locus-tag class description SB48_HM08orf00002 PF11638 DnaA N-terminal domain SB48_HM08orf00002 PF00308 Bacterial dnaA protein SB48_HM08orf00002 PF08299 Bacterial dnaA protein helix-turn-helix SB48_HM08orf00004 PF00468 Ribosomal protein L34 SB48_HM08orf00005 PF00825 Ribonuclease P SB48_HM08orf00006 PF02096 60Kd inner membrane protein SB48_HM08orf00007 PF14804 Jag N-terminus SB48_HM08orf00007 PF01424 R3H domain SB48_HM08orf00010 PF01926 50S ribosome-binding GTPase SB48_HM08orf00010 PF12631 MnmE helical domain SB48_HM08orf00010 PF10396 GTP-binding protein TrmE N-terminus SB48_HM08orf00012 PF13932 GidA associated domain SB48_HM08orf00012 PF01134 Glucose inhibited division protein A SB48_HM08orf00014 PF02527 rRNA small subunit methyltransferase G SB48_HM08orf00016 PF17762 HTH domain found in ParB protein SB48_HM08orf00016 PF02195 ParB-like nuclease domain SB48_HM08orf00019 PF13614 AAA domain SB48_HM08orf00020 PF02195 ParB-like nuclease domain SB48_HM08orf00020 PF17762 HTH domain found in ParB protein SB48_HM08orf00025 PF06866 Protein of unknown function (DUF1256) SB48_HM08orf00028 PF00924 Mechanosensitive ion channel SB48_HM08orf00029 PF06107 Bacterial protein of unknown function (DUF951) SB48_HM08orf00030 PF06071 Protein of unknown function (DUF933) SB48_HM08orf00030 PF01926 50S ribosome-binding GTPase SB48_HM08orf00031 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SB48_HM08orf00031 PF01872 RibD C-terminal domain SB48_HM08orf00032 PF00677 Lumazine binding domain SB48_HM08orf00034 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SB48_HM08orf00034 PF00925 GTP cyclohydrolase II SB48_HM08orf00035 PF00885 6,7-dimethyl-8-ribityllumazine synthase SB48_HM08orf00037 PF01250 Ribosomal protein S6 SB48_HM08orf00038 PF00436 Single-strand binding protein family SB48_HM08orf00039 PF01084 Ribosomal protein S18 SB48_HM08orf00042 PF01368 DHH family SB48_HM08orf00042 PF02272 DHHA1 domain SB48_HM08orf00043 PF03948 Ribosomal protein L9, C-terminal domain SB48_HM08orf00043 PF01281 Ribosomal protein L9, N-terminal domain SB48_HM08orf00047 PF03796 DnaB-like helicase C terminal domain SB48_HM08orf00047 PF00772 DnaB-like helicase N terminal domain SB48_HM08orf00050 PF00709 Adenylosuccinate synthetase SB48_HM08orf00053 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf00053 PF00072 Response regulator receiver domain SB48_HM08orf00054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf00054 PF00672 HAMP domain SB48_HM08orf00054 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf00054 PF13426 PAS domain SB48_HM08orf00055 PF07435 YycH protein SB48_HM08orf00056 PF09648 YycH protein SB48_HM08orf00057 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf00059 PF13180 PDZ domain SB48_HM08orf00062 PF02590 Predicted SPOUT methyltransferase SB48_HM08orf00067 PF01695 IstB-like ATP binding protein SB48_HM08orf00068 PF00155 Aminotransferase class I and II SB48_HM08orf00068 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf00073 PF01810 LysE type translocator SB48_HM08orf00085 PF00872 Transposase, Mutator family SB48_HM08orf00087 PF03992 Antibiotic biosynthesis monooxygenase SB48_HM08orf00095 PF02384 N-6 DNA Methylase SB48_HM08orf00096 PF01420 Type I restriction modification DNA specificity domain SB48_HM08orf00097 PF18766 SWI2/SNF2 ATPase SB48_HM08orf00097 PF11867 Domain of unknown function (DUF3387) SB48_HM08orf00097 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SB48_HM08orf00098 PF06039 Malate:quinone oxidoreductase (Mqo) SB48_HM08orf00102 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00104 PF00005 ABC transporter SB48_HM08orf00106 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf00109 PF01168 Alanine racemase, N-terminal domain SB48_HM08orf00113 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SB48_HM08orf00115 PF03435 Saccharopine dehydrogenase NADP binding domain SB48_HM08orf00115 PF16653 Saccharopine dehydrogenase C-terminal domain SB48_HM08orf00118 PF00005 ABC transporter SB48_HM08orf00120 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00122 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf00123 PF01740 STAS domain SB48_HM08orf00124 PF09363 XFP C-terminal domain SB48_HM08orf00124 PF09364 XFP N-terminal domain SB48_HM08orf00124 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SB48_HM08orf00125 PF07702 UTRA domain SB48_HM08orf00125 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf00129 PF00128 Alpha amylase, catalytic domain SB48_HM08orf00129 PF09154 Domain of unknown function (DUF1939) SB48_HM08orf00134 PF03176 MMPL family SB48_HM08orf00136 PF14489 QueF-like protein SB48_HM08orf00140 PF00005 ABC transporter SB48_HM08orf00140 PF00664 ABC transporter transmembrane region SB48_HM08orf00142 PF01791 DeoC/LacD family aldolase SB48_HM08orf00145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SB48_HM08orf00145 PF00205 Thiamine pyrophosphate enzyme, central domain SB48_HM08orf00145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SB48_HM08orf00147 PF00860 Permease family SB48_HM08orf00150 PF07690 Major Facilitator Superfamily SB48_HM08orf00156 PF07687 Peptidase dimerisation domain SB48_HM08orf00156 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf00157 PF08437 Glycosyl transferase family 8 C-terminal SB48_HM08orf00157 PF01501 Glycosyl transferase family 8 SB48_HM08orf00160 PF01554 MatE SB48_HM08orf00165 PF00005 ABC transporter SB48_HM08orf00168 PF09383 NIL domain SB48_HM08orf00168 PF00005 ABC transporter SB48_HM08orf00170 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00171 PF03180 NLPA lipoprotein SB48_HM08orf00172 PF07694 5TMR of 5TMR-LYT SB48_HM08orf00172 PF13492 GAF domain SB48_HM08orf00172 PF06580 Histidine kinase SB48_HM08orf00172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf00173 PF04397 LytTr DNA-binding domain SB48_HM08orf00173 PF00072 Response regulator receiver domain SB48_HM08orf00174 PF02554 Carbon starvation protein CstA SB48_HM08orf00174 PF13722 5TM C-terminal transporter carbon starvation CstA SB48_HM08orf00177 PF01063 Amino-transferase class IV SB48_HM08orf00179 PF06738 Putative threonine/serine exporter SB48_HM08orf00183 PF01609 Transposase DDE domain SB48_HM08orf00190 PF13537 Glutamine amidotransferase domain SB48_HM08orf00190 PF00733 Asparagine synthase SB48_HM08orf00192 PF03466 LysR substrate binding domain SB48_HM08orf00192 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf00193 PF03788 LrgA family SB48_HM08orf00194 PF04172 LrgB-like family SB48_HM08orf00198 PF04073 Aminoacyl-tRNA editing domain SB48_HM08orf00203 PF01380 SIS domain SB48_HM08orf00203 PF01418 Helix-turn-helix domain, rpiR family SB48_HM08orf00205 PF00245 Alkaline phosphatase SB48_HM08orf00207 PF09382 RQC domain SB48_HM08orf00207 PF16124 RecQ zinc-binding SB48_HM08orf00207 PF00570 HRDC domain SB48_HM08orf00207 PF00271 Helicase conserved C-terminal domain SB48_HM08orf00207 PF00270 DEAD/DEAH box helicase SB48_HM08orf00209 PF02585 GlcNAc-PI de-N-acetylase SB48_HM08orf00214 PF08543 Phosphomethylpyrimidine kinase SB48_HM08orf00216 PF00005 ABC transporter SB48_HM08orf00222 PF00005 ABC transporter SB48_HM08orf00225 PF11181 Heat induced stress protein YflT SB48_HM08orf00226 PF03167 Uracil DNA glycosylase superfamily SB48_HM08orf00230 PF17261 Family of unknown function (DUF5327) SB48_HM08orf00231 PF04241 Protein of unknown function (DUF423) SB48_HM08orf00233 PF09671 Spore coat protein (Spore_GerQ) SB48_HM08orf00234 PF06778 Chlorite dismutase SB48_HM08orf00237 PF01515 Phosphate acetyl/butaryl transferase SB48_HM08orf00239 PF03099 Biotin/lipoate A/B protein ligase family SB48_HM08orf00247 PF01966 HD domain SB48_HM08orf00249 PF01361 Tautomerase enzyme SB48_HM08orf00251 PF02163 Peptidase family M50 SB48_HM08orf00253 PF08741 YwhD family SB48_HM08orf00256 PF00912 Transglycosylase SB48_HM08orf00256 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf00258 PF00491 Arginase family SB48_HM08orf00261 PF03485 Arginyl tRNA synthetase N terminal domain SB48_HM08orf00261 PF05746 DALR anticodon binding domain SB48_HM08orf00261 PF00750 tRNA synthetases class I (R) SB48_HM08orf00262 PF13091 PLD-like domain SB48_HM08orf00266 PF13183 4Fe-4S dicluster domain SB48_HM08orf00266 PF02754 Cysteine-rich domain SB48_HM08orf00270 PF00108 Thiolase, N-terminal domain SB48_HM08orf00270 PF02803 Thiolase, C-terminal domain SB48_HM08orf00273 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf00273 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf00273 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf00274 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf00274 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf00274 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf00276 PF08359 YsiA-like protein, C-terminal region SB48_HM08orf00276 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf00279 PF01642 Methylmalonyl-CoA mutase SB48_HM08orf00279 PF02310 B12 binding domain SB48_HM08orf00283 PF00005 ABC transporter SB48_HM08orf00287 PF05066 HB1, ASXL, restriction endonuclease HTH domain SB48_HM08orf00288 PF06418 CTP synthase N-terminus SB48_HM08orf00288 PF00117 Glutamine amidotransferase class-I SB48_HM08orf00291 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf00293 PF00005 ABC transporter SB48_HM08orf00296 PF00072 Response regulator receiver domain SB48_HM08orf00298 PF01116 Fructose-bisphosphate aldolase class-II SB48_HM08orf00301 PF00923 Transaldolase/Fructose-6-phosphate aldolase SB48_HM08orf00305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SB48_HM08orf00306 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SB48_HM08orf00310 PF07498 Rho termination factor, N-terminal domain SB48_HM08orf00310 PF07497 Rho termination factor, RNA-binding domain SB48_HM08orf00310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SB48_HM08orf00313 PF00265 Thymidine kinase SB48_HM08orf00315 PF00472 RF-1 domain SB48_HM08orf00315 PF03462 PCRF domain SB48_HM08orf00316 PF13847 Methyltransferase domain SB48_HM08orf00316 PF17827 PrmC N-terminal domain SB48_HM08orf00320 PF09551 Stage II sporulation protein R (spore_II_R) SB48_HM08orf00323 PF03481 Putative GTP-binding controlling metal-binding SB48_HM08orf00323 PF01300 Telomere recombination SB48_HM08orf00326 PF02659 Putative manganese efflux pump SB48_HM08orf00328 PF01451 Low molecular weight phosphotyrosine protein phosphatase SB48_HM08orf00329 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf00332 PF02502 Ribose/Galactose Isomerase SB48_HM08orf00335 PF04260 Protein of unknown function (DUF436) SB48_HM08orf00337 PF00464 Serine hydroxymethyltransferase SB48_HM08orf00342 PF03899 ATP synthase I chain SB48_HM08orf00343 PF00119 ATP synthase A chain SB48_HM08orf00344 PF00137 ATP synthase subunit C SB48_HM08orf00345 PF00430 ATP synthase B/B' CF(0) SB48_HM08orf00346 PF00213 ATP synthase delta (OSCP) subunit SB48_HM08orf00347 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SB48_HM08orf00347 PF00306 ATP synthase alpha/beta chain, C terminal domain SB48_HM08orf00347 PF02874 ATP synthase alpha/beta family, beta-barrel domain SB48_HM08orf00348 PF00231 ATP synthase SB48_HM08orf00350 PF02874 ATP synthase alpha/beta family, beta-barrel domain SB48_HM08orf00350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SB48_HM08orf00352 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SB48_HM08orf00352 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SB48_HM08orf00354 PF06612 Protein of unknown function (DUF1146) SB48_HM08orf00358 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SB48_HM08orf00360 PF08486 Stage II sporulation protein SB48_HM08orf00362 PF01551 Peptidase family M23 SB48_HM08orf00364 PF12116 Stage III sporulation protein D SB48_HM08orf00369 PF00460 Flagella basal body rod protein SB48_HM08orf00369 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SB48_HM08orf00370 PF00460 Flagella basal body rod protein SB48_HM08orf00370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SB48_HM08orf00373 PF07977 FabA-like domain SB48_HM08orf00378 PF00436 Single-strand binding protein family SB48_HM08orf00379 PF14183 YwpF-like protein SB48_HM08orf00381 PF00271 Helicase conserved C-terminal domain SB48_HM08orf00381 PF00176 SNF2 family N-terminal domain SB48_HM08orf00381 PF12419 SNF2 Helicase protein SB48_HM08orf00390 PF00571 CBS domain SB48_HM08orf00390 PF03471 Transporter associated domain SB48_HM08orf00390 PF01595 Cyclin M transmembrane N-terminal domain SB48_HM08orf00391 PF13411 MerR HTH family regulatory protein SB48_HM08orf00393 PF01595 Cyclin M transmembrane N-terminal domain SB48_HM08orf00393 PF03471 Transporter associated domain SB48_HM08orf00393 PF00571 CBS domain SB48_HM08orf00398 PF01820 D-ala D-ala ligase N-terminus SB48_HM08orf00398 PF07478 D-ala D-ala ligase C-terminus SB48_HM08orf00399 PF08245 Mur ligase middle domain SB48_HM08orf00399 PF02875 Mur ligase family, glutamate ligase domain SB48_HM08orf00399 PF01225 Mur ligase family, catalytic domain SB48_HM08orf00403 PF00128 Alpha amylase, catalytic domain SB48_HM08orf00403 PF16657 Maltogenic Amylase, C-terminal domain SB48_HM08orf00404 PF03633 Glycosyl hydrolase family 65, C-terminal domain SB48_HM08orf00404 PF03632 Glycosyl hydrolase family 65 central catalytic domain SB48_HM08orf00404 PF03636 Glycosyl hydrolase family 65, N-terminal domain SB48_HM08orf00407 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00408 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00412 PF13416 Bacterial extracellular solute-binding protein SB48_HM08orf00413 PF00128 Alpha amylase, catalytic domain SB48_HM08orf00413 PF02903 Alpha amylase, N-terminal ig-like domain SB48_HM08orf00414 PF00128 Alpha amylase, catalytic domain SB48_HM08orf00417 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf00418 PF13419 Haloacid dehalogenase-like hydrolase SB48_HM08orf00421 PF01810 LysE type translocator SB48_HM08orf00426 PF00271 Helicase conserved C-terminal domain SB48_HM08orf00426 PF00270 DEAD/DEAH box helicase SB48_HM08orf00429 PF01694 Rhomboid family SB48_HM08orf00430 PF01648 4'-phosphopantetheinyl transferase superfamily SB48_HM08orf00434 PF01168 Alanine racemase, N-terminal domain SB48_HM08orf00434 PF00842 Alanine racemase, C-terminal domain SB48_HM08orf00436 PF01402 Ribbon-helix-helix protein, copG family SB48_HM08orf00437 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SB48_HM08orf00443 PF01740 STAS domain SB48_HM08orf00443 PF08678 Rsbr N terminal SB48_HM08orf00444 PF01740 STAS domain SB48_HM08orf00445 PF13581 Histidine kinase-like ATPase domain SB48_HM08orf00448 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SB48_HM08orf00448 PF07228 Stage II sporulation protein E (SpoIIE) SB48_HM08orf00449 PF01740 STAS domain SB48_HM08orf00451 PF13581 Histidine kinase-like ATPase domain SB48_HM08orf00452 PF04542 Sigma-70 region 2 SB48_HM08orf00452 PF04539 Sigma-70 region 3 SB48_HM08orf00452 PF04545 Sigma-70, region 4 SB48_HM08orf00453 PF07228 Stage II sporulation protein E (SpoIIE) SB48_HM08orf00457 PF16921 Tex protein YqgF-like domain SB48_HM08orf00457 PF00575 S1 RNA binding domain SB48_HM08orf00457 PF17674 HHH domain SB48_HM08orf00457 PF09371 Tex-like protein N-terminal domain SB48_HM08orf00460 PF17283 SprT-like zinc ribbon domain SB48_HM08orf00460 PF10263 SprT-like family SB48_HM08orf00465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SB48_HM08orf00466 PF00814 Glycoprotease family SB48_HM08orf00468 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf00470 PF00814 Glycoprotease family SB48_HM08orf00474 PF12848 ABC transporter SB48_HM08orf00474 PF00005 ABC transporter SB48_HM08orf00474 PF16326 ABC transporter C-terminal domain SB48_HM08orf00476 PF06971 Putative DNA-binding protein N-terminus SB48_HM08orf00476 PF02629 CoA binding domain SB48_HM08orf00480 PF00902 Sec-independent protein translocase protein (TatC) SB48_HM08orf00484 PF02517 CPBP intramembrane metalloprotease SB48_HM08orf00488 PF00166 Chaperonin 10 Kd subunit SB48_HM08orf00490 PF00118 TCP-1/cpn60 chaperonin family SB48_HM08orf00492 PF04138 GtrA-like protein SB48_HM08orf00493 PF00535 Glycosyl transferase family 2 SB48_HM08orf00498 PF13378 Enolase C-terminal domain-like SB48_HM08orf00498 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SB48_HM08orf00500 PF00857 Isochorismatase family SB48_HM08orf00501 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SB48_HM08orf00501 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SB48_HM08orf00501 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SB48_HM08orf00503 PF02540 NAD synthase SB48_HM08orf00506 PF00958 GMP synthase C terminal domain SB48_HM08orf00506 PF00117 Glutamine amidotransferase class-I SB48_HM08orf00506 PF02540 NAD synthase SB48_HM08orf00509 PF01381 Helix-turn-helix SB48_HM08orf00510 PF07690 Major Facilitator Superfamily SB48_HM08orf00512 PF01032 FecCD transport family SB48_HM08orf00513 PF00005 ABC transporter SB48_HM08orf00515 PF17340 Family of unknown function (DUF5370) SB48_HM08orf00523 PF04143 Sulphur transport SB48_HM08orf00524 PF01206 Sulfurtransferase TusA SB48_HM08orf00532 PF02082 Transcriptional regulator SB48_HM08orf00533 PF13460 NAD(P)H-binding SB48_HM08orf00536 PF05870 Phenolic acid decarboxylase (PAD) SB48_HM08orf00537 PF10400 Virulence activator alpha C-term SB48_HM08orf00537 PF03551 Transcriptional regulator PadR-like family SB48_HM08orf00539 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf00540 PF00005 ABC transporter SB48_HM08orf00548 PF00939 Sodium:sulfate symporter transmembrane region SB48_HM08orf00551 PF07883 Cupin domain SB48_HM08orf00552 PF01557 Fumarylacetoacetate (FAA) hydrolase family SB48_HM08orf00553 PF09339 IclR helix-turn-helix domain SB48_HM08orf00553 PF01614 Bacterial transcriptional regulator SB48_HM08orf00558 PF07690 Major Facilitator Superfamily SB48_HM08orf00559 PF17853 GGDEF-like domain SB48_HM08orf00559 PF07905 Purine catabolism regulatory protein-like family SB48_HM08orf00559 PF13556 PucR C-terminal helix-turn-helix domain SB48_HM08orf00561 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf00561 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SB48_HM08orf00566 PF00108 Thiolase, N-terminal domain SB48_HM08orf00566 PF02803 Thiolase, C-terminal domain SB48_HM08orf00569 PF00501 AMP-binding enzyme SB48_HM08orf00569 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf00570 PF03061 Thioesterase superfamily SB48_HM08orf00572 PF01494 FAD binding domain SB48_HM08orf00576 PF01557 Fumarylacetoacetate (FAA) hydrolase family SB48_HM08orf00578 PF07883 Cupin domain SB48_HM08orf00583 PF00005 ABC transporter SB48_HM08orf00585 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SB48_HM08orf00585 PF00672 HAMP domain SB48_HM08orf00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf00585 PF07730 Histidine kinase SB48_HM08orf00586 PF00196 Bacterial regulatory proteins, luxR family SB48_HM08orf00586 PF00072 Response regulator receiver domain SB48_HM08orf00589 PF07690 Major Facilitator Superfamily SB48_HM08orf00591 PF00664 ABC transporter transmembrane region SB48_HM08orf00591 PF00005 ABC transporter SB48_HM08orf00595 PF00860 Permease family SB48_HM08orf00598 PF03123 CAT RNA binding domain SB48_HM08orf00598 PF00874 PRD domain SB48_HM08orf00604 PF02378 Phosphotransferase system, EIIC SB48_HM08orf00604 PF00367 phosphotransferase system, EIIB SB48_HM08orf00604 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf00606 PF00375 Sodium:dicarboxylate symporter family SB48_HM08orf00614 PF11975 Family 4 glycosyl hydrolase C-terminal domain SB48_HM08orf00614 PF02056 Family 4 glycosyl hydrolase SB48_HM08orf00616 PF02378 Phosphotransferase system, EIIC SB48_HM08orf00616 PF00367 phosphotransferase system, EIIB SB48_HM08orf00620 PF02378 Phosphotransferase system, EIIC SB48_HM08orf00620 PF00367 phosphotransferase system, EIIB SB48_HM08orf00620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf00624 PF01323 DSBA-like thioredoxin domain SB48_HM08orf00626 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SB48_HM08orf00630 PF00731 AIR carboxylase SB48_HM08orf00633 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SB48_HM08orf00633 PF02222 ATP-grasp domain SB48_HM08orf00634 PF10397 Adenylosuccinate lyase C-terminus SB48_HM08orf00634 PF00206 Lyase SB48_HM08orf00635 PF01259 SAICAR synthetase SB48_HM08orf00636 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SB48_HM08orf00639 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SB48_HM08orf00639 PF00586 AIR synthase related protein, N-terminal domain SB48_HM08orf00639 PF02769 AIR synthase related protein, C-terminal domain SB48_HM08orf00640 PF00156 Phosphoribosyl transferase domain SB48_HM08orf00641 PF02769 AIR synthase related protein, C-terminal domain SB48_HM08orf00641 PF00586 AIR synthase related protein, N-terminal domain SB48_HM08orf00644 PF00551 Formyl transferase SB48_HM08orf00645 PF02142 MGS-like domain SB48_HM08orf00645 PF01808 AICARFT/IMPCHase bienzyme SB48_HM08orf00647 PF02843 Phosphoribosylglycinamide synthetase, C domain SB48_HM08orf00647 PF02844 Phosphoribosylglycinamide synthetase, N domain SB48_HM08orf00647 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SB48_HM08orf00651 PF13382 Adenine deaminase C-terminal domain SB48_HM08orf00651 PF01979 Amidohydrolase family SB48_HM08orf00652 PF17479 Protein of unknown function (DUF3048) C-terminal domain SB48_HM08orf00652 PF11258 Protein of unknown function (DUF3048) N-terminal domain SB48_HM08orf00654 PF01371 Trp repressor protein SB48_HM08orf00657 PF01884 PcrB family SB48_HM08orf00659 PF13361 UvrD-like helicase C-terminal domain SB48_HM08orf00659 PF00580 UvrD/REP helicase N-terminal domain SB48_HM08orf00660 PF00580 UvrD/REP helicase N-terminal domain SB48_HM08orf00660 PF13361 UvrD-like helicase C-terminal domain SB48_HM08orf00662 PF12826 Helix-hairpin-helix motif SB48_HM08orf00662 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SB48_HM08orf00662 PF01653 NAD-dependent DNA ligase adenylation domain SB48_HM08orf00662 PF00533 BRCA1 C Terminus (BRCT) domain SB48_HM08orf00662 PF03120 NAD-dependent DNA ligase OB-fold domain SB48_HM08orf00664 PF07537 CamS sex pheromone cAM373 precursor SB48_HM08orf00666 PF01274 Malate synthase SB48_HM08orf00668 PF00463 Isocitrate lyase family SB48_HM08orf00670 PF02686 Glu-tRNAGln amidotransferase C subunit SB48_HM08orf00671 PF01425 Amidase SB48_HM08orf00673 PF02637 GatB domain SB48_HM08orf00673 PF02934 GatB/GatE catalytic domain SB48_HM08orf00684 PF00781 Diacylglycerol kinase catalytic domain SB48_HM08orf00690 PF00474 Sodium:solute symporter family SB48_HM08orf00691 PF05958 tRNA (Uracil-5-)-methyltransferase SB48_HM08orf00691 PF02475 Met-10+ like-protein SB48_HM08orf00691 PF01938 TRAM domain SB48_HM08orf00706 PF03830 PTS system sorbose subfamily IIB component SB48_HM08orf00712 PF03613 PTS system mannose/fructose/sorbose family IID component SB48_HM08orf00723 PF00106 short chain dehydrogenase SB48_HM08orf00724 PF07690 Major Facilitator Superfamily SB48_HM08orf00735 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf00735 PF00107 Zinc-binding dehydrogenase SB48_HM08orf00739 PF01266 FAD dependent oxidoreductase SB48_HM08orf00761 PF00183 Hsp90 protein SB48_HM08orf00768 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf00769 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00770 PF00005 ABC transporter SB48_HM08orf00774 PF02566 OsmC-like protein SB48_HM08orf00777 PF07690 Major Facilitator Superfamily SB48_HM08orf00779 PF02682 Carboxyltransferase domain, subdomain C and D SB48_HM08orf00782 PF02626 Carboxyltransferase domain, subdomain A and B SB48_HM08orf00783 PF03746 LamB/YcsF family SB48_HM08orf00788 PF01470 Pyroglutamyl peptidase SB48_HM08orf00791 PF00860 Permease family SB48_HM08orf00792 PF01773 Na+ dependent nucleoside transporter N-terminus SB48_HM08orf00792 PF07662 Na+ dependent nucleoside transporter C-terminus SB48_HM08orf00796 PF01048 Phosphorylase superfamily SB48_HM08orf00798 PF04198 Putative sugar-binding domain SB48_HM08orf00802 PF01676 Metalloenzyme superfamily SB48_HM08orf00805 PF02885 Glycosyl transferase family, helical bundle domain SB48_HM08orf00805 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SB48_HM08orf00805 PF00591 Glycosyl transferase family, a/b domain SB48_HM08orf00806 PF01791 DeoC/LacD family aldolase SB48_HM08orf00808 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SB48_HM08orf00811 PF01717 Cobalamin-independent synthase, Catalytic domain SB48_HM08orf00811 PF08267 Cobalamin-independent synthase, N-terminal domain SB48_HM08orf00813 PF00872 Transposase, Mutator family SB48_HM08orf00819 PF00478 IMP dehydrogenase / GMP reductase domain SB48_HM08orf00822 PF09084 NMT1/THI5 like SB48_HM08orf00823 PF00296 Luciferase-like monooxygenase SB48_HM08orf00824 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00825 PF00005 ABC transporter SB48_HM08orf00826 PF03358 NADPH-dependent FMN reductase SB48_HM08orf00828 PF10055 Uncharacterized small protein (DUF2292) SB48_HM08orf00830 PF00795 Carbon-nitrogen hydrolase SB48_HM08orf00830 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf00846 PF00171 Aldehyde dehydrogenase family SB48_HM08orf00847 PF00083 Sugar (and other) transporter SB48_HM08orf00849 PF01425 Amidase SB48_HM08orf00850 PF00135 Carboxylesterase family SB48_HM08orf00859 PF01476 LysM domain SB48_HM08orf00859 PF00877 NlpC/P60 family SB48_HM08orf00863 PF00664 ABC transporter transmembrane region SB48_HM08orf00863 PF00005 ABC transporter SB48_HM08orf00866 PF00005 ABC transporter SB48_HM08orf00866 PF00664 ABC transporter transmembrane region SB48_HM08orf00869 PF01348 Type II intron maturase SB48_HM08orf00869 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf00870 PF07075 Protein of unknown function (DUF1343) SB48_HM08orf00874 PF00144 Beta-lactamase SB48_HM08orf00875 PF00933 Glycosyl hydrolase family 3 N terminal domain SB48_HM08orf00875 PF01915 Glycosyl hydrolase family 3 C-terminal domain SB48_HM08orf00880 PF00892 EamA-like transporter family SB48_HM08orf00891 PF00313 'Cold-shock' DNA-binding domain SB48_HM08orf00893 PF02801 Beta-ketoacyl synthase, C-terminal domain SB48_HM08orf00893 PF00109 Beta-ketoacyl synthase, N-terminal domain SB48_HM08orf00894 PF13188 PAS domain SB48_HM08orf00894 PF00989 PAS fold SB48_HM08orf00894 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf00894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf00894 PF13426 PAS domain SB48_HM08orf00907 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf00908 PF00834 Ribulose-phosphate 3 epimerase family SB48_HM08orf00910 PF00294 pfkB family carbohydrate kinase SB48_HM08orf00910 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SB48_HM08orf00912 PF05425 Copper resistance protein D SB48_HM08orf00912 PF04234 CopC domain SB48_HM08orf00912 PF13115 YtkA-like SB48_HM08orf00913 PF07987 Domain of unkown function (DUF1775) SB48_HM08orf00927 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf00928 PF00294 pfkB family carbohydrate kinase SB48_HM08orf00929 PF05025 RbsD / FucU transport protein family SB48_HM08orf00931 PF00005 ABC transporter SB48_HM08orf00932 PF02653 Branched-chain amino acid transport system / permease component SB48_HM08orf00934 PF13407 Periplasmic binding protein domain SB48_HM08orf00936 PF02447 GntP family permease SB48_HM08orf00937 PF02595 Glycerate kinase family SB48_HM08orf00940 PF05651 Putative sugar diacid recognition SB48_HM08orf00940 PF17853 GGDEF-like domain SB48_HM08orf00940 PF13556 PucR C-terminal helix-turn-helix domain SB48_HM08orf00943 PF00107 Zinc-binding dehydrogenase SB48_HM08orf00943 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf00948 PF03477 ATP cone domain SB48_HM08orf00948 PF13597 Anaerobic ribonucleoside-triphosphate reductase SB48_HM08orf00955 PF00375 Sodium:dicarboxylate symporter family SB48_HM08orf00959 PF00872 Transposase, Mutator family SB48_HM08orf00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf00960 PF03466 LysR substrate binding domain SB48_HM08orf00961 PF00390 Malic enzyme, N-terminal domain SB48_HM08orf00961 PF03949 Malic enzyme, NAD binding domain SB48_HM08orf00969 PF01380 SIS domain SB48_HM08orf00969 PF00571 CBS domain SB48_HM08orf00970 PF00367 phosphotransferase system, EIIB SB48_HM08orf00970 PF02378 Phosphotransferase system, EIIC SB48_HM08orf00972 PF11975 Family 4 glycosyl hydrolase C-terminal domain SB48_HM08orf00972 PF02056 Family 4 glycosyl hydrolase SB48_HM08orf00973 PF01609 Transposase DDE domain SB48_HM08orf00975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf00977 PF00255 Glutathione peroxidase SB48_HM08orf00980 PF01810 LysE type translocator SB48_HM08orf00985 PF00296 Luciferase-like monooxygenase SB48_HM08orf00986 PF00462 Glutaredoxin SB48_HM08orf00987 PF00296 Luciferase-like monooxygenase SB48_HM08orf00988 PF00005 ABC transporter SB48_HM08orf00990 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00991 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf00992 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf00995 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf00996 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf00998 PF03358 NADPH-dependent FMN reductase SB48_HM08orf00999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf00999 PF03466 LysR substrate binding domain SB48_HM08orf01002 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf01013 PF04634 Protein of unknown function, DUF600 SB48_HM08orf01017 PF04634 Protein of unknown function, DUF600 SB48_HM08orf01019 PF02384 N-6 DNA Methylase SB48_HM08orf01019 PF12161 HsdM N-terminal domain SB48_HM08orf01021 PF18766 SWI2/SNF2 ATPase SB48_HM08orf01021 PF12008 Type I restriction and modification enzyme - subunit R C terminal SB48_HM08orf01021 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SB48_HM08orf01024 PF12102 Domain of unknown function (DUF3578) SB48_HM08orf01024 PF07728 AAA domain (dynein-related subfamily) SB48_HM08orf01026 PF10117 McrBC 5-methylcytosine restriction system component SB48_HM08orf01030 PF00274 Fructose-bisphosphate aldolase class-I SB48_HM08orf01032 PF07690 Major Facilitator Superfamily SB48_HM08orf01034 PF02665 Nitrate reductase gamma subunit SB48_HM08orf01037 PF14711 Respiratory nitrate reductase beta C-terminal SB48_HM08orf01037 PF13247 4Fe-4S dicluster domain SB48_HM08orf01040 PF01568 Molydopterin dinucleotide binding domain SB48_HM08orf01040 PF00384 Molybdopterin oxidoreductase SB48_HM08orf01040 PF14710 Respiratory nitrate reductase alpha N-terminal SB48_HM08orf01046 PF00005 ABC transporter SB48_HM08orf01050 PF00324 Amino acid permease SB48_HM08orf01057 PF13426 PAS domain SB48_HM08orf01057 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf01057 PF00158 Sigma-54 interaction domain SB48_HM08orf01060 PF00202 Aminotransferase class-III SB48_HM08orf01062 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SB48_HM08orf01064 PF00923 Transaldolase/Fructose-6-phosphate aldolase SB48_HM08orf01065 PF02502 Ribose/Galactose Isomerase SB48_HM08orf01067 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf01067 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SB48_HM08orf01071 PF07690 Major Facilitator Superfamily SB48_HM08orf01072 PF02734 DAK2 domain SB48_HM08orf01074 PF00701 Dihydrodipicolinate synthetase family SB48_HM08orf01076 PF02733 Dak1 domain SB48_HM08orf01077 PF00121 Triosephosphate isomerase SB48_HM08orf01078 PF08220 DeoR-like helix-turn-helix domain SB48_HM08orf01078 PF00455 DeoR C terminal sensor domain SB48_HM08orf01079 PF00158 Sigma-54 interaction domain SB48_HM08orf01079 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf01079 PF13426 PAS domain SB48_HM08orf01082 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf01082 PF00501 AMP-binding enzyme SB48_HM08orf01088 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf01088 PF16177 Acetyl-coenzyme A synthetase N-terminus SB48_HM08orf01088 PF00501 AMP-binding enzyme SB48_HM08orf01091 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf01091 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf01091 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf01097 PF02785 Biotin carboxylase C-terminal domain SB48_HM08orf01097 PF00289 Biotin carboxylase, N-terminal domain SB48_HM08orf01097 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SB48_HM08orf01098 PF00364 Biotin-requiring enzyme SB48_HM08orf01099 PF00682 HMGL-like SB48_HM08orf01101 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf01102 PF01039 Carboxyl transferase domain SB48_HM08orf01108 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf01113 PF00253 Ribosomal protein S14p/S29e SB48_HM08orf01117 PF00580 UvrD/REP helicase N-terminal domain SB48_HM08orf01117 PF13361 UvrD-like helicase C-terminal domain SB48_HM08orf01122 PF00860 Permease family SB48_HM08orf01124 PF01925 Sulfite exporter TauE/SafE SB48_HM08orf01127 PF00324 Amino acid permease SB48_HM08orf01129 PF00881 Nitroreductase family SB48_HM08orf01137 PF02733 Dak1 domain SB48_HM08orf01139 PF02734 DAK2 domain SB48_HM08orf01140 PF03610 PTS system fructose IIA component SB48_HM08orf01147 PF00202 Aminotransferase class-III SB48_HM08orf01152 PF04607 Region found in RelA / SpoT proteins SB48_HM08orf01154 PF17370 Family of unknown function (DUF5392) SB48_HM08orf01159 PF04055 Radical SAM superfamily SB48_HM08orf01162 PF00083 Sugar (and other) transporter SB48_HM08orf01165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf01175 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf01176 PF08220 DeoR-like helix-turn-helix domain SB48_HM08orf01176 PF00455 DeoR C terminal sensor domain SB48_HM08orf01181 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf01181 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf01183 PF00999 Sodium/hydrogen exchanger family SB48_HM08orf01186 PF12728 Helix-turn-helix domain SB48_HM08orf01187 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SB48_HM08orf01188 PF01070 FMN-dependent dehydrogenase SB48_HM08orf01195 PF00881 Nitroreductase family SB48_HM08orf01197 PF00271 Helicase conserved C-terminal domain SB48_HM08orf01197 PF04434 SWIM zinc finger SB48_HM08orf01197 PF00176 SNF2 family N-terminal domain SB48_HM08orf01201 PF09704 CRISPR-associated protein (Cas_Cas5) SB48_HM08orf01206 PF01867 CRISPR associated protein Cas1 SB48_HM08orf01207 PF09827 CRISPR associated protein Cas2 SB48_HM08orf01209 PF01381 Helix-turn-helix SB48_HM08orf01211 PF00300 Histidine phosphatase superfamily (branch 1) SB48_HM08orf01214 PF00375 Sodium:dicarboxylate symporter family SB48_HM08orf01215 PF00149 Calcineurin-like phosphoesterase SB48_HM08orf01215 PF02872 5'-nucleotidase, C-terminal domain SB48_HM08orf01216 PF06207 Protein of unknown function (DUF1002) SB48_HM08orf01225 PF00196 Bacterial regulatory proteins, luxR family SB48_HM08orf01225 PF00072 Response regulator receiver domain SB48_HM08orf01231 PF05036 Sporulation related domain SB48_HM08orf01231 PF01520 N-acetylmuramoyl-L-alanine amidase SB48_HM08orf01233 PF00484 Carbonic anhydrase SB48_HM08orf01234 PF08241 Methyltransferase domain SB48_HM08orf01237 PF02664 S-Ribosylhomocysteinase (LuxS) SB48_HM08orf01239 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf01240 PF01053 Cys/Met metabolism PLP-dependent enzyme SB48_HM08orf01246 PF15975 Flotillin SB48_HM08orf01246 PF01145 SPFH domain / Band 7 family SB48_HM08orf01253 PF03061 Thioesterase superfamily SB48_HM08orf01254 PF01258 Prokaryotic dksA/traR C4-type zinc finger SB48_HM08orf01256 PF07690 Major Facilitator Superfamily SB48_HM08orf01257 PF04343 Protein of unknown function, DUF488 SB48_HM08orf01259 PF09350 Domain of unknown function (DUF1992) SB48_HM08orf01262 PF01618 MotA/TolQ/ExbB proton channel family SB48_HM08orf01263 PF13677 Membrane MotB of proton-channel complex MotA/MotB SB48_HM08orf01263 PF00691 OmpA family SB48_HM08orf01264 PF01965 DJ-1/PfpI family SB48_HM08orf01266 PF00557 Metallopeptidase family M24 SB48_HM08orf01268 PF06569 Protein of unknown function (DUF1128) SB48_HM08orf01269 PF03631 Virulence factor BrkB SB48_HM08orf01270 PF07690 Major Facilitator Superfamily SB48_HM08orf01271 PF01699 Sodium/calcium exchanger protein SB48_HM08orf01274 PF14167 YfkD-like protein SB48_HM08orf01279 PF01522 Polysaccharide deacetylase SB48_HM08orf01282 PF00730 HhH-GPD superfamily base excision DNA repair protein SB48_HM08orf01283 PF05958 tRNA (Uracil-5-)-methyltransferase SB48_HM08orf01283 PF01938 TRAM domain SB48_HM08orf01286 PF01047 MarR family SB48_HM08orf01288 PF00005 ABC transporter SB48_HM08orf01288 PF00664 ABC transporter transmembrane region SB48_HM08orf01290 PF12002 MgsA AAA+ ATPase C terminal SB48_HM08orf01290 PF16193 AAA C-terminal domain SB48_HM08orf01290 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf01297 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SB48_HM08orf01297 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SB48_HM08orf01298 PF00672 HAMP domain SB48_HM08orf01298 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf01298 PF12729 Four helix bundle sensory module for signal transduction SB48_HM08orf01301 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SB48_HM08orf01301 PF06827 Zinc finger found in FPG and IleRS SB48_HM08orf01301 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SB48_HM08orf01303 PF00579 tRNA synthetases class I (W and Y) SB48_HM08orf01303 PF01479 S4 domain SB48_HM08orf01304 PF01207 Dihydrouridine synthase (Dus) SB48_HM08orf01312 PF08946 Osmosensory transporter coiled coil SB48_HM08orf01312 PF00083 Sugar (and other) transporter SB48_HM08orf01315 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) SB48_HM08orf01321 PF04306 Protein of unknown function (DUF456) SB48_HM08orf01323 PF00375 Sodium:dicarboxylate symporter family SB48_HM08orf01325 PF11188 Protein of unknown function (DUF2975) SB48_HM08orf01326 PF13443 Cro/C1-type HTH DNA-binding domain SB48_HM08orf01328 PF05675 Protein of unknown function (DUF817) SB48_HM08orf01330 PF05227 CHASE3 domain SB48_HM08orf01330 PF00672 HAMP domain SB48_HM08orf01330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf01349 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf01349 PF17932 Tetracyclin repressor-like, C-terminal domain SB48_HM08orf01352 PF00394 Multicopper oxidase SB48_HM08orf01352 PF07732 Multicopper oxidase SB48_HM08orf01352 PF07731 Multicopper oxidase SB48_HM08orf01354 PF17763 Glutaminase/Asparaginase C-terminal domain SB48_HM08orf01354 PF00710 Asparaginase, N-terminal SB48_HM08orf01358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf01358 PF06580 Histidine kinase SB48_HM08orf01358 PF07694 5TMR of 5TMR-LYT SB48_HM08orf01359 PF00072 Response regulator receiver domain SB48_HM08orf01359 PF04397 LytTr DNA-binding domain SB48_HM08orf01362 PF07690 Major Facilitator Superfamily SB48_HM08orf01364 PF01717 Cobalamin-independent synthase, Catalytic domain SB48_HM08orf01366 PF01027 Inhibitor of apoptosis-promoting Bax1 SB48_HM08orf01368 PF00067 Cytochrome P450 SB48_HM08orf01373 PF01740 STAS domain SB48_HM08orf01374 PF05525 Branched-chain amino acid transport protein SB48_HM08orf01378 PF00920 Dehydratase family SB48_HM08orf01382 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SB48_HM08orf01382 PF00205 Thiamine pyrophosphate enzyme, central domain SB48_HM08orf01382 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SB48_HM08orf01383 PF10369 Small subunit of acetolactate synthase SB48_HM08orf01383 PF01842 ACT domain SB48_HM08orf01386 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SB48_HM08orf01386 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SB48_HM08orf01388 PF08502 LeuA allosteric (dimerisation) domain SB48_HM08orf01388 PF00682 HMGL-like SB48_HM08orf01389 PF00180 Isocitrate/isopropylmalate dehydrogenase SB48_HM08orf01390 PF00330 Aconitase family (aconitate hydratase) SB48_HM08orf01393 PF00694 Aconitase C-terminal domain SB48_HM08orf01394 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf01394 PF13291 ACT domain SB48_HM08orf01396 PF13419 Haloacid dehalogenase-like hydrolase SB48_HM08orf01401 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SB48_HM08orf01401 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SB48_HM08orf01401 PF01842 ACT domain SB48_HM08orf01403 PF00266 Aminotransferase class-V SB48_HM08orf01404 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SB48_HM08orf01404 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SB48_HM08orf01406 PF02743 Cache domain SB48_HM08orf01406 PF00672 HAMP domain SB48_HM08orf01406 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf01411 PF00343 Carbohydrate phosphorylase SB48_HM08orf01415 PF00171 Aldehyde dehydrogenase family SB48_HM08orf01415 PF00171 Aldehyde dehydrogenase family SB48_HM08orf01421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf01421 PF07730 Histidine kinase SB48_HM08orf01422 PF00196 Bacterial regulatory proteins, luxR family SB48_HM08orf01422 PF00072 Response regulator receiver domain SB48_HM08orf01425 PF00027 Cyclic nucleotide-binding domain SB48_HM08orf01425 PF00005 ABC transporter SB48_HM08orf01429 PF09221 Bacteriocin class IId cyclical uberolysin-like SB48_HM08orf01431 PF00005 ABC transporter SB48_HM08orf01435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SB48_HM08orf01436 PF12704 MacB-like periplasmic core domain SB48_HM08orf01436 PF00005 ABC transporter SB48_HM08orf01436 PF02687 FtsX-like permease family SB48_HM08orf01437 PF02687 FtsX-like permease family SB48_HM08orf01437 PF12704 MacB-like periplasmic core domain SB48_HM08orf01443 PF00425 chorismate binding enzyme SB48_HM08orf01443 PF04715 Anthranilate synthase component I, N terminal region SB48_HM08orf01444 PF00591 Glycosyl transferase family, a/b domain SB48_HM08orf01444 PF00117 Glutamine amidotransferase class-I SB48_HM08orf01444 PF02885 Glycosyl transferase family, helical bundle domain SB48_HM08orf01445 PF00591 Glycosyl transferase family, a/b domain SB48_HM08orf01445 PF02885 Glycosyl transferase family, helical bundle domain SB48_HM08orf01446 PF00218 Indole-3-glycerol phosphate synthase SB48_HM08orf01447 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf01449 PF00290 Tryptophan synthase alpha chain SB48_HM08orf01451 PF14151 YfhD-like protein SB48_HM08orf01454 PF02631 RecX family SB48_HM08orf01457 PF08838 Protein of unknown function (DUF1811) SB48_HM08orf01466 PF00730 HhH-GPD superfamily base excision DNA repair protein SB48_HM08orf01466 PF14815 NUDIX domain SB48_HM08orf01468 PF04307 LexA-binding, inner membrane-associated putative hydrolase SB48_HM08orf01470 PF08176 Small acid-soluble spore protein K family SB48_HM08orf01471 PF00005 ABC transporter SB48_HM08orf01472 PF01609 Transposase DDE domain SB48_HM08orf01477 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SB48_HM08orf01477 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf01482 PF01645 Conserved region in glutamate synthase SB48_HM08orf01482 PF01493 GXGXG motif SB48_HM08orf01482 PF00310 Glutamine amidotransferases class-II SB48_HM08orf01482 PF04898 Glutamate synthase central domain SB48_HM08orf01483 PF03466 LysR substrate binding domain SB48_HM08orf01483 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf01487 PF14182 YgaB-like protein SB48_HM08orf01488 PF04167 Protein of unknown function (DUF402) SB48_HM08orf01489 PF00005 ABC transporter SB48_HM08orf01489 PF00664 ABC transporter transmembrane region SB48_HM08orf01492 PF13580 SIS domain SB48_HM08orf01493 PF00367 phosphotransferase system, EIIB SB48_HM08orf01493 PF02378 Phosphotransferase system, EIIC SB48_HM08orf01494 PF01380 SIS domain SB48_HM08orf01494 PF01418 Helix-turn-helix domain, rpiR family SB48_HM08orf01496 PF06081 Aromatic acid exporter family member 1 SB48_HM08orf01498 PF10942 Protein of unknown function (DUF2619) SB48_HM08orf01502 PF07690 Major Facilitator Superfamily SB48_HM08orf01504 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SB48_HM08orf01505 PF00005 ABC transporter SB48_HM08orf01506 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf01507 PF09084 NMT1/THI5 like SB48_HM08orf01510 PF00202 Aminotransferase class-III SB48_HM08orf01512 PF07885 Ion channel SB48_HM08orf01513 PF01923 Cobalamin adenosyltransferase SB48_HM08orf01516 PF01475 Ferric uptake regulator family SB48_HM08orf01521 PF03466 LysR substrate binding domain SB48_HM08orf01521 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf01523 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SB48_HM08orf01523 PF00205 Thiamine pyrophosphate enzyme, central domain SB48_HM08orf01523 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SB48_HM08orf01524 PF03306 Alpha-acetolactate decarboxylase SB48_HM08orf01525 PF11023 Zinc-ribbon containing domain SB48_HM08orf01527 PF18576 Helix-turn-helix domain SB48_HM08orf01527 PF14540 Nucleotidyltransferase-like SB48_HM08orf01533 PF04239 Protein of unknown function (DUF421) SB48_HM08orf01536 PF00296 Luciferase-like monooxygenase SB48_HM08orf01539 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf01539 PF00107 Zinc-binding dehydrogenase SB48_HM08orf01544 PF00892 EamA-like transporter family SB48_HM08orf01550 PF07690 Major Facilitator Superfamily SB48_HM08orf01552 PF05977 Transmembrane secretion effector SB48_HM08orf01562 PF01047 MarR family SB48_HM08orf01563 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SB48_HM08orf01563 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SB48_HM08orf01567 PF00005 ABC transporter SB48_HM08orf01568 PF01266 FAD dependent oxidoreductase SB48_HM08orf01569 PF00854 POT family SB48_HM08orf01570 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf01570 PF07702 UTRA domain SB48_HM08orf01579 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf01579 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf01579 PF00672 HAMP domain SB48_HM08orf01580 PF00072 Response regulator receiver domain SB48_HM08orf01580 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf01584 PF01609 Transposase DDE domain SB48_HM08orf01590 PF00005 ABC transporter SB48_HM08orf01597 PF03358 NADPH-dependent FMN reductase SB48_HM08orf01599 PF04055 Radical SAM superfamily SB48_HM08orf01600 PF01228 Glycine radical SB48_HM08orf01600 PF02901 Pyruvate formate lyase-like SB48_HM08orf01602 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf01610 PF10920 Protein of unknown function (DUF2705) SB48_HM08orf01612 PF01226 Formate/nitrite transporter SB48_HM08orf01614 PF00005 ABC transporter SB48_HM08orf01615 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf01617 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf01618 PF00561 alpha/beta hydrolase fold SB48_HM08orf01619 PF02915 Rubrerythrin SB48_HM08orf01621 PF02833 DHHA2 domain SB48_HM08orf01621 PF01368 DHH family SB48_HM08orf01626 PF01914 MarC family integral membrane protein SB48_HM08orf01629 PF08331 Domain of unknown function (DUF1730) SB48_HM08orf01631 PF12671 Putative amidase domain SB48_HM08orf01632 PF00588 SpoU rRNA Methylase family SB48_HM08orf01638 PF06798 PrkA serine protein kinase C-terminal domain SB48_HM08orf01638 PF08298 PrkA AAA domain SB48_HM08orf01640 PF04285 Protein of unknown function (DUF444) SB48_HM08orf01645 PF01384 Phosphate transporter family SB48_HM08orf01647 PF01865 Protein of unknown function DUF47 SB48_HM08orf01652 PF02600 Disulfide bond formation protein DsbB SB48_HM08orf01655 PF01757 Acyltransferase family SB48_HM08orf01657 PF04293 SpoVR like protein SB48_HM08orf01663 PF14148 YhdB-like protein SB48_HM08orf01666 PF01544 CorA-like Mg2+ transporter protein SB48_HM08orf01668 PF07722 Peptidase C26 SB48_HM08orf01670 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf01671 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf01671 PF12911 N-terminal TM domain of oligopeptide transport permease C SB48_HM08orf01673 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf01673 PF00005 ABC transporter SB48_HM08orf01676 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SB48_HM08orf01678 PF00877 NlpC/P60 family SB48_HM08orf01681 PF00005 ABC transporter SB48_HM08orf01681 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf01685 PF00912 Transglycosylase SB48_HM08orf01685 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf01692 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf01698 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SB48_HM08orf01698 PF01568 Molydopterin dinucleotide binding domain SB48_HM08orf01698 PF00384 Molybdopterin oxidoreductase SB48_HM08orf01698 PF12838 4Fe-4S dicluster domain SB48_HM08orf01698 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SB48_HM08orf01706 PF04963 Sigma-54 factor, core binding domain SB48_HM08orf01706 PF00309 Sigma-54 factor, Activator interacting domain (AID) SB48_HM08orf01706 PF04552 Sigma-54, DNA binding domain SB48_HM08orf01710 PF04198 Putative sugar-binding domain SB48_HM08orf01711 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SB48_HM08orf01711 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SB48_HM08orf01714 PF00162 Phosphoglycerate kinase SB48_HM08orf01715 PF00121 Triosephosphate isomerase SB48_HM08orf01716 PF01676 Metalloenzyme superfamily SB48_HM08orf01716 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SB48_HM08orf01719 PF00113 Enolase, C-terminal TIM barrel domain SB48_HM08orf01719 PF03952 Enolase, N-terminal domain SB48_HM08orf01724 PF03840 Preprotein translocase SecG subunit SB48_HM08orf01727 PF12146 Serine aminopeptidase, S33 SB48_HM08orf01728 PF08206 Ribonuclease B OB domain SB48_HM08orf01728 PF00773 RNB domain SB48_HM08orf01728 PF00575 S1 RNA binding domain SB48_HM08orf01728 PF17876 Cold shock domain SB48_HM08orf01732 PF01668 SmpB protein SB48_HM08orf01735 PF00535 Glycosyl transferase family 2 SB48_HM08orf01743 PF09286 Pro-kumamolisin, activation domain SB48_HM08orf01743 PF00082 Subtilase family SB48_HM08orf01751 PF01614 Bacterial transcriptional regulator SB48_HM08orf01751 PF09339 IclR helix-turn-helix domain SB48_HM08orf01754 PF01081 KDPG and KHG aldolase SB48_HM08orf01757 PF08125 Mannitol dehydrogenase C-terminal domain SB48_HM08orf01757 PF01232 Mannitol dehydrogenase Rossmann domain SB48_HM08orf01758 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SB48_HM08orf01758 PF08666 SAF domain SB48_HM08orf01759 PF02614 Glucuronate isomerase SB48_HM08orf01764 PF04962 KduI/IolB family SB48_HM08orf01765 PF00294 pfkB family carbohydrate kinase SB48_HM08orf01766 PF06968 Biotin and Thiamin Synthesis associated domain SB48_HM08orf01766 PF04055 Radical SAM superfamily SB48_HM08orf01779 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SB48_HM08orf01784 PF08281 Sigma-70, region 4 SB48_HM08orf01784 PF04542 Sigma-70 region 2 SB48_HM08orf01792 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SB48_HM08orf01792 PF04101 Glycosyltransferase family 28 C-terminal domain SB48_HM08orf01794 PF01522 Polysaccharide deacetylase SB48_HM08orf01796 PF01569 PAP2 superfamily SB48_HM08orf01798 PF00199 Catalase SB48_HM08orf01798 PF06628 Catalase-related immune-responsive SB48_HM08orf01800 PF00563 EAL domain SB48_HM08orf01800 PF00990 Diguanylate cyclase, GGDEF domain SB48_HM08orf01800 PF13426 PAS domain SB48_HM08orf01804 PF00873 AcrB/AcrD/AcrF family SB48_HM08orf01810 PF00085 Thioredoxin SB48_HM08orf01811 PF01098 Cell cycle protein SB48_HM08orf01813 PF07875 Coat F domain SB48_HM08orf01818 PF14115 YuzL-like protein SB48_HM08orf01820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SB48_HM08orf01820 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf01820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf01822 PF02803 Thiolase, C-terminal domain SB48_HM08orf01822 PF00108 Thiolase, N-terminal domain SB48_HM08orf01826 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf01826 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf01826 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf01828 PF03960 ArsC family SB48_HM08orf01829 PF01597 Glycine cleavage H-protein SB48_HM08orf01830 PF00085 Thioredoxin SB48_HM08orf01838 PF00005 ABC transporter SB48_HM08orf01839 PF01458 Uncharacterized protein family (UPF0051) SB48_HM08orf01841 PF00266 Aminotransferase class-V SB48_HM08orf01842 PF01592 NifU-like N terminal domain SB48_HM08orf01844 PF01458 Uncharacterized protein family (UPF0051) SB48_HM08orf01847 PF02872 5'-nucleotidase, C-terminal domain SB48_HM08orf01848 PF08827 Domain of unknown function (DUF1805) SB48_HM08orf01850 PF09560 Sporulation protein YunB (Spo_YunB) SB48_HM08orf01852 PF01551 Peptidase family M23 SB48_HM08orf01855 PF04055 Radical SAM superfamily SB48_HM08orf01855 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SB48_HM08orf01857 PF06265 Protein of unknown function (DUF1027) SB48_HM08orf01858 PF01934 Protein of unknown function DUF86 SB48_HM08orf01860 PF13344 Haloacid dehalogenase-like hydrolase SB48_HM08orf01862 PF04608 Phosphatidylglycerophosphatase A SB48_HM08orf01867 PF01106 NifU-like domain SB48_HM08orf01869 PF07315 Protein of unknown function (DUF1462) SB48_HM08orf01872 PF01521 Iron-sulphur cluster biosynthesis SB48_HM08orf01884 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf01887 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf01888 PF14068 Putative membrane protein SB48_HM08orf01893 PF06725 3D domain SB48_HM08orf01899 PF02789 Cytosol aminopeptidase family, N-terminal domain SB48_HM08orf01899 PF00883 Cytosol aminopeptidase family, catalytic domain SB48_HM08orf01901 PF03323 Bacillus/Clostridium GerA spore germination protein SB48_HM08orf01902 PF05504 Spore germination B3/ GerAC like, C-terminal SB48_HM08orf01903 PF03845 Spore germination protein SB48_HM08orf01912 PF03061 Thioesterase superfamily SB48_HM08orf01914 PF07690 Major Facilitator Superfamily SB48_HM08orf01920 PF01609 Transposase DDE domain SB48_HM08orf01923 PF08810 Kinase associated protein B SB48_HM08orf01926 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SB48_HM08orf01935 PF00248 Aldo/keto reductase family SB48_HM08orf01937 PF00248 Aldo/keto reductase family SB48_HM08orf01939 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SB48_HM08orf01943 PF00575 S1 RNA binding domain SB48_HM08orf01952 PF04070 Domain of unknown function (DUF378) SB48_HM08orf01953 PF00342 Phosphoglucose isomerase SB48_HM08orf01955 PF07885 Ion channel SB48_HM08orf01955 PF02254 TrkA-N domain SB48_HM08orf01959 PF02423 Ornithine cyclodeaminase/mu-crystallin family SB48_HM08orf01963 PF00171 Aldehyde dehydrogenase family SB48_HM08orf01965 PF01571 Aminomethyltransferase folate-binding domain SB48_HM08orf01965 PF01266 FAD dependent oxidoreductase SB48_HM08orf01965 PF16350 FAD dependent oxidoreductase central domain SB48_HM08orf01965 PF08669 Glycine cleavage T-protein C-terminal barrel domain SB48_HM08orf01972 PF02681 Divergent PAP2 family SB48_HM08orf01985 PF00672 HAMP domain SB48_HM08orf01985 PF02743 Cache domain SB48_HM08orf01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf01986 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf01992 PF02653 Branched-chain amino acid transport system / permease component SB48_HM08orf01993 PF00005 ABC transporter SB48_HM08orf01994 PF13407 Periplasmic binding protein domain SB48_HM08orf01995 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf01997 PF11762 L-arabinose isomerase C-terminal domain SB48_HM08orf01997 PF02610 L-arabinose isomerase SB48_HM08orf01998 PF00596 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf02003 PF00083 Sugar (and other) transporter SB48_HM08orf02008 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf02011 PF00565 Staphylococcal nuclease homologue SB48_HM08orf02011 PF05901 Excalibur calcium-binding domain SB48_HM08orf02013 PF02583 Metal-sensitive transcriptional repressor SB48_HM08orf02014 PF00581 Rhodanese-like domain SB48_HM08orf02016 PF01609 Transposase DDE domain SB48_HM08orf02018 PF00654 Voltage gated chloride channel SB48_HM08orf02020 PF00872 Transposase, Mutator family SB48_HM08orf02030 PF01522 Polysaccharide deacetylase SB48_HM08orf02035 PF03860 Domain of Unknown Function (DUF326) SB48_HM08orf02042 PF00474 Sodium:solute symporter family SB48_HM08orf02043 PF11755 Protein of unknown function (DUF3311) SB48_HM08orf02044 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf02044 PF07687 Peptidase dimerisation domain SB48_HM08orf02048 PF01037 Lrp/AsnC ligand binding domain SB48_HM08orf02052 PF00403 Heavy-metal-associated domain SB48_HM08orf02055 PF00403 Heavy-metal-associated domain SB48_HM08orf02066 PF02308 MgtC family SB48_HM08orf02072 PF01040 UbiA prenyltransferase family SB48_HM08orf02074 PF00425 chorismate binding enzyme SB48_HM08orf02076 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SB48_HM08orf02076 PF16582 Middle domain of thiamine pyrophosphate SB48_HM08orf02076 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SB48_HM08orf02078 PF00561 alpha/beta hydrolase fold SB48_HM08orf02079 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf02083 PF00501 AMP-binding enzyme SB48_HM08orf02083 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf02084 PF13378 Enolase C-terminal domain-like SB48_HM08orf02084 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SB48_HM08orf02087 PF07561 Domain of Unknown Function (DUF1540) SB48_HM08orf02088 PF01297 Zinc-uptake complex component A periplasmic SB48_HM08orf02093 PF01809 Putative membrane protein insertion efficiency factor SB48_HM08orf02095 PF00210 Ferritin-like domain SB48_HM08orf02101 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf02102 PF00005 ABC transporter SB48_HM08orf02106 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf02106 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf02110 PF03358 NADPH-dependent FMN reductase SB48_HM08orf02111 PF00326 Prolyl oligopeptidase family SB48_HM08orf02115 PF01293 Phosphoenolpyruvate carboxykinase SB48_HM08orf02118 PF02773 S-adenosylmethionine synthetase, C-terminal domain SB48_HM08orf02118 PF02772 S-adenosylmethionine synthetase, central domain SB48_HM08orf02118 PF00438 S-adenosylmethionine synthetase, N-terminal domain SB48_HM08orf02122 PF00733 Asparagine synthase SB48_HM08orf02122 PF13537 Glutamine amidotransferase domain SB48_HM08orf02128 PF00132 Bacterial transferase hexapeptide (six repeats) SB48_HM08orf02130 PF12146 Serine aminopeptidase, S33 SB48_HM08orf02131 PF10776 Protein of unknown function (DUF2600) SB48_HM08orf02138 PF01795 MraW methylase family SB48_HM08orf02141 PF10732 Protein of unknown function (DUF2524) SB48_HM08orf02144 PF07690 Major Facilitator Superfamily SB48_HM08orf02146 PF09334 tRNA synthetases class I (M) SB48_HM08orf02146 PF13603 Leucyl-tRNA synthetase, Domain 2 SB48_HM08orf02146 PF00133 tRNA synthetases class I (I, L, M and V) SB48_HM08orf02146 PF08264 Anticodon-binding domain of tRNA SB48_HM08orf02151 PF10957 Sporulation protein Cse60 SB48_HM08orf02153 PF14667 Polysaccharide biosynthesis C-terminal domain SB48_HM08orf02153 PF01943 Polysaccharide biosynthesis protein SB48_HM08orf02155 PF08220 DeoR-like helix-turn-helix domain SB48_HM08orf02159 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf02161 PF01063 Amino-transferase class IV SB48_HM08orf02163 PF02834 LigT like Phosphoesterase SB48_HM08orf02168 PF01636 Phosphotransferase enzyme family SB48_HM08orf02169 PF14165 YtzH-like protein SB48_HM08orf02170 PF02390 Putative methyltransferase SB48_HM08orf02176 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf02179 PF03413 Peptidase propeptide and YPEB domain SB48_HM08orf02181 PF05343 M42 glutamyl aminopeptidase SB48_HM08orf02183 PF01931 Protein of unknown function DUF84 SB48_HM08orf02187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf02187 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf02187 PF09308 LuxQ, periplasmic SB48_HM08orf02187 PF00072 Response regulator receiver domain SB48_HM08orf02189 PF01739 CheR methyltransferase, SAM binding domain SB48_HM08orf02189 PF03705 CheR methyltransferase, all-alpha domain SB48_HM08orf02190 PF07228 Stage II sporulation protein E (SpoIIE) SB48_HM08orf02190 PF13426 PAS domain SB48_HM08orf02193 PF00085 Thioredoxin SB48_HM08orf02198 PF07285 Protein of unknown function (DUF1444) SB48_HM08orf02200 PF01588 Putative tRNA binding domain SB48_HM08orf02200 PF14794 Domain of unknown function (DUF4479) SB48_HM08orf02206 PF09397 Ftsk gamma domain SB48_HM08orf02206 PF01580 FtsK/SpoIIIE family SB48_HM08orf02206 PF17854 FtsK alpha domain SB48_HM08orf02213 PF01225 Mur ligase family, catalytic domain SB48_HM08orf02213 PF02875 Mur ligase family, glutamate ligase domain SB48_HM08orf02213 PF08245 Mur ligase middle domain SB48_HM08orf02218 PF12732 YtxH-like protein SB48_HM08orf02222 PF00793 DAHP synthetase I family SB48_HM08orf02222 PF01817 Chorismate mutase type II SB48_HM08orf02225 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf02228 PF00850 Histone deacetylase domain SB48_HM08orf02230 PF00571 CBS domain SB48_HM08orf02231 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf02233 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf02233 PF00501 AMP-binding enzyme SB48_HM08orf02236 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf02237 PF08402 TOBE domain SB48_HM08orf02237 PF00005 ABC transporter SB48_HM08orf02239 PF06463 Molybdenum Cofactor Synthesis C SB48_HM08orf02239 PF04055 Radical SAM superfamily SB48_HM08orf02240 PF00994 Probable molybdopterin binding domain SB48_HM08orf02242 PF12804 MobA-like NTP transferase domain SB48_HM08orf02244 PF03453 MoeA N-terminal region (domain I and II) SB48_HM08orf02244 PF03454 MoeA C-terminal region (domain IV) SB48_HM08orf02244 PF00994 Probable molybdopterin binding domain SB48_HM08orf02246 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SB48_HM08orf02248 PF02391 MoaE protein SB48_HM08orf02250 PF02597 ThiS family SB48_HM08orf02251 PF01967 MoaC family SB48_HM08orf02252 PF00899 ThiF family SB48_HM08orf02255 PF07849 Protein of unknown function (DUF1641) SB48_HM08orf02257 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SB48_HM08orf02257 PF01568 Molydopterin dinucleotide binding domain SB48_HM08orf02257 PF00037 4Fe-4S binding domain SB48_HM08orf02257 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SB48_HM08orf02257 PF00384 Molybdopterin oxidoreductase SB48_HM08orf02259 PF02634 FdhD/NarQ family SB48_HM08orf02264 PF01479 S4 domain SB48_HM08orf02264 PF00579 tRNA synthetases class I (W and Y) SB48_HM08orf02266 PF00158 Sigma-54 interaction domain SB48_HM08orf02266 PF00989 PAS fold SB48_HM08orf02266 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf02269 PF00171 Aldehyde dehydrogenase family SB48_HM08orf02270 PF01619 Proline dehydrogenase SB48_HM08orf02272 PF01479 S4 domain SB48_HM08orf02272 PF00163 Ribosomal protein S4/S9 N-terminal domain SB48_HM08orf02276 PF00990 Diguanylate cyclase, GGDEF domain SB48_HM08orf02278 PF13185 GAF domain SB48_HM08orf02279 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf02282 PF06160 Septation ring formation regulator, EzrA SB48_HM08orf02283 PF00266 Aminotransferase class-V SB48_HM08orf02284 PF02926 THUMP domain SB48_HM08orf02284 PF02568 Thiamine biosynthesis protein (ThiI) SB48_HM08orf02285 PF00269 Small, acid-soluble spore proteins, alpha/beta type SB48_HM08orf02286 PF00501 AMP-binding enzyme SB48_HM08orf02286 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf02288 PF01343 Peptidase family S49 SB48_HM08orf02289 PF06271 RDD family SB48_HM08orf02293 PF09579 Sporulation protein YtfJ (Spore_YtfJ) SB48_HM08orf02296 PF08534 Redoxin SB48_HM08orf02299 PF02384 N-6 DNA Methylase SB48_HM08orf02302 PF00871 Acetokinase family SB48_HM08orf02307 PF00582 Universal stress protein family SB48_HM08orf02311 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SB48_HM08orf02311 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SB48_HM08orf02313 PF01321 Creatinase/Prolidase N-terminal domain SB48_HM08orf02313 PF00557 Metallopeptidase family M24 SB48_HM08orf02318 PF07085 DRTGG domain SB48_HM08orf02318 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf02318 PF00571 CBS domain SB48_HM08orf02318 PF03061 Thioesterase superfamily SB48_HM08orf02321 PF01368 DHH family SB48_HM08orf02321 PF02272 DHHA1 domain SB48_HM08orf02324 PF14034 Sporulation protein YtrH SB48_HM08orf02325 PF01336 OB-fold nucleic acid binding domain SB48_HM08orf02325 PF02811 PHP domain SB48_HM08orf02325 PF14579 Helix-hairpin-helix motif SB48_HM08orf02325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SB48_HM08orf02325 PF07733 Bacterial DNA polymerase III alpha NTPase domain SB48_HM08orf02326 PF03949 Malic enzyme, NAD binding domain SB48_HM08orf02326 PF00390 Malic enzyme, N-terminal domain SB48_HM08orf02328 PF17848 Acetyl-coA carboxylase zinc finger domain SB48_HM08orf02328 PF01039 Carboxyl transferase domain SB48_HM08orf02329 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SB48_HM08orf02331 PF00365 Phosphofructokinase SB48_HM08orf02333 PF00391 PEP-utilising enzyme, mobile domain SB48_HM08orf02333 PF02887 Pyruvate kinase, alpha/beta domain SB48_HM08orf02333 PF00224 Pyruvate kinase, barrel domain SB48_HM08orf02334 PF01594 AI-2E family transporter SB48_HM08orf02335 PF04284 Protein of unknown function (DUF441) SB48_HM08orf02337 PF00285 Citrate synthase, C-terminal domain SB48_HM08orf02338 PF00180 Isocitrate/isopropylmalate dehydrogenase SB48_HM08orf02340 PF00056 lactate/malate dehydrogenase, NAD binding domain SB48_HM08orf02340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SB48_HM08orf02343 PF01367 5'-3' exonuclease, C-terminal SAM fold SB48_HM08orf02343 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SB48_HM08orf02343 PF00476 DNA polymerase family A SB48_HM08orf02344 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SB48_HM08orf02344 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SB48_HM08orf02344 PF06827 Zinc finger found in FPG and IleRS SB48_HM08orf02347 PF02659 Putative manganese efflux pump SB48_HM08orf02349 PF01121 Dephospho-CoA kinase SB48_HM08orf02350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SB48_HM08orf02350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SB48_HM08orf02351 PF03477 ATP cone domain SB48_HM08orf02352 PF07261 Replication initiation and membrane attachment SB48_HM08orf02354 PF01695 IstB-like ATP binding protein SB48_HM08orf02354 PF07319 Primosomal protein DnaI N-terminus SB48_HM08orf02356 PF08812 YtxC-like family SB48_HM08orf02360 PF03129 Anticodon binding domain SB48_HM08orf02360 PF02824 TGS domain SB48_HM08orf02360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SB48_HM08orf02360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SB48_HM08orf02366 PF05198 Translation initiation factor IF-3, N-terminal domain SB48_HM08orf02366 PF00707 Translation initiation factor IF-3, C-terminal domain SB48_HM08orf02367 PF01632 Ribosomal protein L35 SB48_HM08orf02369 PF00453 Ribosomal protein L20 SB48_HM08orf02372 PF00692 dUTPase SB48_HM08orf02378 PF00698 Acyl transferase domain SB48_HM08orf02378 PF00550 Phosphopantetheine attachment site SB48_HM08orf02378 PF02801 Beta-ketoacyl synthase, C-terminal domain SB48_HM08orf02378 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf02378 PF00109 Beta-ketoacyl synthase, N-terminal domain SB48_HM08orf02378 PF16197 Ketoacyl-synthetase C-terminal extension SB48_HM08orf02378 PF14765 Polyketide synthase dehydratase SB48_HM08orf02378 PF08659 KR domain SB48_HM08orf02378 PF00107 Zinc-binding dehydrogenase SB48_HM08orf02381 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf02381 PF08447 PAS fold SB48_HM08orf02381 PF13426 PAS domain SB48_HM08orf02383 PF03358 NADPH-dependent FMN reductase SB48_HM08orf02387 PF06508 Queuosine biosynthesis protein QueC SB48_HM08orf02392 PF03551 Transcriptional regulator PadR-like family SB48_HM08orf02394 PF03992 Antibiotic biosynthesis monooxygenase SB48_HM08orf02398 PF01609 Transposase DDE domain SB48_HM08orf02402 PF14098 Small, acid-soluble spore protein I SB48_HM08orf02403 PF00588 SpoU rRNA Methylase family SB48_HM08orf02403 PF08032 RNA 2'-O ribose methyltransferase substrate binding SB48_HM08orf02407 PF01409 tRNA synthetases class II core domain (F) SB48_HM08orf02407 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SB48_HM08orf02409 PF03483 B3/4 domain SB48_HM08orf02409 PF03484 tRNA synthetase B5 domain SB48_HM08orf02409 PF03147 Ferredoxin-fold anticodon binding domain SB48_HM08orf02409 PF01588 Putative tRNA binding domain SB48_HM08orf02409 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SB48_HM08orf02410 PF11858 Domain of unknown function (DUF3378) SB48_HM08orf02410 PF01351 Ribonuclease HII SB48_HM08orf02411 PF05164 Cell division protein ZapA SB48_HM08orf02414 PF02674 Colicin V production protein SB48_HM08orf02419 PF14716 Helix-hairpin-helix domain SB48_HM08orf02419 PF02811 PHP domain SB48_HM08orf02419 PF14791 DNA polymerase beta thumb SB48_HM08orf02421 PF01713 Smr domain SB48_HM08orf02421 PF00488 MutS domain V SB48_HM08orf02423 PF00501 AMP-binding enzyme SB48_HM08orf02423 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf02427 PF08359 YsiA-like protein, C-terminal region SB48_HM08orf02427 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf02428 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf02430 PF01012 Electron transfer flavoprotein domain SB48_HM08orf02431 PF00766 Electron transfer flavoprotein FAD-binding domain SB48_HM08orf02431 PF01012 Electron transfer flavoprotein domain SB48_HM08orf02434 PF00085 Thioredoxin SB48_HM08orf02435 PF08459 UvrC Helix-hairpin-helix N-terminal SB48_HM08orf02435 PF02151 UvrB/uvrC motif SB48_HM08orf02435 PF01541 GIY-YIG catalytic domain SB48_HM08orf02437 PF13840 ACT domain SB48_HM08orf02437 PF00696 Amino acid kinase family SB48_HM08orf02440 PF10702 Protein of unknown function (DUF2507) SB48_HM08orf02445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SB48_HM08orf02446 PF02910 Fumarate reductase flavoprotein C-term SB48_HM08orf02446 PF00890 FAD binding domain SB48_HM08orf02448 PF13085 2Fe-2S iron-sulfur cluster binding domain SB48_HM08orf02448 PF13183 4Fe-4S dicluster domain SB48_HM08orf02449 PF03061 Thioesterase superfamily SB48_HM08orf02450 PF00196 Bacterial regulatory proteins, luxR family SB48_HM08orf02463 PF01047 MarR family SB48_HM08orf02465 PF01177 Asp/Glu/Hydantoin racemase SB48_HM08orf02467 PF07875 Coat F domain SB48_HM08orf02468 PF00107 Zinc-binding dehydrogenase SB48_HM08orf02468 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf02468 PF13823 Alcohol dehydrogenase GroES-associated SB48_HM08orf02469 PF07875 Coat F domain SB48_HM08orf02472 PF10646 Sporulation and spore germination SB48_HM08orf02474 PF01725 Ham1 family SB48_HM08orf02476 PF12850 Calcineurin-like phosphoesterase superfamily domain SB48_HM08orf02487 PF10710 Protein of unknown function (DUF2512) SB48_HM08orf02488 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf02488 PF01348 Type II intron maturase SB48_HM08orf02492 PF05698 Bacterial trigger factor protein (TF) C-terminus SB48_HM08orf02492 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SB48_HM08orf02492 PF05697 Bacterial trigger factor protein (TF) SB48_HM08orf02494 PF06689 ClpX C4-type zinc finger SB48_HM08orf02494 PF10431 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf02494 PF07724 AAA domain (Cdc48 subfamily) SB48_HM08orf02497 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf02497 PF05362 Lon protease (S16) C-terminal proteolytic domain SB48_HM08orf02498 PF02190 ATP-dependent protease La (LON) substrate-binding domain SB48_HM08orf02498 PF05362 Lon protease (S16) C-terminal proteolytic domain SB48_HM08orf02498 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf02500 PF01926 50S ribosome-binding GTPase SB48_HM08orf02505 PF01488 Shikimate / quinate 5-dehydrogenase SB48_HM08orf02505 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SB48_HM08orf02505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SB48_HM08orf02507 PF01578 Cytochrome C assembly protein SB48_HM08orf02508 PF03900 Porphobilinogen deaminase, C-terminal domain SB48_HM08orf02508 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SB48_HM08orf02512 PF00490 Delta-aminolevulinic acid dehydratase SB48_HM08orf02514 PF00202 Aminotransferase class-III SB48_HM08orf02518 PF01476 LysM domain SB48_HM08orf02518 PF01476 LysM domain SB48_HM08orf02527 PF10458 Valyl tRNA synthetase tRNA binding arm SB48_HM08orf02527 PF00133 tRNA synthetases class I (I, L, M and V) SB48_HM08orf02527 PF08264 Anticodon-binding domain of tRNA SB48_HM08orf02529 PF08245 Mur ligase middle domain SB48_HM08orf02529 PF02875 Mur ligase family, glutamate ligase domain SB48_HM08orf02542 PF00437 Type II/IV secretion system protein SB48_HM08orf02542 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SB48_HM08orf02544 PF00437 Type II/IV secretion system protein SB48_HM08orf02545 PF00482 Type II secretion system (T2SS), protein F SB48_HM08orf02553 PF01478 Type IV leader peptidase family SB48_HM08orf02553 PF06750 Bacterial Peptidase A24 N-terminal domain SB48_HM08orf02560 PF04002 RadC-like JAB domain SB48_HM08orf02562 PF04085 rod shape-determining protein MreC SB48_HM08orf02568 PF03775 Septum formation inhibitor MinC, C-terminal domain SB48_HM08orf02569 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SB48_HM08orf02573 PF02163 Peptidase family M50 SB48_HM08orf02575 PF10150 Ribonuclease E/G family SB48_HM08orf02575 PF00575 S1 RNA binding domain SB48_HM08orf02578 PF00829 Ribosomal prokaryotic L21 protein SB48_HM08orf02580 PF04327 Cysteine protease Prp SB48_HM08orf02581 PF01016 Ribosomal L27 protein SB48_HM08orf02582 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SB48_HM08orf02582 PF14682 Sporulation initiation phospho-transferase B, C-terminal SB48_HM08orf02583 PF01018 GTP1/OBG SB48_HM08orf02583 PF01926 50S ribosome-binding GTPase SB48_HM08orf02583 PF09269 Domain of unknown function (DUF1967) SB48_HM08orf02585 PF01842 ACT domain SB48_HM08orf02586 PF00800 Prephenate dehydratase SB48_HM08orf02586 PF01842 ACT domain SB48_HM08orf02587 PF02829 3H domain SB48_HM08orf02587 PF08279 HTH domain SB48_HM08orf02589 PF01476 LysM domain SB48_HM08orf02594 PF01709 Transcriptional regulator SB48_HM08orf02601 PF07499 RuvA, C-terminal domain SB48_HM08orf02601 PF01330 RuvA N terminal domain SB48_HM08orf02602 PF17864 RuvB AAA lid domain SB48_HM08orf02602 PF05491 RuvB C-terminal winged helix domain SB48_HM08orf02602 PF05496 Holliday junction DNA helicase RuvB P-loop domain SB48_HM08orf02603 PF11146 Protein of unknown function (DUF2905) SB48_HM08orf02604 PF02547 Queuosine biosynthesis protein SB48_HM08orf02606 PF01702 Queuine tRNA-ribosyltransferase SB48_HM08orf02608 PF02699 Preprotein translocase subunit SB48_HM08orf02611 PF04239 Protein of unknown function (DUF421) SB48_HM08orf02613 PF14667 Polysaccharide biosynthesis C-terminal domain SB48_HM08orf02613 PF01943 Polysaccharide biosynthesis protein SB48_HM08orf02619 PF02355 Protein export membrane protein SB48_HM08orf02619 PF07549 SecD/SecF GG Motif SB48_HM08orf02622 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SB48_HM08orf02622 PF02272 DHHA1 domain SB48_HM08orf02622 PF01368 DHH family SB48_HM08orf02622 PF17768 RecJ OB domain SB48_HM08orf02623 PF00156 Phosphoribosyl transferase domain SB48_HM08orf02627 PF02824 TGS domain SB48_HM08orf02627 PF04607 Region found in RelA / SpoT proteins SB48_HM08orf02627 PF13291 ACT domain SB48_HM08orf02628 PF02580 D-Tyr-tRNA(Tyr) deacylase SB48_HM08orf02629 PF01047 MarR family SB48_HM08orf02632 PF07690 Major Facilitator Superfamily SB48_HM08orf02633 PF08239 Bacterial SH3 domain SB48_HM08orf02633 PF01520 N-acetylmuramoyl-L-alanine amidase SB48_HM08orf02640 PF03129 Anticodon binding domain SB48_HM08orf02640 PF13393 Histidyl-tRNA synthetase SB48_HM08orf02642 PF00152 tRNA synthetases class II (D, K and N) SB48_HM08orf02642 PF02938 GAD domain SB48_HM08orf02642 PF01336 OB-fold nucleic acid binding domain SB48_HM08orf02644 PF01758 Sodium Bile acid symporter family SB48_HM08orf02647 PF00899 ThiF family SB48_HM08orf02651 PF12002 MgsA AAA+ ATPase C terminal SB48_HM08orf02651 PF05496 Holliday junction DNA helicase RuvB P-loop domain SB48_HM08orf02651 PF16193 AAA C-terminal domain SB48_HM08orf02658 PF02082 Transcriptional regulator SB48_HM08orf02660 PF00266 Aminotransferase class-V SB48_HM08orf02666 PF14490 Helix-hairpin-helix containing domain SB48_HM08orf02666 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SB48_HM08orf02666 PF13538 UvrD-like helicase C-terminal domain SB48_HM08orf02669 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB48_HM08orf02669 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SB48_HM08orf02681 PF01594 AI-2E family transporter SB48_HM08orf02684 PF01411 tRNA synthetases class II (A) SB48_HM08orf02684 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SB48_HM08orf02684 PF02272 DHHA1 domain SB48_HM08orf02685 PF06135 IreB regulatory phosphoprotein SB48_HM08orf02686 PF03652 Holliday junction resolvase SB48_HM08orf02687 PF06949 Protein of unknown function (DUF1292) SB48_HM08orf02689 PF02618 YceG-like family SB48_HM08orf02690 PF01596 O-methyltransferase SB48_HM08orf02691 PF00485 Phosphoribulokinase / Uridine kinase family SB48_HM08orf02693 PF03449 Transcription elongation factor, N-terminal SB48_HM08orf02693 PF01272 Transcription elongation factor, GreA/GreB, C-term SB48_HM08orf02695 PF07423 Domain of unknown function (DUF1510) SB48_HM08orf02697 PF01048 Phosphorylase superfamily SB48_HM08orf02698 PF14143 YrhC-like protein SB48_HM08orf02701 PF09501 Probable sporulation protein (Bac_small_yrzI) SB48_HM08orf02703 PF00578 AhpC/TSA family SB48_HM08orf02704 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf02704 PF13192 Thioredoxin domain SB48_HM08orf02707 PF04542 Sigma-70 region 2 SB48_HM08orf02707 PF04545 Sigma-70, region 4 SB48_HM08orf02709 PF01066 CDP-alcohol phosphatidyltransferase SB48_HM08orf02710 PF08970 Sporulation inhibitor A SB48_HM08orf02713 PF16916 Dimerisation domain of Zinc Transporter SB48_HM08orf02713 PF01545 Cation efflux family SB48_HM08orf02717 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SB48_HM08orf02718 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SB48_HM08orf02728 PF00578 AhpC/TSA family SB48_HM08orf02731 PF00011 Hsp20/alpha crystallin family SB48_HM08orf02732 PF07732 Multicopper oxidase SB48_HM08orf02732 PF07731 Multicopper oxidase SB48_HM08orf02733 PF05651 Putative sugar diacid recognition SB48_HM08orf02733 PF13556 PucR C-terminal helix-turn-helix domain SB48_HM08orf02733 PF17853 GGDEF-like domain SB48_HM08orf02736 PF01565 FAD binding domain SB48_HM08orf02736 PF02913 FAD linked oxidases, C-terminal domain SB48_HM08orf02737 PF13183 4Fe-4S dicluster domain SB48_HM08orf02737 PF02754 Cysteine-rich domain SB48_HM08orf02743 PF01926 50S ribosome-binding GTPase SB48_HM08orf02744 PF08501 Shikimate dehydrogenase substrate binding domain SB48_HM08orf02744 PF01488 Shikimate / quinate 5-dehydrogenase SB48_HM08orf02744 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SB48_HM08orf02745 PF01985 CRS1 / YhbY (CRM) domain SB48_HM08orf02746 PF01467 Cytidylyltransferase-like SB48_HM08orf02748 PF01966 HD domain SB48_HM08orf02750 PF13649 Methyltransferase domain SB48_HM08orf02752 PF14748 Pyrroline-5-carboxylate reductase dimerisation SB48_HM08orf02752 PF03807 NADP oxidoreductase coenzyme F420-dependent SB48_HM08orf02755 PF10531 SLBB domain SB48_HM08orf02757 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SB48_HM08orf02758 PF03772 Competence protein SB48_HM08orf02758 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf02758 PF13567 Domain of unknown function (DUF4131) SB48_HM08orf02761 PF14141 YqzM-like protein SB48_HM08orf02762 PF06144 DNA polymerase III, delta subunit SB48_HM08orf02764 PF01649 Ribosomal protein S20 SB48_HM08orf02767 PF03418 Germination protease SB48_HM08orf02769 PF07454 Stage II sporulation protein P (SpoIIP) SB48_HM08orf02770 PF03144 Elongation factor Tu domain 2 SB48_HM08orf02770 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf02770 PF06421 GTP-binding protein LepA C-terminus SB48_HM08orf02770 PF00679 Elongation factor G C-terminus SB48_HM08orf02772 PF04055 Radical SAM superfamily SB48_HM08orf02772 PF06969 HemN C-terminal domain SB48_HM08orf02773 PF01628 HrcA protein C terminal domain SB48_HM08orf02774 PF01025 GrpE SB48_HM08orf02775 PF00012 Hsp70 protein SB48_HM08orf02777 PF00684 DnaJ central domain SB48_HM08orf02777 PF01556 DnaJ C terminal domain SB48_HM08orf02777 PF00226 DnaJ domain SB48_HM08orf02780 PF04452 RNA methyltransferase SB48_HM08orf02781 PF04055 Radical SAM superfamily SB48_HM08orf02781 PF00919 Uncharacterized protein family UPF0004 SB48_HM08orf02781 PF01938 TRAM domain SB48_HM08orf02784 PF02690 Na+/Pi-cotransporter SB48_HM08orf02786 PF00708 Acylphosphatase SB48_HM08orf02787 PF01165 Ribosomal protein S21 SB48_HM08orf02788 PF09424 Yqey-like protein SB48_HM08orf02791 PF07873 YabP family SB48_HM08orf02792 PF06898 Putative stage IV sporulation protein YqfD SB48_HM08orf02793 PF02562 PhoH-like protein SB48_HM08orf02797 PF07698 7TM receptor with intracellular HD hydrolase SB48_HM08orf02797 PF01966 HD domain SB48_HM08orf02797 PF07697 7TM-HD extracellular SB48_HM08orf02798 PF02130 Uncharacterized protein family UPF0054 SB48_HM08orf02799 PF01219 Prokaryotic diacylglycerol kinase SB48_HM08orf02802 PF01926 50S ribosome-binding GTPase SB48_HM08orf02802 PF07650 KH domain SB48_HM08orf02803 PF14006 YqzL-like protein SB48_HM08orf02805 PF02565 Recombination protein O C terminal SB48_HM08orf02805 PF11967 Recombination protein O N terminal SB48_HM08orf02807 PF08279 HTH domain SB48_HM08orf02807 PF00571 CBS domain SB48_HM08orf02808 PF03618 Kinase/pyrophosphorylase SB48_HM08orf02813 PF10410 DnaB-helicase binding domain of primase SB48_HM08orf02813 PF01807 CHC2 zinc finger SB48_HM08orf02813 PF08275 DNA primase catalytic core, N-terminal domain SB48_HM08orf02814 PF00140 Sigma-70 factor, region 1.2 SB48_HM08orf02814 PF03979 Sigma-70 factor, region 1.1 SB48_HM08orf02814 PF04545 Sigma-70, region 4 SB48_HM08orf02814 PF04539 Sigma-70 region 3 SB48_HM08orf02814 PF04542 Sigma-70 region 2 SB48_HM08orf02819 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SB48_HM08orf02820 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SB48_HM08orf02821 PF01784 NIF3 (NGG1p interacting factor 3) SB48_HM08orf02825 PF02401 LytB protein SB48_HM08orf02831 PF00271 Helicase conserved C-terminal domain SB48_HM08orf02831 PF00270 DEAD/DEAH box helicase SB48_HM08orf02834 PF01261 Xylose isomerase-like TIM barrel SB48_HM08orf02836 PF00877 NlpC/P60 family SB48_HM08orf02841 PF00005 ABC transporter SB48_HM08orf02842 PF00950 ABC 3 transport family SB48_HM08orf02844 PF01475 Ferric uptake regulator family SB48_HM08orf02848 PF04551 GcpE protein SB48_HM08orf02850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SB48_HM08orf02850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SB48_HM08orf02851 PF07690 Major Facilitator Superfamily SB48_HM08orf02854 PF03717 Penicillin-binding Protein dimerisation domain SB48_HM08orf02854 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf02856 PF00471 Ribosomal protein L33 SB48_HM08orf02861 PF01694 Rhomboid family SB48_HM08orf02864 PF06014 Bacterial protein of unknown function (DUF910) SB48_HM08orf02865 PF00480 ROK family SB48_HM08orf02867 PF10958 Protein of unknown function (DUF2759) SB48_HM08orf02868 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf02870 PF11117 Protein of unknown function (DUF2626) SB48_HM08orf02872 PF00437 Type II/IV secretion system protein SB48_HM08orf02873 PF00482 Type II secretion system (T2SS), protein F SB48_HM08orf02876 PF07963 Prokaryotic N-terminal methylation motif SB48_HM08orf02883 PF01202 Shikimate kinase SB48_HM08orf02885 PF11079 Bacterial protein YqhG of unknown function SB48_HM08orf02887 PF00176 SNF2 family N-terminal domain SB48_HM08orf02887 PF00271 Helicase conserved C-terminal domain SB48_HM08orf02891 PF08669 Glycine cleavage T-protein C-terminal barrel domain SB48_HM08orf02891 PF01571 Aminomethyltransferase folate-binding domain SB48_HM08orf02892 PF02347 Glycine cleavage system P-protein SB48_HM08orf02893 PF02347 Glycine cleavage system P-protein SB48_HM08orf02894 PF00581 Rhodanese-like domain SB48_HM08orf02896 PF03099 Biotin/lipoate A/B protein ligase family SB48_HM08orf02899 PF03477 ATP cone domain SB48_HM08orf02899 PF00317 Ribonucleotide reductase, all-alpha domain SB48_HM08orf02899 PF02867 Ribonucleotide reductase, barrel domain SB48_HM08orf02903 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf02905 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf02908 PF00171 Aldehyde dehydrogenase family SB48_HM08orf02909 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SB48_HM08orf02909 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf02910 PF00108 Thiolase, N-terminal domain SB48_HM08orf02910 PF02803 Thiolase, C-terminal domain SB48_HM08orf02911 PF07848 PaaX-like protein SB48_HM08orf02911 PF08223 PaaX-like protein C-terminal domain SB48_HM08orf02913 PF03060 Nitronate monooxygenase SB48_HM08orf02914 PF01734 Patatin-like phospholipase SB48_HM08orf02917 PF07136 Protein of unknown function (DUF1385) SB48_HM08orf02919 PF11085 Conserved membrane protein YqhR SB48_HM08orf02923 PF01220 Dehydroquinase class II SB48_HM08orf02924 PF00557 Metallopeptidase family M24 SB48_HM08orf02924 PF01321 Creatinase/Prolidase N-terminal domain SB48_HM08orf02925 PF09285 Elongation factor P, C-terminal SB48_HM08orf02925 PF01132 Elongation factor P (EF-P) OB domain SB48_HM08orf02925 PF08207 Elongation factor P (EF-P) KOW-like domain SB48_HM08orf02928 PF09548 Stage III sporulation protein AB (spore_III_AB) SB48_HM08orf02929 PF06686 Stage III sporulation protein AC/AD protein family SB48_HM08orf02931 PF06686 Stage III sporulation protein AC/AD protein family SB48_HM08orf02933 PF09546 Stage III sporulation protein AE (spore_III_AE) SB48_HM08orf02934 PF09581 Stage III sporulation protein AF (Spore_III_AF) SB48_HM08orf02938 PF12685 SpoIIIAH-like protein SB48_HM08orf02941 PF00364 Biotin-requiring enzyme SB48_HM08orf02942 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SB48_HM08orf02942 PF00289 Biotin carboxylase, N-terminal domain SB48_HM08orf02942 PF02785 Biotin carboxylase C-terminal domain SB48_HM08orf02943 PF03780 Asp23 family, cell envelope-related function SB48_HM08orf02944 PF01029 NusB family SB48_HM08orf02945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SB48_HM08orf02945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SB48_HM08orf02948 PF13742 OB-fold nucleic acid binding domain SB48_HM08orf02948 PF02601 Exonuclease VII, large subunit SB48_HM08orf02949 PF02609 Exonuclease VII small subunit SB48_HM08orf02951 PF00348 Polyprenyl synthetase SB48_HM08orf02952 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf02952 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SB48_HM08orf02952 PF02780 Transketolase, C-terminal domain SB48_HM08orf02954 PF01479 S4 domain SB48_HM08orf02954 PF01728 FtsJ-like methyltransferase SB48_HM08orf02956 PF01316 Arginine repressor, DNA binding domain SB48_HM08orf02956 PF02863 Arginine repressor, C-terminal domain SB48_HM08orf02957 PF13476 AAA domain SB48_HM08orf02958 PF05580 SpoIVB peptidase S55 SB48_HM08orf02958 PF17820 PDZ domain SB48_HM08orf02960 PF00072 Response regulator receiver domain SB48_HM08orf02960 PF08769 Sporulation initiation factor Spo0A C terminal SB48_HM08orf02962 PF03009 Glycerophosphoryl diester phosphodiesterase family SB48_HM08orf02969 PF00158 Sigma-54 interaction domain SB48_HM08orf02969 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf02969 PF00989 PAS fold SB48_HM08orf02971 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf02971 PF00158 Sigma-54 interaction domain SB48_HM08orf02971 PF00989 PAS fold SB48_HM08orf02973 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SB48_HM08orf02973 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB48_HM08orf02974 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf02974 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SB48_HM08orf02975 PF00676 Dehydrogenase E1 component SB48_HM08orf02977 PF02780 Transketolase, C-terminal domain SB48_HM08orf02977 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf02979 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SB48_HM08orf02979 PF00364 Biotin-requiring enzyme SB48_HM08orf02979 PF02817 e3 binding domain SB48_HM08orf02983 PF00294 pfkB family carbohydrate kinase SB48_HM08orf02986 PF06491 Disulphide isomerase SB48_HM08orf02989 PF03734 L,D-transpeptidase catalytic domain SB48_HM08orf02993 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf02993 PF07687 Peptidase dimerisation domain SB48_HM08orf02996 PF11798 IMS family HHH motif SB48_HM08orf02996 PF00817 impB/mucB/samB family SB48_HM08orf02996 PF11799 impB/mucB/samB family C-terminal domain SB48_HM08orf02999 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SB48_HM08orf02999 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SB48_HM08orf03002 PF12706 Beta-lactamase superfamily domain SB48_HM08orf03004 PF14748 Pyrroline-5-carboxylate reductase dimerisation SB48_HM08orf03004 PF03807 NADP oxidoreductase coenzyme F420-dependent SB48_HM08orf03009 PF00106 short chain dehydrogenase SB48_HM08orf03011 PF00817 impB/mucB/samB family SB48_HM08orf03011 PF11799 impB/mucB/samB family C-terminal domain SB48_HM08orf03013 PF08863 YolD-like protein SB48_HM08orf03017 PF00704 Glycosyl hydrolases family 18 SB48_HM08orf03017 PF01476 LysM domain SB48_HM08orf03019 PF12146 Serine aminopeptidase, S33 SB48_HM08orf03023 PF05816 Toxic anion resistance protein (TelA) SB48_HM08orf03025 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein SB48_HM08orf03031 PF00248 Aldo/keto reductase family SB48_HM08orf03033 PF13072 Mother cell inhibitor of FtsZ SB48_HM08orf03034 PF00293 NUDIX domain SB48_HM08orf03036 PF01944 Stage II sporulation protein M SB48_HM08orf03039 PF01475 Ferric uptake regulator family SB48_HM08orf03041 PF14004 Protein of unknown function (DUF4227) SB48_HM08orf03042 PF00589 Phage integrase family SB48_HM08orf03042 PF02899 Phage integrase, N-terminal SAM-like domain SB48_HM08orf03045 PF07943 Penicillin-binding protein 5, C-terminal domain SB48_HM08orf03045 PF00768 D-alanyl-D-alanine carboxypeptidase SB48_HM08orf03047 PF01740 STAS domain SB48_HM08orf03049 PF13581 Histidine kinase-like ATPase domain SB48_HM08orf03050 PF04542 Sigma-70 region 2 SB48_HM08orf03050 PF04539 Sigma-70 region 3 SB48_HM08orf03050 PF04545 Sigma-70, region 4 SB48_HM08orf03052 PF12164 Stage V sporulation protein AA SB48_HM08orf03054 PF13782 Stage V sporulation protein AB SB48_HM08orf03056 PF14097 Stage V sporulation protein AE1 SB48_HM08orf03058 PF03323 Bacillus/Clostridium GerA spore germination protein SB48_HM08orf03059 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SB48_HM08orf03059 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SB48_HM08orf03061 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf03063 PF09680 Family of unknown function SB48_HM08orf03065 PF02616 Segregation and condensation protein ScpA SB48_HM08orf03068 PF04079 Segregation and condensation complex subunit ScpB SB48_HM08orf03070 PF00768 D-alanyl-D-alanine carboxypeptidase SB48_HM08orf03070 PF07943 Penicillin-binding protein 5, C-terminal domain SB48_HM08orf03071 PF07670 Nucleoside recognition SB48_HM08orf03073 PF07670 Nucleoside recognition SB48_HM08orf03075 PF00849 RNA pseudouridylate synthase SB48_HM08orf03075 PF01479 S4 domain SB48_HM08orf03077 PF00578 AhpC/TSA family SB48_HM08orf03079 PF05140 ResB-like family SB48_HM08orf03081 PF01578 Cytochrome C assembly protein SB48_HM08orf03084 PF00072 Response regulator receiver domain SB48_HM08orf03084 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf03086 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf03086 PF00989 PAS fold SB48_HM08orf03086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf03086 PF00672 HAMP domain SB48_HM08orf03086 PF18698 Histidine kinase sensor domain SB48_HM08orf03089 PF01551 Peptidase family M23 SB48_HM08orf03089 PF01464 Transglycosylase SLT domain SB48_HM08orf03089 PF10145 Phage-related minor tail protein SB48_HM08orf03091 PF12822 ECF transporter, substrate-specific component SB48_HM08orf03100 PF00271 Helicase conserved C-terminal domain SB48_HM08orf03100 PF00270 DEAD/DEAH box helicase SB48_HM08orf03102 PF02517 CPBP intramembrane metalloprotease SB48_HM08orf03104 PF10864 Protein of unknown function (DUF2663) SB48_HM08orf03105 PF05067 Manganese containing catalase SB48_HM08orf03106 PF12652 CotJB protein SB48_HM08orf03109 PF00149 Calcineurin-like phosphoesterase SB48_HM08orf03113 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB48_HM08orf03113 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SB48_HM08orf03117 PF13367 PrsW family intramembrane metalloprotease SB48_HM08orf03121 PF07486 Cell Wall Hydrolase SB48_HM08orf03121 PF01471 Putative peptidoglycan binding domain SB48_HM08orf03123 PF03413 Peptidase propeptide and YPEB domain SB48_HM08orf03123 PF14620 YpeB sporulation SB48_HM08orf03125 PF12945 Flagellar protein YcgR SB48_HM08orf03125 PF07238 PilZ domain SB48_HM08orf03128 PF02224 Cytidylate kinase SB48_HM08orf03131 PF00575 S1 RNA binding domain SB48_HM08orf03133 PF14140 YpzI-like protein SB48_HM08orf03137 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SB48_HM08orf03137 PF01926 50S ribosome-binding GTPase SB48_HM08orf03139 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SB48_HM08orf03139 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SB48_HM08orf03144 PF09547 Stage IV sporulation protein A (spore_IV_A) SB48_HM08orf03146 PF00216 Bacterial DNA-binding protein SB48_HM08orf03149 PF02081 Tryptophan RNA-binding attenuator protein SB48_HM08orf03150 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 SB48_HM08orf03152 PF01209 ubiE/COQ5 methyltransferase family SB48_HM08orf03154 PF00348 Polyprenyl synthetase SB48_HM08orf03156 PF00334 Nucleoside diphosphate kinase SB48_HM08orf03157 PF01739 CheR methyltransferase, SAM binding domain SB48_HM08orf03157 PF03705 CheR methyltransferase, all-alpha domain SB48_HM08orf03158 PF01264 Chorismate synthase SB48_HM08orf03160 PF01761 3-dehydroquinate synthase SB48_HM08orf03161 PF07736 Chorismate mutase type I SB48_HM08orf03162 PF00155 Aminotransferase class I and II SB48_HM08orf03164 PF02153 Prephenate dehydrogenase SB48_HM08orf03164 PF01842 ACT domain SB48_HM08orf03166 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SB48_HM08orf03173 PF08858 IDEAL domain SB48_HM08orf03173 PF08864 UPF0302 domain SB48_HM08orf03175 PF00355 Rieske [2Fe-2S] domain SB48_HM08orf03176 PF00033 Cytochrome b/b6/petB SB48_HM08orf03178 PF00032 Cytochrome b(C-terminal)/b6/petD SB48_HM08orf03178 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SB48_HM08orf03180 PF07187 Protein of unknown function (DUF1405) SB48_HM08orf03182 PF09577 Sporulation protein YpjB (SpoYpjB) SB48_HM08orf03183 PF04298 Putative neutral zinc metallopeptidase SB48_HM08orf03186 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SB48_HM08orf03186 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SB48_HM08orf03188 PF03819 MazG nucleotide pyrophosphohydrolase domain SB48_HM08orf03190 PF05173 Dihydrodipicolinate reductase, C-terminus SB48_HM08orf03190 PF01113 Dihydrodipicolinate reductase, N-terminus SB48_HM08orf03193 PF02585 GlcNAc-PI de-N-acetylase SB48_HM08orf03194 PF00534 Glycosyl transferases group 1 SB48_HM08orf03194 PF13439 Glycosyltransferase Family 4 SB48_HM08orf03195 PF01743 Poly A polymerase head domain SB48_HM08orf03195 PF12627 Probable RNA and SrmB- binding site of polymerase A SB48_HM08orf03195 PF13735 tRNA nucleotidyltransferase domain 2 putative SB48_HM08orf03196 PF08279 HTH domain SB48_HM08orf03196 PF02237 Biotin protein ligase C terminal domain SB48_HM08orf03196 PF03099 Biotin/lipoate A/B protein ligase family SB48_HM08orf03197 PF02548 Ketopantoate hydroxymethyltransferase SB48_HM08orf03198 PF02569 Pantoate-beta-alanine ligase SB48_HM08orf03199 PF02261 Aspartate decarboxylase SB48_HM08orf03202 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf03202 PF00929 Exonuclease SB48_HM08orf03202 PF13307 Helicase C-terminal domain SB48_HM08orf03207 PF00155 Aminotransferase class I and II SB48_HM08orf03208 PF00152 tRNA synthetases class II (D, K and N) SB48_HM08orf03208 PF01336 OB-fold nucleic acid binding domain SB48_HM08orf03209 PF01348 Type II intron maturase SB48_HM08orf03209 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf03210 PF07261 Replication initiation and membrane attachment SB48_HM08orf03211 PF00730 HhH-GPD superfamily base excision DNA repair protein SB48_HM08orf03211 PF00633 Helix-hairpin-helix motif SB48_HM08orf03211 PF10576 Iron-sulfur binding domain of endonuclease III SB48_HM08orf03215 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf03215 PF00912 Transglycosylase SB48_HM08orf03217 PF03838 Recombination protein U SB48_HM08orf03224 PF14179 YppG-like protein SB48_HM08orf03226 PF00011 Hsp20/alpha crystallin family SB48_HM08orf03228 PF00271 Helicase conserved C-terminal domain SB48_HM08orf03228 PF09369 Domain of unknown function (DUF1998) SB48_HM08orf03228 PF00270 DEAD/DEAH box helicase SB48_HM08orf03231 PF13482 RNase_H superfamily SB48_HM08orf03237 PF06908 YspA SLOG family SB48_HM08orf03238 PF05103 DivIVA protein SB48_HM08orf03243 PF02926 THUMP domain SB48_HM08orf03243 PF01170 Putative RNA methylase family UPF0020 SB48_HM08orf03244 PF02074 Carboxypeptidase Taq (M32) metallopeptidase SB48_HM08orf03248 PF00156 Phosphoribosyl transferase domain SB48_HM08orf03250 PF00860 Permease family SB48_HM08orf03257 PF00350 Dynamin family SB48_HM08orf03259 PF13411 MerR HTH family regulatory protein SB48_HM08orf03262 PF00120 Glutamine synthetase, catalytic domain SB48_HM08orf03262 PF03951 Glutamine synthetase, beta-Grasp domain SB48_HM08orf03264 PF14659 Phage integrase, N-terminal SAM-like domain SB48_HM08orf03264 PF00589 Phage integrase family SB48_HM08orf03267 PF02151 UvrB/uvrC motif SB48_HM08orf03267 PF00271 Helicase conserved C-terminal domain SB48_HM08orf03267 PF17757 UvrB interaction domain SB48_HM08orf03267 PF12344 Ultra-violet resistance protein B SB48_HM08orf03267 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf03269 PF11490 DNA polymerase III polC-type N-terminus II SB48_HM08orf03269 PF07733 Bacterial DNA polymerase III alpha NTPase domain SB48_HM08orf03269 PF00929 Exonuclease SB48_HM08orf03269 PF02811 PHP domain SB48_HM08orf03269 PF14579 Helix-hairpin-helix motif SB48_HM08orf03269 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SB48_HM08orf03275 PF01381 Helix-turn-helix SB48_HM08orf03284 PF00436 Single-strand binding protein family SB48_HM08orf03294 PF00589 Phage integrase family SB48_HM08orf03304 PF00574 Clp protease SB48_HM08orf03316 PF01464 Transglycosylase SLT domain SB48_HM08orf03326 PF04688 SPP1 phage holin SB48_HM08orf03327 PF01476 LysM domain SB48_HM08orf03327 PF00877 NlpC/P60 family SB48_HM08orf03331 PF01726 LexA DNA binding domain SB48_HM08orf03331 PF00717 Peptidase S24-like SB48_HM08orf03332 PF01476 LysM domain SB48_HM08orf03333 PF00239 Resolvase, N terminal domain SB48_HM08orf03334 PF05979 Bacterial protein of unknown function (DUF896) SB48_HM08orf03336 PF02780 Transketolase, C-terminal domain SB48_HM08orf03336 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf03336 PF00456 Transketolase, thiamine diphosphate binding domain SB48_HM08orf03339 PF03672 Uncharacterised protein family (UPF0154) SB48_HM08orf03342 PF02683 Cytochrome C biogenesis protein transmembrane region SB48_HM08orf03343 PF00072 Response regulator receiver domain SB48_HM08orf03346 PF07301 Protein of unknown function (DUF1453) SB48_HM08orf03347 PF11084 Protein of unknown function (DUF2621) SB48_HM08orf03352 PF01553 Acyltransferase SB48_HM08orf03355 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SB48_HM08orf03356 PF17676 LD-carboxypeptidase C-terminal domain SB48_HM08orf03356 PF02016 LD-carboxypeptidase N-terminal domain SB48_HM08orf03363 PF00313 'Cold-shock' DNA-binding domain SB48_HM08orf03366 PF05067 Manganese containing catalase SB48_HM08orf03369 PF01118 Semialdehyde dehydrogenase, NAD binding domain SB48_HM08orf03369 PF02774 Semialdehyde dehydrogenase, dimerisation domain SB48_HM08orf03370 PF01960 ArgJ family SB48_HM08orf03371 PF00696 Amino acid kinase family SB48_HM08orf03373 PF00202 Aminotransferase class-III SB48_HM08orf03374 PF00117 Glutamine amidotransferase class-I SB48_HM08orf03374 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SB48_HM08orf03375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SB48_HM08orf03375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SB48_HM08orf03375 PF02142 MGS-like domain SB48_HM08orf03377 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SB48_HM08orf03377 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SB48_HM08orf03378 PF00764 Arginosuccinate synthase SB48_HM08orf03379 PF00206 Lyase SB48_HM08orf03379 PF14698 Argininosuccinate lyase C-terminal SB48_HM08orf03381 PF00155 Aminotransferase class I and II SB48_HM08orf03385 PF07664 Ferrous iron transport protein B C terminus SB48_HM08orf03385 PF17910 FeoB cytosolic helical domain SB48_HM08orf03385 PF02421 Ferrous iron transport protein B SB48_HM08orf03385 PF07670 Nucleoside recognition SB48_HM08orf03389 PF01327 Polypeptide deformylase SB48_HM08orf03392 PF13411 MerR HTH family regulatory protein SB48_HM08orf03393 PF13529 Peptidase_C39 like family SB48_HM08orf03395 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SB48_HM08orf03399 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf03400 PF07849 Protein of unknown function (DUF1641) SB48_HM08orf03405 PF01472 PUA domain SB48_HM08orf03405 PF00696 Amino acid kinase family SB48_HM08orf03407 PF00171 Aldehyde dehydrogenase family SB48_HM08orf03408 PF03773 Predicted permease SB48_HM08orf03412 PF02769 AIR synthase related protein, C-terminal domain SB48_HM08orf03412 PF00586 AIR synthase related protein, N-terminal domain SB48_HM08orf03413 PF00581 Rhodanese-like domain SB48_HM08orf03416 PF01565 FAD binding domain SB48_HM08orf03416 PF02913 FAD linked oxidases, C-terminal domain SB48_HM08orf03421 PF13452 N-terminal half of MaoC dehydratase SB48_HM08orf03424 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SB48_HM08orf03424 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SB48_HM08orf03431 PF01565 FAD binding domain SB48_HM08orf03431 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SB48_HM08orf03435 PF00005 ABC transporter SB48_HM08orf03436 PF12679 ABC-2 family transporter protein SB48_HM08orf03439 PF00210 Ferritin-like domain SB48_HM08orf03442 PF01566 Natural resistance-associated macrophage protein SB48_HM08orf03445 PF00293 NUDIX domain SB48_HM08orf03448 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf03453 PF14139 YpzG-like protein SB48_HM08orf03459 PF00128 Alpha amylase, catalytic domain SB48_HM08orf03459 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SB48_HM08orf03459 PF02806 Alpha amylase, C-terminal all-beta domain SB48_HM08orf03460 PF00483 Nucleotidyl transferase SB48_HM08orf03460 PF00132 Bacterial transferase hexapeptide (six repeats) SB48_HM08orf03462 PF00483 Nucleotidyl transferase SB48_HM08orf03463 PF08323 Starch synthase catalytic domain SB48_HM08orf03463 PF00534 Glycosyl transferases group 1 SB48_HM08orf03467 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SB48_HM08orf03467 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SB48_HM08orf03468 PF03372 Endonuclease/Exonuclease/phosphatase family SB48_HM08orf03469 PF07486 Cell Wall Hydrolase SB48_HM08orf03470 PF07690 Major Facilitator Superfamily SB48_HM08orf03474 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SB48_HM08orf03474 PF00056 lactate/malate dehydrogenase, NAD binding domain SB48_HM08orf03481 PF04238 Protein of unknown function (DUF420) SB48_HM08orf03483 PF00576 HIUase/Transthyretin family SB48_HM08orf03485 PF13454 FAD-NAD(P)-binding SB48_HM08orf03486 PF01014 Uricase SB48_HM08orf03486 PF09349 OHCU decarboxylase SB48_HM08orf03487 PF00860 Permease family SB48_HM08orf03488 PF07905 Purine catabolism regulatory protein-like family SB48_HM08orf03488 PF17853 GGDEF-like domain SB48_HM08orf03488 PF13556 PucR C-terminal helix-turn-helix domain SB48_HM08orf03489 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf03491 PF00266 Aminotransferase class-V SB48_HM08orf03492 PF01348 Type II intron maturase SB48_HM08orf03492 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf03494 PF02334 Replication terminator protein SB48_HM08orf03497 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf03497 PF00501 AMP-binding enzyme SB48_HM08orf03498 PF02803 Thiolase, C-terminal domain SB48_HM08orf03498 PF00108 Thiolase, N-terminal domain SB48_HM08orf03500 PF00106 short chain dehydrogenase SB48_HM08orf03501 PF08141 Small acid-soluble spore protein H family SB48_HM08orf03502 PF01661 Macro domain SB48_HM08orf03507 PF00268 Ribonucleotide reductase, small chain SB48_HM08orf03515 PF12794 Mechanosensitive ion channel inner membrane domain 1 SB48_HM08orf03515 PF12795 Mechanosensitive ion channel porin domain SB48_HM08orf03515 PF00924 Mechanosensitive ion channel SB48_HM08orf03516 PF00158 Sigma-54 interaction domain SB48_HM08orf03516 PF01590 GAF domain SB48_HM08orf03516 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf03517 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SB48_HM08orf03517 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf03518 PF02817 e3 binding domain SB48_HM08orf03518 PF00364 Biotin-requiring enzyme SB48_HM08orf03518 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SB48_HM08orf03520 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf03520 PF02780 Transketolase, C-terminal domain SB48_HM08orf03521 PF00676 Dehydrogenase E1 component SB48_HM08orf03523 PF13536 Putative multidrug resistance efflux transporter SB48_HM08orf03525 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf03525 PF07687 Peptidase dimerisation domain SB48_HM08orf03528 PF13411 MerR HTH family regulatory protein SB48_HM08orf03528 PF07739 TipAS antibiotic-recognition domain SB48_HM08orf03530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SB48_HM08orf03530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SB48_HM08orf03532 PF00667 FAD binding domain SB48_HM08orf03532 PF00175 Oxidoreductase NAD-binding domain SB48_HM08orf03532 PF00258 Flavodoxin SB48_HM08orf03534 PF04029 2-phosphosulpholactate phosphatase SB48_HM08orf03535 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) SB48_HM08orf03538 PF09084 NMT1/THI5 like SB48_HM08orf03539 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf03542 PF07690 Major Facilitator Superfamily SB48_HM08orf03543 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf03543 PF17922 Tetracyclin repressor-like, C-terminal domain SB48_HM08orf03557 PF03473 MOSC domain SB48_HM08orf03557 PF03475 3-alpha domain SB48_HM08orf03561 PF02581 Thiamine monophosphate synthase SB48_HM08orf03563 PF08543 Phosphomethylpyrimidine kinase SB48_HM08orf03565 PF02110 Hydroxyethylthiazole kinase family SB48_HM08orf03569 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf03571 PF00583 Acetyltransferase (GNAT) family SB48_HM08orf03573 PF14171 Toxin SpoIISA, type II toxin-antitoxin system SB48_HM08orf03584 PF01209 ubiE/COQ5 methyltransferase family SB48_HM08orf03591 PF00180 Isocitrate/isopropylmalate dehydrogenase SB48_HM08orf03594 PF10502 Signal peptidase, peptidase S26 SB48_HM08orf03597 PF03060 Nitronate monooxygenase SB48_HM08orf03609 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SB48_HM08orf03609 PF02896 PEP-utilising enzyme, TIM barrel domain SB48_HM08orf03609 PF00391 PEP-utilising enzyme, mobile domain SB48_HM08orf03610 PF03618 Kinase/pyrophosphorylase SB48_HM08orf03617 PF03989 DNA gyrase C-terminal domain, beta-propeller SB48_HM08orf03617 PF00521 DNA gyrase/topoisomerase IV, subunit A SB48_HM08orf03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf03620 PF00204 DNA gyrase B SB48_HM08orf03620 PF00986 DNA gyrase B subunit, carboxyl terminus SB48_HM08orf03620 PF01751 Toprim domain SB48_HM08orf03623 PF13380 CoA binding domain SB48_HM08orf03626 PF02660 Glycerol-3-phosphate acyltransferase SB48_HM08orf03629 PF01521 Iron-sulphur cluster biosynthesis SB48_HM08orf03635 PF03061 Thioesterase superfamily SB48_HM08orf03638 PF08177 Small acid-soluble spore protein N family SB48_HM08orf03643 PF00330 Aconitase family (aconitate hydratase) SB48_HM08orf03643 PF00694 Aconitase C-terminal domain SB48_HM08orf03645 PF02073 Thermophilic metalloprotease (M29) SB48_HM08orf03648 PF08179 Small acid-soluble spore protein P family SB48_HM08orf03654 PF00501 AMP-binding enzyme SB48_HM08orf03654 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf03655 PF04172 LrgB-like family SB48_HM08orf03657 PF03788 LrgA family SB48_HM08orf03660 PF00664 ABC transporter transmembrane region SB48_HM08orf03660 PF00005 ABC transporter SB48_HM08orf03661 PF00664 ABC transporter transmembrane region SB48_HM08orf03661 PF00005 ABC transporter SB48_HM08orf03667 PF07690 Major Facilitator Superfamily SB48_HM08orf03673 PF13039 Protein of unknown function (DUF3900) SB48_HM08orf03673 PF13037 Domain of unknown function (DUF3898) SB48_HM08orf03675 PF00324 Amino acid permease SB48_HM08orf03678 PF04230 Polysaccharide pyruvyl transferase SB48_HM08orf03679 PF07690 Major Facilitator Superfamily SB48_HM08orf03683 PF00872 Transposase, Mutator family SB48_HM08orf03690 PF00072 Response regulator receiver domain SB48_HM08orf03690 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf03692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf03693 PF00005 ABC transporter SB48_HM08orf03694 PF02687 FtsX-like permease family SB48_HM08orf03700 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf03700 PF13192 Thioredoxin domain SB48_HM08orf03701 PF01227 GTP cyclohydrolase I SB48_HM08orf03703 PF00313 'Cold-shock' DNA-binding domain SB48_HM08orf03706 PF01625 Peptide methionine sulfoxide reductase SB48_HM08orf03709 PF03109 ABC1 family SB48_HM08orf03710 PF07690 Major Facilitator Superfamily SB48_HM08orf03713 PF08876 Domain of unknown function (DUF1836) SB48_HM08orf03716 PF02080 TrkA-C domain SB48_HM08orf03716 PF02254 TrkA-N domain SB48_HM08orf03717 PF02386 Cation transport protein SB48_HM08orf03720 PF00892 EamA-like transporter family SB48_HM08orf03724 PF04143 Sulphur transport SB48_HM08orf03727 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SB48_HM08orf03727 PF01502 Phosphoribosyl-AMP cyclohydrolase SB48_HM08orf03729 PF00977 Histidine biosynthesis protein SB48_HM08orf03731 PF00977 Histidine biosynthesis protein SB48_HM08orf03732 PF00117 Glutamine amidotransferase class-I SB48_HM08orf03734 PF00475 Imidazoleglycerol-phosphate dehydratase SB48_HM08orf03736 PF00815 Histidinol dehydrogenase SB48_HM08orf03739 PF01634 ATP phosphoribosyltransferase SB48_HM08orf03740 PF13393 Histidyl-tRNA synthetase SB48_HM08orf03742 PF01544 CorA-like Mg2+ transporter protein SB48_HM08orf03745 PF01810 LysE type translocator SB48_HM08orf03746 PF00324 Amino acid permease SB48_HM08orf03749 PF13342 C-terminal repeat of topoisomerase SB48_HM08orf03749 PF01131 DNA topoisomerase SB48_HM08orf03749 PF01396 Topoisomerase DNA binding C4 zinc finger SB48_HM08orf03749 PF01751 Toprim domain SB48_HM08orf03751 PF01476 LysM domain SB48_HM08orf03751 PF06725 3D domain SB48_HM08orf03752 PF00355 Rieske [2Fe-2S] domain SB48_HM08orf03752 PF01266 FAD dependent oxidoreductase SB48_HM08orf03753 PF00571 CBS domain SB48_HM08orf03753 PF00478 IMP dehydrogenase / GMP reductase domain SB48_HM08orf03754 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf03758 PF09515 Thiamine transporter protein (Thia_YuaJ) SB48_HM08orf03759 PF02586 SOS response associated peptidase (SRAP) SB48_HM08orf03765 PF12368 Rhodanase C-terminal SB48_HM08orf03765 PF00581 Rhodanese-like domain SB48_HM08orf03765 PF17773 UPF0176 acylphosphatase like domain SB48_HM08orf03767 PF01751 Toprim domain SB48_HM08orf03767 PF01131 DNA topoisomerase SB48_HM08orf03772 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SB48_HM08orf03772 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SB48_HM08orf03776 PF02096 60Kd inner membrane protein SB48_HM08orf03778 PF00171 Aldehyde dehydrogenase family SB48_HM08orf03779 PF00364 Biotin-requiring enzyme SB48_HM08orf03779 PF02817 e3 binding domain SB48_HM08orf03779 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SB48_HM08orf03781 PF16078 2-oxoglutarate dehydrogenase N-terminus SB48_HM08orf03781 PF16870 2-oxoglutarate dehydrogenase C-terminal SB48_HM08orf03781 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf03781 PF00676 Dehydrogenase E1 component SB48_HM08orf03786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf03786 PF18719 ArlS sensor domain SB48_HM08orf03786 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf03787 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf03787 PF00072 Response regulator receiver domain SB48_HM08orf03791 PF07690 Major Facilitator Superfamily SB48_HM08orf03792 PF03190 Protein of unknown function, DUF255 SB48_HM08orf03799 PF00884 Sulfatase SB48_HM08orf03802 PF01569 PAP2 superfamily SB48_HM08orf03805 PF02735 Ku70/Ku80 beta-barrel domain SB48_HM08orf03806 PF01068 ATP dependent DNA ligase domain SB48_HM08orf03808 PF01678 Diaminopimelate epimerase SB48_HM08orf03814 PF01554 MatE SB48_HM08orf03818 PF00188 Cysteine-rich secretory protein family SB48_HM08orf03822 PF01047 MarR family SB48_HM08orf03824 PF03572 Peptidase family S41 SB48_HM08orf03824 PF17820 PDZ domain SB48_HM08orf03824 PF01471 Putative peptidoglycan binding domain SB48_HM08orf03826 PF02557 D-alanyl-D-alanine carboxypeptidase SB48_HM08orf03832 PF14162 YozD-like protein SB48_HM08orf03836 PF06855 YozE SAM-like fold SB48_HM08orf03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf03840 PF00672 HAMP domain SB48_HM08orf03840 PF02743 Cache domain SB48_HM08orf03843 PF01641 SelR domain SB48_HM08orf03844 PF01625 Peptide methionine sulfoxide reductase SB48_HM08orf03846 PF01189 16S rRNA methyltransferase RsmB/F SB48_HM08orf03846 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SB48_HM08orf03846 PF17126 RsmF rRNA methyltransferase first C-terminal domain SB48_HM08orf03852 PF13472 GDSL-like Lipase/Acylhydrolase family SB48_HM08orf03853 PF03006 Haemolysin-III related SB48_HM08orf03854 PF00186 Dihydrofolate reductase SB48_HM08orf03855 PF00303 Thymidylate synthase SB48_HM08orf03858 PF14005 YpjP-like protein SB48_HM08orf03860 PF06491 Disulphide isomerase SB48_HM08orf03862 PF13769 Virulence factor SB48_HM08orf03862 PF08712 Scaffold protein Nfu/NifU N terminal SB48_HM08orf03864 PF12848 ABC transporter SB48_HM08orf03864 PF16326 ABC transporter C-terminal domain SB48_HM08orf03864 PF00005 ABC transporter SB48_HM08orf03865 PF01966 HD domain SB48_HM08orf03869 PF01268 Formate--tetrahydrofolate ligase SB48_HM08orf03871 PF02742 Iron dependent repressor, metal binding and dimerisation domain SB48_HM08orf03871 PF01325 Iron dependent repressor, N-terminal DNA binding domain SB48_HM08orf03872 PF00313 'Cold-shock' DNA-binding domain SB48_HM08orf03873 PF10782 Zinc-finger SB48_HM08orf03880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SB48_HM08orf03880 PF01367 5'-3' exonuclease, C-terminal SAM fold SB48_HM08orf03881 PF06838 Methionine gamma-lyase SB48_HM08orf03883 PF16360 GTP-binding GTPase Middle Region SB48_HM08orf03883 PF13167 GTP-binding GTPase N-terminal SB48_HM08orf03883 PF01926 50S ribosome-binding GTPase SB48_HM08orf03885 PF17866 AAA lid domain SB48_HM08orf03885 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf03890 PF17209 Hfq protein SB48_HM08orf03899 PF05901 Excalibur calcium-binding domain SB48_HM08orf03902 PF08676 MutL C terminal dimerisation domain SB48_HM08orf03902 PF01119 DNA mismatch repair protein, C-terminal domain SB48_HM08orf03904 PF05190 MutS family domain IV SB48_HM08orf03904 PF00488 MutS domain V SB48_HM08orf03904 PF05188 MutS domain II SB48_HM08orf03904 PF01624 MutS domain I SB48_HM08orf03904 PF05192 MutS domain III SB48_HM08orf03905 PF10628 Outer spore coat protein E (CotE) SB48_HM08orf03907 PF06133 Control of competence regulator ComK, YlbF/YmcA SB48_HM08orf03909 PF00919 Uncharacterized protein family UPF0004 SB48_HM08orf03909 PF01938 TRAM domain SB48_HM08orf03909 PF04055 Radical SAM superfamily SB48_HM08orf03915 PF00202 Aminotransferase class-III SB48_HM08orf03916 PF00171 Aldehyde dehydrogenase family SB48_HM08orf03922 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf03922 PF13188 PAS domain SB48_HM08orf03922 PF00158 Sigma-54 interaction domain SB48_HM08orf03924 PF00324 Amino acid permease SB48_HM08orf03927 PF01136 Peptidase family U32 SB48_HM08orf03927 PF16325 Peptidase family U32 C-terminal domain SB48_HM08orf03928 PF01136 Peptidase family U32 SB48_HM08orf03930 PF04232 Stage V sporulation protein S (SpoVS) SB48_HM08orf03934 PF13277 YmdB-like protein SB48_HM08orf03935 PF01966 HD domain SB48_HM08orf03935 PF00013 KH domain SB48_HM08orf03935 PF12072 Domain of unknown function (DUF3552) SB48_HM08orf03938 PF00154 recA bacterial DNA recombination protein SB48_HM08orf03940 PF00994 Probable molybdopterin binding domain SB48_HM08orf03940 PF18146 Damage-inducible protein CinA KH domain SB48_HM08orf03940 PF02464 Competence-damaged protein SB48_HM08orf03941 PF01066 CDP-alcohol phosphatidyltransferase SB48_HM08orf03942 PF13464 Domain of unknown function (DUF4115) SB48_HM08orf03943 PF11868 Protein of unknown function (DUF3388) SB48_HM08orf03945 PF11588 Protein of unknown function (DUF3243) SB48_HM08orf03949 PF00675 Insulinase (Peptidase family M16) SB48_HM08orf03949 PF05193 Peptidase M16 inactive domain SB48_HM08orf03950 PF05193 Peptidase M16 inactive domain SB48_HM08orf03952 PF02653 Branched-chain amino acid transport system / permease component SB48_HM08orf03954 PF02653 Branched-chain amino acid transport system / permease component SB48_HM08orf03956 PF00005 ABC transporter SB48_HM08orf03958 PF02608 ABC transporter substrate-binding protein PnrA-like SB48_HM08orf03960 PF17854 FtsK alpha domain SB48_HM08orf03960 PF09397 Ftsk gamma domain SB48_HM08orf03960 PF01580 FtsK/SpoIIIE family SB48_HM08orf03961 PF14035 YlzJ-like protein SB48_HM08orf03962 PF00574 Clp protease SB48_HM08orf03964 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf03964 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SB48_HM08orf03964 PF17770 Ribonuclease J C-terminal domain SB48_HM08orf03967 PF00701 Dihydrodipicolinate synthetase family SB48_HM08orf03968 PF00696 Amino acid kinase family SB48_HM08orf03968 PF13840 ACT domain SB48_HM08orf03971 PF01118 Semialdehyde dehydrogenase, NAD binding domain SB48_HM08orf03971 PF02774 Semialdehyde dehydrogenase, dimerisation domain SB48_HM08orf03974 PF02441 Flavoprotein SB48_HM08orf03975 PF16924 Dipicolinate synthase subunit A N-terminal domain SB48_HM08orf03975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SB48_HM08orf03976 PF05239 PRC-barrel domain SB48_HM08orf03979 PF05193 Peptidase M16 inactive domain SB48_HM08orf03979 PF00675 Insulinase (Peptidase family M16) SB48_HM08orf03981 PF01522 Polysaccharide deacetylase SB48_HM08orf03983 PF03725 3' exoribonuclease family, domain 2 SB48_HM08orf03983 PF00013 KH domain SB48_HM08orf03983 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SB48_HM08orf03983 PF01138 3' exoribonuclease family, domain 1 SB48_HM08orf03983 PF00575 S1 RNA binding domain SB48_HM08orf03984 PF00312 Ribosomal protein S15 SB48_HM08orf03986 PF06574 FAD synthetase SB48_HM08orf03986 PF01687 Riboflavin kinase SB48_HM08orf03989 PF16198 tRNA pseudouridylate synthase B C-terminal domain SB48_HM08orf03989 PF01509 TruB family pseudouridylate synthase (N terminal domain) SB48_HM08orf03991 PF02033 Ribosome-binding factor A SB48_HM08orf03992 PF04456 Protein of unknown function (DUF503) SB48_HM08orf03996 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf03996 PF04760 Translation initiation factor IF-2, N-terminal region SB48_HM08orf03996 PF11987 Translation-initiation factor 2 SB48_HM08orf03997 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SB48_HM08orf03999 PF04296 Protein of unknown function (DUF448) SB48_HM08orf04001 PF13184 NusA-like KH domain SB48_HM08orf04001 PF08529 NusA N-terminal domain SB48_HM08orf04001 PF00575 S1 RNA binding domain SB48_HM08orf04002 PF02576 RimP N-terminal domain SB48_HM08orf04002 PF17384 RimP C-terminal SH3 domain SB48_HM08orf04004 PF07733 Bacterial DNA polymerase III alpha NTPase domain SB48_HM08orf04004 PF14579 Helix-hairpin-helix motif SB48_HM08orf04004 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SB48_HM08orf04004 PF14480 DNA polymerase III polC-type N-terminus I SB48_HM08orf04004 PF11490 DNA polymerase III polC-type N-terminus II SB48_HM08orf04004 PF02811 PHP domain SB48_HM08orf04004 PF00929 Exonuclease SB48_HM08orf04008 PF04073 Aminoacyl-tRNA editing domain SB48_HM08orf04008 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SB48_HM08orf04008 PF03129 Anticodon binding domain SB48_HM08orf04011 PF13180 PDZ domain SB48_HM08orf04011 PF02163 Peptidase family M50 SB48_HM08orf04013 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SB48_HM08orf04013 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SB48_HM08orf04013 PF13288 DXP reductoisomerase C-terminal domain SB48_HM08orf04017 PF01255 Putative undecaprenyl diphosphate synthase SB48_HM08orf04023 PF01765 Ribosome recycling factor SB48_HM08orf04024 PF00696 Amino acid kinase family SB48_HM08orf04026 PF00889 Elongation factor TS SB48_HM08orf04028 PF00318 Ribosomal protein S2 SB48_HM08orf04033 PF04545 Sigma-70, region 4 SB48_HM08orf04033 PF04539 Sigma-70 region 3 SB48_HM08orf04033 PF04542 Sigma-70 region 2 SB48_HM08orf04036 PF03975 CheD chemotactic sensory transduction SB48_HM08orf04037 PF04509 CheC-like family SB48_HM08orf04038 PF01584 CheW-like domain SB48_HM08orf04041 PF02895 Signal transducing histidine kinase, homodimeric domain SB48_HM08orf04041 PF01584 CheW-like domain SB48_HM08orf04041 PF01627 Hpt domain SB48_HM08orf04041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf04041 PF07194 P2 response regulator binding domain SB48_HM08orf04042 PF01339 CheB methylesterase SB48_HM08orf04042 PF00072 Response regulator receiver domain SB48_HM08orf04045 PF10609 NUBPL iron-transfer P-loop NTPase SB48_HM08orf04046 PF00448 SRP54-type protein, GTPase domain SB48_HM08orf04048 PF00771 FHIPEP family SB48_HM08orf04049 PF01312 FlhB HrpN YscU SpaS Family SB48_HM08orf04051 PF01311 Bacterial export proteins, family 1 SB48_HM08orf04052 PF01313 Bacterial export proteins, family 3 SB48_HM08orf04053 PF00813 FliP family SB48_HM08orf04055 PF04347 Flagellar biosynthesis protein, FliO SB48_HM08orf04056 PF00072 Response regulator receiver domain SB48_HM08orf04058 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SB48_HM08orf04058 PF04509 CheC-like family SB48_HM08orf04059 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SB48_HM08orf04059 PF02154 Flagellar motor switch protein FliM SB48_HM08orf04061 PF03748 Flagellar basal body-associated protein FliL SB48_HM08orf04063 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SB48_HM08orf04063 PF00460 Flagella basal body rod protein SB48_HM08orf04068 PF03963 Flagellar hook capping protein - N-terminal region SB48_HM08orf04074 PF02050 Flagellar FliJ protein SB48_HM08orf04076 PF18269 T3SS EscN ATPase C-terminal domain SB48_HM08orf04076 PF02874 ATP synthase alpha/beta family, beta-barrel domain SB48_HM08orf04076 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SB48_HM08orf04077 PF02108 Flagellar assembly protein FliH SB48_HM08orf04078 PF01609 Transposase DDE domain SB48_HM08orf04079 PF01706 FliG C-terminal domain SB48_HM08orf04079 PF14841 FliG middle domain SB48_HM08orf04079 PF14842 FliG N-terminal domain SB48_HM08orf04082 PF01514 Secretory protein of YscJ/FliF family SB48_HM08orf04082 PF08345 Flagellar M-ring protein C-terminal SB48_HM08orf04084 PF02049 Flagellar hook-basal body complex protein FliE SB48_HM08orf04085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SB48_HM08orf04085 PF00460 Flagella basal body rod protein SB48_HM08orf04087 PF00460 Flagella basal body rod protein SB48_HM08orf04088 PF01609 Transposase DDE domain SB48_HM08orf04089 PF06018 CodY GAF-like domain SB48_HM08orf04089 PF08222 CodY helix-turn-helix domain SB48_HM08orf04091 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf04091 PF07724 AAA domain (Cdc48 subfamily) SB48_HM08orf04091 PF10431 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04093 PF00227 Proteasome subunit SB48_HM08orf04095 PF00589 Phage integrase family SB48_HM08orf04095 PF02899 Phage integrase, N-terminal SAM-like domain SB48_HM08orf04105 PF01131 DNA topoisomerase SB48_HM08orf04105 PF01751 Toprim domain SB48_HM08orf04105 PF01396 Topoisomerase DNA binding C4 zinc finger SB48_HM08orf04106 PF02481 DNA recombination-mediator protein A SB48_HM08orf04108 PF00549 CoA-ligase SB48_HM08orf04108 PF02629 CoA binding domain SB48_HM08orf04109 PF00549 CoA-ligase SB48_HM08orf04109 PF08442 ATP-grasp domain SB48_HM08orf04111 PF01312 FlhB HrpN YscU SpaS Family SB48_HM08orf04115 PF01351 Ribonuclease HII SB48_HM08orf04116 PF01926 50S ribosome-binding GTPase SB48_HM08orf04119 PF10502 Signal peptidase, peptidase S26 SB48_HM08orf04121 PF01245 Ribosomal protein L19 SB48_HM08orf04124 PF01746 tRNA (Guanine-1)-methyltransferase SB48_HM08orf04125 PF05239 PRC-barrel domain SB48_HM08orf04125 PF01782 RimM N-terminal domain SB48_HM08orf04127 PF11068 YlqD protein SB48_HM08orf04130 PF00886 Ribosomal protein S16 SB48_HM08orf04131 PF02881 SRP54-type protein, helical bundle domain SB48_HM08orf04131 PF02978 Signal peptide binding domain SB48_HM08orf04131 PF00448 SRP54-type protein, GTPase domain SB48_HM08orf04134 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SB48_HM08orf04137 PF00448 SRP54-type protein, GTPase domain SB48_HM08orf04137 PF02881 SRP54-type protein, helical bundle domain SB48_HM08orf04138 PF06470 SMC proteins Flexible Hinge Domain SB48_HM08orf04138 PF02463 RecF/RecN/SMC N terminal domain SB48_HM08orf04139 PF00035 Double-stranded RNA binding motif SB48_HM08orf04139 PF14622 Ribonuclease-III-like SB48_HM08orf04140 PF00550 Phosphopantetheine attachment site SB48_HM08orf04143 PF00698 Acyl transferase domain SB48_HM08orf04144 PF02504 Fatty acid synthesis protein SB48_HM08orf04145 PF01575 MaoC like domain SB48_HM08orf04145 PF08279 HTH domain SB48_HM08orf04147 PF00270 DEAD/DEAH box helicase SB48_HM08orf04147 PF00271 Helicase conserved C-terminal domain SB48_HM08orf04147 PF17191 RecG wedge domain SB48_HM08orf04149 PF03313 Serine dehydratase alpha chain SB48_HM08orf04151 PF03315 Serine dehydratase beta chain SB48_HM08orf04151 PF01842 ACT domain SB48_HM08orf04154 PF13684 Dihydroxyacetone kinase family SB48_HM08orf04154 PF02734 DAK2 domain SB48_HM08orf04155 PF03780 Asp23 family, cell envelope-related function SB48_HM08orf04158 PF08183 Stage V sporulation protein family SB48_HM08orf04159 PF04263 Thiamin pyrophosphokinase, catalytic domain SB48_HM08orf04159 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SB48_HM08orf04161 PF00834 Ribulose-phosphate 3 epimerase family SB48_HM08orf04163 PF16745 RsgA N-terminal domain SB48_HM08orf04163 PF03193 RsgA GTPase SB48_HM08orf04164 PF03793 PASTA domain SB48_HM08orf04164 PF00069 Protein kinase domain SB48_HM08orf04167 PF01029 NusB family SB48_HM08orf04167 PF01189 16S rRNA methyltransferase RsmB/F SB48_HM08orf04169 PF00551 Formyl transferase SB48_HM08orf04169 PF02911 Formyl transferase, C-terminal domain SB48_HM08orf04170 PF01327 Polypeptide deformylase SB48_HM08orf04172 PF17764 3′ DNA-binding domain (3′BD) SB48_HM08orf04172 PF18074 Primosomal protein N C-terminal domain SB48_HM08orf04172 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SB48_HM08orf04172 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf04172 PF00271 Helicase conserved C-terminal domain SB48_HM08orf04174 PF02441 Flavoprotein SB48_HM08orf04174 PF04127 DNA / pantothenate metabolism flavoprotein SB48_HM08orf04176 PF01192 RNA polymerase Rpb6 SB48_HM08orf04177 PF00625 Guanylate kinase SB48_HM08orf04178 PF04025 Domain of unknown function (DUF370) SB48_HM08orf04179 PF08340 Domain of unknown function (DUF1732) SB48_HM08orf04179 PF03755 YicC-like family, N-terminal region SB48_HM08orf04182 PF00690 Cation transporter/ATPase, N-terminus SB48_HM08orf04182 PF00689 Cation transporting ATPase, C-terminus SB48_HM08orf04183 PF05670 NFACT protein RNA binding domain SB48_HM08orf04186 PF01758 Sodium Bile acid symporter family SB48_HM08orf04190 PF04055 Radical SAM superfamily SB48_HM08orf04191 PF01242 6-pyruvoyl tetrahydropterin synthase SB48_HM08orf04211 PF01594 AI-2E family transporter SB48_HM08orf04213 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf04215 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf04217 PF00005 ABC transporter SB48_HM08orf04219 PF00893 Small Multidrug Resistance protein SB48_HM08orf04220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SB48_HM08orf04221 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf04222 PF07690 Major Facilitator Superfamily SB48_HM08orf04223 PF07690 Major Facilitator Superfamily SB48_HM08orf04224 PF01812 5-formyltetrahydrofolate cyclo-ligase family SB48_HM08orf04228 PF02142 MGS-like domain SB48_HM08orf04232 PF00596 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf04234 PF06134 L-rhamnose isomerase (RhaA) SB48_HM08orf04236 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf04236 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf04237 PF02311 AraC-like ligand binding domain SB48_HM08orf04237 PF12833 Helix-turn-helix domain SB48_HM08orf04249 PF00156 Phosphoribosyl transferase domain SB48_HM08orf04250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SB48_HM08orf04251 PF01180 Dihydroorotate dehydrogenase SB48_HM08orf04252 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SB48_HM08orf04252 PF00970 Oxidoreductase FAD-binding domain SB48_HM08orf04254 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SB48_HM08orf04254 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SB48_HM08orf04254 PF02142 MGS-like domain SB48_HM08orf04255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SB48_HM08orf04255 PF00117 Glutamine amidotransferase class-I SB48_HM08orf04257 PF01979 Amidohydrolase family SB48_HM08orf04259 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SB48_HM08orf04259 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SB48_HM08orf04261 PF01348 Type II intron maturase SB48_HM08orf04261 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf04262 PF00156 Phosphoribosyl transferase domain SB48_HM08orf04265 PF00849 RNA pseudouridylate synthase SB48_HM08orf04265 PF01479 S4 domain SB48_HM08orf04267 PF01252 Signal peptidase (SPase) II SB48_HM08orf04272 PF08264 Anticodon-binding domain of tRNA SB48_HM08orf04272 PF00133 tRNA synthetases class I (I, L, M and V) SB48_HM08orf04272 PF06827 Zinc finger found in FPG and IleRS SB48_HM08orf04273 PF05103 DivIVA protein SB48_HM08orf04274 PF17774 Putative RNA-binding domain in YlmH SB48_HM08orf04274 PF01479 S4 domain SB48_HM08orf04275 PF02325 YGGT family SB48_HM08orf04277 PF04472 Cell division protein SepF SB48_HM08orf04278 PF01168 Alanine racemase, N-terminal domain SB48_HM08orf04279 PF02578 Multi-copper polyphenol oxidoreductase laccase SB48_HM08orf04280 PF06725 3D domain SB48_HM08orf04280 PF01476 LysM domain SB48_HM08orf04281 PF05239 PRC-barrel domain SB48_HM08orf04282 PF04539 Sigma-70 region 3 SB48_HM08orf04282 PF04545 Sigma-70, region 4 SB48_HM08orf04282 PF04542 Sigma-70 region 2 SB48_HM08orf04284 PF04545 Sigma-70, region 4 SB48_HM08orf04284 PF04542 Sigma-70 region 2 SB48_HM08orf04287 PF03419 Sporulation factor SpoIIGA SB48_HM08orf04289 PF00091 Tubulin/FtsZ family, GTPase domain SB48_HM08orf04289 PF12327 FtsZ family, C-terminal domain SB48_HM08orf04292 PF02491 SHS2 domain inserted in FTSA SB48_HM08orf04296 PF08478 POTRA domain, FtsQ-type SB48_HM08orf04298 PF04101 Glycosyltransferase family 28 C-terminal domain SB48_HM08orf04298 PF03033 Glycosyltransferase family 28 N-terminal domain SB48_HM08orf04299 PF01098 Cell cycle protein SB48_HM08orf04301 PF08245 Mur ligase middle domain SB48_HM08orf04301 PF02875 Mur ligase family, glutamate ligase domain SB48_HM08orf04302 PF00953 Glycosyl transferase family 4 SB48_HM08orf04302 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SB48_HM08orf04306 PF02875 Mur ligase family, glutamate ligase domain SB48_HM08orf04306 PF01225 Mur ligase family, catalytic domain SB48_HM08orf04306 PF08245 Mur ligase middle domain SB48_HM08orf04309 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf04309 PF03793 PASTA domain SB48_HM08orf04309 PF03717 Penicillin-binding Protein dimerisation domain SB48_HM08orf04310 PF03793 PASTA domain SB48_HM08orf04310 PF03717 Penicillin-binding Protein dimerisation domain SB48_HM08orf04310 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf04313 PF04977 Septum formation initiator SB48_HM08orf04314 PF01795 MraW methylase family SB48_HM08orf04316 PF02381 MraZ protein, putative antitoxin-like SB48_HM08orf04322 PF10079 Bacillithiol biosynthesis BshC SB48_HM08orf04324 PF02558 Ketopantoate reductase PanE/ApbA SB48_HM08orf04324 PF08546 Ketopantoate reductase PanE/ApbA C terminal SB48_HM08orf04326 PF13508 Acetyltransferase (GNAT) domain SB48_HM08orf04329 PF01783 Ribosomal L32p protein family SB48_HM08orf04330 PF02620 Large ribosomal RNA subunit accumulation protein YceD SB48_HM08orf04332 PF05636 HIGH Nucleotidyl Transferase SB48_HM08orf04338 PF13180 PDZ domain SB48_HM08orf04338 PF05362 Lon protease (S16) C-terminal proteolytic domain SB48_HM08orf04339 PF01734 Patatin-like phospholipase SB48_HM08orf04341 PF07670 Nucleoside recognition SB48_HM08orf04345 PF01467 Cytidylyltransferase-like SB48_HM08orf04352 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SB48_HM08orf04354 PF06133 Control of competence regulator ComK, YlbF/YmcA SB48_HM08orf04360 PF14003 YlbE-like protein SB48_HM08orf04364 PF03061 Thioesterase superfamily SB48_HM08orf04366 PF14504 CAP-associated N-terminal SB48_HM08orf04366 PF00188 Cysteine-rich secretory protein family SB48_HM08orf04368 PF08868 YugN-like family SB48_HM08orf04370 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) SB48_HM08orf04371 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SB48_HM08orf04373 PF00510 Cytochrome c oxidase subunit III SB48_HM08orf04374 PF00115 Cytochrome C and Quinol oxidase polypeptide I SB48_HM08orf04376 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SB48_HM08orf04376 PF00034 Cytochrome c SB48_HM08orf04376 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SB48_HM08orf04377 PF01040 UbiA prenyltransferase family SB48_HM08orf04379 PF02628 Cytochrome oxidase assembly protein SB48_HM08orf04380 PF01098 Cell cycle protein SB48_HM08orf04381 PF07408 Protein of unknown function (DUF1507) SB48_HM08orf04384 PF13638 PIN domain SB48_HM08orf04384 PF02562 PhoH-like protein SB48_HM08orf04387 PF14036 YlaH-like protein SB48_HM08orf04390 PF14492 Elongation Factor G, domain II SB48_HM08orf04390 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf04390 PF03144 Elongation factor Tu domain 2 SB48_HM08orf04390 PF00679 Elongation factor G C-terminus SB48_HM08orf04392 PF00459 Inositol monophosphatase family SB48_HM08orf04395 PF06335 Protein of unknown function (DUF1054) SB48_HM08orf04397 PF05256 Uncharacterised protein family (UPF0223) SB48_HM08orf04400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SB48_HM08orf04400 PF01276 Orn/Lys/Arg decarboxylase, major domain SB48_HM08orf04405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SB48_HM08orf04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf04407 PF02817 e3 binding domain SB48_HM08orf04407 PF00364 Biotin-requiring enzyme SB48_HM08orf04407 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SB48_HM08orf04408 PF02779 Transketolase, pyrimidine binding domain SB48_HM08orf04408 PF02780 Transketolase, C-terminal domain SB48_HM08orf04410 PF00676 Dehydrogenase E1 component SB48_HM08orf04414 PF07288 Protein of unknown function (DUF1447) SB48_HM08orf04415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SB48_HM08orf04415 PF17770 Ribonuclease J C-terminal domain SB48_HM08orf04415 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf04422 PF07687 Peptidase dimerisation domain SB48_HM08orf04422 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf04423 PF00132 Bacterial transferase hexapeptide (six repeats) SB48_HM08orf04423 PF14602 Hexapeptide repeat of succinyl-transferase SB48_HM08orf04423 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SB48_HM08orf04425 PF03466 LysR substrate binding domain SB48_HM08orf04425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf04429 PF08796 Protein of unknown function (DUF1797) SB48_HM08orf04445 PF03176 MMPL family SB48_HM08orf04447 PF14177 YkyB-like protein SB48_HM08orf04449 PF01584 CheW-like domain SB48_HM08orf04449 PF00072 Response regulator receiver domain SB48_HM08orf04452 PF00155 Aminotransferase class I and II SB48_HM08orf04457 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SB48_HM08orf04457 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SB48_HM08orf04462 PF02896 PEP-utilising enzyme, TIM barrel domain SB48_HM08orf04462 PF00391 PEP-utilising enzyme, mobile domain SB48_HM08orf04462 PF05524 PEP-utilising enzyme, N-terminal SB48_HM08orf04463 PF00381 PTS HPr component phosphorylation site SB48_HM08orf04469 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SB48_HM08orf04477 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf04477 PF17871 AAA lid domain SB48_HM08orf04477 PF07724 AAA domain (Cdc48 subfamily) SB48_HM08orf04477 PF10431 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04482 PF09388 Spo0E like sporulation regulatory protein SB48_HM08orf04487 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SB48_HM08orf04487 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SB48_HM08orf04493 PF13426 PAS domain SB48_HM08orf04493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf04493 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf04493 PF00989 PAS fold SB48_HM08orf04493 PF13188 PAS domain SB48_HM08orf04500 PF00269 Small, acid-soluble spore proteins, alpha/beta type SB48_HM08orf04504 PF03741 Integral membrane protein TerC family SB48_HM08orf04508 PF01348 Type II intron maturase SB48_HM08orf04508 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf04510 PF03144 Elongation factor Tu domain 2 SB48_HM08orf04510 PF16658 Class II release factor RF3, C-terminal domain SB48_HM08orf04510 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf04512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf04512 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf04512 PF00989 PAS fold SB48_HM08orf04514 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SB48_HM08orf04514 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SB48_HM08orf04519 PF00210 Ferritin-like domain SB48_HM08orf04523 PF01925 Sulfite exporter TauE/SafE SB48_HM08orf04525 PF00970 Oxidoreductase FAD-binding domain SB48_HM08orf04525 PF00042 Globin SB48_HM08orf04525 PF00175 Oxidoreductase NAD-binding domain SB48_HM08orf04527 PF02082 Transcriptional regulator SB48_HM08orf04541 PF07690 Major Facilitator Superfamily SB48_HM08orf04546 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SB48_HM08orf04546 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SB48_HM08orf04556 PF01580 FtsK/SpoIIIE family SB48_HM08orf04556 PF12538 DNA transporter SB48_HM08orf04558 PF13419 Haloacid dehalogenase-like hydrolase SB48_HM08orf04559 PF03636 Glycosyl hydrolase family 65, N-terminal domain SB48_HM08orf04559 PF03632 Glycosyl hydrolase family 65 central catalytic domain SB48_HM08orf04559 PF03633 Glycosyl hydrolase family 65, C-terminal domain SB48_HM08orf04563 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf04573 PF06013 Proteins of 100 residues with WXG SB48_HM08orf04575 PF01717 Cobalamin-independent synthase, Catalytic domain SB48_HM08orf04577 PF00871 Acetokinase family SB48_HM08orf04582 PF12833 Helix-turn-helix domain SB48_HM08orf04582 PF10114 Sensory domain found in PocR SB48_HM08orf04587 PF13404 AsnC-type helix-turn-helix domain SB48_HM08orf04587 PF01037 Lrp/AsnC ligand binding domain SB48_HM08orf04588 PF02417 Chromate transporter SB48_HM08orf04591 PF02417 Chromate transporter SB48_HM08orf04592 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf04594 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf04594 PF00501 AMP-binding enzyme SB48_HM08orf04598 PF08774 VRR-NUC domain SB48_HM08orf04598 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf04600 PF01555 DNA methylase SB48_HM08orf04600 PF18273 Type III R-M EcoP15I C-terminal domain SB48_HM08orf04609 PF01432 Peptidase family M3 SB48_HM08orf04609 PF08439 Oligopeptidase F SB48_HM08orf04612 PF03051 Peptidase C1-like family SB48_HM08orf04620 PF13732 Domain of unknown function (DUF4162) SB48_HM08orf04620 PF00005 ABC transporter SB48_HM08orf04626 PF00480 ROK family SB48_HM08orf04647 PF00756 Putative esterase SB48_HM08orf04649 PF13673 Acetyltransferase (GNAT) domain SB48_HM08orf04654 PF14069 Stage VI sporulation protein F SB48_HM08orf04665 PF00872 Transposase, Mutator family SB48_HM08orf04669 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SB48_HM08orf04671 PF07451 Stage V sporulation protein AD (SpoVAD) SB48_HM08orf04673 PF03862 SpoVAC/SpoVAEB sporulation membrane protein SB48_HM08orf04678 PF07098 Protein of unknown function (DUF1360) SB48_HM08orf04688 PF00149 Calcineurin-like phosphoesterase SB48_HM08orf04693 PF00849 RNA pseudouridylate synthase SB48_HM08orf04694 PF01513 ATP-NAD kinase SB48_HM08orf04697 PF04607 Region found in RelA / SpoT proteins SB48_HM08orf04702 PF01464 Transglycosylase SLT domain SB48_HM08orf04709 PF00872 Transposase, Mutator family SB48_HM08orf04710 PF00872 Transposase, Mutator family SB48_HM08orf04723 PF01152 Bacterial-like globin SB48_HM08orf04732 PF01432 Peptidase family M3 SB48_HM08orf04732 PF08439 Oligopeptidase F SB48_HM08orf04733 PF06054 Competence protein CoiA-like family SB48_HM08orf04736 PF05389 Negative regulator of genetic competence (MecA) SB48_HM08orf04740 PF03960 ArsC family SB48_HM08orf04742 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf04742 PF00005 ABC transporter SB48_HM08orf04743 PF00005 ABC transporter SB48_HM08orf04743 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf04744 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf04744 PF12911 N-terminal TM domain of oligopeptide transport permease C SB48_HM08orf04745 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf04746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SB48_HM08orf04752 PF00579 tRNA synthetases class I (W and Y) SB48_HM08orf04754 PF12227 Protein of unknown function (DUF3603) SB48_HM08orf04756 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SB48_HM08orf04758 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf04760 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf04761 PF00005 ABC transporter SB48_HM08orf04761 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf04762 PF00005 ABC transporter SB48_HM08orf04762 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SB48_HM08orf04769 PF00109 Beta-ketoacyl synthase, N-terminal domain SB48_HM08orf04769 PF02801 Beta-ketoacyl synthase, C-terminal domain SB48_HM08orf04772 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SB48_HM08orf04772 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SB48_HM08orf04783 PF02861 Clp amino terminal domain, pathogenicity island component SB48_HM08orf04783 PF10431 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04783 PF17871 AAA lid domain SB48_HM08orf04783 PF07724 AAA domain (Cdc48 subfamily) SB48_HM08orf04783 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf04785 PF14168 YjzC-like protein SB48_HM08orf04786 PF01883 Iron-sulfur cluster assembly protein SB48_HM08orf04792 PF12758 Protein of unknown function (DUF3813) SB48_HM08orf04797 PF02645 Uncharacterised protein, DegV family COG1307 SB48_HM08orf04802 PF07457 Protein of unknown function (DUF1516) SB48_HM08orf04804 PF01557 Fumarylacetoacetate (FAA) hydrolase family SB48_HM08orf04806 PF04235 Protein of unknown function (DUF418) SB48_HM08orf04807 PF10676 Spore germination protein gerPA/gerPF SB48_HM08orf04813 PF10737 Spore germination protein GerPC SB48_HM08orf04816 PF10676 Spore germination protein gerPA/gerPF SB48_HM08orf04818 PF13361 UvrD-like helicase C-terminal domain SB48_HM08orf04818 PF00580 UvrD/REP helicase N-terminal domain SB48_HM08orf04818 PF12705 PD-(D/E)XK nuclease superfamily SB48_HM08orf04820 PF12705 PD-(D/E)XK nuclease superfamily SB48_HM08orf04831 PF16491 CAAX prenyl protease N-terminal, five membrane helices SB48_HM08orf04831 PF01435 Peptidase family M48 SB48_HM08orf04833 PF03591 AzlC protein SB48_HM08orf04836 PF00501 AMP-binding enzyme SB48_HM08orf04836 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf04838 PF10437 Bacterial lipoate protein ligase C-terminus SB48_HM08orf04838 PF03099 Biotin/lipoate A/B protein ligase family SB48_HM08orf04839 PF14149 YhfH-like protein SB48_HM08orf04843 PF02630 SCO1/SenC SB48_HM08orf04845 PF00171 Aldehyde dehydrogenase family SB48_HM08orf04848 PF00892 EamA-like transporter family SB48_HM08orf04850 PF07690 Major Facilitator Superfamily SB48_HM08orf04852 PF05336 L-rhamnose mutarotase SB48_HM08orf04854 PF08220 DeoR-like helix-turn-helix domain SB48_HM08orf04854 PF00455 DeoR C terminal sensor domain SB48_HM08orf04855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf04855 PF00367 phosphotransferase system, EIIB SB48_HM08orf04855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf04855 PF02378 Phosphotransferase system, EIIC SB48_HM08orf04855 PF00367 phosphotransferase system, EIIB SB48_HM08orf04855 PF02378 Phosphotransferase system, EIIC SB48_HM08orf04857 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf04857 PF17932 Tetracyclin repressor-like, C-terminal domain SB48_HM08orf04861 PF01593 Flavin containing amine oxidoreductase SB48_HM08orf04863 PF00762 Ferrochelatase SB48_HM08orf04864 PF01208 Uroporphyrinogen decarboxylase (URO-D) SB48_HM08orf04868 PF03992 Antibiotic biosynthesis monooxygenase SB48_HM08orf04873 PF07687 Peptidase dimerisation domain SB48_HM08orf04873 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf04878 PF05975 Bacterial ABC transporter protein EcsB SB48_HM08orf04879 PF00005 ABC transporter SB48_HM08orf04881 PF01230 HIT domain SB48_HM08orf04883 PF17099 Tryptophan transporter TrpP SB48_HM08orf04889 PF01047 MarR family SB48_HM08orf04890 PF08963 Protein of unknown function (DUF1878) SB48_HM08orf04895 PF05698 Bacterial trigger factor protein (TF) C-terminus SB48_HM08orf04897 PF14147 Sporulation protein YhaL SB48_HM08orf04898 PF01966 HD domain SB48_HM08orf04899 PF13514 AAA domain SB48_HM08orf04901 PF00149 Calcineurin-like phosphoesterase SB48_HM08orf04902 PF09323 Domain of unknown function (DUF1980) SB48_HM08orf04904 PF03773 Predicted permease SB48_HM08orf04907 PF03741 Integral membrane protein TerC family SB48_HM08orf04909 PF14120 YhzD-like protein SB48_HM08orf04911 PF00378 Enoyl-CoA hydratase/isomerase SB48_HM08orf04914 PF06133 Control of competence regulator ComK, YlbF/YmcA SB48_HM08orf04916 PF04286 Protein of unknown function (DUF445) SB48_HM08orf04920 PF14398 YheC/D like ATP-grasp SB48_HM08orf04921 PF14398 YheC/D like ATP-grasp SB48_HM08orf04924 PF13556 PucR C-terminal helix-turn-helix domain SB48_HM08orf04926 PF00005 ABC transporter SB48_HM08orf04926 PF03459 TOBE domain SB48_HM08orf04926 PF17912 MalK OB fold domain SB48_HM08orf04928 PF00269 Small, acid-soluble spore proteins, alpha/beta type SB48_HM08orf04929 PF00206 Lyase SB48_HM08orf04929 PF10415 Fumarase C C-terminus SB48_HM08orf04938 PF00574 Clp protease SB48_HM08orf04940 PF00381 PTS HPr component phosphorylation site SB48_HM08orf04942 PF10298 WhiA N-terminal LAGLIDADG-like domain SB48_HM08orf04942 PF14527 WhiA LAGLIDADG-like domain SB48_HM08orf04942 PF02650 WhiA C-terminal HTH domain SB48_HM08orf04944 PF01933 Uncharacterised protein family UPF0052 SB48_HM08orf04947 PF03668 P-loop ATPase protein family SB48_HM08orf04948 PF00293 NUDIX domain SB48_HM08orf04954 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf04959 PF14602 Hexapeptide repeat of succinyl-transferase SB48_HM08orf04961 PF13419 Haloacid dehalogenase-like hydrolase SB48_HM08orf04966 PF01790 Prolipoprotein diacylglyceryl transferase SB48_HM08orf04968 PF07475 HPr Serine kinase C-terminal domain SB48_HM08orf04968 PF02603 HPr Serine kinase N terminus SB48_HM08orf04972 PF13349 Putative adhesin SB48_HM08orf04976 PF00535 Glycosyl transferase family 2 SB48_HM08orf04976 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SB48_HM08orf04978 PF01061 ABC-2 type transporter SB48_HM08orf04980 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SB48_HM08orf04984 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SB48_HM08orf04986 PF01467 Cytidylyltransferase-like SB48_HM08orf04990 PF17760 UvrA interaction domain SB48_HM08orf04990 PF00005 ABC transporter SB48_HM08orf04990 PF17755 UvrA DNA-binding domain SB48_HM08orf04992 PF12344 Ultra-violet resistance protein B SB48_HM08orf04992 PF02151 UvrB/uvrC motif SB48_HM08orf04992 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf04992 PF00271 Helicase conserved C-terminal domain SB48_HM08orf04992 PF17757 UvrB interaction domain SB48_HM08orf05008 PF00535 Glycosyl transferase family 2 SB48_HM08orf05011 PF00005 ABC transporter SB48_HM08orf05013 PF00005 ABC transporter SB48_HM08orf05016 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05017 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05025 PF12849 PBP superfamily domain SB48_HM08orf05028 PF01593 Flavin containing amine oxidoreductase SB48_HM08orf05034 PF00989 PAS fold SB48_HM08orf05034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf05034 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf05034 PF16736 Single Cache-like SB48_HM08orf05035 PF00486 Transcriptional regulatory protein, C terminal SB48_HM08orf05035 PF00072 Response regulator receiver domain SB48_HM08orf05041 PF00037 4Fe-4S binding domain SB48_HM08orf05042 PF01497 Periplasmic binding protein SB48_HM08orf05043 PF00005 ABC transporter SB48_HM08orf05044 PF01032 FecCD transport family SB48_HM08orf05045 PF01032 FecCD transport family SB48_HM08orf05050 PF17820 PDZ domain SB48_HM08orf05051 PF00872 Transposase, Mutator family SB48_HM08orf05054 PF01471 Putative peptidoglycan binding domain SB48_HM08orf05054 PF03572 Peptidase family S41 SB48_HM08orf05054 PF17820 PDZ domain SB48_HM08orf05056 PF00742 Homoserine dehydrogenase SB48_HM08orf05056 PF03447 Homoserine dehydrogenase, NAD binding domain SB48_HM08orf05056 PF01842 ACT domain SB48_HM08orf05057 PF01053 Cys/Met metabolism PLP-dependent enzyme SB48_HM08orf05059 PF13396 Phospholipase_D-nuclease N-terminal SB48_HM08orf05059 PF13091 PLD-like domain SB48_HM08orf05062 PF04225 Opacity-associated protein A LysM-like domain SB48_HM08orf05062 PF01551 Peptidase family M23 SB48_HM08orf05063 PF02687 FtsX-like permease family SB48_HM08orf05063 PF18075 FtsX extracellular domain SB48_HM08orf05065 PF00005 ABC transporter SB48_HM08orf05067 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SB48_HM08orf05068 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SB48_HM08orf05068 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SB48_HM08orf05070 PF00472 RF-1 domain SB48_HM08orf05070 PF03462 PCRF domain SB48_HM08orf05071 PF03462 PCRF domain SB48_HM08orf05071 PF00472 RF-1 domain SB48_HM08orf05074 PF07517 SecA DEAD-like domain SB48_HM08orf05074 PF01043 SecA preprotein cross-linking domain SB48_HM08orf05074 PF02810 SEC-C motif SB48_HM08orf05074 PF07516 SecA Wing and Scaffold domain SB48_HM08orf05083 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SB48_HM08orf05083 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SB48_HM08orf05085 PF02561 Flagellar protein FliS SB48_HM08orf05086 PF07195 Flagellar hook-associated protein 2 C-terminus SB48_HM08orf05086 PF02465 Flagellar hook-associated protein 2 N-terminus SB48_HM08orf05088 PF03646 FlaG protein SB48_HM08orf05096 PF02245 Methylpurine-DNA glycosylase (MPG) SB48_HM08orf05101 PF01609 Transposase DDE domain SB48_HM08orf05102 PF05362 Lon protease (S16) C-terminal proteolytic domain SB48_HM08orf05102 PF13654 AAA domain SB48_HM08orf05106 PF00324 Amino acid permease SB48_HM08orf05111 PF00324 Amino acid permease SB48_HM08orf05112 PF00083 Sugar (and other) transporter SB48_HM08orf05115 PF13344 Haloacid dehalogenase-like hydrolase SB48_HM08orf05116 PF02308 MgtC family SB48_HM08orf05118 PF04309 Glycerol-3-phosphate responsive antiterminator SB48_HM08orf05119 PF00669 Bacterial flagellin N-terminal helical region SB48_HM08orf05119 PF00700 Bacterial flagellin C-terminal helical region SB48_HM08orf05120 PF02810 SEC-C motif SB48_HM08orf05120 PF07517 SecA DEAD-like domain SB48_HM08orf05120 PF01043 SecA preprotein cross-linking domain SB48_HM08orf05120 PF07516 SecA Wing and Scaffold domain SB48_HM08orf05122 PF02599 Global regulator protein family SB48_HM08orf05123 PF02623 FliW protein SB48_HM08orf05125 PF00700 Bacterial flagellin C-terminal helical region SB48_HM08orf05125 PF00669 Bacterial flagellin N-terminal helical region SB48_HM08orf05127 PF00460 Flagella basal body rod protein SB48_HM08orf05127 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SB48_HM08orf05131 PF04316 Anti-sigma-28 factor, FlgM SB48_HM08orf05134 PF00156 Phosphoribosyl transferase domain SB48_HM08orf05138 PF00271 Helicase conserved C-terminal domain SB48_HM08orf05138 PF04851 Type III restriction enzyme, res subunit SB48_HM08orf05141 PF02645 Uncharacterised protein, DegV family COG1307 SB48_HM08orf05143 PF13520 Amino acid permease SB48_HM08orf05148 PF00196 Bacterial regulatory proteins, luxR family SB48_HM08orf05148 PF00072 Response regulator receiver domain SB48_HM08orf05149 PF07730 Histidine kinase SB48_HM08orf05149 PF05384 Sensor protein DegS SB48_HM08orf05149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf05150 PF01205 Uncharacterized protein family UPF0029 SB48_HM08orf05150 PF09186 Domain of unknown function (DUF1949) SB48_HM08orf05153 PF00953 Glycosyl transferase family 4 SB48_HM08orf05157 PF00905 Penicillin binding protein transpeptidase domain SB48_HM08orf05157 PF05223 NTF2-like N-terminal transpeptidase domain SB48_HM08orf05157 PF03717 Penicillin-binding Protein dimerisation domain SB48_HM08orf05158 PF13426 PAS domain SB48_HM08orf05158 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf05158 PF08447 PAS fold SB48_HM08orf05161 PF00877 NlpC/P60 family SB48_HM08orf05161 PF01476 LysM domain SB48_HM08orf05163 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf05163 PF07702 UTRA domain SB48_HM08orf05165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SB48_HM08orf05166 PF01979 Amidohydrolase family SB48_HM08orf05168 PF07690 Major Facilitator Superfamily SB48_HM08orf05172 PF04204 Homoserine O-succinyltransferase SB48_HM08orf05175 PF01238 Phosphomannose isomerase type I SB48_HM08orf05184 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SB48_HM08orf05185 PF17783 CvfB-like winged helix domain SB48_HM08orf05185 PF13509 S1 domain SB48_HM08orf05195 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf05196 PF01263 Aldose 1-epimerase SB48_HM08orf05200 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SB48_HM08orf05200 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SB48_HM08orf05202 PF16363 GDP-mannose 4,6 dehydratase SB48_HM08orf05203 PF10509 Galactokinase galactose-binding signature SB48_HM08orf05203 PF08544 GHMP kinases C terminal SB48_HM08orf05203 PF00288 GHMP kinases N terminal domain SB48_HM08orf05208 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf05208 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf05208 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf05210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf05210 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf05210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf05213 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SB48_HM08orf05215 PF03176 MMPL family SB48_HM08orf05219 PF07690 Major Facilitator Superfamily SB48_HM08orf05220 PF00324 Amino acid permease SB48_HM08orf05221 PF00202 Aminotransferase class-III SB48_HM08orf05227 PF03611 PTS system sugar-specific permease component SB48_HM08orf05229 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf05235 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SB48_HM08orf05236 PF01979 Amidohydrolase family SB48_HM08orf05242 PF03070 TENA/THI-4/PQQC family SB48_HM08orf05246 PF12146 Serine aminopeptidase, S33 SB48_HM08orf05249 PF01209 ubiE/COQ5 methyltransferase family SB48_HM08orf05250 PF13847 Methyltransferase domain SB48_HM08orf05250 PF05958 tRNA (Uracil-5-)-methyltransferase SB48_HM08orf05250 PF01938 TRAM domain SB48_HM08orf05252 PF00550 Phosphopantetheine attachment site SB48_HM08orf05253 PF16874 Glycosyl hydrolase family 36 C-terminal domain SB48_HM08orf05253 PF16875 Glycosyl hydrolase family 36 N-terminal domain SB48_HM08orf05254 PF03737 Aldolase/RraA SB48_HM08orf05257 PF00155 Aminotransferase class I and II SB48_HM08orf05258 PF13171 Protein of unknown function (DUF4004) SB48_HM08orf05268 PF01554 MatE SB48_HM08orf05269 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SB48_HM08orf05269 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf05270 PF13514 AAA domain SB48_HM08orf05271 PF00149 Calcineurin-like phosphoesterase SB48_HM08orf05273 PF03358 NADPH-dependent FMN reductase SB48_HM08orf05277 PF00248 Aldo/keto reductase family SB48_HM08orf05278 PF07859 alpha/beta hydrolase fold SB48_HM08orf05282 PF00248 Aldo/keto reductase family SB48_HM08orf05288 PF12146 Serine aminopeptidase, S33 SB48_HM08orf05295 PF01380 SIS domain SB48_HM08orf05296 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf05296 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SB48_HM08orf05303 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf05303 PF00107 Zinc-binding dehydrogenase SB48_HM08orf05306 PF00931 NB-ARC domain SB48_HM08orf05306 PF13176 Tetratricopeptide repeat SB48_HM08orf05309 PF04055 Radical SAM superfamily SB48_HM08orf05309 PF08756 YfkB-like domain SB48_HM08orf05316 PF00582 Universal stress protein family SB48_HM08orf05317 PF01943 Polysaccharide biosynthesis protein SB48_HM08orf05318 PF02522 Aminoglycoside 3-N-acetyltransferase SB48_HM08orf05321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf05321 PF18158 Adaptive response protein AidB N-terminal domain SB48_HM08orf05321 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf05322 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf05322 PF00501 AMP-binding enzyme SB48_HM08orf05323 PF00376 MerR family regulatory protein SB48_HM08orf05323 PF09278 MerR, DNA binding SB48_HM08orf05328 PF02632 BioY family SB48_HM08orf05332 PF00557 Metallopeptidase family M24 SB48_HM08orf05334 PF01476 LysM domain SB48_HM08orf05334 PF00877 NlpC/P60 family SB48_HM08orf05340 PF00270 DEAD/DEAH box helicase SB48_HM08orf05340 PF00271 Helicase conserved C-terminal domain SB48_HM08orf05344 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf05344 PF00171 Aldehyde dehydrogenase family SB48_HM08orf05351 PF00474 Sodium:solute symporter family SB48_HM08orf05358 PF00483 Nucleotidyl transferase SB48_HM08orf05360 PF01256 Carbohydrate kinase SB48_HM08orf05365 PF00491 Arginase family SB48_HM08orf05367 PF00742 Homoserine dehydrogenase SB48_HM08orf05367 PF03447 Homoserine dehydrogenase, NAD binding domain SB48_HM08orf05367 PF01842 ACT domain SB48_HM08orf05368 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf05369 PF00288 GHMP kinases N terminal domain SB48_HM08orf05369 PF08544 GHMP kinases C terminal SB48_HM08orf05371 PF00005 ABC transporter SB48_HM08orf05373 PF09084 NMT1/THI5 like SB48_HM08orf05375 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05376 PF01910 Thiamine-binding protein SB48_HM08orf05377 PF01425 Amidase SB48_HM08orf05381 PF03972 MmgE/PrpD family SB48_HM08orf05382 PF00285 Citrate synthase, C-terminal domain SB48_HM08orf05390 PF03613 PTS system mannose/fructose/sorbose family IID component SB48_HM08orf05391 PF03609 PTS system sorbose-specific iic component SB48_HM08orf05392 PF03610 PTS system fructose IIA component SB48_HM08orf05392 PF03830 PTS system sorbose subfamily IIB component SB48_HM08orf05393 PF03830 PTS system sorbose subfamily IIB component SB48_HM08orf05393 PF03610 PTS system fructose IIA component SB48_HM08orf05396 PF00874 PRD domain SB48_HM08orf05396 PF03610 PTS system fructose IIA component SB48_HM08orf05396 PF00158 Sigma-54 interaction domain SB48_HM08orf05402 PF10282 Lactonase, 7-bladed beta-propeller SB48_HM08orf05406 PF01910 Thiamine-binding protein SB48_HM08orf05410 PF01061 ABC-2 type transporter SB48_HM08orf05411 PF04607 Region found in RelA / SpoT proteins SB48_HM08orf05411 PF13291 ACT domain SB48_HM08orf05411 PF02824 TGS domain SB48_HM08orf05413 PF06725 3D domain SB48_HM08orf05413 PF01476 LysM domain SB48_HM08orf05417 PF00056 lactate/malate dehydrogenase, NAD binding domain SB48_HM08orf05417 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SB48_HM08orf05421 PF00311 Phosphoenolpyruvate carboxylase SB48_HM08orf05423 PF00872 Transposase, Mutator family SB48_HM08orf05425 PF02687 FtsX-like permease family SB48_HM08orf05425 PF12704 MacB-like periplasmic core domain SB48_HM08orf05425 PF00005 ABC transporter SB48_HM08orf05426 PF03816 Cell envelope-related transcriptional attenuator domain SB48_HM08orf05427 PF13419 Haloacid dehalogenase-like hydrolase SB48_HM08orf05429 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SB48_HM08orf05430 PF00115 Cytochrome C and Quinol oxidase polypeptide I SB48_HM08orf05431 PF00510 Cytochrome c oxidase subunit III SB48_HM08orf05432 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SB48_HM08orf05440 PF08239 Bacterial SH3 domain SB48_HM08orf05440 PF00005 ABC transporter SB48_HM08orf05450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SB48_HM08orf05450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SB48_HM08orf05450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SB48_HM08orf05450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SB48_HM08orf05451 PF01545 Cation efflux family SB48_HM08orf05451 PF16916 Dimerisation domain of Zinc Transporter SB48_HM08orf05452 PF00107 Zinc-binding dehydrogenase SB48_HM08orf05452 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf05456 PF03808 Glycosyl transferase WecB/TagA/CpsF family SB48_HM08orf05459 PF12833 Helix-turn-helix domain SB48_HM08orf05459 PF17853 GGDEF-like domain SB48_HM08orf05460 PF01547 Bacterial extracellular solute-binding protein SB48_HM08orf05461 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05462 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05464 PF03632 Glycosyl hydrolase family 65 central catalytic domain SB48_HM08orf05464 PF03633 Glycosyl hydrolase family 65, C-terminal domain SB48_HM08orf05464 PF03636 Glycosyl hydrolase family 65, N-terminal domain SB48_HM08orf05469 PF01053 Cys/Met metabolism PLP-dependent enzyme SB48_HM08orf05470 PF01053 Cys/Met metabolism PLP-dependent enzyme SB48_HM08orf05474 PF00005 ABC transporter SB48_HM08orf05476 PF00571 CBS domain SB48_HM08orf05476 PF01380 SIS domain SB48_HM08orf05477 PF00793 DAHP synthetase I family SB48_HM08orf05480 PF08279 HTH domain SB48_HM08orf05480 PF00874 PRD domain SB48_HM08orf05480 PF05043 Mga helix-turn-helix domain SB48_HM08orf05480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf05481 PF00232 Glycosyl hydrolase family 1 SB48_HM08orf05482 PF02378 Phosphotransferase system, EIIC SB48_HM08orf05482 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf05484 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf05488 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SB48_HM08orf05490 PF10710 Protein of unknown function (DUF2512) SB48_HM08orf05492 PF10460 Peptidase M30 SB48_HM08orf05509 PF03816 Cell envelope-related transcriptional attenuator domain SB48_HM08orf05518 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf05518 PF00155 Aminotransferase class I and II SB48_HM08orf05520 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf05520 PF07729 FCD domain SB48_HM08orf05521 PF02652 L-lactate permease SB48_HM08orf05523 PF00324 Amino acid permease SB48_HM08orf05527 PF12431 Transcriptional regulator SB48_HM08orf05527 PF00072 Response regulator receiver domain SB48_HM08orf05528 PF00672 HAMP domain SB48_HM08orf05528 PF02743 Cache domain SB48_HM08orf05528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf05528 PF06580 Histidine kinase SB48_HM08orf05540 PF05343 M42 glutamyl aminopeptidase SB48_HM08orf05544 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SB48_HM08orf05544 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf05546 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf05548 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf05548 PF00501 AMP-binding enzyme SB48_HM08orf05555 PF16338 Domain of unknown function (DUF4968) SB48_HM08orf05555 PF13802 Galactose mutarotase-like SB48_HM08orf05555 PF17137 Domain of unknown function (DUF5110) SB48_HM08orf05555 PF01055 Glycosyl hydrolases family 31 SB48_HM08orf05558 PF00989 PAS fold SB48_HM08orf05558 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf05558 PF00158 Sigma-54 interaction domain SB48_HM08orf05559 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf05563 PF00171 Aldehyde dehydrogenase family SB48_HM08orf05575 PF00005 ABC transporter SB48_HM08orf05575 PF12558 ATP-binding cassette cobalt transporter SB48_HM08orf05577 PF00672 HAMP domain SB48_HM08orf05577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf05580 PF01226 Formate/nitrite transporter SB48_HM08orf05584 PF00266 Aminotransferase class-V SB48_HM08orf05585 PF02910 Fumarate reductase flavoprotein C-term SB48_HM08orf05585 PF00890 FAD binding domain SB48_HM08orf05586 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SB48_HM08orf05586 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SB48_HM08orf05587 PF02445 Quinolinate synthetase A protein SB48_HM08orf05588 PF00480 ROK family SB48_HM08orf05589 PF01261 Xylose isomerase-like TIM barrel SB48_HM08orf05591 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf05591 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf05592 PF00083 Sugar (and other) transporter SB48_HM08orf05594 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf05602 PF01078 Magnesium chelatase, subunit ChlI SB48_HM08orf05602 PF13335 Magnesium chelatase, subunit ChlI C-terminal SB48_HM08orf05605 PF00135 Carboxylesterase family SB48_HM08orf05609 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SB48_HM08orf05609 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SB48_HM08orf05610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SB48_HM08orf05610 PF01348 Type II intron maturase SB48_HM08orf05611 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf05611 PF16123 Hydroxyacylglutathione hydrolase C-terminus SB48_HM08orf05624 PF00106 short chain dehydrogenase SB48_HM08orf05626 PF14602 Hexapeptide repeat of succinyl-transferase SB48_HM08orf05626 PF12464 Maltose acetyltransferase SB48_HM08orf05628 PF12802 MarR family SB48_HM08orf05630 PF00005 ABC transporter SB48_HM08orf05630 PF00571 CBS domain SB48_HM08orf05632 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05633 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SB48_HM08orf05634 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05635 PF08533 Beta-galactosidase C-terminal domain SB48_HM08orf05635 PF02449 Beta-galactosidase SB48_HM08orf05635 PF08532 Beta-galactosidase trimerisation domain SB48_HM08orf05638 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf05640 PF07690 Major Facilitator Superfamily SB48_HM08orf05642 PF01370 NAD dependent epimerase/dehydratase family SB48_HM08orf05643 PF00155 Aminotransferase class I and II SB48_HM08orf05648 PF00324 Amino acid permease SB48_HM08orf05651 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf05652 PF02378 Phosphotransferase system, EIIC SB48_HM08orf05655 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SB48_HM08orf05657 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf05659 PF00874 PRD domain SB48_HM08orf05659 PF08279 HTH domain SB48_HM08orf05659 PF05043 Mga helix-turn-helix domain SB48_HM08orf05659 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf05663 PF00107 Zinc-binding dehydrogenase SB48_HM08orf05663 PF16884 N-terminal domain of oxidoreductase SB48_HM08orf05667 PF02515 CoA-transferase family III SB48_HM08orf05668 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf05668 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf05668 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf05677 PF00248 Aldo/keto reductase family SB48_HM08orf05680 PF03816 Cell envelope-related transcriptional attenuator domain SB48_HM08orf05682 PF13520 Amino acid permease SB48_HM08orf05686 PF07745 Glycosyl hydrolase family 53 SB48_HM08orf05688 PF13567 Domain of unknown function (DUF4131) SB48_HM08orf05688 PF03772 Competence protein SB48_HM08orf05688 PF00753 Metallo-beta-lactamase superfamily SB48_HM08orf05695 PF04237 YjbR SB48_HM08orf05696 PF03060 Nitronate monooxygenase SB48_HM08orf05697 PF05378 Hydantoinase/oxoprolinase N-terminal region SB48_HM08orf05697 PF01968 Hydantoinase/oxoprolinase SB48_HM08orf05699 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SB48_HM08orf05705 PF02954 Bacterial regulatory protein, Fis family SB48_HM08orf05705 PF13426 PAS domain SB48_HM08orf05705 PF00158 Sigma-54 interaction domain SB48_HM08orf05707 PF00596 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf05709 PF00294 pfkB family carbohydrate kinase SB48_HM08orf05712 PF03611 PTS system sugar-specific permease component SB48_HM08orf05713 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf05718 PF03613 PTS system mannose/fructose/sorbose family IID component SB48_HM08orf05719 PF03609 PTS system sorbose-specific iic component SB48_HM08orf05720 PF03830 PTS system sorbose subfamily IIB component SB48_HM08orf05720 PF03610 PTS system fructose IIA component SB48_HM08orf05722 PF03610 PTS system fructose IIA component SB48_HM08orf05722 PF00874 PRD domain SB48_HM08orf05722 PF00158 Sigma-54 interaction domain SB48_HM08orf05724 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SB48_HM08orf05726 PF02538 Hydantoinase B/oxoprolinase SB48_HM08orf05727 PF01968 Hydantoinase/oxoprolinase SB48_HM08orf05727 PF05378 Hydantoinase/oxoprolinase N-terminal region SB48_HM08orf05728 PF01381 Helix-turn-helix SB48_HM08orf05731 PF07702 UTRA domain SB48_HM08orf05731 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf05733 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SB48_HM08orf05737 PF03830 PTS system sorbose subfamily IIB component SB48_HM08orf05738 PF03609 PTS system sorbose-specific iic component SB48_HM08orf05739 PF03613 PTS system mannose/fructose/sorbose family IID component SB48_HM08orf05747 PF01555 DNA methylase SB48_HM08orf05754 PF08241 Methyltransferase domain SB48_HM08orf05755 PF10026 Predicted Zn-dependent protease (DUF2268) SB48_HM08orf05762 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase SB48_HM08orf05767 PF08239 Bacterial SH3 domain SB48_HM08orf05767 PF05036 Sporulation related domain SB48_HM08orf05767 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SB48_HM08orf05780 PF08240 Alcohol dehydrogenase GroES-like domain SB48_HM08orf05780 PF13823 Alcohol dehydrogenase GroES-associated SB48_HM08orf05780 PF00107 Zinc-binding dehydrogenase SB48_HM08orf05784 PF00480 ROK family SB48_HM08orf05787 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf05787 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf05795 PF10460 Peptidase M30 SB48_HM08orf05796 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf05796 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf05798 PF01261 Xylose isomerase-like TIM barrel SB48_HM08orf05801 PF01055 Glycosyl hydrolases family 31 SB48_HM08orf05801 PF13802 Galactose mutarotase-like SB48_HM08orf05803 PF00480 ROK family SB48_HM08orf05808 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SB48_HM08orf05808 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SB48_HM08orf05808 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SB48_HM08orf05809 PF00483 Nucleotidyl transferase SB48_HM08orf05809 PF01050 Mannose-6-phosphate isomerase SB48_HM08orf05816 PF02397 Bacterial sugar transferase SB48_HM08orf05817 PF00483 Nucleotidyl transferase SB48_HM08orf05819 PF13614 AAA domain SB48_HM08orf05820 PF02706 Chain length determinant protein SB48_HM08orf05820 PF13807 G-rich domain on putative tyrosine kinase SB48_HM08orf05834 PF00809 Pterin binding enzyme SB48_HM08orf05834 PF02574 Homocysteine S-methyltransferase SB48_HM08orf05834 PF02607 B12 binding domain SB48_HM08orf05834 PF02965 Vitamin B12 dependent methionine synthase, activation domain SB48_HM08orf05834 PF02310 B12 binding domain SB48_HM08orf05835 PF02574 Homocysteine S-methyltransferase SB48_HM08orf05835 PF02219 Methylenetetrahydrofolate reductase SB48_HM08orf05842 PF03816 Cell envelope-related transcriptional attenuator domain SB48_HM08orf05845 PF09335 SNARE associated Golgi protein SB48_HM08orf05846 PF09335 SNARE associated Golgi protein SB48_HM08orf05852 PF01638 HxlR-like helix-turn-helix SB48_HM08orf05857 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05858 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05860 PF00497 Bacterial extracellular solute-binding proteins, family 3 SB48_HM08orf05866 PF00005 ABC transporter SB48_HM08orf05867 PF01594 AI-2E family transporter SB48_HM08orf05872 PF02416 mttA/Hcf106 family SB48_HM08orf05874 PF02673 Bacitracin resistance protein BacA SB48_HM08orf05877 PF13520 Amino acid permease SB48_HM08orf05882 PF03129 Anticodon binding domain SB48_HM08orf05882 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SB48_HM08orf05885 PF01966 HD domain SB48_HM08orf05885 PF11871 Domain of unknown function (DUF3391) SB48_HM08orf05895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SB48_HM08orf05898 PF04264 YceI-like domain SB48_HM08orf05900 PF04405 Domain of Unknown function (DUF542) SB48_HM08orf05900 PF01814 Hemerythrin HHE cation binding domain SB48_HM08orf05909 PF00027 Cyclic nucleotide-binding domain SB48_HM08orf05909 PF13545 Crp-like helix-turn-helix domain SB48_HM08orf05910 PF00375 Sodium:dicarboxylate symporter family SB48_HM08orf05913 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SB48_HM08orf05913 PF01266 FAD dependent oxidoreductase SB48_HM08orf05914 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf05914 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf05915 PF00230 Major intrinsic protein SB48_HM08orf05917 PF04309 Glycerol-3-phosphate responsive antiterminator SB48_HM08orf05921 PF13538 UvrD-like helicase C-terminal domain SB48_HM08orf05923 PF00535 Glycosyl transferase family 2 SB48_HM08orf05925 PF03600 Citrate transporter SB48_HM08orf05927 PF00072 Response regulator receiver domain SB48_HM08orf05927 PF08279 HTH domain SB48_HM08orf05927 PF12431 Transcriptional regulator SB48_HM08orf05929 PF17203 Single cache domain 3 SB48_HM08orf05929 PF00989 PAS fold SB48_HM08orf05929 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SB48_HM08orf05929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf05932 PF00909 Ammonium Transporter Family SB48_HM08orf05935 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf05938 PF13520 Amino acid permease SB48_HM08orf05941 PF01979 Amidohydrolase family SB48_HM08orf05942 PF01180 Dihydroorotate dehydrogenase SB48_HM08orf05943 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SB48_HM08orf05943 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf05944 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SB48_HM08orf05946 PF01546 Peptidase family M20/M25/M40 SB48_HM08orf05946 PF07687 Peptidase dimerisation domain SB48_HM08orf05947 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf05949 PF00202 Aminotransferase class-III SB48_HM08orf05952 PF02754 Cysteine-rich domain SB48_HM08orf05953 PF11870 Domain of unknown function (DUF3390) SB48_HM08orf05953 PF13183 4Fe-4S dicluster domain SB48_HM08orf05953 PF02589 LUD domain SB48_HM08orf05957 PF02589 LUD domain SB48_HM08orf05958 PF13520 Amino acid permease SB48_HM08orf05960 PF00872 Transposase, Mutator family SB48_HM08orf05967 PF00872 Transposase, Mutator family SB48_HM08orf05977 PF00872 Transposase, Mutator family SB48_HM08orf05980 PF13416 Bacterial extracellular solute-binding protein SB48_HM08orf05981 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05982 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf05983 PF08402 TOBE domain SB48_HM08orf05983 PF00005 ABC transporter SB48_HM08orf05986 PF00324 Amino acid permease SB48_HM08orf05987 PF00854 POT family SB48_HM08orf05989 PF00324 Amino acid permease SB48_HM08orf05993 PF00248 Aldo/keto reductase family SB48_HM08orf05995 PF07875 Coat F domain SB48_HM08orf06000 PF01380 SIS domain SB48_HM08orf06003 PF07690 Major Facilitator Superfamily SB48_HM08orf06004 PF00294 pfkB family carbohydrate kinase SB48_HM08orf06007 PF00356 Bacterial regulatory proteins, lacI family SB48_HM08orf06011 PF05167 Uncharacterised ACR (DUF711) SB48_HM08orf06018 PF02627 Carboxymuconolactone decarboxylase family SB48_HM08orf06020 PF00155 Aminotransferase class I and II SB48_HM08orf06026 PF08125 Mannitol dehydrogenase C-terminal domain SB48_HM08orf06026 PF01232 Mannitol dehydrogenase Rossmann domain SB48_HM08orf06028 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf06028 PF00874 PRD domain SB48_HM08orf06028 PF05043 Mga helix-turn-helix domain SB48_HM08orf06028 PF08279 HTH domain SB48_HM08orf06028 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf06029 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SB48_HM08orf06029 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SB48_HM08orf06029 PF02378 Phosphotransferase system, EIIC SB48_HM08orf06034 PF13460 NAD(P)H-binding SB48_HM08orf06038 PF00288 GHMP kinases N terminal domain SB48_HM08orf06038 PF08544 GHMP kinases C terminal SB48_HM08orf06047 PF10509 Galactokinase galactose-binding signature SB48_HM08orf06047 PF08544 GHMP kinases C terminal SB48_HM08orf06047 PF00288 GHMP kinases N terminal domain SB48_HM08orf06055 PF01380 SIS domain SB48_HM08orf06056 PF01545 Cation efflux family SB48_HM08orf06061 PF00892 EamA-like transporter family SB48_HM08orf06067 PF00990 Diguanylate cyclase, GGDEF domain SB48_HM08orf06067 PF00072 Response regulator receiver domain SB48_HM08orf06072 PF13193 AMP-binding enzyme C-terminal domain SB48_HM08orf06072 PF00501 AMP-binding enzyme SB48_HM08orf06074 PF00465 Iron-containing alcohol dehydrogenase SB48_HM08orf06077 PF04073 Aminoacyl-tRNA editing domain SB48_HM08orf06079 PF14824 Sirohaem biosynthesis protein central SB48_HM08orf06084 PF01903 CbiX SB48_HM08orf06085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SB48_HM08orf06087 PF01507 Phosphoadenosine phosphosulfate reductase family SB48_HM08orf06088 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain SB48_HM08orf06088 PF12708 Pectate lyase superfamily protein SB48_HM08orf06099 PF00171 Aldehyde dehydrogenase family SB48_HM08orf06106 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf06111 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SB48_HM08orf06111 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SB48_HM08orf06111 PF02770 Acyl-CoA dehydrogenase, middle domain SB48_HM08orf06113 PF01740 STAS domain SB48_HM08orf06113 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain SB48_HM08orf06114 PF01709 Transcriptional regulator SB48_HM08orf06124 PF07992 Pyridine nucleotide-disulphide oxidoreductase SB48_HM08orf06126 PF00005 ABC transporter SB48_HM08orf06129 PF01497 Periplasmic binding protein SB48_HM08orf06130 PF01032 FecCD transport family SB48_HM08orf06131 PF01032 FecCD transport family SB48_HM08orf06134 PF00893 Small Multidrug Resistance protein SB48_HM08orf06135 PF00893 Small Multidrug Resistance protein SB48_HM08orf06136 PF00892 EamA-like transporter family SB48_HM08orf06148 PF00535 Glycosyl transferase family 2 SB48_HM08orf06150 PF02660 Glycerol-3-phosphate acyltransferase SB48_HM08orf06152 PF00268 Ribonucleotide reductase, small chain SB48_HM08orf06154 PF02867 Ribonucleotide reductase, barrel domain SB48_HM08orf06154 PF03477 ATP cone domain SB48_HM08orf06154 PF00317 Ribonucleotide reductase, all-alpha domain SB48_HM08orf06157 PF00872 Transposase, Mutator family SB48_HM08orf06159 PF00403 Heavy-metal-associated domain SB48_HM08orf06160 PF00403 Heavy-metal-associated domain SB48_HM08orf06162 PF00027 Cyclic nucleotide-binding domain SB48_HM08orf06162 PF13545 Crp-like helix-turn-helix domain SB48_HM08orf06164 PF00672 HAMP domain SB48_HM08orf06164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf06164 PF18698 Histidine kinase sensor domain SB48_HM08orf06164 PF00512 His Kinase A (phospho-acceptor) domain SB48_HM08orf06166 PF01541 GIY-YIG catalytic domain SB48_HM08orf06166 PF02151 UvrB/uvrC motif SB48_HM08orf06166 PF08459 UvrC Helix-hairpin-helix N-terminal SB48_HM08orf06169 PF00258 Flavodoxin SB48_HM08orf06172 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SB48_HM08orf06172 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SB48_HM08orf06175 PF07729 FCD domain SB48_HM08orf06175 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf06179 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SB48_HM08orf06179 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SB48_HM08orf06183 PF02447 GntP family permease SB48_HM08orf06185 PF00392 Bacterial regulatory proteins, gntR family SB48_HM08orf06185 PF07702 UTRA domain SB48_HM08orf06187 PF00128 Alpha amylase, catalytic domain SB48_HM08orf06187 PF16657 Maltogenic Amylase, C-terminal domain SB48_HM08orf06189 PF02378 Phosphotransferase system, EIIC SB48_HM08orf06189 PF00367 phosphotransferase system, EIIB SB48_HM08orf06190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SB48_HM08orf06193 PF00528 Binding-protein-dependent transport system inner membrane component SB48_HM08orf06194 PF00571 CBS domain SB48_HM08orf06194 PF00005 ABC transporter SB48_HM08orf06197 PF00872 Transposase, Mutator family SB48_HM08orf06201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SB48_HM08orf06201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SB48_HM08orf06207 PF02803 Thiolase, C-terminal domain SB48_HM08orf06207 PF00108 Thiolase, N-terminal domain SB48_HM08orf06214 PF10997 Alternate to MurJ SB48_HM08orf06216 PF07690 Major Facilitator Superfamily SB48_HM08orf06221 PF00293 NUDIX domain SB48_HM08orf06225 PF00958 GMP synthase C terminal domain SB48_HM08orf06225 PF13673 Acetyltransferase (GNAT) domain SB48_HM08orf06225 PF00117 Glutamine amidotransferase class-I SB48_HM08orf06225 PF03352 Methyladenine glycosylase SB48_HM08orf06225 PF13302 Acetyltransferase (GNAT) domain SB48_HM08orf06231 PF07690 Major Facilitator Superfamily SB48_HM08orf06234 PF00296 Luciferase-like monooxygenase SB48_HM08orf06235 PF11514 Protein of unknown function (DUF3219) SB48_HM08orf06246 PF00440 Bacterial regulatory proteins, tetR family SB48_HM08orf06247 PF00857 Isochorismatase family SB48_HM08orf06250 PF07690 Major Facilitator Superfamily SB48_HM08orf06253 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf06253 PF00672 HAMP domain SB48_HM08orf06253 PF02743 Cache domain SB48_HM08orf06256 PF03551 Transcriptional regulator PadR-like family SB48_HM08orf06260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SB48_HM08orf06261 PF02146 Sir2 family SB48_HM08orf06263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SB48_HM08orf06263 PF03466 LysR substrate binding domain SB48_HM08orf06264 PF07690 Major Facilitator Superfamily SB48_HM08orf06287 PF01380 SIS domain SB48_HM08orf06292 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SB48_HM08orf06292 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SB48_HM08orf06292 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SB48_HM08orf06292 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SB48_HM08orf06294 PF07949 YbbR-like protein SB48_HM08orf06295 PF02457 DisA bacterial checkpoint controller nucleotide-binding SB48_HM08orf06296 PF13490 Putative zinc-finger SB48_HM08orf06297 PF08281 Sigma-70, region 4 SB48_HM08orf06297 PF04542 Sigma-70 region 2 SB48_HM08orf06301 PF00491 Arginase family SB48_HM08orf06302 PF01476 LysM domain SB48_HM08orf06302 PF05257 CHAP domain SB48_HM08orf06344 PF00772 DnaB-like helicase N terminal domain SB48_HM08orf06344 PF03796 DnaB-like helicase C terminal domain SB48_HM08orf06345 PF07261 Replication initiation and membrane attachment SB48_HM08orf06345 PF14297 Domain of unknown function (DUF4373) SB48_HM08orf06347 PF03837 RecT family SB48_HM08orf06348 PF09588 YqaJ-like viral recombinase domain SB48_HM08orf06364 PF05901 Excalibur calcium-binding domain SB48_HM08orf06364 PF00565 Staphylococcal nuclease homologue SB48_HM08orf06365 PF14659 Phage integrase, N-terminal SAM-like domain SB48_HM08orf06365 PF00589 Phage integrase family SB48_HM08orf06367 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SB48_HM08orf06369 PF00510 Cytochrome c oxidase subunit III SB48_HM08orf06370 PF00115 Cytochrome C and Quinol oxidase polypeptide I SB48_HM08orf06372 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SB48_HM08orf06372 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SB48_HM08orf06372 PF00034 Cytochrome c SB48_HM08orf06373 PF01040 UbiA prenyltransferase family SB48_HM08orf06379 PF00664 ABC transporter transmembrane region SB48_HM08orf06379 PF00005 ABC transporter SB48_HM08orf06381 PF00664 ABC transporter transmembrane region SB48_HM08orf06381 PF00005 ABC transporter SB48_HM08orf06384 PF02322 Cytochrome bd terminal oxidase subunit II SB48_HM08orf06385 PF01654 Cytochrome bd terminal oxidase subunit I SB48_HM08orf06388 PF01522 Polysaccharide deacetylase SB48_HM08orf06393 PF14089 KinB-signalling pathway activation in sporulation SB48_HM08orf06394 PF17898 Spore germination GerD central core domain SB48_HM08orf06397 PF10609 NUBPL iron-transfer P-loop NTPase SB48_HM08orf06398 PF01520 N-acetylmuramoyl-L-alanine amidase SB48_HM08orf06400 PF00324 Amino acid permease SB48_HM08orf06403 PF14306 PUA-like domain SB48_HM08orf06403 PF01747 ATP-sulfurylase SB48_HM08orf06410 PF00380 Ribosomal protein S9/S16 SB48_HM08orf06412 PF00572 Ribosomal protein L13 SB48_HM08orf06414 PF01416 tRNA pseudouridine synthase SB48_HM08orf06416 PF02361 Cobalt transport protein SB48_HM08orf06417 PF00005 ABC transporter SB48_HM08orf06418 PF00005 ABC transporter SB48_HM08orf06421 PF01196 Ribosomal protein L17 SB48_HM08orf06422 PF01000 RNA polymerase Rpb3/RpoA insert domain SB48_HM08orf06422 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SB48_HM08orf06422 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SB48_HM08orf06423 PF00411 Ribosomal protein S11 SB48_HM08orf06425 PF00416 Ribosomal protein S13/S18 SB48_HM08orf06426 PF01176 Translation initiation factor 1A / IF-1 SB48_HM08orf06429 PF05191 Adenylate kinase, active site lid SB48_HM08orf06431 PF00344 SecY translocase SB48_HM08orf06432 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SB48_HM08orf06435 PF00327 Ribosomal protein L30p/L7e SB48_HM08orf06436 PF00333 Ribosomal protein S5, N-terminal domain SB48_HM08orf06436 PF03719 Ribosomal protein S5, C-terminal domain SB48_HM08orf06438 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SB48_HM08orf06440 PF00347 Ribosomal protein L6 SB48_HM08orf06441 PF00410 Ribosomal protein S8 SB48_HM08orf06443 PF00253 Ribosomal protein S14p/S29e SB48_HM08orf06444 PF00673 ribosomal L5P family C-terminus SB48_HM08orf06444 PF00281 Ribosomal protein L5 SB48_HM08orf06445 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SB48_HM08orf06445 PF00467 KOW motif SB48_HM08orf06446 PF00238 Ribosomal protein L14p/L23e SB48_HM08orf06447 PF00366 Ribosomal protein S17 SB48_HM08orf06448 PF00831 Ribosomal L29 protein SB48_HM08orf06449 PF00252 Ribosomal protein L16p/L10e SB48_HM08orf06450 PF07650 KH domain SB48_HM08orf06450 PF00189 Ribosomal protein S3, C-terminal domain SB48_HM08orf06451 PF00237 Ribosomal protein L22p/L17e SB48_HM08orf06452 PF00203 Ribosomal protein S19 SB48_HM08orf06453 PF00181 Ribosomal Proteins L2, RNA binding domain SB48_HM08orf06453 PF03947 Ribosomal Proteins L2, C-terminal domain SB48_HM08orf06455 PF00276 Ribosomal protein L23 SB48_HM08orf06457 PF00573 Ribosomal protein L4/L1 family SB48_HM08orf06459 PF00297 Ribosomal protein L3 SB48_HM08orf06460 PF00338 Ribosomal protein S10p/S20e SB48_HM08orf06462 PF03144 Elongation factor Tu domain 2 SB48_HM08orf06462 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf06462 PF03143 Elongation factor Tu C-terminal domain SB48_HM08orf06463 PF03764 Elongation factor G, domain IV SB48_HM08orf06463 PF00009 Elongation factor Tu GTP binding domain SB48_HM08orf06463 PF00679 Elongation factor G C-terminus SB48_HM08orf06463 PF14492 Elongation Factor G, domain II SB48_HM08orf06463 PF03144 Elongation factor Tu domain 2 SB48_HM08orf06464 PF00177 Ribosomal protein S7p/S5e SB48_HM08orf06465 PF00164 Ribosomal protein S12/S23 SB48_HM08orf06467 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SB48_HM08orf06470 PF04983 RNA polymerase Rpb1, domain 3 SB48_HM08orf06470 PF04997 RNA polymerase Rpb1, domain 1 SB48_HM08orf06470 PF00623 RNA polymerase Rpb1, domain 2 SB48_HM08orf06470 PF05000 RNA polymerase Rpb1, domain 4 SB48_HM08orf06470 PF04998 RNA polymerase Rpb1, domain 5 SB48_HM08orf06473 PF00562 RNA polymerase Rpb2, domain 6 SB48_HM08orf06473 PF04563 RNA polymerase beta subunit SB48_HM08orf06473 PF04560 RNA polymerase Rpb2, domain 7 SB48_HM08orf06473 PF10385 RNA polymerase beta subunit external 1 domain SB48_HM08orf06473 PF04565 RNA polymerase Rpb2, domain 3 SB48_HM08orf06473 PF04561 RNA polymerase Rpb2, domain 2 SB48_HM08orf06475 PF05175 Methyltransferase small domain SB48_HM08orf06476 PF16320 Ribosomal protein L7/L12 dimerisation domain SB48_HM08orf06476 PF00542 Ribosomal protein L7/L12 C-terminal domain SB48_HM08orf06478 PF00466 Ribosomal protein L10 SB48_HM08orf06481 PF00687 Ribosomal protein L1p/L10e family SB48_HM08orf06482 PF03946 Ribosomal protein L11, N-terminal domain SB48_HM08orf06482 PF00298 Ribosomal protein L11, RNA binding domain SB48_HM08orf06483 PF02357 Transcription termination factor nusG SB48_HM08orf06483 PF00467 KOW motif SB48_HM08orf06484 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SB48_HM08orf06485 PF00471 Ribosomal protein L33 SB48_HM08orf06487 PF08281 Sigma-70, region 4 SB48_HM08orf06487 PF04542 Sigma-70 region 2 SB48_HM08orf06488 PF05991 YacP-like NYN domain SB48_HM08orf06489 PF08032 RNA 2'-O ribose methyltransferase substrate binding SB48_HM08orf06489 PF00588 SpoU rRNA Methylase family SB48_HM08orf06490 PF00636 Ribonuclease III domain SB48_HM08orf06491 PF01406 tRNA synthetases class I (C) catalytic domain SB48_HM08orf06491 PF09190 DALR domain SB48_HM08orf06492 PF00132 Bacterial transferase hexapeptide (six repeats) SB48_HM08orf06492 PF06426 Serine acetyltransferase, N-terminal SB48_HM08orf06495 PF00749 tRNA synthetases class I (E and Q), catalytic domain SB48_HM08orf06501 PF02542 YgbB family SB48_HM08orf06502 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SB48_HM08orf06506 PF18073 Rubredoxin metal binding domain SB48_HM08orf06507 PF10431 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf06507 PF02861 Clp amino terminal domain, pathogenicity island component SB48_HM08orf06507 PF17871 AAA lid domain SB48_HM08orf06507 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf06507 PF07724 AAA domain (Cdc48 subfamily) SB48_HM08orf06508 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SB48_HM08orf06510 PF02151 UvrB/uvrC motif SB48_HM08orf06511 PF17727 CtsR C-terminal dimerization domain SB48_HM08orf06511 PF05848 CtsR N-terminal HTH domain SB48_HM08orf06524 PF13662 Toprim domain SB48_HM08orf06524 PF02132 RecR protein SB48_HM08orf06526 PF02575 YbaB/EbfC DNA-binding family SB48_HM08orf06528 PF12169 DNA polymerase III subunits gamma and tau domain III SB48_HM08orf06530 PF14437 MafB19-like deaminase SB48_HM08orf06534 PF00872 Transposase, Mutator family SB48_HM08orf06540 PF01476 LysM domain SB48_HM08orf06540 PF00704 Glycosyl hydrolases family 18 SB48_HM08orf06542 PF01712 Deoxynucleoside kinase SB48_HM08orf06543 PF01712 Deoxynucleoside kinase SB48_HM08orf06546 PF02403 Seryl-tRNA synthetase N-terminal domain SB48_HM08orf06546 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SB48_HM08orf06548 PF01174 SNO glutamine amidotransferase family SB48_HM08orf06550 PF01680 SOR/SNZ family SB48_HM08orf06552 PF07943 Penicillin-binding protein 5, C-terminal domain SB48_HM08orf06552 PF00768 D-alanyl-D-alanine carboxypeptidase SB48_HM08orf06556 PF00478 IMP dehydrogenase / GMP reductase domain SB48_HM08orf06556 PF00571 CBS domain SB48_HM08orf06557 PF14175 YaaC-like Protein SB48_HM08orf06566 PF01336 OB-fold nucleic acid binding domain SB48_HM08orf06566 PF00152 tRNA synthetases class II (D, K and N) SB48_HM08orf06569 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SB48_HM08orf06570 PF02152 Dihydroneopterin aldolase SB48_HM08orf06571 PF00809 Pterin binding enzyme SB48_HM08orf06573 PF00291 Pyridoxal-phosphate dependent enzyme SB48_HM08orf06575 PF01430 Hsp33 protein SB48_HM08orf06576 PF03309 Type III pantothenate kinase SB48_HM08orf06578 PF01434 Peptidase family M41 SB48_HM08orf06578 PF06480 FtsH Extracellular SB48_HM08orf06578 PF17862 AAA+ lid domain SB48_HM08orf06578 PF00004 ATPase family associated with various cellular activities (AAA) SB48_HM08orf06579 PF00156 Phosphoribosyl transferase domain SB48_HM08orf06580 PF01171 PP-loop family SB48_HM08orf06580 PF11734 TilS substrate C-terminal domain SB48_HM08orf06580 PF09179 TilS substrate binding domain SB48_HM08orf06583 PF00069 Protein kinase domain SB48_HM08orf06584 PF00092 von Willebrand factor type A domain SB48_HM08orf06586 PF07228 Stage II sporulation protein E (SpoIIE) SB48_HM08orf06592 PF00575 S1 RNA binding domain SB48_HM08orf06594 PF09578 Spore cortex protein YabQ (Spore_YabQ) SB48_HM08orf06595 PF07873 YabP family SB48_HM08orf06597 PF01479 S4 domain SB48_HM08orf06599 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SB48_HM08orf06599 PF03819 MazG nucleotide pyrophosphohydrolase domain SB48_HM08orf06602 PF14667 Polysaccharide biosynthesis C-terminal domain SB48_HM08orf06602 PF01943 Polysaccharide biosynthesis protein SB48_HM08orf06604 PF15714 Stage V sporulation protein T C-terminal, transcription factor SB48_HM08orf06604 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SB48_HM08orf06608 PF02559 CarD-like/TRCF domain SB48_HM08orf06608 PF00270 DEAD/DEAH box helicase SB48_HM08orf06608 PF00271 Helicase conserved C-terminal domain SB48_HM08orf06608 PF03461 TRCF domain SB48_HM08orf06608 PF17757 UvrB interaction domain SB48_HM08orf06610 PF10955 Protein of unknown function (DUF2757) SB48_HM08orf06612 PF01195 Peptidyl-tRNA hydrolase SB48_HM08orf06616 PF14693 Ribosomal protein TL5, C-terminal domain SB48_HM08orf06616 PF01386 Ribosomal L25p family SB48_HM08orf06618 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SB48_HM08orf06618 PF14572 Phosphoribosyl synthetase-associated domain SB48_HM08orf06619 PF00132 Bacterial transferase hexapeptide (six repeats) SB48_HM08orf06619 PF00483 Nucleotidyl transferase SB48_HM08orf06621 PF02687 FtsX-like permease family SB48_HM08orf06621 PF12704 MacB-like periplasmic core domain SB48_HM08orf06621 PF00005 ABC transporter SB48_HM08orf06625 PF04026 SpoVG SB48_HM08orf06628 PF01042 Endoribonuclease L-PSP SB48_HM08orf06630 PF00156 Phosphoribosyl transferase domain SB48_HM08orf06630 PF09182 Bacterial purine repressor, N-terminal SB48_HM08orf06632 PF08544 GHMP kinases C terminal SB48_HM08orf06632 PF00288 GHMP kinases N terminal domain SB48_HM08orf06634 PF00269 Small, acid-soluble spore proteins, alpha/beta type SB48_HM08orf06635 PF06257 Biofilm formation stimulator VEG SB48_HM08orf06637 PF05582 YabG peptidase U57 SB48_HM08orf06639 PF00398 Ribosomal RNA adenine dimethylase SB48_HM08orf06641 PF13662 Toprim domain SB48_HM08orf06641 PF13331 Domain of unknown function (DUF4093) SB48_HM08orf06643 PF01026 TatD related DNase SB48_HM08orf06647 PF08264 Anticodon-binding domain of tRNA SB48_HM08orf06647 PF09334 tRNA synthetases class I (M) SB48_HM08orf06647 PF01588 Putative tRNA binding domain SB48_HM08orf06649 PF18277 AbrB C-terminal domain SB48_HM08orf06649 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SB48_HM08orf06652 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SB48_HM08orf06653 PF01541 GIY-YIG catalytic domain SB48_HM08orf06654 PF05175 Methyltransferase small domain SB48_HM08orf06656 PF06156 Initiation control protein YabA SB48_HM08orf06657 PF04468 PSP1 C-terminal conserved region SB48_HM08orf06659 PF09115 DNA polymerase III, delta subunit, C terminal SB48_HM08orf06660 PF03885 Protein of unknown function (DUF327) SB48_HM08orf06662 PF06153 Cyclic-di-AMP receptor SB48_HM08orf06665 PF02223 Thymidylate kinase SB48_HM08orf06666 PF01276 Orn/Lys/Arg decarboxylase, major domain SB48_HM08orf06666 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SB48_HM08orf06667 PF00872 Transposase, Mutator family SB48_HM08orf06668 PF00872 Transposase, Mutator family SB48_HM08orf06669 PF00072 Response regulator receiver domain SB48_HM08orf06671 PF03989 DNA gyrase C-terminal domain, beta-propeller SB48_HM08orf06671 PF00521 DNA gyrase/topoisomerase IV, subunit A SB48_HM08orf06673 PF00204 DNA gyrase B SB48_HM08orf06673 PF00986 DNA gyrase B subunit, carboxyl terminus SB48_HM08orf06673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SB48_HM08orf06673 PF01751 Toprim domain SB48_HM08orf06677 PF04025 Domain of unknown function (DUF370) SB48_HM08orf06678 PF02463 RecF/RecN/SMC N terminal domain SB48_HM08orf06682 PF00712 DNA polymerase III beta subunit, N-terminal domain SB48_HM08orf06682 PF02768 DNA polymerase III beta subunit, C-terminal domain SB48_HM08orf06682 PF02767 DNA polymerase III beta subunit, central domain