WSWS_00006	SM00478	endonuclease III
WSWS_00009	SM00470	ParB-like nuclease domain
WSWS_00013	SM00448	cheY-homologous receiver domain
WSWS_00013	SM00862	Transcriptional regulatory protein, C terminal
WSWS_00014	SM00387	Histidine kinase-like ATPases
WSWS_00014	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_00028	SM00731	SprT homologues.
WSWS_00030	SM00382	ATPases associated with a variety of cellular activities
WSWS_00038	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_00038	SM00866	WSWS_00038
WSWS_00044	SM00382	ATPases associated with a variety of cellular activities
WSWS_00051	SM00937	WSWS_00051
WSWS_00064	SM00382	ATPases associated with a variety of cellular activities
WSWS_00071	SM00382	ATPases associated with a variety of cellular activities
WSWS_00071	SM01086	C-terminal, D2-small domain, of ClpB protein
WSWS_00073	SM00663	RNA polymerase I subunit A N-terminus
WSWS_00082	SM00014	Acid phosphatase homologues
WSWS_00096	SM01403	WSWS_00096
WSWS_00100	SM01382	WSWS_00100
WSWS_00100	SM01383	WSWS_00100
WSWS_00103	SM00322	K homology RNA-binding domain
WSWS_00107	SM01374	WSWS_00107
WSWS_00108	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
WSWS_00118	SM00316	Ribosomal protein S1-like RNA-binding domain
WSWS_00122	SM00662	RNA polymerases D
WSWS_00130	SM00382	ATPases associated with a variety of cellular activities
WSWS_00130	SM00930	WSWS_00130
WSWS_00135	SM00840	WSWS_00135
WSWS_00137	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WSWS_00141	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
WSWS_00142	SM00649	Ribosomal protein L11/L12
WSWS_00157	SM01005	Alanine racemase, C-terminal domain
WSWS_00169	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WSWS_00182	SM00829	Enoylreductase
WSWS_00188	SM01400	WSWS_00188
WSWS_00198	SM00382	ATPases associated with a variety of cellular activities
WSWS_00199	SM00382	ATPases associated with a variety of cellular activities
WSWS_00202	SM00487	DEAD-like helicases superfamily
WSWS_00202	SM00490	helicase superfamily c-terminal domain
WSWS_00212	SM00487	DEAD-like helicases superfamily
WSWS_00212	SM00490	helicase superfamily c-terminal domain
WSWS_00240	SM00382	ATPases associated with a variety of cellular activities
WSWS_00244	SM00072	Guanylate kinase homologues.
WSWS_00247	SM00382	ATPases associated with a variety of cellular activities
WSWS_00248	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_00248	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WSWS_00254	SM00382	ATPases associated with a variety of cellular activities
WSWS_00255	SM00382	ATPases associated with a variety of cellular activities
WSWS_00260	SM00479	WSWS_00260
WSWS_00260	SM00481	DNA polymerase alpha chain like domain
WSWS_00266	SM00487	DEAD-like helicases superfamily
WSWS_00266	SM00490	helicase superfamily c-terminal domain
WSWS_00270	SM00316	Ribosomal protein S1-like RNA-binding domain
WSWS_00270	SM00732	Likely ribonuclease with RNase H fold.
WSWS_00273	SM00382	ATPases associated with a variety of cellular activities
WSWS_00278	SM00883	Chaperonin 10 Kd subunit
WSWS_00280	SM00357	Cold shock protein domain
WSWS_00283	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_00283	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WSWS_00284	SM00382	ATPases associated with a variety of cellular activities
WSWS_00288	SM00382	ATPases associated with a variety of cellular activities
WSWS_00297	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_00297	SM00866	WSWS_00297
WSWS_00299	SM00363	S4 RNA-binding domain
WSWS_00299	SM01390	WSWS_00299
WSWS_00303	SM00257	Lysin motif
WSWS_00305	SM00382	ATPases associated with a variety of cellular activities
WSWS_00314	SM00382	ATPases associated with a variety of cellular activities
WSWS_00315	SM00354	helix_turn _helix lactose operon repressor
WSWS_00318	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WSWS_00320	SM00732	Likely ribonuclease with RNase H fold.
WSWS_00324	SM00046	Diacylglycerol kinase catalytic domain (presumed)
WSWS_00327	SM00788	Adenylosuccinate synthetase
WSWS_00333	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WSWS_00338	SM00358	Double-stranded RNA binding motif
WSWS_00338	SM00535	Ribonuclease III family
WSWS_00339	SM00968	SMC proteins Flexible Hinge Domain
WSWS_00340	SM00382	ATPases associated with a variety of cellular activities
WSWS_00340	SM00962	SRP54-type protein, GTPase domain
WSWS_00340	SM00963	SRP54-type protein, helical bundle domain
WSWS_00342	SM00382	ATPases associated with a variety of cellular activities
WSWS_00342	SM00962	SRP54-type protein, GTPase domain
WSWS_00342	SM00963	SRP54-type protein, helical bundle domain
WSWS_00351	SM00853	MutL C terminal dimerisation domain
WSWS_00351	SM01340	WSWS_00351
WSWS_00353	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WSWS_00355	SM00998	Adenylosuccinate lyase C-terminus
WSWS_00357	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_00361	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
WSWS_00362	SM00822	WSWS_00362
WSWS_00363	SM00825	Beta-ketoacyl synthase
WSWS_00366	SM00878	Biotin carboxylase C-terminal domain
WSWS_00385	SM00382	ATPases associated with a variety of cellular activities
WSWS_00386	SM00382	ATPases associated with a variety of cellular activities
WSWS_00390	SM00354	helix_turn _helix lactose operon repressor
WSWS_00391	SM01001	AIR carboxylase
WSWS_00395	SM01211	WSWS_00395
WSWS_00400	SM00798	AICARFT/IMPCHase bienzyme
WSWS_00400	SM00851	MGS-like domain
WSWS_00401	SM01209	WSWS_00401
WSWS_00401	SM01210	WSWS_00401
WSWS_00409	SM00354	helix_turn _helix lactose operon repressor
WSWS_00413	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
WSWS_00421	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WSWS_00422	SM00382	ATPases associated with a variety of cellular activities
WSWS_00425	SM01323	WSWS_00425
WSWS_00431	SM00422	helix_turn_helix, mercury resistance
WSWS_00443	SM00382	ATPases associated with a variety of cellular activities
WSWS_00444	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_00450	SM00257	Lysin motif
WSWS_00454	SM00363	S4 RNA-binding domain
WSWS_00456	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WSWS_00457	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WSWS_00459	SM00342	helix_turn_helix, arabinose operon control protein
WSWS_00460	SM01217	WSWS_00460
WSWS_00467	SM01061	CAT RNA binding domain
WSWS_00475	SM00740	WSWS_00475
WSWS_00480	SM00842	Cell division protein FtsA
WSWS_00481	SM00864	Tubulin/FtsZ family, GTPase domain
WSWS_00481	SM00865	Tubulin/FtsZ family, C-terminal domain
WSWS_00484	SM00363	S4 RNA-binding domain
WSWS_00488	SM00382	ATPases associated with a variety of cellular activities
WSWS_00493	SM00487	DEAD-like helicases superfamily
WSWS_00493	SM00490	helicase superfamily c-terminal domain
WSWS_00509	SM00363	S4 RNA-binding domain
WSWS_00512	SM00487	DEAD-like helicases superfamily
WSWS_00512	SM00490	helicase superfamily c-terminal domain
WSWS_00515	SM00316	Ribosomal protein S1-like RNA-binding domain
WSWS_00517	SM00411	bacterial (prokaryotic) histone like domain
WSWS_00523	SM00838	Elongation factor G C-terminus
WSWS_00528	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WSWS_00533	SM00463	Small MutS-related domain
WSWS_00533	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WSWS_00533	SM00534	ATPase domain of DNA mismatch repair MUTS family
WSWS_00543	SM00836	DALR anticodon binding domain
WSWS_00543	SM01016	Arginyl tRNA synthetase N terminal dom
WSWS_00544	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_00544	SM00866	WSWS_00544
WSWS_00547	SM00642	Alpha-amylase domain
WSWS_00559	SM00382	ATPases associated with a variety of cellular activities
WSWS_00565	SM00382	ATPases associated with a variety of cellular activities
WSWS_00577	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
WSWS_00577	SM00474	3'-5' exonuclease
WSWS_00577	SM00475	5'-3' exonuclease
WSWS_00577	SM00482	DNA polymerase A domain
WSWS_00585	SM00855	Phosphoglycerate mutase family
WSWS_00586	SM01057	Eukaryotic-type carbonic anhydrase
WSWS_00587	SM00562	WSWS_00587
WSWS_00598	SM00479	WSWS_00598
WSWS_00598	SM00491	WSWS_00598
WSWS_00604	SM00382	ATPases associated with a variety of cellular activities
WSWS_00607	SM00481	DNA polymerase alpha chain like domain
WSWS_00609	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
WSWS_00609	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
WSWS_00611	SM00448	cheY-homologous receiver domain
WSWS_00611	SM00862	Transcriptional regulatory protein, C terminal
WSWS_00612	SM00387	Histidine kinase-like ATPases
WSWS_00612	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_00620	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
WSWS_00620	SM01232	WSWS_00620
WSWS_00626	SM00448	cheY-homologous receiver domain
WSWS_00626	SM00862	Transcriptional regulatory protein, C terminal
WSWS_00627	SM00387	Histidine kinase-like ATPases
WSWS_00627	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_00638	SM00904	Riboflavin kinase
WSWS_00641	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_00651	SM01217	WSWS_00651
WSWS_00653	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_00656	SM00822	WSWS_00656
WSWS_00657	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_00660	SM00382	ATPases associated with a variety of cellular activities
WSWS_00665	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
WSWS_00665	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WSWS_00665	SM00493	WSWS_00665
WSWS_00668	SM01207	WSWS_00668
WSWS_00669	SM00387	Histidine kinase-like ATPases
WSWS_00669	SM00433	TopoisomeraseII
WSWS_00670	SM00434	DNA Topoisomerase IV
WSWS_00671	SM00838	Elongation factor G C-terminus
WSWS_00674	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WSWS_00674	SM00292	breast cancer carboxy-terminal domain
WSWS_00674	SM00532	Ligase N family
WSWS_00677	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_00678	SM00487	DEAD-like helicases superfamily
WSWS_00678	SM00490	helicase superfamily c-terminal domain
WSWS_00681	SM00382	ATPases associated with a variety of cellular activities
WSWS_00691	SM00861	Transketolase, pyrimidine binding domain
WSWS_00697	SM00740	WSWS_00697
WSWS_00709	SM00382	ATPases associated with a variety of cellular activities
WSWS_00711	SM00421	helix_turn_helix, Lux Regulon
WSWS_00711	SM00448	cheY-homologous receiver domain
WSWS_00712	SM00387	Histidine kinase-like ATPases
WSWS_00714	SM00422	helix_turn_helix, mercury resistance
WSWS_00721	SM00900	WSWS_00721
WSWS_00727	SM00422	helix_turn_helix, mercury resistance
WSWS_00733	SM00420	helix_turn_helix, Deoxyribose operon repressor
WSWS_00733	SM01134	WSWS_00733
WSWS_00736	SM00382	ATPases associated with a variety of cellular activities
WSWS_00739	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_00740	SM00382	ATPases associated with a variety of cellular activities
WSWS_00746	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_00746	SM00954	Region found in RelA / SpoT proteins
WSWS_00748	SM00400	zinc finger
WSWS_00748	SM00493	WSWS_00748
WSWS_00751	SM00882	Coenzyme A transferase
WSWS_00753	SM00382	ATPases associated with a variety of cellular activities
WSWS_00756	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_00756	SM00866	WSWS_00756
WSWS_00759	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WSWS_00764	SM00487	DEAD-like helicases superfamily
WSWS_00771	SM00342	helix_turn_helix, arabinose operon control protein
WSWS_00777	SM00642	Alpha-amylase domain
WSWS_00779	SM00354	helix_turn _helix lactose operon repressor
WSWS_00784	SM00116	Domain in cystathionine beta-synthase and other proteins.
WSWS_00784	SM00382	ATPases associated with a variety of cellular activities
WSWS_00785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_00787	SM00382	ATPases associated with a variety of cellular activities
WSWS_00787	SM00994	ClpX C4-type zinc finger
WSWS_00787	SM01086	C-terminal, D2-small domain, of ClpB protein
WSWS_00792	SM00849	Metallo-beta-lactamase superfamily
WSWS_00795	SM01387	WSWS_00795
WSWS_00797	SM00849	Metallo-beta-lactamase superfamily
WSWS_00798	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WSWS_00799	SM00028	Tetratricopeptide repeats
WSWS_00805	SM00644	WSWS_00805
WSWS_00806	SM00047	Lysozyme subfamily 2
WSWS_00814	SM00849	Metallo-beta-lactamase superfamily
WSWS_00826	SM00046	Diacylglycerol kinase catalytic domain (presumed)
WSWS_00830	SM00382	ATPases associated with a variety of cellular activities
WSWS_00831	SM00382	ATPases associated with a variety of cellular activities
WSWS_00834	SM01131	WSWS_00834
WSWS_00844	SM00563	Phosphate acyltransferases
WSWS_00846	SM00465	GIY-YIG type nucleases (URI domain)
WSWS_00848	SM00382	ATPases associated with a variety of cellular activities
WSWS_00851	SM00382	ATPases associated with a variety of cellular activities
WSWS_00851	SM00843	WSWS_00851
WSWS_00857	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WSWS_00859	SM01130	WSWS_00859
WSWS_00863	SM01005	Alanine racemase, C-terminal domain
WSWS_00865	SM00829	Enoylreductase
WSWS_00876	SM00257	Lysin motif
WSWS_00882	SM00382	ATPases associated with a variety of cellular activities
WSWS_00889	SM00954	Region found in RelA / SpoT proteins
WSWS_00890	SM01350	WSWS_00890
WSWS_00893	SM00845	GatB domain
WSWS_00900	SM01400	WSWS_00900
WSWS_00903	SM00382	ATPases associated with a variety of cellular activities
WSWS_00911	SM01240	WSWS_00911
WSWS_00918	SM00052	Putative diguanylate phosphodiesterase
WSWS_00919	SM00267	diguanylate cyclase
WSWS_00922	SM00641	Glycosyl hydrolases family 25
WSWS_00941	SM00986	Uracil DNA glycosylase superfamily
WSWS_00941	SM00987	UreE urease accessory protein, C-terminal domain 
WSWS_00942	SM00507	HNH nucleases
WSWS_00944	SM01266	WSWS_00944
WSWS_00962	SM00530	Helix-turn-helix XRE-family like proteins 
WSWS_00971	SM00052	Putative diguanylate phosphodiesterase
WSWS_00972	SM00267	diguanylate cyclase
WSWS_00978	SM00052	Putative diguanylate phosphodiesterase
WSWS_00979	SM00267	diguanylate cyclase
WSWS_00980	SM00387	Histidine kinase-like ATPases
WSWS_00980	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_00981	SM00448	cheY-homologous receiver domain
WSWS_00981	SM00862	Transcriptional regulatory protein, C terminal
WSWS_00984	SM00382	ATPases associated with a variety of cellular activities
WSWS_00986	SM00257	Lysin motif
WSWS_00987	SM00257	Lysin motif
WSWS_00992	SM00382	ATPases associated with a variety of cellular activities
WSWS_00995	SM00028	Tetratricopeptide repeats
WSWS_00996	SM00855	Phosphoglycerate mutase family
WSWS_01000	SM00244	prohibitin homologues
WSWS_01018	SM00357	Cold shock protein domain
WSWS_01022	SM00382	ATPases associated with a variety of cellular activities
WSWS_01023	SM00382	ATPases associated with a variety of cellular activities
WSWS_01024	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_01027	SM00829	Enoylreductase
WSWS_01034	SM00382	ATPases associated with a variety of cellular activities
WSWS_01036	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_01044	SM00342	helix_turn_helix, arabinose operon control protein
WSWS_01052	SM01007	Class II Aldolase and Adducin N-terminal domain
WSWS_01054	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WSWS_01056	SM00640	Glycosyl hydrolases family 32
WSWS_01058	SM00354	helix_turn _helix lactose operon repressor
WSWS_01064	SM00287	Bacterial SH3 domain homologues
WSWS_01064	SM00646	WSWS_01064
WSWS_01076	SM00382	ATPases associated with a variety of cellular activities
WSWS_01088	SM00271	DnaJ molecular chaperone homology domain
WSWS_01094	SM00382	ATPases associated with a variety of cellular activities
WSWS_01105	SM00155	Phospholipase D. Active site motifs.
WSWS_01113	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_01118	SM00838	Elongation factor G C-terminus
WSWS_01129	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WSWS_01131	SM00851	MGS-like domain
WSWS_01131	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WSWS_01132	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WSWS_01141	SM00479	WSWS_01141
WSWS_01146	SM00487	DEAD-like helicases superfamily
WSWS_01146	SM00490	helicase superfamily c-terminal domain
WSWS_01147	SM01120	WSWS_01147
WSWS_01147	SM01121	WSWS_01147
WSWS_01150	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
WSWS_01153	SM00220	Serine/Threonine protein kinases, catalytic domain
WSWS_01153	SM00740	WSWS_01153
WSWS_01154	SM00331	Sigma factor PP2C-like phosphatases
WSWS_01154	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
WSWS_01157	SM00487	DEAD-like helicases superfamily
WSWS_01157	SM00490	helicase superfamily c-terminal domain
WSWS_01169	SM00047	Lysozyme subfamily 2
WSWS_01170	SM00382	ATPases associated with a variety of cellular activities
WSWS_01171	SM00382	ATPases associated with a variety of cellular activities
WSWS_01174	SM00530	Helix-turn-helix XRE-family like proteins 
WSWS_01195	SM00316	Ribosomal protein S1-like RNA-binding domain
WSWS_01199	SM01409	WSWS_01199
WSWS_01200	SM00072	Guanylate kinase homologues.
WSWS_01210	SM00382	ATPases associated with a variety of cellular activities
WSWS_01214	SM00382	ATPases associated with a variety of cellular activities
WSWS_01215	SM00881	CoA binding domain
WSWS_01216	SM00487	DEAD-like helicases superfamily
WSWS_01216	SM00490	helicase superfamily c-terminal domain
WSWS_01219	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WSWS_01219	SM00534	ATPase domain of DNA mismatch repair MUTS family
WSWS_01224	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_01226	SM01103	WSWS_01226
WSWS_01229	SM00257	Lysin motif
WSWS_01231	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
WSWS_01235	SM00530	Helix-turn-helix XRE-family like proteins 
WSWS_01237	SM00892	DNA/RNA non-specific endonuclease
WSWS_01239	SM01192	WSWS_01239
WSWS_01239	SM01193	WSWS_01239
WSWS_01252	SM00838	Elongation factor G C-terminus
WSWS_01252	SM00889	Elongation factor G, domain IV
WSWS_01261	SM00841	Elongation factor P, C-terminal
WSWS_01261	SM01185	WSWS_01261
WSWS_01265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WSWS_01265	SM00387	Histidine kinase-like ATPases
WSWS_01265	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_01266	SM00448	cheY-homologous receiver domain
WSWS_01266	SM00862	Transcriptional regulatory protein, C terminal
WSWS_01267	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_01269	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WSWS_01269	SM00493	WSWS_01269
WSWS_01270	SM00322	K homology RNA-binding domain
WSWS_01270	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_01276	SM00829	Enoylreductase
WSWS_01280	SM00316	Ribosomal protein S1-like RNA-binding domain
WSWS_01280	SM00955	WSWS_01280
WSWS_01288	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
WSWS_01304	SM01230	WSWS_01304
WSWS_01305	SM00422	helix_turn_helix, mercury resistance
WSWS_01308	SM00450	Rhodanese Homology Domain
WSWS_01309	SM00257	Lysin motif
WSWS_01318	SM00382	ATPases associated with a variety of cellular activities
WSWS_01319	SM00382	ATPases associated with a variety of cellular activities
WSWS_01325	SM00382	ATPases associated with a variety of cellular activities
WSWS_01333	SM00382	ATPases associated with a variety of cellular activities
WSWS_01337	SM00382	ATPases associated with a variety of cellular activities
WSWS_01338	SM00855	Phosphoglycerate mutase family
WSWS_01341	SM00873	B3/4 domain
WSWS_01341	SM00874	tRNA synthetase B5 domain
WSWS_01341	SM00896	Ferredoxin-fold anticodon binding domain
WSWS_01344	SM00670	Large family of predicted nucleotide-binding domains
WSWS_01345	SM00382	ATPases associated with a variety of cellular activities
WSWS_01349	SM00257	Lysin motif
WSWS_01350	SM00382	ATPases associated with a variety of cellular activities
WSWS_01350	SM01086	C-terminal, D2-small domain, of ClpB protein
WSWS_01351	SM00829	Enoylreductase
WSWS_01353	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_01364	SM00937	WSWS_01364
WSWS_01365	SM00957	SecA DEAD-like domain
WSWS_01365	SM00958	SecA preprotein cross-linking domain
WSWS_01374	SM00382	ATPases associated with a variety of cellular activities
WSWS_01376	SM00855	Phosphoglycerate mutase family
WSWS_01377	SM00487	DEAD-like helicases superfamily
WSWS_01377	SM00490	helicase superfamily c-terminal domain
WSWS_01381	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WSWS_01383	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WSWS_01384	SM00849	Metallo-beta-lactamase superfamily
WSWS_01387	SM00091	PAS domain
WSWS_01387	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WSWS_01387	SM00387	Histidine kinase-like ATPases
WSWS_01387	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_01388	SM00448	cheY-homologous receiver domain
WSWS_01388	SM00862	Transcriptional regulatory protein, C terminal
WSWS_01394	SM00493	WSWS_01394
WSWS_01396	SM00382	ATPases associated with a variety of cellular activities
WSWS_01402	SM00530	Helix-turn-helix XRE-family like proteins 
WSWS_01406	SM00382	ATPases associated with a variety of cellular activities
WSWS_01441	SM00363	S4 RNA-binding domain
WSWS_01442	SM01350	WSWS_01442
WSWS_01465	SM00382	ATPases associated with a variety of cellular activities
WSWS_01469	SM00363	S4 RNA-binding domain
WSWS_01471	SM00487	DEAD-like helicases superfamily
WSWS_01471	SM00490	helicase superfamily c-terminal domain
WSWS_01471	SM00982	WSWS_01471
WSWS_01471	SM01058	CarD-like/TRCF domain
WSWS_01477	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WSWS_01492	SM00382	ATPases associated with a variety of cellular activities
WSWS_01498	SM00116	Domain in cystathionine beta-synthase and other proteins.
WSWS_01498	SM01091	Transporter associated domain
WSWS_01499	SM00116	Domain in cystathionine beta-synthase and other proteins.
WSWS_01499	SM01091	Transporter associated domain
WSWS_01500	SM00650	Ribosomal RNA adenine dimethylases
WSWS_01501	SM00493	WSWS_01501
WSWS_01513	SM00354	helix_turn _helix lactose operon repressor
WSWS_01515	SM01038	Beta galactosidase small chain
WSWS_01528	SM00257	Lysin motif
WSWS_01528	SM00382	ATPases associated with a variety of cellular activities
WSWS_01542	SM00422	helix_turn_helix, mercury resistance
WSWS_01546	SM00434	DNA Topoisomerase IV
WSWS_01547	SM00387	Histidine kinase-like ATPases
WSWS_01547	SM00433	TopoisomeraseII
WSWS_01552	SM00480	DNA polymerase III beta subunit
WSWS_01553	SM00382	ATPases associated with a variety of cellular activities
WSWS_01553	SM00760	Bacterial dnaA protein helix-turn-helix domain
WSWS_01571	SM00062	Bacterial periplasmic substrate-binding proteins
WSWS_01573	SM00382	ATPases associated with a variety of cellular activities
WSWS_01587	SM00347	helix_turn_helix multiple antibiotic resistance protein
WSWS_01588	SM00829	Enoylreductase
WSWS_01604	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WSWS_01610	SM00641	Glycosyl hydrolases family 25
WSWS_01620	SM00829	Enoylreductase
WSWS_01623	SM00870	WSWS_01623
WSWS_01629	SM00448	cheY-homologous receiver domain
WSWS_01629	SM00862	Transcriptional regulatory protein, C terminal
WSWS_01630	SM00387	Histidine kinase-like ATPases
WSWS_01630	SM00388	His Kinase A (phosphoacceptor) domain
WSWS_01633	SM00341	Helicase and RNase D C-terminal
WSWS_01633	SM00487	DEAD-like helicases superfamily
WSWS_01633	SM00490	helicase superfamily c-terminal domain
WSWS_01633	SM00956	WSWS_01633
