C4597_00070 SM00100 Cyclic nucleotide-monophosphate binding domain C4597_00145 SM00957 SecA DEAD-like domain C4597_00145 SM00958 SecA preprotein cross-linking domain C4597_00205 SM00957 SecA DEAD-like domain C4597_00205 SM00958 SecA preprotein cross-linking domain C4597_00265 SM00838 Elongation factor G C-terminus C4597_00285 SM00382 ATPases associated with a variety of cellular activities C4597_00330 SM00562 C4597_00330 C4597_00340 SM00028 Tetratricopeptide repeats C4597_00360 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C4597_00360 SM00474 3'-5' exonuclease C4597_00360 SM00475 5'-3' exonuclease C4597_00360 SM00482 DNA polymerase A domain C4597_00370 SM00382 ATPases associated with a variety of cellular activities C4597_00380 SM00829 Enoylreductase C4597_00385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C4597_00385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C4597_00385 SM00493 C4597_00385 C4597_00390 SM01240 C4597_00390 C4597_00410 SM00062 Bacterial periplasmic substrate-binding proteins C4597_00420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4597_00445 SM00838 Elongation factor G C-terminus C4597_00480 SM00849 Metallo-beta-lactamase superfamily C4597_00485 SM00046 Diacylglycerol kinase catalytic domain (presumed) C4597_00490 SM01131 C4597_00490 C4597_00495 SM00434 DNA Topoisomerase IV C4597_00500 SM00387 Histidine kinase-like ATPases C4597_00500 SM00433 TopoisomeraseII C4597_00515 SM00465 GIY-YIG type nucleases (URI domain) C4597_00520 SM00855 Phosphoglycerate mutase family C4597_00540 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_00555 SM00382 ATPases associated with a variety of cellular activities C4597_00555 SM00962 SRP54-type protein, GTPase domain C4597_00555 SM00963 SRP54-type protein, helical bundle domain C4597_00565 SM00382 ATPases associated with a variety of cellular activities C4597_00565 SM00962 SRP54-type protein, GTPase domain C4597_00565 SM00963 SRP54-type protein, helical bundle domain C4597_00570 SM00358 Double-stranded RNA binding motif C4597_00570 SM00535 Ribonuclease III family C4597_00585 SM00487 DEAD-like helicases superfamily C4597_00585 SM00490 helicase superfamily c-terminal domain C4597_00595 SM00836 DALR anticodon binding domain C4597_00595 SM01016 Arginyl tRNA synthetase N terminal dom C4597_00630 SM01120 C4597_00630 C4597_00630 SM01121 C4597_00630 C4597_00645 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain C4597_00660 SM00220 Serine/Threonine protein kinases, catalytic domain C4597_00660 SM00740 C4597_00660 C4597_00665 SM00331 Sigma factor PP2C-like phosphatases C4597_00665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C4597_00680 SM00487 DEAD-like helicases superfamily C4597_00680 SM00490 helicase superfamily c-terminal domain C4597_00740 SM00487 DEAD-like helicases superfamily C4597_00740 SM00490 helicase superfamily c-terminal domain C4597_00755 SM01323 C4597_00755 C4597_00770 SM00382 ATPases associated with a variety of cellular activities C4597_00775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4597_00825 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_00835 SM00387 Histidine kinase-like ATPases C4597_00835 SM00388 His Kinase A (phosphoacceptor) domain C4597_00840 SM00448 cheY-homologous receiver domain C4597_00840 SM00862 Transcriptional regulatory protein, C terminal C4597_00870 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C4597_00870 SM01232 C4597_00870 C4597_00880 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C4597_00880 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C4597_00880 SM00493 C4597_00880 C4597_01005 SM00226 Low molecular weight phosphatase family C4597_01070 SM00530 Helix-turn-helix XRE-family like proteins C4597_01135 SM00641 Glycosyl hydrolases family 25 C4597_01180 SM00635 Bacterial Ig-like domain 2 C4597_01340 SM01040 BRO family, N-terminal domain C4597_01350 SM00530 Helix-turn-helix XRE-family like proteins C4597_01420 SM00354 helix_turn _helix lactose operon repressor C4597_01450 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_01465 SM00363 S4 RNA-binding domain C4597_01480 SM00864 Tubulin/FtsZ family, GTPase domain C4597_01480 SM00865 Tubulin/FtsZ family, C-terminal domain C4597_01485 SM00842 Cell division protein FtsA C4597_01510 SM00740 C4597_01510 C4597_01615 SM00342 helix_turn_helix, arabinose operon control protein C4597_01665 SM00838 Elongation factor G C-terminus C4597_01680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_01715 SM00382 ATPases associated with a variety of cellular activities C4597_01725 SM01387 C4597_01725 C4597_01735 SM00849 Metallo-beta-lactamase superfamily C4597_01740 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4597_01770 SM00732 Likely ribonuclease with RNase H fold. C4597_01780 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C4597_01790 SM00116 Domain in cystathionine beta-synthase and other proteins. C4597_01790 SM00924 MgtE intracellular N domain C4597_01805 SM00954 Region found in RelA / SpoT proteins C4597_01825 SM01409 C4597_01825 C4597_01830 SM00072 Guanylate kinase homologues. C4597_01845 SM00363 S4 RNA-binding domain C4597_01870 SM00487 DEAD-like helicases superfamily C4597_01870 SM00490 helicase superfamily c-terminal domain C4597_01910 SM00116 Domain in cystathionine beta-synthase and other proteins. C4597_01910 SM00382 ATPases associated with a variety of cellular activities C4597_01935 SM00382 ATPases associated with a variety of cellular activities C4597_01950 SM00226 Low molecular weight phosphatase family C4597_01975 SM01007 Class II Aldolase and Adducin N-terminal domain C4597_01995 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4597_02000 SM00052 Putative diguanylate phosphodiesterase C4597_02000 SM00267 diguanylate cyclase C4597_02025 SM00382 ATPases associated with a variety of cellular activities C4597_02055 SM00257 Lysin motif C4597_02075 SM00257 Lysin motif C4597_02265 SM00479 C4597_02265 C4597_02285 SM00986 Uracil DNA glycosylase superfamily C4597_02285 SM00987 UreE urease accessory protein, C-terminal domain C4597_02315 SM00382 ATPases associated with a variety of cellular activities C4597_02365 SM00382 ATPases associated with a variety of cellular activities C4597_02385 SM00422 helix_turn_helix, mercury resistance C4597_02410 SM00382 ATPases associated with a variety of cellular activities C4597_02450 SM00267 diguanylate cyclase C4597_02465 SM00062 Bacterial periplasmic substrate-binding proteins C4597_02465 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C4597_02470 SM00382 ATPases associated with a variety of cellular activities C4597_02475 SM00072 Guanylate kinase homologues. C4597_02485 SM00382 ATPases associated with a variety of cellular activities C4597_02490 SM00382 ATPases associated with a variety of cellular activities C4597_02495 SM00382 ATPases associated with a variety of cellular activities C4597_02505 SM00855 Phosphoglycerate mutase family C4597_02595 SM01038 Beta galactosidase small chain C4597_02605 SM00855 Phosphoglycerate mutase family C4597_02640 SM00967 RNA 2'-O ribose methyltransferase substrate binding C4597_02650 SM00937 C4597_02650 C4597_02655 SM00957 SecA DEAD-like domain C4597_02655 SM00958 SecA preprotein cross-linking domain C4597_02680 SM01005 Alanine racemase, C-terminal domain C4597_02685 SM00487 DEAD-like helicases superfamily C4597_02685 SM00490 helicase superfamily c-terminal domain C4597_02760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_02770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4597_02775 SM00849 Metallo-beta-lactamase superfamily C4597_02790 SM00091 PAS domain C4597_02790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4597_02790 SM00387 Histidine kinase-like ATPases C4597_02790 SM00388 His Kinase A (phosphoacceptor) domain C4597_02795 SM00448 cheY-homologous receiver domain C4597_02795 SM00862 Transcriptional regulatory protein, C terminal C4597_02815 SM01400 C4597_02815 C4597_02895 SM00829 Enoylreductase C4597_02905 SM00662 RNA polymerases D C4597_02925 SM00316 Ribosomal protein S1-like RNA-binding domain C4597_02975 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C4597_02980 SM01374 C4597_02980 C4597_03000 SM00322 K homology RNA-binding domain C4597_03015 SM01382 C4597_03015 C4597_03015 SM01383 C4597_03015 C4597_03035 SM01403 C4597_03035 C4597_03105 SM00857 Resolvase, N terminal domain C4597_03180 SM00382 ATPases associated with a variety of cellular activities C4597_03235 SM00937 C4597_03235 C4597_03270 SM00530 Helix-turn-helix XRE-family like proteins C4597_03285 SM01350 C4597_03285 C4597_03315 SM00014 Acid phosphatase homologues C4597_03350 SM00850 LytTr DNA-binding domain C4597_03365 SM00382 ATPases associated with a variety of cellular activities C4597_03380 SM00448 cheY-homologous receiver domain C4597_03385 SM00387 Histidine kinase-like ATPases C4597_03440 SM00382 ATPases associated with a variety of cellular activities C4597_03450 SM00344 helix_turn_helix ASNC type C4597_03455 SM00829 Enoylreductase C4597_03475 SM00649 Ribosomal protein L11/L12 C4597_03480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C4597_03480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C4597_03500 SM00967 RNA 2'-O ribose methyltransferase substrate binding C4597_03505 SM00535 Ribonuclease III family C4597_03510 SM00840 C4597_03510 C4597_03535 SM00382 ATPases associated with a variety of cellular activities C4597_03580 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4597_03580 SM00866 C4597_03580 C4597_03610 SM00382 ATPases associated with a variety of cellular activities C4597_03620 SM00382 ATPases associated with a variety of cellular activities C4597_03630 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_03650 SM00422 helix_turn_helix, mercury resistance C4597_03675 SM00387 Histidine kinase-like ATPases C4597_03675 SM00388 His Kinase A (phosphoacceptor) domain C4597_03680 SM00448 cheY-homologous receiver domain C4597_03680 SM00862 Transcriptional regulatory protein, C terminal C4597_03700 SM00470 ParB-like nuclease domain C4597_03760 SM00422 helix_turn_helix, mercury resistance C4597_03805 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_03895 SM00857 Resolvase, N terminal domain C4597_03900 SM00857 Resolvase, N terminal domain C4597_03930 SM00530 Helix-turn-helix XRE-family like proteins C4597_03965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4597_03965 SM00450 Rhodanese Homology Domain C4597_03970 SM00419 helix_turn_helix, cAMP Regulatory protein C4597_04025 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_04030 SM00829 Enoylreductase C4597_04045 SM00422 helix_turn_helix, mercury resistance C4597_04065 SM00829 Enoylreductase C4597_04075 SM00382 ATPases associated with a variety of cellular activities C4597_04080 SM00422 helix_turn_helix, mercury resistance C4597_04145 SM00248 ankyrin repeats C4597_04210 SM00382 ATPases associated with a variety of cellular activities C4597_04210 SM00760 Bacterial dnaA protein helix-turn-helix domain C4597_04215 SM00480 DNA polymerase III beta subunit C4597_04230 SM00387 Histidine kinase-like ATPases C4597_04230 SM00433 TopoisomeraseII C4597_04235 SM00434 DNA Topoisomerase IV C4597_04245 SM00422 helix_turn_helix, mercury resistance C4597_04290 SM00493 C4597_04290 C4597_04295 SM00650 Ribosomal RNA adenine dimethylases C4597_04300 SM00116 Domain in cystathionine beta-synthase and other proteins. C4597_04435 SM00870 C4597_04435 C4597_04445 SM00448 cheY-homologous receiver domain C4597_04445 SM00862 Transcriptional regulatory protein, C terminal C4597_04450 SM00387 Histidine kinase-like ATPases C4597_04450 SM00388 His Kinase A (phosphoacceptor) domain C4597_04475 SM00116 Domain in cystathionine beta-synthase and other proteins. C4597_04485 SM00487 DEAD-like helicases superfamily C4597_04485 SM00490 helicase superfamily c-terminal domain C4597_04485 SM00982 C4597_04485 C4597_04485 SM01058 CarD-like/TRCF domain C4597_04495 SM00363 S4 RNA-binding domain C4597_04515 SM00382 ATPases associated with a variety of cellular activities C4597_04535 SM00354 helix_turn _helix lactose operon repressor C4597_04600 SM01350 C4597_04600 C4597_04635 SM00382 ATPases associated with a variety of cellular activities C4597_04635 SM01086 C-terminal, D2-small domain, of ClpB protein C4597_04645 SM00663 RNA polymerase I subunit A N-terminus C4597_04660 SM01133 C4597_04660 C4597_04670 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C4597_04690 SM00829 Enoylreductase C4597_04720 SM00382 ATPases associated with a variety of cellular activities C4597_04725 SM00382 ATPases associated with a variety of cellular activities C4597_04745 SM00382 ATPases associated with a variety of cellular activities C4597_04750 SM00493 C4597_04750 C4597_04875 SM00829 Enoylreductase C4597_04900 SM00829 Enoylreductase C4597_04925 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4597_04925 SM00895 C4597_04925 C4597_04940 SM01350 C4597_04940 C4597_04975 SM00342 helix_turn_helix, arabinose operon control protein C4597_05100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4597_05125 SM00382 ATPases associated with a variety of cellular activities C4597_05125 SM01086 C-terminal, D2-small domain, of ClpB protein C4597_05140 SM00382 ATPases associated with a variety of cellular activities C4597_05145 SM00670 Large family of predicted nucleotide-binding domains C4597_05160 SM00873 B3/4 domain C4597_05160 SM00874 tRNA synthetase B5 domain C4597_05160 SM00896 Ferredoxin-fold anticodon binding domain C4597_05200 SM00257 Lysin motif C4597_05210 SM00450 Rhodanese Homology Domain C4597_05225 SM00422 helix_turn_helix, mercury resistance C4597_05230 SM01230 C4597_05230 C4597_05270 SM00382 ATPases associated with a variety of cellular activities C4597_05290 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4597_05290 SM00866 C4597_05290 C4597_05295 SM00363 S4 RNA-binding domain C4597_05295 SM01390 C4597_05295 C4597_05310 SM00788 Adenylosuccinate synthetase C4597_05355 SM00479 C4597_05355 C4597_05355 SM00481 DNA polymerase alpha chain like domain C4597_05385 SM00487 DEAD-like helicases superfamily C4597_05385 SM00490 helicase superfamily c-terminal domain C4597_05440 SM00382 ATPases associated with a variety of cellular activities C4597_05445 SM00382 ATPases associated with a variety of cellular activities C4597_05475 SM00316 Ribosomal protein S1-like RNA-binding domain C4597_05475 SM00955 C4597_05475 C4597_05500 SM00357 Cold shock protein domain C4597_05505 SM00831 Cation transporter/ATPase, N-terminus C4597_05515 SM00316 Ribosomal protein S1-like RNA-binding domain C4597_05515 SM00732 Likely ribonuclease with RNase H fold. C4597_05545 SM00322 K homology RNA-binding domain C4597_05545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_05580 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_05590 SM00873 B3/4 domain C4597_05615 SM00862 Transcriptional regulatory protein, C terminal C4597_05635 SM00841 Elongation factor P, C-terminal C4597_05635 SM01185 C4597_05635 C4597_05680 SM00838 Elongation factor G C-terminus C4597_05680 SM00889 Elongation factor G, domain IV C4597_05685 SM00382 ATPases associated with a variety of cellular activities C4597_05765 SM01192 C4597_05765 C4597_05765 SM01193 C4597_05765 C4597_05770 SM00892 DNA/RNA non-specific endonuclease C4597_05780 SM00530 Helix-turn-helix XRE-family like proteins C4597_05795 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4597_05805 SM00257 Lysin motif C4597_05820 SM01103 C4597_05820 C4597_05830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_05855 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C4597_05855 SM00534 ATPase domain of DNA mismatch repair MUTS family C4597_05860 SM00881 CoA binding domain C4597_05865 SM00382 ATPases associated with a variety of cellular activities C4597_05925 SM00530 Helix-turn-helix XRE-family like proteins C4597_05975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_05980 SM00883 Chaperonin 10 Kd subunit C4597_06000 SM00853 MutL C terminal dimerisation domain C4597_06000 SM01340 C4597_06000 C4597_06015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C4597_06025 SM00382 ATPases associated with a variety of cellular activities C4597_06035 SM01400 C4597_06035 C4597_06065 SM00845 GatB domain C4597_06070 SM00046 Diacylglycerol kinase catalytic domain (presumed) C4597_06100 SM00316 Ribosomal protein S1-like RNA-binding domain C4597_06205 SM00530 Helix-turn-helix XRE-family like proteins C4597_06210 SM00047 Lysozyme subfamily 2 C4597_06225 SM00357 Cold shock protein domain C4597_06275 SM00382 ATPases associated with a variety of cellular activities C4597_06275 SM00843 C4597_06275 C4597_06295 SM00849 Metallo-beta-lactamase superfamily C4597_06315 SM00382 ATPases associated with a variety of cellular activities C4597_06315 SM00994 ClpX C4-type zinc finger C4597_06315 SM01086 C-terminal, D2-small domain, of ClpB protein C4597_06335 SM00463 Small MutS-related domain C4597_06335 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C4597_06335 SM00534 ATPase domain of DNA mismatch repair MUTS family C4597_06365 SM00287 Bacterial SH3 domain homologues C4597_06365 SM00646 C4597_06365 C4597_06425 SM00904 Riboflavin kinase C4597_06435 SM00382 ATPases associated with a variety of cellular activities C4597_06460 SM00155 Phospholipase D. Active site motifs. C4597_06490 SM00382 ATPases associated with a variety of cellular activities C4597_06520 SM01207 C4597_06520 C4597_06550 SM00563 Phosphate acyltransferases C4597_06620 SM00998 Adenylosuccinate lyase C-terminus C4597_06625 SM00855 Phosphoglycerate mutase family C4597_06630 SM00028 Tetratricopeptide repeats C4597_06685 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_06710 SM00382 ATPases associated with a variety of cellular activities C4597_06715 SM00062 Bacterial periplasmic substrate-binding proteins C4597_06750 SM00981 C4597_06750 C4597_06760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4597_06760 SM00292 breast cancer carboxy-terminal domain C4597_06760 SM00532 Ligase N family C4597_06770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_06775 SM00347 helix_turn_helix multiple antibiotic resistance protein C4597_06780 SM00382 ATPases associated with a variety of cellular activities C4597_06785 SM00487 DEAD-like helicases superfamily C4597_06785 SM00490 helicase superfamily c-terminal domain C4597_06795 SM00363 S4 RNA-binding domain C4597_06805 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C4597_06810 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4597_06860 SM00479 C4597_06860 C4597_06860 SM00487 DEAD-like helicases superfamily C4597_06860 SM00491 C4597_06860 C4597_06875 SM00382 ATPases associated with a variety of cellular activities C4597_06890 SM00481 DNA polymerase alpha chain like domain C4597_06895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4597_06895 SM00954 Region found in RelA / SpoT proteins C4597_06915 SM00363 S4 RNA-binding domain C4597_06925 SM00487 DEAD-like helicases superfamily C4597_06925 SM00490 helicase superfamily c-terminal domain C4597_06940 SM00316 Ribosomal protein S1-like RNA-binding domain C4597_06950 SM00411 bacterial (prokaryotic) histone like domain C4597_06975 SM00861 Transketolase, pyrimidine binding domain C4597_07035 SM00267 diguanylate cyclase C4597_07055 SM00400 zinc finger C4597_07055 SM00493 C4597_07055 C4597_07080 SM00271 DnaJ molecular chaperone homology domain C4597_07110 SM00448 cheY-homologous receiver domain C4597_07110 SM00862 Transcriptional regulatory protein, C terminal C4597_07115 SM00091 PAS domain C4597_07115 SM00387 Histidine kinase-like ATPases C4597_07115 SM00388 His Kinase A (phosphoacceptor) domain C4597_07170 SM00052 Putative diguanylate phosphodiesterase C4597_07175 SM00267 diguanylate cyclase C4597_07185 SM00919 Malic enzyme, NAD binding domain C4597_07185 SM01274 C4597_07185 C4597_07235 SM00957 SecA DEAD-like domain C4597_07235 SM00958 SecA preprotein cross-linking domain C4597_07315 SM00100 Cyclic nucleotide-monophosphate binding domain C4597_07315 SM00419 helix_turn_helix, cAMP Regulatory protein C4597_07355 SM00100 Cyclic nucleotide-monophosphate binding domain C4597_07355 SM00419 helix_turn_helix, cAMP Regulatory protein C4597_07465 SM00530 Helix-turn-helix XRE-family like proteins C4597_07525 SM00530 Helix-turn-helix XRE-family like proteins C4597_07555 SM00530 Helix-turn-helix XRE-family like proteins