WKK_04770 PF01979 Amidohydrolase family WKK_04780 PF01479 S4 domain WKK_04780 PF00163 Ribosomal protein S4/S9 N-terminal domain WKK_04790 PF00860 Permease family WKK_04795 PF00709 Adenylosuccinate synthetase WKK_04810 PF04138 GtrA-like protein WKK_04820 PF01255 Putative undecaprenyl diphosphate synthase WKK_04830 PF03129 Anticodon binding domain WKK_04830 PF04073 Aminoacyl-tRNA editing domain WKK_04830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WKK_04840 PF14480 DNA polymerase III polC-type N-terminus I WKK_04840 PF11490 DNA polymerase III polC-type N-terminus II WKK_04840 PF00929 Exonuclease WKK_04840 PF02811 PHP domain WKK_04840 PF07733 Bacterial DNA polymerase III alpha NTPase domain WKK_04840 PF14579 Helix-hairpin-helix motif WKK_04840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WKK_04845 PF04851 Type III restriction enzyme, res subunit WKK_04845 PF00271 Helicase conserved C-terminal domain WKK_04855 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus WKK_04855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WKK_04860 PF01321 Creatinase/Prolidase N-terminal domain WKK_04860 PF00557 Metallopeptidase family M24 WKK_04870 PF00149 Calcineurin-like phosphoesterase WKK_04870 PF02872 5'-nucleotidase, C-terminal domain WKK_04875 PF06265 Protein of unknown function (DUF1027) WKK_04880 PF13344 Haloacid dehalogenase-like hydrolase WKK_04885 PF12849 PBP superfamily domain WKK_04890 PF00528 Binding-protein-dependent transport system inner membrane component WKK_04895 PF00528 Binding-protein-dependent transport system inner membrane component WKK_04900 PF00005 ABC transporter WKK_04905 PF00005 ABC transporter WKK_04910 PF01895 PhoU domain WKK_04920 PF06160 Septation ring formation regulator, EzrA WKK_04925 PF00579 tRNA synthetases class I (W and Y) WKK_04925 PF01479 S4 domain WKK_04935 PF00773 RNB domain WKK_04935 PF00575 S1 RNA binding domain WKK_04935 PF08206 Ribonuclease B OB domain WKK_04935 PF17876 Cold shock domain WKK_04940 PF01668 SmpB protein WKK_04945 PF00854 POT family WKK_04950 PF13673 Acetyltransferase (GNAT) domain WKK_04965 PF00313 'Cold-shock' DNA-binding domain WKK_04970 PF00689 Cation transporting ATPase, C-terminus WKK_04970 PF00690 Cation transporter/ATPase, N-terminus WKK_04980 PF17674 HHH domain WKK_04980 PF09371 Tex-like protein N-terminal domain WKK_04980 PF16921 Tex protein YqgF-like domain WKK_04980 PF00575 S1 RNA binding domain WKK_04985 PF00689 Cation transporting ATPase, C-terminus WKK_04985 PF00690 Cation transporter/ATPase, N-terminus WKK_05000 PF12072 Domain of unknown function (DUF3552) WKK_05000 PF00013 KH domain WKK_05000 PF01966 HD domain WKK_05005 PF05223 NTF2-like N-terminal transpeptidase domain WKK_05005 PF00905 Penicillin binding protein transpeptidase domain WKK_05005 PF03717 Penicillin-binding Protein dimerisation domain WKK_05015 PF00293 NUDIX domain WKK_05025 PF00893 Small Multidrug Resistance protein WKK_05030 PF01047 MarR family WKK_05035 PF00583 Acetyltransferase (GNAT) family WKK_05045 PF00860 Permease family WKK_05055 PF01594 AI-2E family transporter WKK_05060 PF07969 Amidohydrolase family WKK_05065 PF00072 Response regulator receiver domain WKK_05065 PF00486 Transcriptional regulatory protein, C terminal WKK_05070 PF01263 Aldose 1-epimerase WKK_05075 PF00342 Phosphoglucose isomerase WKK_05085 PF09285 Elongation factor P, C-terminal WKK_05085 PF01132 Elongation factor P (EF-P) OB domain WKK_05085 PF08207 Elongation factor P (EF-P) KOW-like domain WKK_05090 PF03780 Asp23 family, cell envelope-related function WKK_05095 PF01029 NusB family WKK_05100 PF00707 Translation initiation factor IF-3, C-terminal domain WKK_05100 PF05198 Translation initiation factor IF-3, N-terminal domain WKK_05105 PF01632 Ribosomal protein L35 WKK_05110 PF12949 HeH/LEM domain WKK_05110 PF00453 Ribosomal protein L20 WKK_05120 PF00164 Ribosomal protein S12/S23 WKK_05125 PF00177 Ribosomal protein S7p/S5e WKK_05130 PF14492 Elongation Factor G, domain II WKK_05130 PF00679 Elongation factor G C-terminus WKK_05130 PF03144 Elongation factor Tu domain 2 WKK_05130 PF00009 Elongation factor Tu GTP binding domain WKK_05130 PF03764 Elongation factor G, domain IV WKK_05135 PF00005 ABC transporter WKK_05135 PF08402 TOBE domain WKK_05140 PF00528 Binding-protein-dependent transport system inner membrane component WKK_05145 PF00528 Binding-protein-dependent transport system inner membrane component WKK_05150 PF13416 Bacterial extracellular solute-binding protein WKK_05155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WKK_05170 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV WKK_05175 PF07475 HPr Serine kinase C-terminal domain WKK_05175 PF02603 HPr Serine kinase N terminus WKK_05180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WKK_05180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WKK_05185 PF00483 Nucleotidyl transferase WKK_05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_05200 PF00381 PTS HPr component phosphorylation site WKK_05205 PF02896 PEP-utilising enzyme, TIM barrel domain WKK_05205 PF00391 PEP-utilising enzyme, mobile domain WKK_05205 PF05524 PEP-utilising enzyme, N-terminal WKK_05210 PF00121 Triosephosphate isomerase WKK_05215 PF00113 Enolase, C-terminal TIM barrel domain WKK_05215 PF03952 Enolase, N-terminal domain WKK_05220 PF01223 DNA/RNA non-specific endonuclease WKK_05240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WKK_05240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WKK_05245 PF00162 Phosphoglycerate kinase WKK_05260 PF01926 50S ribosome-binding GTPase WKK_05270 PF01467 Cytidylyltransferase-like WKK_05275 PF01966 HD domain WKK_05285 PF01209 ubiE/COQ5 methyltransferase family WKK_05290 PF05636 HIGH Nucleotidyl Transferase WKK_05300 PF01624 MutS domain I WKK_05300 PF05188 MutS domain II WKK_05300 PF05190 MutS family domain IV WKK_05300 PF00488 MutS domain V WKK_05300 PF05192 MutS domain III WKK_05305 PF06971 Putative DNA-binding protein N-terminus WKK_05305 PF02629 CoA binding domain WKK_05310 PF12848 ABC transporter WKK_05310 PF16326 ABC transporter C-terminal domain WKK_05310 PF00005 ABC transporter WKK_05315 PF02631 RecX family WKK_05330 PF00999 Sodium/hydrogen exchanger family WKK_05400 PF14659 Phage integrase, N-terminal SAM-like domain WKK_05400 PF00589 Phage integrase family WKK_05405 PF04167 Protein of unknown function (DUF402) WKK_05415 PF00155 Aminotransferase class I and II WKK_05420 PF12822 ECF transporter, substrate-specific component WKK_05425 PF01741 Large-conductance mechanosensitive channel, MscL WKK_05430 PF01268 Formate--tetrahydrofolate ligase WKK_05435 PF01966 HD domain WKK_05440 PF00166 Chaperonin 10 Kd subunit WKK_05445 PF00118 TCP-1/cpn60 chaperonin family WKK_05455 PF07155 ECF-type riboflavin transporter, S component WKK_05460 PF01119 DNA mismatch repair protein, C-terminal domain WKK_05460 PF08676 MutL C terminal dimerisation domain WKK_05465 PF07308 Protein of unknown function (DUF1456) WKK_05470 PF00258 Flavodoxin WKK_05475 PF02824 TGS domain WKK_05475 PF03129 Anticodon binding domain WKK_05475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WKK_05475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WKK_05485 PF00005 ABC transporter WKK_05495 PF14572 Phosphoribosyl synthetase-associated domain WKK_05495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WKK_05500 PF00248 Aldo/keto reductase family WKK_05510 PF01189 16S rRNA methyltransferase RsmB/F WKK_05510 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF WKK_05510 PF17126 RsmF rRNA methyltransferase first C-terminal domain WKK_05515 PF02686 Glu-tRNAGln amidotransferase C subunit WKK_05520 PF01425 Amidase WKK_05525 PF02934 GatB/GatE catalytic domain WKK_05525 PF02637 GatB domain WKK_05530 PF00781 Diacylglycerol kinase catalytic domain WKK_05535 PF10282 Lactonase, 7-bladed beta-propeller WKK_05540 PF01594 AI-2E family transporter WKK_05545 PF09335 SNARE associated Golgi protein WKK_05550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WKK_05555 PF17674 HHH domain WKK_05555 PF16921 Tex protein YqgF-like domain WKK_05555 PF00575 S1 RNA binding domain WKK_05555 PF09371 Tex-like protein N-terminal domain WKK_05575 PF13457 GW (Gly-Tryp) dipeptide domain WKK_05575 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WKK_05590 PF00313 'Cold-shock' DNA-binding domain WKK_05605 PF01048 Phosphorylase superfamily WKK_05610 PF02576 RimP N-terminal domain WKK_05610 PF17384 RimP C-terminal SH3 domain WKK_05615 PF13184 NusA-like KH domain WKK_05615 PF08529 NusA N-terminal domain WKK_05615 PF00575 S1 RNA binding domain WKK_05620 PF04296 Protein of unknown function (DUF448) WKK_05625 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family WKK_05630 PF00009 Elongation factor Tu GTP binding domain WKK_05630 PF11987 Translation-initiation factor 2 WKK_05630 PF04760 Translation initiation factor IF-2, N-terminal region WKK_05635 PF02033 Ribosome-binding factor A WKK_05640 PF01580 FtsK/SpoIIIE family WKK_05640 PF09397 Ftsk gamma domain WKK_05640 PF17854 FtsK alpha domain WKK_05660 PF00753 Metallo-beta-lactamase superfamily WKK_05660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WKK_05660 PF17770 Ribonuclease J C-terminal domain WKK_05670 PF00009 Elongation factor Tu GTP binding domain WKK_05670 PF03144 Elongation factor Tu domain 2 WKK_05670 PF03143 Elongation factor Tu C-terminal domain WKK_05675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WKK_05675 PF05697 Bacterial trigger factor protein (TF) WKK_05675 PF05698 Bacterial trigger factor protein (TF) C-terminus WKK_05680 PF10431 C-terminal, D2-small domain, of ClpB protein WKK_05680 PF07724 AAA domain (Cdc48 subfamily) WKK_05680 PF06689 ClpX C4-type zinc finger WKK_05685 PF01926 50S ribosome-binding GTPase WKK_05700 PF00488 MutS domain V WKK_05700 PF01713 Smr domain WKK_05705 PF00248 Aldo/keto reductase family WKK_05710 PF04127 DNA / pantothenate metabolism flavoprotein WKK_05710 PF02441 Flavoprotein WKK_05715 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal WKK_05715 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal WKK_05725 PF01520 N-acetylmuramoyl-L-alanine amidase WKK_05725 PF08239 Bacterial SH3 domain WKK_05730 PF13393 Histidyl-tRNA synthetase WKK_05730 PF03129 Anticodon binding domain WKK_05735 PF01336 OB-fold nucleic acid binding domain WKK_05735 PF00152 tRNA synthetases class II (D, K and N) WKK_05735 PF02938 GAD domain WKK_05740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) WKK_05740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 WKK_05745 PF01165 Ribosomal protein S21 WKK_05750 PF09424 Yqey-like protein WKK_05755 PF02130 Uncharacterized protein family UPF0054 WKK_05760 PF01219 Prokaryotic diacylglycerol kinase WKK_05765 PF07650 KH domain WKK_05765 PF01926 50S ribosome-binding GTPase WKK_05770 PF11967 Recombination protein O N terminal WKK_05770 PF02565 Recombination protein O C terminal WKK_05775 PF00588 SpoU rRNA Methylase family WKK_05780 PF16198 tRNA pseudouridylate synthase B C-terminal domain WKK_05780 PF01509 TruB family pseudouridylate synthase (N terminal domain) WKK_05785 PF06574 FAD synthetase WKK_05785 PF01687 Riboflavin kinase WKK_05795 PF00005 ABC transporter WKK_05795 PF01476 LysM domain WKK_05800 PF01061 ABC-2 type transporter WKK_05810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WKK_05810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WKK_05815 PF02447 GntP family permease WKK_05820 PF13091 PLD-like domain WKK_05820 PF13396 Phospholipase_D-nuclease N-terminal WKK_05825 PF05193 Peptidase M16 inactive domain WKK_05830 PF05193 Peptidase M16 inactive domain WKK_05830 PF00675 Insulinase (Peptidase family M16) WKK_05835 PF13464 Domain of unknown function (DUF4115) WKK_05840 PF01066 CDP-alcohol phosphatidyltransferase WKK_05845 PF00994 Probable molybdopterin binding domain WKK_05845 PF02464 Competence-damaged protein WKK_05845 PF18146 Damage-inducible protein CinA KH domain WKK_05850 PF00154 recA bacterial DNA recombination protein WKK_05865 PF00557 Metallopeptidase family M24 WKK_05870 PF10702 Protein of unknown function (DUF2507) WKK_05880 PF02660 Glycerol-3-phosphate acyltransferase WKK_05885 PF00753 Metallo-beta-lactamase superfamily WKK_05890 PF10141 Single-strand DNA-specific exonuclease, C terminal domain WKK_05890 PF02272 DHHA1 domain WKK_05890 PF01368 DHH family WKK_05890 PF17768 RecJ OB domain WKK_05895 PF00156 Phosphoribosyl transferase domain WKK_05900 PF05979 Bacterial protein of unknown function (DUF896) WKK_05905 PF03672 Uncharacterised protein family (UPF0154) WKK_05910 PF01553 Acyltransferase WKK_05915 PF05175 Methyltransferase small domain WKK_05920 PF01541 GIY-YIG catalytic domain WKK_05925 PF00318 Ribosomal protein S2 WKK_05930 PF00889 Elongation factor TS WKK_05935 PF00696 Amino acid kinase family WKK_05940 PF01765 Ribosome recycling factor WKK_05945 PF01380 SIS domain WKK_05950 PF01712 Deoxynucleoside kinase WKK_05955 PF13419 Haloacid dehalogenase-like hydrolase WKK_05960 PF01177 Asp/Glu/Hydantoin racemase WKK_05965 PF01725 Ham1 family WKK_05980 PF00206 Lyase WKK_05980 PF10397 Adenylosuccinate lyase C-terminus WKK_05995 PF14490 Helix-hairpin-helix containing domain WKK_05995 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain WKK_05995 PF13538 UvrD-like helicase C-terminal domain WKK_06005 PF13735 tRNA nucleotidyltransferase domain 2 putative WKK_06005 PF12627 Probable RNA and SrmB- binding site of polymerase A WKK_06005 PF01743 Poly A polymerase head domain WKK_06010 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) WKK_06010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 WKK_06030 PF05389 Negative regulator of genetic competence (MecA) WKK_06040 PF08439 Oligopeptidase F WKK_06040 PF01432 Peptidase family M3 WKK_06045 PF02091 Glycyl-tRNA synthetase alpha subunit WKK_06050 PF02092 Glycyl-tRNA synthetase beta subunit WKK_06060 PF03358 NADPH-dependent FMN reductase WKK_06065 PF07690 Major Facilitator Superfamily WKK_06075 PF00528 Binding-protein-dependent transport system inner membrane component WKK_06080 PF00005 ABC transporter WKK_06085 PF00497 Bacterial extracellular solute-binding proteins, family 3 WKK_06090 PF07690 Major Facilitator Superfamily WKK_06095 PF00905 Penicillin binding protein transpeptidase domain WKK_06095 PF00912 Transglycosylase WKK_06100 PF03838 Recombination protein U WKK_06105 PF06908 YspA SLOG family WKK_06110 PF05103 DivIVA protein WKK_06115 PF01170 Putative RNA methylase family UPF0020 WKK_06115 PF02926 THUMP domain WKK_06120 PF00580 UvrD/REP helicase N-terminal domain WKK_06120 PF13361 UvrD-like helicase C-terminal domain WKK_06125 PF03120 NAD-dependent DNA ligase OB-fold domain WKK_06125 PF01653 NAD-dependent DNA ligase adenylation domain WKK_06125 PF00533 BRCA1 C Terminus (BRCT) domain WKK_06125 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WKK_06125 PF12826 Helix-hairpin-helix motif WKK_06145 PF00664 ABC transporter transmembrane region WKK_06145 PF00005 ABC transporter WKK_06150 PF04851 Type III restriction enzyme, res subunit WKK_06150 PF02151 UvrB/uvrC motif WKK_06150 PF12344 Ultra-violet resistance protein B WKK_06150 PF17757 UvrB interaction domain WKK_06150 PF00271 Helicase conserved C-terminal domain WKK_06160 PF00849 RNA pseudouridylate synthase WKK_06160 PF01479 S4 domain WKK_06165 PF00156 Phosphoribosyl transferase domain WKK_06170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WKK_06170 PF00117 Glutamine amidotransferase class-I WKK_06175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WKK_06175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WKK_06175 PF02142 MGS-like domain WKK_06195 PF03780 Asp23 family, cell envelope-related function WKK_06200 PF00440 Bacterial regulatory proteins, tetR family WKK_06205 PF01070 FMN-dependent dehydrogenase WKK_06210 PF00288 GHMP kinases N terminal domain WKK_06210 PF08544 GHMP kinases C terminal WKK_06220 PF00288 GHMP kinases N terminal domain WKK_06220 PF08544 GHMP kinases C terminal WKK_06220 PF10509 Galactokinase galactose-binding signature WKK_06225 PF13307 Helicase C-terminal domain WKK_06225 PF04851 Type III restriction enzyme, res subunit WKK_06225 PF00929 Exonuclease WKK_06235 PF01336 OB-fold nucleic acid binding domain WKK_06235 PF00152 tRNA synthetases class II (D, K and N) WKK_06240 PF00005 ABC transporter WKK_06240 PF16326 ABC transporter C-terminal domain WKK_06240 PF12848 ABC transporter WKK_06245 PF00186 Dihydrofolate reductase WKK_06255 PF01336 OB-fold nucleic acid binding domain WKK_06255 PF07733 Bacterial DNA polymerase III alpha NTPase domain WKK_06255 PF02811 PHP domain WKK_06255 PF14579 Helix-hairpin-helix motif WKK_06255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WKK_06260 PF13291 ACT domain WKK_06260 PF04607 Region found in RelA / SpoT proteins WKK_06260 PF02824 TGS domain WKK_06270 PF13509 S1 domain WKK_06270 PF17783 CvfB-like winged helix domain WKK_06280 PF00849 RNA pseudouridylate synthase WKK_06280 PF01479 S4 domain WKK_06290 PF00271 Helicase conserved C-terminal domain WKK_06290 PF00270 DEAD/DEAH box helicase WKK_06300 PF02224 Cytidylate kinase WKK_06305 PF00575 S1 RNA binding domain WKK_06310 PF01926 50S ribosome-binding GTPase WKK_06310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WKK_06315 PF00216 Bacterial DNA-binding protein WKK_06320 PF06800 Sugar transport protein WKK_06330 PF03099 Biotin/lipoate A/B protein ligase family WKK_06330 PF10437 Bacterial lipoate protein ligase C-terminus WKK_06335 PF00676 Dehydrogenase E1 component WKK_06340 PF02780 Transketolase, C-terminal domain WKK_06340 PF02779 Transketolase, pyrimidine binding domain WKK_06345 PF00364 Biotin-requiring enzyme WKK_06345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WKK_06345 PF02817 e3 binding domain WKK_06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_06350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WKK_06360 PF03816 Cell envelope-related transcriptional attenuator domain WKK_06365 PF02706 Chain length determinant protein WKK_06370 PF13614 AAA domain WKK_06375 PF02397 Bacterial sugar transferase WKK_06390 PF03466 LysR substrate binding domain WKK_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_06395 PF03601 Conserved hypothetical protein 698 WKK_06400 PF17156 Gammaproteobacterial periplasmic sensor domain WKK_06400 PF00990 Diguanylate cyclase, GGDEF domain WKK_06405 PF00877 NlpC/P60 family WKK_06410 PF01906 Putative heavy-metal-binding WKK_06420 PF01807 CHC2 zinc finger WKK_06420 PF08275 DNA primase catalytic core, N-terminal domain WKK_06420 PF10410 DnaB-helicase binding domain of primase WKK_06425 PF03979 Sigma-70 factor, region 1.1 WKK_06425 PF00140 Sigma-70 factor, region 1.2 WKK_06425 PF04539 Sigma-70 region 3 WKK_06425 PF04545 Sigma-70, region 4 WKK_06425 PF04542 Sigma-70 region 2 WKK_06430 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding WKK_06430 PF01628 HrcA protein C terminal domain WKK_06435 PF01025 GrpE WKK_06440 PF00012 Hsp70 protein WKK_06445 PF01556 DnaJ C terminal domain WKK_06445 PF00684 DnaJ central domain WKK_06445 PF00226 DnaJ domain WKK_06460 PF02397 Bacterial sugar transferase WKK_06465 PF07690 Major Facilitator Superfamily WKK_06470 PF00072 Response regulator receiver domain WKK_06470 PF00486 Transcriptional regulatory protein, C terminal WKK_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WKK_06475 PF00512 His Kinase A (phospho-acceptor) domain WKK_06475 PF00989 PAS fold WKK_06475 PF16736 Single Cache-like WKK_06480 PF00485 Phosphoribulokinase / Uridine kinase family WKK_06485 PF05343 M42 glutamyl aminopeptidase WKK_06490 PF01588 Putative tRNA binding domain WKK_06490 PF03483 B3/4 domain WKK_06490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WKK_06490 PF03484 tRNA synthetase B5 domain WKK_06490 PF03147 Ferredoxin-fold anticodon binding domain WKK_06500 PF08245 Mur ligase middle domain WKK_06500 PF02875 Mur ligase family, glutamate ligase domain WKK_06500 PF01225 Mur ligase family, catalytic domain WKK_06505 PF01027 Inhibitor of apoptosis-promoting Bax1 WKK_06520 PF00108 Thiolase, N-terminal domain WKK_06520 PF02803 Thiolase, C-terminal domain WKK_06535 PF00990 Diguanylate cyclase, GGDEF domain WKK_06535 PF05230 MASE2 domain WKK_06540 PF02350 UDP-N-acetylglucosamine 2-epimerase WKK_06575 PF03466 LysR substrate binding domain WKK_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WKK_06580 PF00390 Malic enzyme, N-terminal domain WKK_06580 PF03949 Malic enzyme, NAD binding domain WKK_06585 PF03390 2-hydroxycarboxylate transporter family WKK_06595 PF00230 Major intrinsic protein WKK_06600 PF00534 Glycosyl transferases group 1 WKK_06615 PF01043 SecA preprotein cross-linking domain WKK_06615 PF07517 SecA DEAD-like domain WKK_06615 PF07516 SecA Wing and Scaffold domain WKK_06630 PF16929 Accessory Sec system GspB-transporter WKK_06640 PF00344 SecY translocase WKK_06655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WKK_06660 PF00403 Heavy-metal-associated domain WKK_06852 PF00239 Resolvase, N terminal domain WKK_06852 PF02796 Helix-turn-helix domain of resolvase WKK_06862 PF01051 Initiator Replication protein WKK_06867 PF08279 HTH domain WKK_06867 PF04394 Protein of unknown function, DUF536 WKK_06877 PF03965 Penicillinase repressor WKK_06897 PF01022 Bacterial regulatory protein, arsR family WKK_06907 PF00085 Thioredoxin WKK_06912 PF00085 Thioredoxin WKK_06917 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_06932 PF07992 Pyridine nucleotide-disulphide oxidoreductase WKK_06932 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WKK_06952 PF12697 Alpha/beta hydrolase family WKK_06957 PF00107 Zinc-binding dehydrogenase WKK_06957 PF08240 Alcohol dehydrogenase GroES-like domain