locus-tag class description L3V65_00005 PF00308 Bacterial dnaA protein L3V65_00005 PF08299 Bacterial dnaA protein helix-turn-helix L3V65_00005 PF11638 DnaA N-terminal domain L3V65_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain L3V65_00010 PF02767 DNA polymerase III beta subunit, central domain L3V65_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain L3V65_00020 PF02463 RecF/RecN/SMC N terminal domain L3V65_00025 PF04025 Domain of unknown function (DUF370) L3V65_00030 PF01751 Toprim domain L3V65_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_00030 PF00204 DNA gyrase B L3V65_00030 PF00986 DNA gyrase B subunit, carboxyl terminus L3V65_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller L3V65_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A L3V65_00040 PF00072 Response regulator receiver domain L3V65_00070 PF10764 Inhibitor of sigma-G Gin L3V65_00075 PF01276 Orn/Lys/Arg decarboxylase, major domain L3V65_00075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L3V65_00080 PF02223 Thymidylate kinase L3V65_00085 PF06153 Cyclic-di-AMP receptor L3V65_00090 PF03885 Protein of unknown function (DUF327) L3V65_00095 PF09115 DNA polymerase III, delta subunit, C terminal L3V65_00100 PF04468 PSP1 C-terminal conserved region L3V65_00105 PF06156 Initiation control protein YabA L3V65_00110 PF05175 Methyltransferase small domain L3V65_00115 PF01541 GIY-YIG catalytic domain L3V65_00120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3V65_00130 PF01588 Putative tRNA binding domain L3V65_00130 PF08264 Anticodon-binding domain of tRNA L3V65_00130 PF09334 tRNA synthetases class I (M) L3V65_00135 PF01026 TatD related DNase L3V65_00140 PF13331 Domain of unknown function (DUF4093) L3V65_00140 PF13662 Toprim domain L3V65_00145 PF00398 Ribosomal RNA adenine dimethylase L3V65_00150 PF05582 YabG peptidase U57 L3V65_00155 PF06257 Biofilm formation stimulator VEG L3V65_00160 PF00269 Small, acid-soluble spore proteins, alpha/beta type L3V65_00170 PF09182 Bacterial purine repressor, N-terminal L3V65_00170 PF00156 Phosphoribosyl transferase domain L3V65_00175 PF01042 Endoribonuclease L-PSP L3V65_00180 PF04026 SpoVG L3V65_00195 PF00132 Bacterial transferase hexapeptide (six repeats) L3V65_00195 PF00483 Nucleotidyl transferase L3V65_00200 PF14572 Phosphoribosyl synthetase-associated domain L3V65_00200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L3V65_00205 PF01386 Ribosomal L25p family L3V65_00205 PF14693 Ribosomal protein TL5, C-terminal domain L3V65_00210 PF01195 Peptidyl-tRNA hydrolase L3V65_00215 PF10955 Protein of unknown function (DUF2757) L3V65_00220 PF02559 CarD-like/TRCF domain L3V65_00220 PF00270 DEAD/DEAH box helicase L3V65_00220 PF00271 Helicase conserved C-terminal domain L3V65_00220 PF03461 TRCF domain L3V65_00220 PF17757 UvrB interaction domain L3V65_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L3V65_00225 PF15714 Stage V sporulation protein T C-terminal, transcription factor L3V65_00230 PF14667 Polysaccharide biosynthesis C-terminal domain L3V65_00230 PF01943 Polysaccharide biosynthesis protein L3V65_00235 PF03819 MazG nucleotide pyrophosphohydrolase domain L3V65_00235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3V65_00240 PF01479 S4 domain L3V65_00245 PF07873 YabP family L3V65_00250 PF09578 Spore cortex protein YabQ (Spore_YabQ) L3V65_00260 PF00575 S1 RNA binding domain L3V65_00270 PF07228 Stage II sporulation protein E (SpoIIE) L3V65_00275 PF00092 von Willebrand factor type A domain L3V65_00280 PF00069 Protein kinase domain L3V65_00285 PF01171 PP-loop family L3V65_00285 PF09179 TilS substrate binding domain L3V65_00285 PF11734 TilS substrate C-terminal domain L3V65_00290 PF00156 Phosphoribosyl transferase domain L3V65_00295 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_00295 PF17862 AAA+ lid domain L3V65_00295 PF06480 FtsH Extracellular L3V65_00295 PF01434 Peptidase family M41 L3V65_00300 PF03309 Type III pantothenate kinase L3V65_00305 PF01430 Hsp33 protein L3V65_00310 PF00291 Pyridoxal-phosphate dependent enzyme L3V65_00315 PF00809 Pterin binding enzyme L3V65_00320 PF02152 Dihydroneopterin aldolase L3V65_00325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L3V65_00330 PF00152 tRNA synthetases class II (D, K and N) L3V65_00330 PF01336 OB-fold nucleic acid binding domain L3V65_00400 PF14175 YaaC-like Protein L3V65_00405 PF00571 CBS domain L3V65_00405 PF00478 IMP dehydrogenase / GMP reductase domain L3V65_00410 PF07943 Penicillin-binding protein 5, C-terminal domain L3V65_00410 PF00768 D-alanyl-D-alanine carboxypeptidase L3V65_00415 PF01680 SOR/SNZ family L3V65_00420 PF01174 SNO glutamine amidotransferase family L3V65_00425 PF02403 Seryl-tRNA synthetase N-terminal domain L3V65_00425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3V65_00435 PF01712 Deoxynucleoside kinase L3V65_00440 PF01712 Deoxynucleoside kinase L3V65_00450 PF14437 MafB19-like deaminase L3V65_00460 PF12169 DNA polymerase III subunits gamma and tau domain III L3V65_00465 PF02575 YbaB/EbfC DNA-binding family L3V65_00470 PF13662 Toprim domain L3V65_00470 PF02132 RecR protein L3V65_00525 PF00005 ABC transporter L3V65_00525 PF09383 NIL domain L3V65_00565 PF05848 CtsR N-terminal HTH domain L3V65_00565 PF17727 CtsR C-terminal dimerization domain L3V65_00570 PF02151 UvrB/uvrC motif L3V65_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain L3V65_00580 PF10431 C-terminal, D2-small domain, of ClpB protein L3V65_00580 PF02861 Clp amino terminal domain, pathogenicity island component L3V65_00580 PF17871 AAA lid domain L3V65_00580 PF07724 AAA domain (Cdc48 subfamily) L3V65_00580 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_00585 PF18073 Rubredoxin metal binding domain L3V65_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L3V65_00600 PF02542 YgbB family L3V65_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain L3V65_00610 PF00132 Bacterial transferase hexapeptide (six repeats) L3V65_00610 PF06426 Serine acetyltransferase, N-terminal L3V65_00615 PF01406 tRNA synthetases class I (C) catalytic domain L3V65_00615 PF09190 DALR domain L3V65_00620 PF00636 Ribonuclease III domain L3V65_00625 PF00588 SpoU rRNA Methylase family L3V65_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3V65_00630 PF05991 YacP-like NYN domain L3V65_00635 PF04542 Sigma-70 region 2 L3V65_00635 PF08281 Sigma-70, region 4 L3V65_00640 PF00471 Ribosomal protein L33 L3V65_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex L3V65_00650 PF02357 Transcription termination factor nusG L3V65_00650 PF00467 KOW motif L3V65_00655 PF00298 Ribosomal protein L11, RNA binding domain L3V65_00655 PF03946 Ribosomal protein L11, N-terminal domain L3V65_00660 PF00687 Ribosomal protein L1p/L10e family L3V65_00665 PF00466 Ribosomal protein L10 L3V65_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain L3V65_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain L3V65_00675 PF05175 Methyltransferase small domain L3V65_00680 PF04561 RNA polymerase Rpb2, domain 2 L3V65_00680 PF04560 RNA polymerase Rpb2, domain 7 L3V65_00680 PF00562 RNA polymerase Rpb2, domain 6 L3V65_00680 PF04563 RNA polymerase beta subunit L3V65_00680 PF04565 RNA polymerase Rpb2, domain 3 L3V65_00680 PF10385 RNA polymerase beta subunit external 1 domain L3V65_00685 PF04997 RNA polymerase Rpb1, domain 1 L3V65_00685 PF00623 RNA polymerase Rpb1, domain 2 L3V65_00685 PF04983 RNA polymerase Rpb1, domain 3 L3V65_00685 PF05000 RNA polymerase Rpb1, domain 4 L3V65_00685 PF04998 RNA polymerase Rpb1, domain 5 L3V65_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L3V65_00695 PF00164 Ribosomal protein S12/S23 L3V65_00700 PF00177 Ribosomal protein S7p/S5e L3V65_00705 PF00009 Elongation factor Tu GTP binding domain L3V65_00705 PF00679 Elongation factor G C-terminus L3V65_00705 PF14492 Elongation Factor G, domain II L3V65_00705 PF03764 Elongation factor G, domain IV L3V65_00705 PF03144 Elongation factor Tu domain 2 L3V65_00710 PF03144 Elongation factor Tu domain 2 L3V65_00710 PF00009 Elongation factor Tu GTP binding domain L3V65_00710 PF03143 Elongation factor Tu C-terminal domain L3V65_00715 PF00338 Ribosomal protein S10p/S20e L3V65_00720 PF00297 Ribosomal protein L3 L3V65_00725 PF00573 Ribosomal protein L4/L1 family L3V65_00730 PF00276 Ribosomal protein L23 L3V65_00735 PF00181 Ribosomal Proteins L2, RNA binding domain L3V65_00735 PF03947 Ribosomal Proteins L2, C-terminal domain L3V65_00740 PF00203 Ribosomal protein S19 L3V65_00745 PF00237 Ribosomal protein L22p/L17e L3V65_00750 PF00189 Ribosomal protein S3, C-terminal domain L3V65_00750 PF07650 KH domain L3V65_00755 PF00252 Ribosomal protein L16p/L10e L3V65_00760 PF00831 Ribosomal L29 protein L3V65_00765 PF00366 Ribosomal protein S17 L3V65_00770 PF00238 Ribosomal protein L14p/L23e L3V65_00775 PF00467 KOW motif L3V65_00775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L3V65_00780 PF00281 Ribosomal protein L5 L3V65_00780 PF00673 ribosomal L5P family C-terminus L3V65_00785 PF00253 Ribosomal protein S14p/S29e L3V65_00790 PF00410 Ribosomal protein S8 L3V65_00795 PF00347 Ribosomal protein L6 L3V65_00800 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L3V65_00805 PF00333 Ribosomal protein S5, N-terminal domain L3V65_00805 PF03719 Ribosomal protein S5, C-terminal domain L3V65_00810 PF00327 Ribosomal protein L30p/L7e L3V65_00815 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L3V65_00820 PF00344 SecY translocase L3V65_00825 PF05191 Adenylate kinase, active site lid L3V65_00830 PF01176 Translation initiation factor 1A / IF-1 L3V65_00835 PF00444 Ribosomal protein L36 L3V65_00840 PF00416 Ribosomal protein S13/S18 L3V65_00845 PF00411 Ribosomal protein S11 L3V65_00850 PF01000 RNA polymerase Rpb3/RpoA insert domain L3V65_00850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L3V65_00850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L3V65_00855 PF01196 Ribosomal protein L17 L3V65_00860 PF00005 ABC transporter L3V65_00865 PF00005 ABC transporter L3V65_00870 PF02361 Cobalt transport protein L3V65_00875 PF01416 tRNA pseudouridine synthase L3V65_00880 PF00572 Ribosomal protein L13 L3V65_00885 PF00380 Ribosomal protein S9/S16 L3V65_00895 PF01747 ATP-sulfurylase L3V65_00895 PF14306 PUA-like domain L3V65_00905 PF00324 Amino acid permease L3V65_00915 PF01520 N-acetylmuramoyl-L-alanine amidase L3V65_00920 PF10609 NUBPL iron-transfer P-loop NTPase L3V65_00925 PF17898 Spore germination GerD central core domain L3V65_00930 PF14089 KinB-signalling pathway activation in sporulation L3V65_00940 PF12833 Helix-turn-helix domain L3V65_00945 PF07883 Cupin domain L3V65_00955 PF01522 Polysaccharide deacetylase L3V65_00965 PF01654 Cytochrome bd terminal oxidase subunit I L3V65_00970 PF02322 Cytochrome bd terminal oxidase subunit II L3V65_00975 PF00664 ABC transporter transmembrane region L3V65_00975 PF00005 ABC transporter L3V65_00980 PF00664 ABC transporter transmembrane region L3V65_00980 PF00005 ABC transporter L3V65_01045 PF00491 Arginase family L3V65_01055 PF08281 Sigma-70, region 4 L3V65_01055 PF04542 Sigma-70 region 2 L3V65_01065 PF02457 DisA bacterial checkpoint controller nucleotide-binding L3V65_01070 PF07949 YbbR-like protein L3V65_01075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3V65_01075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3V65_01075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3V65_01075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3V65_01080 PF01380 SIS domain L3V65_01110 PF07690 Major Facilitator Superfamily L3V65_01115 PF03466 LysR substrate binding domain L3V65_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_01125 PF02146 Sir2 family L3V65_01140 PF00368 Hydroxymethylglutaryl-coenzyme A reductase L3V65_01145 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal L3V65_01145 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal L3V65_01150 PF02803 Thiolase, C-terminal domain L3V65_01150 PF00108 Thiolase, N-terminal domain L3V65_01165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3V65_01165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3V65_01170 PF00571 CBS domain L3V65_01170 PF00005 ABC transporter L3V65_01175 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_01185 PF01446 Replication protein L3V65_01200 PF00258 Flavodoxin L3V65_01205 PF00027 Cyclic nucleotide-binding domain L3V65_01205 PF13545 Crp-like helix-turn-helix domain L3V65_01215 PF13545 Crp-like helix-turn-helix domain L3V65_01215 PF00027 Cyclic nucleotide-binding domain L3V65_01220 PF00403 Heavy-metal-associated domain L3V65_01225 PF00403 Heavy-metal-associated domain L3V65_01235 PF00317 Ribonucleotide reductase, all-alpha domain L3V65_01235 PF03477 ATP cone domain L3V65_01235 PF02867 Ribonucleotide reductase, barrel domain L3V65_01245 PF00268 Ribonucleotide reductase, small chain L3V65_01250 PF02660 Glycerol-3-phosphate acyltransferase L3V65_01270 PF00893 Small Multidrug Resistance protein L3V65_01275 PF00893 Small Multidrug Resistance protein L3V65_01285 PF01032 FecCD transport family L3V65_01290 PF01032 FecCD transport family L3V65_01295 PF01497 Periplasmic binding protein L3V65_01300 PF00005 ABC transporter L3V65_01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_01325 PF01709 Transcriptional regulator L3V65_01330 PF01740 STAS domain L3V65_01330 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain L3V65_01355 PF12708 Pectate lyase superfamily protein L3V65_01355 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain L3V65_01365 PF01507 Phosphoadenosine phosphosulfate reductase family L3V65_01370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3V65_01375 PF01903 CbiX L3V65_01380 PF14824 Sirohaem biosynthesis protein central L3V65_01385 PF04073 Aminoacyl-tRNA editing domain L3V65_01395 PF00465 Iron-containing alcohol dehydrogenase L3V65_01400 PF00501 AMP-binding enzyme L3V65_01400 PF13193 AMP-binding enzyme C-terminal domain L3V65_01415 PF00892 EamA-like transporter family L3V65_01430 PF16916 Dimerisation domain of Zinc Transporter L3V65_01430 PF01545 Cation efflux family L3V65_01435 PF01380 SIS domain L3V65_01445 PF01501 Glycosyl transferase family 8 L3V65_01445 PF00535 Glycosyl transferase family 2 L3V65_01450 PF08544 GHMP kinases C terminal L3V65_01450 PF00288 GHMP kinases N terminal domain L3V65_01450 PF10509 Galactokinase galactose-binding signature L3V65_01460 PF08544 GHMP kinases C terminal L3V65_01460 PF00288 GHMP kinases N terminal domain L3V65_01470 PF13460 NAD(P)H-binding L3V65_01490 PF00155 Aminotransferase class I and II L3V65_01495 PF02627 Carboxymuconolactone decarboxylase family L3V65_01505 PF05167 Uncharacterised ACR (DUF711) L3V65_01515 PF01380 SIS domain L3V65_01520 PF07875 Coat F domain L3V65_01525 PF00248 Aldo/keto reductase family L3V65_01535 PF00324 Amino acid permease L3V65_01540 PF00854 POT family L3V65_01545 PF00324 Amino acid permease L3V65_01555 PF00005 ABC transporter L3V65_01555 PF08402 TOBE domain L3V65_01560 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_01565 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_01570 PF13416 Bacterial extracellular solute-binding protein L3V65_01580 PF13520 Amino acid permease L3V65_01585 PF02589 LUD domain L3V65_01590 PF02589 LUD domain L3V65_01590 PF13183 4Fe-4S dicluster domain L3V65_01590 PF11870 Domain of unknown function (DUF3390) L3V65_01595 PF02754 Cysteine-rich domain L3V65_01600 PF13520 Amino acid permease L3V65_01620 PF00909 Ammonium Transporter Family L3V65_01630 PF12323 Helix-turn-helix domain L3V65_01630 PF01385 Probable transposase L3V65_01630 PF07282 Putative transposase DNA-binding domain L3V65_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_01635 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L3V65_01635 PF00989 PAS fold L3V65_01635 PF17203 Single cache domain 3 L3V65_01640 PF00072 Response regulator receiver domain L3V65_01640 PF08279 HTH domain L3V65_01640 PF12431 Transcriptional regulator L3V65_01645 PF03600 Citrate transporter L3V65_01650 PF00535 Glycosyl transferase family 2 L3V65_01655 PF13538 UvrD-like helicase C-terminal domain L3V65_01690 PF04309 Glycerol-3-phosphate responsive antiterminator L3V65_01695 PF00230 Major intrinsic protein L3V65_01700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3V65_01700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3V65_01705 PF01266 FAD dependent oxidoreductase L3V65_01705 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L3V65_01710 PF00375 Sodium:dicarboxylate symporter family L3V65_01720 PF04264 YceI-like domain L3V65_01725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L3V65_01735 PF11871 Domain of unknown function (DUF3391) L3V65_01735 PF01966 HD domain L3V65_01745 PF13520 Amino acid permease L3V65_01750 PF02673 Bacitracin resistance protein BacA L3V65_01755 PF02416 mttA/Hcf106 family L3V65_01760 PF01594 AI-2E family transporter L3V65_01765 PF00005 ABC transporter L3V65_01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3V65_01775 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_01780 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_01795 PF01638 HxlR-like helix-turn-helix L3V65_01800 PF09335 SNARE associated Golgi protein L3V65_01805 PF09335 SNARE associated Golgi protein L3V65_01810 PF03816 Cell envelope-related transcriptional attenuator domain L3V65_01820 PF02574 Homocysteine S-methyltransferase L3V65_01820 PF02219 Methylenetetrahydrofolate reductase L3V65_01825 PF02310 B12 binding domain L3V65_01825 PF02607 B12 binding domain L3V65_01825 PF02965 Vitamin B12 dependent methionine synthase, activation domain L3V65_01825 PF00809 Pterin binding enzyme L3V65_01825 PF02574 Homocysteine S-methyltransferase L3V65_01850 PF13807 G-rich domain on putative tyrosine kinase L3V65_01850 PF02706 Chain length determinant protein L3V65_01855 PF13614 AAA domain L3V65_01865 PF00483 Nucleotidyl transferase L3V65_01870 PF02397 Bacterial sugar transferase L3V65_01875 PF13439 Glycosyltransferase Family 4 L3V65_01875 PF00534 Glycosyl transferases group 1 L3V65_01890 PF00535 Glycosyl transferase family 2 L3V65_01905 PF03275 UDP-galactopyranose mutase L3V65_01915 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L3V65_01920 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_01920 PF16912 Glucose dehydrogenase C-terminus L3V65_01935 PF10460 Peptidase M30 L3V65_01955 PF00107 Zinc-binding dehydrogenase L3V65_01955 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_01955 PF13823 Alcohol dehydrogenase GroES-associated L3V65_01960 PF02525 Flavodoxin-like fold L3V65_01975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L3V65_01975 PF08239 Bacterial SH3 domain L3V65_01975 PF05036 Sporulation related domain L3V65_01995 PF10026 Predicted Zn-dependent protease (DUF2268) L3V65_02005 PF07282 Putative transposase DNA-binding domain L3V65_02005 PF01385 Probable transposase L3V65_02005 PF12323 Helix-turn-helix domain L3V65_02010 PF08241 Methyltransferase domain L3V65_02015 PF02324 Glycosyl hydrolase family 70 L3V65_02015 PF01473 Putative cell wall binding repeat L3V65_02035 PF03060 Nitronate monooxygenase L3V65_02050 PF00753 Metallo-beta-lactamase superfamily L3V65_02050 PF03772 Competence protein L3V65_02050 PF13567 Domain of unknown function (DUF4131) L3V65_02060 PF07745 Glycosyl hydrolase family 53 L3V65_02070 PF09704 CRISPR-associated protein (Cas_Cas5) L3V65_02090 PF13520 Amino acid permease L3V65_02095 PF03816 Cell envelope-related transcriptional attenuator domain L3V65_02105 PF00248 Aldo/keto reductase family L3V65_02120 PF00107 Zinc-binding dehydrogenase L3V65_02120 PF16884 N-terminal domain of oxidoreductase L3V65_02140 PF00874 PRD domain L3V65_02140 PF05043 Mga helix-turn-helix domain L3V65_02140 PF08279 HTH domain L3V65_02140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3V65_02145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3V65_02150 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3V65_02160 PF02378 Phosphotransferase system, EIIC L3V65_02165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_02180 PF00083 Sugar (and other) transporter L3V65_02190 PF07690 Major Facilitator Superfamily L3V65_02200 PF08532 Beta-galactosidase trimerisation domain L3V65_02200 PF02449 Beta-galactosidase L3V65_02200 PF08533 Beta-galactosidase C-terminal domain L3V65_02205 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L3V65_02215 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02220 PF00005 ABC transporter L3V65_02220 PF00571 CBS domain L3V65_02225 PF12802 MarR family L3V65_02230 PF12464 Maltose acetyltransferase L3V65_02230 PF14602 Hexapeptide repeat of succinyl-transferase L3V65_02260 PF00135 Carboxylesterase family L3V65_02280 PF00465 Iron-containing alcohol dehydrogenase L3V65_02285 PF02445 Quinolinate synthetase A protein L3V65_02290 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L3V65_02290 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L3V65_02295 PF00890 FAD binding domain L3V65_02295 PF02910 Fumarate reductase flavoprotein C-term L3V65_02300 PF00266 Aminotransferase class-V L3V65_02315 PF00005 ABC transporter L3V65_02330 PF01226 Formate/nitrite transporter L3V65_02340 PF00005 ABC transporter L3V65_02340 PF12558 ATP-binding cassette cobalt transporter L3V65_02345 PF07155 ECF-type riboflavin transporter, S component L3V65_02380 PF03009 Glycerophosphoryl diester phosphodiesterase family L3V65_02390 PF00005 ABC transporter L3V65_02395 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02400 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02405 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3V65_02410 PF02872 5'-nucleotidase, C-terminal domain L3V65_02410 PF00149 Calcineurin-like phosphoesterase L3V65_02415 PF05343 M42 glutamyl aminopeptidase L3V65_02430 PF02652 L-lactate permease L3V65_02435 PF07729 FCD domain L3V65_02435 PF00392 Bacterial regulatory proteins, gntR family L3V65_02440 PF00155 Aminotransferase class I and II L3V65_02440 PF00392 Bacterial regulatory proteins, gntR family L3V65_02450 PF03816 Cell envelope-related transcriptional attenuator domain L3V65_02475 PF10460 Peptidase M30 L3V65_02480 PF02056 Family 4 glycosyl hydrolase L3V65_02480 PF11975 Family 4 glycosyl hydrolase C-terminal domain L3V65_02485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L3V65_02490 PF05043 Mga helix-turn-helix domain L3V65_02490 PF08279 HTH domain L3V65_02490 PF00874 PRD domain L3V65_02490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3V65_02500 PF08279 HTH domain L3V65_02500 PF05043 Mga helix-turn-helix domain L3V65_02500 PF00874 PRD domain L3V65_02500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3V65_02505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3V65_02510 PF00232 Glycosyl hydrolase family 1 L3V65_02515 PF02378 Phosphotransferase system, EIIC L3V65_02520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3V65_02525 PF02378 Phosphotransferase system, EIIC L3V65_02530 PF10710 Protein of unknown function (DUF2512) L3V65_02540 PF00793 DAHP synthetase I family L3V65_02550 PF01053 Cys/Met metabolism PLP-dependent enzyme L3V65_02555 PF01053 Cys/Met metabolism PLP-dependent enzyme L3V65_02560 PF03633 Glycosyl hydrolase family 65, C-terminal domain L3V65_02560 PF03632 Glycosyl hydrolase family 65 central catalytic domain L3V65_02560 PF03636 Glycosyl hydrolase family 65, N-terminal domain L3V65_02565 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02570 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02575 PF01547 Bacterial extracellular solute-binding protein L3V65_02580 PF17853 GGDEF-like domain L3V65_02580 PF12833 Helix-turn-helix domain L3V65_02590 PF03808 Glycosyl transferase WecB/TagA/CpsF family L3V65_02600 PF00107 Zinc-binding dehydrogenase L3V65_02600 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_02605 PF01545 Cation efflux family L3V65_02605 PF16916 Dimerisation domain of Zinc Transporter L3V65_02610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3V65_02610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3V65_02610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3V65_02610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3V65_02625 PF08239 Bacterial SH3 domain L3V65_02625 PF00005 ABC transporter L3V65_02635 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L3V65_02640 PF00510 Cytochrome c oxidase subunit III L3V65_02645 PF00115 Cytochrome C and Quinol oxidase polypeptide I L3V65_02650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L3V65_02655 PF13419 Haloacid dehalogenase-like hydrolase L3V65_02660 PF03816 Cell envelope-related transcriptional attenuator domain L3V65_02670 PF13419 Haloacid dehalogenase-like hydrolase L3V65_02675 PF03636 Glycosyl hydrolase family 65, N-terminal domain L3V65_02675 PF03632 Glycosyl hydrolase family 65 central catalytic domain L3V65_02675 PF03633 Glycosyl hydrolase family 65, C-terminal domain L3V65_02685 PF00356 Bacterial regulatory proteins, lacI family L3V65_02690 PF00512 His Kinase A (phospho-acceptor) domain L3V65_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_02700 PF00311 Phosphoenolpyruvate carboxylase L3V65_02710 PF00056 lactate/malate dehydrogenase, NAD binding domain L3V65_02710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L3V65_02715 PF01476 LysM domain L3V65_02715 PF06725 3D domain L3V65_02725 PF01061 ABC-2 type transporter L3V65_02730 PF01910 Thiamine-binding protein L3V65_02735 PF10282 Lactonase, 7-bladed beta-propeller L3V65_02745 PF03610 PTS system fructose IIA component L3V65_02745 PF00874 PRD domain L3V65_02745 PF00158 Sigma-54 interaction domain L3V65_02750 PF03830 PTS system sorbose subfamily IIB component L3V65_02750 PF03610 PTS system fructose IIA component L3V65_02755 PF03830 PTS system sorbose subfamily IIB component L3V65_02755 PF03610 PTS system fructose IIA component L3V65_02760 PF03609 PTS system sorbose-specific iic component L3V65_02765 PF03613 PTS system mannose/fructose/sorbose family IID component L3V65_02775 PF00285 Citrate synthase, C-terminal domain L3V65_02780 PF03972 MmgE/PrpD family L3V65_02795 PF01425 Amidase L3V65_02800 PF01910 Thiamine-binding protein L3V65_02805 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_02815 PF00005 ABC transporter L3V65_02820 PF08544 GHMP kinases C terminal L3V65_02820 PF00288 GHMP kinases N terminal domain L3V65_02825 PF00291 Pyridoxal-phosphate dependent enzyme L3V65_02830 PF03447 Homoserine dehydrogenase, NAD binding domain L3V65_02830 PF00742 Homoserine dehydrogenase L3V65_02830 PF01842 ACT domain L3V65_02835 PF00491 Arginase family L3V65_02845 PF01256 Carbohydrate kinase L3V65_02850 PF00483 Nucleotidyl transferase L3V65_02860 PF00474 Sodium:solute symporter family L3V65_02875 PF00171 Aldehyde dehydrogenase family L3V65_02875 PF00465 Iron-containing alcohol dehydrogenase L3V65_02880 PF00271 Helicase conserved C-terminal domain L3V65_02880 PF00270 DEAD/DEAH box helicase L3V65_02890 PF00877 NlpC/P60 family L3V65_02890 PF01476 LysM domain L3V65_02895 PF00557 Metallopeptidase family M24 L3V65_02900 PF02632 BioY family L3V65_02910 PF02522 Aminoglycoside 3-N-acetyltransferase L3V65_02915 PF01943 Polysaccharide biosynthesis protein L3V65_02920 PF00582 Universal stress protein family L3V65_02935 PF04055 Radical SAM superfamily L3V65_02935 PF08756 YfkB-like domain L3V65_02945 PF00356 Bacterial regulatory proteins, lacI family L3V65_02945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family L3V65_02950 PF01380 SIS domain L3V65_02965 PF12146 Serine aminopeptidase, S33 L3V65_02985 PF03358 NADPH-dependent FMN reductase L3V65_02995 PF00149 Calcineurin-like phosphoesterase L3V65_03000 PF13514 AAA domain L3V65_03010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3V65_03010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3V65_03015 PF01554 MatE L3V65_03025 PF07282 Putative transposase DNA-binding domain L3V65_03025 PF01385 Probable transposase L3V65_03025 PF12323 Helix-turn-helix domain L3V65_03030 PF13171 Protein of unknown function (DUF4004) L3V65_03035 PF00155 Aminotransferase class I and II L3V65_03040 PF03737 Aldolase/RraA L3V65_03045 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3V65_03045 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3V65_03050 PF00550 Phosphopantetheine attachment site L3V65_03055 PF13847 Methyltransferase domain L3V65_03055 PF01938 TRAM domain L3V65_03055 PF05958 tRNA (Uracil-5-)-methyltransferase L3V65_03060 PF01209 ubiE/COQ5 methyltransferase family L3V65_03080 PF08338 Domain of unknown function (DUF1731) L3V65_03080 PF01370 NAD dependent epimerase/dehydratase family L3V65_03085 PF03070 TENA/THI-4/PQQC family L3V65_03100 PF00005 ABC transporter L3V65_03100 PF02687 FtsX-like permease family L3V65_03100 PF12704 MacB-like periplasmic core domain L3V65_03125 PF01979 Amidohydrolase family L3V65_03140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3V65_03150 PF03611 PTS system sugar-specific permease component L3V65_03155 PF00202 Aminotransferase class-III L3V65_03160 PF00324 Amino acid permease L3V65_03165 PF07690 Major Facilitator Superfamily L3V65_03175 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) L3V65_03190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L3V65_03190 PF02770 Acyl-CoA dehydrogenase, middle domain L3V65_03190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3V65_03200 PF00288 GHMP kinases N terminal domain L3V65_03200 PF08544 GHMP kinases C terminal L3V65_03200 PF10509 Galactokinase galactose-binding signature L3V65_03205 PF16363 GDP-mannose 4,6 dehydratase L3V65_03210 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3V65_03210 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3V65_03215 PF01263 Aldose 1-epimerase L3V65_03220 PF00356 Bacterial regulatory proteins, lacI family L3V65_03240 PF13509 S1 domain L3V65_03240 PF17783 CvfB-like winged helix domain L3V65_03245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3V65_03250 PF01238 Phosphomannose isomerase type I L3V65_03255 PF04204 Homoserine O-succinyltransferase L3V65_03260 PF07690 Major Facilitator Superfamily L3V65_03265 PF01979 Amidohydrolase family L3V65_03270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L3V65_03275 PF07702 UTRA domain L3V65_03275 PF00392 Bacterial regulatory proteins, gntR family L3V65_03280 PF00877 NlpC/P60 family L3V65_03280 PF01476 LysM domain L3V65_03285 PF08447 PAS fold L3V65_03285 PF13426 PAS domain L3V65_03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_03290 PF05223 NTF2-like N-terminal transpeptidase domain L3V65_03290 PF03717 Penicillin-binding Protein dimerisation domain L3V65_03290 PF00905 Penicillin binding protein transpeptidase domain L3V65_03295 PF00953 Glycosyl transferase family 4 L3V65_03300 PF01205 Uncharacterized protein family UPF0029 L3V65_03300 PF09186 Domain of unknown function (DUF1949) L3V65_03305 PF07730 Histidine kinase L3V65_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_03305 PF05384 Sensor protein DegS L3V65_03310 PF00072 Response regulator receiver domain L3V65_03310 PF00196 Bacterial regulatory proteins, luxR family L3V65_03315 PF13520 Amino acid permease L3V65_03320 PF02645 Uncharacterised protein, DegV family COG1307 L3V65_03325 PF00271 Helicase conserved C-terminal domain L3V65_03325 PF04851 Type III restriction enzyme, res subunit L3V65_03330 PF00156 Phosphoribosyl transferase domain L3V65_03350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3V65_03350 PF00460 Flagella basal body rod protein L3V65_03355 PF00700 Bacterial flagellin C-terminal helical region L3V65_03355 PF00669 Bacterial flagellin N-terminal helical region L3V65_03360 PF02623 FliW protein L3V65_03365 PF02599 Global regulator protein family L3V65_03370 PF00669 Bacterial flagellin N-terminal helical region L3V65_03370 PF00700 Bacterial flagellin C-terminal helical region L3V65_03375 PF13181 Tetratricopeptide repeat L3V65_03375 PF00535 Glycosyl transferase family 2 L3V65_03395 PF05362 Lon protease (S16) C-terminal proteolytic domain L3V65_03395 PF13654 AAA domain L3V65_03420 PF05362 Lon protease (S16) C-terminal proteolytic domain L3V65_03420 PF13654 AAA domain L3V65_03435 PF02245 Methylpurine-DNA glycosylase (MPG) L3V65_03445 PF03646 FlaG protein L3V65_03450 PF02465 Flagellar hook-associated protein 2 N-terminus L3V65_03450 PF07195 Flagellar hook-associated protein 2 C-terminus L3V65_03455 PF02561 Flagellar protein FliS L3V65_03465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L3V65_03465 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L3V65_03480 PF01043 SecA preprotein cross-linking domain L3V65_03480 PF07516 SecA Wing and Scaffold domain L3V65_03480 PF02810 SEC-C motif L3V65_03480 PF07517 SecA DEAD-like domain L3V65_03490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3V65_03490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L3V65_03495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L3V65_03500 PF01348 Type II intron maturase L3V65_03500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L3V65_03525 PF00005 ABC transporter L3V65_03525 PF02687 FtsX-like permease family L3V65_03525 PF12704 MacB-like periplasmic core domain L3V65_03530 PF00005 ABC transporter L3V65_03535 PF18075 FtsX extracellular domain L3V65_03535 PF02687 FtsX-like permease family L3V65_03540 PF04225 Opacity-associated protein A LysM-like domain L3V65_03540 PF01551 Peptidase family M23 L3V65_03545 PF13091 PLD-like domain L3V65_03545 PF13396 Phospholipase_D-nuclease N-terminal L3V65_03550 PF01053 Cys/Met metabolism PLP-dependent enzyme L3V65_03555 PF00742 Homoserine dehydrogenase L3V65_03555 PF03447 Homoserine dehydrogenase, NAD binding domain L3V65_03555 PF01842 ACT domain L3V65_03560 PF17820 PDZ domain L3V65_03560 PF03572 Peptidase family S41 L3V65_03560 PF01471 Putative peptidoglycan binding domain L3V65_03565 PF17820 PDZ domain L3V65_03570 PF01032 FecCD transport family L3V65_03575 PF01032 FecCD transport family L3V65_03580 PF00005 ABC transporter L3V65_03585 PF01497 Periplasmic binding protein L3V65_03590 PF00037 4Fe-4S binding domain L3V65_03605 PF00072 Response regulator receiver domain L3V65_03605 PF00486 Transcriptional regulatory protein, C terminal L3V65_03610 PF00989 PAS fold L3V65_03610 PF00512 His Kinase A (phospho-acceptor) domain L3V65_03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_03610 PF16736 Single Cache-like L3V65_03615 PF01593 Flavin containing amine oxidoreductase L3V65_03620 PF12849 PBP superfamily domain L3V65_03625 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_03630 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_03635 PF00005 ABC transporter L3V65_03640 PF00005 ABC transporter L3V65_03645 PF00535 Glycosyl transferase family 2 L3V65_03680 PF00271 Helicase conserved C-terminal domain L3V65_03680 PF04851 Type III restriction enzyme, res subunit L3V65_03680 PF12344 Ultra-violet resistance protein B L3V65_03680 PF17757 UvrB interaction domain L3V65_03680 PF02151 UvrB/uvrC motif L3V65_03685 PF00005 ABC transporter L3V65_03685 PF17755 UvrA DNA-binding domain L3V65_03685 PF17760 UvrA interaction domain L3V65_03695 PF01467 Cytidylyltransferase-like L3V65_03700 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L3V65_03705 PF00535 Glycosyl transferase family 2 L3V65_03715 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L3V65_03720 PF00535 Glycosyl transferase family 2 L3V65_03720 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L3V65_03725 PF01061 ABC-2 type transporter L3V65_03740 PF13349 Putative adhesin L3V65_03750 PF02603 HPr Serine kinase N terminus L3V65_03750 PF07475 HPr Serine kinase C-terminal domain L3V65_03755 PF01790 Prolipoprotein diacylglyceryl transferase L3V65_03760 PF13419 Haloacid dehalogenase-like hydrolase L3V65_03765 PF14602 Hexapeptide repeat of succinyl-transferase L3V65_03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_03785 PF00293 NUDIX domain L3V65_03790 PF03668 P-loop ATPase protein family L3V65_03795 PF01933 Uncharacterised protein family UPF0052 L3V65_03800 PF02650 WhiA C-terminal HTH domain L3V65_03800 PF14527 WhiA LAGLIDADG-like domain L3V65_03800 PF10298 WhiA N-terminal LAGLIDADG-like domain L3V65_03805 PF00381 PTS HPr component phosphorylation site L3V65_03830 PF10415 Fumarase C C-terminus L3V65_03830 PF00206 Lyase L3V65_03835 PF00269 Small, acid-soluble spore proteins, alpha/beta type L3V65_03840 PF00005 ABC transporter L3V65_03840 PF17912 MalK OB fold domain L3V65_03840 PF03459 TOBE domain L3V65_03845 PF13556 PucR C-terminal helix-turn-helix domain L3V65_03855 PF14398 YheC/D like ATP-grasp L3V65_03860 PF14398 YheC/D like ATP-grasp L3V65_03870 PF04286 Protein of unknown function (DUF445) L3V65_03875 PF06133 Control of competence regulator ComK, YlbF/YmcA L3V65_03885 PF00378 Enoyl-CoA hydratase/isomerase L3V65_03895 PF03741 Integral membrane protein TerC family L3V65_03900 PF03773 Predicted permease L3V65_03905 PF09323 Domain of unknown function (DUF1980) L3V65_03910 PF00149 Calcineurin-like phosphoesterase L3V65_03915 PF13514 AAA domain L3V65_03920 PF01966 HD domain L3V65_03925 PF14147 Sporulation protein YhaL L3V65_03930 PF05698 Bacterial trigger factor protein (TF) C-terminus L3V65_03940 PF08963 Protein of unknown function (DUF1878) L3V65_03945 PF01047 MarR family L3V65_03960 PF17099 Tryptophan transporter TrpP L3V65_03965 PF01230 HIT domain L3V65_03970 PF00005 ABC transporter L3V65_03975 PF05975 Bacterial ABC transporter protein EcsB L3V65_03980 PF01546 Peptidase family M20/M25/M40 L3V65_03980 PF07687 Peptidase dimerisation domain L3V65_03990 PF03992 Antibiotic biosynthesis monooxygenase L3V65_03995 PF01208 Uroporphyrinogen decarboxylase (URO-D) L3V65_04000 PF00762 Ferrochelatase L3V65_04005 PF01593 Flavin containing amine oxidoreductase L3V65_04010 PF00440 Bacterial regulatory proteins, tetR family L3V65_04010 PF17932 Tetracyclin repressor-like, C-terminal domain L3V65_04025 PF00892 EamA-like transporter family L3V65_04035 PF02630 SCO1/SenC L3V65_04045 PF14149 YhfH-like protein L3V65_04050 PF03099 Biotin/lipoate A/B protein ligase family L3V65_04050 PF10437 Bacterial lipoate protein ligase C-terminus L3V65_04065 PF03591 AzlC protein L3V65_04075 PF01435 Peptidase family M48 L3V65_04075 PF16491 CAAX prenyl protease N-terminal, five membrane helices L3V65_04085 PF06338 ComK protein L3V65_04095 PF12705 PD-(D/E)XK nuclease superfamily L3V65_04100 PF12705 PD-(D/E)XK nuclease superfamily L3V65_04100 PF00580 UvrD/REP helicase N-terminal domain L3V65_04100 PF13361 UvrD-like helicase C-terminal domain L3V65_04105 PF10676 Spore germination protein gerPA/gerPF L3V65_04110 PF10970 Spore germination protein GerPE L3V65_04120 PF10737 Spore germination protein GerPC L3V65_04130 PF10676 Spore germination protein gerPA/gerPF L3V65_04135 PF04235 Protein of unknown function (DUF418) L3V65_04140 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3V65_04145 PF07457 Protein of unknown function (DUF1516) L3V65_04155 PF02645 Uncharacterised protein, DegV family COG1307 L3V65_04165 PF12758 Protein of unknown function (DUF3813) L3V65_04175 PF01883 Iron-sulfur cluster assembly protein L3V65_04180 PF14168 YjzC-like protein L3V65_04185 PF02861 Clp amino terminal domain, pathogenicity island component L3V65_04185 PF17871 AAA lid domain L3V65_04185 PF07724 AAA domain (Cdc48 subfamily) L3V65_04185 PF10431 C-terminal, D2-small domain, of ClpB protein L3V65_04185 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_04205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L3V65_04205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L3V65_04210 PF00109 Beta-ketoacyl synthase, N-terminal domain L3V65_04210 PF02801 Beta-ketoacyl synthase, C-terminal domain L3V65_04220 PF00005 ABC transporter L3V65_04220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_04225 PF00005 ABC transporter L3V65_04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_04230 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_04235 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3V65_04245 PF12227 Protein of unknown function (DUF3603) L3V65_04250 PF00579 tRNA synthetases class I (W and Y) L3V65_04265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3V65_04270 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_04275 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_04275 PF12911 N-terminal TM domain of oligopeptide transport permease C L3V65_04280 PF00005 ABC transporter L3V65_04280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_04285 PF00005 ABC transporter L3V65_04285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_04290 PF03960 ArsC family L3V65_04295 PF05389 Negative regulator of genetic competence (MecA) L3V65_04300 PF06054 Competence protein CoiA-like family L3V65_04305 PF01432 Peptidase family M3 L3V65_04305 PF08439 Oligopeptidase F L3V65_04320 PF01152 Bacterial-like globin L3V65_04325 PF01464 Transglycosylase SLT domain L3V65_04330 PF01928 CYTH domain L3V65_04340 PF04607 Region found in RelA / SpoT proteins L3V65_04345 PF01513 ATP-NAD kinase L3V65_04350 PF00849 RNA pseudouridylate synthase L3V65_04355 PF00149 Calcineurin-like phosphoesterase L3V65_04380 PF07098 Protein of unknown function (DUF1360) L3V65_04395 PF07451 Stage V sporulation protein AD (SpoVAD) L3V65_04400 PF03862 SpoVAC/SpoVAEB sporulation membrane protein L3V65_04410 PF14069 Stage VI sporulation protein F L3V65_04420 PF13673 Acetyltransferase (GNAT) domain L3V65_04430 PF00756 Putative esterase L3V65_04445 PF00480 ROK family L3V65_04450 PF00005 ABC transporter L3V65_04450 PF13732 Domain of unknown function (DUF4162) L3V65_04465 PF03051 Peptidase C1-like family L3V65_04470 PF01432 Peptidase family M3 L3V65_04470 PF08439 Oligopeptidase F L3V65_04475 PF03698 Uncharacterised protein family (UPF0180) L3V65_04490 PF02417 Chromate transporter L3V65_04495 PF02417 Chromate transporter L3V65_04500 PF01037 Lrp/AsnC ligand binding domain L3V65_04500 PF13404 AsnC-type helix-turn-helix domain L3V65_04520 PF12833 Helix-turn-helix domain L3V65_04520 PF10114 Sensory domain found in PocR L3V65_04545 PF00871 Acetokinase family L3V65_04550 PF01717 Cobalamin-independent synthase, Catalytic domain L3V65_04560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3V65_04560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3V65_04570 PF07690 Major Facilitator Superfamily L3V65_04580 PF02082 Transcriptional regulator L3V65_04585 PF00175 Oxidoreductase NAD-binding domain L3V65_04585 PF00970 Oxidoreductase FAD-binding domain L3V65_04585 PF00042 Globin L3V65_04595 PF01925 Sulfite exporter TauE/SafE L3V65_04600 PF00210 Ferritin-like domain L3V65_04605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3V65_04605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3V65_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_04610 PF00512 His Kinase A (phospho-acceptor) domain L3V65_04610 PF00989 PAS fold L3V65_04615 PF00009 Elongation factor Tu GTP binding domain L3V65_04615 PF03144 Elongation factor Tu domain 2 L3V65_04615 PF16658 Class II release factor RF3, C-terminal domain L3V65_04625 PF03741 Integral membrane protein TerC family L3V65_04630 PF00269 Small, acid-soluble spore proteins, alpha/beta type L3V65_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_04645 PF13188 PAS domain L3V65_04645 PF13426 PAS domain L3V65_04645 PF00989 PAS fold L3V65_04645 PF00512 His Kinase A (phospho-acceptor) domain L3V65_04650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L3V65_04650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L3V65_04660 PF09388 Spo0E like sporulation regulatory protein L3V65_04665 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_04665 PF07724 AAA domain (Cdc48 subfamily) L3V65_04665 PF17871 AAA lid domain L3V65_04665 PF10431 C-terminal, D2-small domain, of ClpB protein L3V65_04690 PF00381 PTS HPr component phosphorylation site L3V65_04695 PF05524 PEP-utilising enzyme, N-terminal L3V65_04695 PF00391 PEP-utilising enzyme, mobile domain L3V65_04695 PF02896 PEP-utilising enzyme, TIM barrel domain L3V65_04705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3V65_04705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L3V65_04710 PF00155 Aminotransferase class I and II L3V65_04715 PF01584 CheW-like domain L3V65_04715 PF00072 Response regulator receiver domain L3V65_04720 PF14177 YkyB-like protein L3V65_04725 PF03176 MMPL family L3V65_04730 PF00563 EAL domain L3V65_04730 PF00990 Diguanylate cyclase, GGDEF domain L3V65_04730 PF03707 Bacterial signalling protein N terminal repeat L3V65_04745 PF03069 Acetamidase/Formamidase family L3V65_04750 PF08796 Protein of unknown function (DUF1797) L3V65_04760 PF03466 LysR substrate binding domain L3V65_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_04765 PF14602 Hexapeptide repeat of succinyl-transferase L3V65_04765 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal L3V65_04765 PF00132 Bacterial transferase hexapeptide (six repeats) L3V65_04770 PF07687 Peptidase dimerisation domain L3V65_04770 PF01546 Peptidase family M20/M25/M40 L3V65_04780 PF17770 Ribonuclease J C-terminal domain L3V65_04780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3V65_04780 PF00753 Metallo-beta-lactamase superfamily L3V65_04785 PF07288 Protein of unknown function (DUF1447) L3V65_04790 PF00676 Dehydrogenase E1 component L3V65_04795 PF02780 Transketolase, C-terminal domain L3V65_04795 PF02779 Transketolase, pyrimidine binding domain L3V65_04800 PF02817 e3 binding domain L3V65_04800 PF00364 Biotin-requiring enzyme L3V65_04800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3V65_04805 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_04805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3V65_04820 PF01276 Orn/Lys/Arg decarboxylase, major domain L3V65_04820 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L3V65_04825 PF05256 Uncharacterised protein family (UPF0223) L3V65_04830 PF06335 Protein of unknown function (DUF1054) L3V65_04840 PF00459 Inositol monophosphatase family L3V65_04850 PF03144 Elongation factor Tu domain 2 L3V65_04850 PF00009 Elongation factor Tu GTP binding domain L3V65_04850 PF14492 Elongation Factor G, domain II L3V65_04850 PF00679 Elongation factor G C-terminus L3V65_04855 PF14036 YlaH-like protein L3V65_04860 PF02562 PhoH-like protein L3V65_04860 PF13638 PIN domain L3V65_04880 PF07408 Protein of unknown function (DUF1507) L3V65_04885 PF01098 Cell cycle protein L3V65_04890 PF02628 Cytochrome oxidase assembly protein L3V65_04895 PF01040 UbiA prenyltransferase family L3V65_04900 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L3V65_04900 PF00034 Cytochrome c L3V65_04900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L3V65_04910 PF00510 Cytochrome c oxidase subunit III L3V65_04915 PF03626 Prokaryotic Cytochrome C oxidase subunit IV L3V65_04920 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) L3V65_04925 PF08868 YugN-like family L3V65_04930 PF14504 CAP-associated N-terminal L3V65_04930 PF00188 Cysteine-rich secretory protein family L3V65_04945 PF14003 YlbE-like protein L3V65_04955 PF06133 Control of competence regulator ComK, YlbF/YmcA L3V65_04960 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) L3V65_04975 PF01467 Cytidylyltransferase-like L3V65_04980 PF07670 Nucleoside recognition L3V65_04985 PF01734 Patatin-like phospholipase L3V65_04990 PF05362 Lon protease (S16) C-terminal proteolytic domain L3V65_04990 PF13180 PDZ domain L3V65_04995 PF05636 HIGH Nucleotidyl Transferase L3V65_05000 PF02620 Large ribosomal RNA subunit accumulation protein YceD L3V65_05005 PF01783 Ribosomal L32p protein family L3V65_05015 PF13508 Acetyltransferase (GNAT) domain L3V65_05020 PF02558 Ketopantoate reductase PanE/ApbA L3V65_05020 PF08546 Ketopantoate reductase PanE/ApbA C terminal L3V65_05025 PF10079 Bacillithiol biosynthesis BshC L3V65_05030 PF02381 MraZ protein, putative antitoxin-like L3V65_05035 PF01795 MraW methylase family L3V65_05040 PF04977 Septum formation initiator L3V65_05045 PF00905 Penicillin binding protein transpeptidase domain L3V65_05045 PF03793 PASTA domain L3V65_05045 PF03717 Penicillin-binding Protein dimerisation domain L3V65_05050 PF03793 PASTA domain L3V65_05050 PF03717 Penicillin-binding Protein dimerisation domain L3V65_05050 PF00905 Penicillin binding protein transpeptidase domain L3V65_05055 PF01225 Mur ligase family, catalytic domain L3V65_05055 PF02875 Mur ligase family, glutamate ligase domain L3V65_05055 PF08245 Mur ligase middle domain L3V65_05065 PF00953 Glycosyl transferase family 4 L3V65_05065 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L3V65_05070 PF02875 Mur ligase family, glutamate ligase domain L3V65_05070 PF08245 Mur ligase middle domain L3V65_05075 PF01098 Cell cycle protein L3V65_05080 PF04101 Glycosyltransferase family 28 C-terminal domain L3V65_05080 PF03033 Glycosyltransferase family 28 N-terminal domain L3V65_05085 PF08478 POTRA domain, FtsQ-type L3V65_05090 PF02491 SHS2 domain inserted in FTSA L3V65_05095 PF00091 Tubulin/FtsZ family, GTPase domain L3V65_05095 PF12327 FtsZ family, C-terminal domain L3V65_05100 PF03419 Sporulation factor SpoIIGA L3V65_05105 PF04542 Sigma-70 region 2 L3V65_05105 PF04545 Sigma-70, region 4 L3V65_05110 PF04542 Sigma-70 region 2 L3V65_05110 PF04539 Sigma-70 region 3 L3V65_05110 PF04545 Sigma-70, region 4 L3V65_05115 PF05239 PRC-barrel domain L3V65_05120 PF06725 3D domain L3V65_05120 PF01476 LysM domain L3V65_05125 PF02578 Multi-copper polyphenol oxidoreductase laccase L3V65_05130 PF01168 Alanine racemase, N-terminal domain L3V65_05135 PF04472 Cell division protein SepF L3V65_05140 PF02325 YGGT family L3V65_05145 PF17774 Putative RNA-binding domain in YlmH L3V65_05145 PF01479 S4 domain L3V65_05150 PF05103 DivIVA protein L3V65_05155 PF08264 Anticodon-binding domain of tRNA L3V65_05155 PF06827 Zinc finger found in FPG and IleRS L3V65_05155 PF00133 tRNA synthetases class I (I, L, M and V) L3V65_05170 PF01479 S4 domain L3V65_05170 PF00849 RNA pseudouridylate synthase L3V65_05175 PF00156 Phosphoribosyl transferase domain L3V65_05180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3V65_05180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3V65_05185 PF01979 Amidohydrolase family L3V65_05190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L3V65_05190 PF00117 Glutamine amidotransferase class-I L3V65_05195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3V65_05195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L3V65_05195 PF02142 MGS-like domain L3V65_05200 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L3V65_05200 PF00970 Oxidoreductase FAD-binding domain L3V65_05205 PF01180 Dihydroorotate dehydrogenase L3V65_05210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L3V65_05215 PF00156 Phosphoribosyl transferase domain L3V65_05235 PF02142 MGS-like domain L3V65_05240 PF01812 5-formyltetrahydrofolate cyclo-ligase family L3V65_05245 PF07690 Major Facilitator Superfamily L3V65_05250 PF07690 Major Facilitator Superfamily L3V65_05255 PF01594 AI-2E family transporter L3V65_05275 PF01242 6-pyruvoyl tetrahydropterin synthase L3V65_05280 PF04055 Radical SAM superfamily L3V65_05285 PF01758 Sodium Bile acid symporter family L3V65_05290 PF05670 NFACT protein RNA binding domain L3V65_05295 PF00690 Cation transporter/ATPase, N-terminus L3V65_05295 PF00689 Cation transporting ATPase, C-terminus L3V65_05300 PF08340 Domain of unknown function (DUF1732) L3V65_05300 PF03755 YicC-like family, N-terminal region L3V65_05305 PF04025 Domain of unknown function (DUF370) L3V65_05310 PF00625 Guanylate kinase L3V65_05315 PF01192 RNA polymerase Rpb6 L3V65_05320 PF04127 DNA / pantothenate metabolism flavoprotein L3V65_05320 PF02441 Flavoprotein L3V65_05325 PF17764 3′ DNA-binding domain (3′BD) L3V65_05325 PF18074 Primosomal protein N C-terminal domain L3V65_05325 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L3V65_05325 PF04851 Type III restriction enzyme, res subunit L3V65_05325 PF00271 Helicase conserved C-terminal domain L3V65_05330 PF01327 Polypeptide deformylase L3V65_05335 PF00551 Formyl transferase L3V65_05335 PF02911 Formyl transferase, C-terminal domain L3V65_05350 PF03793 PASTA domain L3V65_05350 PF00069 Protein kinase domain L3V65_05355 PF03193 RsgA GTPase L3V65_05355 PF16745 RsgA N-terminal domain L3V65_05360 PF00834 Ribulose-phosphate 3 epimerase family L3V65_05365 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain L3V65_05365 PF04263 Thiamin pyrophosphokinase, catalytic domain L3V65_05370 PF08183 Stage V sporulation protein family L3V65_05375 PF00830 Ribosomal L28 family L3V65_05380 PF03780 Asp23 family, cell envelope-related function L3V65_05385 PF13684 Dihydroxyacetone kinase family L3V65_05385 PF02734 DAK2 domain L3V65_05390 PF01842 ACT domain L3V65_05390 PF03315 Serine dehydratase beta chain L3V65_05395 PF03313 Serine dehydratase alpha chain L3V65_05400 PF17191 RecG wedge domain L3V65_05400 PF00271 Helicase conserved C-terminal domain L3V65_05400 PF00270 DEAD/DEAH box helicase L3V65_05405 PF01575 MaoC like domain L3V65_05405 PF08279 HTH domain L3V65_05410 PF02504 Fatty acid synthesis protein L3V65_05415 PF00698 Acyl transferase domain L3V65_05425 PF00550 Phosphopantetheine attachment site L3V65_05430 PF14622 Ribonuclease-III-like L3V65_05430 PF00035 Double-stranded RNA binding motif L3V65_05435 PF06470 SMC proteins Flexible Hinge Domain L3V65_05435 PF02463 RecF/RecN/SMC N terminal domain L3V65_05440 PF00448 SRP54-type protein, GTPase domain L3V65_05440 PF02881 SRP54-type protein, helical bundle domain L3V65_05445 PF04297 Putative helix-turn-helix protein, YlxM / p13 like L3V65_05450 PF00448 SRP54-type protein, GTPase domain L3V65_05450 PF02978 Signal peptide binding domain L3V65_05450 PF02881 SRP54-type protein, helical bundle domain L3V65_05455 PF00886 Ribosomal protein S16 L3V65_05465 PF11068 YlqD protein L3V65_05470 PF05239 PRC-barrel domain L3V65_05470 PF01782 RimM N-terminal domain L3V65_05475 PF01746 tRNA (Guanine-1)-methyltransferase L3V65_05480 PF01245 Ribosomal protein L19 L3V65_05485 PF10502 Signal peptidase, peptidase S26 L3V65_05490 PF01926 50S ribosome-binding GTPase L3V65_05495 PF01351 Ribonuclease HII L3V65_05505 PF01312 FlhB HrpN YscU SpaS Family L3V65_05510 PF08442 ATP-grasp domain L3V65_05510 PF00549 CoA-ligase L3V65_05515 PF02629 CoA binding domain L3V65_05515 PF00549 CoA-ligase L3V65_05520 PF02481 DNA recombination-mediator protein A L3V65_05525 PF01131 DNA topoisomerase L3V65_05525 PF01751 Toprim domain L3V65_05525 PF01396 Topoisomerase DNA binding C4 zinc finger L3V65_05535 PF00227 Proteasome subunit L3V65_05540 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_05540 PF07724 AAA domain (Cdc48 subfamily) L3V65_05540 PF10431 C-terminal, D2-small domain, of ClpB protein L3V65_05545 PF06018 CodY GAF-like domain L3V65_05545 PF08222 CodY helix-turn-helix domain L3V65_05550 PF00460 Flagella basal body rod protein L3V65_05555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3V65_05555 PF00460 Flagella basal body rod protein L3V65_05560 PF02049 Flagellar hook-basal body complex protein FliE L3V65_05565 PF01514 Secretory protein of YscJ/FliF family L3V65_05565 PF08345 Flagellar M-ring protein C-terminal L3V65_05570 PF14841 FliG middle domain L3V65_05570 PF14842 FliG N-terminal domain L3V65_05570 PF01706 FliG C-terminal domain L3V65_05575 PF02108 Flagellar assembly protein FliH L3V65_05580 PF18269 T3SS EscN ATPase C-terminal domain L3V65_05580 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3V65_05580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3V65_05585 PF02050 Flagellar FliJ protein L3V65_05600 PF03963 Flagellar hook capping protein - N-terminal region L3V65_05610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3V65_05610 PF00460 Flagella basal body rod protein L3V65_05620 PF03748 Flagellar basal body-associated protein FliL L3V65_05625 PF02154 Flagellar motor switch protein FliM L3V65_05625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L3V65_05630 PF04509 CheC-like family L3V65_05630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L3V65_05635 PF00072 Response regulator receiver domain L3V65_05640 PF04347 Flagellar biosynthesis protein, FliO L3V65_05645 PF00813 FliP family L3V65_05650 PF01313 Bacterial export proteins, family 3 L3V65_05655 PF01311 Bacterial export proteins, family 1 L3V65_05660 PF01312 FlhB HrpN YscU SpaS Family L3V65_05665 PF00771 FHIPEP family L3V65_05670 PF00448 SRP54-type protein, GTPase domain L3V65_05675 PF10609 NUBPL iron-transfer P-loop NTPase L3V65_05680 PF01339 CheB methylesterase L3V65_05680 PF00072 Response regulator receiver domain L3V65_05685 PF01584 CheW-like domain L3V65_05685 PF02895 Signal transducing histidine kinase, homodimeric domain L3V65_05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_05685 PF01627 Hpt domain L3V65_05685 PF07194 P2 response regulator binding domain L3V65_05690 PF01584 CheW-like domain L3V65_05695 PF04509 CheC-like family L3V65_05705 PF04539 Sigma-70 region 3 L3V65_05705 PF04545 Sigma-70, region 4 L3V65_05705 PF04542 Sigma-70 region 2 L3V65_05715 PF00318 Ribosomal protein S2 L3V65_05720 PF00889 Elongation factor TS L3V65_05725 PF00696 Amino acid kinase family L3V65_05730 PF01765 Ribosome recycling factor L3V65_05735 PF01255 Putative undecaprenyl diphosphate synthase L3V65_05745 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L3V65_05745 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L3V65_05745 PF13288 DXP reductoisomerase C-terminal domain L3V65_05750 PF13180 PDZ domain L3V65_05750 PF02163 Peptidase family M50 L3V65_05755 PF03129 Anticodon binding domain L3V65_05755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3V65_05755 PF04073 Aminoacyl-tRNA editing domain L3V65_05760 PF14480 DNA polymerase III polC-type N-terminus I L3V65_05760 PF11490 DNA polymerase III polC-type N-terminus II L3V65_05760 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3V65_05760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3V65_05760 PF14579 Helix-hairpin-helix motif L3V65_05760 PF02811 PHP domain L3V65_05760 PF00929 Exonuclease L3V65_05765 PF02576 RimP N-terminal domain L3V65_05765 PF17384 RimP C-terminal SH3 domain L3V65_05770 PF08529 NusA N-terminal domain L3V65_05770 PF00575 S1 RNA binding domain L3V65_05770 PF13184 NusA-like KH domain L3V65_05775 PF04296 Protein of unknown function (DUF448) L3V65_05780 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L3V65_05785 PF11987 Translation-initiation factor 2 L3V65_05785 PF04760 Translation initiation factor IF-2, N-terminal region L3V65_05785 PF00009 Elongation factor Tu GTP binding domain L3V65_05790 PF04456 Protein of unknown function (DUF503) L3V65_05795 PF02033 Ribosome-binding factor A L3V65_05800 PF16198 tRNA pseudouridylate synthase B C-terminal domain L3V65_05800 PF01509 TruB family pseudouridylate synthase (N terminal domain) L3V65_05805 PF06574 FAD synthetase L3V65_05805 PF01687 Riboflavin kinase L3V65_05810 PF00312 Ribosomal protein S15 L3V65_05815 PF00013 KH domain L3V65_05815 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L3V65_05815 PF01138 3' exoribonuclease family, domain 1 L3V65_05815 PF03725 3' exoribonuclease family, domain 2 L3V65_05815 PF00575 S1 RNA binding domain L3V65_05820 PF01522 Polysaccharide deacetylase L3V65_05825 PF05193 Peptidase M16 inactive domain L3V65_05825 PF00675 Insulinase (Peptidase family M16) L3V65_05830 PF05239 PRC-barrel domain L3V65_05835 PF16924 Dipicolinate synthase subunit A N-terminal domain L3V65_05835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3V65_05840 PF02441 Flavoprotein L3V65_05845 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3V65_05845 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3V65_05850 PF13840 ACT domain L3V65_05850 PF00696 Amino acid kinase family L3V65_05855 PF00701 Dihydrodipicolinate synthetase family L3V65_05860 PF00753 Metallo-beta-lactamase superfamily L3V65_05860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3V65_05860 PF17770 Ribonuclease J C-terminal domain L3V65_05870 PF14035 YlzJ-like protein L3V65_05880 PF02608 ABC transporter substrate-binding protein PnrA-like L3V65_05885 PF00005 ABC transporter L3V65_05890 PF02653 Branched-chain amino acid transport system / permease component L3V65_05895 PF02653 Branched-chain amino acid transport system / permease component L3V65_05900 PF05193 Peptidase M16 inactive domain L3V65_05905 PF00675 Insulinase (Peptidase family M16) L3V65_05905 PF05193 Peptidase M16 inactive domain L3V65_05915 PF11588 Protein of unknown function (DUF3243) L3V65_05920 PF11868 Protein of unknown function (DUF3388) L3V65_05925 PF13464 Domain of unknown function (DUF4115) L3V65_05935 PF01066 CDP-alcohol phosphatidyltransferase L3V65_05940 PF18146 Damage-inducible protein CinA KH domain L3V65_05940 PF02464 Competence-damaged protein L3V65_05940 PF00994 Probable molybdopterin binding domain L3V65_05945 PF00154 recA bacterial DNA recombination protein L3V65_05950 PF12072 Domain of unknown function (DUF3552) L3V65_05950 PF01966 HD domain L3V65_05950 PF00013 KH domain L3V65_05955 PF13277 YmdB-like protein L3V65_05960 PF04232 Stage V sporulation protein S (SpoVS) L3V65_05965 PF01136 Peptidase family U32 L3V65_05970 PF01136 Peptidase family U32 L3V65_05970 PF16325 Peptidase family U32 C-terminal domain L3V65_05980 PF00324 Amino acid permease L3V65_05985 PF00919 Uncharacterized protein family UPF0004 L3V65_05985 PF01938 TRAM domain L3V65_05985 PF04055 Radical SAM superfamily L3V65_05990 PF06133 Control of competence regulator ComK, YlbF/YmcA L3V65_05995 PF10628 Outer spore coat protein E (CotE) L3V65_06000 PF01624 MutS domain I L3V65_06000 PF05188 MutS domain II L3V65_06000 PF05192 MutS domain III L3V65_06000 PF05190 MutS family domain IV L3V65_06000 PF00488 MutS domain V L3V65_06005 PF08676 MutL C terminal dimerisation domain L3V65_06005 PF01119 DNA mismatch repair protein, C-terminal domain L3V65_06025 PF17209 Hfq protein L3V65_06030 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_06030 PF17866 AAA lid domain L3V65_06035 PF16360 GTP-binding GTPase Middle Region L3V65_06035 PF13167 GTP-binding GTPase N-terminal L3V65_06035 PF01926 50S ribosome-binding GTPase L3V65_06040 PF06838 Methionine gamma-lyase L3V65_06045 PF01367 5'-3' exonuclease, C-terminal SAM fold L3V65_06045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3V65_06065 PF00313 'Cold-shock' DNA-binding domain L3V65_06070 PF02742 Iron dependent repressor, metal binding and dimerisation domain L3V65_06070 PF01325 Iron dependent repressor, N-terminal DNA binding domain L3V65_06075 PF01268 Formate--tetrahydrofolate ligase L3V65_06085 PF00005 ABC transporter L3V65_06085 PF16326 ABC transporter C-terminal domain L3V65_06085 PF12848 ABC transporter L3V65_06090 PF08712 Scaffold protein Nfu/NifU N terminal L3V65_06090 PF13769 Virulence factor L3V65_06095 PF06491 Disulphide isomerase L3V65_06100 PF14005 YpjP-like protein L3V65_06105 PF00303 Thymidylate synthase L3V65_06110 PF00186 Dihydrofolate reductase L3V65_06115 PF03006 Haemolysin-III related L3V65_06120 PF13472 GDSL-like Lipase/Acylhydrolase family L3V65_06130 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF L3V65_06130 PF17126 RsmF rRNA methyltransferase first C-terminal domain L3V65_06130 PF01189 16S rRNA methyltransferase RsmB/F L3V65_06135 PF01625 Peptide methionine sulfoxide reductase L3V65_06140 PF01641 SelR domain L3V65_06150 PF02743 Cache domain L3V65_06150 PF00672 HAMP domain L3V65_06150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_06155 PF06855 YozE SAM-like fold L3V65_06165 PF14162 YozD-like protein L3V65_06170 PF02557 D-alanyl-D-alanine carboxypeptidase L3V65_06175 PF03572 Peptidase family S41 L3V65_06175 PF17820 PDZ domain L3V65_06175 PF01471 Putative peptidoglycan binding domain L3V65_06180 PF01047 MarR family L3V65_06185 PF00188 Cysteine-rich secretory protein family L3V65_06190 PF01554 MatE L3V65_06200 PF01678 Diaminopimelate epimerase L3V65_06205 PF01068 ATP dependent DNA ligase domain L3V65_06210 PF02735 Ku70/Ku80 beta-barrel domain L3V65_06215 PF01569 PAP2 superfamily L3V65_06220 PF00884 Sulfatase L3V65_06225 PF03190 Protein of unknown function, DUF255 L3V65_06230 PF07690 Major Facilitator Superfamily L3V65_06235 PF00072 Response regulator receiver domain L3V65_06235 PF00486 Transcriptional regulatory protein, C terminal L3V65_06240 PF18719 ArlS sensor domain L3V65_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_06240 PF00512 His Kinase A (phospho-acceptor) domain L3V65_06250 PF16078 2-oxoglutarate dehydrogenase N-terminus L3V65_06250 PF02779 Transketolase, pyrimidine binding domain L3V65_06250 PF00676 Dehydrogenase E1 component L3V65_06250 PF16870 2-oxoglutarate dehydrogenase C-terminal L3V65_06255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3V65_06255 PF00364 Biotin-requiring enzyme L3V65_06255 PF02817 e3 binding domain L3V65_06260 PF00171 Aldehyde dehydrogenase family L3V65_06270 PF02096 60Kd inner membrane protein L3V65_06280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3V65_06280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L3V65_06285 PF01131 DNA topoisomerase L3V65_06285 PF01751 Toprim domain L3V65_06290 PF00581 Rhodanese-like domain L3V65_06290 PF12368 Rhodanase C-terminal L3V65_06290 PF17773 UPF0176 acylphosphatase like domain L3V65_06295 PF02586 SOS response associated peptidase (SRAP) L3V65_06300 PF09515 Thiamine transporter protein (Thia_YuaJ) L3V65_06310 PF00571 CBS domain L3V65_06310 PF00478 IMP dehydrogenase / GMP reductase domain L3V65_06320 PF06725 3D domain L3V65_06320 PF01476 LysM domain L3V65_06325 PF01131 DNA topoisomerase L3V65_06325 PF01751 Toprim domain L3V65_06325 PF01396 Topoisomerase DNA binding C4 zinc finger L3V65_06325 PF13342 C-terminal repeat of topoisomerase L3V65_06335 PF01544 CorA-like Mg2+ transporter protein L3V65_06345 PF13393 Histidyl-tRNA synthetase L3V65_06350 PF01634 ATP phosphoribosyltransferase L3V65_06355 PF00815 Histidinol dehydrogenase L3V65_06360 PF00475 Imidazoleglycerol-phosphate dehydratase L3V65_06365 PF00117 Glutamine amidotransferase class-I L3V65_06370 PF00977 Histidine biosynthesis protein L3V65_06375 PF00977 Histidine biosynthesis protein L3V65_06380 PF01502 Phosphoribosyl-AMP cyclohydrolase L3V65_06380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L3V65_06390 PF04143 Sulphur transport L3V65_06395 PF00892 EamA-like transporter family L3V65_06400 PF02386 Cation transport protein L3V65_06405 PF02254 TrkA-N domain L3V65_06405 PF02080 TrkA-C domain L3V65_06410 PF08876 Domain of unknown function (DUF1836) L3V65_06425 PF07690 Major Facilitator Superfamily L3V65_06430 PF03109 ABC1 family L3V65_06440 PF01625 Peptide methionine sulfoxide reductase L3V65_06450 PF00313 'Cold-shock' DNA-binding domain L3V65_06455 PF01227 GTP cyclohydrolase I L3V65_06460 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_06460 PF13192 Thioredoxin domain L3V65_06475 PF02687 FtsX-like permease family L3V65_06480 PF00005 ABC transporter L3V65_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_06490 PF00486 Transcriptional regulatory protein, C terminal L3V65_06490 PF00072 Response regulator receiver domain L3V65_06495 PF04230 Polysaccharide pyruvyl transferase L3V65_06520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L3V65_06520 PF01348 Type II intron maturase L3V65_06525 PF07690 Major Facilitator Superfamily L3V65_06535 PF00664 ABC transporter transmembrane region L3V65_06535 PF00005 ABC transporter L3V65_06540 PF00664 ABC transporter transmembrane region L3V65_06540 PF00005 ABC transporter L3V65_06550 PF03788 LrgA family L3V65_06555 PF04172 LrgB-like family L3V65_06560 PF00501 AMP-binding enzyme L3V65_06560 PF13193 AMP-binding enzyme C-terminal domain L3V65_06575 PF08179 Small acid-soluble spore protein P family L3V65_06585 PF02073 Thermophilic metalloprotease (M29) L3V65_06595 PF00694 Aconitase C-terminal domain L3V65_06595 PF00330 Aconitase family (aconitate hydratase) L3V65_06605 PF08177 Small acid-soluble spore protein N family L3V65_06615 PF03061 Thioesterase superfamily L3V65_06625 PF01521 Iron-sulphur cluster biosynthesis L3V65_06630 PF02660 Glycerol-3-phosphate acyltransferase L3V65_06635 PF13380 CoA binding domain L3V65_06640 PF01751 Toprim domain L3V65_06640 PF00204 DNA gyrase B L3V65_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_06640 PF00986 DNA gyrase B subunit, carboxyl terminus L3V65_06645 PF03989 DNA gyrase C-terminal domain, beta-propeller L3V65_06645 PF00521 DNA gyrase/topoisomerase IV, subunit A L3V65_06660 PF03618 Kinase/pyrophosphorylase L3V65_06665 PF00391 PEP-utilising enzyme, mobile domain L3V65_06665 PF02896 PEP-utilising enzyme, TIM barrel domain L3V65_06665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L3V65_06690 PF03060 Nitronate monooxygenase L3V65_06695 PF10502 Signal peptidase, peptidase S26 L3V65_06700 PF00583 Acetyltransferase (GNAT) family L3V65_06710 PF02110 Hydroxyethylthiazole kinase family L3V65_06715 PF08543 Phosphomethylpyrimidine kinase L3V65_06720 PF02581 Thiamine monophosphate synthase L3V65_06730 PF03475 3-alpha domain L3V65_06730 PF03473 MOSC domain L3V65_06755 PF00667 FAD binding domain L3V65_06755 PF00258 Flavodoxin L3V65_06755 PF00175 Oxidoreductase NAD-binding domain L3V65_06760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L3V65_06760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L3V65_06795 PF00676 Dehydrogenase E1 component L3V65_06800 PF02779 Transketolase, pyrimidine binding domain L3V65_06800 PF02780 Transketolase, C-terminal domain L3V65_06805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3V65_06805 PF02817 e3 binding domain L3V65_06805 PF00364 Biotin-requiring enzyme L3V65_06810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3V65_06810 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_06815 PF01590 GAF domain L3V65_06815 PF02954 Bacterial regulatory protein, Fis family L3V65_06815 PF00158 Sigma-54 interaction domain L3V65_06820 PF12795 Mechanosensitive ion channel porin domain L3V65_06820 PF00924 Mechanosensitive ion channel L3V65_06820 PF12794 Mechanosensitive ion channel inner membrane domain 1 L3V65_06835 PF01661 Macro domain L3V65_06840 PF08141 Small acid-soluble spore protein H family L3V65_06845 PF00106 short chain dehydrogenase L3V65_06855 PF02334 Replication terminator protein L3V65_06865 PF04238 Protein of unknown function (DUF420) L3V65_06880 PF00056 lactate/malate dehydrogenase, NAD binding domain L3V65_06880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L3V65_06920 PF00582 Universal stress protein family L3V65_06925 PF03601 Conserved hypothetical protein 698 L3V65_06940 PF03466 LysR substrate binding domain L3V65_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_06950 PF01695 IstB-like ATP binding protein L3V65_06965 PF07690 Major Facilitator Superfamily L3V65_06970 PF07486 Cell Wall Hydrolase L3V65_06975 PF03372 Endonuclease/Exonuclease/phosphatase family L3V65_06980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L3V65_06980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3V65_06985 PF00534 Glycosyl transferases group 1 L3V65_06985 PF08323 Starch synthase catalytic domain L3V65_06995 PF00132 Bacterial transferase hexapeptide (six repeats) L3V65_06995 PF00483 Nucleotidyl transferase L3V65_07000 PF02806 Alpha amylase, C-terminal all-beta domain L3V65_07000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3V65_07000 PF00128 Alpha amylase, catalytic domain L3V65_07010 PF14139 YpzG-like protein L3V65_07020 PF00583 Acetyltransferase (GNAT) family L3V65_07025 PF00293 NUDIX domain L3V65_07030 PF01566 Natural resistance-associated macrophage protein L3V65_07035 PF00210 Ferritin-like domain L3V65_07045 PF12679 ABC-2 family transporter protein L3V65_07050 PF00005 ABC transporter L3V65_07060 PF01565 FAD binding domain L3V65_07060 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L3V65_07075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3V65_07075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L3V65_07095 PF00581 Rhodanese-like domain L3V65_07100 PF00586 AIR synthase related protein, N-terminal domain L3V65_07100 PF02769 AIR synthase related protein, C-terminal domain L3V65_07110 PF03773 Predicted permease L3V65_07115 PF00171 Aldehyde dehydrogenase family L3V65_07120 PF00696 Amino acid kinase family L3V65_07120 PF01472 PUA domain L3V65_07125 PF07849 Protein of unknown function (DUF1641) L3V65_07130 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_07140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L3V65_07145 PF13529 Peptidase_C39 like family L3V65_07150 PF13411 MerR HTH family regulatory protein L3V65_07155 PF01327 Polypeptide deformylase L3V65_07165 PF07664 Ferrous iron transport protein B C terminus L3V65_07165 PF17910 FeoB cytosolic helical domain L3V65_07165 PF02421 Ferrous iron transport protein B L3V65_07165 PF07670 Nucleoside recognition L3V65_07175 PF00155 Aminotransferase class I and II L3V65_07180 PF14698 Argininosuccinate lyase C-terminal L3V65_07180 PF00206 Lyase L3V65_07185 PF00764 Arginosuccinate synthase L3V65_07190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3V65_07190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3V65_07195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3V65_07195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L3V65_07195 PF02142 MGS-like domain L3V65_07200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L3V65_07200 PF00117 Glutamine amidotransferase class-I L3V65_07205 PF00202 Aminotransferase class-III L3V65_07210 PF00696 Amino acid kinase family L3V65_07215 PF01960 ArgJ family L3V65_07220 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3V65_07220 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3V65_07265 PF00313 'Cold-shock' DNA-binding domain L3V65_07275 PF02016 LD-carboxypeptidase N-terminal domain L3V65_07275 PF17676 LD-carboxypeptidase C-terminal domain L3V65_07280 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family L3V65_07285 PF01553 Acyltransferase L3V65_07290 PF11084 Protein of unknown function (DUF2621) L3V65_07295 PF07301 Protein of unknown function (DUF1453) L3V65_07300 PF00072 Response regulator receiver domain L3V65_07305 PF02683 Cytochrome C biogenesis protein transmembrane region L3V65_07310 PF03672 Uncharacterised protein family (UPF0154) L3V65_07315 PF10747 Sporulation inhibitor of replication protein SirA L3V65_07320 PF02780 Transketolase, C-terminal domain L3V65_07320 PF00456 Transketolase, thiamine diphosphate binding domain L3V65_07320 PF02779 Transketolase, pyrimidine binding domain L3V65_07325 PF05979 Bacterial protein of unknown function (DUF896) L3V65_07330 PF00239 Resolvase, N terminal domain L3V65_07335 PF01476 LysM domain L3V65_07340 PF01726 LexA DNA binding domain L3V65_07340 PF00717 Peptidase S24-like L3V65_07345 PF03951 Glutamine synthetase, beta-Grasp domain L3V65_07345 PF00120 Glutamine synthetase, catalytic domain L3V65_07350 PF13411 MerR HTH family regulatory protein L3V65_07355 PF00350 Dynamin family L3V65_07370 PF00860 Permease family L3V65_07375 PF00156 Phosphoribosyl transferase domain L3V65_07380 PF02074 Carboxypeptidase Taq (M32) metallopeptidase L3V65_07385 PF02926 THUMP domain L3V65_07385 PF01170 Putative RNA methylase family UPF0020 L3V65_07395 PF05103 DivIVA protein L3V65_07400 PF06908 YspA SLOG family L3V65_07410 PF13482 RNase_H superfamily L3V65_07415 PF00270 DEAD/DEAH box helicase L3V65_07415 PF00271 Helicase conserved C-terminal domain L3V65_07415 PF09369 Domain of unknown function (DUF1998) L3V65_07420 PF00011 Hsp20/alpha crystallin family L3V65_07425 PF14179 YppG-like protein L3V65_07445 PF03838 Recombination protein U L3V65_07450 PF00905 Penicillin binding protein transpeptidase domain L3V65_07450 PF00912 Transglycosylase L3V65_07455 PF10576 Iron-sulfur binding domain of endonuclease III L3V65_07455 PF00633 Helix-hairpin-helix motif L3V65_07455 PF00730 HhH-GPD superfamily base excision DNA repair protein L3V65_07460 PF07261 Replication initiation and membrane attachment L3V65_07465 PF00152 tRNA synthetases class II (D, K and N) L3V65_07465 PF01336 OB-fold nucleic acid binding domain L3V65_07470 PF00155 Aminotransferase class I and II L3V65_07480 PF13307 Helicase C-terminal domain L3V65_07480 PF04851 Type III restriction enzyme, res subunit L3V65_07480 PF00929 Exonuclease L3V65_07485 PF02261 Aspartate decarboxylase L3V65_07490 PF02569 Pantoate-beta-alanine ligase L3V65_07495 PF02548 Ketopantoate hydroxymethyltransferase L3V65_07500 PF02237 Biotin protein ligase C terminal domain L3V65_07500 PF03099 Biotin/lipoate A/B protein ligase family L3V65_07500 PF08279 HTH domain L3V65_07505 PF01743 Poly A polymerase head domain L3V65_07505 PF12627 Probable RNA and SrmB- binding site of polymerase A L3V65_07505 PF13735 tRNA nucleotidyltransferase domain 2 putative L3V65_07510 PF13439 Glycosyltransferase Family 4 L3V65_07510 PF00534 Glycosyl transferases group 1 L3V65_07515 PF02585 GlcNAc-PI de-N-acetylase L3V65_07520 PF05173 Dihydrodipicolinate reductase, C-terminus L3V65_07520 PF01113 Dihydrodipicolinate reductase, N-terminus L3V65_07525 PF03819 MazG nucleotide pyrophosphohydrolase domain L3V65_07530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3V65_07530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L3V65_07545 PF04298 Putative neutral zinc metallopeptidase L3V65_07550 PF09577 Sporulation protein YpjB (SpoYpjB) L3V65_07555 PF07187 Protein of unknown function (DUF1405) L3V65_07560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L3V65_07560 PF00032 Cytochrome b(C-terminal)/b6/petD L3V65_07570 PF00355 Rieske [2Fe-2S] domain L3V65_07580 PF08858 IDEAL domain L3V65_07580 PF08864 UPF0302 domain L3V65_07590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3V65_07595 PF01842 ACT domain L3V65_07595 PF02153 Prephenate dehydrogenase L3V65_07600 PF00155 Aminotransferase class I and II L3V65_07605 PF07736 Chorismate mutase type I L3V65_07610 PF01761 3-dehydroquinate synthase L3V65_07615 PF01264 Chorismate synthase L3V65_07620 PF03705 CheR methyltransferase, all-alpha domain L3V65_07620 PF01739 CheR methyltransferase, SAM binding domain L3V65_07625 PF00334 Nucleoside diphosphate kinase L3V65_07630 PF00348 Polyprenyl synthetase L3V65_07635 PF01209 ubiE/COQ5 methyltransferase family L3V65_07640 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 L3V65_07645 PF02081 Tryptophan RNA-binding attenuator protein L3V65_07650 PF00216 Bacterial DNA-binding protein L3V65_07655 PF09547 Stage IV sporulation protein A (spore_IV_A) L3V65_07670 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L3V65_07670 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L3V65_07675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L3V65_07675 PF01926 50S ribosome-binding GTPase L3V65_07685 PF14140 YpzI-like protein L3V65_07690 PF00575 S1 RNA binding domain L3V65_07695 PF02224 Cytidylate kinase L3V65_07705 PF03413 Peptidase propeptide and YPEB domain L3V65_07705 PF14620 YpeB sporulation L3V65_07710 PF01471 Putative peptidoglycan binding domain L3V65_07710 PF07486 Cell Wall Hydrolase L3V65_07715 PF13367 PrsW family intramembrane metalloprotease L3V65_07725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L3V65_07725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L3V65_07735 PF00149 Calcineurin-like phosphoesterase L3V65_07740 PF11007 Spore coat associated protein JA (CotJA) L3V65_07745 PF12652 CotJB protein L3V65_07750 PF05067 Manganese containing catalase L3V65_07755 PF10864 Protein of unknown function (DUF2663) L3V65_07765 PF02517 CPBP intramembrane metalloprotease L3V65_07770 PF00270 DEAD/DEAH box helicase L3V65_07770 PF00271 Helicase conserved C-terminal domain L3V65_07785 PF12822 ECF transporter, substrate-specific component L3V65_07790 PF10145 Phage-related minor tail protein L3V65_07790 PF01551 Peptidase family M23 L3V65_07790 PF01464 Transglycosylase SLT domain L3V65_07795 PF00672 HAMP domain L3V65_07795 PF18698 Histidine kinase sensor domain L3V65_07795 PF00512 His Kinase A (phospho-acceptor) domain L3V65_07795 PF00989 PAS fold L3V65_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_07800 PF00072 Response regulator receiver domain L3V65_07800 PF00486 Transcriptional regulatory protein, C terminal L3V65_07805 PF01578 Cytochrome C assembly protein L3V65_07810 PF05140 ResB-like family L3V65_07815 PF00578 AhpC/TSA family L3V65_07820 PF01479 S4 domain L3V65_07820 PF00849 RNA pseudouridylate synthase L3V65_07825 PF07670 Nucleoside recognition L3V65_07830 PF07670 Nucleoside recognition L3V65_07835 PF07943 Penicillin-binding protein 5, C-terminal domain L3V65_07835 PF00768 D-alanyl-D-alanine carboxypeptidase L3V65_07840 PF04079 Segregation and condensation complex subunit ScpB L3V65_07845 PF02616 Segregation and condensation protein ScpA L3V65_07850 PF09680 Family of unknown function L3V65_07855 PF00583 Acetyltransferase (GNAT) family L3V65_07860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3V65_07860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3V65_07865 PF03323 Bacillus/Clostridium GerA spore germination protein L3V65_07870 PF14097 Stage V sporulation protein AE1 L3V65_07875 PF13782 Stage V sporulation protein AB L3V65_07880 PF12164 Stage V sporulation protein AA L3V65_07885 PF04542 Sigma-70 region 2 L3V65_07885 PF04539 Sigma-70 region 3 L3V65_07885 PF04545 Sigma-70, region 4 L3V65_07890 PF13581 Histidine kinase-like ATPase domain L3V65_07895 PF01740 STAS domain L3V65_07900 PF07943 Penicillin-binding protein 5, C-terminal domain L3V65_07900 PF00768 D-alanyl-D-alanine carboxypeptidase L3V65_07905 PF02899 Phage integrase, N-terminal SAM-like domain L3V65_07905 PF00589 Phage integrase family L3V65_07910 PF14004 Protein of unknown function (DUF4227) L3V65_07915 PF01475 Ferric uptake regulator family L3V65_07920 PF01944 Stage II sporulation protein M L3V65_07930 PF00293 NUDIX domain L3V65_07935 PF13072 Mother cell inhibitor of FtsZ L3V65_07940 PF00248 Aldo/keto reductase family L3V65_07950 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein L3V65_07955 PF05816 Toxic anion resistance protein (TelA) L3V65_07960 PF12146 Serine aminopeptidase, S33 L3V65_07965 PF00704 Glycosyl hydrolases family 18 L3V65_07965 PF01476 LysM domain L3V65_07970 PF08863 YolD-like protein L3V65_07975 PF00817 impB/mucB/samB family L3V65_07975 PF11799 impB/mucB/samB family C-terminal domain L3V65_07980 PF00106 short chain dehydrogenase L3V65_07985 PF14748 Pyrroline-5-carboxylate reductase dimerisation L3V65_07985 PF03807 NADP oxidoreductase coenzyme F420-dependent L3V65_07990 PF12706 Beta-lactamase superfamily domain L3V65_07995 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L3V65_07995 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L3V65_08000 PF00817 impB/mucB/samB family L3V65_08000 PF11799 impB/mucB/samB family C-terminal domain L3V65_08000 PF11798 IMS family HHH motif L3V65_08010 PF07687 Peptidase dimerisation domain L3V65_08010 PF01546 Peptidase family M20/M25/M40 L3V65_08020 PF03734 L,D-transpeptidase catalytic domain L3V65_08025 PF06491 Disulphide isomerase L3V65_08030 PF00294 pfkB family carbohydrate kinase L3V65_08035 PF02817 e3 binding domain L3V65_08035 PF00364 Biotin-requiring enzyme L3V65_08035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3V65_08040 PF02780 Transketolase, C-terminal domain L3V65_08040 PF02779 Transketolase, pyrimidine binding domain L3V65_08045 PF00676 Dehydrogenase E1 component L3V65_08050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3V65_08050 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_08055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L3V65_08055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L3V65_08060 PF00158 Sigma-54 interaction domain L3V65_08060 PF00989 PAS fold L3V65_08060 PF02954 Bacterial regulatory protein, Fis family L3V65_08075 PF03009 Glycerophosphoryl diester phosphodiesterase family L3V65_08080 PF00072 Response regulator receiver domain L3V65_08080 PF08769 Sporulation initiation factor Spo0A C terminal L3V65_08085 PF17820 PDZ domain L3V65_08085 PF05580 SpoIVB peptidase S55 L3V65_08090 PF13476 AAA domain L3V65_08095 PF02863 Arginine repressor, C-terminal domain L3V65_08095 PF01316 Arginine repressor, DNA binding domain L3V65_08100 PF01728 FtsJ-like methyltransferase L3V65_08100 PF01479 S4 domain L3V65_08105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L3V65_08105 PF02779 Transketolase, pyrimidine binding domain L3V65_08105 PF02780 Transketolase, C-terminal domain L3V65_08110 PF00348 Polyprenyl synthetase L3V65_08115 PF02609 Exonuclease VII small subunit L3V65_08120 PF02601 Exonuclease VII, large subunit L3V65_08120 PF13742 OB-fold nucleic acid binding domain L3V65_08125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L3V65_08125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L3V65_08130 PF01029 NusB family L3V65_08135 PF03780 Asp23 family, cell envelope-related function L3V65_08140 PF02785 Biotin carboxylase C-terminal domain L3V65_08140 PF00289 Biotin carboxylase, N-terminal domain L3V65_08140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3V65_08145 PF00364 Biotin-requiring enzyme L3V65_08150 PF12685 SpoIIIAH-like protein L3V65_08160 PF09581 Stage III sporulation protein AF (Spore_III_AF) L3V65_08165 PF09546 Stage III sporulation protein AE (spore_III_AE) L3V65_08170 PF06686 Stage III sporulation protein AC/AD protein family L3V65_08175 PF06686 Stage III sporulation protein AC/AD protein family L3V65_08180 PF09548 Stage III sporulation protein AB (spore_III_AB) L3V65_08190 PF01132 Elongation factor P (EF-P) OB domain L3V65_08190 PF08207 Elongation factor P (EF-P) KOW-like domain L3V65_08190 PF09285 Elongation factor P, C-terminal L3V65_08195 PF01321 Creatinase/Prolidase N-terminal domain L3V65_08195 PF00557 Metallopeptidase family M24 L3V65_08200 PF01220 Dehydroquinase class II L3V65_08205 PF11085 Conserved membrane protein YqhR L3V65_08210 PF07136 Protein of unknown function (DUF1385) L3V65_08220 PF01734 Patatin-like phospholipase L3V65_08240 PF02867 Ribonucleotide reductase, barrel domain L3V65_08240 PF00317 Ribonucleotide reductase, all-alpha domain L3V65_08240 PF03477 ATP cone domain L3V65_08245 PF03099 Biotin/lipoate A/B protein ligase family L3V65_08250 PF00581 Rhodanese-like domain L3V65_08255 PF02347 Glycine cleavage system P-protein L3V65_08265 PF01571 Aminomethyltransferase folate-binding domain L3V65_08265 PF08669 Glycine cleavage T-protein C-terminal barrel domain L3V65_08270 PF00176 SNF2 family N-terminal domain L3V65_08270 PF00271 Helicase conserved C-terminal domain L3V65_08275 PF11079 Bacterial protein YqhG of unknown function L3V65_08285 PF01202 Shikimate kinase L3V65_08310 PF07963 Prokaryotic N-terminal methylation motif L3V65_08315 PF00482 Type II secretion system (T2SS), protein F L3V65_08320 PF00437 Type II/IV secretion system protein L3V65_08330 PF11117 Protein of unknown function (DUF2626) L3V65_08335 PF00753 Metallo-beta-lactamase superfamily L3V65_08340 PF10958 Protein of unknown function (DUF2759) L3V65_08345 PF00480 ROK family L3V65_08350 PF06014 Bacterial protein of unknown function (DUF910) L3V65_08355 PF01694 Rhomboid family L3V65_08365 PF00471 Ribosomal protein L33 L3V65_08375 PF00905 Penicillin binding protein transpeptidase domain L3V65_08375 PF03717 Penicillin-binding Protein dimerisation domain L3V65_08380 PF07690 Major Facilitator Superfamily L3V65_08385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L3V65_08385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L3V65_08395 PF04551 GcpE protein L3V65_08400 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) L3V65_08405 PF01475 Ferric uptake regulator family L3V65_08410 PF00950 ABC 3 transport family L3V65_08415 PF00005 ABC transporter L3V65_08425 PF00877 NlpC/P60 family L3V65_08430 PF01261 Xylose isomerase-like TIM barrel L3V65_08435 PF00271 Helicase conserved C-terminal domain L3V65_08435 PF00270 DEAD/DEAH box helicase L3V65_08445 PF02401 LytB protein L3V65_08455 PF04816 tRNA (adenine(22)-N(1))-methyltransferase L3V65_08460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L3V65_08470 PF04545 Sigma-70, region 4 L3V65_08470 PF03979 Sigma-70 factor, region 1.1 L3V65_08470 PF00140 Sigma-70 factor, region 1.2 L3V65_08470 PF04542 Sigma-70 region 2 L3V65_08470 PF04539 Sigma-70 region 3 L3V65_08475 PF08275 DNA primase catalytic core, N-terminal domain L3V65_08475 PF01807 CHC2 zinc finger L3V65_08475 PF10410 DnaB-helicase binding domain of primase L3V65_08480 PF03618 Kinase/pyrophosphorylase L3V65_08485 PF00571 CBS domain L3V65_08485 PF08279 HTH domain L3V65_08490 PF02565 Recombination protein O C terminal L3V65_08490 PF11967 Recombination protein O N terminal L3V65_08495 PF14006 YqzL-like protein L3V65_08500 PF07650 KH domain L3V65_08500 PF01926 50S ribosome-binding GTPase L3V65_08505 PF01219 Prokaryotic diacylglycerol kinase L3V65_08510 PF02130 Uncharacterized protein family UPF0054 L3V65_08515 PF01966 HD domain L3V65_08515 PF07697 7TM-HD extracellular L3V65_08515 PF07698 7TM receptor with intracellular HD hydrolase L3V65_08520 PF02562 PhoH-like protein L3V65_08525 PF06898 Putative stage IV sporulation protein YqfD L3V65_08530 PF07873 YabP family L3V65_08535 PF09424 Yqey-like protein L3V65_08540 PF01165 Ribosomal protein S21 L3V65_08550 PF00708 Acylphosphatase L3V65_08555 PF02690 Na+/Pi-cotransporter L3V65_08560 PF00919 Uncharacterized protein family UPF0004 L3V65_08560 PF01938 TRAM domain L3V65_08560 PF04055 Radical SAM superfamily L3V65_08565 PF04452 RNA methyltransferase L3V65_08575 PF00684 DnaJ central domain L3V65_08575 PF01556 DnaJ C terminal domain L3V65_08575 PF00226 DnaJ domain L3V65_08580 PF00012 Hsp70 protein L3V65_08585 PF01025 GrpE L3V65_08590 PF01628 HrcA protein C terminal domain L3V65_08595 PF06969 HemN C-terminal domain L3V65_08595 PF04055 Radical SAM superfamily L3V65_08600 PF00679 Elongation factor G C-terminus L3V65_08600 PF00009 Elongation factor Tu GTP binding domain L3V65_08600 PF03144 Elongation factor Tu domain 2 L3V65_08600 PF06421 GTP-binding protein LepA C-terminus L3V65_08605 PF07454 Stage II sporulation protein P (SpoIIP) L3V65_08610 PF03418 Germination protease L3V65_08615 PF01649 Ribosomal protein S20 L3V65_08620 PF06144 DNA polymerase III, delta subunit L3V65_08625 PF14141 YqzM-like protein L3V65_08635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3V65_08640 PF10531 SLBB domain L3V65_08645 PF03807 NADP oxidoreductase coenzyme F420-dependent L3V65_08645 PF14748 Pyrroline-5-carboxylate reductase dimerisation L3V65_08650 PF13649 Methyltransferase domain L3V65_08660 PF01966 HD domain L3V65_08665 PF01467 Cytidylyltransferase-like L3V65_08670 PF01985 CRS1 / YhbY (CRM) domain L3V65_08675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L3V65_08675 PF01488 Shikimate / quinate 5-dehydrogenase L3V65_08675 PF08501 Shikimate dehydrogenase substrate binding domain L3V65_08680 PF01926 50S ribosome-binding GTPase L3V65_08690 PF02754 Cysteine-rich domain L3V65_08690 PF13183 4Fe-4S dicluster domain L3V65_08695 PF01565 FAD binding domain L3V65_08695 PF02913 FAD linked oxidases, C-terminal domain L3V65_08700 PF17853 GGDEF-like domain L3V65_08700 PF13556 PucR C-terminal helix-turn-helix domain L3V65_08700 PF05651 Putative sugar diacid recognition L3V65_08705 PF07731 Multicopper oxidase L3V65_08705 PF07732 Multicopper oxidase L3V65_08710 PF00011 Hsp20/alpha crystallin family L3V65_08720 PF00578 AhpC/TSA family L3V65_08730 PF04011 LemA family L3V65_08735 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3V65_08740 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3V65_08750 PF16916 Dimerisation domain of Zinc Transporter L3V65_08750 PF01545 Cation efflux family L3V65_08755 PF08970 Sporulation inhibitor A L3V65_08760 PF01066 CDP-alcohol phosphatidyltransferase L3V65_08765 PF04545 Sigma-70, region 4 L3V65_08765 PF04542 Sigma-70 region 2 L3V65_08770 PF13192 Thioredoxin domain L3V65_08770 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_08775 PF00578 AhpC/TSA family L3V65_08780 PF09501 Probable sporulation protein (Bac_small_yrzI) L3V65_08785 PF14143 YrhC-like protein L3V65_08790 PF01048 Phosphorylase superfamily L3V65_08800 PF07423 Domain of unknown function (DUF1510) L3V65_08805 PF01272 Transcription elongation factor, GreA/GreB, C-term L3V65_08805 PF03449 Transcription elongation factor, N-terminal L3V65_08810 PF00485 Phosphoribulokinase / Uridine kinase family L3V65_08815 PF01596 O-methyltransferase L3V65_08820 PF02618 YceG-like family L3V65_08825 PF06949 Protein of unknown function (DUF1292) L3V65_08830 PF03652 Holliday junction resolvase L3V65_08835 PF06135 IreB regulatory phosphoprotein L3V65_08840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3V65_08840 PF01411 tRNA synthetases class II (A) L3V65_08840 PF02272 DHHA1 domain L3V65_08845 PF01594 AI-2E family transporter L3V65_08860 PF10710 Protein of unknown function (DUF2512) L3V65_08865 PF13538 UvrD-like helicase C-terminal domain L3V65_08865 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain L3V65_08865 PF14490 Helix-hairpin-helix containing domain L3V65_08880 PF00266 Aminotransferase class-V L3V65_08885 PF02082 Transcriptional regulator L3V65_08895 PF16193 AAA C-terminal domain L3V65_08895 PF12002 MgsA AAA+ ATPase C terminal L3V65_08895 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3V65_08900 PF00899 ThiF family L3V65_08905 PF01758 Sodium Bile acid symporter family L3V65_08915 PF01336 OB-fold nucleic acid binding domain L3V65_08915 PF02938 GAD domain L3V65_08915 PF00152 tRNA synthetases class II (D, K and N) L3V65_08920 PF13393 Histidyl-tRNA synthetase L3V65_08920 PF03129 Anticodon binding domain L3V65_08930 PF01520 N-acetylmuramoyl-L-alanine amidase L3V65_08930 PF08239 Bacterial SH3 domain L3V65_08935 PF07690 Major Facilitator Superfamily L3V65_08945 PF01047 MarR family L3V65_08950 PF02580 D-Tyr-tRNA(Tyr) deacylase L3V65_08955 PF13291 ACT domain L3V65_08955 PF04607 Region found in RelA / SpoT proteins L3V65_08955 PF02824 TGS domain L3V65_08960 PF00156 Phosphoribosyl transferase domain L3V65_08965 PF01368 DHH family L3V65_08965 PF02272 DHHA1 domain L3V65_08965 PF10141 Single-strand DNA-specific exonuclease, C terminal domain L3V65_08965 PF17768 RecJ OB domain L3V65_08970 PF07549 SecD/SecF GG Motif L3V65_08970 PF02355 Protein export membrane protein L3V65_08980 PF01943 Polysaccharide biosynthesis protein L3V65_08980 PF14667 Polysaccharide biosynthesis C-terminal domain L3V65_08985 PF04239 Protein of unknown function (DUF421) L3V65_08995 PF02699 Preprotein translocase subunit L3V65_09000 PF01702 Queuine tRNA-ribosyltransferase L3V65_09005 PF02547 Queuosine biosynthesis protein L3V65_09010 PF11146 Protein of unknown function (DUF2905) L3V65_09015 PF05491 RuvB C-terminal winged helix domain L3V65_09015 PF17864 RuvB AAA lid domain L3V65_09015 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3V65_09020 PF07499 RuvA, C-terminal domain L3V65_09020 PF01330 RuvA N terminal domain L3V65_09025 PF01709 Transcriptional regulator L3V65_09035 PF01476 LysM domain L3V65_09040 PF08279 HTH domain L3V65_09040 PF02829 3H domain L3V65_09045 PF00800 Prephenate dehydratase L3V65_09045 PF01842 ACT domain L3V65_09050 PF01842 ACT domain L3V65_09055 PF09269 Domain of unknown function (DUF1967) L3V65_09055 PF01926 50S ribosome-binding GTPase L3V65_09055 PF01018 GTP1/OBG L3V65_09060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L3V65_09060 PF14682 Sporulation initiation phospho-transferase B, C-terminal L3V65_09065 PF01016 Ribosomal L27 protein L3V65_09070 PF04327 Cysteine protease Prp L3V65_09075 PF00829 Ribosomal prokaryotic L21 protein L3V65_09080 PF10150 Ribonuclease E/G family L3V65_09080 PF00575 S1 RNA binding domain L3V65_09085 PF02163 Peptidase family M50 L3V65_09095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L3V65_09100 PF03775 Septum formation inhibitor MinC, C-terminal domain L3V65_09110 PF04085 rod shape-determining protein MreC L3V65_09120 PF04002 RadC-like JAB domain L3V65_09130 PF01478 Type IV leader peptidase family L3V65_09130 PF06750 Bacterial Peptidase A24 N-terminal domain L3V65_09155 PF00482 Type II secretion system (T2SS), protein F L3V65_09160 PF00437 Type II/IV secretion system protein L3V65_09165 PF00437 Type II/IV secretion system protein L3V65_09165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L3V65_09205 PF02875 Mur ligase family, glutamate ligase domain L3V65_09205 PF08245 Mur ligase middle domain L3V65_09210 PF10458 Valyl tRNA synthetase tRNA binding arm L3V65_09210 PF00133 tRNA synthetases class I (I, L, M and V) L3V65_09210 PF08264 Anticodon-binding domain of tRNA L3V65_09225 PF01476 LysM domain L3V65_09225 PF01476 LysM domain L3V65_09230 PF00202 Aminotransferase class-III L3V65_09235 PF00490 Delta-aminolevulinic acid dehydratase L3V65_09245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L3V65_09245 PF03900 Porphobilinogen deaminase, C-terminal domain L3V65_09250 PF01578 Cytochrome C assembly protein L3V65_09255 PF01488 Shikimate / quinate 5-dehydrogenase L3V65_09255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain L3V65_09255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain L3V65_09265 PF01926 50S ribosome-binding GTPase L3V65_09270 PF02190 ATP-dependent protease La (LON) substrate-binding domain L3V65_09270 PF05362 Lon protease (S16) C-terminal proteolytic domain L3V65_09270 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_09275 PF05362 Lon protease (S16) C-terminal proteolytic domain L3V65_09275 PF00004 ATPase family associated with various cellular activities (AAA) L3V65_09280 PF07724 AAA domain (Cdc48 subfamily) L3V65_09280 PF06689 ClpX C4-type zinc finger L3V65_09280 PF10431 C-terminal, D2-small domain, of ClpB protein L3V65_09285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3V65_09285 PF05698 Bacterial trigger factor protein (TF) C-terminus L3V65_09285 PF05697 Bacterial trigger factor protein (TF) L3V65_09295 PF10710 Protein of unknown function (DUF2512) L3V65_09310 PF12850 Calcineurin-like phosphoesterase superfamily domain L3V65_09315 PF01725 Ham1 family L3V65_09320 PF10646 Sporulation and spore germination L3V65_09330 PF07875 Coat F domain L3V65_09340 PF01177 Asp/Glu/Hydantoin racemase L3V65_09345 PF01047 MarR family L3V65_09365 PF00196 Bacterial regulatory proteins, luxR family L3V65_09375 PF03061 Thioesterase superfamily L3V65_09380 PF13183 4Fe-4S dicluster domain L3V65_09380 PF13085 2Fe-2S iron-sulfur cluster binding domain L3V65_09385 PF02910 Fumarate reductase flavoprotein C-term L3V65_09385 PF00890 FAD binding domain L3V65_09390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L3V65_09400 PF10702 Protein of unknown function (DUF2507) L3V65_09405 PF13840 ACT domain L3V65_09405 PF00696 Amino acid kinase family L3V65_09410 PF01541 GIY-YIG catalytic domain L3V65_09410 PF02151 UvrB/uvrC motif L3V65_09410 PF08459 UvrC Helix-hairpin-helix N-terminal L3V65_09415 PF00085 Thioredoxin L3V65_09420 PF00766 Electron transfer flavoprotein FAD-binding domain L3V65_09420 PF01012 Electron transfer flavoprotein domain L3V65_09425 PF01012 Electron transfer flavoprotein domain L3V65_09430 PF00378 Enoyl-CoA hydratase/isomerase L3V65_09435 PF00440 Bacterial regulatory proteins, tetR family L3V65_09435 PF08359 YsiA-like protein, C-terminal region L3V65_09440 PF13193 AMP-binding enzyme C-terminal domain L3V65_09440 PF00501 AMP-binding enzyme L3V65_09445 PF01713 Smr domain L3V65_09445 PF00488 MutS domain V L3V65_09450 PF14716 Helix-hairpin-helix domain L3V65_09450 PF14791 DNA polymerase beta thumb L3V65_09450 PF02811 PHP domain L3V65_09455 PF02674 Colicin V production protein L3V65_09460 PF05164 Cell division protein ZapA L3V65_09465 PF11858 Domain of unknown function (DUF3378) L3V65_09465 PF01351 Ribonuclease HII L3V65_09470 PF06445 GyrI-like small molecule binding domain L3V65_09470 PF13411 MerR HTH family regulatory protein L3V65_09480 PF03483 B3/4 domain L3V65_09480 PF03484 tRNA synthetase B5 domain L3V65_09480 PF03147 Ferredoxin-fold anticodon binding domain L3V65_09480 PF01588 Putative tRNA binding domain L3V65_09480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L3V65_09485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L3V65_09485 PF01409 tRNA synthetases class II core domain (F) L3V65_09490 PF00588 SpoU rRNA Methylase family L3V65_09490 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3V65_09495 PF14098 Small, acid-soluble spore protein I L3V65_09515 PF03551 Transcriptional regulator PadR-like family L3V65_09525 PF06508 Queuosine biosynthesis protein QueC L3V65_09535 PF03358 NADPH-dependent FMN reductase L3V65_09540 PF05343 M42 glutamyl aminopeptidase L3V65_09545 PF00692 dUTPase L3V65_09555 PF00453 Ribosomal protein L20 L3V65_09560 PF01632 Ribosomal protein L35 L3V65_09565 PF00707 Translation initiation factor IF-3, C-terminal domain L3V65_09565 PF05198 Translation initiation factor IF-3, N-terminal domain L3V65_09575 PF03129 Anticodon binding domain L3V65_09575 PF02824 TGS domain L3V65_09575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3V65_09575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3V65_09580 PF08812 YtxC-like family L3V65_09585 PF01695 IstB-like ATP binding protein L3V65_09585 PF07319 Primosomal protein DnaI N-terminus L3V65_09590 PF07261 Replication initiation and membrane attachment L3V65_09595 PF03477 ATP cone domain L3V65_09605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3V65_09605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3V65_09610 PF01121 Dephospho-CoA kinase L3V65_09615 PF02659 Putative manganese efflux pump L3V65_09620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L3V65_09620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3V65_09620 PF06827 Zinc finger found in FPG and IleRS L3V65_09625 PF01367 5'-3' exonuclease, C-terminal SAM fold L3V65_09625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3V65_09625 PF00476 DNA polymerase family A L3V65_09630 PF00056 lactate/malate dehydrogenase, NAD binding domain L3V65_09630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L3V65_09635 PF00180 Isocitrate/isopropylmalate dehydrogenase L3V65_09640 PF00285 Citrate synthase, C-terminal domain L3V65_09645 PF04284 Protein of unknown function (DUF441) L3V65_09650 PF01594 AI-2E family transporter L3V65_09655 PF02887 Pyruvate kinase, alpha/beta domain L3V65_09655 PF00391 PEP-utilising enzyme, mobile domain L3V65_09655 PF00224 Pyruvate kinase, barrel domain L3V65_09660 PF00365 Phosphofructokinase L3V65_09665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L3V65_09670 PF01039 Carboxyl transferase domain L3V65_09670 PF17848 Acetyl-coA carboxylase zinc finger domain L3V65_09675 PF00390 Malic enzyme, N-terminal domain L3V65_09675 PF03949 Malic enzyme, NAD binding domain L3V65_09680 PF01336 OB-fold nucleic acid binding domain L3V65_09680 PF02811 PHP domain L3V65_09680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3V65_09680 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3V65_09680 PF14579 Helix-hairpin-helix motif L3V65_09695 PF01368 DHH family L3V65_09695 PF02272 DHHA1 domain L3V65_09705 PF03061 Thioesterase superfamily L3V65_09705 PF00571 CBS domain L3V65_09705 PF07085 DRTGG domain L3V65_09705 PF00392 Bacterial regulatory proteins, gntR family L3V65_09715 PF01321 Creatinase/Prolidase N-terminal domain L3V65_09715 PF00557 Metallopeptidase family M24 L3V65_09720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3V65_09720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L3V65_09730 PF00582 Universal stress protein family L3V65_09740 PF00871 Acetokinase family L3V65_09745 PF02384 N-6 DNA Methylase L3V65_09750 PF08534 Redoxin L3V65_09755 PF09579 Sporulation protein YtfJ (Spore_YtfJ) L3V65_09765 PF06271 RDD family L3V65_09770 PF01343 Peptidase family S49 L3V65_09775 PF00501 AMP-binding enzyme L3V65_09775 PF13193 AMP-binding enzyme C-terminal domain L3V65_09780 PF00269 Small, acid-soluble spore proteins, alpha/beta type L3V65_09785 PF02568 Thiamine biosynthesis protein (ThiI) L3V65_09785 PF02926 THUMP domain L3V65_09790 PF00266 Aminotransferase class-V L3V65_09795 PF06160 Septation ring formation regulator, EzrA L3V65_09800 PF00440 Bacterial regulatory proteins, tetR family L3V65_09805 PF13185 GAF domain L3V65_09810 PF00990 Diguanylate cyclase, GGDEF domain L3V65_09815 PF00163 Ribosomal protein S4/S9 N-terminal domain L3V65_09815 PF01479 S4 domain L3V65_09830 PF01619 Proline dehydrogenase L3V65_09835 PF00171 Aldehyde dehydrogenase family L3V65_09840 PF00158 Sigma-54 interaction domain L3V65_09840 PF00989 PAS fold L3V65_09840 PF02954 Bacterial regulatory protein, Fis family L3V65_09845 PF01479 S4 domain L3V65_09845 PF00579 tRNA synthetases class I (W and Y) L3V65_09865 PF00583 Acetyltransferase (GNAT) family L3V65_09870 PF00571 CBS domain L3V65_09875 PF00850 Histone deacetylase domain L3V65_09880 PF00356 Bacterial regulatory proteins, lacI family L3V65_09885 PF00793 DAHP synthetase I family L3V65_09885 PF01817 Chorismate mutase type II L3V65_09890 PF12732 YtxH-like protein L3V65_09900 PF01225 Mur ligase family, catalytic domain L3V65_09900 PF02875 Mur ligase family, glutamate ligase domain L3V65_09900 PF08245 Mur ligase middle domain L3V65_09905 PF17854 FtsK alpha domain L3V65_09905 PF09397 Ftsk gamma domain L3V65_09905 PF01580 FtsK/SpoIIIE family L3V65_09910 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) L3V65_09920 PF07285 Protein of unknown function (DUF1444) L3V65_09925 PF00085 Thioredoxin L3V65_09930 PF07228 Stage II sporulation protein E (SpoIIE) L3V65_09930 PF13426 PAS domain L3V65_09945 PF03413 Peptidase propeptide and YPEB domain L3V65_09950 PF00753 Metallo-beta-lactamase superfamily L3V65_09955 PF02390 Putative methyltransferase L3V65_09960 PF14165 YtzH-like protein L3V65_09965 PF01636 Phosphotransferase enzyme family L3V65_09975 PF02834 LigT like Phosphoesterase L3V65_09985 PF01063 Amino-transferase class IV L3V65_09990 PF01546 Peptidase family M20/M25/M40 L3V65_09995 PF08220 DeoR-like helix-turn-helix domain L3V65_10000 PF01943 Polysaccharide biosynthesis protein L3V65_10000 PF14667 Polysaccharide biosynthesis C-terminal domain L3V65_10005 PF10957 Sporulation protein Cse60 L3V65_10020 PF08264 Anticodon-binding domain of tRNA L3V65_10020 PF00133 tRNA synthetases class I (I, L, M and V) L3V65_10020 PF13603 Leucyl-tRNA synthetase, Domain 2 L3V65_10020 PF09334 tRNA synthetases class I (M) L3V65_10025 PF07690 Major Facilitator Superfamily L3V65_10030 PF10732 Protein of unknown function (DUF2524) L3V65_10035 PF06962 Putative rRNA methylase L3V65_10040 PF10776 Protein of unknown function (DUF2600) L3V65_10045 PF12146 Serine aminopeptidase, S33 L3V65_10050 PF00132 Bacterial transferase hexapeptide (six repeats) L3V65_10055 PF00733 Asparagine synthase L3V65_10055 PF13537 Glutamine amidotransferase domain L3V65_10060 PF02772 S-adenosylmethionine synthetase, central domain L3V65_10060 PF00438 S-adenosylmethionine synthetase, N-terminal domain L3V65_10060 PF02773 S-adenosylmethionine synthetase, C-terminal domain L3V65_10065 PF01293 Phosphoenolpyruvate carboxykinase L3V65_10085 PF13358 DDE superfamily endonuclease L3V65_10095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L3V65_10095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L3V65_10100 PF06463 Molybdenum Cofactor Synthesis C L3V65_10100 PF04055 Radical SAM superfamily L3V65_10105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L3V65_10110 PF00933 Glycosyl hydrolase family 3 N terminal domain L3V65_10110 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3V65_10140 PF00326 Prolyl oligopeptidase family L3V65_10145 PF03358 NADPH-dependent FMN reductase L3V65_10150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3V65_10150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3V65_10160 PF00005 ABC transporter L3V65_10165 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_10185 PF00210 Ferritin-like domain L3V65_10190 PF01809 Putative membrane protein insertion efficiency factor L3V65_10200 PF01297 Zinc-uptake complex component A periplasmic L3V65_10205 PF07561 Domain of Unknown Function (DUF1540) L3V65_10210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3V65_10210 PF13378 Enolase C-terminal domain-like L3V65_10215 PF00501 AMP-binding enzyme L3V65_10215 PF13193 AMP-binding enzyme C-terminal domain L3V65_10220 PF00378 Enoyl-CoA hydratase/isomerase L3V65_10225 PF00561 alpha/beta hydrolase fold L3V65_10230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3V65_10230 PF16582 Middle domain of thiamine pyrophosphate L3V65_10230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3V65_10235 PF00425 chorismate binding enzyme L3V65_10240 PF01040 UbiA prenyltransferase family L3V65_10370 PF02308 MgtC family L3V65_10385 PF00403 Heavy-metal-associated domain L3V65_10390 PF00403 Heavy-metal-associated domain L3V65_10405 PF01037 Lrp/AsnC ligand binding domain L3V65_10420 PF11755 Protein of unknown function (DUF3311) L3V65_10425 PF00474 Sodium:solute symporter family L3V65_10435 PF03860 Domain of Unknown Function (DUF326) L3V65_10445 PF01522 Polysaccharide deacetylase L3V65_10465 PF00654 Voltage gated chloride channel L3V65_10475 PF00581 Rhodanese-like domain L3V65_10480 PF02583 Metal-sensitive transcriptional repressor L3V65_10485 PF05901 Excalibur calcium-binding domain L3V65_10485 PF00565 Staphylococcal nuclease homologue L3V65_10490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_10495 PF11762 L-arabinose isomerase C-terminal domain L3V65_10495 PF02610 L-arabinose isomerase L3V65_10500 PF00596 Class II Aldolase and Adducin N-terminal domain L3V65_10505 PF00083 Sugar (and other) transporter L3V65_10515 PF00392 Bacterial regulatory proteins, gntR family L3V65_10520 PF02743 Cache domain L3V65_10520 PF00672 HAMP domain L3V65_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_10545 PF02681 Divergent PAP2 family L3V65_10550 PF01266 FAD dependent oxidoreductase L3V65_10555 PF01266 FAD dependent oxidoreductase L3V65_10560 PF00171 Aldehyde dehydrogenase family L3V65_10565 PF02423 Ornithine cyclodeaminase/mu-crystallin family L3V65_10580 PF07885 Ion channel L3V65_10580 PF02254 TrkA-N domain L3V65_10585 PF00342 Phosphoglucose isomerase L3V65_10590 PF04070 Domain of unknown function (DUF378) L3V65_10600 PF00575 S1 RNA binding domain L3V65_10610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L3V65_10615 PF00248 Aldo/keto reductase family L3V65_10620 PF00248 Aldo/keto reductase family L3V65_10635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L3V65_10640 PF08810 Kinase associated protein B L3V65_10645 PF07690 Major Facilitator Superfamily L3V65_10650 PF03061 Thioesterase superfamily L3V65_10665 PF03845 Spore germination protein L3V65_10670 PF05504 Spore germination B3/ GerAC like, C-terminal L3V65_10675 PF03323 Bacillus/Clostridium GerA spore germination protein L3V65_10685 PF00883 Cytosol aminopeptidase family, catalytic domain L3V65_10685 PF02789 Cytosol aminopeptidase family, N-terminal domain L3V65_10690 PF06725 3D domain L3V65_10695 PF14068 Putative membrane protein L3V65_10700 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_10735 PF01521 Iron-sulphur cluster biosynthesis L3V65_10740 PF07315 Protein of unknown function (DUF1462) L3V65_10745 PF01106 NifU-like domain L3V65_10755 PF04608 Phosphatidylglycerophosphatase A L3V65_10760 PF13344 Haloacid dehalogenase-like hydrolase L3V65_10765 PF01934 Protein of unknown function DUF86 L3V65_10770 PF06265 Protein of unknown function (DUF1027) L3V65_10775 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L3V65_10775 PF04055 Radical SAM superfamily L3V65_10780 PF01551 Peptidase family M23 L3V65_10785 PF09560 Sporulation protein YunB (Spo_YunB) L3V65_10790 PF08827 Domain of unknown function (DUF1805) L3V65_10795 PF02872 5'-nucleotidase, C-terminal domain L3V65_10800 PF01458 Uncharacterized protein family (UPF0051) L3V65_10805 PF01592 NifU-like N terminal domain L3V65_10810 PF00266 Aminotransferase class-V L3V65_10815 PF01458 Uncharacterized protein family (UPF0051) L3V65_10820 PF00005 ABC transporter L3V65_10830 PF00085 Thioredoxin L3V65_10835 PF01597 Glycine cleavage H-protein L3V65_10840 PF03960 ArsC family L3V65_10845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3V65_10845 PF02770 Acyl-CoA dehydrogenase, middle domain L3V65_10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3V65_10850 PF00108 Thiolase, N-terminal domain L3V65_10850 PF02803 Thiolase, C-terminal domain L3V65_10855 PF00378 Enoyl-CoA hydratase/isomerase L3V65_10855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3V65_10855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3V65_10860 PF14115 YuzL-like protein L3V65_10870 PF07875 Coat F domain L3V65_10875 PF01098 Cell cycle protein L3V65_10880 PF00085 Thioredoxin L3V65_10895 PF00873 AcrB/AcrD/AcrF family L3V65_10900 PF00563 EAL domain L3V65_10900 PF00990 Diguanylate cyclase, GGDEF domain L3V65_10900 PF03707 Bacterial signalling protein N terminal repeat L3V65_10905 PF00199 Catalase L3V65_10905 PF06628 Catalase-related immune-responsive L3V65_10910 PF01569 PAP2 superfamily L3V65_10915 PF01522 Polysaccharide deacetylase L3V65_10920 PF04101 Glycosyltransferase family 28 C-terminal domain L3V65_10920 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase L3V65_10935 PF04542 Sigma-70 region 2 L3V65_10935 PF08281 Sigma-70, region 4 L3V65_10940 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase L3V65_10980 PF01668 SmpB protein L3V65_10985 PF00575 S1 RNA binding domain L3V65_10985 PF17876 Cold shock domain L3V65_10985 PF08206 Ribonuclease B OB domain L3V65_10985 PF00773 RNB domain L3V65_10990 PF12146 Serine aminopeptidase, S33 L3V65_10995 PF03840 Preprotein translocase SecG subunit L3V65_11000 PF00113 Enolase, C-terminal TIM barrel domain L3V65_11000 PF03952 Enolase, N-terminal domain L3V65_11005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L3V65_11005 PF01676 Metalloenzyme superfamily L3V65_11010 PF00121 Triosephosphate isomerase L3V65_11015 PF00162 Phosphoglycerate kinase L3V65_11020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3V65_11020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3V65_11025 PF04198 Putative sugar-binding domain L3V65_11035 PF00309 Sigma-54 factor, Activator interacting domain (AID) L3V65_11035 PF04963 Sigma-54 factor, core binding domain L3V65_11035 PF04552 Sigma-54, DNA binding domain L3V65_11050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L3V65_11050 PF00384 Molybdopterin oxidoreductase L3V65_11050 PF01568 Molydopterin dinucleotide binding domain L3V65_11050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L3V65_11050 PF12838 4Fe-4S dicluster domain L3V65_11065 PF00912 Transglycosylase L3V65_11065 PF00905 Penicillin binding protein transpeptidase domain L3V65_11080 PF00005 ABC transporter L3V65_11080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_11085 PF00877 NlpC/P60 family L3V65_11090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3V65_11095 PF00005 ABC transporter L3V65_11095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3V65_11100 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_11100 PF12911 N-terminal TM domain of oligopeptide transport permease C L3V65_11105 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_11110 PF07722 Peptidase C26 L3V65_11115 PF01544 CorA-like Mg2+ transporter protein L3V65_11120 PF14148 YhdB-like protein L3V65_11125 PF04293 SpoVR like protein L3V65_11130 PF01757 Acyltransferase family L3V65_11140 PF02600 Disulfide bond formation protein DsbB L3V65_11155 PF01865 Protein of unknown function DUF47 L3V65_11160 PF01384 Phosphate transporter family L3V65_11175 PF04285 Protein of unknown function (DUF444) L3V65_11180 PF06798 PrkA serine protein kinase C-terminal domain L3V65_11180 PF08298 PrkA AAA domain L3V65_11185 PF00588 SpoU rRNA Methylase family L3V65_11190 PF12671 Putative amidase domain L3V65_11195 PF08331 Domain of unknown function (DUF1730) L3V65_11200 PF01914 MarC family integral membrane protein L3V65_11205 PF02833 DHHA2 domain L3V65_11205 PF01368 DHH family L3V65_11210 PF02915 Rubrerythrin L3V65_11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3V65_11220 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_11225 PF00005 ABC transporter L3V65_11230 PF01226 Formate/nitrite transporter L3V65_11235 PF01695 IstB-like ATP binding protein L3V65_11245 PF01228 Glycine radical L3V65_11245 PF02901 Pyruvate formate lyase-like L3V65_11250 PF04055 Radical SAM superfamily L3V65_11255 PF03358 NADPH-dependent FMN reductase L3V65_11270 PF00005 ABC transporter L3V65_11335 PF00324 Amino acid permease L3V65_11345 PF12822 ECF transporter, substrate-specific component L3V65_11350 PF07702 UTRA domain L3V65_11350 PF00392 Bacterial regulatory proteins, gntR family L3V65_11365 PF01266 FAD dependent oxidoreductase L3V65_11380 PF00202 Aminotransferase class-III L3V65_11395 PF01022 Bacterial regulatory protein, arsR family L3V65_11400 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3V65_11405 PF02040 Arsenical pump membrane protein L3V65_11410 PF01022 Bacterial regulatory protein, arsR family L3V65_11420 PF00672 HAMP domain L3V65_11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_11420 PF00512 His Kinase A (phospho-acceptor) domain L3V65_11425 PF00486 Transcriptional regulatory protein, C terminal L3V65_11425 PF00072 Response regulator receiver domain L3V65_11430 PF00899 ThiF family L3V65_11435 PF05690 Thiazole biosynthesis protein ThiG L3V65_11445 PF01266 FAD dependent oxidoreductase L3V65_11450 PF02581 Thiamine monophosphate synthase L3V65_11455 PF05977 Transmembrane secretion effector L3V65_11460 PF07690 Major Facilitator Superfamily L3V65_11470 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_11470 PF00107 Zinc-binding dehydrogenase L3V65_11480 PF00296 Luciferase-like monooxygenase L3V65_11485 PF04239 Protein of unknown function (DUF421) L3V65_11580 PF18576 Helix-turn-helix domain L3V65_11580 PF14540 Nucleotidyltransferase-like L3V65_11585 PF11023 Zinc-ribbon containing domain L3V65_11590 PF03306 Alpha-acetolactate decarboxylase L3V65_11595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3V65_11595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3V65_11595 PF00205 Thiamine pyrophosphate enzyme, central domain L3V65_11600 PF03466 LysR substrate binding domain L3V65_11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_11605 PF13545 Crp-like helix-turn-helix domain L3V65_11605 PF00027 Cyclic nucleotide-binding domain L3V65_11610 PF01475 Ferric uptake regulator family L3V65_11615 PF01923 Cobalamin adenosyltransferase L3V65_11620 PF07885 Ion channel L3V65_11625 PF00202 Aminotransferase class-III L3V65_11630 PF10942 Protein of unknown function (DUF2619) L3V65_11635 PF06081 Aromatic acid exporter family member 1 L3V65_11640 PF01380 SIS domain L3V65_11640 PF01418 Helix-turn-helix domain, rpiR family L3V65_11645 PF00367 phosphotransferase system, EIIB L3V65_11645 PF02378 Phosphotransferase system, EIIC L3V65_11650 PF01380 SIS domain L3V65_11660 PF00664 ABC transporter transmembrane region L3V65_11660 PF00005 ABC transporter L3V65_11665 PF04167 Protein of unknown function (DUF402) L3V65_11670 PF14182 YgaB-like protein L3V65_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_11685 PF03466 LysR substrate binding domain L3V65_11690 PF00310 Glutamine amidotransferases class-II L3V65_11690 PF04898 Glutamate synthase central domain L3V65_11690 PF01645 Conserved region in glutamate synthase L3V65_11690 PF01493 GXGXG motif L3V65_11695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L3V65_11695 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_11715 PF08176 Small acid-soluble spore protein K family L3V65_11720 PF04307 LexA-binding, inner membrane-associated putative hydrolase L3V65_11725 PF00730 HhH-GPD superfamily base excision DNA repair protein L3V65_11725 PF14815 NUDIX domain L3V65_11730 PF08838 Protein of unknown function (DUF1811) L3V65_11735 PF02631 RecX family L3V65_11745 PF14151 YfhD-like protein L3V65_11750 PF00290 Tryptophan synthase alpha chain L3V65_11760 PF00291 Pyridoxal-phosphate dependent enzyme L3V65_11765 PF00218 Indole-3-glycerol phosphate synthase L3V65_11770 PF00591 Glycosyl transferase family, a/b domain L3V65_11770 PF02885 Glycosyl transferase family, helical bundle domain L3V65_11775 PF00117 Glutamine amidotransferase class-I L3V65_11775 PF00591 Glycosyl transferase family, a/b domain L3V65_11775 PF02885 Glycosyl transferase family, helical bundle domain L3V65_11780 PF04715 Anthranilate synthase component I, N terminal region L3V65_11780 PF00425 chorismate binding enzyme L3V65_11785 PF02687 FtsX-like permease family L3V65_11785 PF12704 MacB-like periplasmic core domain L3V65_11790 PF00005 ABC transporter L3V65_11790 PF02687 FtsX-like permease family L3V65_11790 PF12704 MacB-like periplasmic core domain L3V65_11870 PF00005 ABC transporter L3V65_11870 PF02687 FtsX-like permease family L3V65_11870 PF12704 MacB-like periplasmic core domain L3V65_11875 PF00343 Carbohydrate phosphorylase L3V65_11880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_11880 PF00672 HAMP domain L3V65_11880 PF02743 Cache domain L3V65_11885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3V65_11885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3V65_11890 PF00266 Aminotransferase class-V L3V65_11895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3V65_11895 PF01842 ACT domain L3V65_11895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3V65_11910 PF00291 Pyridoxal-phosphate dependent enzyme L3V65_11910 PF13291 ACT domain L3V65_11915 PF00694 Aconitase C-terminal domain L3V65_11920 PF00330 Aconitase family (aconitate hydratase) L3V65_11925 PF00180 Isocitrate/isopropylmalate dehydrogenase L3V65_11930 PF00682 HMGL-like L3V65_11930 PF08502 LeuA allosteric (dimerisation) domain L3V65_11935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L3V65_11935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L3V65_11940 PF10369 Small subunit of acetolactate synthase L3V65_11940 PF01842 ACT domain L3V65_11945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3V65_11945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3V65_11945 PF00205 Thiamine pyrophosphate enzyme, central domain L3V65_11955 PF05525 Branched-chain amino acid transport protein L3V65_11960 PF01740 STAS domain L3V65_11970 PF00067 Cytochrome P450 L3V65_11975 PF01027 Inhibitor of apoptosis-promoting Bax1 L3V65_11980 PF01717 Cobalamin-independent synthase, Catalytic domain L3V65_11985 PF07690 Major Facilitator Superfamily L3V65_11990 PF04397 LytTr DNA-binding domain L3V65_11990 PF00072 Response regulator receiver domain L3V65_11995 PF07694 5TMR of 5TMR-LYT L3V65_11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_11995 PF06580 Histidine kinase L3V65_12005 PF07732 Multicopper oxidase L3V65_12005 PF07731 Multicopper oxidase L3V65_12005 PF00394 Multicopper oxidase L3V65_12010 PF00394 Multicopper oxidase L3V65_12010 PF07731 Multicopper oxidase L3V65_12010 PF07732 Multicopper oxidase L3V65_12015 PF17932 Tetracyclin repressor-like, C-terminal domain L3V65_12015 PF00440 Bacterial regulatory proteins, tetR family L3V65_12045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_12045 PF00672 HAMP domain L3V65_12050 PF05675 Protein of unknown function (DUF817) L3V65_12055 PF13443 Cro/C1-type HTH DNA-binding domain L3V65_12060 PF11188 Protein of unknown function (DUF2975) L3V65_12070 PF00375 Sodium:dicarboxylate symporter family L3V65_12075 PF04306 Protein of unknown function (DUF456) L3V65_12095 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) L3V65_12100 PF01207 Dihydrouridine synthase (Dus) L3V65_12110 PF00664 ABC transporter transmembrane region L3V65_12110 PF00005 ABC transporter L3V65_12115 PF01047 MarR family L3V65_12120 PF01938 TRAM domain L3V65_12120 PF05958 tRNA (Uracil-5-)-methyltransferase L3V65_12125 PF00730 HhH-GPD superfamily base excision DNA repair protein L3V65_12130 PF01522 Polysaccharide deacetylase L3V65_12145 PF14167 YfkD-like protein L3V65_12150 PF01699 Sodium/calcium exchanger protein L3V65_12155 PF07690 Major Facilitator Superfamily L3V65_12160 PF03631 Virulence factor BrkB L3V65_12165 PF06569 Protein of unknown function (DUF1128) L3V65_12170 PF00557 Metallopeptidase family M24 L3V65_12175 PF01965 DJ-1/PfpI family L3V65_12180 PF13677 Membrane MotB of proton-channel complex MotA/MotB L3V65_12180 PF00691 OmpA family L3V65_12185 PF01618 MotA/TolQ/ExbB proton channel family L3V65_12190 PF09350 Domain of unknown function (DUF1992) L3V65_12200 PF04343 Protein of unknown function, DUF488 L3V65_12205 PF07690 Major Facilitator Superfamily L3V65_12210 PF01258 Prokaryotic dksA/traR C4-type zinc finger L3V65_12215 PF03061 Thioesterase superfamily L3V65_12225 PF01145 SPFH domain / Band 7 family L3V65_12225 PF15975 Flotillin L3V65_12235 PF01053 Cys/Met metabolism PLP-dependent enzyme L3V65_12240 PF00291 Pyridoxal-phosphate dependent enzyme L3V65_12245 PF02664 S-Ribosylhomocysteinase (LuxS) L3V65_12250 PF08241 Methyltransferase domain L3V65_12255 PF00484 Carbonic anhydrase L3V65_12260 PF01520 N-acetylmuramoyl-L-alanine amidase L3V65_12260 PF05036 Sporulation related domain L3V65_12270 PF00072 Response regulator receiver domain L3V65_12270 PF00196 Bacterial regulatory proteins, luxR family L3V65_12295 PF06207 Protein of unknown function (DUF1002) L3V65_12300 PF01380 SIS domain L3V65_12300 PF01418 Helix-turn-helix domain, rpiR family L3V65_12305 PF02872 5'-nucleotidase, C-terminal domain L3V65_12305 PF00149 Calcineurin-like phosphoesterase L3V65_12310 PF00375 Sodium:dicarboxylate symporter family L3V65_12315 PF00300 Histidine phosphatase superfamily (branch 1) L3V65_12320 PF01381 Helix-turn-helix L3V65_12335 PF09827 CRISPR associated protein Cas2 L3V65_12340 PF01867 CRISPR associated protein Cas1 L3V65_12360 PF09704 CRISPR-associated protein (Cas_Cas5) L3V65_12370 PF00176 SNF2 family N-terminal domain L3V65_12370 PF04434 SWIM zinc finger L3V65_12370 PF00271 Helicase conserved C-terminal domain L3V65_12375 PF00881 Nitroreductase family L3V65_12385 PF01070 FMN-dependent dehydrogenase L3V65_12390 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase L3V65_12395 PF12728 Helix-turn-helix domain L3V65_12400 PF00999 Sodium/hydrogen exchanger family L3V65_12405 PF00999 Sodium/hydrogen exchanger family L3V65_12410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3V65_12410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3V65_12415 PF00455 DeoR C terminal sensor domain L3V65_12415 PF08220 DeoR-like helix-turn-helix domain L3V65_12420 PF00465 Iron-containing alcohol dehydrogenase L3V65_12425 PF01814 Hemerythrin HHE cation binding domain L3V65_12425 PF04405 Domain of Unknown function (DUF542) L3V65_12445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_12455 PF04055 Radical SAM superfamily L3V65_12465 PF17370 Family of unknown function (DUF5392) L3V65_12475 PF00202 Aminotransferase class-III L3V65_12480 PF03610 PTS system fructose IIA component L3V65_12485 PF02734 DAK2 domain L3V65_12490 PF02733 Dak1 domain L3V65_12500 PF00881 Nitroreductase family L3V65_12505 PF00324 Amino acid permease L3V65_12510 PF01925 Sulfite exporter TauE/SafE L3V65_12515 PF00860 Permease family L3V65_12520 PF13361 UvrD-like helicase C-terminal domain L3V65_12520 PF00580 UvrD/REP helicase N-terminal domain L3V65_12525 PF00253 Ribosomal protein S14p/S29e L3V65_12530 PF01076 Plasmid recombination enzyme L3V65_12540 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3V65_12550 PF00202 Aminotransferase class-III L3V65_12555 PF02954 Bacterial regulatory protein, Fis family L3V65_12555 PF13426 PAS domain L3V65_12555 PF00158 Sigma-54 interaction domain L3V65_12560 PF01420 Type I restriction modification DNA specificity domain L3V65_12565 PF02384 N-6 DNA Methylase L3V65_12575 PF04851 Type III restriction enzyme, res subunit L3V65_12575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L3V65_12575 PF00271 Helicase conserved C-terminal domain L3V65_12575 PF08463 EcoEI R protein C-terminal L3V65_12580 PF00324 Amino acid permease L3V65_12600 PF00005 ABC transporter L3V65_12605 PF00274 Fructose-bisphosphate aldolase class-I L3V65_12615 PF01810 LysE type translocator L3V65_12620 PF00255 Glutathione peroxidase L3V65_12625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_12640 PF08892 YqcI/YcgG family L3V65_12650 PF00589 Phage integrase family L3V65_12655 PF00403 Heavy-metal-associated domain L3V65_12660 PF01022 Bacterial regulatory protein, arsR family L3V65_12685 PF18766 SWI2/SNF2 ATPase L3V65_12685 PF11867 Domain of unknown function (DUF3387) L3V65_12685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L3V65_12690 PF01420 Type I restriction modification DNA specificity domain L3V65_12695 PF12161 HsdM N-terminal domain L3V65_12695 PF02384 N-6 DNA Methylase L3V65_12700 PF00375 Sodium:dicarboxylate symporter family L3V65_12710 PF04055 Radical SAM superfamily L3V65_12715 PF13597 Anaerobic ribonucleoside-triphosphate reductase L3V65_12715 PF03477 ATP cone domain L3V65_12725 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_12725 PF00107 Zinc-binding dehydrogenase L3V65_12730 PF02595 Glycerate kinase family L3V65_12745 PF00795 Carbon-nitrogen hydrolase L3V65_12750 PF00155 Aminotransferase class I and II L3V65_12765 PF07987 Domain of unkown function (DUF1775) L3V65_12770 PF04234 CopC domain L3V65_12770 PF13115 YtkA-like L3V65_12770 PF05425 Copper resistance protein D L3V65_12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_12780 PF13426 PAS domain L3V65_12780 PF13188 PAS domain L3V65_12780 PF00512 His Kinase A (phospho-acceptor) domain L3V65_12780 PF00989 PAS fold L3V65_12785 PF00109 Beta-ketoacyl synthase, N-terminal domain L3V65_12785 PF02801 Beta-ketoacyl synthase, C-terminal domain L3V65_12790 PF00313 'Cold-shock' DNA-binding domain L3V65_12820 PF00144 Beta-lactamase L3V65_12825 PF07075 Protein of unknown function (DUF1343) L3V65_12830 PF00005 ABC transporter L3V65_12830 PF00664 ABC transporter transmembrane region L3V65_12835 PF00664 ABC transporter transmembrane region L3V65_12835 PF00005 ABC transporter L3V65_12845 PF00455 DeoR C terminal sensor domain L3V65_12845 PF08220 DeoR-like helix-turn-helix domain L3V65_12850 PF01261 Xylose isomerase-like TIM barrel L3V65_12855 PF01261 Xylose isomerase-like TIM barrel L3V65_12860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3V65_12860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3V65_12865 PF00083 Sugar (and other) transporter L3V65_12870 PF01261 Xylose isomerase-like TIM barrel L3V65_12890 PF01261 Xylose isomerase-like TIM barrel L3V65_12910 PF07690 Major Facilitator Superfamily L3V65_12915 PF01116 Fructose-bisphosphate aldolase class-II L3V65_12920 PF00205 Thiamine pyrophosphate enzyme, central domain L3V65_12920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3V65_12920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3V65_12925 PF00294 pfkB family carbohydrate kinase L3V65_12930 PF04962 KduI/IolB family L3V65_12935 PF00171 Aldehyde dehydrogenase family L3V65_12940 PF00877 NlpC/P60 family L3V65_12940 PF01476 LysM domain L3V65_12975 PF00583 Acetyltransferase (GNAT) family L3V65_12975 PF00795 Carbon-nitrogen hydrolase L3V65_12995 PF00478 IMP dehydrogenase / GMP reductase domain L3V65_13000 PF01717 Cobalamin-independent synthase, Catalytic domain L3V65_13000 PF08267 Cobalamin-independent synthase, N-terminal domain L3V65_13005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3V65_13010 PF01791 DeoC/LacD family aldolase L3V65_13015 PF02885 Glycosyl transferase family, helical bundle domain L3V65_13015 PF00591 Glycosyl transferase family, a/b domain L3V65_13015 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L3V65_13020 PF01676 Metalloenzyme superfamily L3V65_13030 PF01048 Phosphorylase superfamily L3V65_13035 PF01773 Na+ dependent nucleoside transporter N-terminus L3V65_13035 PF07662 Na+ dependent nucleoside transporter C-terminus L3V65_13040 PF00860 Permease family L3V65_13045 PF01470 Pyroglutamyl peptidase L3V65_13060 PF03746 LamB/YcsF family L3V65_13065 PF02626 Carboxyltransferase domain, subdomain A and B L3V65_13070 PF02682 Carboxyltransferase domain, subdomain C and D L3V65_13075 PF01385 Probable transposase L3V65_13075 PF12323 Helix-turn-helix domain L3V65_13075 PF07282 Putative transposase DNA-binding domain L3V65_13085 PF07690 Major Facilitator Superfamily L3V65_13090 PF02566 OsmC-like protein L3V65_13095 PF00005 ABC transporter L3V65_13100 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_13105 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3V65_13110 PF01546 Peptidase family M20/M25/M40 L3V65_13110 PF07687 Peptidase dimerisation domain L3V65_13115 PF00183 Hsp90 protein L3V65_13140 PF01266 FAD dependent oxidoreductase L3V65_13150 PF00107 Zinc-binding dehydrogenase L3V65_13150 PF08240 Alcohol dehydrogenase GroES-like domain L3V65_13170 PF04740 LXG domain of WXG superfamily L3V65_13215 PF10548 P22AR C-terminal domain L3V65_13215 PF08346 AntA/AntB antirepressor L3V65_13220 PF13411 MerR HTH family regulatory protein L3V65_13230 PF01612 3'-5' exonuclease L3V65_13230 PF00476 DNA polymerase family A L3V65_13230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3V65_13230 PF01367 5'-3' exonuclease, C-terminal SAM fold L3V65_13270 PF07883 Cupin domain L3V65_13275 PF00535 Glycosyl transferase family 2 L3V65_13280 PF01695 IstB-like ATP binding protein L3V65_13285 PF00665 Integrase core domain L3V65_13295 PF00665 Integrase core domain L3V65_13320 PF13005 zinc-finger binding domain of transposase IS66 L3V65_13320 PF13817 IS66 C-terminal element L3V65_13320 PF13007 Transposase C of IS166 homeodomain L3V65_13320 PF03050 Transposase IS66 family L3V65_13325 PF02475 Met-10+ like-protein L3V65_13325 PF01938 TRAM domain L3V65_13325 PF05958 tRNA (Uracil-5-)-methyltransferase L3V65_13330 PF00474 Sodium:solute symporter family L3V65_13335 PF00781 Diacylglycerol kinase catalytic domain L3V65_13360 PF02637 GatB domain L3V65_13360 PF02934 GatB/GatE catalytic domain L3V65_13365 PF01425 Amidase L3V65_13370 PF02686 Glu-tRNAGln amidotransferase C subunit L3V65_13375 PF00463 Isocitrate lyase family L3V65_13380 PF01274 Malate synthase L3V65_13385 PF07537 CamS sex pheromone cAM373 precursor L3V65_13390 PF01653 NAD-dependent DNA ligase adenylation domain L3V65_13390 PF12826 Helix-hairpin-helix motif L3V65_13390 PF00533 BRCA1 C Terminus (BRCT) domain L3V65_13390 PF03120 NAD-dependent DNA ligase OB-fold domain L3V65_13390 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L3V65_13395 PF13361 UvrD-like helicase C-terminal domain L3V65_13395 PF00580 UvrD/REP helicase N-terminal domain L3V65_13400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L3V65_13410 PF01884 PcrB family L3V65_13415 PF01371 Trp repressor protein L3V65_13420 PF17479 Protein of unknown function (DUF3048) C-terminal domain L3V65_13420 PF11258 Protein of unknown function (DUF3048) N-terminal domain L3V65_13425 PF13382 Adenine deaminase C-terminal domain L3V65_13425 PF01979 Amidohydrolase family L3V65_13435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L3V65_13435 PF02843 Phosphoribosylglycinamide synthetase, C domain L3V65_13435 PF02844 Phosphoribosylglycinamide synthetase, N domain L3V65_13440 PF01808 AICARFT/IMPCHase bienzyme L3V65_13440 PF02142 MGS-like domain L3V65_13445 PF00551 Formyl transferase L3V65_13450 PF00586 AIR synthase related protein, N-terminal domain L3V65_13450 PF02769 AIR synthase related protein, C-terminal domain L3V65_13455 PF00156 Phosphoribosyl transferase domain L3V65_13460 PF00586 AIR synthase related protein, N-terminal domain L3V65_13460 PF02769 AIR synthase related protein, C-terminal domain L3V65_13460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L3V65_13470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase L3V65_13475 PF01259 SAICAR synthetase L3V65_13480 PF10397 Adenylosuccinate lyase C-terminus L3V65_13480 PF00206 Lyase L3V65_13485 PF02222 ATP-grasp domain L3V65_13485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L3V65_13490 PF00731 AIR carboxylase L3V65_13500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L3V65_13505 PF01323 DSBA-like thioredoxin domain L3V65_13510 PF00367 phosphotransferase system, EIIB L3V65_13510 PF02378 Phosphotransferase system, EIIC L3V65_13510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_13535 PF00367 phosphotransferase system, EIIB L3V65_13535 PF02378 Phosphotransferase system, EIIC L3V65_13540 PF02056 Family 4 glycosyl hydrolase L3V65_13540 PF11975 Family 4 glycosyl hydrolase C-terminal domain L3V65_13560 PF00375 Sodium:dicarboxylate symporter family L3V65_13565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L3V65_13565 PF00367 phosphotransferase system, EIIB L3V65_13565 PF02378 Phosphotransferase system, EIIC L3V65_13570 PF00874 PRD domain L3V65_13570 PF03123 CAT RNA binding domain L3V65_13575 PF00860 Permease family L3V65_13590 PF07690 Major Facilitator Superfamily L3V65_13610 PF00939 Sodium:sulfate symporter transmembrane region L3V65_13635 PF00005 ABC transporter L3V65_13640 PF00392 Bacterial regulatory proteins, gntR family L3V65_13675 PF01206 Sulfurtransferase TusA L3V65_13680 PF04143 Sulphur transport L3V65_13700 PF17340 Family of unknown function (DUF5370) L3V65_13710 PF00005 ABC transporter L3V65_13715 PF01032 FecCD transport family L3V65_13730 PF07690 Major Facilitator Superfamily L3V65_13740 PF00082 Subtilase family L3V65_13765 PF01381 Helix-turn-helix L3V65_13780 PF00958 GMP synthase C terminal domain L3V65_13780 PF02540 NAD synthase L3V65_13780 PF00117 Glutamine amidotransferase class-I L3V65_13785 PF02540 NAD synthase L3V65_13790 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L3V65_13790 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain L3V65_13790 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L3V65_13795 PF00857 Isochorismatase family L3V65_13800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3V65_13800 PF13378 Enolase C-terminal domain-like L3V65_13810 PF00535 Glycosyl transferase family 2 L3V65_13815 PF04138 GtrA-like protein L3V65_13820 PF00118 TCP-1/cpn60 chaperonin family L3V65_13825 PF00166 Chaperonin 10 Kd subunit L3V65_13830 PF02517 CPBP intramembrane metalloprotease L3V65_13840 PF00902 Sec-independent protein translocase protein (TatC) L3V65_13845 PF02629 CoA binding domain L3V65_13845 PF06971 Putative DNA-binding protein N-terminus L3V65_13850 PF12848 ABC transporter L3V65_13850 PF16326 ABC transporter C-terminal domain L3V65_13850 PF00005 ABC transporter L3V65_13855 PF00814 Glycoprotease family L3V65_13860 PF00583 Acetyltransferase (GNAT) family L3V65_13865 PF00814 Glycoprotease family L3V65_13870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L3V65_13960 PF17283 SprT-like zinc ribbon domain L3V65_13960 PF10263 SprT-like family L3V65_13970 PF00575 S1 RNA binding domain L3V65_13970 PF17674 HHH domain L3V65_13970 PF16921 Tex protein YqgF-like domain L3V65_13970 PF09371 Tex-like protein N-terminal domain L3V65_13975 PF07228 Stage II sporulation protein E (SpoIIE) L3V65_13985 PF13581 Histidine kinase-like ATPase domain L3V65_13990 PF01740 STAS domain L3V65_13995 PF07228 Stage II sporulation protein E (SpoIIE) L3V65_13995 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain L3V65_14000 PF13581 Histidine kinase-like ATPase domain L3V65_14005 PF01740 STAS domain L3V65_14010 PF01740 STAS domain L3V65_14010 PF08678 Rsbr N terminal L3V65_14015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system L3V65_14020 PF01402 Ribbon-helix-helix protein, copG family L3V65_14025 PF01168 Alanine racemase, N-terminal domain L3V65_14025 PF00842 Alanine racemase, C-terminal domain L3V65_14035 PF01648 4'-phosphopantetheinyl transferase superfamily L3V65_14040 PF01694 Rhomboid family L3V65_14045 PF00271 Helicase conserved C-terminal domain L3V65_14045 PF00270 DEAD/DEAH box helicase L3V65_14050 PF01810 LysE type translocator L3V65_14055 PF13419 Haloacid dehalogenase-like hydrolase L3V65_14060 PF00356 Bacterial regulatory proteins, lacI family L3V65_14065 PF00128 Alpha amylase, catalytic domain L3V65_14070 PF02903 Alpha amylase, N-terminal ig-like domain L3V65_14070 PF00128 Alpha amylase, catalytic domain L3V65_14075 PF13416 Bacterial extracellular solute-binding protein L3V65_14080 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_14085 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_14090 PF06691 Protein of unknown function (DUF1189) L3V65_14095 PF03636 Glycosyl hydrolase family 65, N-terminal domain L3V65_14095 PF03632 Glycosyl hydrolase family 65 central catalytic domain L3V65_14095 PF03633 Glycosyl hydrolase family 65, C-terminal domain L3V65_14100 PF16657 Maltogenic Amylase, C-terminal domain L3V65_14100 PF00128 Alpha amylase, catalytic domain L3V65_14105 PF08245 Mur ligase middle domain L3V65_14105 PF02875 Mur ligase family, glutamate ligase domain L3V65_14105 PF01225 Mur ligase family, catalytic domain L3V65_14110 PF07478 D-ala D-ala ligase C-terminus L3V65_14110 PF01820 D-ala D-ala ligase N-terminus L3V65_14120 PF00571 CBS domain L3V65_14120 PF01595 Cyclin M transmembrane N-terminal domain L3V65_14120 PF03471 Transporter associated domain L3V65_14125 PF13411 MerR HTH family regulatory protein L3V65_14130 PF01595 Cyclin M transmembrane N-terminal domain L3V65_14130 PF03471 Transporter associated domain L3V65_14130 PF00571 CBS domain L3V65_14140 PF04434 SWIM zinc finger L3V65_14145 PF00176 SNF2 family N-terminal domain L3V65_14145 PF12419 SNF2 Helicase protein L3V65_14145 PF00271 Helicase conserved C-terminal domain L3V65_14155 PF14183 YwpF-like protein L3V65_14160 PF00436 Single-strand binding protein family L3V65_14170 PF07977 FabA-like domain L3V65_14175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3V65_14175 PF00460 Flagella basal body rod protein L3V65_14180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3V65_14180 PF00460 Flagella basal body rod protein L3V65_14190 PF12116 Stage III sporulation protein D L3V65_14195 PF01551 Peptidase family M23 L3V65_14200 PF08486 Stage II sporulation protein L3V65_14205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3V65_14215 PF06612 Protein of unknown function (DUF1146) L3V65_14220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L3V65_14220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L3V65_14225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3V65_14225 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3V65_14230 PF00231 ATP synthase L3V65_14235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3V65_14235 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3V65_14235 PF00306 ATP synthase alpha/beta chain, C terminal domain L3V65_14240 PF00213 ATP synthase delta (OSCP) subunit L3V65_14245 PF00430 ATP synthase B/B' CF(0) L3V65_14250 PF00137 ATP synthase subunit C L3V65_14255 PF00119 ATP synthase A chain L3V65_14260 PF03899 ATP synthase I chain L3V65_14270 PF00464 Serine hydroxymethyltransferase L3V65_14275 PF04260 Protein of unknown function (DUF436) L3V65_14280 PF02502 Ribose/Galactose Isomerase L3V65_14285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_14285 PF02743 Cache domain L3V65_14285 PF00672 HAMP domain L3V65_14290 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3V65_14320 PF02659 Putative manganese efflux pump L3V65_14325 PF01300 Telomere recombination L3V65_14325 PF03481 Putative GTP-binding controlling metal-binding L3V65_14330 PF09551 Stage II sporulation protein R (spore_II_R) L3V65_14335 PF17827 PrmC N-terminal domain L3V65_14335 PF13847 Methyltransferase domain L3V65_14340 PF03462 PCRF domain L3V65_14340 PF00472 RF-1 domain L3V65_14350 PF00265 Thymidine kinase L3V65_14355 PF01197 Ribosomal protein L31 L3V65_14360 PF07498 Rho termination factor, N-terminal domain L3V65_14360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3V65_14360 PF07497 Rho termination factor, RNA-binding domain L3V65_14365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L3V65_14370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3V65_14375 PF00923 Transaldolase/Fructose-6-phosphate aldolase L3V65_14380 PF01116 Fructose-bisphosphate aldolase class-II L3V65_14385 PF00072 Response regulator receiver domain L3V65_14400 PF00005 ABC transporter L3V65_14405 PF00392 Bacterial regulatory proteins, gntR family L3V65_14410 PF00117 Glutamine amidotransferase class-I L3V65_14410 PF06418 CTP synthase N-terminus L3V65_14415 PF05066 HB1, ASXL, restriction endonuclease HTH domain L3V65_14430 PF00005 ABC transporter L3V65_14460 PF08359 YsiA-like protein, C-terminal region L3V65_14460 PF00440 Bacterial regulatory proteins, tetR family L3V65_14465 PF02770 Acyl-CoA dehydrogenase, middle domain L3V65_14465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3V65_14465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3V65_14470 PF02770 Acyl-CoA dehydrogenase, middle domain L3V65_14470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3V65_14470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3V65_14475 PF00108 Thiolase, N-terminal domain L3V65_14475 PF02803 Thiolase, C-terminal domain L3V65_14480 PF13183 4Fe-4S dicluster domain L3V65_14480 PF02754 Cysteine-rich domain L3V65_14485 PF13091 PLD-like domain L3V65_14490 PF03485 Arginyl tRNA synthetase N terminal domain L3V65_14490 PF05746 DALR anticodon binding domain L3V65_14490 PF00750 tRNA synthetases class I (R) L3V65_14500 PF00491 Arginase family L3V65_14505 PF00905 Penicillin binding protein transpeptidase domain L3V65_14505 PF00912 Transglycosylase L3V65_14510 PF08741 YwhD family L3V65_14515 PF02163 Peptidase family M50 L3V65_14520 PF01361 Tautomerase enzyme L3V65_14530 PF01966 HD domain L3V65_14540 PF03099 Biotin/lipoate A/B protein ligase family L3V65_14550 PF01515 Phosphate acetyl/butaryl transferase L3V65_14555 PF06778 Chlorite dismutase L3V65_14560 PF09671 Spore coat protein (Spore_GerQ) L3V65_14570 PF04241 Protein of unknown function (DUF423) L3V65_14575 PF17261 Family of unknown function (DUF5327) L3V65_14580 PF03167 Uracil DNA glycosylase superfamily L3V65_14585 PF11181 Heat induced stress protein YflT L3V65_14610 PF00005 ABC transporter L3V65_14615 PF08543 Phosphomethylpyrimidine kinase L3V65_14625 PF02585 GlcNAc-PI de-N-acetylase L3V65_14635 PF00270 DEAD/DEAH box helicase L3V65_14635 PF00271 Helicase conserved C-terminal domain L3V65_14635 PF16124 RecQ zinc-binding L3V65_14635 PF09382 RQC domain L3V65_14635 PF00570 HRDC domain L3V65_14640 PF00245 Alkaline phosphatase L3V65_14645 PF01418 Helix-turn-helix domain, rpiR family L3V65_14645 PF01380 SIS domain L3V65_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_14660 PF00512 His Kinase A (phospho-acceptor) domain L3V65_14660 PF00989 PAS fold L3V65_14660 PF16736 Single Cache-like L3V65_14670 PF00072 Response regulator receiver domain L3V65_14670 PF00486 Transcriptional regulatory protein, C terminal L3V65_14680 PF04073 Aminoacyl-tRNA editing domain L3V65_14690 PF04172 LrgB-like family L3V65_14695 PF03788 LrgA family L3V65_14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3V65_14700 PF03466 LysR substrate binding domain L3V65_14705 PF00733 Asparagine synthase L3V65_14705 PF13537 Glutamine amidotransferase domain L3V65_14765 PF06738 Putative threonine/serine exporter L3V65_14770 PF01063 Amino-transferase class IV L3V65_14775 PF13722 5TM C-terminal transporter carbon starvation CstA L3V65_14775 PF02554 Carbon starvation protein CstA L3V65_14780 PF03180 NLPA lipoprotein L3V65_14785 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_14790 PF00005 ABC transporter L3V65_14790 PF09383 NIL domain L3V65_14795 PF00005 ABC transporter L3V65_14810 PF01554 MatE L3V65_14815 PF01501 Glycosyl transferase family 8 L3V65_14815 PF08437 Glycosyl transferase family 8 C-terminal L3V65_14820 PF07687 Peptidase dimerisation domain L3V65_14820 PF01546 Peptidase family M20/M25/M40 L3V65_14840 PF00082 Subtilase family L3V65_14855 PF00860 Permease family L3V65_14860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3V65_14860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3V65_14860 PF00205 Thiamine pyrophosphate enzyme, central domain L3V65_14875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3V65_14885 PF00664 ABC transporter transmembrane region L3V65_14885 PF00005 ABC transporter L3V65_14895 PF14489 QueF-like protein L3V65_14900 PF03176 MMPL family L3V65_14905 PF09154 Domain of unknown function (DUF1939) L3V65_14905 PF00128 Alpha amylase, catalytic domain L3V65_14915 PF01740 STAS domain L3V65_14920 PF03435 Saccharopine dehydrogenase NADP binding domain L3V65_14920 PF16653 Saccharopine dehydrogenase C-terminal domain L3V65_14925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3V65_14935 PF01168 Alanine racemase, N-terminal domain L3V65_14940 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3V65_14955 PF00528 Binding-protein-dependent transport system inner membrane component L3V65_14960 PF06039 Malate:quinone oxidoreductase (Mqo) L3V65_14970 PF18766 SWI2/SNF2 ATPase L3V65_14970 PF11867 Domain of unknown function (DUF3387) L3V65_14970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L3V65_14975 PF01420 Type I restriction modification DNA specificity domain L3V65_14980 PF02384 N-6 DNA Methylase L3V65_14995 PF13180 PDZ domain L3V65_15000 PF00753 Metallo-beta-lactamase superfamily L3V65_15005 PF07435 YycH protein L3V65_15010 PF00672 HAMP domain L3V65_15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3V65_15010 PF00512 His Kinase A (phospho-acceptor) domain L3V65_15010 PF13426 PAS domain L3V65_15015 PF00486 Transcriptional regulatory protein, C terminal L3V65_15015 PF00072 Response regulator receiver domain L3V65_15030 PF00709 Adenylosuccinate synthetase L3V65_15035 PF00772 DnaB-like helicase N terminal domain L3V65_15035 PF03796 DnaB-like helicase C terminal domain L3V65_15040 PF03948 Ribosomal protein L9, C-terminal domain L3V65_15040 PF01281 Ribosomal protein L9, N-terminal domain L3V65_15045 PF01368 DHH family L3V65_15045 PF02272 DHHA1 domain L3V65_15055 PF01084 Ribosomal protein S18 L3V65_15060 PF00436 Single-strand binding protein family L3V65_15065 PF01250 Ribosomal protein S6 L3V65_15070 PF00885 6,7-dimethyl-8-ribityllumazine synthase L3V65_15075 PF00925 GTP cyclohydrolase II L3V65_15075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L3V65_15080 PF00677 Lumazine binding domain L3V65_15085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3V65_15085 PF01872 RibD C-terminal domain L3V65_15090 PF01926 50S ribosome-binding GTPase L3V65_15090 PF06071 Protein of unknown function (DUF933) L3V65_15095 PF06107 Bacterial protein of unknown function (DUF951) L3V65_15100 PF00924 Mechanosensitive ion channel L3V65_15105 PF06866 Protein of unknown function (DUF1256) L3V65_15110 PF04474 Protein of unknown function (DUF554) L3V65_15115 PF02195 ParB-like nuclease domain L3V65_15115 PF17762 HTH domain found in ParB protein L3V65_15120 PF13614 AAA domain L3V65_15125 PF17762 HTH domain found in ParB protein L3V65_15125 PF02195 ParB-like nuclease domain L3V65_15130 PF02527 rRNA small subunit methyltransferase G L3V65_15135 PF01134 Glucose inhibited division protein A L3V65_15135 PF13932 GidA associated domain L3V65_15140 PF01926 50S ribosome-binding GTPase L3V65_15140 PF12631 MnmE helical domain L3V65_15140 PF10396 GTP-binding protein TrmE N-terminus L3V65_15145 PF14804 Jag N-terminus L3V65_15145 PF01424 R3H domain L3V65_15150 PF02096 60Kd inner membrane protein L3V65_15155 PF00825 Ribonuclease P L3V65_15160 PF00468 Ribosomal protein L34