locus-tag class description KNH48_00005 PF00308 Bacterial dnaA protein KNH48_00005 PF08299 Bacterial dnaA protein helix-turn-helix KNH48_00005 PF11638 DnaA N-terminal domain KNH48_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KNH48_00010 PF02767 DNA polymerase III beta subunit, central domain KNH48_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KNH48_00020 PF02463 RecF/RecN/SMC N terminal domain KNH48_00030 PF00204 DNA gyrase B KNH48_00030 PF00986 DNA gyrase B subunit, carboxyl terminus KNH48_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_00030 PF01751 Toprim domain KNH48_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller KNH48_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A KNH48_00040 PF00072 Response regulator receiver domain KNH48_00065 PF10764 Inhibitor of sigma-G Gin KNH48_00070 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KNH48_00070 PF01276 Orn/Lys/Arg decarboxylase, major domain KNH48_00075 PF02223 Thymidylate kinase KNH48_00080 PF06153 Cyclic-di-AMP receptor KNH48_00085 PF03885 Protein of unknown function (DUF327) KNH48_00090 PF09115 DNA polymerase III, delta subunit, C terminal KNH48_00095 PF04468 PSP1 C-terminal conserved region KNH48_00100 PF06156 Initiation control protein YabA KNH48_00105 PF05175 Methyltransferase small domain KNH48_00110 PF01541 GIY-YIG catalytic domain KNH48_00115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KNH48_00120 PF18277 AbrB C-terminal domain KNH48_00120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KNH48_00125 PF08264 Anticodon-binding domain of tRNA KNH48_00125 PF09334 tRNA synthetases class I (M) KNH48_00125 PF01588 Putative tRNA binding domain KNH48_00130 PF01026 TatD related DNase KNH48_00135 PF13331 Domain of unknown function (DUF4093) KNH48_00135 PF13662 Toprim domain KNH48_00140 PF00398 Ribosomal RNA adenine dimethylase KNH48_00145 PF05582 YabG peptidase U57 KNH48_00150 PF06257 Biofilm formation stimulator VEG KNH48_00155 PF00269 Small, acid-soluble spore proteins, alpha/beta type KNH48_00170 PF01042 Endoribonuclease L-PSP KNH48_00185 PF00483 Nucleotidyl transferase KNH48_00185 PF00132 Bacterial transferase hexapeptide (six repeats) KNH48_00190 PF14572 Phosphoribosyl synthetase-associated domain KNH48_00190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KNH48_00195 PF01386 Ribosomal L25p family KNH48_00195 PF14693 Ribosomal protein TL5, C-terminal domain KNH48_00200 PF01195 Peptidyl-tRNA hydrolase KNH48_00205 PF10955 Protein of unknown function (DUF2757) KNH48_00210 PF17757 UvrB interaction domain KNH48_00210 PF03461 TRCF domain KNH48_00210 PF02559 CarD-like/TRCF domain KNH48_00210 PF00270 DEAD/DEAH box helicase KNH48_00210 PF00271 Helicase conserved C-terminal domain KNH48_00215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KNH48_00215 PF15714 Stage V sporulation protein T C-terminal, transcription factor KNH48_00220 PF01943 Polysaccharide biosynthesis protein KNH48_00220 PF14667 Polysaccharide biosynthesis C-terminal domain KNH48_00225 PF03819 MazG nucleotide pyrophosphohydrolase domain KNH48_00225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KNH48_00230 PF01479 S4 domain KNH48_00235 PF07873 YabP family KNH48_00240 PF09578 Spore cortex protein YabQ (Spore_YabQ) KNH48_00250 PF00575 S1 RNA binding domain KNH48_00265 PF00092 von Willebrand factor type A domain KNH48_00270 PF00069 Protein kinase domain KNH48_00280 PF00156 Phosphoribosyl transferase domain KNH48_00285 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_00285 PF17862 AAA+ lid domain KNH48_00285 PF06480 FtsH Extracellular KNH48_00285 PF01434 Peptidase family M41 KNH48_00290 PF03309 Type III pantothenate kinase KNH48_00295 PF01430 Hsp33 protein KNH48_00300 PF00291 Pyridoxal-phosphate dependent enzyme KNH48_00310 PF02152 Dihydroneopterin aldolase KNH48_00315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KNH48_00320 PF00152 tRNA synthetases class II (D, K and N) KNH48_00320 PF01336 OB-fold nucleic acid binding domain KNH48_00395 PF14175 YaaC-like Protein KNH48_00400 PF00571 CBS domain KNH48_00400 PF00478 IMP dehydrogenase / GMP reductase domain KNH48_00405 PF00768 D-alanyl-D-alanine carboxypeptidase KNH48_00405 PF07943 Penicillin-binding protein 5, C-terminal domain KNH48_00420 PF01680 SOR/SNZ family KNH48_00425 PF01174 SNO glutamine amidotransferase family KNH48_00430 PF02403 Seryl-tRNA synthetase N-terminal domain KNH48_00430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KNH48_00440 PF01712 Deoxynucleoside kinase KNH48_00445 PF01712 Deoxynucleoside kinase KNH48_00455 PF14437 MafB19-like deaminase KNH48_00465 PF12169 DNA polymerase III subunits gamma and tau domain III KNH48_00470 PF02575 YbaB/EbfC DNA-binding family KNH48_00475 PF02132 RecR protein KNH48_00475 PF13662 Toprim domain KNH48_00520 PF02151 UvrB/uvrC motif KNH48_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KNH48_00530 PF10431 C-terminal, D2-small domain, of ClpB protein KNH48_00530 PF02861 Clp amino terminal domain, pathogenicity island component KNH48_00530 PF17871 AAA lid domain KNH48_00530 PF07724 AAA domain (Cdc48 subfamily) KNH48_00530 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_00535 PF18073 Rubredoxin metal binding domain KNH48_00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KNH48_00550 PF02542 YgbB family KNH48_00565 PF09190 DALR domain KNH48_00565 PF01406 tRNA synthetases class I (C) catalytic domain KNH48_00570 PF00636 Ribonuclease III domain KNH48_00575 PF00588 SpoU rRNA Methylase family KNH48_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding KNH48_00580 PF05991 YacP-like NYN domain KNH48_00585 PF04542 Sigma-70 region 2 KNH48_00585 PF08281 Sigma-70, region 4 KNH48_00590 PF00471 Ribosomal protein L33 KNH48_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KNH48_00600 PF02357 Transcription termination factor nusG KNH48_00600 PF00467 KOW motif KNH48_00605 PF00298 Ribosomal protein L11, RNA binding domain KNH48_00605 PF03946 Ribosomal protein L11, N-terminal domain KNH48_00610 PF00687 Ribosomal protein L1p/L10e family KNH48_00615 PF00466 Ribosomal protein L10 KNH48_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain KNH48_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain KNH48_00625 PF05175 Methyltransferase small domain KNH48_00630 PF04563 RNA polymerase beta subunit KNH48_00630 PF04561 RNA polymerase Rpb2, domain 2 KNH48_00630 PF04565 RNA polymerase Rpb2, domain 3 KNH48_00630 PF10385 RNA polymerase beta subunit external 1 domain KNH48_00630 PF00562 RNA polymerase Rpb2, domain 6 KNH48_00630 PF04560 RNA polymerase Rpb2, domain 7 KNH48_00635 PF04998 RNA polymerase Rpb1, domain 5 KNH48_00635 PF04983 RNA polymerase Rpb1, domain 3 KNH48_00635 PF05000 RNA polymerase Rpb1, domain 4 KNH48_00635 PF04997 RNA polymerase Rpb1, domain 1 KNH48_00635 PF00623 RNA polymerase Rpb1, domain 2 KNH48_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KNH48_00645 PF00164 Ribosomal protein S12/S23 KNH48_00650 PF00177 Ribosomal protein S7p/S5e KNH48_00655 PF00679 Elongation factor G C-terminus KNH48_00655 PF14492 Elongation Factor G, domain II KNH48_00655 PF03764 Elongation factor G, domain IV KNH48_00655 PF00009 Elongation factor Tu GTP binding domain KNH48_00655 PF03144 Elongation factor Tu domain 2 KNH48_00660 PF03143 Elongation factor Tu C-terminal domain KNH48_00660 PF00009 Elongation factor Tu GTP binding domain KNH48_00660 PF03144 Elongation factor Tu domain 2 KNH48_00665 PF00338 Ribosomal protein S10p/S20e KNH48_00670 PF00297 Ribosomal protein L3 KNH48_00675 PF00573 Ribosomal protein L4/L1 family KNH48_00680 PF00276 Ribosomal protein L23 KNH48_00685 PF00181 Ribosomal Proteins L2, RNA binding domain KNH48_00685 PF03947 Ribosomal Proteins L2, C-terminal domain KNH48_00690 PF00203 Ribosomal protein S19 KNH48_00695 PF00237 Ribosomal protein L22p/L17e KNH48_00700 PF07650 KH domain KNH48_00700 PF00189 Ribosomal protein S3, C-terminal domain KNH48_00705 PF00252 Ribosomal protein L16p/L10e KNH48_00710 PF00831 Ribosomal L29 protein KNH48_00715 PF00366 Ribosomal protein S17 KNH48_00720 PF00238 Ribosomal protein L14p/L23e KNH48_00725 PF00467 KOW motif KNH48_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KNH48_00730 PF00281 Ribosomal protein L5 KNH48_00730 PF00673 ribosomal L5P family C-terminus KNH48_00735 PF00253 Ribosomal protein S14p/S29e KNH48_00740 PF00410 Ribosomal protein S8 KNH48_00745 PF00347 Ribosomal protein L6 KNH48_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KNH48_00755 PF00333 Ribosomal protein S5, N-terminal domain KNH48_00755 PF03719 Ribosomal protein S5, C-terminal domain KNH48_00760 PF00327 Ribosomal protein L30p/L7e KNH48_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KNH48_00770 PF00344 SecY translocase KNH48_00775 PF05191 Adenylate kinase, active site lid KNH48_00780 PF01176 Translation initiation factor 1A / IF-1 KNH48_00785 PF00444 Ribosomal protein L36 KNH48_00790 PF00416 Ribosomal protein S13/S18 KNH48_00795 PF00411 Ribosomal protein S11 KNH48_00800 PF01000 RNA polymerase Rpb3/RpoA insert domain KNH48_00800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KNH48_00800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KNH48_00805 PF01196 Ribosomal protein L17 KNH48_00810 PF00005 ABC transporter KNH48_00815 PF00005 ABC transporter KNH48_00820 PF02361 Cobalt transport protein KNH48_00825 PF01416 tRNA pseudouridine synthase KNH48_00835 PF00572 Ribosomal protein L13 KNH48_00840 PF00380 Ribosomal protein S9/S16 KNH48_00850 PF01747 ATP-sulfurylase KNH48_00850 PF14306 PUA-like domain KNH48_00860 PF00324 Amino acid permease KNH48_00875 PF10609 NUBPL iron-transfer P-loop NTPase KNH48_00880 PF17898 Spore germination GerD central core domain KNH48_00885 PF14089 KinB-signalling pathway activation in sporulation KNH48_00895 PF12833 Helix-turn-helix domain KNH48_00900 PF01522 Polysaccharide deacetylase KNH48_00910 PF01654 Cytochrome bd terminal oxidase subunit I KNH48_00915 PF02322 Cytochrome bd terminal oxidase subunit II KNH48_00925 PF00664 ABC transporter transmembrane region KNH48_00925 PF00005 ABC transporter KNH48_00990 PF00491 Arginase family KNH48_01000 PF04542 Sigma-70 region 2 KNH48_01000 PF08281 Sigma-70, region 4 KNH48_01005 PF13490 Putative zinc-finger KNH48_01010 PF02457 DisA bacterial checkpoint controller nucleotide-binding KNH48_01015 PF07949 YbbR-like protein KNH48_01020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KNH48_01020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KNH48_01020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KNH48_01020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KNH48_01065 PF03466 LysR substrate binding domain KNH48_01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_01070 PF02146 Sir2 family KNH48_01075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_01090 PF03551 Transcriptional regulator PadR-like family KNH48_01095 PF00672 HAMP domain KNH48_01095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_01095 PF02743 Cache domain KNH48_01105 PF11514 Protein of unknown function (DUF3219) KNH48_01130 PF10997 Alternate to MurJ KNH48_01140 PF00368 Hydroxymethylglutaryl-coenzyme A reductase KNH48_01145 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KNH48_01145 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KNH48_01170 PF00005 ABC transporter KNH48_01170 PF00571 CBS domain KNH48_01175 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_01185 PF00258 Flavodoxin KNH48_01190 PF13545 Crp-like helix-turn-helix domain KNH48_01190 PF00027 Cyclic nucleotide-binding domain KNH48_01195 PF00403 Heavy-metal-associated domain KNH48_01200 PF00403 Heavy-metal-associated domain KNH48_01205 PF00317 Ribonucleotide reductase, all-alpha domain KNH48_01205 PF02867 Ribonucleotide reductase, barrel domain KNH48_01205 PF03477 ATP cone domain KNH48_01215 PF00268 Ribonucleotide reductase, small chain KNH48_01220 PF02660 Glycerol-3-phosphate acyltransferase KNH48_01225 PF00535 Glycosyl transferase family 2 KNH48_01250 PF00892 EamA-like transporter family KNH48_01260 PF00893 Small Multidrug Resistance protein KNH48_01275 PF01032 FecCD transport family KNH48_01280 PF01497 Periplasmic binding protein KNH48_01285 PF00005 ABC transporter KNH48_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_01310 PF01709 Transcriptional regulator KNH48_01315 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KNH48_01315 PF01740 STAS domain KNH48_01335 PF00440 Bacterial regulatory proteins, tetR family KNH48_01350 PF00171 Aldehyde dehydrogenase family KNH48_01355 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KNH48_01355 PF12708 Pectate lyase superfamily protein KNH48_01370 PF01507 Phosphoadenosine phosphosulfate reductase family KNH48_01375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KNH48_01380 PF01903 CbiX KNH48_01385 PF14824 Sirohaem biosynthesis protein central KNH48_01390 PF04073 Aminoacyl-tRNA editing domain KNH48_01395 PF00465 Iron-containing alcohol dehydrogenase KNH48_01400 PF00501 AMP-binding enzyme KNH48_01400 PF13193 AMP-binding enzyme C-terminal domain KNH48_01415 PF00892 EamA-like transporter family KNH48_01430 PF01545 Cation efflux family KNH48_01430 PF16916 Dimerisation domain of Zinc Transporter KNH48_01440 PF01380 SIS domain KNH48_01450 PF10509 Galactokinase galactose-binding signature KNH48_01450 PF08544 GHMP kinases C terminal KNH48_01450 PF00288 GHMP kinases N terminal domain KNH48_01465 PF13460 NAD(P)H-binding KNH48_01470 PF03610 PTS system fructose IIA component KNH48_01470 PF00874 PRD domain KNH48_01470 PF00158 Sigma-54 interaction domain KNH48_01480 PF00155 Aminotransferase class I and II KNH48_01485 PF02627 Carboxymuconolactone decarboxylase family KNH48_01505 PF01380 SIS domain KNH48_01510 PF07875 Coat F domain KNH48_01515 PF00248 Aldo/keto reductase family KNH48_01525 PF00324 Amino acid permease KNH48_01530 PF00854 POT family KNH48_01535 PF00324 Amino acid permease KNH48_01545 PF00005 ABC transporter KNH48_01545 PF08402 TOBE domain KNH48_01550 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_01555 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_01560 PF13416 Bacterial extracellular solute-binding protein KNH48_01570 PF13520 Amino acid permease KNH48_01575 PF02589 LUD domain KNH48_01580 PF11870 Domain of unknown function (DUF3390) KNH48_01580 PF13183 4Fe-4S dicluster domain KNH48_01580 PF02589 LUD domain KNH48_01585 PF02754 Cysteine-rich domain KNH48_01590 PF13520 Amino acid permease KNH48_01595 PF00465 Iron-containing alcohol dehydrogenase KNH48_01600 PF00909 Ammonium Transporter Family KNH48_01610 PF03600 Citrate transporter KNH48_01615 PF00535 Glycosyl transferase family 2 KNH48_01620 PF13538 UvrD-like helicase C-terminal domain KNH48_01635 PF07282 Putative transposase DNA-binding domain KNH48_01635 PF01385 Probable transposase KNH48_01635 PF12323 Helix-turn-helix domain KNH48_01665 PF04309 Glycerol-3-phosphate responsive antiterminator KNH48_01670 PF00230 Major intrinsic protein KNH48_01675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KNH48_01675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KNH48_01680 PF01266 FAD dependent oxidoreductase KNH48_01680 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KNH48_01685 PF00375 Sodium:dicarboxylate symporter family KNH48_01690 PF13545 Crp-like helix-turn-helix domain KNH48_01690 PF00027 Cyclic nucleotide-binding domain KNH48_01700 PF04405 Domain of Unknown function (DUF542) KNH48_01700 PF01814 Hemerythrin HHE cation binding domain KNH48_01705 PF04264 YceI-like domain KNH48_01710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KNH48_01720 PF11871 Domain of unknown function (DUF3391) KNH48_01720 PF01966 HD domain KNH48_01725 PF03129 Anticodon binding domain KNH48_01725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KNH48_01730 PF13520 Amino acid permease KNH48_01735 PF02673 Bacitracin resistance protein BacA KNH48_01740 PF02416 mttA/Hcf106 family KNH48_01745 PF01594 AI-2E family transporter KNH48_01750 PF00005 ABC transporter KNH48_01760 PF00497 Bacterial extracellular solute-binding proteins, family 3 KNH48_01765 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_01770 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_01785 PF01638 HxlR-like helix-turn-helix KNH48_01790 PF09335 SNARE associated Golgi protein KNH48_01795 PF09335 SNARE associated Golgi protein KNH48_01800 PF03816 Cell envelope-related transcriptional attenuator domain KNH48_01820 PF02574 Homocysteine S-methyltransferase KNH48_01820 PF02219 Methylenetetrahydrofolate reductase KNH48_01825 PF02965 Vitamin B12 dependent methionine synthase, activation domain KNH48_01825 PF02607 B12 binding domain KNH48_01825 PF02310 B12 binding domain KNH48_01825 PF00809 Pterin binding enzyme KNH48_01825 PF02574 Homocysteine S-methyltransferase KNH48_01855 PF02706 Chain length determinant protein KNH48_01855 PF13807 G-rich domain on putative tyrosine kinase KNH48_01860 PF13614 AAA domain KNH48_01870 PF00483 Nucleotidyl transferase KNH48_01875 PF02397 Bacterial sugar transferase KNH48_01880 PF00534 Glycosyl transferases group 1 KNH48_01880 PF13439 Glycosyltransferase Family 4 KNH48_01890 PF00534 Glycosyl transferases group 1 KNH48_01890 PF13439 Glycosyltransferase Family 4 KNH48_01900 PF01943 Polysaccharide biosynthesis protein KNH48_01905 PF00534 Glycosyl transferases group 1 KNH48_01905 PF13439 Glycosyltransferase Family 4 KNH48_01915 PF00483 Nucleotidyl transferase KNH48_01915 PF01050 Mannose-6-phosphate isomerase KNH48_01955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KNH48_01955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KNH48_01985 PF08240 Alcohol dehydrogenase GroES-like domain KNH48_01985 PF13823 Alcohol dehydrogenase GroES-associated KNH48_01985 PF00107 Zinc-binding dehydrogenase KNH48_01990 PF02525 Flavodoxin-like fold KNH48_02005 PF05036 Sporulation related domain KNH48_02005 PF08239 Bacterial SH3 domain KNH48_02005 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KNH48_02020 PF03060 Nitronate monooxygenase KNH48_02025 PF04237 YjbR KNH48_02035 PF03772 Competence protein KNH48_02035 PF13567 Domain of unknown function (DUF4131) KNH48_02035 PF00753 Metallo-beta-lactamase superfamily KNH48_02065 PF03816 Cell envelope-related transcriptional attenuator domain KNH48_02075 PF00248 Aldo/keto reductase family KNH48_02085 PF13333 Integrase core domain KNH48_02085 PF13276 HTH-like domain KNH48_02085 PF00665 Integrase core domain KNH48_02095 PF12323 Helix-turn-helix domain KNH48_02095 PF01385 Probable transposase KNH48_02095 PF07282 Putative transposase DNA-binding domain KNH48_02130 PF08279 HTH domain KNH48_02130 PF05043 Mga helix-turn-helix domain KNH48_02130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KNH48_02130 PF00874 PRD domain KNH48_02145 PF08279 HTH domain KNH48_02145 PF05043 Mga helix-turn-helix domain KNH48_02145 PF00874 PRD domain KNH48_02145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KNH48_02155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_02165 PF00083 Sugar (and other) transporter KNH48_02175 PF07690 Major Facilitator Superfamily KNH48_02185 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_02190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KNH48_02195 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_02200 PF00571 CBS domain KNH48_02200 PF00005 ABC transporter KNH48_02205 PF12802 MarR family KNH48_02235 PF00753 Metallo-beta-lactamase superfamily KNH48_02235 PF16123 Hydroxyacylglutathione hydrolase C-terminus KNH48_02240 PF00135 Carboxylesterase family KNH48_02245 PF01078 Magnesium chelatase, subunit ChlI KNH48_02245 PF13335 Magnesium chelatase, subunit ChlI C-terminal KNH48_02260 PF00465 Iron-containing alcohol dehydrogenase KNH48_02265 PF02445 Quinolinate synthetase A protein KNH48_02270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KNH48_02270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KNH48_02275 PF00890 FAD binding domain KNH48_02275 PF02910 Fumarate reductase flavoprotein C-term KNH48_02280 PF00266 Aminotransferase class-V KNH48_02295 PF00005 ABC transporter KNH48_02310 PF01226 Formate/nitrite transporter KNH48_02325 PF07155 ECF-type riboflavin transporter, S component KNH48_02360 PF03009 Glycerophosphoryl diester phosphodiesterase family KNH48_02380 PF12431 Transcriptional regulator KNH48_02380 PF00072 Response regulator receiver domain KNH48_02390 PF03069 Acetamidase/Formamidase family KNH48_02395 PF00324 Amino acid permease KNH48_02405 PF02652 L-lactate permease KNH48_02410 PF00392 Bacterial regulatory proteins, gntR family KNH48_02410 PF07729 FCD domain KNH48_02415 PF00155 Aminotransferase class I and II KNH48_02415 PF00392 Bacterial regulatory proteins, gntR family KNH48_02425 PF03816 Cell envelope-related transcriptional attenuator domain KNH48_02435 PF00180 Isocitrate/isopropylmalate dehydrogenase KNH48_02460 PF10460 Peptidase M30 KNH48_02465 PF10710 Protein of unknown function (DUF2512) KNH48_02475 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KNH48_02480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KNH48_02490 PF02378 Phosphotransferase system, EIIC KNH48_02490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KNH48_02495 PF00232 Glycosyl hydrolase family 1 KNH48_02505 PF00793 DAHP synthetase I family KNH48_02510 PF00571 CBS domain KNH48_02510 PF01380 SIS domain KNH48_02515 PF01053 Cys/Met metabolism PLP-dependent enzyme KNH48_02525 PF03633 Glycosyl hydrolase family 65, C-terminal domain KNH48_02525 PF03632 Glycosyl hydrolase family 65 central catalytic domain KNH48_02525 PF03636 Glycosyl hydrolase family 65, N-terminal domain KNH48_02530 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_02535 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_02540 PF01547 Bacterial extracellular solute-binding protein KNH48_02545 PF12833 Helix-turn-helix domain KNH48_02545 PF17853 GGDEF-like domain KNH48_02550 PF03808 Glycosyl transferase WecB/TagA/CpsF family KNH48_02560 PF08240 Alcohol dehydrogenase GroES-like domain KNH48_02560 PF00107 Zinc-binding dehydrogenase KNH48_02565 PF01545 Cation efflux family KNH48_02565 PF16916 Dimerisation domain of Zinc Transporter KNH48_02570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KNH48_02570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KNH48_02570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KNH48_02570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KNH48_02585 PF00005 ABC transporter KNH48_02585 PF08239 Bacterial SH3 domain KNH48_02595 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KNH48_02600 PF00510 Cytochrome c oxidase subunit III KNH48_02605 PF00115 Cytochrome C and Quinol oxidase polypeptide I KNH48_02610 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KNH48_02615 PF13419 Haloacid dehalogenase-like hydrolase KNH48_02620 PF03816 Cell envelope-related transcriptional attenuator domain KNH48_02630 PF00665 Integrase core domain KNH48_02630 PF13276 HTH-like domain KNH48_02630 PF13333 Integrase core domain KNH48_02635 PF00665 Integrase core domain KNH48_02635 PF13333 Integrase core domain KNH48_02640 PF13419 Haloacid dehalogenase-like hydrolase KNH48_02645 PF03632 Glycosyl hydrolase family 65 central catalytic domain KNH48_02645 PF03636 Glycosyl hydrolase family 65, N-terminal domain KNH48_02645 PF03633 Glycosyl hydrolase family 65, C-terminal domain KNH48_02655 PF00356 Bacterial regulatory proteins, lacI family KNH48_02670 PF00311 Phosphoenolpyruvate carboxylase KNH48_02680 PF00056 lactate/malate dehydrogenase, NAD binding domain KNH48_02680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KNH48_02685 PF01476 LysM domain KNH48_02685 PF06725 3D domain KNH48_02705 PF01061 ABC-2 type transporter KNH48_02710 PF01910 Thiamine-binding protein KNH48_02715 PF10282 Lactonase, 7-bladed beta-propeller KNH48_02725 PF00874 PRD domain KNH48_02725 PF03610 PTS system fructose IIA component KNH48_02725 PF00158 Sigma-54 interaction domain KNH48_02730 PF03610 PTS system fructose IIA component KNH48_02730 PF03830 PTS system sorbose subfamily IIB component KNH48_02735 PF03610 PTS system fructose IIA component KNH48_02735 PF03830 PTS system sorbose subfamily IIB component KNH48_02740 PF03609 PTS system sorbose-specific iic component KNH48_02745 PF03613 PTS system mannose/fructose/sorbose family IID component KNH48_02755 PF00285 Citrate synthase, C-terminal domain KNH48_02760 PF03972 MmgE/PrpD family KNH48_02775 PF01425 Amidase KNH48_02780 PF01910 Thiamine-binding protein KNH48_02785 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_02790 PF09084 NMT1/THI5 like KNH48_02795 PF00005 ABC transporter KNH48_02800 PF08544 GHMP kinases C terminal KNH48_02800 PF00288 GHMP kinases N terminal domain KNH48_02805 PF00291 Pyridoxal-phosphate dependent enzyme KNH48_02810 PF00742 Homoserine dehydrogenase KNH48_02810 PF01842 ACT domain KNH48_02810 PF03447 Homoserine dehydrogenase, NAD binding domain KNH48_02815 PF00491 Arginase family KNH48_02825 PF01256 Carbohydrate kinase KNH48_02830 PF00483 Nucleotidyl transferase KNH48_02840 PF00474 Sodium:solute symporter family KNH48_02855 PF00171 Aldehyde dehydrogenase family KNH48_02855 PF00465 Iron-containing alcohol dehydrogenase KNH48_02860 PF00270 DEAD/DEAH box helicase KNH48_02860 PF00271 Helicase conserved C-terminal domain KNH48_02870 PF01476 LysM domain KNH48_02870 PF00877 NlpC/P60 family KNH48_02875 PF00557 Metallopeptidase family M24 KNH48_02880 PF02632 BioY family KNH48_02885 PF00376 MerR family regulatory protein KNH48_02885 PF09278 MerR, DNA binding KNH48_02890 PF00501 AMP-binding enzyme KNH48_02890 PF13193 AMP-binding enzyme C-terminal domain KNH48_02895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KNH48_02895 PF02770 Acyl-CoA dehydrogenase, middle domain KNH48_02895 PF18158 Adaptive response protein AidB N-terminal domain KNH48_02905 PF02522 Aminoglycoside 3-N-acetyltransferase KNH48_02915 PF00582 Universal stress protein family KNH48_02930 PF04055 Radical SAM superfamily KNH48_02930 PF08756 YfkB-like domain KNH48_02940 PF00356 Bacterial regulatory proteins, lacI family KNH48_02940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KNH48_02945 PF01380 SIS domain KNH48_02960 PF12146 Serine aminopeptidase, S33 KNH48_02980 PF03358 NADPH-dependent FMN reductase KNH48_02990 PF00149 Calcineurin-like phosphoesterase KNH48_02995 PF13514 AAA domain KNH48_03000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KNH48_03000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KNH48_03005 PF01554 MatE KNH48_03025 PF00155 Aminotransferase class I and II KNH48_03030 PF03737 Aldolase/RraA KNH48_03040 PF00550 Phosphopantetheine attachment site KNH48_03080 PF01370 NAD dependent epimerase/dehydratase family KNH48_03080 PF08338 Domain of unknown function (DUF1731) KNH48_03085 PF03070 TENA/THI-4/PQQC family KNH48_03110 PF00202 Aminotransferase class-III KNH48_03130 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KNH48_03145 PF02770 Acyl-CoA dehydrogenase, middle domain KNH48_03145 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KNH48_03145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KNH48_03155 PF10509 Galactokinase galactose-binding signature KNH48_03155 PF08544 GHMP kinases C terminal KNH48_03155 PF00288 GHMP kinases N terminal domain KNH48_03160 PF16363 GDP-mannose 4,6 dehydratase KNH48_03165 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KNH48_03165 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KNH48_03170 PF01263 Aldose 1-epimerase KNH48_03175 PF00356 Bacterial regulatory proteins, lacI family KNH48_03190 PF17783 CvfB-like winged helix domain KNH48_03190 PF13509 S1 domain KNH48_03195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KNH48_03205 PF04204 Homoserine O-succinyltransferase KNH48_03215 PF01979 Amidohydrolase family KNH48_03220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KNH48_03225 PF07702 UTRA domain KNH48_03225 PF00392 Bacterial regulatory proteins, gntR family KNH48_03230 PF01476 LysM domain KNH48_03230 PF00877 NlpC/P60 family KNH48_03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_03235 PF08447 PAS fold KNH48_03235 PF13426 PAS domain KNH48_03240 PF00905 Penicillin binding protein transpeptidase domain KNH48_03240 PF03717 Penicillin-binding Protein dimerisation domain KNH48_03240 PF05223 NTF2-like N-terminal transpeptidase domain KNH48_03250 PF09186 Domain of unknown function (DUF1949) KNH48_03250 PF01205 Uncharacterized protein family UPF0029 KNH48_03255 PF05384 Sensor protein DegS KNH48_03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_03255 PF07730 Histidine kinase KNH48_03260 PF00072 Response regulator receiver domain KNH48_03260 PF00196 Bacterial regulatory proteins, luxR family KNH48_03265 PF13520 Amino acid permease KNH48_03270 PF02645 Uncharacterised protein, DegV family COG1307 KNH48_03280 PF00156 Phosphoribosyl transferase domain KNH48_03290 PF04316 Anti-sigma-28 factor, FlgM KNH48_03300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KNH48_03300 PF00460 Flagella basal body rod protein KNH48_03305 PF00669 Bacterial flagellin N-terminal helical region KNH48_03305 PF00700 Bacterial flagellin C-terminal helical region KNH48_03310 PF02623 FliW protein KNH48_03315 PF02599 Global regulator protein family KNH48_03320 PF07517 SecA DEAD-like domain KNH48_03320 PF01043 SecA preprotein cross-linking domain KNH48_03320 PF02810 SEC-C motif KNH48_03320 PF07516 SecA Wing and Scaffold domain KNH48_03325 PF00700 Bacterial flagellin C-terminal helical region KNH48_03325 PF00669 Bacterial flagellin N-terminal helical region KNH48_03335 PF13654 AAA domain KNH48_03335 PF05362 Lon protease (S16) C-terminal proteolytic domain KNH48_03345 PF02245 Methylpurine-DNA glycosylase (MPG) KNH48_03355 PF03646 FlaG protein KNH48_03365 PF02561 Flagellar protein FliS KNH48_03375 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KNH48_03375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KNH48_03385 PF02810 SEC-C motif KNH48_03385 PF07517 SecA DEAD-like domain KNH48_03385 PF07516 SecA Wing and Scaffold domain KNH48_03385 PF01043 SecA preprotein cross-linking domain KNH48_03395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KNH48_03395 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KNH48_03400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KNH48_03405 PF00005 ABC transporter KNH48_03410 PF02687 FtsX-like permease family KNH48_03410 PF18075 FtsX extracellular domain KNH48_03415 PF04225 Opacity-associated protein A LysM-like domain KNH48_03415 PF01551 Peptidase family M23 KNH48_03420 PF13091 PLD-like domain KNH48_03420 PF13396 Phospholipase_D-nuclease N-terminal KNH48_03425 PF01053 Cys/Met metabolism PLP-dependent enzyme KNH48_03435 PF17820 PDZ domain KNH48_03435 PF03572 Peptidase family S41 KNH48_03435 PF01471 Putative peptidoglycan binding domain KNH48_03445 PF17820 PDZ domain KNH48_03450 PF01032 FecCD transport family KNH48_03455 PF01032 FecCD transport family KNH48_03460 PF00005 ABC transporter KNH48_03470 PF00037 4Fe-4S binding domain KNH48_03480 PF00072 Response regulator receiver domain KNH48_03480 PF00486 Transcriptional regulatory protein, C terminal KNH48_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_03485 PF00512 His Kinase A (phospho-acceptor) domain KNH48_03485 PF00989 PAS fold KNH48_03485 PF16736 Single Cache-like KNH48_03495 PF12849 PBP superfamily domain KNH48_03500 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_03505 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_03515 PF00005 ABC transporter KNH48_03520 PF00005 ABC transporter KNH48_03545 PF04851 Type III restriction enzyme, res subunit KNH48_03545 PF02151 UvrB/uvrC motif KNH48_03545 PF12344 Ultra-violet resistance protein B KNH48_03545 PF00271 Helicase conserved C-terminal domain KNH48_03545 PF17757 UvrB interaction domain KNH48_03550 PF17755 UvrA DNA-binding domain KNH48_03550 PF17760 UvrA interaction domain KNH48_03550 PF00005 ABC transporter KNH48_03555 PF01467 Cytidylyltransferase-like KNH48_03560 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KNH48_03565 PF00535 Glycosyl transferase family 2 KNH48_03575 PF01467 Cytidylyltransferase-like KNH48_03580 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KNH48_03585 PF01061 ABC-2 type transporter KNH48_03590 PF00535 Glycosyl transferase family 2 KNH48_03590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KNH48_03595 PF13349 Putative adhesin KNH48_03605 PF07475 HPr Serine kinase C-terminal domain KNH48_03605 PF02603 HPr Serine kinase N terminus KNH48_03610 PF01790 Prolipoprotein diacylglyceryl transferase KNH48_03615 PF13419 Haloacid dehalogenase-like hydrolase KNH48_03620 PF14602 Hexapeptide repeat of succinyl-transferase KNH48_03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_03635 PF00293 NUDIX domain KNH48_03640 PF03668 P-loop ATPase protein family KNH48_03650 PF02650 WhiA C-terminal HTH domain KNH48_03650 PF14527 WhiA LAGLIDADG-like domain KNH48_03650 PF10298 WhiA N-terminal LAGLIDADG-like domain KNH48_03655 PF00381 PTS HPr component phosphorylation site KNH48_03660 PF00574 Clp protease KNH48_03680 PF10415 Fumarase C C-terminus KNH48_03680 PF00206 Lyase KNH48_03685 PF00269 Small, acid-soluble spore proteins, alpha/beta type KNH48_03690 PF00005 ABC transporter KNH48_03690 PF17912 MalK OB fold domain KNH48_03690 PF03459 TOBE domain KNH48_03695 PF13556 PucR C-terminal helix-turn-helix domain KNH48_03705 PF14398 YheC/D like ATP-grasp KNH48_03710 PF14398 YheC/D like ATP-grasp KNH48_03720 PF04286 Protein of unknown function (DUF445) KNH48_03725 PF06133 Control of competence regulator ComK, YlbF/YmcA KNH48_03735 PF00378 Enoyl-CoA hydratase/isomerase KNH48_03740 PF14120 YhzD-like protein KNH48_03745 PF03741 Integral membrane protein TerC family KNH48_03750 PF03773 Predicted permease KNH48_03755 PF09323 Domain of unknown function (DUF1980) KNH48_03760 PF00149 Calcineurin-like phosphoesterase KNH48_03775 PF14147 Sporulation protein YhaL KNH48_03780 PF05698 Bacterial trigger factor protein (TF) C-terminus KNH48_03790 PF08963 Protein of unknown function (DUF1878) KNH48_03795 PF01047 MarR family KNH48_03810 PF17099 Tryptophan transporter TrpP KNH48_03815 PF01230 HIT domain KNH48_03820 PF00005 ABC transporter KNH48_03825 PF05975 Bacterial ABC transporter protein EcsB KNH48_03830 PF07687 Peptidase dimerisation domain KNH48_03830 PF01546 Peptidase family M20/M25/M40 KNH48_03840 PF03992 Antibiotic biosynthesis monooxygenase KNH48_03850 PF00762 Ferrochelatase KNH48_03855 PF01593 Flavin containing amine oxidoreductase KNH48_03860 PF17932 Tetracyclin repressor-like, C-terminal domain KNH48_03860 PF00440 Bacterial regulatory proteins, tetR family KNH48_03885 PF00892 EamA-like transporter family KNH48_03890 PF00171 Aldehyde dehydrogenase family KNH48_03895 PF02630 SCO1/SenC KNH48_03905 PF14149 YhfH-like protein KNH48_03910 PF03099 Biotin/lipoate A/B protein ligase family KNH48_03910 PF10437 Bacterial lipoate protein ligase C-terminus KNH48_03915 PF13193 AMP-binding enzyme C-terminal domain KNH48_03915 PF00501 AMP-binding enzyme KNH48_03920 PF03591 AzlC protein KNH48_03930 PF16491 CAAX prenyl protease N-terminal, five membrane helices KNH48_03930 PF01435 Peptidase family M48 KNH48_03940 PF06338 ComK protein KNH48_03950 PF12705 PD-(D/E)XK nuclease superfamily KNH48_03955 PF12705 PD-(D/E)XK nuclease superfamily KNH48_03955 PF00580 UvrD/REP helicase N-terminal domain KNH48_03955 PF13361 UvrD-like helicase C-terminal domain KNH48_03960 PF10676 Spore germination protein gerPA/gerPF KNH48_03965 PF10970 Spore germination protein GerPE KNH48_03975 PF10737 Spore germination protein GerPC KNH48_03985 PF10676 Spore germination protein gerPA/gerPF KNH48_03990 PF04235 Protein of unknown function (DUF418) KNH48_04000 PF07457 Protein of unknown function (DUF1516) KNH48_04015 PF02645 Uncharacterised protein, DegV family COG1307 KNH48_04020 PF12758 Protein of unknown function (DUF3813) KNH48_04035 PF01883 Iron-sulfur cluster assembly protein KNH48_04040 PF14168 YjzC-like protein KNH48_04065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KNH48_04065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KNH48_04070 PF00109 Beta-ketoacyl synthase, N-terminal domain KNH48_04070 PF02801 Beta-ketoacyl synthase, C-terminal domain KNH48_04080 PF00005 ABC transporter KNH48_04080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KNH48_04085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KNH48_04085 PF00005 ABC transporter KNH48_04090 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_04095 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_04100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KNH48_04110 PF00579 tRNA synthetases class I (W and Y) KNH48_04120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KNH48_04125 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_04130 PF12911 N-terminal TM domain of oligopeptide transport permease C KNH48_04130 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_04140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KNH48_04140 PF00005 ABC transporter KNH48_04145 PF03960 ArsC family KNH48_04150 PF05389 Negative regulator of genetic competence (MecA) KNH48_04155 PF06054 Competence protein CoiA-like family KNH48_04160 PF01432 Peptidase family M3 KNH48_04160 PF08439 Oligopeptidase F KNH48_04175 PF01152 Bacterial-like globin KNH48_04180 PF01464 Transglycosylase SLT domain KNH48_04185 PF01928 CYTH domain KNH48_04195 PF04607 Region found in RelA / SpoT proteins KNH48_04200 PF01513 ATP-NAD kinase KNH48_04205 PF00849 RNA pseudouridylate synthase KNH48_04210 PF00149 Calcineurin-like phosphoesterase KNH48_04240 PF07098 Protein of unknown function (DUF1360) KNH48_04255 PF07451 Stage V sporulation protein AD (SpoVAD) KNH48_04260 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KNH48_04270 PF14069 Stage VI sporulation protein F KNH48_04280 PF13673 Acetyltransferase (GNAT) domain KNH48_04290 PF00756 Putative esterase KNH48_04315 PF00480 ROK family KNH48_04340 PF03051 Peptidase C1-like family KNH48_04350 PF08439 Oligopeptidase F KNH48_04350 PF01432 Peptidase family M3 KNH48_04355 PF03698 Uncharacterised protein family (UPF0180) KNH48_04365 PF00501 AMP-binding enzyme KNH48_04365 PF13193 AMP-binding enzyme C-terminal domain KNH48_04375 PF02417 Chromate transporter KNH48_04380 PF01037 Lrp/AsnC ligand binding domain KNH48_04380 PF13404 AsnC-type helix-turn-helix domain KNH48_04400 PF12833 Helix-turn-helix domain KNH48_04400 PF10114 Sensory domain found in PocR KNH48_04410 PF01717 Cobalamin-independent synthase, Catalytic domain KNH48_04430 PF07690 Major Facilitator Superfamily KNH48_04445 PF07690 Major Facilitator Superfamily KNH48_04455 PF02082 Transcriptional regulator KNH48_04460 PF00970 Oxidoreductase FAD-binding domain KNH48_04460 PF00042 Globin KNH48_04460 PF00175 Oxidoreductase NAD-binding domain KNH48_04465 PF01925 Sulfite exporter TauE/SafE KNH48_04470 PF00210 Ferritin-like domain KNH48_04480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KNH48_04480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KNH48_04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_04485 PF00512 His Kinase A (phospho-acceptor) domain KNH48_04485 PF00989 PAS fold KNH48_04490 PF00009 Elongation factor Tu GTP binding domain KNH48_04490 PF16658 Class II release factor RF3, C-terminal domain KNH48_04490 PF03144 Elongation factor Tu domain 2 KNH48_04505 PF00269 Small, acid-soluble spore proteins, alpha/beta type KNH48_04520 PF00989 PAS fold KNH48_04520 PF00512 His Kinase A (phospho-acceptor) domain KNH48_04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_04520 PF13188 PAS domain KNH48_04520 PF13426 PAS domain KNH48_04525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KNH48_04525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KNH48_04535 PF09388 Spo0E like sporulation regulatory protein KNH48_04540 PF10431 C-terminal, D2-small domain, of ClpB protein KNH48_04540 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_04540 PF07724 AAA domain (Cdc48 subfamily) KNH48_04540 PF17871 AAA lid domain KNH48_04555 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KNH48_04565 PF00381 PTS HPr component phosphorylation site KNH48_04570 PF05524 PEP-utilising enzyme, N-terminal KNH48_04570 PF00391 PEP-utilising enzyme, mobile domain KNH48_04570 PF02896 PEP-utilising enzyme, TIM barrel domain KNH48_04580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KNH48_04580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KNH48_04585 PF00155 Aminotransferase class I and II KNH48_04590 PF01584 CheW-like domain KNH48_04590 PF00072 Response regulator receiver domain KNH48_04595 PF14177 YkyB-like protein KNH48_04600 PF03176 MMPL family KNH48_04645 PF03069 Acetamidase/Formamidase family KNH48_04650 PF08796 Protein of unknown function (DUF1797) KNH48_04660 PF03466 LysR substrate binding domain KNH48_04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_04665 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KNH48_04665 PF14602 Hexapeptide repeat of succinyl-transferase KNH48_04665 PF00132 Bacterial transferase hexapeptide (six repeats) KNH48_04670 PF01546 Peptidase family M20/M25/M40 KNH48_04670 PF07687 Peptidase dimerisation domain KNH48_04680 PF00753 Metallo-beta-lactamase superfamily KNH48_04680 PF17770 Ribonuclease J C-terminal domain KNH48_04680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KNH48_04685 PF07288 Protein of unknown function (DUF1447) KNH48_04695 PF00676 Dehydrogenase E1 component KNH48_04700 PF02779 Transketolase, pyrimidine binding domain KNH48_04700 PF02780 Transketolase, C-terminal domain KNH48_04705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KNH48_04705 PF00364 Biotin-requiring enzyme KNH48_04705 PF02817 e3 binding domain KNH48_04710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_04710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KNH48_04725 PF01276 Orn/Lys/Arg decarboxylase, major domain KNH48_04725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KNH48_04735 PF05256 Uncharacterised protein family (UPF0223) KNH48_04740 PF06335 Protein of unknown function (DUF1054) KNH48_04750 PF00459 Inositol monophosphatase family KNH48_04760 PF00679 Elongation factor G C-terminus KNH48_04760 PF14492 Elongation Factor G, domain II KNH48_04760 PF00009 Elongation factor Tu GTP binding domain KNH48_04760 PF03144 Elongation factor Tu domain 2 KNH48_04765 PF14036 YlaH-like protein KNH48_04770 PF02562 PhoH-like protein KNH48_04770 PF13638 PIN domain KNH48_04780 PF07408 Protein of unknown function (DUF1507) KNH48_04785 PF01098 Cell cycle protein KNH48_04790 PF02628 Cytochrome oxidase assembly protein KNH48_04795 PF01040 UbiA prenyltransferase family KNH48_04800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KNH48_04800 PF00034 Cytochrome c KNH48_04800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KNH48_04805 PF00115 Cytochrome C and Quinol oxidase polypeptide I KNH48_04810 PF00510 Cytochrome c oxidase subunit III KNH48_04815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KNH48_04820 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KNH48_04825 PF08868 YugN-like family KNH48_04830 PF00188 Cysteine-rich secretory protein family KNH48_04830 PF14504 CAP-associated N-terminal KNH48_04845 PF14003 YlbE-like protein KNH48_04855 PF06133 Control of competence regulator ComK, YlbF/YmcA KNH48_04860 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KNH48_04875 PF01467 Cytidylyltransferase-like KNH48_04880 PF07670 Nucleoside recognition KNH48_04885 PF01734 Patatin-like phospholipase KNH48_04890 PF05362 Lon protease (S16) C-terminal proteolytic domain KNH48_04890 PF13180 PDZ domain KNH48_04895 PF05636 HIGH Nucleotidyl Transferase KNH48_04900 PF02620 Large ribosomal RNA subunit accumulation protein YceD KNH48_04905 PF01783 Ribosomal L32p protein family KNH48_04915 PF13508 Acetyltransferase (GNAT) domain KNH48_04920 PF02558 Ketopantoate reductase PanE/ApbA KNH48_04920 PF08546 Ketopantoate reductase PanE/ApbA C terminal KNH48_04930 PF02381 MraZ protein, putative antitoxin-like KNH48_04935 PF01795 MraW methylase family KNH48_04940 PF04977 Septum formation initiator KNH48_04955 PF01225 Mur ligase family, catalytic domain KNH48_04955 PF02875 Mur ligase family, glutamate ligase domain KNH48_04955 PF08245 Mur ligase middle domain KNH48_04965 PF00953 Glycosyl transferase family 4 KNH48_04965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KNH48_04970 PF08245 Mur ligase middle domain KNH48_04970 PF02875 Mur ligase family, glutamate ligase domain KNH48_04980 PF03033 Glycosyltransferase family 28 N-terminal domain KNH48_04980 PF04101 Glycosyltransferase family 28 C-terminal domain KNH48_04985 PF08478 POTRA domain, FtsQ-type KNH48_04990 PF02491 SHS2 domain inserted in FTSA KNH48_04995 PF00091 Tubulin/FtsZ family, GTPase domain KNH48_04995 PF12327 FtsZ family, C-terminal domain KNH48_05005 PF04542 Sigma-70 region 2 KNH48_05005 PF04545 Sigma-70, region 4 KNH48_05010 PF04542 Sigma-70 region 2 KNH48_05010 PF04539 Sigma-70 region 3 KNH48_05010 PF04545 Sigma-70, region 4 KNH48_05015 PF05239 PRC-barrel domain KNH48_05025 PF02578 Multi-copper polyphenol oxidoreductase laccase KNH48_05030 PF01168 Alanine racemase, N-terminal domain KNH48_05035 PF04472 Cell division protein SepF KNH48_05040 PF02325 YGGT family KNH48_05045 PF01479 S4 domain KNH48_05045 PF17774 Putative RNA-binding domain in YlmH KNH48_05050 PF05103 DivIVA protein KNH48_05055 PF08264 Anticodon-binding domain of tRNA KNH48_05055 PF00133 tRNA synthetases class I (I, L, M and V) KNH48_05055 PF06827 Zinc finger found in FPG and IleRS KNH48_05070 PF00849 RNA pseudouridylate synthase KNH48_05070 PF01479 S4 domain KNH48_05075 PF00156 Phosphoribosyl transferase domain KNH48_05080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KNH48_05080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KNH48_05085 PF01979 Amidohydrolase family KNH48_05090 PF00117 Glutamine amidotransferase class-I KNH48_05090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KNH48_05095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KNH48_05095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KNH48_05095 PF02142 MGS-like domain KNH48_05100 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KNH48_05100 PF00970 Oxidoreductase FAD-binding domain KNH48_05105 PF01180 Dihydroorotate dehydrogenase KNH48_05110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KNH48_05115 PF00156 Phosphoribosyl transferase domain KNH48_05140 PF02142 MGS-like domain KNH48_05160 PF01812 5-formyltetrahydrofolate cyclo-ligase family KNH48_05165 PF07690 Major Facilitator Superfamily KNH48_05170 PF07690 Major Facilitator Superfamily KNH48_05175 PF01594 AI-2E family transporter KNH48_05190 PF01242 6-pyruvoyl tetrahydropterin synthase KNH48_05195 PF04055 Radical SAM superfamily KNH48_05205 PF05670 NFACT protein RNA binding domain KNH48_05210 PF00689 Cation transporting ATPase, C-terminus KNH48_05210 PF00690 Cation transporter/ATPase, N-terminus KNH48_05215 PF03755 YicC-like family, N-terminal region KNH48_05215 PF08340 Domain of unknown function (DUF1732) KNH48_05220 PF04025 Domain of unknown function (DUF370) KNH48_05225 PF00625 Guanylate kinase KNH48_05230 PF01192 RNA polymerase Rpb6 KNH48_05235 PF04127 DNA / pantothenate metabolism flavoprotein KNH48_05235 PF02441 Flavoprotein KNH48_05240 PF00271 Helicase conserved C-terminal domain KNH48_05240 PF17764 3′ DNA-binding domain (3′BD) KNH48_05240 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KNH48_05240 PF18074 Primosomal protein N C-terminal domain KNH48_05240 PF04851 Type III restriction enzyme, res subunit KNH48_05245 PF01327 Polypeptide deformylase KNH48_05250 PF02911 Formyl transferase, C-terminal domain KNH48_05250 PF00551 Formyl transferase KNH48_05255 PF01189 16S rRNA methyltransferase RsmB/F KNH48_05255 PF01029 NusB family KNH48_05270 PF03193 RsgA GTPase KNH48_05270 PF16745 RsgA N-terminal domain KNH48_05275 PF00834 Ribulose-phosphate 3 epimerase family KNH48_05280 PF04263 Thiamin pyrophosphokinase, catalytic domain KNH48_05280 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KNH48_05285 PF08183 Stage V sporulation protein family KNH48_05290 PF00830 Ribosomal L28 family KNH48_05295 PF03780 Asp23 family, cell envelope-related function KNH48_05300 PF13684 Dihydroxyacetone kinase family KNH48_05300 PF02734 DAK2 domain KNH48_05305 PF01842 ACT domain KNH48_05305 PF03315 Serine dehydratase beta chain KNH48_05310 PF03313 Serine dehydratase alpha chain KNH48_05315 PF00270 DEAD/DEAH box helicase KNH48_05315 PF00271 Helicase conserved C-terminal domain KNH48_05315 PF17191 RecG wedge domain KNH48_05320 PF01575 MaoC like domain KNH48_05320 PF08279 HTH domain KNH48_05325 PF02504 Fatty acid synthesis protein KNH48_05340 PF00550 Phosphopantetheine attachment site KNH48_05345 PF14622 Ribonuclease-III-like KNH48_05345 PF00035 Double-stranded RNA binding motif KNH48_05350 PF02463 RecF/RecN/SMC N terminal domain KNH48_05350 PF06470 SMC proteins Flexible Hinge Domain KNH48_05355 PF00448 SRP54-type protein, GTPase domain KNH48_05355 PF02881 SRP54-type protein, helical bundle domain KNH48_05360 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KNH48_05365 PF00448 SRP54-type protein, GTPase domain KNH48_05365 PF02881 SRP54-type protein, helical bundle domain KNH48_05365 PF02978 Signal peptide binding domain KNH48_05370 PF00886 Ribosomal protein S16 KNH48_05380 PF11068 YlqD protein KNH48_05385 PF05239 PRC-barrel domain KNH48_05385 PF01782 RimM N-terminal domain KNH48_05390 PF01746 tRNA (Guanine-1)-methyltransferase KNH48_05395 PF01245 Ribosomal protein L19 KNH48_05400 PF10502 Signal peptidase, peptidase S26 KNH48_05405 PF01926 50S ribosome-binding GTPase KNH48_05410 PF01351 Ribonuclease HII KNH48_05420 PF01312 FlhB HrpN YscU SpaS Family KNH48_05425 PF08442 ATP-grasp domain KNH48_05425 PF00549 CoA-ligase KNH48_05430 PF02629 CoA binding domain KNH48_05430 PF00549 CoA-ligase KNH48_05440 PF01131 DNA topoisomerase KNH48_05440 PF01751 Toprim domain KNH48_05440 PF01396 Topoisomerase DNA binding C4 zinc finger KNH48_05445 PF02899 Phage integrase, N-terminal SAM-like domain KNH48_05445 PF00589 Phage integrase family KNH48_05450 PF00227 Proteasome subunit KNH48_05455 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_05455 PF07724 AAA domain (Cdc48 subfamily) KNH48_05455 PF10431 C-terminal, D2-small domain, of ClpB protein KNH48_05460 PF06018 CodY GAF-like domain KNH48_05460 PF08222 CodY helix-turn-helix domain KNH48_05465 PF00460 Flagella basal body rod protein KNH48_05470 PF00460 Flagella basal body rod protein KNH48_05470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KNH48_05475 PF02049 Flagellar hook-basal body complex protein FliE KNH48_05480 PF08345 Flagellar M-ring protein C-terminal KNH48_05480 PF01514 Secretory protein of YscJ/FliF family KNH48_05485 PF01706 FliG C-terminal domain KNH48_05485 PF14841 FliG middle domain KNH48_05485 PF14842 FliG N-terminal domain KNH48_05490 PF02108 Flagellar assembly protein FliH KNH48_05495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KNH48_05495 PF02874 ATP synthase alpha/beta family, beta-barrel domain KNH48_05495 PF18269 T3SS EscN ATPase C-terminal domain KNH48_05500 PF02050 Flagellar FliJ protein KNH48_05515 PF03963 Flagellar hook capping protein - N-terminal region KNH48_05525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KNH48_05525 PF00460 Flagella basal body rod protein KNH48_05535 PF03748 Flagellar basal body-associated protein FliL KNH48_05540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KNH48_05540 PF02154 Flagellar motor switch protein FliM KNH48_05545 PF04509 CheC-like family KNH48_05545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KNH48_05550 PF00072 Response regulator receiver domain KNH48_05555 PF04347 Flagellar biosynthesis protein, FliO KNH48_05560 PF00813 FliP family KNH48_05565 PF01313 Bacterial export proteins, family 3 KNH48_05570 PF01311 Bacterial export proteins, family 1 KNH48_05575 PF01312 FlhB HrpN YscU SpaS Family KNH48_05580 PF00771 FHIPEP family KNH48_05585 PF00448 SRP54-type protein, GTPase domain KNH48_05590 PF10609 NUBPL iron-transfer P-loop NTPase KNH48_05595 PF01339 CheB methylesterase KNH48_05595 PF00072 Response regulator receiver domain KNH48_05600 PF01584 CheW-like domain KNH48_05600 PF02895 Signal transducing histidine kinase, homodimeric domain KNH48_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_05600 PF01627 Hpt domain KNH48_05600 PF07194 P2 response regulator binding domain KNH48_05605 PF01584 CheW-like domain KNH48_05610 PF04509 CheC-like family KNH48_05615 PF03975 CheD chemotactic sensory transduction KNH48_05620 PF04542 Sigma-70 region 2 KNH48_05620 PF04539 Sigma-70 region 3 KNH48_05620 PF04545 Sigma-70, region 4 KNH48_05630 PF00318 Ribosomal protein S2 KNH48_05635 PF00889 Elongation factor TS KNH48_05640 PF00696 Amino acid kinase family KNH48_05645 PF01765 Ribosome recycling factor KNH48_05650 PF01255 Putative undecaprenyl diphosphate synthase KNH48_05660 PF13288 DXP reductoisomerase C-terminal domain KNH48_05660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KNH48_05660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KNH48_05665 PF02163 Peptidase family M50 KNH48_05665 PF13180 PDZ domain KNH48_05670 PF04073 Aminoacyl-tRNA editing domain KNH48_05670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KNH48_05670 PF03129 Anticodon binding domain KNH48_05675 PF11490 DNA polymerase III polC-type N-terminus II KNH48_05675 PF00929 Exonuclease KNH48_05675 PF14480 DNA polymerase III polC-type N-terminus I KNH48_05675 PF14579 Helix-hairpin-helix motif KNH48_05675 PF02811 PHP domain KNH48_05675 PF07733 Bacterial DNA polymerase III alpha NTPase domain KNH48_05675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KNH48_05680 PF02576 RimP N-terminal domain KNH48_05680 PF17384 RimP C-terminal SH3 domain KNH48_05685 PF13184 NusA-like KH domain KNH48_05685 PF08529 NusA N-terminal domain KNH48_05685 PF00575 S1 RNA binding domain KNH48_05690 PF04296 Protein of unknown function (DUF448) KNH48_05695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KNH48_05700 PF00009 Elongation factor Tu GTP binding domain KNH48_05700 PF11987 Translation-initiation factor 2 KNH48_05700 PF04760 Translation initiation factor IF-2, N-terminal region KNH48_05705 PF04456 Protein of unknown function (DUF503) KNH48_05710 PF02033 Ribosome-binding factor A KNH48_05715 PF01509 TruB family pseudouridylate synthase (N terminal domain) KNH48_05715 PF16198 tRNA pseudouridylate synthase B C-terminal domain KNH48_05720 PF01687 Riboflavin kinase KNH48_05720 PF06574 FAD synthetase KNH48_05725 PF00312 Ribosomal protein S15 KNH48_05730 PF00575 S1 RNA binding domain KNH48_05730 PF03725 3' exoribonuclease family, domain 2 KNH48_05730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KNH48_05730 PF00013 KH domain KNH48_05730 PF01138 3' exoribonuclease family, domain 1 KNH48_05740 PF00675 Insulinase (Peptidase family M16) KNH48_05740 PF05193 Peptidase M16 inactive domain KNH48_05745 PF05239 PRC-barrel domain KNH48_05750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KNH48_05750 PF16924 Dipicolinate synthase subunit A N-terminal domain KNH48_05755 PF02441 Flavoprotein KNH48_05760 PF01118 Semialdehyde dehydrogenase, NAD binding domain KNH48_05760 PF02774 Semialdehyde dehydrogenase, dimerisation domain KNH48_05765 PF13840 ACT domain KNH48_05765 PF00696 Amino acid kinase family KNH48_05770 PF00701 Dihydrodipicolinate synthetase family KNH48_05775 PF00753 Metallo-beta-lactamase superfamily KNH48_05775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KNH48_05775 PF17770 Ribonuclease J C-terminal domain KNH48_05780 PF00574 Clp protease KNH48_05785 PF14035 YlzJ-like protein KNH48_05790 PF17854 FtsK alpha domain KNH48_05790 PF09397 Ftsk gamma domain KNH48_05790 PF01580 FtsK/SpoIIIE family KNH48_05795 PF02608 ABC transporter substrate-binding protein PnrA-like KNH48_05800 PF00005 ABC transporter KNH48_05805 PF02653 Branched-chain amino acid transport system / permease component KNH48_05810 PF02653 Branched-chain amino acid transport system / permease component KNH48_05815 PF05193 Peptidase M16 inactive domain KNH48_05820 PF05193 Peptidase M16 inactive domain KNH48_05820 PF00675 Insulinase (Peptidase family M16) KNH48_05830 PF11588 Protein of unknown function (DUF3243) KNH48_05835 PF11868 Protein of unknown function (DUF3388) KNH48_05840 PF13464 Domain of unknown function (DUF4115) KNH48_05845 PF01066 CDP-alcohol phosphatidyltransferase KNH48_05850 PF18146 Damage-inducible protein CinA KH domain KNH48_05850 PF02464 Competence-damaged protein KNH48_05850 PF00994 Probable molybdopterin binding domain KNH48_05855 PF00154 recA bacterial DNA recombination protein KNH48_05860 PF01966 HD domain KNH48_05860 PF00013 KH domain KNH48_05860 PF12072 Domain of unknown function (DUF3552) KNH48_05865 PF13277 YmdB-like protein KNH48_05870 PF04232 Stage V sporulation protein S (SpoVS) KNH48_05875 PF01136 Peptidase family U32 KNH48_05880 PF01136 Peptidase family U32 KNH48_05880 PF16325 Peptidase family U32 C-terminal domain KNH48_05890 PF00919 Uncharacterized protein family UPF0004 KNH48_05890 PF01938 TRAM domain KNH48_05890 PF04055 Radical SAM superfamily KNH48_05895 PF06133 Control of competence regulator ComK, YlbF/YmcA KNH48_05900 PF10628 Outer spore coat protein E (CotE) KNH48_05910 PF01119 DNA mismatch repair protein, C-terminal domain KNH48_05910 PF08676 MutL C terminal dimerisation domain KNH48_05930 PF17209 Hfq protein KNH48_05935 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_05935 PF17866 AAA lid domain KNH48_05940 PF13167 GTP-binding GTPase N-terminal KNH48_05940 PF16360 GTP-binding GTPase Middle Region KNH48_05940 PF01926 50S ribosome-binding GTPase KNH48_05945 PF06838 Methionine gamma-lyase KNH48_05950 PF01367 5'-3' exonuclease, C-terminal SAM fold KNH48_05950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KNH48_05970 PF00313 'Cold-shock' DNA-binding domain KNH48_05975 PF02742 Iron dependent repressor, metal binding and dimerisation domain KNH48_05975 PF01325 Iron dependent repressor, N-terminal DNA binding domain KNH48_05990 PF00005 ABC transporter KNH48_05990 PF16326 ABC transporter C-terminal domain KNH48_05990 PF12848 ABC transporter KNH48_05995 PF08712 Scaffold protein Nfu/NifU N terminal KNH48_05995 PF13769 Virulence factor KNH48_06000 PF06491 Disulphide isomerase KNH48_06010 PF00303 Thymidylate synthase KNH48_06015 PF00186 Dihydrofolate reductase KNH48_06020 PF03006 Haemolysin-III related KNH48_06025 PF13472 GDSL-like Lipase/Acylhydrolase family KNH48_06035 PF01189 16S rRNA methyltransferase RsmB/F KNH48_06035 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KNH48_06035 PF17126 RsmF rRNA methyltransferase first C-terminal domain KNH48_06040 PF01625 Peptide methionine sulfoxide reductase KNH48_06045 PF01641 SelR domain KNH48_06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_06055 PF00672 HAMP domain KNH48_06055 PF02743 Cache domain KNH48_06060 PF06855 YozE SAM-like fold KNH48_06070 PF14162 YozD-like protein KNH48_06080 PF02557 D-alanyl-D-alanine carboxypeptidase KNH48_06085 PF17820 PDZ domain KNH48_06085 PF03572 Peptidase family S41 KNH48_06085 PF01471 Putative peptidoglycan binding domain KNH48_06090 PF01047 MarR family KNH48_06095 PF00188 Cysteine-rich secretory protein family KNH48_06100 PF01554 MatE KNH48_06110 PF01678 Diaminopimelate epimerase KNH48_06115 PF01068 ATP dependent DNA ligase domain KNH48_06120 PF02735 Ku70/Ku80 beta-barrel domain KNH48_06125 PF01569 PAP2 superfamily KNH48_06130 PF00884 Sulfatase KNH48_06135 PF03190 Protein of unknown function, DUF255 KNH48_06140 PF07690 Major Facilitator Superfamily KNH48_06145 PF00072 Response regulator receiver domain KNH48_06145 PF00486 Transcriptional regulatory protein, C terminal KNH48_06160 PF16870 2-oxoglutarate dehydrogenase C-terminal KNH48_06160 PF00676 Dehydrogenase E1 component KNH48_06160 PF02779 Transketolase, pyrimidine binding domain KNH48_06160 PF16078 2-oxoglutarate dehydrogenase N-terminus KNH48_06170 PF00171 Aldehyde dehydrogenase family KNH48_06180 PF02096 60Kd inner membrane protein KNH48_06195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KNH48_06195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KNH48_06200 PF01131 DNA topoisomerase KNH48_06200 PF01751 Toprim domain KNH48_06210 PF02586 SOS response associated peptidase (SRAP) KNH48_06215 PF09515 Thiamine transporter protein (Thia_YuaJ) KNH48_06220 PF00753 Metallo-beta-lactamase superfamily KNH48_06225 PF00571 CBS domain KNH48_06225 PF00478 IMP dehydrogenase / GMP reductase domain KNH48_06230 PF00355 Rieske [2Fe-2S] domain KNH48_06230 PF01266 FAD dependent oxidoreductase KNH48_06235 PF06725 3D domain KNH48_06235 PF01476 LysM domain KNH48_06240 PF01131 DNA topoisomerase KNH48_06240 PF01751 Toprim domain KNH48_06240 PF13342 C-terminal repeat of topoisomerase KNH48_06240 PF01396 Topoisomerase DNA binding C4 zinc finger KNH48_06245 PF00324 Amino acid permease KNH48_06250 PF01544 CorA-like Mg2+ transporter protein KNH48_06260 PF13393 Histidyl-tRNA synthetase KNH48_06265 PF01634 ATP phosphoribosyltransferase KNH48_06270 PF00815 Histidinol dehydrogenase KNH48_06275 PF00475 Imidazoleglycerol-phosphate dehydratase KNH48_06280 PF00117 Glutamine amidotransferase class-I KNH48_06285 PF00977 Histidine biosynthesis protein KNH48_06290 PF00977 Histidine biosynthesis protein KNH48_06310 PF00892 EamA-like transporter family KNH48_06315 PF02386 Cation transport protein KNH48_06320 PF02254 TrkA-N domain KNH48_06320 PF02080 TrkA-C domain KNH48_06325 PF08876 Domain of unknown function (DUF1836) KNH48_06350 PF07690 Major Facilitator Superfamily KNH48_06355 PF03109 ABC1 family KNH48_06365 PF01625 Peptide methionine sulfoxide reductase KNH48_06375 PF00313 'Cold-shock' DNA-binding domain KNH48_06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_06385 PF13192 Thioredoxin domain KNH48_06400 PF02687 FtsX-like permease family KNH48_06405 PF00005 ABC transporter KNH48_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_06415 PF00072 Response regulator receiver domain KNH48_06415 PF00486 Transcriptional regulatory protein, C terminal KNH48_06445 PF07690 Major Facilitator Superfamily KNH48_06450 PF04230 Polysaccharide pyruvyl transferase KNH48_06465 PF13039 Protein of unknown function (DUF3900) KNH48_06465 PF13037 Domain of unknown function (DUF3898) KNH48_06475 PF07690 Major Facilitator Superfamily KNH48_06485 PF00664 ABC transporter transmembrane region KNH48_06485 PF00005 ABC transporter KNH48_06490 PF00664 ABC transporter transmembrane region KNH48_06490 PF00005 ABC transporter KNH48_06500 PF03788 LrgA family KNH48_06505 PF04172 LrgB-like family KNH48_06510 PF13193 AMP-binding enzyme C-terminal domain KNH48_06510 PF00501 AMP-binding enzyme KNH48_06525 PF08179 Small acid-soluble spore protein P family KNH48_06535 PF02073 Thermophilic metalloprotease (M29) KNH48_06545 PF00330 Aconitase family (aconitate hydratase) KNH48_06545 PF00694 Aconitase C-terminal domain KNH48_06555 PF08177 Small acid-soluble spore protein N family KNH48_06575 PF01521 Iron-sulphur cluster biosynthesis KNH48_06580 PF02660 Glycerol-3-phosphate acyltransferase KNH48_06585 PF13380 CoA binding domain KNH48_06590 PF01751 Toprim domain KNH48_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_06590 PF00986 DNA gyrase B subunit, carboxyl terminus KNH48_06590 PF00204 DNA gyrase B KNH48_06595 PF03989 DNA gyrase C-terminal domain, beta-propeller KNH48_06595 PF00521 DNA gyrase/topoisomerase IV, subunit A KNH48_06610 PF03618 Kinase/pyrophosphorylase KNH48_06640 PF03060 Nitronate monooxygenase KNH48_06645 PF10502 Signal peptidase, peptidase S26 KNH48_06675 PF00583 Acetyltransferase (GNAT) family KNH48_06695 PF02110 Hydroxyethylthiazole kinase family KNH48_06700 PF08543 Phosphomethylpyrimidine kinase KNH48_06705 PF02581 Thiamine monophosphate synthase KNH48_06715 PF03473 MOSC domain KNH48_06715 PF03475 3-alpha domain KNH48_06745 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_06750 PF09084 NMT1/THI5 like KNH48_06765 PF04029 2-phosphosulpholactate phosphatase KNH48_06770 PF00258 Flavodoxin KNH48_06770 PF00667 FAD binding domain KNH48_06770 PF00175 Oxidoreductase NAD-binding domain KNH48_06775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KNH48_06775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KNH48_06790 PF01546 Peptidase family M20/M25/M40 KNH48_06790 PF07687 Peptidase dimerisation domain KNH48_06795 PF13536 Putative multidrug resistance efflux transporter KNH48_06800 PF00676 Dehydrogenase E1 component KNH48_06805 PF02779 Transketolase, pyrimidine binding domain KNH48_06805 PF02780 Transketolase, C-terminal domain KNH48_06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_06815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KNH48_06820 PF00158 Sigma-54 interaction domain KNH48_06820 PF01590 GAF domain KNH48_06820 PF02954 Bacterial regulatory protein, Fis family KNH48_06825 PF12794 Mechanosensitive ion channel inner membrane domain 1 KNH48_06825 PF12795 Mechanosensitive ion channel porin domain KNH48_06825 PF00924 Mechanosensitive ion channel KNH48_06840 PF01661 Macro domain KNH48_06845 PF08141 Small acid-soluble spore protein H family KNH48_06850 PF00106 short chain dehydrogenase KNH48_06860 PF02334 Replication terminator protein KNH48_06870 PF04238 Protein of unknown function (DUF420) KNH48_06885 PF00056 lactate/malate dehydrogenase, NAD binding domain KNH48_06885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KNH48_06900 PF01545 Cation efflux family KNH48_06900 PF16916 Dimerisation domain of Zinc Transporter KNH48_06905 PF01022 Bacterial regulatory protein, arsR family KNH48_06910 PF00403 Heavy-metal-associated domain KNH48_06920 PF00589 Phage integrase family KNH48_06920 PF02899 Phage integrase, N-terminal SAM-like domain KNH48_06935 PF07486 Cell Wall Hydrolase KNH48_06940 PF03372 Endonuclease/Exonuclease/phosphatase family KNH48_06950 PF08323 Starch synthase catalytic domain KNH48_06950 PF00534 Glycosyl transferases group 1 KNH48_06960 PF00132 Bacterial transferase hexapeptide (six repeats) KNH48_06960 PF00483 Nucleotidyl transferase KNH48_06965 PF00128 Alpha amylase, catalytic domain KNH48_06965 PF02806 Alpha amylase, C-terminal all-beta domain KNH48_06965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KNH48_06975 PF14139 YpzG-like protein KNH48_06985 PF00583 Acetyltransferase (GNAT) family KNH48_06990 PF00293 NUDIX domain KNH48_06995 PF01566 Natural resistance-associated macrophage protein KNH48_07000 PF00210 Ferritin-like domain KNH48_07010 PF12679 ABC-2 family transporter protein KNH48_07015 PF00005 ABC transporter KNH48_07025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KNH48_07025 PF01565 FAD binding domain KNH48_07040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KNH48_07040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KNH48_07050 PF13452 N-terminal half of MaoC dehydratase KNH48_07070 PF00581 Rhodanese-like domain KNH48_07075 PF00586 AIR synthase related protein, N-terminal domain KNH48_07075 PF02769 AIR synthase related protein, C-terminal domain KNH48_07090 PF03773 Predicted permease KNH48_07095 PF00171 Aldehyde dehydrogenase family KNH48_07100 PF01472 PUA domain KNH48_07100 PF00696 Amino acid kinase family KNH48_07105 PF07849 Protein of unknown function (DUF1641) KNH48_07110 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_07120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KNH48_07125 PF13529 Peptidase_C39 like family KNH48_07130 PF13411 MerR HTH family regulatory protein KNH48_07135 PF01327 Polypeptide deformylase KNH48_07145 PF07670 Nucleoside recognition KNH48_07145 PF17910 FeoB cytosolic helical domain KNH48_07145 PF02421 Ferrous iron transport protein B KNH48_07145 PF07664 Ferrous iron transport protein B C terminus KNH48_07155 PF00155 Aminotransferase class I and II KNH48_07160 PF14698 Argininosuccinate lyase C-terminal KNH48_07160 PF00206 Lyase KNH48_07165 PF00764 Arginosuccinate synthase KNH48_07170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KNH48_07170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KNH48_07180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KNH48_07180 PF00117 Glutamine amidotransferase class-I KNH48_07190 PF00696 Amino acid kinase family KNH48_07195 PF01960 ArgJ family KNH48_07200 PF01118 Semialdehyde dehydrogenase, NAD binding domain KNH48_07200 PF02774 Semialdehyde dehydrogenase, dimerisation domain KNH48_07220 PF07282 Putative transposase DNA-binding domain KNH48_07220 PF01385 Probable transposase KNH48_07220 PF12323 Helix-turn-helix domain KNH48_07235 PF00313 'Cold-shock' DNA-binding domain KNH48_07245 PF17676 LD-carboxypeptidase C-terminal domain KNH48_07245 PF02016 LD-carboxypeptidase N-terminal domain KNH48_07255 PF01553 Acyltransferase KNH48_07260 PF11084 Protein of unknown function (DUF2621) KNH48_07265 PF07301 Protein of unknown function (DUF1453) KNH48_07270 PF00072 Response regulator receiver domain KNH48_07275 PF02683 Cytochrome C biogenesis protein transmembrane region KNH48_07280 PF03672 Uncharacterised protein family (UPF0154) KNH48_07285 PF10747 Sporulation inhibitor of replication protein SirA KNH48_07295 PF05979 Bacterial protein of unknown function (DUF896) KNH48_07300 PF00239 Resolvase, N terminal domain KNH48_07305 PF01476 LysM domain KNH48_07315 PF00120 Glutamine synthetase, catalytic domain KNH48_07315 PF03951 Glutamine synthetase, beta-Grasp domain KNH48_07320 PF13411 MerR HTH family regulatory protein KNH48_07325 PF00350 Dynamin family KNH48_07340 PF00860 Permease family KNH48_07345 PF00156 Phosphoribosyl transferase domain KNH48_07350 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KNH48_07355 PF02926 THUMP domain KNH48_07355 PF01170 Putative RNA methylase family UPF0020 KNH48_07365 PF05103 DivIVA protein KNH48_07370 PF06908 YspA SLOG family KNH48_07390 PF00011 Hsp20/alpha crystallin family KNH48_07415 PF03838 Recombination protein U KNH48_07420 PF00912 Transglycosylase KNH48_07420 PF00905 Penicillin binding protein transpeptidase domain KNH48_07425 PF00730 HhH-GPD superfamily base excision DNA repair protein KNH48_07425 PF10576 Iron-sulfur binding domain of endonuclease III KNH48_07425 PF00633 Helix-hairpin-helix motif KNH48_07430 PF07261 Replication initiation and membrane attachment KNH48_07435 PF00152 tRNA synthetases class II (D, K and N) KNH48_07435 PF01336 OB-fold nucleic acid binding domain KNH48_07440 PF00155 Aminotransferase class I and II KNH48_07450 PF13307 Helicase C-terminal domain KNH48_07450 PF04851 Type III restriction enzyme, res subunit KNH48_07450 PF00929 Exonuclease KNH48_07455 PF02261 Aspartate decarboxylase KNH48_07460 PF02569 Pantoate-beta-alanine ligase KNH48_07465 PF02548 Ketopantoate hydroxymethyltransferase KNH48_07470 PF08279 HTH domain KNH48_07470 PF02237 Biotin protein ligase C terminal domain KNH48_07470 PF03099 Biotin/lipoate A/B protein ligase family KNH48_07475 PF13735 tRNA nucleotidyltransferase domain 2 putative KNH48_07475 PF12627 Probable RNA and SrmB- binding site of polymerase A KNH48_07475 PF01743 Poly A polymerase head domain KNH48_07480 PF13439 Glycosyltransferase Family 4 KNH48_07480 PF00534 Glycosyl transferases group 1 KNH48_07485 PF02585 GlcNAc-PI de-N-acetylase KNH48_07495 PF03819 MazG nucleotide pyrophosphohydrolase domain KNH48_07510 PF04298 Putative neutral zinc metallopeptidase KNH48_07515 PF09577 Sporulation protein YpjB (SpoYpjB) KNH48_07520 PF07187 Protein of unknown function (DUF1405) KNH48_07525 PF00032 Cytochrome b(C-terminal)/b6/petD KNH48_07525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KNH48_07530 PF00033 Cytochrome b/b6/petB KNH48_07535 PF00355 Rieske [2Fe-2S] domain KNH48_07545 PF08858 IDEAL domain KNH48_07545 PF08864 UPF0302 domain KNH48_07555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KNH48_07565 PF00155 Aminotransferase class I and II KNH48_07570 PF07736 Chorismate mutase type I KNH48_07575 PF01761 3-dehydroquinate synthase KNH48_07580 PF01264 Chorismate synthase KNH48_07585 PF01739 CheR methyltransferase, SAM binding domain KNH48_07585 PF03705 CheR methyltransferase, all-alpha domain KNH48_07590 PF00334 Nucleoside diphosphate kinase KNH48_07595 PF00348 Polyprenyl synthetase KNH48_07600 PF01209 ubiE/COQ5 methyltransferase family KNH48_07610 PF02081 Tryptophan RNA-binding attenuator protein KNH48_07615 PF00216 Bacterial DNA-binding protein KNH48_07620 PF09547 Stage IV sporulation protein A (spore_IV_A) KNH48_07635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KNH48_07635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KNH48_07640 PF01926 50S ribosome-binding GTPase KNH48_07640 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KNH48_07650 PF14140 YpzI-like protein KNH48_07655 PF00575 S1 RNA binding domain KNH48_07660 PF02224 Cytidylate kinase KNH48_07665 PF07238 PilZ domain KNH48_07665 PF12945 Flagellar protein YcgR KNH48_07670 PF03413 Peptidase propeptide and YPEB domain KNH48_07670 PF14620 YpeB sporulation KNH48_07675 PF01471 Putative peptidoglycan binding domain KNH48_07675 PF07486 Cell Wall Hydrolase KNH48_07680 PF13367 PrsW family intramembrane metalloprotease KNH48_07690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KNH48_07690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KNH48_07700 PF00149 Calcineurin-like phosphoesterase KNH48_07705 PF11007 Spore coat associated protein JA (CotJA) KNH48_07710 PF12652 CotJB protein KNH48_07715 PF05067 Manganese containing catalase KNH48_07720 PF10864 Protein of unknown function (DUF2663) KNH48_07730 PF02517 CPBP intramembrane metalloprotease KNH48_07735 PF00270 DEAD/DEAH box helicase KNH48_07735 PF00271 Helicase conserved C-terminal domain KNH48_07750 PF12822 ECF transporter, substrate-specific component KNH48_07755 PF01551 Peptidase family M23 KNH48_07755 PF10145 Phage-related minor tail protein KNH48_07755 PF01464 Transglycosylase SLT domain KNH48_07760 PF18698 Histidine kinase sensor domain KNH48_07760 PF00672 HAMP domain KNH48_07760 PF00512 His Kinase A (phospho-acceptor) domain KNH48_07760 PF00989 PAS fold KNH48_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_07765 PF00072 Response regulator receiver domain KNH48_07765 PF00486 Transcriptional regulatory protein, C terminal KNH48_07770 PF01578 Cytochrome C assembly protein KNH48_07775 PF05140 ResB-like family KNH48_07780 PF00578 AhpC/TSA family KNH48_07785 PF00849 RNA pseudouridylate synthase KNH48_07785 PF01479 S4 domain KNH48_07790 PF07670 Nucleoside recognition KNH48_07795 PF07670 Nucleoside recognition KNH48_07800 PF07943 Penicillin-binding protein 5, C-terminal domain KNH48_07800 PF00768 D-alanyl-D-alanine carboxypeptidase KNH48_07805 PF04079 Segregation and condensation complex subunit ScpB KNH48_07815 PF09680 Family of unknown function KNH48_07820 PF00583 Acetyltransferase (GNAT) family KNH48_07830 PF03323 Bacillus/Clostridium GerA spore germination protein KNH48_07840 PF13782 Stage V sporulation protein AB KNH48_07845 PF12164 Stage V sporulation protein AA KNH48_07850 PF04542 Sigma-70 region 2 KNH48_07850 PF04539 Sigma-70 region 3 KNH48_07850 PF04545 Sigma-70, region 4 KNH48_07855 PF13581 Histidine kinase-like ATPase domain KNH48_07860 PF01740 STAS domain KNH48_07870 PF02899 Phage integrase, N-terminal SAM-like domain KNH48_07870 PF00589 Phage integrase family KNH48_07875 PF14004 Protein of unknown function (DUF4227) KNH48_07880 PF01475 Ferric uptake regulator family KNH48_07885 PF01944 Stage II sporulation protein M KNH48_07895 PF00293 NUDIX domain KNH48_07900 PF13072 Mother cell inhibitor of FtsZ KNH48_07905 PF00248 Aldo/keto reductase family KNH48_07915 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KNH48_07920 PF05816 Toxic anion resistance protein (TelA) KNH48_07925 PF12146 Serine aminopeptidase, S33 KNH48_07930 PF00704 Glycosyl hydrolases family 18 KNH48_07930 PF01476 LysM domain KNH48_07940 PF00817 impB/mucB/samB family KNH48_07940 PF11799 impB/mucB/samB family C-terminal domain KNH48_07945 PF00106 short chain dehydrogenase KNH48_07950 PF03807 NADP oxidoreductase coenzyme F420-dependent KNH48_07950 PF14748 Pyrroline-5-carboxylate reductase dimerisation KNH48_07955 PF12706 Beta-lactamase superfamily domain KNH48_07960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KNH48_07960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KNH48_07965 PF00817 impB/mucB/samB family KNH48_07965 PF11798 IMS family HHH motif KNH48_07965 PF11799 impB/mucB/samB family C-terminal domain KNH48_07975 PF01546 Peptidase family M20/M25/M40 KNH48_07975 PF07687 Peptidase dimerisation domain KNH48_07985 PF03734 L,D-transpeptidase catalytic domain KNH48_07990 PF06491 Disulphide isomerase KNH48_07995 PF00294 pfkB family carbohydrate kinase KNH48_08000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KNH48_08000 PF00364 Biotin-requiring enzyme KNH48_08000 PF02817 e3 binding domain KNH48_08005 PF02779 Transketolase, pyrimidine binding domain KNH48_08005 PF02780 Transketolase, C-terminal domain KNH48_08010 PF00676 Dehydrogenase E1 component KNH48_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_08015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KNH48_08025 PF00989 PAS fold KNH48_08025 PF00158 Sigma-54 interaction domain KNH48_08025 PF02954 Bacterial regulatory protein, Fis family KNH48_08040 PF03009 Glycerophosphoryl diester phosphodiesterase family KNH48_08045 PF00072 Response regulator receiver domain KNH48_08045 PF08769 Sporulation initiation factor Spo0A C terminal KNH48_08050 PF17820 PDZ domain KNH48_08050 PF05580 SpoIVB peptidase S55 KNH48_08055 PF13476 AAA domain KNH48_08060 PF01316 Arginine repressor, DNA binding domain KNH48_08060 PF02863 Arginine repressor, C-terminal domain KNH48_08065 PF01728 FtsJ-like methyltransferase KNH48_08065 PF01479 S4 domain KNH48_08070 PF02779 Transketolase, pyrimidine binding domain KNH48_08070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KNH48_08070 PF02780 Transketolase, C-terminal domain KNH48_08075 PF12323 Helix-turn-helix domain KNH48_08075 PF07282 Putative transposase DNA-binding domain KNH48_08075 PF01385 Probable transposase KNH48_08085 PF00348 Polyprenyl synthetase KNH48_08090 PF02609 Exonuclease VII small subunit KNH48_08095 PF02601 Exonuclease VII, large subunit KNH48_08095 PF13742 OB-fold nucleic acid binding domain KNH48_08100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KNH48_08100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KNH48_08105 PF01029 NusB family KNH48_08110 PF03780 Asp23 family, cell envelope-related function KNH48_08115 PF02785 Biotin carboxylase C-terminal domain KNH48_08115 PF00289 Biotin carboxylase, N-terminal domain KNH48_08115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KNH48_08120 PF00364 Biotin-requiring enzyme KNH48_08125 PF12685 SpoIIIAH-like protein KNH48_08135 PF09581 Stage III sporulation protein AF (Spore_III_AF) KNH48_08145 PF06686 Stage III sporulation protein AC/AD protein family KNH48_08150 PF06686 Stage III sporulation protein AC/AD protein family KNH48_08155 PF09548 Stage III sporulation protein AB (spore_III_AB) KNH48_08165 PF09285 Elongation factor P, C-terminal KNH48_08165 PF01132 Elongation factor P (EF-P) OB domain KNH48_08165 PF08207 Elongation factor P (EF-P) KOW-like domain KNH48_08170 PF01321 Creatinase/Prolidase N-terminal domain KNH48_08170 PF00557 Metallopeptidase family M24 KNH48_08175 PF01220 Dehydroquinase class II KNH48_08180 PF11085 Conserved membrane protein YqhR KNH48_08185 PF07136 Protein of unknown function (DUF1385) KNH48_08195 PF01734 Patatin-like phospholipase KNH48_08205 PF02803 Thiolase, C-terminal domain KNH48_08205 PF00108 Thiolase, N-terminal domain KNH48_08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_08215 PF00317 Ribonucleotide reductase, all-alpha domain KNH48_08215 PF03477 ATP cone domain KNH48_08215 PF02867 Ribonucleotide reductase, barrel domain KNH48_08225 PF00581 Rhodanese-like domain KNH48_08230 PF02347 Glycine cleavage system P-protein KNH48_08240 PF08669 Glycine cleavage T-protein C-terminal barrel domain KNH48_08240 PF01571 Aminomethyltransferase folate-binding domain KNH48_08245 PF00176 SNF2 family N-terminal domain KNH48_08245 PF00271 Helicase conserved C-terminal domain KNH48_08250 PF11079 Bacterial protein YqhG of unknown function KNH48_08260 PF01202 Shikimate kinase KNH48_08285 PF07963 Prokaryotic N-terminal methylation motif KNH48_08290 PF00482 Type II secretion system (T2SS), protein F KNH48_08295 PF00437 Type II/IV secretion system protein KNH48_08305 PF11117 Protein of unknown function (DUF2626) KNH48_08310 PF00753 Metallo-beta-lactamase superfamily KNH48_08315 PF10958 Protein of unknown function (DUF2759) KNH48_08320 PF00480 ROK family KNH48_08325 PF06014 Bacterial protein of unknown function (DUF910) KNH48_08330 PF01694 Rhomboid family KNH48_08340 PF00471 Ribosomal protein L33 KNH48_08350 PF00905 Penicillin binding protein transpeptidase domain KNH48_08350 PF03717 Penicillin-binding Protein dimerisation domain KNH48_08355 PF07690 Major Facilitator Superfamily KNH48_08360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KNH48_08360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KNH48_08370 PF04551 GcpE protein KNH48_08375 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) KNH48_08380 PF01475 Ferric uptake regulator family KNH48_08385 PF00950 ABC 3 transport family KNH48_08390 PF00005 ABC transporter KNH48_08400 PF00877 NlpC/P60 family KNH48_08410 PF00270 DEAD/DEAH box helicase KNH48_08410 PF00271 Helicase conserved C-terminal domain KNH48_08430 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KNH48_08435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KNH48_08450 PF10410 DnaB-helicase binding domain of primase KNH48_08450 PF08275 DNA primase catalytic core, N-terminal domain KNH48_08450 PF01807 CHC2 zinc finger KNH48_08455 PF03618 Kinase/pyrophosphorylase KNH48_08460 PF00571 CBS domain KNH48_08460 PF08279 HTH domain KNH48_08465 PF02565 Recombination protein O C terminal KNH48_08465 PF11967 Recombination protein O N terminal KNH48_08470 PF14006 YqzL-like protein KNH48_08475 PF07650 KH domain KNH48_08475 PF01926 50S ribosome-binding GTPase KNH48_08480 PF01219 Prokaryotic diacylglycerol kinase KNH48_08500 PF06898 Putative stage IV sporulation protein YqfD KNH48_08505 PF07873 YabP family KNH48_08510 PF09424 Yqey-like protein KNH48_08515 PF01165 Ribosomal protein S21 KNH48_08520 PF00708 Acylphosphatase KNH48_08525 PF02690 Na+/Pi-cotransporter KNH48_08530 PF00919 Uncharacterized protein family UPF0004 KNH48_08530 PF01938 TRAM domain KNH48_08530 PF04055 Radical SAM superfamily KNH48_08535 PF04452 RNA methyltransferase KNH48_08545 PF00226 DnaJ domain KNH48_08545 PF01556 DnaJ C terminal domain KNH48_08545 PF00684 DnaJ central domain KNH48_08550 PF00012 Hsp70 protein KNH48_08555 PF01025 GrpE KNH48_08560 PF01628 HrcA protein C terminal domain KNH48_08565 PF04055 Radical SAM superfamily KNH48_08565 PF06969 HemN C-terminal domain KNH48_08570 PF00679 Elongation factor G C-terminus KNH48_08570 PF00009 Elongation factor Tu GTP binding domain KNH48_08570 PF03144 Elongation factor Tu domain 2 KNH48_08570 PF06421 GTP-binding protein LepA C-terminus KNH48_08580 PF03418 Germination protease KNH48_08585 PF01649 Ribosomal protein S20 KNH48_08590 PF06144 DNA polymerase III, delta subunit KNH48_08595 PF14141 YqzM-like protein KNH48_08600 PF00753 Metallo-beta-lactamase superfamily KNH48_08600 PF03772 Competence protein KNH48_08600 PF13567 Domain of unknown function (DUF4131) KNH48_08605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KNH48_08615 PF03807 NADP oxidoreductase coenzyme F420-dependent KNH48_08615 PF14748 Pyrroline-5-carboxylate reductase dimerisation KNH48_08630 PF01966 HD domain KNH48_08635 PF01467 Cytidylyltransferase-like KNH48_08640 PF01985 CRS1 / YhbY (CRM) domain KNH48_08645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KNH48_08645 PF01488 Shikimate / quinate 5-dehydrogenase KNH48_08645 PF08501 Shikimate dehydrogenase substrate binding domain KNH48_08650 PF01926 50S ribosome-binding GTPase KNH48_08660 PF02754 Cysteine-rich domain KNH48_08660 PF13183 4Fe-4S dicluster domain KNH48_08665 PF01565 FAD binding domain KNH48_08665 PF02913 FAD linked oxidases, C-terminal domain KNH48_08675 PF07732 Multicopper oxidase KNH48_08675 PF07731 Multicopper oxidase KNH48_08680 PF00011 Hsp20/alpha crystallin family KNH48_08720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KNH48_08725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KNH48_08735 PF16916 Dimerisation domain of Zinc Transporter KNH48_08735 PF01545 Cation efflux family KNH48_08740 PF08970 Sporulation inhibitor A KNH48_08745 PF01066 CDP-alcohol phosphatidyltransferase KNH48_08750 PF04542 Sigma-70 region 2 KNH48_08750 PF04545 Sigma-70, region 4 KNH48_08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_08755 PF13192 Thioredoxin domain KNH48_08765 PF09501 Probable sporulation protein (Bac_small_yrzI) KNH48_08770 PF14143 YrhC-like protein KNH48_08775 PF01048 Phosphorylase superfamily KNH48_08785 PF07423 Domain of unknown function (DUF1510) KNH48_08790 PF01272 Transcription elongation factor, GreA/GreB, C-term KNH48_08790 PF03449 Transcription elongation factor, N-terminal KNH48_08795 PF00485 Phosphoribulokinase / Uridine kinase family KNH48_08800 PF01596 O-methyltransferase KNH48_08805 PF02618 YceG-like family KNH48_08810 PF06949 Protein of unknown function (DUF1292) KNH48_08815 PF03652 Holliday junction resolvase KNH48_08820 PF06135 IreB regulatory phosphoprotein KNH48_08850 PF01037 Lrp/AsnC ligand binding domain KNH48_08855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KNH48_08855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KNH48_08860 PF14490 Helix-hairpin-helix containing domain KNH48_08860 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KNH48_08860 PF13538 UvrD-like helicase C-terminal domain KNH48_08875 PF00266 Aminotransferase class-V KNH48_08880 PF02082 Transcriptional regulator KNH48_08890 PF05496 Holliday junction DNA helicase RuvB P-loop domain KNH48_08890 PF16193 AAA C-terminal domain KNH48_08890 PF12002 MgsA AAA+ ATPase C terminal KNH48_08895 PF00899 ThiF family KNH48_08900 PF01758 Sodium Bile acid symporter family KNH48_08915 PF03129 Anticodon binding domain KNH48_08915 PF13393 Histidyl-tRNA synthetase KNH48_08925 PF01520 N-acetylmuramoyl-L-alanine amidase KNH48_08925 PF08239 Bacterial SH3 domain KNH48_08945 PF01047 MarR family KNH48_08955 PF13291 ACT domain KNH48_08955 PF04607 Region found in RelA / SpoT proteins KNH48_08955 PF02824 TGS domain KNH48_08960 PF00156 Phosphoribosyl transferase domain KNH48_08970 PF07549 SecD/SecF GG Motif KNH48_08970 PF02355 Protein export membrane protein KNH48_08980 PF01943 Polysaccharide biosynthesis protein KNH48_08980 PF14667 Polysaccharide biosynthesis C-terminal domain KNH48_08985 PF04239 Protein of unknown function (DUF421) KNH48_08995 PF02699 Preprotein translocase subunit KNH48_09000 PF01702 Queuine tRNA-ribosyltransferase KNH48_09010 PF11146 Protein of unknown function (DUF2905) KNH48_09025 PF01709 Transcriptional regulator KNH48_09035 PF01476 LysM domain KNH48_09040 PF08279 HTH domain KNH48_09040 PF02829 3H domain KNH48_09045 PF01842 ACT domain KNH48_09045 PF00800 Prephenate dehydratase KNH48_09050 PF01842 ACT domain KNH48_09055 PF09269 Domain of unknown function (DUF1967) KNH48_09055 PF01018 GTP1/OBG KNH48_09055 PF01926 50S ribosome-binding GTPase KNH48_09060 PF14682 Sporulation initiation phospho-transferase B, C-terminal KNH48_09060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KNH48_09065 PF01016 Ribosomal L27 protein KNH48_09070 PF04327 Cysteine protease Prp KNH48_09075 PF00829 Ribosomal prokaryotic L21 protein KNH48_09080 PF10150 Ribonuclease E/G family KNH48_09080 PF00575 S1 RNA binding domain KNH48_09085 PF02163 Peptidase family M50 KNH48_09095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KNH48_09100 PF03775 Septum formation inhibitor MinC, C-terminal domain KNH48_09110 PF04085 rod shape-determining protein MreC KNH48_09120 PF04002 RadC-like JAB domain KNH48_09130 PF06750 Bacterial Peptidase A24 N-terminal domain KNH48_09130 PF01478 Type IV leader peptidase family KNH48_09155 PF00482 Type II secretion system (T2SS), protein F KNH48_09160 PF00437 Type II/IV secretion system protein KNH48_09165 PF00437 Type II/IV secretion system protein KNH48_09165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KNH48_09205 PF10458 Valyl tRNA synthetase tRNA binding arm KNH48_09205 PF08264 Anticodon-binding domain of tRNA KNH48_09205 PF00133 tRNA synthetases class I (I, L, M and V) KNH48_09220 PF01476 LysM domain KNH48_09220 PF01476 LysM domain KNH48_09225 PF00202 Aminotransferase class-III KNH48_09230 PF00490 Delta-aminolevulinic acid dehydratase KNH48_09245 PF03900 Porphobilinogen deaminase, C-terminal domain KNH48_09245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KNH48_09250 PF01578 Cytochrome C assembly protein KNH48_09255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KNH48_09255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KNH48_09255 PF01488 Shikimate / quinate 5-dehydrogenase KNH48_09265 PF01926 50S ribosome-binding GTPase KNH48_09270 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_09270 PF05362 Lon protease (S16) C-terminal proteolytic domain KNH48_09270 PF02190 ATP-dependent protease La (LON) substrate-binding domain KNH48_09275 PF00004 ATPase family associated with various cellular activities (AAA) KNH48_09275 PF05362 Lon protease (S16) C-terminal proteolytic domain KNH48_09280 PF10431 C-terminal, D2-small domain, of ClpB protein KNH48_09280 PF07724 AAA domain (Cdc48 subfamily) KNH48_09280 PF06689 ClpX C4-type zinc finger KNH48_09285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KNH48_09285 PF05698 Bacterial trigger factor protein (TF) C-terminus KNH48_09285 PF05697 Bacterial trigger factor protein (TF) KNH48_09295 PF10710 Protein of unknown function (DUF2512) KNH48_09310 PF12850 Calcineurin-like phosphoesterase superfamily domain KNH48_09315 PF01725 Ham1 family KNH48_09320 PF13823 Alcohol dehydrogenase GroES-associated KNH48_09320 PF08240 Alcohol dehydrogenase GroES-like domain KNH48_09320 PF00107 Zinc-binding dehydrogenase KNH48_09335 PF01177 Asp/Glu/Hydantoin racemase KNH48_09340 PF01047 MarR family KNH48_09350 PF12323 Helix-turn-helix domain KNH48_09350 PF07282 Putative transposase DNA-binding domain KNH48_09350 PF01385 Probable transposase KNH48_09360 PF00196 Bacterial regulatory proteins, luxR family KNH48_09365 PF03061 Thioesterase superfamily KNH48_09370 PF13085 2Fe-2S iron-sulfur cluster binding domain KNH48_09370 PF13183 4Fe-4S dicluster domain KNH48_09375 PF00890 FAD binding domain KNH48_09375 PF02910 Fumarate reductase flavoprotein C-term KNH48_09380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KNH48_09385 PF10702 Protein of unknown function (DUF2507) KNH48_09390 PF00696 Amino acid kinase family KNH48_09390 PF13840 ACT domain KNH48_09395 PF01541 GIY-YIG catalytic domain KNH48_09395 PF08459 UvrC Helix-hairpin-helix N-terminal KNH48_09395 PF02151 UvrB/uvrC motif KNH48_09400 PF00085 Thioredoxin KNH48_09405 PF00766 Electron transfer flavoprotein FAD-binding domain KNH48_09405 PF01012 Electron transfer flavoprotein domain KNH48_09410 PF01012 Electron transfer flavoprotein domain KNH48_09415 PF00378 Enoyl-CoA hydratase/isomerase KNH48_09420 PF08359 YsiA-like protein, C-terminal region KNH48_09420 PF00440 Bacterial regulatory proteins, tetR family KNH48_09425 PF00501 AMP-binding enzyme KNH48_09425 PF13193 AMP-binding enzyme C-terminal domain KNH48_09435 PF14791 DNA polymerase beta thumb KNH48_09435 PF02811 PHP domain KNH48_09435 PF14716 Helix-hairpin-helix domain KNH48_09440 PF02674 Colicin V production protein KNH48_09445 PF05164 Cell division protein ZapA KNH48_09450 PF11858 Domain of unknown function (DUF3378) KNH48_09450 PF01351 Ribonuclease HII KNH48_09460 PF03147 Ferredoxin-fold anticodon binding domain KNH48_09460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KNH48_09460 PF03483 B3/4 domain KNH48_09460 PF03484 tRNA synthetase B5 domain KNH48_09460 PF01588 Putative tRNA binding domain KNH48_09465 PF01409 tRNA synthetases class II core domain (F) KNH48_09465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KNH48_09470 PF00588 SpoU rRNA Methylase family KNH48_09470 PF08032 RNA 2'-O ribose methyltransferase substrate binding KNH48_09475 PF14098 Small, acid-soluble spore protein I KNH48_09495 PF03551 Transcriptional regulator PadR-like family KNH48_09505 PF06508 Queuosine biosynthesis protein QueC KNH48_09515 PF03358 NADPH-dependent FMN reductase KNH48_09520 PF05343 M42 glutamyl aminopeptidase KNH48_09525 PF00692 dUTPase KNH48_09535 PF00453 Ribosomal protein L20 KNH48_09540 PF01632 Ribosomal protein L35 KNH48_09560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KNH48_09560 PF03129 Anticodon binding domain KNH48_09560 PF02824 TGS domain KNH48_09560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KNH48_09565 PF08812 YtxC-like family KNH48_09580 PF03477 ATP cone domain KNH48_09595 PF01121 Dephospho-CoA kinase KNH48_09600 PF02659 Putative manganese efflux pump KNH48_09605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KNH48_09605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KNH48_09605 PF06827 Zinc finger found in FPG and IleRS KNH48_09610 PF01367 5'-3' exonuclease, C-terminal SAM fold KNH48_09610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KNH48_09610 PF00476 DNA polymerase family A KNH48_09615 PF00056 lactate/malate dehydrogenase, NAD binding domain KNH48_09615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KNH48_09620 PF00180 Isocitrate/isopropylmalate dehydrogenase KNH48_09625 PF00285 Citrate synthase, C-terminal domain KNH48_09630 PF04284 Protein of unknown function (DUF441) KNH48_09635 PF01594 AI-2E family transporter KNH48_09640 PF00391 PEP-utilising enzyme, mobile domain KNH48_09640 PF00224 Pyruvate kinase, barrel domain KNH48_09640 PF02887 Pyruvate kinase, alpha/beta domain KNH48_09645 PF00365 Phosphofructokinase KNH48_09650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KNH48_09655 PF01039 Carboxyl transferase domain KNH48_09655 PF17848 Acetyl-coA carboxylase zinc finger domain KNH48_09660 PF00390 Malic enzyme, N-terminal domain KNH48_09660 PF03949 Malic enzyme, NAD binding domain KNH48_09665 PF07733 Bacterial DNA polymerase III alpha NTPase domain KNH48_09665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KNH48_09665 PF14579 Helix-hairpin-helix motif KNH48_09665 PF02811 PHP domain KNH48_09665 PF01336 OB-fold nucleic acid binding domain KNH48_09670 PF14034 Sporulation protein YtrH KNH48_09680 PF01368 DHH family KNH48_09680 PF02272 DHHA1 domain KNH48_09705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KNH48_09705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KNH48_09710 PF00582 Universal stress protein family KNH48_09720 PF00871 Acetokinase family KNH48_09730 PF08534 Redoxin KNH48_09735 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KNH48_09745 PF06271 RDD family KNH48_09750 PF01343 Peptidase family S49 KNH48_09755 PF00501 AMP-binding enzyme KNH48_09755 PF13193 AMP-binding enzyme C-terminal domain KNH48_09760 PF00269 Small, acid-soluble spore proteins, alpha/beta type KNH48_09765 PF02568 Thiamine biosynthesis protein (ThiI) KNH48_09765 PF02926 THUMP domain KNH48_09775 PF06160 Septation ring formation regulator, EzrA KNH48_09780 PF00440 Bacterial regulatory proteins, tetR family KNH48_09785 PF13185 GAF domain KNH48_09790 PF00990 Diguanylate cyclase, GGDEF domain KNH48_09795 PF00163 Ribosomal protein S4/S9 N-terminal domain KNH48_09795 PF01479 S4 domain KNH48_09810 PF01619 Proline dehydrogenase KNH48_09825 PF01479 S4 domain KNH48_09825 PF00579 tRNA synthetases class I (W and Y) KNH48_09830 PF02634 FdhD/NarQ family KNH48_09835 PF00037 4Fe-4S binding domain KNH48_09835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KNH48_09835 PF00384 Molybdopterin oxidoreductase KNH48_09835 PF01568 Molydopterin dinucleotide binding domain KNH48_09835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KNH48_09840 PF07849 Protein of unknown function (DUF1641) KNH48_09845 PF00899 ThiF family KNH48_09850 PF01967 MoaC family KNH48_09855 PF02597 ThiS family KNH48_09860 PF02391 MoaE protein KNH48_09865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KNH48_09870 PF00994 Probable molybdopterin binding domain KNH48_09870 PF03454 MoeA C-terminal region (domain IV) KNH48_09870 PF03453 MoeA N-terminal region (domain I and II) KNH48_09875 PF12804 MobA-like NTP transferase domain KNH48_09880 PF00994 Probable molybdopterin binding domain KNH48_09885 PF06463 Molybdenum Cofactor Synthesis C KNH48_09885 PF04055 Radical SAM superfamily KNH48_09890 PF00005 ABC transporter KNH48_09890 PF08402 TOBE domain KNH48_09895 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_09905 PF00501 AMP-binding enzyme KNH48_09905 PF13193 AMP-binding enzyme C-terminal domain KNH48_09910 PF00583 Acetyltransferase (GNAT) family KNH48_09915 PF00571 CBS domain KNH48_09925 PF00356 Bacterial regulatory proteins, lacI family KNH48_09930 PF00793 DAHP synthetase I family KNH48_09930 PF01817 Chorismate mutase type II KNH48_09945 PF01225 Mur ligase family, catalytic domain KNH48_09945 PF08245 Mur ligase middle domain KNH48_09945 PF02875 Mur ligase family, glutamate ligase domain KNH48_09950 PF09397 Ftsk gamma domain KNH48_09950 PF01580 FtsK/SpoIIIE family KNH48_09950 PF17854 FtsK alpha domain KNH48_09955 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KNH48_09965 PF07285 Protein of unknown function (DUF1444) KNH48_09970 PF00085 Thioredoxin KNH48_09975 PF13426 PAS domain KNH48_09975 PF07228 Stage II sporulation protein E (SpoIIE) KNH48_09990 PF03413 Peptidase propeptide and YPEB domain KNH48_09995 PF00753 Metallo-beta-lactamase superfamily KNH48_10000 PF02390 Putative methyltransferase KNH48_10005 PF14165 YtzH-like protein KNH48_10020 PF02834 LigT like Phosphoesterase KNH48_10035 PF08220 DeoR-like helix-turn-helix domain KNH48_10040 PF01943 Polysaccharide biosynthesis protein KNH48_10040 PF14667 Polysaccharide biosynthesis C-terminal domain KNH48_10045 PF10957 Sporulation protein Cse60 KNH48_10065 PF07690 Major Facilitator Superfamily KNH48_10070 PF10732 Protein of unknown function (DUF2524) KNH48_10080 PF06962 Putative rRNA methylase KNH48_10090 PF12146 Serine aminopeptidase, S33 KNH48_10100 PF00733 Asparagine synthase KNH48_10100 PF13537 Glutamine amidotransferase domain KNH48_10105 PF02773 S-adenosylmethionine synthetase, C-terminal domain KNH48_10105 PF02772 S-adenosylmethionine synthetase, central domain KNH48_10105 PF00438 S-adenosylmethionine synthetase, N-terminal domain KNH48_10110 PF01293 Phosphoenolpyruvate carboxykinase KNH48_10130 PF03358 NADPH-dependent FMN reductase KNH48_10145 PF00005 ABC transporter KNH48_10150 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_10165 PF00210 Ferritin-like domain KNH48_10170 PF01809 Putative membrane protein insertion efficiency factor KNH48_10180 PF01297 Zinc-uptake complex component A periplasmic KNH48_10185 PF07561 Domain of Unknown Function (DUF1540) KNH48_10190 PF13378 Enolase C-terminal domain-like KNH48_10190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KNH48_10195 PF13193 AMP-binding enzyme C-terminal domain KNH48_10195 PF00501 AMP-binding enzyme KNH48_10200 PF00378 Enoyl-CoA hydratase/isomerase KNH48_10225 PF01040 UbiA prenyltransferase family KNH48_10370 PF02308 MgtC family KNH48_10390 PF00403 Heavy-metal-associated domain KNH48_10400 PF01037 Lrp/AsnC ligand binding domain KNH48_10410 PF07687 Peptidase dimerisation domain KNH48_10410 PF01546 Peptidase family M20/M25/M40 KNH48_10420 PF00474 Sodium:solute symporter family KNH48_10430 PF03860 Domain of Unknown Function (DUF326) KNH48_10440 PF01522 Polysaccharide deacetylase KNH48_10455 PF01522 Polysaccharide deacetylase KNH48_10475 PF00654 Voltage gated chloride channel KNH48_10485 PF00581 Rhodanese-like domain KNH48_10490 PF02583 Metal-sensitive transcriptional repressor KNH48_10495 PF00565 Staphylococcal nuclease homologue KNH48_10495 PF05901 Excalibur calcium-binding domain KNH48_10500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_10510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_10510 PF00672 HAMP domain KNH48_10510 PF02743 Cache domain KNH48_10530 PF02681 Divergent PAP2 family KNH48_10540 PF01266 FAD dependent oxidoreductase KNH48_10545 PF00171 Aldehyde dehydrogenase family KNH48_10550 PF02423 Ornithine cyclodeaminase/mu-crystallin family KNH48_10570 PF07885 Ion channel KNH48_10570 PF02254 TrkA-N domain KNH48_10575 PF00342 Phosphoglucose isomerase KNH48_10580 PF04070 Domain of unknown function (DUF378) KNH48_10590 PF00575 S1 RNA binding domain KNH48_10600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KNH48_10605 PF00248 Aldo/keto reductase family KNH48_10610 PF00248 Aldo/keto reductase family KNH48_10625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KNH48_10630 PF08810 Kinase associated protein B KNH48_10635 PF07690 Major Facilitator Superfamily KNH48_10640 PF03061 Thioesterase superfamily KNH48_10650 PF03845 Spore germination protein KNH48_10655 PF05504 Spore germination B3/ GerAC like, C-terminal KNH48_10660 PF03323 Bacillus/Clostridium GerA spore germination protein KNH48_10675 PF06725 3D domain KNH48_10680 PF14068 Putative membrane protein KNH48_10685 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_10690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_10695 PF01521 Iron-sulphur cluster biosynthesis KNH48_10700 PF07315 Protein of unknown function (DUF1462) KNH48_10705 PF01106 NifU-like domain KNH48_10715 PF04608 Phosphatidylglycerophosphatase A KNH48_10720 PF13344 Haloacid dehalogenase-like hydrolase KNH48_10725 PF01934 Protein of unknown function DUF86 KNH48_10730 PF06265 Protein of unknown function (DUF1027) KNH48_10735 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KNH48_10735 PF04055 Radical SAM superfamily KNH48_10740 PF01551 Peptidase family M23 KNH48_10745 PF09560 Sporulation protein YunB (Spo_YunB) KNH48_10750 PF08827 Domain of unknown function (DUF1805) KNH48_10765 PF01592 NifU-like N terminal domain KNH48_10770 PF00266 Aminotransferase class-V KNH48_10780 PF00005 ABC transporter KNH48_10790 PF00085 Thioredoxin KNH48_10795 PF01597 Glycine cleavage H-protein KNH48_10800 PF03960 ArsC family KNH48_10805 PF02770 Acyl-CoA dehydrogenase, middle domain KNH48_10805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KNH48_10805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KNH48_10810 PF02803 Thiolase, C-terminal domain KNH48_10810 PF00108 Thiolase, N-terminal domain KNH48_10815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KNH48_10815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KNH48_10815 PF00378 Enoyl-CoA hydratase/isomerase KNH48_10820 PF14115 YuzL-like protein KNH48_10830 PF07875 Coat F domain KNH48_10835 PF01098 Cell cycle protein KNH48_10840 PF00085 Thioredoxin KNH48_10855 PF00873 AcrB/AcrD/AcrF family KNH48_10860 PF00563 EAL domain KNH48_10860 PF00990 Diguanylate cyclase, GGDEF domain KNH48_10860 PF03707 Bacterial signalling protein N terminal repeat KNH48_10865 PF06628 Catalase-related immune-responsive KNH48_10865 PF00199 Catalase KNH48_10875 PF01522 Polysaccharide deacetylase KNH48_10895 PF04542 Sigma-70 region 2 KNH48_10895 PF08281 Sigma-70, region 4 KNH48_10900 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KNH48_10915 PF04055 Radical SAM superfamily KNH48_10915 PF06968 Biotin and Thiamin Synthesis associated domain KNH48_10950 PF01668 SmpB protein KNH48_10955 PF08206 Ribonuclease B OB domain KNH48_10955 PF00773 RNB domain KNH48_10955 PF00575 S1 RNA binding domain KNH48_10955 PF17876 Cold shock domain KNH48_10960 PF12146 Serine aminopeptidase, S33 KNH48_10965 PF03840 Preprotein translocase SecG subunit KNH48_10970 PF00113 Enolase, C-terminal TIM barrel domain KNH48_10970 PF03952 Enolase, N-terminal domain KNH48_10975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KNH48_10975 PF01676 Metalloenzyme superfamily KNH48_10980 PF00121 Triosephosphate isomerase KNH48_10985 PF00162 Phosphoglycerate kinase KNH48_10990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KNH48_10990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KNH48_10995 PF04198 Putative sugar-binding domain KNH48_11010 PF00309 Sigma-54 factor, Activator interacting domain (AID) KNH48_11010 PF04963 Sigma-54 factor, core binding domain KNH48_11010 PF04552 Sigma-54, DNA binding domain KNH48_11025 PF12838 4Fe-4S dicluster domain KNH48_11025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KNH48_11025 PF00384 Molybdopterin oxidoreductase KNH48_11025 PF01568 Molydopterin dinucleotide binding domain KNH48_11025 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KNH48_11040 PF00912 Transglycosylase KNH48_11040 PF00905 Penicillin binding protein transpeptidase domain KNH48_11055 PF00005 ABC transporter KNH48_11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KNH48_11060 PF00877 NlpC/P60 family KNH48_11065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KNH48_11070 PF00005 ABC transporter KNH48_11070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KNH48_11075 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_11075 PF12911 N-terminal TM domain of oligopeptide transport permease C KNH48_11080 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_11085 PF07722 Peptidase C26 KNH48_11090 PF01544 CorA-like Mg2+ transporter protein KNH48_11095 PF14148 YhdB-like protein KNH48_11100 PF04293 SpoVR like protein KNH48_11105 PF01757 Acyltransferase family KNH48_11115 PF02600 Disulfide bond formation protein DsbB KNH48_11130 PF01865 Protein of unknown function DUF47 KNH48_11135 PF01384 Phosphate transporter family KNH48_11150 PF04285 Protein of unknown function (DUF444) KNH48_11165 PF00588 SpoU rRNA Methylase family KNH48_11175 PF08331 Domain of unknown function (DUF1730) KNH48_11180 PF01914 MarC family integral membrane protein KNH48_11185 PF01368 DHH family KNH48_11185 PF02833 DHHA2 domain KNH48_11190 PF02915 Rubrerythrin KNH48_11195 PF00497 Bacterial extracellular solute-binding proteins, family 3 KNH48_11200 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_11205 PF00005 ABC transporter KNH48_11210 PF01226 Formate/nitrite transporter KNH48_11215 PF10920 Protein of unknown function (DUF2705) KNH48_11220 PF01228 Glycine radical KNH48_11220 PF02901 Pyruvate formate lyase-like KNH48_11225 PF04055 Radical SAM superfamily KNH48_11230 PF03358 NADPH-dependent FMN reductase KNH48_11245 PF00005 ABC transporter KNH48_11300 PF00324 Amino acid permease KNH48_11310 PF12822 ECF transporter, substrate-specific component KNH48_11315 PF07702 UTRA domain KNH48_11315 PF00392 Bacterial regulatory proteins, gntR family KNH48_11325 PF00854 POT family KNH48_11330 PF01266 FAD dependent oxidoreductase KNH48_11345 PF00202 Aminotransferase class-III KNH48_11360 PF01022 Bacterial regulatory protein, arsR family KNH48_11365 PF01451 Low molecular weight phosphotyrosine protein phosphatase KNH48_11370 PF02040 Arsenical pump membrane protein KNH48_11375 PF01022 Bacterial regulatory protein, arsR family KNH48_11385 PF00672 HAMP domain KNH48_11385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_11385 PF00512 His Kinase A (phospho-acceptor) domain KNH48_11390 PF00072 Response regulator receiver domain KNH48_11390 PF00486 Transcriptional regulatory protein, C terminal KNH48_11400 PF05690 Thiazole biosynthesis protein ThiG KNH48_11410 PF01266 FAD dependent oxidoreductase KNH48_11415 PF02581 Thiamine monophosphate synthase KNH48_11420 PF05977 Transmembrane secretion effector KNH48_11425 PF07690 Major Facilitator Superfamily KNH48_11445 PF00296 Luciferase-like monooxygenase KNH48_11450 PF04239 Protein of unknown function (DUF421) KNH48_11545 PF18576 Helix-turn-helix domain KNH48_11545 PF14540 Nucleotidyltransferase-like KNH48_11550 PF11023 Zinc-ribbon containing domain KNH48_11555 PF03306 Alpha-acetolactate decarboxylase KNH48_11560 PF00205 Thiamine pyrophosphate enzyme, central domain KNH48_11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KNH48_11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KNH48_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_11565 PF03466 LysR substrate binding domain KNH48_11570 PF00027 Cyclic nucleotide-binding domain KNH48_11570 PF13545 Crp-like helix-turn-helix domain KNH48_11575 PF01475 Ferric uptake regulator family KNH48_11580 PF01923 Cobalamin adenosyltransferase KNH48_11590 PF00202 Aminotransferase class-III KNH48_11595 PF10942 Protein of unknown function (DUF2619) KNH48_11600 PF06081 Aromatic acid exporter family member 1 KNH48_11605 PF01418 Helix-turn-helix domain, rpiR family KNH48_11605 PF01380 SIS domain KNH48_11610 PF00367 phosphotransferase system, EIIB KNH48_11610 PF02378 Phosphotransferase system, EIIC KNH48_11615 PF13580 SIS domain KNH48_11630 PF04167 Protein of unknown function (DUF402) KNH48_11635 PF14182 YgaB-like protein KNH48_11650 PF03466 LysR substrate binding domain KNH48_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_11655 PF00310 Glutamine amidotransferases class-II KNH48_11655 PF04898 Glutamate synthase central domain KNH48_11655 PF01645 Conserved region in glutamate synthase KNH48_11655 PF01493 GXGXG motif KNH48_11660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KNH48_11660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_11680 PF08176 Small acid-soluble spore protein K family KNH48_11685 PF04307 LexA-binding, inner membrane-associated putative hydrolase KNH48_11690 PF14815 NUDIX domain KNH48_11690 PF00730 HhH-GPD superfamily base excision DNA repair protein KNH48_11700 PF08838 Protein of unknown function (DUF1811) KNH48_11705 PF02631 RecX family KNH48_11715 PF14151 YfhD-like protein KNH48_11720 PF00290 Tryptophan synthase alpha chain KNH48_11745 PF00117 Glutamine amidotransferase class-I KNH48_11745 PF02885 Glycosyl transferase family, helical bundle domain KNH48_11745 PF00591 Glycosyl transferase family, a/b domain KNH48_11755 PF02687 FtsX-like permease family KNH48_11755 PF12704 MacB-like periplasmic core domain KNH48_11760 PF02687 FtsX-like permease family KNH48_11760 PF12704 MacB-like periplasmic core domain KNH48_11760 PF00005 ABC transporter KNH48_11765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KNH48_11780 PF00005 ABC transporter KNH48_11790 PF09221 Bacteriocin class IId cyclical uberolysin-like KNH48_11810 PF00293 NUDIX domain KNH48_11820 PF00343 Carbohydrate phosphorylase KNH48_11825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_11825 PF00672 HAMP domain KNH48_11825 PF02743 Cache domain KNH48_11835 PF00266 Aminotransferase class-V KNH48_11840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KNH48_11840 PF01842 ACT domain KNH48_11840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KNH48_11850 PF13419 Haloacid dehalogenase-like hydrolase KNH48_11855 PF13291 ACT domain KNH48_11855 PF00291 Pyridoxal-phosphate dependent enzyme KNH48_11860 PF00694 Aconitase C-terminal domain KNH48_11865 PF00330 Aconitase family (aconitate hydratase) KNH48_11875 PF08502 LeuA allosteric (dimerisation) domain KNH48_11875 PF00682 HMGL-like KNH48_11880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KNH48_11880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KNH48_11885 PF01842 ACT domain KNH48_11885 PF10369 Small subunit of acetolactate synthase KNH48_11890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KNH48_11890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KNH48_11890 PF00205 Thiamine pyrophosphate enzyme, central domain KNH48_11900 PF05525 Branched-chain amino acid transport protein KNH48_11905 PF01740 STAS domain KNH48_11920 PF01027 Inhibitor of apoptosis-promoting Bax1 KNH48_11925 PF01717 Cobalamin-independent synthase, Catalytic domain KNH48_11945 PF04397 LytTr DNA-binding domain KNH48_11945 PF00072 Response regulator receiver domain KNH48_11950 PF07694 5TMR of 5TMR-LYT KNH48_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_11950 PF06580 Histidine kinase KNH48_11955 PF17763 Glutaminase/Asparaginase C-terminal domain KNH48_11955 PF00710 Asparaginase, N-terminal KNH48_11960 PF07731 Multicopper oxidase KNH48_11960 PF07732 Multicopper oxidase KNH48_11960 PF00394 Multicopper oxidase KNH48_11965 PF00440 Bacterial regulatory proteins, tetR family KNH48_11965 PF17932 Tetracyclin repressor-like, C-terminal domain KNH48_11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_11995 PF00672 HAMP domain KNH48_12000 PF05675 Protein of unknown function (DUF817) KNH48_12005 PF13443 Cro/C1-type HTH DNA-binding domain KNH48_12010 PF11188 Protein of unknown function (DUF2975) KNH48_12020 PF00375 Sodium:dicarboxylate symporter family KNH48_12025 PF04306 Protein of unknown function (DUF456) KNH48_12045 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) KNH48_12060 PF05958 tRNA (Uracil-5-)-methyltransferase KNH48_12060 PF01938 TRAM domain KNH48_12065 PF00730 HhH-GPD superfamily base excision DNA repair protein KNH48_12070 PF01522 Polysaccharide deacetylase KNH48_12085 PF01699 Sodium/calcium exchanger protein KNH48_12090 PF07690 Major Facilitator Superfamily KNH48_12095 PF03631 Virulence factor BrkB KNH48_12100 PF06569 Protein of unknown function (DUF1128) KNH48_12105 PF00557 Metallopeptidase family M24 KNH48_12115 PF01965 DJ-1/PfpI family KNH48_12120 PF13677 Membrane MotB of proton-channel complex MotA/MotB KNH48_12120 PF00691 OmpA family KNH48_12125 PF01618 MotA/TolQ/ExbB proton channel family KNH48_12130 PF09350 Domain of unknown function (DUF1992) KNH48_12140 PF04343 Protein of unknown function, DUF488 KNH48_12145 PF07690 Major Facilitator Superfamily KNH48_12150 PF01258 Prokaryotic dksA/traR C4-type zinc finger KNH48_12155 PF03061 Thioesterase superfamily KNH48_12165 PF15975 Flotillin KNH48_12165 PF01145 SPFH domain / Band 7 family KNH48_12175 PF01053 Cys/Met metabolism PLP-dependent enzyme KNH48_12180 PF00291 Pyridoxal-phosphate dependent enzyme KNH48_12185 PF02664 S-Ribosylhomocysteinase (LuxS) KNH48_12190 PF08241 Methyltransferase domain KNH48_12195 PF00484 Carbonic anhydrase KNH48_12215 PF00196 Bacterial regulatory proteins, luxR family KNH48_12215 PF00072 Response regulator receiver domain KNH48_12235 PF06207 Protein of unknown function (DUF1002) KNH48_12240 PF02872 5'-nucleotidase, C-terminal domain KNH48_12240 PF00149 Calcineurin-like phosphoesterase KNH48_12245 PF00375 Sodium:dicarboxylate symporter family KNH48_12250 PF00300 Histidine phosphatase superfamily (branch 1) KNH48_12255 PF01381 Helix-turn-helix KNH48_12270 PF09827 CRISPR associated protein Cas2 KNH48_12275 PF01867 CRISPR associated protein Cas1 KNH48_12310 PF01385 Probable transposase KNH48_12310 PF12323 Helix-turn-helix domain KNH48_12310 PF07282 Putative transposase DNA-binding domain KNH48_12320 PF00271 Helicase conserved C-terminal domain KNH48_12320 PF04434 SWIM zinc finger KNH48_12320 PF00176 SNF2 family N-terminal domain KNH48_12325 PF00881 Nitroreductase family KNH48_12335 PF01070 FMN-dependent dehydrogenase KNH48_12340 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KNH48_12345 PF12728 Helix-turn-helix domain KNH48_12350 PF00999 Sodium/hydrogen exchanger family KNH48_12355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KNH48_12355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KNH48_12360 PF08220 DeoR-like helix-turn-helix domain KNH48_12360 PF00455 DeoR C terminal sensor domain KNH48_12365 PF00465 Iron-containing alcohol dehydrogenase KNH48_12370 PF04405 Domain of Unknown function (DUF542) KNH48_12370 PF01814 Hemerythrin HHE cation binding domain KNH48_12390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_12400 PF04055 Radical SAM superfamily KNH48_12415 PF17370 Family of unknown function (DUF5392) KNH48_12425 PF00202 Aminotransferase class-III KNH48_12430 PF03610 PTS system fructose IIA component KNH48_12435 PF02734 DAK2 domain KNH48_12440 PF02733 Dak1 domain KNH48_12450 PF13386 Cytochrome C biogenesis protein transmembrane region KNH48_12455 PF01774 UreD urease accessory protein KNH48_12460 PF02492 CobW/HypB/UreG, nucleotide-binding domain KNH48_12465 PF01730 UreF KNH48_12470 PF05194 UreE urease accessory protein, C-terminal domain KNH48_12470 PF02814 UreE urease accessory protein, N-terminal domain KNH48_12475 PF01979 Amidohydrolase family KNH48_12475 PF00449 Urease alpha-subunit, N-terminal domain KNH48_12485 PF00547 Urease, gamma subunit KNH48_12500 PF00795 Carbon-nitrogen hydrolase KNH48_12505 PF00158 Sigma-54 interaction domain KNH48_12505 PF02954 Bacterial regulatory protein, Fis family KNH48_12505 PF13188 PAS domain KNH48_12510 PF00881 Nitroreductase family KNH48_12515 PF00324 Amino acid permease KNH48_12525 PF00860 Permease family KNH48_12530 PF12323 Helix-turn-helix domain KNH48_12530 PF01385 Probable transposase KNH48_12530 PF07282 Putative transposase DNA-binding domain KNH48_12540 PF00860 Permease family KNH48_12545 PF00580 UvrD/REP helicase N-terminal domain KNH48_12545 PF13361 UvrD-like helicase C-terminal domain KNH48_12550 PF00253 Ribosomal protein S14p/S29e KNH48_12555 PF01076 Plasmid recombination enzyme KNH48_12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase KNH48_12575 PF00202 Aminotransferase class-III KNH48_12580 PF00158 Sigma-54 interaction domain KNH48_12580 PF13426 PAS domain KNH48_12580 PF02954 Bacterial regulatory protein, Fis family KNH48_12585 PF01420 Type I restriction modification DNA specificity domain KNH48_12590 PF02384 N-6 DNA Methylase KNH48_12605 PF00324 Amino acid permease KNH48_12610 PF00440 Bacterial regulatory proteins, tetR family KNH48_12625 PF00005 ABC transporter KNH48_12630 PF00274 Fructose-bisphosphate aldolase class-I KNH48_12660 PF00293 NUDIX domain KNH48_12665 PF14338 Mrr N-terminal domain KNH48_12665 PF04471 Restriction endonuclease KNH48_12680 PF02384 N-6 DNA Methylase KNH48_12680 PF12161 HsdM N-terminal domain KNH48_12710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_12725 PF08892 YqcI/YcgG family KNH48_12740 PF01022 Bacterial regulatory protein, arsR family KNH48_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_12745 PF03466 LysR substrate binding domain KNH48_12755 PF04055 Radical SAM superfamily KNH48_12770 PF08240 Alcohol dehydrogenase GroES-like domain KNH48_12770 PF00107 Zinc-binding dehydrogenase KNH48_12775 PF02595 Glycerate kinase family KNH48_12790 PF13407 Periplasmic binding protein domain KNH48_12795 PF02653 Branched-chain amino acid transport system / permease component KNH48_12800 PF00005 ABC transporter KNH48_12805 PF05025 RbsD / FucU transport protein family KNH48_12810 PF00294 pfkB family carbohydrate kinase KNH48_12815 PF00356 Bacterial regulatory proteins, lacI family KNH48_12830 PF01348 Type II intron maturase KNH48_12830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KNH48_12835 PF00664 ABC transporter transmembrane region KNH48_12835 PF00005 ABC transporter KNH48_12850 PF01476 LysM domain KNH48_12850 PF00877 NlpC/P60 family KNH48_12885 PF00795 Carbon-nitrogen hydrolase KNH48_12885 PF00583 Acetyltransferase (GNAT) family KNH48_12890 PF10055 Uncharacterized small protein (DUF2292) KNH48_12895 PF03358 NADPH-dependent FMN reductase KNH48_12900 PF00005 ABC transporter KNH48_12910 PF00296 Luciferase-like monooxygenase KNH48_12915 PF09084 NMT1/THI5 like KNH48_12920 PF00478 IMP dehydrogenase / GMP reductase domain KNH48_12925 PF08267 Cobalamin-independent synthase, N-terminal domain KNH48_12925 PF01717 Cobalamin-independent synthase, Catalytic domain KNH48_12930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KNH48_12935 PF01791 DeoC/LacD family aldolase KNH48_12945 PF01676 Metalloenzyme superfamily KNH48_12955 PF01048 Phosphorylase superfamily KNH48_12960 PF01773 Na+ dependent nucleoside transporter N-terminus KNH48_12960 PF07662 Na+ dependent nucleoside transporter C-terminus KNH48_12965 PF00860 Permease family KNH48_12970 PF01470 Pyroglutamyl peptidase KNH48_12975 PF07690 Major Facilitator Superfamily KNH48_12980 PF02566 OsmC-like protein KNH48_12985 PF00005 ABC transporter KNH48_12990 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_12995 PF00497 Bacterial extracellular solute-binding proteins, family 3 KNH48_13005 PF00183 Hsp90 protein KNH48_13035 PF01266 FAD dependent oxidoreductase KNH48_13045 PF00107 Zinc-binding dehydrogenase KNH48_13045 PF08240 Alcohol dehydrogenase GroES-like domain KNH48_13075 PF05958 tRNA (Uracil-5-)-methyltransferase KNH48_13075 PF01938 TRAM domain KNH48_13075 PF02475 Met-10+ like-protein KNH48_13080 PF00474 Sodium:solute symporter family KNH48_13085 PF00781 Diacylglycerol kinase catalytic domain KNH48_13110 PF02637 GatB domain KNH48_13110 PF02934 GatB/GatE catalytic domain KNH48_13120 PF02686 Glu-tRNAGln amidotransferase C subunit KNH48_13140 PF07537 CamS sex pheromone cAM373 precursor KNH48_13155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KNH48_13160 PF13361 UvrD-like helicase C-terminal domain KNH48_13160 PF00580 UvrD/REP helicase N-terminal domain KNH48_13165 PF01884 PcrB family KNH48_13175 PF11258 Protein of unknown function (DUF3048) N-terminal domain KNH48_13175 PF17479 Protein of unknown function (DUF3048) C-terminal domain KNH48_13180 PF13382 Adenine deaminase C-terminal domain KNH48_13180 PF01979 Amidohydrolase family KNH48_13200 PF00551 Formyl transferase KNH48_13205 PF00586 AIR synthase related protein, N-terminal domain KNH48_13205 PF02769 AIR synthase related protein, C-terminal domain KNH48_13210 PF00156 Phosphoribosyl transferase domain KNH48_13215 PF00586 AIR synthase related protein, N-terminal domain KNH48_13215 PF02769 AIR synthase related protein, C-terminal domain KNH48_13215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KNH48_13225 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KNH48_13235 PF10397 Adenylosuccinate lyase C-terminus KNH48_13235 PF00206 Lyase KNH48_13240 PF02222 ATP-grasp domain KNH48_13240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KNH48_13245 PF00731 AIR carboxylase KNH48_13260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KNH48_13265 PF01323 DSBA-like thioredoxin domain KNH48_13270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_13270 PF00367 phosphotransferase system, EIIB KNH48_13270 PF02378 Phosphotransferase system, EIIC KNH48_13295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KNH48_13295 PF00367 phosphotransferase system, EIIB KNH48_13295 PF02378 Phosphotransferase system, EIIC KNH48_13300 PF00874 PRD domain KNH48_13300 PF03123 CAT RNA binding domain KNH48_13305 PF00860 Permease family KNH48_13330 PF07690 Major Facilitator Superfamily KNH48_13335 PF00072 Response regulator receiver domain KNH48_13335 PF00196 Bacterial regulatory proteins, luxR family KNH48_13340 PF07730 Histidine kinase KNH48_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_13340 PF13492 GAF domain KNH48_13345 PF00005 ABC transporter KNH48_13365 PF00939 Sodium:sulfate symporter transmembrane region KNH48_13370 PF04231 Endonuclease I KNH48_13390 PF00005 ABC transporter KNH48_13395 PF00392 Bacterial regulatory proteins, gntR family KNH48_13400 PF03551 Transcriptional regulator PadR-like family KNH48_13400 PF10400 Virulence activator alpha C-term KNH48_13405 PF05870 Phenolic acid decarboxylase (PAD) KNH48_13410 PF13460 NAD(P)H-binding KNH48_13415 PF02082 Transcriptional regulator KNH48_13435 PF00005 ABC transporter KNH48_13455 PF00027 Cyclic nucleotide-binding domain KNH48_13455 PF00325 Bacterial regulatory proteins, crp family KNH48_13460 PF01206 Sulfurtransferase TusA KNH48_13475 PF01810 LysE type translocator KNH48_13500 PF01206 Sulfurtransferase TusA KNH48_13505 PF04143 Sulphur transport KNH48_13525 PF17340 Family of unknown function (DUF5370) KNH48_13530 PF00664 ABC transporter transmembrane region KNH48_13530 PF00005 ABC transporter KNH48_13540 PF12399 Branched-chain amino acid ATP-binding cassette transporter KNH48_13540 PF00005 ABC transporter KNH48_13575 PF00005 ABC transporter KNH48_13590 PF07690 Major Facilitator Superfamily KNH48_13595 PF01381 Helix-turn-helix KNH48_13610 PF17863 AAA lid domain KNH48_13610 PF07726 ATPase family associated with various cellular activities (AAA) KNH48_13615 PF02540 NAD synthase KNH48_13620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KNH48_13620 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KNH48_13620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KNH48_13625 PF00857 Isochorismatase family KNH48_13630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KNH48_13630 PF13378 Enolase C-terminal domain-like KNH48_13640 PF00535 Glycosyl transferase family 2 KNH48_13645 PF04138 GtrA-like protein KNH48_13650 PF00118 TCP-1/cpn60 chaperonin family KNH48_13655 PF00166 Chaperonin 10 Kd subunit KNH48_13665 PF02517 CPBP intramembrane metalloprotease KNH48_13675 PF00902 Sec-independent protein translocase protein (TatC) KNH48_13680 PF02629 CoA binding domain KNH48_13680 PF06971 Putative DNA-binding protein N-terminus KNH48_13685 PF16326 ABC transporter C-terminal domain KNH48_13685 PF12848 ABC transporter KNH48_13685 PF00005 ABC transporter KNH48_13690 PF00814 Glycoprotease family KNH48_13695 PF00583 Acetyltransferase (GNAT) family KNH48_13700 PF00814 Glycoprotease family KNH48_13705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KNH48_13800 PF17674 HHH domain KNH48_13800 PF00575 S1 RNA binding domain KNH48_13800 PF09371 Tex-like protein N-terminal domain KNH48_13800 PF16921 Tex protein YqgF-like domain KNH48_13805 PF07228 Stage II sporulation protein E (SpoIIE) KNH48_13810 PF04542 Sigma-70 region 2 KNH48_13810 PF04545 Sigma-70, region 4 KNH48_13810 PF04539 Sigma-70 region 3 KNH48_13815 PF13581 Histidine kinase-like ATPase domain KNH48_13820 PF01740 STAS domain KNH48_13825 PF07228 Stage II sporulation protein E (SpoIIE) KNH48_13825 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KNH48_13830 PF13581 Histidine kinase-like ATPase domain KNH48_13835 PF01740 STAS domain KNH48_13840 PF01740 STAS domain KNH48_13840 PF08678 Rsbr N terminal KNH48_13845 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KNH48_13850 PF01402 Ribbon-helix-helix protein, copG family KNH48_13855 PF01168 Alanine racemase, N-terminal domain KNH48_13855 PF00842 Alanine racemase, C-terminal domain KNH48_13865 PF01648 4'-phosphopantetheinyl transferase superfamily KNH48_13870 PF01694 Rhomboid family KNH48_13875 PF00270 DEAD/DEAH box helicase KNH48_13875 PF00271 Helicase conserved C-terminal domain KNH48_13885 PF01810 LysE type translocator KNH48_13895 PF13419 Haloacid dehalogenase-like hydrolase KNH48_13900 PF00356 Bacterial regulatory proteins, lacI family KNH48_13905 PF00128 Alpha amylase, catalytic domain KNH48_13910 PF02903 Alpha amylase, N-terminal ig-like domain KNH48_13910 PF00128 Alpha amylase, catalytic domain KNH48_13915 PF13416 Bacterial extracellular solute-binding protein KNH48_13920 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_13925 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_13930 PF06691 Protein of unknown function (DUF1189) KNH48_13935 PF03633 Glycosyl hydrolase family 65, C-terminal domain KNH48_13935 PF03636 Glycosyl hydrolase family 65, N-terminal domain KNH48_13935 PF03632 Glycosyl hydrolase family 65 central catalytic domain KNH48_13940 PF16657 Maltogenic Amylase, C-terminal domain KNH48_13940 PF00128 Alpha amylase, catalytic domain KNH48_13950 PF07478 D-ala D-ala ligase C-terminus KNH48_13950 PF01820 D-ala D-ala ligase N-terminus KNH48_13960 PF00571 CBS domain KNH48_13960 PF03471 Transporter associated domain KNH48_13960 PF01595 Cyclin M transmembrane N-terminal domain KNH48_13965 PF13411 MerR HTH family regulatory protein KNH48_13990 PF00271 Helicase conserved C-terminal domain KNH48_13990 PF00176 SNF2 family N-terminal domain KNH48_13990 PF12419 SNF2 Helicase protein KNH48_14000 PF14183 YwpF-like protein KNH48_14005 PF00436 Single-strand binding protein family KNH48_14015 PF07977 FabA-like domain KNH48_14020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KNH48_14020 PF00460 Flagella basal body rod protein KNH48_14035 PF12116 Stage III sporulation protein D KNH48_14040 PF01551 Peptidase family M23 KNH48_14045 PF08486 Stage II sporulation protein KNH48_14050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KNH48_14060 PF06612 Protein of unknown function (DUF1146) KNH48_14065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KNH48_14065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KNH48_14070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KNH48_14070 PF02874 ATP synthase alpha/beta family, beta-barrel domain KNH48_14075 PF00231 ATP synthase KNH48_14080 PF02874 ATP synthase alpha/beta family, beta-barrel domain KNH48_14080 PF00306 ATP synthase alpha/beta chain, C terminal domain KNH48_14080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KNH48_14085 PF00213 ATP synthase delta (OSCP) subunit KNH48_14090 PF00430 ATP synthase B/B' CF(0) KNH48_14095 PF00137 ATP synthase subunit C KNH48_14100 PF00119 ATP synthase A chain KNH48_14105 PF03899 ATP synthase I chain KNH48_14115 PF00464 Serine hydroxymethyltransferase KNH48_14120 PF04260 Protein of unknown function (DUF436) KNH48_14125 PF02502 Ribose/Galactose Isomerase KNH48_14130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KNH48_14130 PF00672 HAMP domain KNH48_14130 PF02743 Cache domain KNH48_14175 PF02659 Putative manganese efflux pump KNH48_14180 PF01300 Telomere recombination KNH48_14180 PF03481 Putative GTP-binding controlling metal-binding KNH48_14185 PF09551 Stage II sporulation protein R (spore_II_R) KNH48_14190 PF13847 Methyltransferase domain KNH48_14190 PF17827 PrmC N-terminal domain KNH48_14195 PF00472 RF-1 domain KNH48_14195 PF03462 PCRF domain KNH48_14205 PF00265 Thymidine kinase KNH48_14210 PF01197 Ribosomal protein L31 KNH48_14215 PF07497 Rho termination factor, RNA-binding domain KNH48_14215 PF07498 Rho termination factor, N-terminal domain KNH48_14215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KNH48_14220 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KNH48_14225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KNH48_14230 PF00923 Transaldolase/Fructose-6-phosphate aldolase KNH48_14235 PF01116 Fructose-bisphosphate aldolase class-II KNH48_14255 PF00005 ABC transporter KNH48_14265 PF06418 CTP synthase N-terminus KNH48_14265 PF00117 Glutamine amidotransferase class-I KNH48_14270 PF05066 HB1, ASXL, restriction endonuclease HTH domain KNH48_14290 PF00005 ABC transporter KNH48_14325 PF08359 YsiA-like protein, C-terminal region KNH48_14325 PF00440 Bacterial regulatory proteins, tetR family KNH48_14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KNH48_14330 PF02770 Acyl-CoA dehydrogenase, middle domain KNH48_14330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KNH48_14335 PF02770 Acyl-CoA dehydrogenase, middle domain KNH48_14335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KNH48_14335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KNH48_14340 PF02803 Thiolase, C-terminal domain KNH48_14340 PF00108 Thiolase, N-terminal domain KNH48_14345 PF02754 Cysteine-rich domain KNH48_14345 PF13183 4Fe-4S dicluster domain KNH48_14350 PF13091 PLD-like domain KNH48_14365 PF00491 Arginase family KNH48_14370 PF00912 Transglycosylase KNH48_14370 PF00905 Penicillin binding protein transpeptidase domain KNH48_14375 PF08741 YwhD family KNH48_14380 PF02163 Peptidase family M50 KNH48_14385 PF01361 Tautomerase enzyme KNH48_14405 PF03099 Biotin/lipoate A/B protein ligase family KNH48_14415 PF01515 Phosphate acetyl/butaryl transferase KNH48_14420 PF06778 Chlorite dismutase KNH48_14430 PF04241 Protein of unknown function (DUF423) KNH48_14435 PF17261 Family of unknown function (DUF5327) KNH48_14440 PF03167 Uracil DNA glycosylase superfamily KNH48_14445 PF11181 Heat induced stress protein YflT KNH48_14475 PF00005 ABC transporter KNH48_14495 PF08543 Phosphomethylpyrimidine kinase KNH48_14510 PF02585 GlcNAc-PI de-N-acetylase KNH48_14520 PF00270 DEAD/DEAH box helicase KNH48_14520 PF00271 Helicase conserved C-terminal domain KNH48_14520 PF00570 HRDC domain KNH48_14520 PF16124 RecQ zinc-binding KNH48_14520 PF09382 RQC domain KNH48_14525 PF00245 Alkaline phosphatase KNH48_14530 PF01418 Helix-turn-helix domain, rpiR family KNH48_14530 PF01380 SIS domain KNH48_14545 PF04073 Aminoacyl-tRNA editing domain KNH48_14555 PF04172 LrgB-like family KNH48_14560 PF03788 LrgA family KNH48_14565 PF03466 LysR substrate binding domain KNH48_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KNH48_14680 PF06738 Putative threonine/serine exporter KNH48_14685 PF01063 Amino-transferase class IV KNH48_14690 PF02554 Carbon starvation protein CstA KNH48_14690 PF13722 5TM C-terminal transporter carbon starvation CstA KNH48_14695 PF03180 NLPA lipoprotein KNH48_14700 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_14705 PF00005 ABC transporter KNH48_14705 PF09383 NIL domain KNH48_14710 PF00005 ABC transporter KNH48_14725 PF01554 MatE KNH48_14730 PF01501 Glycosyl transferase family 8 KNH48_14730 PF08437 Glycosyl transferase family 8 C-terminal KNH48_14735 PF01546 Peptidase family M20/M25/M40 KNH48_14735 PF07687 Peptidase dimerisation domain KNH48_14750 PF00082 Subtilase family KNH48_14765 PF00082 Subtilase family KNH48_14780 PF00860 Permease family KNH48_14785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KNH48_14785 PF00205 Thiamine pyrophosphate enzyme, central domain KNH48_14785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KNH48_14805 PF00664 ABC transporter transmembrane region KNH48_14805 PF00005 ABC transporter KNH48_14815 PF14489 QueF-like protein KNH48_14820 PF03176 MMPL family KNH48_14825 PF00128 Alpha amylase, catalytic domain KNH48_14825 PF09154 Domain of unknown function (DUF1939) KNH48_14835 PF01740 STAS domain KNH48_14840 PF00497 Bacterial extracellular solute-binding proteins, family 3 KNH48_14845 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_14850 PF00005 ABC transporter KNH48_14870 PF00497 Bacterial extracellular solute-binding proteins, family 3 KNH48_14875 PF00005 ABC transporter KNH48_14885 PF00528 Binding-protein-dependent transport system inner membrane component KNH48_14890 PF06039 Malate:quinone oxidoreductase (Mqo) KNH48_14895 PF00083 Sugar (and other) transporter KNH48_14905 PF02590 Predicted SPOUT methyltransferase KNH48_14910 PF13180 PDZ domain KNH48_14915 PF00753 Metallo-beta-lactamase superfamily KNH48_14920 PF09648 YycH protein KNH48_14925 PF07435 YycH protein KNH48_14930 PF00672 HAMP domain KNH48_14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KNH48_14930 PF00512 His Kinase A (phospho-acceptor) domain KNH48_14930 PF13426 PAS domain KNH48_14935 PF00072 Response regulator receiver domain KNH48_14935 PF00486 Transcriptional regulatory protein, C terminal KNH48_14950 PF00709 Adenylosuccinate synthetase KNH48_14955 PF00772 DnaB-like helicase N terminal domain KNH48_14955 PF03796 DnaB-like helicase C terminal domain KNH48_14960 PF01281 Ribosomal protein L9, N-terminal domain KNH48_14960 PF03948 Ribosomal protein L9, C-terminal domain KNH48_14965 PF01368 DHH family KNH48_14965 PF02272 DHHA1 domain KNH48_14975 PF01084 Ribosomal protein S18 KNH48_14980 PF00436 Single-strand binding protein family KNH48_14985 PF01250 Ribosomal protein S6 KNH48_14990 PF00885 6,7-dimethyl-8-ribityllumazine synthase KNH48_14995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KNH48_14995 PF00925 GTP cyclohydrolase II KNH48_15000 PF00677 Lumazine binding domain KNH48_15005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KNH48_15005 PF01872 RibD C-terminal domain KNH48_15010 PF01926 50S ribosome-binding GTPase KNH48_15010 PF06071 Protein of unknown function (DUF933) KNH48_15015 PF06107 Bacterial protein of unknown function (DUF951) KNH48_15020 PF00924 Mechanosensitive ion channel KNH48_15025 PF06866 Protein of unknown function (DUF1256) KNH48_15030 PF04474 Protein of unknown function (DUF554) KNH48_15035 PF17762 HTH domain found in ParB protein KNH48_15035 PF02195 ParB-like nuclease domain KNH48_15045 PF17762 HTH domain found in ParB protein KNH48_15045 PF02195 ParB-like nuclease domain KNH48_15050 PF02527 rRNA small subunit methyltransferase G KNH48_15055 PF01134 Glucose inhibited division protein A KNH48_15055 PF13932 GidA associated domain KNH48_15060 PF01926 50S ribosome-binding GTPase KNH48_15060 PF12631 MnmE helical domain KNH48_15060 PF10396 GTP-binding protein TrmE N-terminus KNH48_15065 PF14804 Jag N-terminus KNH48_15065 PF01424 R3H domain KNH48_15070 PF02096 60Kd inner membrane protein KNH48_15075 PF00825 Ribonuclease P KNH48_15080 PF00468 Ribosomal protein L34