WM2015_1 PF00308 Bacterial dnaA protein WM2015_1 PF08299 Bacterial dnaA protein helix-turn-helix WM2015_1 PF11638 DnaA N-terminal domain WM2015_10 PF00753 Metallo-beta-lactamase superfamily WM2015_10 PF07521 RNA-metabolising metallo-beta-lactamase WM2015_10 PF10996 Beta-Casp domain WM2015_1000 PF02534 Type IV secretory system Conjugative DNA transfer WM2015_1002 PF00873 AcrB/AcrD/AcrF family WM2015_1003 PF13437 HlyD family secretion protein WM2015_1004 PF00440 Bacterial regulatory proteins, tetR family WM2015_1005 PF00072 Response regulator receiver domain WM2015_1005 PF13487 HD domain WM2015_1006 PF01636 Phosphotransferase enzyme family WM2015_1008 PF13640 2OG-Fe(II) oxygenase superfamily WM2015_101 PF00317 Ribonucleotide reductase, all-alpha domain WM2015_101 PF02867 Ribonucleotide reductase, barrel domain WM2015_1010 PF00270 DEAD/DEAH box helicase WM2015_1010 PF00271 Helicase conserved C-terminal domain WM2015_1010 PF08494 WM2015_1010 WM2015_1011 PF01068 ATP dependent DNA ligase domain WM2015_1011 PF04675 DNA ligase N terminus WM2015_1011 PF04679 ATP dependent DNA ligase C terminal region WM2015_1013 PF02308 WM2015_1013 WM2015_1013 PF13194 WM2015_1013 WM2015_1014 PF00326 Prolyl oligopeptidase family WM2015_1014 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_1014 PF07676 WD40-like Beta Propeller Repeat WM2015_1015 PF01909 Nucleotidyltransferase domain WM2015_1017 PF05684 WM2015_1017 WM2015_1019 PF01230 HIT domain WM2015_102 PF00268 Ribonucleotide reductase, small chain WM2015_1020 PF00892 EamA-like transporter family WM2015_1021 PF13417 Glutathione S-transferase, N-terminal domain WM2015_1022 PF00571 CBS domain WM2015_1022 PF01769 Divalent cation transporter WM2015_1022 PF03448 MgtE intracellular N domain WM2015_1024 PF00593 TonB dependent receptor WM2015_1024 PF07715 TonB-dependent Receptor Plug Domain WM2015_1024 PF13620 Carboxypeptidase regulatory-like domain WM2015_1026 PF05787 Bacterial protein of unknown function (DUF839) WM2015_1027 PF12697 Alpha/beta hydrolase family WM2015_1028 PF03007 WM2015_1028 WM2015_1028 PF06974 WM2015_1028 WM2015_1029 PF01850 PIN domain WM2015_103 PF00155 Aminotransferase class I and II WM2015_1031 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1031 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WM2015_1032 PF00310 Glutamine amidotransferases class-II WM2015_1032 PF01493 GXGXG motif WM2015_1032 PF01645 Conserved region in glutamate synthase WM2015_1032 PF04898 Glutamate synthase central domain WM2015_1033 PF07884 Vitamin K epoxide reductase family WM2015_1034 PF02128 Fungalysin metallopeptidase (M36) WM2015_1034 PF02225 PA domain WM2015_1034 PF07504 Fungalysin/Thermolysin Propeptide Motif WM2015_1035 PF04264 YceI-like domain WM2015_1036 PF00462 Glutaredoxin WM2015_1037 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1038 PF03167 Uracil DNA glycosylase superfamily WM2015_1039 PF00892 EamA-like transporter family WM2015_104 PF13419 Haloacid dehalogenase-like hydrolase WM2015_1040 PF01494 FAD binding domain WM2015_1041 PF01494 FAD binding domain WM2015_1042 PF00557 Metallopeptidase family M24 WM2015_1042 PF05195 Aminopeptidase P, N-terminal domain WM2015_1043 PF03695 Uncharacterised protein family (UPF0149) WM2015_1045 PF05164 Cell division protein ZapA WM2015_1046 PF01812 5-formyltetrahydrofolate cyclo-ligase family WM2015_1047 PF01878 EVE domain WM2015_1048 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WM2015_1049 PF00593 TonB dependent receptor WM2015_1049 PF07715 TonB-dependent Receptor Plug Domain WM2015_105 PF03079 ARD/ARD' family WM2015_1050 PF00990 GGDEF domain WM2015_1051 PF01207 Dihydrouridine synthase (Dus) WM2015_1052 PF02274 Amidinotransferase WM2015_1054 PF00072 Response regulator receiver domain WM2015_1054 PF00486 Transcriptional regulatory protein, C terminal WM2015_1055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1056 PF03819 MazG nucleotide pyrophosphohydrolase domain WM2015_1058 PF02390 Putative methyltransferase WM2015_106 PF00596 Class II Aldolase and Adducin N-terminal domain WM2015_1060 PF04940 Sensors of blue-light using FAD WM2015_1061 PF00521 DNA gyrase/topoisomerase IV, subunit A WM2015_1061 PF03989 DNA gyrase C-terminal domain, beta-propeller WM2015_1062 PF01476 LysM domain WM2015_1063 PF01909 Nucleotidyltransferase domain WM2015_1065 PF00575 S1 RNA binding domain WM2015_1065 PF09371 Tex-like protein N-terminal domain WM2015_1065 PF12836 Helix-hairpin-helix motif WM2015_1065 PF16921 WM2015_1065 WM2015_1066 PF01464 Transglycosylase SLT domain WM2015_1067 PF00069 Protein kinase domain WM2015_1067 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1068 PF00082 Subtilase family WM2015_1070 PF00691 OmpA family WM2015_1071 PF00069 Protein kinase domain WM2015_1071 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_1071 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_1071 PF01471 Putative peptidoglycan binding domain WM2015_1072 PF00069 Protein kinase domain WM2015_1072 PF01471 Putative peptidoglycan binding domain WM2015_1072 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1074 PF13672 Protein phosphatase 2C WM2015_1078 PF00069 Protein kinase domain WM2015_1078 PF01471 Putative peptidoglycan binding domain WM2015_1078 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1079 PF00069 Protein kinase domain WM2015_1079 PF01471 Putative peptidoglycan binding domain WM2015_1079 PF08308 WM2015_1079 WM2015_108 PF08547 Complex I intermediate-associated protein 30 (CIA30) WM2015_1081 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1083 PF11340 WM2015_1083 WM2015_1089 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WM2015_1089 PF00364 Biotin-requiring enzyme WM2015_1089 PF02785 Biotin carboxylase C-terminal domain WM2015_1089 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_109 PF13430 WM2015_109 WM2015_1090 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_1091 PF01039 Carboxyl transferase domain WM2015_1092 PF00144 Beta-lactamase WM2015_1093 PF00312 Ribosomal protein S15 WM2015_1094 PF00013 KH domain WM2015_1094 PF00575 S1 RNA binding domain WM2015_1094 PF01138 3' exoribonuclease family, domain 1 WM2015_1094 PF03725 3' exoribonuclease family, domain 2 WM2015_1094 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WM2015_1096 PF00691 OmpA family WM2015_1097 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WM2015_1098 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family WM2015_1099 PF13654 AAA domain WM2015_11 PF00591 Glycosyl transferase family, a/b domain WM2015_11 PF02885 Glycosyl transferase family, helical bundle domain WM2015_11 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WM2015_1100 PF00561 alpha/beta hydrolase fold WM2015_1101 PF02592 WM2015_1101 WM2015_1102 PF00892 EamA-like transporter family WM2015_1104 PF01809 WM2015_1104 WM2015_1105 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM2015_1106 PF00691 OmpA family WM2015_1106 PF13505 Outer membrane protein beta-barrel domain WM2015_1107 PF02657 Fe-S metabolism associated domain WM2015_1108 PF01406 tRNA synthetases class I (C) catalytic domain WM2015_1108 PF09190 DALR domain WM2015_1109 PF00557 Metallopeptidase family M24 WM2015_111 PF06537 WM2015_111 WM2015_1110 PF13620 Carboxypeptidase regulatory-like domain WM2015_1111 PF00210 Ferritin-like domain WM2015_1112 PF04324 BFD-like [2Fe-2S] binding domain WM2015_1113 PF01966 HD domain WM2015_1113 PF11871 WM2015_1113 WM2015_1114 PF10014 2OG-Fe dioxygenase WM2015_1115 PF00330 Aconitase family (aconitate hydratase) WM2015_1115 PF00694 Aconitase C-terminal domain WM2015_1116 PF04303 PrpF protein WM2015_1117 PF13424 Tetratricopeptide repeat WM2015_112 PF07969 Amidohydrolase family WM2015_1120 PF04055 Radical SAM superfamily WM2015_1121 PF00326 Prolyl oligopeptidase family WM2015_1121 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM2015_1123 PF00580 UvrD/REP helicase N-terminal domain WM2015_1123 PF12705 PD-(D/E)XK nuclease superfamily WM2015_1123 PF13361 UvrD-like helicase C-terminal domain WM2015_1124 PF12705 PD-(D/E)XK nuclease superfamily WM2015_1128 PF03358 NADPH-dependent FMN reductase WM2015_1129 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_1129 PF03466 LysR substrate binding domain WM2015_113 PF07969 Amidohydrolase family WM2015_1130 PF04199 Putative cyclase WM2015_1131 PF00892 EamA-like transporter family WM2015_1134 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WM2015_1135 PF10977 WM2015_1135 WM2015_1137 PF00330 Aconitase family (aconitate hydratase) WM2015_1137 PF06434 Aconitate hydratase 2 N-terminus WM2015_1137 PF11791 Aconitate B N-terminal domain WM2015_1139 PF03965 Penicillinase repressor WM2015_114 PF00830 Ribosomal L28 family WM2015_1140 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_1140 PF05569 BlaR1 peptidase M56 WM2015_1141 PF12799 Leucine Rich repeats (2 copies) WM2015_1142 PF13469 Sulfotransferase family WM2015_1144 PF07484 Phage Tail Collar Domain WM2015_1145 PF01345 WM2015_1145 WM2015_1148 PF13620 Carboxypeptidase regulatory-like domain WM2015_115 PF00471 Ribosomal protein L33 WM2015_1150 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase WM2015_1152 PF00639 PPIC-type PPIASE domain WM2015_1153 PF00639 PPIC-type PPIASE domain WM2015_1154 PF00884 Sulfatase WM2015_1154 PF13432 Tetratricopeptide repeat WM2015_1154 PF14559 Tetratricopeptide repeat WM2015_1156 PF01345 WM2015_1156 WM2015_1156 PF17164 WM2015_1156 WM2015_1157 PF13432 Tetratricopeptide repeat WM2015_1157 PF14559 Tetratricopeptide repeat WM2015_1158 PF07593 WM2015_1158 WM2015_1158 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_1159 PF13469 Sulfotransferase family WM2015_116 PF04002 RadC-like JAB domain WM2015_1161 PF12680 SnoaL-like domain WM2015_1162 PF01266 FAD dependent oxidoreductase WM2015_1165 PF13420 Acetyltransferase (GNAT) domain WM2015_1166 PF10101 WM2015_1166 WM2015_1167 PF00069 Protein kinase domain WM2015_1167 PF13374 Tetratricopeptide repeat WM2015_1167 PF13424 Tetratricopeptide repeat WM2015_1168 PF07638 ECF sigma factor WM2015_117 PF02441 Flavoprotein WM2015_117 PF04127 DNA / pantothenate metabolism flavoprotein WM2015_1171 PF10411 Disulfide bond isomerase protein N-terminus WM2015_1171 PF13098 Thioredoxin-like domain WM2015_1175 PF00326 Prolyl oligopeptidase family WM2015_1175 PF07676 WD40-like Beta Propeller Repeat WM2015_1176 PF00144 Beta-lactamase WM2015_1177 PF01483 Proprotein convertase P-domain WM2015_1178 PF07593 WM2015_1178 WM2015_1178 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_1179 PF13432 Tetratricopeptide repeat WM2015_1179 PF14559 Tetratricopeptide repeat WM2015_118 PF00692 dUTPase WM2015_1180 PF02517 CAAX protease self-immunity WM2015_1182 PF03606 WM2015_1182 WM2015_1183 PF00266 Aminotransferase class-V WM2015_1184 PF00753 Metallo-beta-lactamase superfamily WM2015_1185 PF11697 WM2015_1185 WM2015_1187 PF13229 Right handed beta helix region WM2015_1188 PF02627 Carboxymuconolactone decarboxylase family WM2015_1189 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_119 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_119 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_119 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_119 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_1191 PF04241 WM2015_1191 WM2015_1192 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WM2015_1195 PF01882 WM2015_1195 WM2015_1196 PF07726 ATPase family associated with various cellular activities (AAA) WM2015_12 PF00156 Phosphoribosyl transferase domain WM2015_12 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WM2015_120 PF00849 RNA pseudouridylate synthase WM2015_1200 PF01944 WM2015_1200 WM2015_1201 PF06271 WM2015_1201 WM2015_1202 PF06161 WM2015_1202 WM2015_1203 PF02222 ATP-grasp domain WM2015_1206 PF01381 Helix-turn-helix WM2015_1207 PF00107 Zinc-binding dehydrogenase WM2015_1207 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1208 PF00293 NUDIX domain WM2015_1208 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain WM2015_1208 PF09297 NADH pyrophosphatase zinc ribbon domain WM2015_1209 PF13646 HEAT repeats WM2015_121 PF04107 Glutamate-cysteine ligase family 2(GCS2) WM2015_1210 PF00487 WM2015_1210 WM2015_1211 PF00111 2Fe-2S iron-sulfur cluster binding domain WM2015_1211 PF00175 Oxidoreductase NAD-binding domain WM2015_1212 PF00440 Bacterial regulatory proteins, tetR family WM2015_1213 PF00141 Peroxidase WM2015_1214 PF03160 Calx-beta domain WM2015_1214 PF14312 WM2015_1214 WM2015_1217 PF05593 WM2015_1217 WM2015_1217 PF13360 PQQ-like domain WM2015_1217 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_1218 PF07603 WM2015_1218 WM2015_1219 PF07603 WM2015_1219 WM2015_122 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM2015_1220 PF14539 Domain of unknown function (DUF4442) WM2015_1221 PF00326 Prolyl oligopeptidase family WM2015_1221 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_1222 PF00072 Response regulator receiver domain WM2015_1222 PF00990 GGDEF domain WM2015_1223 PF01132 Elongation factor P (EF-P) OB domain WM2015_1223 PF08207 Elongation factor P (EF-P) KOW-like domain WM2015_1223 PF09285 Elongation factor P, C-terminal WM2015_1224 PF01817 Chorismate mutase type II WM2015_1224 PF02153 Prephenate dehydrogenase WM2015_1225 PF04993 TfoX N-terminal domain WM2015_1226 PF01124 MAPEG family WM2015_1228 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1228 PF13602 Zinc-binding dehydrogenase WM2015_123 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM2015_1230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1230 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_1231 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WM2015_1231 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WM2015_1232 PF11845 WM2015_1232 WM2015_1233 PF11127 Protein of unknown function (DUF2892) WM2015_1235 PF01022 Bacterial regulatory protein, arsR family WM2015_1236 PF01642 Methylmalonyl-CoA mutase WM2015_1236 PF02310 B12 binding domain WM2015_1236 PF03308 ArgK protein WM2015_1237 PF00561 alpha/beta hydrolase fold WM2015_1238 PF12802 MarR family WM2015_1239 PF00854 POT family WM2015_124 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_1240 PF01336 OB-fold nucleic acid binding domain WM2015_1240 PF02811 PHP domain WM2015_1240 PF07733 Bacterial DNA polymerase III alpha subunit WM2015_1240 PF14579 Helix-hairpin-helix motif WM2015_1241 PF07638 ECF sigma factor WM2015_1242 PF00069 Protein kinase domain WM2015_1242 PF13424 Tetratricopeptide repeat WM2015_1244 PF00226 DnaJ domain WM2015_1244 PF01556 DnaJ C terminal domain WM2015_1245 PF13591 MerR HTH family regulatory protein WM2015_1246 PF01522 Polysaccharide deacetylase WM2015_1247 PF00270 DEAD/DEAH box helicase WM2015_1247 PF00271 Helicase conserved C-terminal domain WM2015_1247 PF03880 DbpA RNA binding domain WM2015_1248 PF00512 His Kinase A (phospho-acceptor) domain WM2015_1248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1249 PF00072 Response regulator receiver domain WM2015_1249 PF00486 Transcriptional regulatory protein, C terminal WM2015_125 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_125 PF12911 WM2015_125 WM2015_1251 PF08487 WM2015_1251 WM2015_1251 PF13768 von Willebrand factor type A domain WM2015_1252 PF04203 Sortase family WM2015_1253 PF04055 Radical SAM superfamily WM2015_1255 PF00326 Prolyl oligopeptidase family WM2015_1255 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM2015_1256 PF10973 WM2015_1256 WM2015_1257 PF00069 Protein kinase domain WM2015_1257 PF13374 Tetratricopeptide repeat WM2015_1257 PF13424 Tetratricopeptide repeat WM2015_1259 PF00072 Response regulator receiver domain WM2015_1259 PF00196 Bacterial regulatory proteins, luxR family WM2015_126 PF01545 Cation efflux family WM2015_1260 PF00498 FHA domain WM2015_1261 PF05990 Alpha/beta hydrolase of unknown function (DUF900) WM2015_1262 PF05697 Bacterial trigger factor protein (TF) WM2015_1262 PF05698 Bacterial trigger factor protein (TF) C-terminus WM2015_1263 PF00574 Clp protease WM2015_1264 PF06689 ClpX C4-type zinc finger WM2015_1264 PF07724 AAA domain (Cdc48 subfamily) WM2015_1264 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_1265 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_1265 PF02190 ATP-dependent protease La (LON) domain WM2015_1265 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_1266 PF00216 Bacterial DNA-binding protein WM2015_1267 PF13616 PPIC-type PPIASE domain WM2015_1267 PF13624 SurA N-terminal domain WM2015_1268 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_1269 PF03358 NADPH-dependent FMN reductase WM2015_127 PF00005 ABC transporter WM2015_127 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM2015_1270 PF00570 HRDC domain WM2015_1270 PF01612 3'-5' exonuclease WM2015_1271 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1272 PF11737 WM2015_1272 WM2015_1273 PF05995 Cysteine dioxygenase type I WM2015_1274 PF00561 alpha/beta hydrolase fold WM2015_1275 PF03922 OmpW family WM2015_1276 PF04244 Deoxyribodipyrimidine photo-lyase-related protein WM2015_1277 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WM2015_1277 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WM2015_1278 PF03966 Trm112p-like protein WM2015_1279 PF00731 AIR carboxylase WM2015_128 PF00005 ABC transporter WM2015_128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM2015_1280 PF02222 ATP-grasp domain WM2015_1282 PF00202 Aminotransferase class-III WM2015_1283 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WM2015_1283 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WM2015_1284 PF00929 Exonuclease WM2015_1285 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) WM2015_1286 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1287 PF00633 Helix-hairpin-helix motif WM2015_1287 PF00730 HhH-GPD superfamily base excision DNA repair protein WM2015_1287 PF10576 Iron-sulfur binding domain of endonuclease III WM2015_1288 PF02508 WM2015_1288 WM2015_1289 PF04205 FMN-binding domain WM2015_1290 PF03116 WM2015_1290 WM2015_1291 PF03703 WM2015_1291 WM2015_1292 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM2015_1292 PF10531 SLBB domain WM2015_1292 PF12838 4Fe-4S dicluster domain WM2015_1292 PF13375 RnfC Barrel sandwich hybrid domain WM2015_1293 PF04060 Putative Fe-S cluster WM2015_1293 PF14697 4Fe-4S dicluster domain WM2015_1296 PF02508 WM2015_1296 WM2015_1297 PF01588 Putative tRNA binding domain WM2015_1297 PF09334 tRNA synthetases class I (M) WM2015_1298 PF10609 ParA/MinD ATPase like WM2015_1299 PF00692 dUTPase WM2015_13 PF13649 Methyltransferase domain WM2015_130 PF02527 rRNA small subunit methyltransferase G WM2015_1300 PF13180 PDZ domain WM2015_1300 PF13365 Trypsin-like peptidase domain WM2015_1302 PF00355 Rieske [2Fe-2S] domain WM2015_1302 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WM2015_1303 PF00032 Cytochrome b(C-terminal)/b6/petD WM2015_1303 PF00033 Cytochrome b(N-terminal)/b6/petB WM2015_1304 PF02167 Cytochrome C1 family WM2015_1305 PF00043 Glutathione S-transferase, C-terminal domain WM2015_1305 PF13417 Glutathione S-transferase, N-terminal domain WM2015_1306 PF04386 Stringent starvation protein B WM2015_1307 PF11743 WM2015_1307 WM2015_1308 PF01713 Smr domain WM2015_1309 PF01975 Survival protein SurE WM2015_131 PF13614 AAA domain WM2015_1310 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) WM2015_1311 PF09335 WM2015_1311 WM2015_1312 PF01551 Peptidase family M23 WM2015_1313 PF02082 Transcriptional regulator WM2015_1314 PF01476 LysM domain WM2015_1314 PF01520 N-acetylmuramoyl-L-alanine amidase WM2015_1314 PF11741 AMIN domain WM2015_1315 PF01119 DNA mismatch repair protein, C-terminal domain WM2015_1315 PF08676 MutL C terminal dimerisation domain WM2015_1315 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1316 PF01715 IPP transferase WM2015_1317 PF17209 WM2015_1317 WM2015_1318 PF01926 50S ribosome-binding GTPase WM2015_1318 PF13167 WM2015_1318 WM2015_1318 PF16360 WM2015_1318 WM2015_1319 PF01145 SPFH domain / Band 7 family WM2015_1319 PF12221 WM2015_1319 WM2015_132 PF02195 ParB-like nuclease domain WM2015_1320 PF01145 SPFH domain / Band 7 family WM2015_1321 PF00709 Adenylosuccinate synthetase WM2015_1322 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_1322 PF02403 Seryl-tRNA synthetase N-terminal domain WM2015_1323 PF00266 Aminotransferase class-V WM2015_1325 PF00155 Aminotransferase class I and II WM2015_1326 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM2015_1327 PF02224 Cytidylate kinase WM2015_1328 PF00575 S1 RNA binding domain WM2015_1329 PF00216 Bacterial DNA-binding protein WM2015_133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1330 PF06305 WM2015_1330 WM2015_1331 PF13176 Tetratricopeptide repeat WM2015_1331 PF13432 Tetratricopeptide repeat WM2015_1332 PF00953 Glycosyl transferase family 4 WM2015_1333 PF02719 Polysaccharide biosynthesis protein WM2015_1333 PF13727 CoA-binding domain WM2015_1334 PF00756 Putative esterase WM2015_1335 PF01106 NifU-like domain WM2015_1336 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_1337 PF00034 Cytochrome c WM2015_1338 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1338 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1338 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_1339 PF00676 Dehydrogenase E1 component WM2015_1339 PF02779 Transketolase, pyrimidine binding domain WM2015_1339 PF02780 Transketolase, C-terminal domain WM2015_134 PF00072 Response regulator receiver domain WM2015_134 PF00158 Sigma-54 interaction domain WM2015_134 PF02954 Bacterial regulatory protein, Fis family WM2015_1340 PF00563 EAL domain WM2015_1340 PF12792 WM2015_1340 WM2015_1341 PF13738 Pyridine nucleotide-disulphide oxidoreductase WM2015_1342 PF07885 Ion channel WM2015_1343 PF00155 Aminotransferase class I and II WM2015_1344 PF00107 Zinc-binding dehydrogenase WM2015_1344 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1345 PF02146 Sir2 family WM2015_1346 PF00205 Thiamine pyrophosphate enzyme, central domain WM2015_1346 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM2015_1346 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM2015_1347 PF12158 WM2015_1347 WM2015_1348 PF00158 Sigma-54 interaction domain WM2015_1349 PF13481 AAA domain WM2015_1349 PF13541 Subunit ChlI of Mg-chelatase WM2015_135 PF02687 WM2015_135 WM2015_135 PF12704 MacB-like periplasmic core domain WM2015_1350 PF07027 WM2015_1350 WM2015_1351 PF01938 TRAM domain WM2015_1351 PF05958 tRNA (Uracil-5-)-methyltransferase WM2015_1352 PF00933 Glycosyl hydrolase family 3 N terminal domain WM2015_1353 PF00924 Mechanosensitive ion channel WM2015_1354 PF00156 Phosphoribosyl transferase domain WM2015_1355 PF01048 Phosphorylase superfamily WM2015_1357 PF13489 Methyltransferase domain WM2015_1358 PF05099 Tellurite resistance protein TerB WM2015_1359 PF03806 WM2015_1359 WM2015_136 PF02687 WM2015_136 WM2015_136 PF12704 MacB-like periplasmic core domain WM2015_1360 PF00488 MutS domain V WM2015_1360 PF01624 MutS domain I WM2015_1360 PF05188 MutS domain II WM2015_1360 PF05190 MutS family domain IV WM2015_1360 PF05192 MutS domain III WM2015_1361 PF02464 Competence-damaged protein WM2015_1362 PF13563 2'-5' RNA ligase superfamily WM2015_1363 PF00154 recA bacterial DNA recombination protein WM2015_1364 PF02631 RecX family WM2015_1365 PF01411 tRNA synthetases class II (A) WM2015_1365 PF02272 DHHA1 domain WM2015_1365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM2015_1366 PF07883 Cupin domain WM2015_1368 PF00478 IMP dehydrogenase / GMP reductase domain WM2015_1368 PF00571 CBS domain WM2015_1369 PF00117 Glutamine amidotransferase class-I WM2015_1369 PF00958 GMP synthase C terminal domain WM2015_1369 PF02540 NAD synthase WM2015_137 PF00005 ABC transporter WM2015_1370 PF14437 WM2015_1370 WM2015_1371 PF01432 Peptidase family M3 WM2015_1372 PF02586 Uncharacterised ACR, COG2135 WM2015_1373 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1373 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1373 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_1374 PF05088 WM2015_1374 WM2015_1375 PF01513 ATP-NAD kinase WM2015_1376 PF06189 WM2015_1376 WM2015_1377 PF17164 WM2015_1377 WM2015_1378 PF01979 Amidohydrolase family WM2015_1378 PF07676 WD40-like Beta Propeller Repeat WM2015_1379 PF04102 SlyX WM2015_1380 PF09084 NMT1/THI5 like WM2015_1381 PF00990 GGDEF domain WM2015_1381 PF05231 WM2015_1381 WM2015_1382 PF00919 Uncharacterized protein family UPF0004 WM2015_1382 PF04055 Radical SAM superfamily WM2015_1383 PF01497 Periplasmic binding protein WM2015_1384 PF11700 WM2015_1384 WM2015_1385 PF00106 short chain dehydrogenase WM2015_1386 PF00498 FHA domain WM2015_1386 PF00563 EAL domain WM2015_1387 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) WM2015_1387 PF13435 Cytochrome c554 and c-prime WM2015_1388 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) WM2015_1389 PF01431 Peptidase family M13 WM2015_1389 PF05649 Peptidase family M13 WM2015_139 PF13437 HlyD family secretion protein WM2015_1390 PF01966 HD domain WM2015_1390 PF11871 WM2015_1390 WM2015_1391 PF00072 Response regulator receiver domain WM2015_1393 PF00474 Sodium:solute symporter family WM2015_1394 PF00005 ABC transporter WM2015_1394 PF00664 ABC transporter transmembrane region WM2015_1395 PF00005 ABC transporter WM2015_1395 PF00664 ABC transporter transmembrane region WM2015_1396 PF02322 WM2015_1396 WM2015_1397 PF01654 WM2015_1397 WM2015_1398 PF01894 Uncharacterised protein family UPF0047 WM2015_1399 PF00472 RF-1 domain WM2015_1399 PF03462 PCRF domain WM2015_140 PF00106 short chain dehydrogenase WM2015_1400 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WM2015_1400 PF01488 Shikimate / quinate 5-dehydrogenase WM2015_1400 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WM2015_1401 PF13432 Tetratricopeptide repeat WM2015_1401 PF14559 Tetratricopeptide repeat WM2015_1402 PF03550 Outer membrane lipoprotein LolB WM2015_1403 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WM2015_1403 PF14572 Phosphoribosyl synthetase-associated domain WM2015_1404 PF03606 WM2015_1404 WM2015_1405 PF00326 Prolyl oligopeptidase family WM2015_1406 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_1407 PF01037 AsnC family WM2015_1407 PF13404 AsnC-type helix-turn-helix domain WM2015_1408 PF00330 Aconitase family (aconitate hydratase) WM2015_1408 PF00694 Aconitase C-terminal domain WM2015_1409 PF03797 Autotransporter beta-domain WM2015_141 PF03899 WM2015_141 WM2015_1411 PF00656 Caspase domain WM2015_1411 PF08238 Sel1 repeat WM2015_1412 PF00069 Protein kinase domain WM2015_1413 PF04356 Protein of unknown function (DUF489) WM2015_1414 PF03054 tRNA methyl transferase WM2015_1415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_1415 PF03466 LysR substrate binding domain WM2015_1416 PF01274 Malate synthase WM2015_1417 PF00463 Isocitrate lyase family WM2015_1418 PF02617 ATP-dependent Clp protease adaptor protein ClpS WM2015_1419 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_1419 PF02861 Clp amino terminal domain WM2015_1419 PF07724 AAA domain (Cdc48 subfamily) WM2015_1419 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_142 PF00119 ATP synthase A chain WM2015_1420 PF01176 Translation initiation factor 1A / IF-1 WM2015_1421 PF00535 Glycosyl transferase family 2 WM2015_1421 PF04138 WM2015_1421 WM2015_1421 PF13231 WM2015_1421 WM2015_1423 PF00069 Protein kinase domain WM2015_1424 PF02274 Amidinotransferase WM2015_1425 PF00472 RF-1 domain WM2015_1425 PF03462 PCRF domain WM2015_1426 PF00152 tRNA synthetases class II (D, K and N) WM2015_1426 PF01336 OB-fold nucleic acid binding domain WM2015_1427 PF01593 Flavin containing amine oxidoreductase WM2015_1427 PF13450 NAD(P)-binding Rossmann-like domain WM2015_1429 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_143 PF00137 ATP synthase subunit C WM2015_1430 PF01008 Initiation factor 2 subunit family WM2015_1431 PF00206 Lyase WM2015_1431 PF10415 Fumarase C C-terminus WM2015_1432 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_1432 PF03449 Transcription elongation factor, N-terminal WM2015_1433 PF00011 Hsp20/alpha crystallin family WM2015_1434 PF01553 Acyltransferase WM2015_1435 PF01694 Rhomboid family WM2015_1436 PF10604 Polyketide cyclase / dehydrase and lipid transport WM2015_1437 PF10728 Domain of unknown function (DUF2520) WM2015_1438 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WM2015_1439 PF04339 WM2015_1439 WM2015_144 PF00430 ATP synthase B/B' CF(0) WM2015_1440 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1441 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM2015_1441 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM2015_1442 PF01580 FtsK/SpoIIIE family WM2015_1442 PF09397 Ftsk gamma domain WM2015_1442 PF13491 WM2015_1442 WM2015_1443 PF03548 Outer membrane lipoprotein carrier protein LolA WM2015_1444 PF13583 Metallo-peptidase family M12B Reprolysin-like WM2015_1447 PF06258 WM2015_1447 WM2015_1448 PF03279 WM2015_1448 WM2015_1449 PF00005 ABC transporter WM2015_1449 PF00664 ABC transporter transmembrane region WM2015_145 PF00213 ATP synthase delta (OSCP) subunit WM2015_1451 PF00781 Diacylglycerol kinase catalytic domain WM2015_1452 PF00487 WM2015_1452 WM2015_1453 PF00072 Response regulator receiver domain WM2015_1453 PF00196 Bacterial regulatory proteins, luxR family WM2015_1456 PF01610 WM2015_1456 WM2015_1456 PF13542 WM2015_1456 WM2015_1456 PF14690 WM2015_1456 WM2015_1457 PF13229 Right handed beta helix region WM2015_1459 PF03547 WM2015_1459 WM2015_146 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_146 PF00306 ATP synthase alpha/beta chain, C terminal domain WM2015_146 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM2015_1460 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) WM2015_1461 PF06052 3-hydroxyanthranilic acid dioxygenase WM2015_1462 PF01042 Endoribonuclease L-PSP WM2015_1463 PF00171 Aldehyde dehydrogenase family WM2015_1464 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_1465 PF00152 tRNA synthetases class II (D, K and N) WM2015_1465 PF01336 OB-fold nucleic acid binding domain WM2015_1466 PF01521 Iron-sulphur cluster biosynthesis WM2015_1468 PF01250 Ribosomal protein S6 WM2015_1469 PF01084 Ribosomal protein S18 WM2015_147 PF00231 ATP synthase WM2015_1470 PF01281 Ribosomal protein L9, N-terminal domain WM2015_1470 PF03948 Ribosomal protein L9, C-terminal domain WM2015_1471 PF00772 DnaB-like helicase N terminal domain WM2015_1471 PF03796 DnaB-like helicase C terminal domain WM2015_1472 PF00842 Alanine racemase, C-terminal domain WM2015_1472 PF01168 Alanine racemase, N-terminal domain WM2015_1473 PF00919 Uncharacterized protein family UPF0004 WM2015_1473 PF01938 TRAM domain WM2015_1473 PF04055 Radical SAM superfamily WM2015_1474 PF02562 PhoH-like protein WM2015_1475 PF02130 Uncharacterized protein family UPF0054 WM2015_1476 PF00571 CBS domain WM2015_1476 PF03471 Transporter associated domain WM2015_1478 PF01928 CYTH domain WM2015_148 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_148 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM2015_1480 PF01968 Hydantoinase/oxoprolinase WM2015_1480 PF02538 WM2015_1480 WM2015_1480 PF05378 WM2015_1480 WM2015_1481 PF04087 WM2015_1481 WM2015_1482 PF00107 Zinc-binding dehydrogenase WM2015_1482 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1484 PF06167 Glucose-regulated metallo-peptidase M90 WM2015_1485 PF00501 AMP-binding enzyme WM2015_1486 PF08818 Domain of unknown function (DU1801) WM2015_1487 PF01546 Peptidase family M20/M25/M40 WM2015_1487 PF07687 Peptidase dimerisation domain WM2015_1488 PF13621 Cupin-like domain WM2015_149 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain WM2015_149 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WM2015_1490 PF00535 Glycosyl transferase family 2 WM2015_1491 PF04055 Radical SAM superfamily WM2015_1491 PF12345 WM2015_1491 WM2015_1492 PF04116 WM2015_1492 WM2015_1493 PF13520 Amino acid permease WM2015_1494 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) WM2015_1497 PF00005 ABC transporter WM2015_1497 PF12848 ABC transporter WM2015_1497 PF16326 WM2015_1497 WM2015_1498 PF00122 E1-E2 ATPase WM2015_1498 PF00689 Cation transporting ATPase, C-terminus WM2015_1498 PF00690 Cation transporter/ATPase, N-terminus WM2015_1498 PF00702 haloacid dehalogenase-like hydrolase WM2015_15 PF08003 Protein of unknown function (DUF1698) WM2015_150 PF00082 Subtilase family WM2015_150 PF01483 Proprotein convertase P-domain WM2015_150 PF02225 PA domain WM2015_150 PF16640 WM2015_150 WM2015_1500 PF03572 Peptidase family S41 WM2015_1501 PF00486 Transcriptional regulatory protein, C terminal WM2015_1501 PF13432 Tetratricopeptide repeat WM2015_1503 PF00270 DEAD/DEAH box helicase WM2015_1503 PF00271 Helicase conserved C-terminal domain WM2015_1503 PF02559 CarD-like/TRCF domain WM2015_1503 PF03461 TRCF domain WM2015_1504 PF13641 Glycosyltransferase like family 2 WM2015_1505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_1506 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain WM2015_1507 PF00579 tRNA synthetases class I (W and Y) WM2015_1508 PF01557 Fumarylacetoacetate (FAA) hydrolase family WM2015_151 PF12973 ChrR Cupin-like domain WM2015_1510 PF01963 WM2015_1510 WM2015_1511 PF03412 Peptidase C39 family WM2015_1512 PF08443 RimK-like ATP-grasp domain WM2015_1512 PF14401 WM2015_1512 WM2015_1513 PF04107 Glutamate-cysteine ligase family 2(GCS2) WM2015_1515 PF00521 DNA gyrase/topoisomerase IV, subunit A WM2015_1515 PF03989 DNA gyrase C-terminal domain, beta-propeller WM2015_1517 PF00246 Zinc carboxypeptidase WM2015_1518 PF00082 Subtilase family WM2015_1519 PF03572 Peptidase family S41 WM2015_1519 PF07676 WD40-like Beta Propeller Repeat WM2015_1519 PF14684 Tricorn protease C1 domain WM2015_1519 PF14685 Tricorn protease PDZ domain WM2015_152 PF11948 WM2015_152 WM2015_1520 PF02347 Glycine cleavage system P-protein WM2015_1521 PF01040 UbiA prenyltransferase family WM2015_1522 PF02628 WM2015_1522 WM2015_1524 PF02104 WM2015_1524 WM2015_1525 PF11137 WM2015_1525 WM2015_1526 PF08534 Redoxin WM2015_1527 PF00072 Response regulator receiver domain WM2015_1528 PF00107 Zinc-binding dehydrogenase WM2015_1528 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1529 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_1529 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_1530 PF00364 Biotin-requiring enzyme WM2015_1530 PF02817 e3 binding domain WM2015_1531 PF00676 Dehydrogenase E1 component WM2015_1531 PF02779 Transketolase, pyrimidine binding domain WM2015_1531 PF16078 WM2015_1531 WM2015_1531 PF16870 WM2015_1531 WM2015_1532 PF08007 Cupin superfamily protein WM2015_1533 PF00206 Lyase WM2015_1533 PF08328 Adenylosuccinate lyase C-terminal WM2015_1534 PF02525 Flavodoxin-like fold WM2015_1535 PF00795 Carbon-nitrogen hydrolase WM2015_1536 PF04371 Porphyromonas-type peptidyl-arginine deiminase WM2015_1538 PF00106 short chain dehydrogenase WM2015_1539 PF03193 Protein of unknown function, DUF258 WM2015_154 PF01171 PP-loop family WM2015_1540 PF00929 Exonuclease WM2015_1541 PF00391 PEP-utilising enzyme, mobile domain WM2015_1541 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WM2015_1541 PF02896 PEP-utilising enzyme, TIM barrel domain WM2015_1542 PF03618 WM2015_1542 WM2015_1543 PF06853 WM2015_1543 WM2015_1544 PF00117 Glutamine amidotransferase class-I WM2015_1544 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WM2015_1545 PF02142 MGS-like domain WM2015_1545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_1545 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WM2015_1546 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_1546 PF03449 Transcription elongation factor, N-terminal WM2015_1548 PF01368 DHH family WM2015_1548 PF02272 DHHA1 domain WM2015_1549 PF00334 Nucleoside diphosphate kinase WM2015_155 PF04325 Protein of unknown function (DUF465) WM2015_1550 PF04055 Radical SAM superfamily WM2015_1551 PF13432 Tetratricopeptide repeat WM2015_1551 PF14559 Tetratricopeptide repeat WM2015_1552 PF13413 Helix-turn-helix domain WM2015_1552 PF13464 WM2015_1552 WM2015_1553 PF03129 Anticodon binding domain WM2015_1553 PF13393 Histidyl-tRNA synthetase WM2015_1554 PF09976 Tetratricopeptide repeat WM2015_1555 PF13360 PQQ-like domain WM2015_1556 PF01926 50S ribosome-binding GTPase WM2015_1556 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WM2015_1557 PF00255 Glutathione peroxidase WM2015_1558 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WM2015_1558 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WM2015_1559 PF16811 WM2015_1559 WM2015_156 PF01553 Acyltransferase WM2015_1560 PF03480 Bacterial extracellular solute-binding protein, family 7 WM2015_1561 PF04290 WM2015_1561 WM2015_1562 PF06808 WM2015_1562 WM2015_1563 PF00108 Thiolase, N-terminal domain WM2015_1563 PF02803 Thiolase, C-terminal domain WM2015_1564 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_1564 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM2015_1564 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM2015_1565 PF02545 Maf-like protein WM2015_1566 PF02620 WM2015_1566 WM2015_1567 PF01783 Ribosomal L32p protein family WM2015_1568 PF02504 Fatty acid synthesis protein WM2015_1569 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM2015_1569 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM2015_157 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WM2015_1570 PF00698 Acyl transferase domain WM2015_1571 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_1572 PF00550 Phosphopantetheine attachment site WM2015_1573 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_1573 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_1574 PF00425 chorismate binding enzyme WM2015_1574 PF04715 Anthranilate synthase component I, N terminal region WM2015_1575 PF01063 Aminotransferase class IV WM2015_1576 PF02618 YceG-like family WM2015_1577 PF02223 Thymidylate kinase WM2015_1578 PF13177 DNA polymerase III, delta subunit WM2015_1579 PF07238 PilZ domain WM2015_158 PF00561 alpha/beta hydrolase fold WM2015_1580 PF00817 impB/mucB/samB family WM2015_1580 PF11798 IMS family HHH motif WM2015_1580 PF11799 impB/mucB/samB family C-terminal domain WM2015_1581 PF00501 AMP-binding enzyme WM2015_1581 PF13193 AMP-binding enzyme C-terminal domain WM2015_1582 PF00571 CBS domain WM2015_1584 PF00270 DEAD/DEAH box helicase WM2015_1584 PF00271 Helicase conserved C-terminal domain WM2015_1584 PF08494 WM2015_1584 WM2015_1585 PF00510 Cytochrome c oxidase subunit III WM2015_1586 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WM2015_1588 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_1589 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WM2015_1589 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WM2015_1589 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_159 PF00580 UvrD/REP helicase N-terminal domain WM2015_159 PF13361 UvrD-like helicase C-terminal domain WM2015_1590 PF10003 WM2015_1590 WM2015_1591 PF00171 Aldehyde dehydrogenase family WM2015_1591 PF01619 Proline dehydrogenase WM2015_1591 PF14850 DNA-binding domain of Proline dehydrogenase WM2015_1592 PF01471 Putative peptidoglycan binding domain WM2015_1592 PF13401 AAA domain WM2015_1593 PF16537 WM2015_1593 WM2015_1594 PF01694 Rhomboid family WM2015_1595 PF08850 WM2015_1595 WM2015_1596 PF03806 WM2015_1596 WM2015_1597 PF04748 Divergent polysaccharide deacetylase WM2015_1598 PF00595 PDZ domain (Also known as DHR or GLGF) WM2015_1598 PF03572 Peptidase family S41 WM2015_1599 PF01551 Peptidase family M23 WM2015_16 PF13649 Methyltransferase domain WM2015_160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WM2015_160 PF02843 Phosphoribosylglycinamide synthetase, C domain WM2015_160 PF02844 Phosphoribosylglycinamide synthetase, N domain WM2015_1600 PF01676 Metalloenzyme superfamily WM2015_1600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WM2015_1601 PF00581 Rhodanese-like domain WM2015_1602 PF02556 Preprotein translocase subunit SecB WM2015_1603 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WM2015_1603 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WM2015_1604 PF00588 SpoU rRNA Methylase family WM2015_1605 PF00317 Ribonucleotide reductase, all-alpha domain WM2015_1605 PF02867 Ribonucleotide reductase, barrel domain WM2015_161 PF01808 AICARFT/IMPCHase bienzyme WM2015_161 PF02142 MGS-like domain WM2015_1611 PF00196 Bacterial regulatory proteins, luxR family WM2015_1616 PF14347 WM2015_1616 WM2015_1617 PF01594 WM2015_1617 WM2015_1618 PF03993 WM2015_1618 WM2015_1619 PF03553 WM2015_1619 WM2015_162 PF02954 Bacterial regulatory protein, Fis family WM2015_1620 PF01336 OB-fold nucleic acid binding domain WM2015_1620 PF02811 PHP domain WM2015_1620 PF07733 Bacterial DNA polymerase III alpha subunit WM2015_1620 PF14579 Helix-hairpin-helix motif WM2015_1621 PF01479 S4 domain WM2015_1622 PF00520 Ion transport protein WM2015_1623 PF00183 Hsp90 protein WM2015_1623 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1624 PF03571 Peptidase family M49 WM2015_1625 PF01551 Peptidase family M23 WM2015_1626 PF14539 Domain of unknown function (DUF4442) WM2015_1627 PF01245 Ribosomal protein L19 WM2015_1628 PF01746 tRNA (Guanine-1)-methyltransferase WM2015_1629 PF01782 RimM N-terminal domain WM2015_1629 PF05239 PRC-barrel domain WM2015_163 PF11906 WM2015_163 WM2015_163 PF13717 WM2015_163 WM2015_1630 PF00886 Ribosomal protein S16 WM2015_1631 PF07394 WM2015_1631 WM2015_1632 PF08811 WM2015_1632 WM2015_1633 PF01019 Gamma-glutamyltranspeptidase WM2015_1634 PF01467 Cytidylyltransferase WM2015_1635 PF03602 Conserved hypothetical protein 95 WM2015_1636 PF00448 SRP54-type protein, GTPase domain WM2015_1636 PF02881 SRP54-type protein, helical bundle domain WM2015_1637 PF00633 Helix-hairpin-helix motif WM2015_1637 PF00730 HhH-GPD superfamily base excision DNA repair protein WM2015_1637 PF14815 NUDIX domain WM2015_1638 PF00072 Response regulator receiver domain WM2015_1638 PF00196 Bacterial regulatory proteins, luxR family WM2015_1639 PF07730 Histidine kinase WM2015_164 PF13511 WM2015_164 WM2015_1641 PF04362 Bacterial Fe(2+) trafficking WM2015_1643 PF13847 Methyltransferase domain WM2015_1644 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_1644 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1644 PF09335 WM2015_1644 WM2015_1645 PF01121 Dephospho-CoA kinase WM2015_1646 PF00582 Universal stress protein family WM2015_1647 PF00533 BRCA1 C Terminus (BRCT) domain WM2015_1647 PF01653 NAD-dependent DNA ligase adenylation domain WM2015_1647 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WM2015_1647 PF03120 NAD-dependent DNA ligase OB-fold domain WM2015_1647 PF12826 Helix-hairpin-helix motif WM2015_1647 PF14520 Helix-hairpin-helix domain WM2015_1648 PF04354 ZipA, C-terminal FtsZ-binding domain WM2015_1649 PF02463 RecF/RecN/SMC N terminal domain WM2015_165 PF00156 Phosphoribosyl transferase domain WM2015_1650 PF14489 QueF-like protein WM2015_1651 PF13145 PPIC-type PPIASE domain WM2015_1652 PF01722 BolA-like protein WM2015_1653 PF03795 YCII-related domain WM2015_1654 PF02616 ScpA/B protein WM2015_1655 PF04079 Putative transcriptional regulators (Ypuh-like) WM2015_1656 PF00849 RNA pseudouridylate synthase WM2015_1657 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM2015_1658 PF00588 SpoU rRNA Methylase family WM2015_1658 PF08032 RNA 2'-O ribose methyltransferase substrate binding WM2015_1659 PF00575 S1 RNA binding domain WM2015_1659 PF00773 RNB domain WM2015_1659 PF08206 Ribonuclease B OB domain WM2015_166 PF00005 ABC transporter WM2015_1660 PF01464 Transglycosylase SLT domain WM2015_1660 PF01476 LysM domain WM2015_1661 PF01551 Peptidase family M23 WM2015_1663 PF02649 Type I GTP cyclohydrolase folE2 WM2015_1664 PF13411 MerR HTH family regulatory protein WM2015_1665 PF00216 Bacterial DNA-binding protein WM2015_1666 PF01588 Putative tRNA binding domain WM2015_1666 PF03147 Ferredoxin-fold anticodon binding domain WM2015_1666 PF03483 B3/4 domain WM2015_1666 PF03484 tRNA synthetase B5 domain WM2015_1667 PF01409 tRNA synthetases class II core domain (F) WM2015_1667 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WM2015_1668 PF00453 Ribosomal protein L20 WM2015_1669 PF01632 Ribosomal protein L35 WM2015_167 PF02687 WM2015_167 WM2015_1670 PF00707 Translation initiation factor IF-3, C-terminal domain WM2015_1670 PF05198 Translation initiation factor IF-3, N-terminal domain WM2015_1671 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_1671 PF02824 TGS domain WM2015_1671 PF03129 Anticodon binding domain WM2015_1671 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM2015_1672 PF10972 WM2015_1672 WM2015_1675 PF02321 Outer membrane efflux protein WM2015_1676 PF16576 WM2015_1676 WM2015_1677 PF00873 AcrB/AcrD/AcrF family WM2015_1678 PF07311 Dodecin WM2015_1679 PF13091 PLD-like domain WM2015_168 PF13437 HlyD family secretion protein WM2015_1682 PF00270 DEAD/DEAH box helicase WM2015_1682 PF00271 Helicase conserved C-terminal domain WM2015_1683 PF05724 Thiopurine S-methyltransferase (TPMT) WM2015_1684 PF00873 AcrB/AcrD/AcrF family WM2015_1685 PF13533 Biotin-lipoyl like WM2015_1686 PF00571 CBS domain WM2015_1686 PF01595 WM2015_1686 WM2015_1687 PF00009 Elongation factor Tu GTP binding domain WM2015_1687 PF00679 Elongation factor G C-terminus WM2015_1687 PF03764 Elongation factor G, domain IV WM2015_1687 PF14492 Elongation Factor G, domain II WM2015_1688 PF05433 WM2015_1688 WM2015_1689 PF03061 Thioesterase superfamily WM2015_169 PF13432 Tetratricopeptide repeat WM2015_169 PF13469 Sulfotransferase family WM2015_169 PF14559 Tetratricopeptide repeat WM2015_1690 PF00326 Prolyl oligopeptidase family WM2015_1691 PF01565 FAD binding domain WM2015_1691 PF02913 FAD linked oxidases, C-terminal domain WM2015_1692 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM2015_1692 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM2015_1693 PF14542 GCN5-related N-acetyl-transferase WM2015_1694 PF00202 Aminotransferase class-III WM2015_1695 PF07728 AAA domain (dynein-related subfamily) WM2015_1696 PF00437 Type II/IV secretion system protein WM2015_1696 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) WM2015_1696 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_1697 PF01230 HIT domain WM2015_1698 PF00106 short chain dehydrogenase WM2015_1699 PF09723 WM2015_1699 WM2015_17 PF00209 Sodium:neurotransmitter symporter family WM2015_170 PF03372 Endonuclease/Exonuclease/phosphatase family WM2015_1700 PF03843 WM2015_1700 WM2015_1701 PF00494 Squalene/phytoene synthase WM2015_1702 PF01430 Hsp33 protein WM2015_1703 PF13419 Haloacid dehalogenase-like hydrolase WM2015_1704 PF13489 Methyltransferase domain WM2015_1705 PF01979 Amidohydrolase family WM2015_1706 PF01132 Elongation factor P (EF-P) OB domain WM2015_1706 PF08207 Elongation factor P (EF-P) KOW-like domain WM2015_1706 PF09285 Elongation factor P, C-terminal WM2015_1707 PF04055 Radical SAM superfamily WM2015_1707 PF13353 4Fe-4S single cluster domain WM2015_1708 PF00563 EAL domain WM2015_1708 PF00990 GGDEF domain WM2015_1708 PF13188 PAS domain WM2015_1709 PF01435 Peptidase family M48 WM2015_1710 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_1711 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WM2015_1712 PF01171 PP-loop family WM2015_1712 PF09179 TilS substrate binding domain WM2015_1712 PF11734 TilS substrate C-terminal domain WM2015_1714 PF13532 2OG-Fe(II) oxygenase superfamily WM2015_1715 PF01355 High potential iron-sulfur protein WM2015_1716 PF03739 WM2015_1716 WM2015_1717 PF03739 WM2015_1717 WM2015_1718 PF12804 MobA-like NTP transferase domain WM2015_172 PF16261 WM2015_172 WM2015_1720 PF00501 AMP-binding enzyme WM2015_1720 PF14535 AMP-binding enzyme C-terminal domain WM2015_1721 PF13460 NADH(P)-binding WM2015_1722 PF00550 Phosphopantetheine attachment site WM2015_1723 PF00155 Aminotransferase class I and II WM2015_1724 PF00719 Inorganic pyrophosphatase WM2015_1727 PF00316 Fructose-1-6-bisphosphatase WM2015_1728 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WM2015_1728 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WM2015_1729 PF01979 Amidohydrolase family WM2015_1730 PF03109 WM2015_1730 WM2015_1731 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_1734 PF07995 Glucose / Sorbosone dehydrogenase WM2015_1735 PF06295 WM2015_1735 WM2015_1737 PF00583 Acetyltransferase (GNAT) family WM2015_1737 PF00795 Carbon-nitrogen hydrolase WM2015_1738 PF00534 Glycosyl transferases group 1 WM2015_1738 PF13439 Glycosyltransferase Family 4 WM2015_1740 PF01205 Uncharacterized protein family UPF0029 WM2015_1741 PF03171 2OG-Fe(II) oxygenase superfamily WM2015_1741 PF14226 non-haem dioxygenase in morphine synthesis N-terminal WM2015_1742 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_1742 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_1742 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_1742 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_1743 PF00809 Pterin binding enzyme WM2015_1745 PF01728 FtsJ-like methyltransferase WM2015_1746 PF01985 CRS1 / YhbY (CRM) domain WM2015_1747 PF04430 Protein of unknown function (DUF498/DUF598) WM2015_1748 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1748 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1749 PF03061 Thioesterase superfamily WM2015_1750 PF02627 Carboxymuconolactone decarboxylase family WM2015_1751 PF00578 AhpC/TSA family WM2015_1752 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_1752 PF03466 LysR substrate binding domain WM2015_1753 PF14238 WM2015_1753 WM2015_1754 PF09822 WM2015_1754 WM2015_1755 PF12679 WM2015_1755 WM2015_1756 PF00005 ABC transporter WM2015_1757 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WM2015_1759 PF04367 WM2015_1759 WM2015_1760 PF13469 Sulfotransferase family WM2015_1762 PF12710 haloacid dehalogenase-like hydrolase WM2015_1763 PF02348 Cytidylyltransferase WM2015_1764 PF00682 HMGL-like WM2015_1765 PF00285 Citrate synthase WM2015_1766 PF13714 Phosphoenolpyruvate phosphomutase WM2015_1767 PF01266 FAD dependent oxidoreductase WM2015_1768 PF00351 Biopterin-dependent aromatic amino acid hydroxylase WM2015_1769 PF01329 Pterin 4 alpha carbinolamine dehydratase WM2015_177 PF03702 Uncharacterised protein family (UPF0075) WM2015_1770 PF07726 ATPase family associated with various cellular activities (AAA) WM2015_1771 PF01882 WM2015_1771 WM2015_1772 PF01841 Transglutaminase-like superfamily WM2015_1772 PF11992 WM2015_1772 WM2015_1772 PF13559 WM2015_1772 WM2015_1773 PF00717 Peptidase S24-like WM2015_1773 PF01726 LexA DNA binding domain WM2015_1774 PF00795 Carbon-nitrogen hydrolase WM2015_1775 PF04305 WM2015_1775 WM2015_1776 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_178 PF01551 Peptidase family M23 WM2015_178 PF04225 Opacity-associated protein A LysM-like domain WM2015_1781 PF01625 Peptide methionine sulfoxide reductase WM2015_1783 PF00817 impB/mucB/samB family WM2015_1784 PF00072 Response regulator receiver domain WM2015_1784 PF00990 GGDEF domain WM2015_1785 PF00742 Homoserine dehydrogenase WM2015_1785 PF03447 Homoserine dehydrogenase, NAD binding domain WM2015_1786 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_1787 PF00561 alpha/beta hydrolase fold WM2015_1788 PF00498 FHA domain WM2015_1789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_1789 PF03466 LysR substrate binding domain WM2015_179 PF00579 tRNA synthetases class I (W and Y) WM2015_179 PF01479 S4 domain WM2015_1790 PF13419 Haloacid dehalogenase-like hydrolase WM2015_1792 PF00578 AhpC/TSA family WM2015_1793 PF01734 Patatin-like phospholipase WM2015_1794 PF00106 short chain dehydrogenase WM2015_1794 PF07993 Male sterility protein WM2015_1795 PF00887 Acyl CoA binding protein WM2015_1796 PF00440 Bacterial regulatory proteins, tetR family WM2015_1796 PF13972 Bacterial transcriptional repressor WM2015_1797 PF05597 WM2015_1797 WM2015_1799 PF03007 WM2015_1799 WM2015_1799 PF06974 WM2015_1799 WM2015_18 PF10986 WM2015_18 WM2015_180 PF12007 Protein of unknown function (DUF3501) WM2015_1801 PF01804 Penicillin amidase WM2015_1802 PF03301 Tryptophan 2,3-dioxygenase WM2015_1803 PF00676 Dehydrogenase E1 component WM2015_1804 PF02779 Transketolase, pyrimidine binding domain WM2015_1804 PF02780 Transketolase, C-terminal domain WM2015_1805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_1805 PF00364 Biotin-requiring enzyme WM2015_1805 PF02817 e3 binding domain WM2015_1806 PF05618 Putative ATP-dependant zinc protease WM2015_1807 PF08443 RimK-like ATP-grasp domain WM2015_1808 PF04922 WM2015_1808 WM2015_1809 PF03937 Flavinator of succinate dehydrogenase WM2015_181 PF02754 WM2015_181 WM2015_1810 PF13085 2Fe-2S iron-sulfur cluster binding domain WM2015_1810 PF13534 4Fe-4S dicluster domain WM2015_1811 PF00890 FAD binding domain WM2015_1811 PF02910 Fumarate reductase flavoprotein C-term WM2015_1812 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM2015_1813 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM2015_1814 PF07896 Protein of unknown function (DUF1674) WM2015_1816 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WM2015_1818 PF01066 CDP-alcohol phosphatidyltransferase WM2015_1819 PF01541 GIY-YIG catalytic domain WM2015_1819 PF02151 UvrB/uvrC motif WM2015_1819 PF08459 UvrC Helix-hairpin-helix N-terminal WM2015_1819 PF14520 Helix-hairpin-helix domain WM2015_182 PF02915 Rubrerythrin WM2015_1820 PF01451 Low molecular weight phosphotyrosine protein phosphatase WM2015_1821 PF02348 Cytidylyltransferase WM2015_1822 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WM2015_1823 PF00005 ABC transporter WM2015_1823 PF00664 ABC transporter transmembrane region WM2015_1824 PF02472 Biopolymer transport protein ExbD/TolR WM2015_1825 PF01618 WM2015_1825 WM2015_1826 PF03772 WM2015_1826 WM2015_1826 PF13567 WM2015_1826 WM2015_1827 PF00005 ABC transporter WM2015_1828 PF02687 WM2015_1828 WM2015_1828 PF12704 MacB-like periplasmic core domain WM2015_1829 PF00849 RNA pseudouridylate synthase WM2015_1829 PF01479 S4 domain WM2015_183 PF13396 WM2015_183 WM2015_1830 PF00575 S1 RNA binding domain WM2015_1830 PF10150 Ribonuclease E/G family WM2015_1831 PF01113 Dihydrodipicolinate reductase, N-terminus WM2015_1831 PF05173 Dihydrodipicolinate reductase, C-terminus WM2015_1832 PF00226 DnaJ domain WM2015_1832 PF00684 DnaJ central domain WM2015_1832 PF01556 DnaJ C terminal domain WM2015_1833 PF00012 Hsp70 protein WM2015_1834 PF01025 GrpE WM2015_1835 PF02463 RecF/RecN/SMC N terminal domain WM2015_1836 PF01475 Ferric uptake regulator family WM2015_1837 PF04355 SmpA / OmlA family WM2015_1838 PF03658 RnfH family Ubiquitin WM2015_1839 PF03364 Polyketide cyclase / dehydrase and lipid transport WM2015_184 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM2015_184 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM2015_1840 PF01668 SmpB protein WM2015_1841 PF00589 Phage integrase family WM2015_1841 PF13356 Domain of unknown function (DUF4102) WM2015_1842 PF13276 WM2015_1842 WM2015_1842 PF13683 WM2015_1842 WM2015_1843 PF01527 Transposase WM2015_1845 PF00122 E1-E2 ATPase WM2015_1845 PF00689 Cation transporting ATPase, C-terminus WM2015_1845 PF00690 Cation transporter/ATPase, N-terminus WM2015_1845 PF00702 haloacid dehalogenase-like hydrolase WM2015_1846 PF13649 Methyltransferase domain WM2015_1847 PF13230 Glutamine amidotransferases class-II WM2015_1848 PF07386 WM2015_1848 WM2015_1849 PF02367 Uncharacterised P-loop hydrolase UPF0079 WM2015_185 PF00764 Arginosuccinate synthase WM2015_1850 PF01256 Carbohydrate kinase WM2015_1850 PF03853 YjeF-related protein N-terminus WM2015_1851 PF08331 WM2015_1851 WM2015_1851 PF13484 WM2015_1851 WM2015_1852 PF00202 Aminotransferase class-III WM2015_1854 PF01895 PhoU domain WM2015_1855 PF00005 ABC transporter WM2015_1856 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_1857 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_1858 PF12849 PBP superfamily domain WM2015_186 PF01546 Peptidase family M20/M25/M40 WM2015_186 PF07687 Peptidase dimerisation domain WM2015_1860 PF00593 TonB dependent receptor WM2015_1860 PF07715 TonB-dependent Receptor Plug Domain WM2015_1860 PF13620 Carboxypeptidase regulatory-like domain WM2015_1861 PF13432 Tetratricopeptide repeat WM2015_1861 PF14559 Tetratricopeptide repeat WM2015_1862 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_1863 PF02472 Biopolymer transport protein ExbD/TolR WM2015_1864 PF01618 WM2015_1864 WM2015_1865 PF01618 WM2015_1865 WM2015_1866 PF11932 WM2015_1866 WM2015_1867 PF00512 His Kinase A (phospho-acceptor) domain WM2015_1867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1867 PF11808 WM2015_1867 WM2015_1868 PF00072 Response regulator receiver domain WM2015_1868 PF00486 Transcriptional regulatory protein, C terminal WM2015_1869 PF08279 HTH domain WM2015_1869 PF13280 WM2015_1869 WM2015_187 PF00696 Amino acid kinase family WM2015_187 PF04768 Protein of unknown function (DUF619) WM2015_1870 PF01475 Ferric uptake regulator family WM2015_1871 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_1872 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_1872 PF01464 Transglycosylase SLT domain WM2015_1873 PF00929 Exonuclease WM2015_1874 PF00075 RNase H WM2015_1876 PF00753 Metallo-beta-lactamase superfamily WM2015_1876 PF16123 WM2015_1876 WM2015_1877 PF13688 Metallo-peptidase family M12 WM2015_188 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM2015_188 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM2015_1880 PF00535 Glycosyl transferase family 2 WM2015_1882 PF13489 Methyltransferase domain WM2015_1884 PF00114 Pilin (bacterial filament) WM2015_1884 PF07963 Prokaryotic N-terminal methylation motif WM2015_1885 PF00114 Pilin (bacterial filament) WM2015_1885 PF07963 Prokaryotic N-terminal methylation motif WM2015_1886 PF00437 Type II/IV secretion system protein WM2015_1886 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_1887 PF00482 Type II secretion system (T2SS), protein F WM2015_1888 PF01478 Type IV leader peptidase family WM2015_1888 PF06750 WM2015_1888 WM2015_1889 PF00072 Response regulator receiver domain WM2015_1889 PF00486 Transcriptional regulatory protein, C terminal WM2015_189 PF00206 Lyase WM2015_1890 PF00884 Sulfatase WM2015_1891 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_1891 PF07497 Rho termination factor, RNA-binding domain WM2015_1891 PF07498 Rho termination factor, N-terminal domain WM2015_1892 PF00085 Thioredoxin WM2015_1893 PF00270 DEAD/DEAH box helicase WM2015_1893 PF00271 Helicase conserved C-terminal domain WM2015_1894 PF11356 Type IV pilus biogenesis WM2015_1895 PF00263 WM2015_1895 WM2015_1895 PF03958 Bacterial type II/III secretion system short domain WM2015_1896 PF00437 Type II/IV secretion system protein WM2015_1896 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_1897 PF00482 Type II secretion system (T2SS), protein F WM2015_1899 PF00005 ABC transporter WM2015_19 PF00005 ABC transporter WM2015_190 PF00578 AhpC/TSA family WM2015_1901 PF00293 NUDIX domain WM2015_1902 PF00288 GHMP kinases N terminal domain WM2015_1902 PF00368 Hydroxymethylglutaryl-coenzyme A reductase WM2015_1902 PF08544 GHMP kinases C terminal WM2015_1903 PF00288 GHMP kinases N terminal domain WM2015_1904 PF00288 GHMP kinases N terminal domain WM2015_1905 PF00512 His Kinase A (phospho-acceptor) domain WM2015_1905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1906 PF02353 Mycolic acid cyclopropane synthetase WM2015_1907 PF11086 WM2015_1907 WM2015_1908 PF02353 Mycolic acid cyclopropane synthetase WM2015_1909 PF07103 WM2015_1909 WM2015_191 PF00375 Sodium:dicarboxylate symporter family WM2015_1910 PF13450 NAD(P)-binding Rossmann-like domain WM2015_1911 PF00487 WM2015_1911 WM2015_1912 PF07963 Prokaryotic N-terminal methylation motif WM2015_1912 PF12019 Type II transport protein GspH WM2015_1913 PF00440 Bacterial regulatory proteins, tetR family WM2015_1914 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1914 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1914 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_1914 PF09317 WM2015_1914 WM2015_1915 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_1915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM2015_1915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM2015_1916 PF00108 Thiolase, N-terminal domain WM2015_1916 PF02803 Thiolase, C-terminal domain WM2015_1917 PF03703 WM2015_1917 WM2015_1918 PF03703 WM2015_1918 WM2015_1919 PF01636 Phosphotransferase enzyme family WM2015_192 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_192 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WM2015_1920 PF00069 Protein kinase domain WM2015_1920 PF13424 Tetratricopeptide repeat WM2015_1921 PF07638 ECF sigma factor WM2015_1923 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_1923 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_1923 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_1924 PF06241 WM2015_1924 WM2015_1925 PF13622 Thioesterase-like superfamily WM2015_1927 PF00009 Elongation factor Tu GTP binding domain WM2015_1927 PF00679 Elongation factor G C-terminus WM2015_1927 PF03144 Elongation factor Tu domain 2 WM2015_1928 PF07219 WM2015_1928 WM2015_1928 PF13181 Tetratricopeptide repeat WM2015_1929 PF04375 WM2015_1929 WM2015_193 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_1930 PF02602 Uroporphyrinogen-III synthase HemD WM2015_1931 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WM2015_1931 PF03900 Porphobilinogen deaminase, C-terminal domain WM2015_1932 PF00072 Response regulator receiver domain WM2015_1932 PF04397 LytTr DNA-binding domain WM2015_1933 PF02230 Phospholipase/Carboxylesterase WM2015_1935 PF13489 Methyltransferase domain WM2015_1936 PF01678 Diaminopimelate epimerase WM2015_1937 PF04340 Protein of unknown function, DUF484 WM2015_1938 PF00589 Phage integrase family WM2015_1938 PF02899 Phage integrase, N-terminal SAM-like domain WM2015_1939 PF00227 Proteasome subunit WM2015_194 PF04519 WM2015_194 WM2015_1940 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_1940 PF07724 AAA domain (Cdc48 subfamily) WM2015_1940 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_1941 PF00005 ABC transporter WM2015_1942 PF02405 WM2015_1942 WM2015_1943 PF02470 WM2015_1943 WM2015_1944 PF05494 Toluene tolerance, Ttg2 WM2015_1945 PF13466 STAS domain WM2015_1946 PF04333 WM2015_1946 WM2015_1947 PF00563 EAL domain WM2015_1947 PF00990 GGDEF domain WM2015_1947 PF08447 PAS fold WM2015_1947 PF08448 PAS fold WM2015_1948 PF01022 Bacterial regulatory protein, arsR family WM2015_1948 PF08241 Methyltransferase domain WM2015_1949 PF02574 Homocysteine S-methyltransferase WM2015_1950 PF00809 Pterin binding enzyme WM2015_1950 PF02310 B12 binding domain WM2015_1950 PF02607 B12 binding domain WM2015_1950 PF02965 Vitamin B12 dependent methionine synthase, activation domain WM2015_1951 PF09831 WM2015_1951 WM2015_1952 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_1952 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_1954 PF00392 Bacterial regulatory proteins, gntR family WM2015_1955 PF00005 ABC transporter WM2015_1957 PF00563 EAL domain WM2015_1958 PF01979 Amidohydrolase family WM2015_1959 PF01979 Amidohydrolase family WM2015_196 PF01741 Large-conductance mechanosensitive channel, MscL WM2015_1960 PF01979 Amidohydrolase family WM2015_1961 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM2015_1962 PF13091 PLD-like domain WM2015_1963 PF00107 Zinc-binding dehydrogenase WM2015_1963 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_1964 PF00756 Putative esterase WM2015_1965 PF00271 Helicase conserved C-terminal domain WM2015_1965 PF02151 UvrB/uvrC motif WM2015_1965 PF04851 Type III restriction enzyme, res subunit WM2015_1965 PF12344 Ultra-violet resistance protein B WM2015_1966 PF00155 Aminotransferase class I and II WM2015_1968 PF00795 Carbon-nitrogen hydrolase WM2015_1968 PF02540 NAD synthase WM2015_1969 PF00549 CoA-ligase WM2015_1969 PF02629 CoA binding domain WM2015_197 PF00593 TonB dependent receptor WM2015_197 PF07715 TonB-dependent Receptor Plug Domain WM2015_1970 PF00549 CoA-ligase WM2015_1970 PF08442 ATP-grasp domain WM2015_1971 PF00512 His Kinase A (phospho-acceptor) domain WM2015_1971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_1972 PF00072 Response regulator receiver domain WM2015_1972 PF00158 Sigma-54 interaction domain WM2015_1972 PF02954 Bacterial regulatory protein, Fis family WM2015_1974 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_1974 PF12867 DinB superfamily WM2015_1975 PF10017 WM2015_1975 WM2015_1977 PF00056 lactate/malate dehydrogenase, NAD binding domain WM2015_1977 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WM2015_1978 PF01474 Class-II DAHP synthetase family WM2015_1979 PF02600 Disulfide bond formation protein DsbB WM2015_1980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_1981 PF00171 Aldehyde dehydrogenase family WM2015_1982 PF07799 WM2015_1982 WM2015_1983 PF00144 Beta-lactamase WM2015_1984 PF00781 Diacylglycerol kinase catalytic domain WM2015_1985 PF00593 TonB dependent receptor WM2015_1985 PF07715 TonB-dependent Receptor Plug Domain WM2015_1986 PF10636 Hemin uptake protein hemP WM2015_1989 PF13088 BNR repeat-like domain WM2015_199 PF07813 LTXXQ motif family protein WM2015_1990 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM2015_1991 PF00300 Histidine phosphatase superfamily (branch 1) WM2015_1992 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WM2015_1992 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_1993 PF07995 Glucose / Sorbosone dehydrogenase WM2015_1994 PF01018 GTP1/OBG WM2015_1994 PF01926 50S ribosome-binding GTPase WM2015_1995 PF01016 Ribosomal L27 protein WM2015_1996 PF00829 Ribosomal prokaryotic L21 protein WM2015_1997 PF13432 Tetratricopeptide repeat WM2015_1997 PF13469 Sulfotransferase family WM2015_1997 PF14559 Tetratricopeptide repeat WM2015_1998 PF00005 ABC transporter WM2015_1999 PF02517 CAAX protease self-immunity WM2015_2 PF00712 DNA polymerase III beta subunit, N-terminal domain WM2015_2 PF02767 DNA polymerase III beta subunit, central domain WM2015_2 PF02768 DNA polymerase III beta subunit, C-terminal domain WM2015_20 PF02687 WM2015_20 WM2015_20 PF12704 MacB-like periplasmic core domain WM2015_200 PF00512 His Kinase A (phospho-acceptor) domain WM2015_200 PF00672 HAMP domain WM2015_200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2000 PF13279 Thioesterase-like superfamily WM2015_2002 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_2003 PF04314 Protein of unknown function (DUF461) WM2015_2004 PF00999 Sodium/hydrogen exchanger family WM2015_2004 PF02080 TrkA-C domain WM2015_2005 PF00293 NUDIX domain WM2015_2006 PF06945 WM2015_2006 WM2015_2007 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_2007 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_2008 PF04012 WM2015_2008 WM2015_2009 PF06667 WM2015_2009 WM2015_201 PF00072 Response regulator receiver domain WM2015_201 PF00486 Transcriptional regulatory protein, C terminal WM2015_2010 PF04024 WM2015_2010 WM2015_2012 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_2015 PF07920 Protein of unknown function (DUF1684) WM2015_2016 PF00483 Nucleotidyl transferase WM2015_2016 PF01050 Mannose-6-phosphate isomerase WM2015_2017 PF04321 RmlD substrate binding domain WM2015_2018 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WM2015_2019 PF00483 Nucleotidyl transferase WM2015_202 PF05721 Phytanoyl-CoA dioxygenase (PhyH) WM2015_2020 PF16363 WM2015_2020 WM2015_2021 PF00436 Single-strand binding protein family WM2015_2022 PF00348 Polyprenyl synthetase WM2015_2023 PF08245 Mur ligase middle domain WM2015_2025 PF01594 WM2015_2025 WM2015_2027 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_2028 PF00462 Glutaredoxin WM2015_2029 PF04358 DsrC like protein WM2015_203 PF00326 Prolyl oligopeptidase family WM2015_203 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_203 PF07676 WD40-like Beta Propeller Repeat WM2015_2030 PF02635 DsrE/DsrF-like family WM2015_2031 PF01435 Peptidase family M48 WM2015_2031 PF14559 Tetratricopeptide repeat WM2015_2032 PF02503 Polyphosphate kinase middle domain WM2015_2032 PF13089 Polyphosphate kinase N-terminal domain WM2015_2032 PF13090 Polyphosphate kinase C-terminal domain WM2015_2033 PF02541 Ppx/GppA phosphatase family WM2015_2034 PF00152 tRNA synthetases class II (D, K and N) WM2015_2036 PF02557 D-alanyl-D-alanine carboxypeptidase WM2015_2037 PF00875 DNA photolyase WM2015_2037 PF03441 FAD binding domain of DNA photolyase WM2015_2038 PF06078 Bacterial protein of unknown function (DUF937) WM2015_2039 PF13522 Glutamine amidotransferase domain WM2015_204 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ WM2015_2040 PF02674 WM2015_2040 WM2015_2041 PF05036 Sporulation related domain WM2015_2042 PF08245 Mur ligase middle domain WM2015_2043 PF01039 Carboxyl transferase domain WM2015_2044 PF00290 Tryptophan synthase alpha chain WM2015_2045 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_2046 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WM2015_2047 PF01416 tRNA pseudouridine synthase WM2015_2049 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM2015_2049 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM2015_205 PF16576 WM2015_205 WM2015_2050 PF01264 Chorismate synthase WM2015_2051 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase WM2015_2051 PF13450 NAD(P)-binding Rossmann-like domain WM2015_2052 PF13472 GDSL-like Lipase/Acylhydrolase family WM2015_2053 PF00005 ABC transporter WM2015_2055 PF01554 MatE WM2015_2056 PF05960 Bacterial protein of unknown function (DUF885) WM2015_2058 PF00578 AhpC/TSA family WM2015_2059 PF12680 SnoaL-like domain WM2015_206 PF00873 AcrB/AcrD/AcrF family WM2015_2060 PF16036 WM2015_2060 WM2015_2061 PF01292 Prokaryotic cytochrome b561 WM2015_2063 PF02537 WM2015_2063 WM2015_2064 PF01432 Peptidase family M3 WM2015_2065 PF00448 SRP54-type protein, GTPase domain WM2015_2065 PF02881 SRP54-type protein, helical bundle domain WM2015_2065 PF02978 Signal peptide binding domain WM2015_2066 PF01578 WM2015_2066 WM2015_2067 PF00571 CBS domain WM2015_2067 PF01595 WM2015_2067 WM2015_2067 PF03471 Transporter associated domain WM2015_2069 PF00072 Response regulator receiver domain WM2015_2069 PF01627 Hpt domain WM2015_207 PF03073 TspO/MBR family WM2015_2070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WM2015_2071 PF02565 Recombination protein O C terminal WM2015_2071 PF11967 Recombination protein O N terminal WM2015_2072 PF01926 50S ribosome-binding GTPase WM2015_2072 PF07650 KH domain WM2015_2073 PF00035 Double-stranded RNA binding motif WM2015_2073 PF14622 Ribonuclease-III-like WM2015_2074 PF16137 WM2015_2074 WM2015_2075 PF00717 Peptidase S24-like WM2015_2075 PF10502 Signal peptidase, peptidase S26 WM2015_2076 PF00009 Elongation factor Tu GTP binding domain WM2015_2076 PF00679 Elongation factor G C-terminus WM2015_2076 PF03144 Elongation factor Tu domain 2 WM2015_2076 PF06421 GTP-binding protein LepA C-terminus WM2015_2077 PF13180 PDZ domain WM2015_2077 PF13365 Trypsin-like peptidase domain WM2015_2078 PF04246 WM2015_2078 WM2015_2079 PF03888 MucB/RseB family WM2015_2079 PF17188 WM2015_2079 WM2015_208 PF01738 Dienelactone hydrolase family WM2015_2080 PF03872 Anti sigma-E protein RseA, N-terminal domain WM2015_2081 PF04542 Sigma-70 region 2 WM2015_2081 PF08281 Sigma-70, region 4 WM2015_2082 PF00171 Aldehyde dehydrogenase family WM2015_2083 PF01180 Dihydroorotate dehydrogenase WM2015_2084 PF01565 FAD binding domain WM2015_2084 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WM2015_2085 PF13354 Beta-lactamase enzyme family WM2015_2086 PF00140 Sigma-70 factor, region 1 WM2015_2086 PF04542 Sigma-70 region 2 WM2015_2086 PF04545 Sigma-70, region 4 WM2015_2087 PF00326 Prolyl oligopeptidase family WM2015_2087 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM2015_2088 PF01048 Phosphorylase superfamily WM2015_2089 PF03601 WM2015_2089 WM2015_2090 PF00696 Amino acid kinase family WM2015_2090 PF00742 Homoserine dehydrogenase WM2015_2090 PF03447 Homoserine dehydrogenase, NAD binding domain WM2015_2090 PF13840 ACT domain WM2015_2091 PF00288 GHMP kinases N terminal domain WM2015_2091 PF08544 GHMP kinases C terminal WM2015_2092 PF04402 Protein of unknown function (DUF541) WM2015_2093 PF00122 E1-E2 ATPase WM2015_2093 PF00702 haloacid dehalogenase-like hydrolase WM2015_2095 PF13548 WM2015_2095 WM2015_2096 PF01292 Prokaryotic cytochrome b561 WM2015_2097 PF00196 Bacterial regulatory proteins, luxR family WM2015_2098 PF00756 Putative esterase WM2015_2099 PF00484 Carbonic anhydrase WM2015_21 PF11736 Protein of unknown function (DUF3299) WM2015_210 PF00144 Beta-lactamase WM2015_2100 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_2100 PF14821 Threonine synthase N terminus WM2015_2102 PF12146 Putative lysophospholipase WM2015_2103 PF09862 WM2015_2103 WM2015_2105 PF07298 WM2015_2105 WM2015_2106 PF01175 Urocanase WM2015_2106 PF17391 WM2015_2106 WM2015_2106 PF17392 WM2015_2106 WM2015_2107 PF09002 Domain of unknown function (DUF1887) WM2015_2108 PF00069 Protein kinase domain WM2015_2108 PF13181 Tetratricopeptide repeat WM2015_2108 PF13424 Tetratricopeptide repeat WM2015_2108 PF13432 Tetratricopeptide repeat WM2015_2109 PF07638 ECF sigma factor WM2015_211 PF13432 Tetratricopeptide repeat WM2015_2111 PF00221 Aromatic amino acid lyase WM2015_2112 PF01979 Amidohydrolase family WM2015_2113 PF06808 WM2015_2113 WM2015_2114 PF16868 WM2015_2114 WM2015_2116 PF02355 Protein export membrane protein WM2015_2116 PF07549 SecD/SecF GG Motif WM2015_2117 PF02355 Protein export membrane protein WM2015_2117 PF07549 SecD/SecF GG Motif WM2015_2117 PF13721 SecD export protein N-terminal TM region WM2015_2118 PF02699 Preprotein translocase subunit WM2015_2119 PF03160 Calx-beta domain WM2015_2119 PF10282 Lactonase, 7-bladed beta-propeller WM2015_212 PF00043 Glutathione S-transferase, C-terminal domain WM2015_212 PF02798 Glutathione S-transferase, N-terminal domain WM2015_2122 PF13145 PPIC-type PPIASE domain WM2015_2123 PF01345 WM2015_2123 WM2015_2123 PF10282 Lactonase, 7-bladed beta-propeller WM2015_2124 PF00069 Protein kinase domain WM2015_2124 PF13176 Tetratricopeptide repeat WM2015_2124 PF13424 Tetratricopeptide repeat WM2015_2125 PF07638 ECF sigma factor WM2015_2126 PF01702 Queuine tRNA-ribosyltransferase WM2015_2127 PF02547 Queuosine biosynthesis protein WM2015_2128 PF04909 Amidohydrolase WM2015_2129 PF04199 Putative cyclase WM2015_2130 PF00266 Aminotransferase class-V WM2015_2131 PF01494 FAD binding domain WM2015_2133 PF13231 WM2015_2133 WM2015_2134 PF00535 Glycosyl transferase family 2 WM2015_2135 PF00082 Subtilase family WM2015_2135 PF02225 PA domain WM2015_2135 PF05922 Peptidase inhibitor I9 WM2015_2136 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_2136 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_2137 PF00005 ABC transporter WM2015_2138 PF03379 WM2015_2138 WM2015_2139 PF01578 WM2015_2139 WM2015_214 PF01638 HxlR-like helix-turn-helix WM2015_2140 PF04995 WM2015_2140 WM2015_2141 PF03100 CcmE WM2015_2142 PF01578 WM2015_2142 WM2015_2142 PF16327 WM2015_2142 WM2015_2143 PF08534 Redoxin WM2015_2144 PF03918 Cytochrome C biogenesis protein WM2015_2145 PF13181 Tetratricopeptide repeat WM2015_2146 PF01865 Protein of unknown function DUF47 WM2015_2147 PF01384 WM2015_2147 WM2015_2148 PF05402 Coenzyme PQQ synthesis protein D (PqqD) WM2015_2151 PF03023 WM2015_2151 WM2015_2152 PF01649 Ribosomal protein S20 WM2015_2153 PF00582 Universal stress protein family WM2015_2154 PF01464 Transglycosylase SLT domain WM2015_2154 PF13511 WM2015_2154 WM2015_2155 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_2156 PF00300 Histidine phosphatase superfamily (branch 1) WM2015_2157 PF00929 Exonuclease WM2015_2157 PF08411 Exonuclease C-terminal WM2015_2159 PF12836 Helix-hairpin-helix motif WM2015_216 PF00069 Protein kinase domain WM2015_216 PF13181 Tetratricopeptide repeat WM2015_216 PF13424 Tetratricopeptide repeat WM2015_2160 PF02132 RecR protein WM2015_2160 PF13662 Toprim domain WM2015_2161 PF02575 YbaB/EbfC DNA-binding family WM2015_2162 PF12169 DNA polymerase III subunits gamma and tau domain III WM2015_2162 PF12170 DNA polymerase III tau subunit V interacting with alpha WM2015_2162 PF13177 DNA polymerase III, delta subunit WM2015_2163 PF00082 Subtilase family WM2015_2163 PF04151 Bacterial pre-peptidase C-terminal domain WM2015_2164 PF01546 Peptidase family M20/M25/M40 WM2015_2164 PF07687 Peptidase dimerisation domain WM2015_2165 PF04011 LemA family WM2015_2166 PF09972 WM2015_2166 WM2015_2167 PF00155 Aminotransferase class I and II WM2015_2169 PF02810 SEC-C motif WM2015_2169 PF03695 Uncharacterised protein family (UPF0149) WM2015_217 PF07638 ECF sigma factor WM2015_2170 PF00311 Phosphoenolpyruvate carboxylase WM2015_2172 PF03795 YCII-related domain WM2015_2173 PF00472 RF-1 domain WM2015_2174 PF15780 WM2015_2174 WM2015_2176 PF01019 Gamma-glutamyltranspeptidase WM2015_2177 PF07969 Amidohydrolase family WM2015_2178 PF02321 Outer membrane efflux protein WM2015_2179 PF16576 WM2015_2179 WM2015_218 PF13229 Right handed beta helix region WM2015_2180 PF00873 AcrB/AcrD/AcrF family WM2015_2182 PF05076 Suppressor of fused protein (SUFU) WM2015_2183 PF14024 WM2015_2183 WM2015_2186 PF17164 WM2015_2186 WM2015_2187 PF12625 WM2015_2187 WM2015_2187 PF12833 Helix-turn-helix domain WM2015_2188 PF05368 NmrA-like family WM2015_2189 PF07366 SnoaL-like polyketide cyclase WM2015_219 PF00563 EAL domain WM2015_219 PF00672 HAMP domain WM2015_219 PF00990 GGDEF domain WM2015_219 PF17203 WM2015_219 WM2015_2190 PF00144 Beta-lactamase WM2015_2194 PF02810 SEC-C motif WM2015_2196 PF02567 Phenazine biosynthesis-like protein WM2015_2197 PF02639 WM2015_2197 WM2015_2198 PF01546 Peptidase family M20/M25/M40 WM2015_2198 PF07687 Peptidase dimerisation domain WM2015_2199 PF00474 Sodium:solute symporter family WM2015_22 PF00326 Prolyl oligopeptidase family WM2015_22 PF07676 WD40-like Beta Propeller Repeat WM2015_220 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WM2015_2201 PF06738 WM2015_2201 WM2015_2201 PF12821 WM2015_2201 WM2015_2202 PF09650 WM2015_2202 WM2015_2203 PF13698 WM2015_2203 WM2015_2204 PF00108 Thiolase, N-terminal domain WM2015_2204 PF02803 Thiolase, C-terminal domain WM2015_2205 PF00682 HMGL-like WM2015_2206 PF13366 WM2015_2206 WM2015_2207 PF00106 short chain dehydrogenase WM2015_2209 PF00924 Mechanosensitive ion channel WM2015_2209 PF05552 Conserved TM helix WM2015_221 PF04055 Radical SAM superfamily WM2015_2210 PF01936 NYN domain WM2015_2211 PF05728 Uncharacterised protein family (UPF0227) WM2015_2212 PF00501 AMP-binding enzyme WM2015_2212 PF13193 AMP-binding enzyme C-terminal domain WM2015_2212 PF16177 WM2015_2212 WM2015_2213 PF00873 AcrB/AcrD/AcrF family WM2015_2215 PF00583 Acetyltransferase (GNAT) family WM2015_2216 PF09834 WM2015_2216 WM2015_2218 PF00069 Protein kinase domain WM2015_2218 PF00672 HAMP domain WM2015_2218 PF14827 Sensory domain of two-component sensor kinase WM2015_222 PF07209 WM2015_222 WM2015_2220 PF00766 Electron transfer flavoprotein FAD-binding domain WM2015_2220 PF01012 Electron transfer flavoprotein domain WM2015_2221 PF01012 Electron transfer flavoprotein domain WM2015_2222 PF05175 Methyltransferase small domain WM2015_2223 PF02630 SCO1/SenC WM2015_2224 PF02666 WM2015_2224 WM2015_2227 PF04298 WM2015_2227 WM2015_2228 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM2015_2229 PF04348 LppC putative lipoprotein WM2015_223 PF00378 Enoyl-CoA hydratase/isomerase family WM2015_2230 PF02021 Uncharacterised protein family UPF0102 WM2015_2231 PF04972 BON domain WM2015_2232 PF04608 Phosphatidylglycerophosphatase A WM2015_2233 PF00586 AIR synthase related protein, N-terminal domain WM2015_2233 PF02769 AIR synthase related protein, C-terminal domain WM2015_2234 PF01029 NusB family WM2015_2235 PF00885 6,7-dimethyl-8-ribityllumazine synthase WM2015_2236 PF00925 GTP cyclohydrolase II WM2015_2236 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WM2015_2237 PF00677 Lumazine binding domain WM2015_2238 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM2015_2238 PF01872 RibD C-terminal domain WM2015_2239 PF03477 ATP cone domain WM2015_224 PF01564 Spermine/spermidine synthase WM2015_2240 PF00464 Serine hydroxymethyltransferase WM2015_2241 PF03259 Roadblock/LC7 domain WM2015_2243 PF00005 ABC transporter WM2015_2243 PF00782 Dual specificity phosphatase, catalytic domain WM2015_2244 PF03029 Conserved hypothetical ATP binding protein WM2015_2246 PF00196 Bacterial regulatory proteins, luxR family WM2015_2247 PF00487 WM2015_2247 WM2015_2248 PF12625 WM2015_2248 WM2015_2248 PF12833 Helix-turn-helix domain WM2015_2249 PF07603 WM2015_2249 WM2015_225 PF00294 pfkB family carbohydrate kinase WM2015_2250 PF02357 Transcription termination factor nusG WM2015_2251 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_2251 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_2251 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_2251 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_2252 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WM2015_2253 PF01370 NAD dependent epimerase/dehydratase family WM2015_2254 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WM2015_2254 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WM2015_2254 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WM2015_2256 PF00583 Acetyltransferase (GNAT) family WM2015_2257 PF05960 Bacterial protein of unknown function (DUF885) WM2015_2258 PF03006 WM2015_2258 WM2015_2259 PF04366 WM2015_2259 WM2015_226 PF06723 MreB/Mbl protein WM2015_2260 PF00005 ABC transporter WM2015_2260 PF00664 ABC transporter transmembrane region WM2015_2261 PF00892 EamA-like transporter family WM2015_2262 PF05170 WM2015_2262 WM2015_2262 PF13502 WM2015_2262 WM2015_2263 PF01196 Ribosomal protein L17 WM2015_2264 PF01000 RNA polymerase Rpb3/RpoA insert domain WM2015_2264 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WM2015_2264 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WM2015_2265 PF00163 Ribosomal protein S4/S9 N-terminal domain WM2015_2265 PF01479 S4 domain WM2015_2266 PF00411 Ribosomal protein S11 WM2015_2267 PF00416 Ribosomal protein S13/S18 WM2015_2268 PF00444 Ribosomal protein L36 WM2015_2269 PF00344 SecY translocase WM2015_227 PF04085 rod shape-determining protein MreC WM2015_2270 PF00828 Ribosomal protein L18e/L15 WM2015_2271 PF00327 Ribosomal protein L30p/L7e WM2015_2272 PF00333 Ribosomal protein S5, N-terminal domain WM2015_2272 PF03719 Ribosomal protein S5, C-terminal domain WM2015_2273 PF00861 Ribosomal L18p/L5e family WM2015_2274 PF00347 Ribosomal protein L6 WM2015_2275 PF00410 Ribosomal protein S8 WM2015_2276 PF00253 Ribosomal protein S14p/S29e WM2015_2277 PF00281 Ribosomal protein L5 WM2015_2277 PF00673 ribosomal L5P family C-terminus WM2015_2278 PF00467 KOW motif WM2015_2278 PF17136 WM2015_2278 WM2015_2279 PF00238 Ribosomal protein L14p/L23e WM2015_228 PF04093 WM2015_228 WM2015_2280 PF00366 Ribosomal protein S17 WM2015_2281 PF00831 Ribosomal L29 protein WM2015_2282 PF00252 Ribosomal protein L16p/L10e WM2015_2283 PF00189 Ribosomal protein S3, C-terminal domain WM2015_2283 PF07650 KH domain WM2015_2284 PF00237 Ribosomal protein L22p/L17e WM2015_2285 PF00203 Ribosomal protein S19 WM2015_2286 PF00181 Ribosomal Proteins L2, RNA binding domain WM2015_2286 PF03947 Ribosomal Proteins L2, C-terminal domain WM2015_2287 PF00276 Ribosomal protein L23 WM2015_2288 PF00573 Ribosomal protein L4/L1 family WM2015_2289 PF00297 Ribosomal protein L3 WM2015_229 PF00905 Penicillin binding protein transpeptidase domain WM2015_229 PF03717 Penicillin-binding Protein dimerisation domain WM2015_2290 PF00338 Ribosomal protein S10p/S20e WM2015_2291 PF00009 Elongation factor Tu GTP binding domain WM2015_2291 PF03143 Elongation factor Tu C-terminal domain WM2015_2291 PF03144 Elongation factor Tu domain 2 WM2015_2292 PF00009 Elongation factor Tu GTP binding domain WM2015_2292 PF00679 Elongation factor G C-terminus WM2015_2292 PF03144 Elongation factor Tu domain 2 WM2015_2292 PF03764 Elongation factor G, domain IV WM2015_2292 PF14492 Elongation Factor G, domain II WM2015_2293 PF00177 Ribosomal protein S7p/S5e WM2015_2294 PF00164 Ribosomal protein S12/S23 WM2015_2296 PF07676 WD40-like Beta Propeller Repeat WM2015_2297 PF01345 WM2015_2297 WM2015_2297 PF02225 PA domain WM2015_2297 PF04389 Peptidase family M28 WM2015_2298 PF12680 SnoaL-like domain WM2015_23 PF01928 CYTH domain WM2015_230 PF01098 WM2015_230 WM2015_2302 PF00623 RNA polymerase Rpb1, domain 2 WM2015_2302 PF04983 RNA polymerase Rpb1, domain 3 WM2015_2302 PF04997 RNA polymerase Rpb1, domain 1 WM2015_2302 PF04998 RNA polymerase Rpb1, domain 5 WM2015_2302 PF05000 RNA polymerase Rpb1, domain 4 WM2015_2303 PF00562 RNA polymerase Rpb2, domain 6 WM2015_2303 PF04560 RNA polymerase Rpb2, domain 7 WM2015_2303 PF04561 RNA polymerase Rpb2, domain 2 WM2015_2303 PF04563 RNA polymerase beta subunit WM2015_2303 PF04565 RNA polymerase Rpb2, domain 3 WM2015_2303 PF10385 RNA polymerase beta subunit external 1 domain WM2015_2304 PF00542 Ribosomal protein L7/L12 C-terminal domain WM2015_2304 PF16320 WM2015_2304 WM2015_2305 PF00466 Ribosomal protein L10 WM2015_2306 PF00687 Ribosomal protein L1p/L10e family WM2015_2307 PF00298 Ribosomal protein L11, RNA binding domain WM2015_2307 PF03946 Ribosomal protein L11, N-terminal domain WM2015_2308 PF00467 KOW motif WM2015_2308 PF02357 Transcription termination factor nusG WM2015_2309 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WM2015_231 PF13406 Transglycosylase SLT domain WM2015_2310 PF00009 Elongation factor Tu GTP binding domain WM2015_2310 PF03143 Elongation factor Tu C-terminal domain WM2015_2310 PF03144 Elongation factor Tu domain 2 WM2015_2311 PF01926 50S ribosome-binding GTPase WM2015_2311 PF06071 Protein of unknown function (DUF933) WM2015_2312 PF01195 Peptidyl-tRNA hydrolase WM2015_2313 PF01386 Ribosomal L25p family WM2015_2313 PF14693 Ribosomal protein TL5, C-terminal domain WM2015_2314 PF01027 Inhibitor of apoptosis-promoting Bax1 WM2015_2315 PF01266 FAD dependent oxidoreductase WM2015_2316 PF01252 WM2015_2316 WM2015_2317 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_2317 PF06827 Zinc finger found in FPG and IleRS WM2015_2317 PF08264 Anticodon-binding domain of tRNA WM2015_2318 PF01687 Riboflavin kinase WM2015_2318 PF06574 FAD synthetase WM2015_2319 PF03692 WM2015_2319 WM2015_232 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel WM2015_232 PF05036 Sporulation related domain WM2015_2321 PF10605 WM2015_2321 WM2015_2322 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_2323 PF00072 Response regulator receiver domain WM2015_2323 PF00196 Bacterial regulatory proteins, luxR family WM2015_2324 PF05048 Periplasmic copper-binding protein (NosD) WM2015_2324 PF13229 Right handed beta helix region WM2015_2325 PF07638 ECF sigma factor WM2015_2326 PF00069 Protein kinase domain WM2015_2326 PF13424 Tetratricopeptide repeat WM2015_2327 PF00246 Zinc carboxypeptidase WM2015_2328 PF00849 RNA pseudouridylate synthase WM2015_2329 PF12802 MarR family WM2015_233 PF00768 D-alanyl-D-alanine carboxypeptidase WM2015_233 PF07943 Penicillin-binding protein 5, C-terminal domain WM2015_2330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_2330 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal WM2015_2331 PF04209 homogentisate 1,2-dioxygenase WM2015_2332 PF01557 Fumarylacetoacetate (FAA) hydrolase family WM2015_2333 PF00892 EamA-like transporter family WM2015_2336 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2336 PF00672 HAMP domain WM2015_2336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2337 PF00072 Response regulator receiver domain WM2015_2337 PF00486 Transcriptional regulatory protein, C terminal WM2015_2338 PF01965 DJ-1/PfpI family WM2015_2338 PF13428 Tetratricopeptide repeat WM2015_234 PF04359 Protein of unknown function (DUF493) WM2015_2340 PF13622 Thioesterase-like superfamily WM2015_2344 PF13417 Glutathione S-transferase, N-terminal domain WM2015_2345 PF14346 Domain of unknown function (DUF4398) WM2015_2346 PF00691 OmpA family WM2015_2346 PF14346 Domain of unknown function (DUF4398) WM2015_2347 PF04325 Protein of unknown function (DUF465) WM2015_2348 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_2348 PF00571 CBS domain WM2015_2349 PF03806 WM2015_2349 WM2015_235 PF03099 Biotin/lipoate A/B protein ligase family WM2015_2350 PF06155 Protein of unknown function (DUF971) WM2015_2351 PF01209 ubiE/COQ5 methyltransferase family WM2015_2352 PF02036 SCP-2 sterol transfer family WM2015_2353 PF03109 WM2015_2353 WM2015_2355 PF01648 4'-phosphopantetheinyl transferase superfamily WM2015_2356 PF00293 NUDIX domain WM2015_2356 PF02581 Thiamine monophosphate synthase/TENI WM2015_2357 PF01043 SecA preprotein cross-linking domain WM2015_2357 PF02810 SEC-C motif WM2015_2357 PF07516 SecA Wing and Scaffold domain WM2015_2357 PF07517 SecA DEAD-like domain WM2015_2358 PF05258 WM2015_2358 WM2015_2359 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WM2015_236 PF00595 PDZ domain (Also known as DHR or GLGF) WM2015_236 PF03572 Peptidase family S41 WM2015_236 PF11818 WM2015_236 WM2015_2360 PF00091 Tubulin/FtsZ family, GTPase domain WM2015_2360 PF12327 FtsZ family, C-terminal domain WM2015_2361 PF02491 SHS2 domain inserted in FTSA WM2015_2361 PF14450 Cell division protein FtsA WM2015_2363 PF01820 D-ala D-ala ligase N-terminus WM2015_2363 PF07478 D-ala D-ala ligase C-terminus WM2015_2364 PF01225 Mur ligase family, catalytic domain WM2015_2364 PF02875 Mur ligase family, glutamate ligase domain WM2015_2364 PF08245 Mur ligase middle domain WM2015_2365 PF03033 Glycosyltransferase family 28 N-terminal domain WM2015_2365 PF04101 Glycosyltransferase family 28 C-terminal domain WM2015_2366 PF01098 WM2015_2366 WM2015_2367 PF00953 Glycosyl transferase family 4 WM2015_2367 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WM2015_2368 PF01225 Mur ligase family, catalytic domain WM2015_2368 PF02875 Mur ligase family, glutamate ligase domain WM2015_2368 PF08245 Mur ligase middle domain WM2015_2369 PF01225 Mur ligase family, catalytic domain WM2015_2369 PF02875 Mur ligase family, glutamate ligase domain WM2015_2369 PF08245 Mur ligase middle domain WM2015_237 PF00270 DEAD/DEAH box helicase WM2015_2370 PF00905 Penicillin binding protein transpeptidase domain WM2015_2370 PF03717 Penicillin-binding Protein dimerisation domain WM2015_2371 PF04999 WM2015_2371 WM2015_2372 PF01795 MraW methylase family WM2015_2373 PF02381 MraZ protein WM2015_2375 PF03641 Possible lysine decarboxylase WM2015_2375 PF11892 Domain of unknown function (DUF3412) WM2015_2375 PF14793 Domain of unknown function (DUF4478) WM2015_2376 PF13620 Carboxypeptidase regulatory-like domain WM2015_2379 PF05496 Holliday junction DNA helicase ruvB N-terminus WM2015_2379 PF12002 MgsA AAA+ ATPase C terminal WM2015_2379 PF16193 WM2015_2379 WM2015_2380 PF01345 WM2015_2380 WM2015_2380 PF01364 Peptidase family C25 WM2015_2382 PF00733 Asparagine synthase WM2015_2382 PF13537 Glutamine amidotransferase domain WM2015_2383 PF13471 WM2015_2383 WM2015_2384 PF14907 Uncharacterised nucleotidyltransferase WM2015_2385 PF00005 ABC transporter WM2015_2386 PF02698 DUF218 domain WM2015_2387 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WM2015_2388 PF00534 Glycosyl transferases group 1 WM2015_2388 PF13477 Glycosyl transferase 4-like WM2015_2389 PF04794 YdjC-like protein WM2015_239 PF01019 Gamma-glutamyltranspeptidase WM2015_2391 PF14897 WM2015_2391 WM2015_2392 PF13524 Glycosyl transferases group 1 WM2015_2393 PF13439 Glycosyltransferase Family 4 WM2015_2393 PF13692 Glycosyl transferases group 1 WM2015_2394 PF13692 Glycosyl transferases group 1 WM2015_2395 PF05050 Methyltransferase FkbM domain WM2015_2396 PF13440 WM2015_2396 WM2015_2397 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WM2015_2398 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_2398 PF05523 WxcM-like, C-terminal WM2015_2399 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_24 PF02690 WM2015_24 WM2015_240 PF01197 Ribosomal protein L31 WM2015_2401 PF02563 Polysaccharide biosynthesis/export protein WM2015_2401 PF10531 SLBB domain WM2015_2402 PF02706 Chain length determinant protein WM2015_2402 PF13614 AAA domain WM2015_2402 PF13807 WM2015_2402 WM2015_2405 PF01797 Transposase IS200 like WM2015_2406 PF00072 Response regulator receiver domain WM2015_2406 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2406 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2406 PF12860 WM2015_2406 WM2015_2407 PF00593 TonB dependent receptor WM2015_2407 PF07715 TonB-dependent Receptor Plug Domain WM2015_2408 PF02447 WM2015_2408 WM2015_241 PF01564 Spermine/spermidine synthase WM2015_2410 PF16697 WM2015_2410 WM2015_2411 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_2412 PF08014 WM2015_2412 WM2015_2413 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM2015_2413 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM2015_2414 PF00561 alpha/beta hydrolase fold WM2015_2415 PF00501 AMP-binding enzyme WM2015_2416 PF00953 Glycosyl transferase family 4 WM2015_2418 PF04932 WM2015_2418 WM2015_2419 PF01142 tRNA pseudouridine synthase D (TruD) WM2015_242 PF07963 Prokaryotic N-terminal methylation motif WM2015_242 PF12019 Type II transport protein GspH WM2015_2421 PF00486 Transcriptional regulatory protein, C terminal WM2015_2423 PF04977 Septum formation initiator WM2015_2424 PF01546 Peptidase family M20/M25/M40 WM2015_2424 PF07687 Peptidase dimerisation domain WM2015_2425 PF00459 Inositol monophosphatase family WM2015_2426 PF00588 SpoU rRNA Methylase family WM2015_2427 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM2015_2428 PF00391 PEP-utilising enzyme, mobile domain WM2015_2428 PF02896 PEP-utilising enzyme, TIM barrel domain WM2015_2428 PF05524 PEP-utilising enzyme, N-terminal WM2015_2429 PF00381 PTS HPr component phosphorylation site WM2015_243 PF07963 Prokaryotic N-terminal methylation motif WM2015_2430 PF03610 PTS system fructose IIA component WM2015_2431 PF03668 WM2015_2431 WM2015_2432 PF02603 HPr Serine kinase N terminus WM2015_2432 PF07475 HPr Serine kinase C-terminal domain WM2015_2433 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM2015_2434 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WM2015_2435 PF00309 WM2015_2435 WM2015_2435 PF04552 Sigma-54, DNA binding domain WM2015_2435 PF04963 Sigma-54 factor, core binding domain WM2015_2436 PF02627 Carboxymuconolactone decarboxylase family WM2015_2437 PF04306 WM2015_2437 WM2015_2438 PF02033 Ribosome-binding factor A WM2015_2439 PF00009 Elongation factor Tu GTP binding domain WM2015_2439 PF04760 Translation initiation factor IF-2, N-terminal region WM2015_2439 PF08364 WM2015_2439 WM2015_2439 PF11987 Translation-initiation factor 2 WM2015_244 PF07963 Prokaryotic N-terminal methylation motif WM2015_244 PF16074 WM2015_244 WM2015_2440 PF08529 NusA N-terminal domain WM2015_2440 PF13184 NusA-like KH domain WM2015_2440 PF14520 Helix-hairpin-helix domain WM2015_2441 PF02576 Uncharacterised BCR, YhbC family COG0779 WM2015_2441 PF17384 WM2015_2441 WM2015_2442 PF00326 Prolyl oligopeptidase family WM2015_2442 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_2442 PF07676 WD40-like Beta Propeller Repeat WM2015_2443 PF00106 short chain dehydrogenase WM2015_2445 PF03160 Calx-beta domain WM2015_2448 PF01483 Proprotein convertase P-domain WM2015_2448 PF17164 WM2015_2448 WM2015_2449 PF00158 Sigma-54 interaction domain WM2015_2449 PF02954 Bacterial regulatory protein, Fis family WM2015_2449 PF16697 WM2015_2449 WM2015_245 PF14341 WM2015_245 WM2015_2450 PF00069 Protein kinase domain WM2015_2450 PF13424 Tetratricopeptide repeat WM2015_2451 PF01592 NifU-like N terminal domain WM2015_2452 PF00266 Aminotransferase class-V WM2015_2453 PF01458 Uncharacterized protein family (UPF0051) WM2015_2454 PF00005 ABC transporter WM2015_2455 PF13366 WM2015_2455 WM2015_2456 PF01458 Uncharacterized protein family (UPF0051) WM2015_2457 PF02082 Transcriptional regulator WM2015_2458 PF14344 WM2015_2458 WM2015_2459 PF01636 Phosphotransferase enzyme family WM2015_246 PF05567 Neisseria PilC beta-propeller domain WM2015_2460 PF00483 Nucleotidyl transferase WM2015_2461 PF00245 Alkaline phosphatase WM2015_2463 PF00733 Asparagine synthase WM2015_2463 PF13537 Glutamine amidotransferase domain WM2015_2464 PF00308 Bacterial dnaA protein WM2015_2465 PF01066 CDP-alcohol phosphatidyltransferase WM2015_2466 PF09839 WM2015_2466 WM2015_2467 PF00586 AIR synthase related protein, N-terminal domain WM2015_2467 PF02769 AIR synthase related protein, C-terminal domain WM2015_2468 PF00551 Formyl transferase WM2015_2470 PF01435 Peptidase family M48 WM2015_2471 PF04542 Sigma-70 region 2 WM2015_2471 PF08281 Sigma-70, region 4 WM2015_2472 PF11859 WM2015_2472 WM2015_2473 PF01979 Amidohydrolase family WM2015_2474 PF01510 N-acetylmuramoyl-L-alanine amidase WM2015_2475 PF01433 Peptidase family M1 WM2015_2475 PF11940 Domain of unknown function (DUF3458) WM2015_2475 PF17432 WM2015_2475 WM2015_2476 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_2478 PF13185 GAF domain WM2015_2479 PF06080 WM2015_2479 WM2015_248 PF07963 Prokaryotic N-terminal methylation motif WM2015_248 PF16732 WM2015_248 WM2015_2480 PF01979 Amidohydrolase family WM2015_2481 PF05013 N-formylglutamate amidohydrolase WM2015_2483 PF00263 WM2015_2483 WM2015_2483 PF03958 Bacterial type II/III secretion system short domain WM2015_2483 PF07660 Secretin and TonB N terminus short domain WM2015_2483 PF11741 AMIN domain WM2015_2484 PF04351 Pilus assembly protein, PilP WM2015_2485 PF04350 Pilus assembly protein, PilO WM2015_2486 PF05137 WM2015_2486 WM2015_2487 PF11104 Type IV pilus assembly protein PilM; WM2015_2488 PF00905 Penicillin binding protein transpeptidase domain WM2015_2488 PF00912 Transglycosylase WM2015_2488 PF17092 WM2015_2488 WM2015_2491 PF14333 WM2015_2491 WM2015_2493 PF01134 Glucose inhibited division protein A WM2015_2493 PF13932 GidA associated domain 3 WM2015_2494 PF01235 WM2015_2494 WM2015_2495 PF04307 WM2015_2495 WM2015_2497 PF01343 Peptidase family S49 WM2015_2498 PF01554 MatE WM2015_25 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_250 PF07690 Major Facilitator Superfamily WM2015_2500 PF00069 Protein kinase domain WM2015_2500 PF13424 Tetratricopeptide repeat WM2015_2501 PF07638 ECF sigma factor WM2015_2502 PF00883 Cytosol aminopeptidase family, catalytic domain WM2015_2503 PF01292 Prokaryotic cytochrome b561 WM2015_2504 PF00072 Response regulator receiver domain WM2015_2504 PF00990 GGDEF domain WM2015_2505 PF03886 Protein of unknown function (DUF330) WM2015_2506 PF02470 WM2015_2506 WM2015_2507 PF00005 ABC transporter WM2015_2508 PF02405 WM2015_2508 WM2015_251 PF04055 Radical SAM superfamily WM2015_251 PF06969 HemN C-terminal domain WM2015_2510 PF00501 AMP-binding enzyme WM2015_2510 PF13193 AMP-binding enzyme C-terminal domain WM2015_2510 PF16177 WM2015_2510 WM2015_2511 PF00072 Response regulator receiver domain WM2015_2511 PF00196 Bacterial regulatory proteins, luxR family WM2015_2512 PF00246 Zinc carboxypeptidase WM2015_2513 PF01476 LysM domain WM2015_2513 PF04972 BON domain WM2015_2514 PF00072 Response regulator receiver domain WM2015_2514 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2514 PF12860 WM2015_2514 WM2015_2515 PF13937 WM2015_2515 WM2015_2516 PF00474 Sodium:solute symporter family WM2015_2519 PF11295 WM2015_2519 WM2015_252 PF01725 Ham1 family WM2015_2520 PF00929 Exonuclease WM2015_2521 PF00027 Cyclic nucleotide-binding domain WM2015_2521 PF00571 CBS domain WM2015_2521 PF03445 WM2015_2521 WM2015_2521 PF10335 WM2015_2521 WM2015_2522 PF00069 Protein kinase domain WM2015_2522 PF13424 Tetratricopeptide repeat WM2015_2524 PF14312 WM2015_2524 WM2015_2524 PF15780 WM2015_2524 WM2015_2528 PF14559 Tetratricopeptide repeat WM2015_2529 PF00563 EAL domain WM2015_2529 PF00990 GGDEF domain WM2015_253 PF01138 3' exoribonuclease family, domain 1 WM2015_253 PF03725 3' exoribonuclease family, domain 2 WM2015_2531 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_2532 PF04336 WM2015_2532 WM2015_2533 PF12146 Putative lysophospholipase WM2015_2534 PF03969 AFG1-like ATPase WM2015_2535 PF00440 Bacterial regulatory proteins, tetR family WM2015_2536 PF12146 Putative lysophospholipase WM2015_2537 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_2537 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_2537 PF09317 WM2015_2537 WM2015_2538 PF00593 TonB dependent receptor WM2015_2538 PF07715 TonB-dependent Receptor Plug Domain WM2015_2539 PF02424 ApbE family WM2015_254 PF03755 WM2015_254 WM2015_254 PF08340 WM2015_254 WM2015_2540 PF00990 GGDEF domain WM2015_2540 PF13424 Tetratricopeptide repeat WM2015_2541 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM2015_2542 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit WM2015_2543 PF00990 GGDEF domain WM2015_2545 PF04389 Peptidase family M28 WM2015_2546 PF00293 NUDIX domain WM2015_2547 PF01032 FecCD transport family WM2015_2548 PF00005 ABC transporter WM2015_2549 PF14403 WM2015_2549 WM2015_255 PF00625 Guanylate kinase WM2015_2550 PF04168 WM2015_2550 WM2015_2551 PF10005 WM2015_2551 WM2015_2551 PF15887 WM2015_2551 WM2015_2553 PF16576 WM2015_2553 WM2015_2554 PF00873 AcrB/AcrD/AcrF family WM2015_2555 PF00563 EAL domain WM2015_2555 PF00990 GGDEF domain WM2015_2556 PF01743 Poly A polymerase head domain WM2015_2556 PF01966 HD domain WM2015_2556 PF12627 Probable RNA and SrmB- binding site of polymerase A WM2015_2557 PF13460 NADH(P)-binding WM2015_2558 PF01464 Transglycosylase SLT domain WM2015_2558 PF14718 Soluble lytic murein transglycosylase L domain WM2015_2559 PF01925 WM2015_2559 WM2015_256 PF01192 RNA polymerase Rpb6 WM2015_2560 PF03372 Endonuclease/Exonuclease/phosphatase family WM2015_2561 PF01323 DSBA-like thioredoxin domain WM2015_2562 PF00034 Cytochrome c WM2015_2563 PF01926 50S ribosome-binding GTPase WM2015_2564 PF07238 PilZ domain WM2015_2565 PF01207 Dihydrouridine synthase (Dus) WM2015_2566 PF14559 Tetratricopeptide repeat WM2015_2567 PF00353 Hemolysin-type calcium-binding repeat (2 copies) WM2015_2568 PF02661 Fic/DOC family WM2015_257 PF02824 TGS domain WM2015_257 PF04607 Region found in RelA / SpoT proteins WM2015_257 PF13291 ACT domain WM2015_257 PF13328 HD domain WM2015_2570 PF13362 Toprim domain WM2015_2571 PF13148 WM2015_2571 WM2015_2573 PF01026 TatD related DNase WM2015_2574 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_2575 PF04304 WM2015_2575 WM2015_2576 PF05940 WM2015_2576 WM2015_2577 PF02082 Transcriptional regulator WM2015_2578 PF00487 WM2015_2578 WM2015_2579 PF09685 WM2015_2579 WM2015_2580 PF02472 Biopolymer transport protein ExbD/TolR WM2015_2581 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_2581 PF12804 MobA-like NTP transferase domain WM2015_2581 PF14602 Hexapeptide repeat of succinyl-transferase WM2015_2582 PF00476 DNA polymerase family A WM2015_2582 PF01367 5'-3' exonuclease, C-terminal SAM fold WM2015_2582 PF01612 3'-5' exonuclease WM2015_2582 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM2015_2583 PF11191 Protein of unknown function (DUF2782) WM2015_2584 PF00398 Ribosomal RNA adenine dimethylase WM2015_2585 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WM2015_2586 PF00639 PPIC-type PPIASE domain WM2015_2586 PF09312 SurA N-terminal domain WM2015_2587 PF04453 Organic solvent tolerance protein WM2015_2588 PF10023 WM2015_2588 WM2015_2589 PF13489 Methyltransferase domain WM2015_259 PF00270 DEAD/DEAH box helicase WM2015_259 PF00271 Helicase conserved C-terminal domain WM2015_259 PF17191 WM2015_259 WM2015_2590 PF00857 Isochorismatase family WM2015_2591 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_2592 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase WM2015_2595 PF00069 Protein kinase domain WM2015_2595 PF13424 Tetratricopeptide repeat WM2015_2596 PF04542 Sigma-70 region 2 WM2015_2596 PF08281 Sigma-70, region 4 WM2015_2597 PF02460 WM2015_2597 WM2015_2597 PF03176 MMPL family WM2015_2598 PF14870 Photosynthesis system II assembly factor YCF48 WM2015_2599 PF07044 Protein of unknown function (DUF1329) WM2015_26 PF00990 GGDEF domain WM2015_260 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_2600 PF06980 WM2015_2600 WM2015_2601 PF03403 Platelet-activating factor acetylhydrolase, isoform II WM2015_2601 PF12262 WM2015_2601 WM2015_2602 PF05960 Bacterial protein of unknown function (DUF885) WM2015_2603 PF01566 WM2015_2603 WM2015_2604 PF13432 Tetratricopeptide repeat WM2015_2605 PF07593 WM2015_2605 WM2015_2605 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_2606 PF02350 UDP-N-acetylglucosamine 2-epimerase WM2015_2608 PF07593 WM2015_2608 WM2015_2608 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_2609 PF13431 Tetratricopeptide repeat WM2015_2609 PF13432 Tetratricopeptide repeat WM2015_2609 PF13435 Cytochrome c554 and c-prime WM2015_261 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_261 PF03466 LysR substrate binding domain WM2015_2610 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_2611 PF00795 Carbon-nitrogen hydrolase WM2015_2612 PF13229 Right handed beta helix region WM2015_2613 PF00364 Biotin-requiring enzyme WM2015_2613 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_2613 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_2614 PF00069 Protein kinase domain WM2015_2614 PF13374 Tetratricopeptide repeat WM2015_2614 PF13424 Tetratricopeptide repeat WM2015_2615 PF07638 ECF sigma factor WM2015_2616 PF13975 WM2015_2616 WM2015_2617 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_2617 PF00364 Biotin-requiring enzyme WM2015_2617 PF02817 e3 binding domain WM2015_2618 PF00456 Transketolase, thiamine diphosphate binding domain WM2015_2619 PF04199 Putative cyclase WM2015_262 PF09955 WM2015_262 WM2015_2621 PF00390 Malic enzyme, N-terminal domain WM2015_2621 PF01515 Phosphate acetyl/butaryl transferase WM2015_2621 PF03949 Malic enzyme, NAD binding domain WM2015_2622 PF00274 Fructose-bisphosphate aldolase class-I WM2015_2623 PF00224 Pyruvate kinase, barrel domain WM2015_2623 PF02887 Pyruvate kinase, alpha/beta domain WM2015_2624 PF02798 Glutathione S-transferase, N-terminal domain WM2015_2624 PF13410 Glutathione S-transferase, C-terminal domain WM2015_2626 PF00932 Lamin Tail Domain WM2015_2626 PF04231 Endonuclease I WM2015_2627 PF01804 Penicillin amidase WM2015_2628 PF08808 WM2015_2628 WM2015_2629 PF09722 WM2015_2629 WM2015_263 PF00285 Citrate synthase WM2015_2630 PF01381 Helix-turn-helix WM2015_2632 PF08378 WM2015_2632 WM2015_2633 PF07411 Domain of unknown function (DUF1508) WM2015_2634 PF00144 Beta-lactamase WM2015_2639 PF04542 Sigma-70 region 2 WM2015_2639 PF08281 Sigma-70, region 4 WM2015_264 PF00106 short chain dehydrogenase WM2015_2641 PF14060 WM2015_2641 WM2015_2642 PF00990 GGDEF domain WM2015_2643 PF00535 Glycosyl transferase family 2 WM2015_2644 PF04138 WM2015_2644 WM2015_2645 PF04235 WM2015_2645 WM2015_2646 PF00144 Beta-lactamase WM2015_2647 PF01841 Transglutaminase-like superfamily WM2015_2647 PF13181 Tetratricopeptide repeat WM2015_2647 PF13432 Tetratricopeptide repeat WM2015_2649 PF01435 Peptidase family M48 WM2015_265 PF14067 WM2015_265 WM2015_2650 PF12730 WM2015_2650 WM2015_2651 PF00005 ABC transporter WM2015_2652 PF00990 GGDEF domain WM2015_2653 PF10026 WM2015_2653 WM2015_2654 PF01979 Amidohydrolase family WM2015_2655 PF04542 Sigma-70 region 2 WM2015_2655 PF08281 Sigma-70, region 4 WM2015_2658 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) WM2015_2659 PF04226 WM2015_2659 WM2015_266 PF02190 ATP-dependent protease La (LON) domain WM2015_2660 PF00730 HhH-GPD superfamily base excision DNA repair protein WM2015_2662 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal WM2015_2662 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal WM2015_2663 PF03621 MbtH-like protein WM2015_2664 PF00486 Transcriptional regulatory protein, C terminal WM2015_2664 PF13424 Tetratricopeptide repeat WM2015_2664 PF13432 Tetratricopeptide repeat WM2015_2667 PF13884 Chaperone of endosialidase WM2015_2668 PF00593 TonB dependent receptor WM2015_2668 PF07715 TonB-dependent Receptor Plug Domain WM2015_2669 PF00801 PKD domain WM2015_2669 PF13205 Bacterial Ig-like domain WM2015_267 PF01225 Mur ligase family, catalytic domain WM2015_267 PF02875 Mur ligase family, glutamate ligase domain WM2015_267 PF08245 Mur ligase middle domain WM2015_2672 PF08007 Cupin superfamily protein WM2015_2673 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) WM2015_2673 PF05139 Erythromycin esterase WM2015_2675 PF07386 WM2015_2675 WM2015_2677 PF00009 Elongation factor Tu GTP binding domain WM2015_2677 PF00679 Elongation factor G C-terminus WM2015_2677 PF03144 Elongation factor Tu domain 2 WM2015_2677 PF03764 Elongation factor G, domain IV WM2015_2677 PF14492 Elongation Factor G, domain II WM2015_2679 PF02256 Iron hydrogenase small subunit WM2015_2679 PF02906 Iron only hydrogenase large subunit, C-terminal domain WM2015_2679 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM2015_2679 PF12838 4Fe-4S dicluster domain WM2015_2679 PF13510 2Fe-2S iron-sulfur cluster binding domain WM2015_2680 PF09362 WM2015_2680 WM2015_2683 PF05345 Putative Ig domain WM2015_2683 PF08309 WM2015_2683 WM2015_2684 PF13419 Haloacid dehalogenase-like hydrolase WM2015_2685 PF12833 Helix-turn-helix domain WM2015_2686 PF00144 Beta-lactamase WM2015_2687 PF01541 GIY-YIG catalytic domain WM2015_2689 PF01553 Acyltransferase WM2015_269 PF01206 Sulfurtransferase TusA WM2015_2690 PF02566 OsmC-like protein WM2015_2690 PF02624 YcaO-like family WM2015_2691 PF02036 SCP-2 sterol transfer family WM2015_2692 PF13365 Trypsin-like peptidase domain WM2015_2693 PF00085 Thioredoxin WM2015_2695 PF00085 Thioredoxin WM2015_2696 PF13205 Bacterial Ig-like domain WM2015_2699 PF13683 WM2015_2699 WM2015_27 PF14329 WM2015_27 WM2015_270 PF00406 Adenylate kinase WM2015_2702 PF00162 Phosphoglycerate kinase WM2015_2703 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WM2015_2703 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WM2015_2704 PF00456 Transketolase, thiamine diphosphate binding domain WM2015_2704 PF02779 Transketolase, pyrimidine binding domain WM2015_2704 PF02780 Transketolase, C-terminal domain WM2015_2705 PF00593 TonB dependent receptor WM2015_2708 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2709 PF00072 Response regulator receiver domain WM2015_2709 PF00486 Transcriptional regulatory protein, C terminal WM2015_271 PF00365 Phosphofructokinase WM2015_2710 PF00437 Type II/IV secretion system protein WM2015_2711 PF00437 Type II/IV secretion system protein WM2015_2712 PF01168 Alanine racemase, N-terminal domain WM2015_2713 PF03807 NADP oxidoreductase coenzyme F420-dependent WM2015_2713 PF14748 Pyrroline-5-carboxylate reductase dimerisation WM2015_2714 PF02325 WM2015_2714 WM2015_2715 PF14467 Domain of unknown function (DUF4426) WM2015_2716 PF01883 Domain of unknown function DUF59 WM2015_2718 PF01433 Peptidase family M1 WM2015_2718 PF09127 Leukotriene A4 hydrolase, C-terminal WM2015_2719 PF00543 Nitrogen regulatory protein P-II WM2015_272 PF01773 Na+ dependent nucleoside transporter N-terminus WM2015_272 PF07662 Na+ dependent nucleoside transporter C-terminus WM2015_272 PF07670 Nucleoside recognition WM2015_2720 PF04380 WM2015_2720 WM2015_2721 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_2721 PF00563 EAL domain WM2015_2721 PF00990 GGDEF domain WM2015_2722 PF01078 Magnesium chelatase, subunit ChlI WM2015_2722 PF13335 WM2015_2722 WM2015_2722 PF13541 Subunit ChlI of Mg-chelatase WM2015_2723 PF01103 Surface antigen WM2015_2723 PF17243 WM2015_2723 WM2015_2724 PF04357 WM2015_2724 WM2015_2725 PF01040 UbiA prenyltransferase family WM2015_2726 PF05656 WM2015_2726 WM2015_2726 PF13560 Helix-turn-helix domain WM2015_2727 PF03061 Thioesterase superfamily WM2015_2728 PF14312 WM2015_2728 WM2015_2728 PF16640 WM2015_2728 WM2015_273 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_2731 PF03352 Methyladenine glycosylase WM2015_2735 PF00072 Response regulator receiver domain WM2015_2735 PF00990 GGDEF domain WM2015_2736 PF00072 Response regulator receiver domain WM2015_2736 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2736 PF07495 Y_Y_Y domain WM2015_2737 PF04337 Protein of unknown function, DUF480 WM2015_2739 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_274 PF13180 PDZ domain WM2015_2740 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_2741 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM2015_2742 PF00563 EAL domain WM2015_2745 PF01926 50S ribosome-binding GTPase WM2015_2745 PF11981 WM2015_2745 WM2015_2746 PF11067 WM2015_2746 WM2015_2747 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_2748 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO WM2015_2749 PF05545 WM2015_2749 WM2015_2750 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_2750 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WM2015_2752 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WM2015_2752 PF12801 WM2015_2752 WM2015_2752 PF13746 4Fe-4S dicluster domain WM2015_2753 PF05751 WM2015_2753 WM2015_2754 PF00122 E1-E2 ATPase WM2015_2754 PF00403 Heavy-metal-associated domain WM2015_2754 PF00702 haloacid dehalogenase-like hydrolase WM2015_2754 PF12156 WM2015_2754 WM2015_2755 PF03597 WM2015_2755 WM2015_2757 PF13386 WM2015_2757 WM2015_276 PF04542 Sigma-70 region 2 WM2015_276 PF08281 Sigma-70, region 4 WM2015_2760 PF02661 Fic/DOC family WM2015_2761 PF00326 Prolyl oligopeptidase family WM2015_2762 PF04055 Radical SAM superfamily WM2015_2762 PF06969 HemN C-terminal domain WM2015_2763 PF00027 Cyclic nucleotide-binding domain WM2015_2763 PF13545 Crp-like helix-turn-helix domain WM2015_2764 PF00246 Zinc carboxypeptidase WM2015_2765 PF01161 Phosphatidylethanolamine-binding protein WM2015_2766 PF00092 von Willebrand factor type A domain WM2015_2769 PF00120 Glutamine synthetase, catalytic domain WM2015_2769 PF03951 Glutamine synthetase, beta-Grasp domain WM2015_277 PF13302 Acetyltransferase (GNAT) domain WM2015_2770 PF13511 WM2015_2770 WM2015_2771 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2771 PF08448 PAS fold WM2015_2772 PF00072 Response regulator receiver domain WM2015_2772 PF00158 Sigma-54 interaction domain WM2015_2772 PF02954 Bacterial regulatory protein, Fis family WM2015_2773 PF02580 D-Tyr-tRNA(Tyr) deacylase WM2015_2774 PF13583 Metallo-peptidase family M12B Reprolysin-like WM2015_2775 PF07311 Dodecin WM2015_2776 PF01435 Peptidase family M48 WM2015_2777 PF04011 LemA family WM2015_2778 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2778 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2778 PF07494 Two component regulator propeller WM2015_2778 PF07495 Y_Y_Y domain WM2015_2779 PF13759 Putative 2OG-Fe(II) oxygenase WM2015_278 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_2780 PF01209 ubiE/COQ5 methyltransferase family WM2015_2781 PF00593 TonB dependent receptor WM2015_2781 PF07715 TonB-dependent Receptor Plug Domain WM2015_2782 PF00821 Phosphoenolpyruvate carboxykinase WM2015_2782 PF17297 WM2015_2782 WM2015_2783 PF03783 Curli production assembly/transport component CsgG WM2015_2785 PF00069 Protein kinase domain WM2015_2786 PF00498 FHA domain WM2015_2786 PF16697 WM2015_2786 WM2015_2787 PF07638 ECF sigma factor WM2015_2788 PF00069 Protein kinase domain WM2015_2788 PF13374 Tetratricopeptide repeat WM2015_2788 PF13424 Tetratricopeptide repeat WM2015_279 PF01641 SelR domain WM2015_2792 PF13229 Right handed beta helix region WM2015_2793 PF00158 Sigma-54 interaction domain WM2015_2793 PF02954 Bacterial regulatory protein, Fis family WM2015_2793 PF16697 WM2015_2793 WM2015_2794 PF00069 Protein kinase domain WM2015_2799 PF13188 PAS domain WM2015_28 PF00578 AhpC/TSA family WM2015_280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM2015_2800 PF00009 Elongation factor Tu GTP binding domain WM2015_2800 PF16658 WM2015_2800 WM2015_2802 PF00560 Leucine Rich Repeat WM2015_2802 PF13855 Leucine rich repeat WM2015_2804 PF01124 MAPEG family WM2015_2807 PF12840 Helix-turn-helix domain WM2015_2808 PF01551 Peptidase family M23 WM2015_2808 PF13511 WM2015_2808 WM2015_2809 PF03313 WM2015_2809 WM2015_2809 PF03315 Serine dehydratase beta chain WM2015_281 PF02152 Dihydroneopterin aldolase WM2015_2811 PF01266 FAD dependent oxidoreductase WM2015_2811 PF05199 GMC oxidoreductase WM2015_2812 PF13489 Methyltransferase domain WM2015_2813 PF13640 2OG-Fe(II) oxygenase superfamily WM2015_2814 PF05768 Glutaredoxin-like domain (DUF836) WM2015_2815 PF02645 Uncharacterised protein, DegV family COG1307 WM2015_2815 PF02734 DAK2 domain WM2015_2816 PF02660 WM2015_2816 WM2015_2817 PF02237 Biotin protein ligase C terminal domain WM2015_2817 PF03099 Biotin/lipoate A/B protein ligase family WM2015_2817 PF08279 HTH domain WM2015_2818 PF03309 Type III pantothenate kinase WM2015_2819 PF05036 Sporulation related domain WM2015_282 PF00814 Glycoprotease family WM2015_2820 PF01040 UbiA prenyltransferase family WM2015_2821 PF00156 Phosphoribosyl transferase domain WM2015_2822 PF04055 Radical SAM superfamily WM2015_2822 PF06968 Biotin and Thiamin Synthesis associated domain WM2015_2823 PF00155 Aminotransferase class I and II WM2015_2824 PF12146 Putative lysophospholipase WM2015_2825 PF08241 Methyltransferase domain WM2015_2826 PF13500 AAA domain WM2015_2827 PF00498 FHA domain WM2015_2827 PF00990 GGDEF domain WM2015_2828 PF00072 Response regulator receiver domain WM2015_2828 PF00512 His Kinase A (phospho-acceptor) domain WM2015_2828 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_2828 PF07494 Two component regulator propeller WM2015_2828 PF07495 Y_Y_Y domain WM2015_2828 PF12833 Helix-turn-helix domain WM2015_2829 PF11342 Protein of unknown function (DUF3144) WM2015_283 PF01165 Ribosomal protein S21 WM2015_2830 PF07152 YaeQ protein WM2015_2833 PF01483 Proprotein convertase P-domain WM2015_2833 PF13583 Metallo-peptidase family M12B Reprolysin-like WM2015_2834 PF00326 Prolyl oligopeptidase family WM2015_2834 PF07676 WD40-like Beta Propeller Repeat WM2015_2835 PF13590 Domain of unknown function (DUF4136) WM2015_2836 PF00990 GGDEF domain WM2015_2837 PF00106 short chain dehydrogenase WM2015_2838 PF12643 WM2015_2838 WM2015_2839 PF00875 DNA photolyase WM2015_2839 PF03441 FAD binding domain of DNA photolyase WM2015_284 PF09424 Yqey-like protein WM2015_2840 PF03713 Domain of unknown function (DUF305) WM2015_2841 PF01402 Ribbon-helix-helix protein, copG family WM2015_2842 PF01850 PIN domain WM2015_2846 PF09907 WM2015_2846 WM2015_2848 PF08378 WM2015_2848 WM2015_285 PF01807 CHC2 zinc finger WM2015_285 PF08275 DNA primase catalytic core, N-terminal domain WM2015_285 PF08278 DNA primase DnaG DnaB-binding WM2015_285 PF10410 DnaB-helicase binding domain of primase WM2015_285 PF13662 Toprim domain WM2015_2850 PF13391 WM2015_2850 WM2015_2851 PF09952 WM2015_2851 WM2015_2852 PF08843 Nucleotidyl transferase of unknown function (DUF1814) WM2015_2853 PF13391 WM2015_2853 WM2015_2854 PF02384 N-6 DNA Methylase WM2015_2854 PF12161 HsdM N-terminal domain WM2015_2855 PF13289 WM2015_2855 WM2015_2856 PF01935 Domain of unknown function DUF87 WM2015_2858 PF08719 Domain of unknown function (DUF1768) WM2015_2859 PF04326 Divergent AAA domain WM2015_2859 PF13749 ATP-dependent DNA helicase recG C-terminal WM2015_286 PF00140 Sigma-70 factor, region 1 WM2015_286 PF03979 Sigma-70 factor, region 1 WM2015_286 PF04539 Sigma-70 region 3 WM2015_286 PF04542 Sigma-70 region 2 WM2015_286 PF04545 Sigma-70, region 4 WM2015_286 PF04546 Sigma-70, non-essential region WM2015_2860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) WM2015_2860 PF04851 Type III restriction enzyme, res subunit WM2015_2863 PF00929 Exonuclease WM2015_2864 PF00929 Exonuclease WM2015_2865 PF11017 WM2015_2865 WM2015_2867 PF05016 Plasmid stabilisation system protein WM2015_2868 PF03693 Uncharacterised protein family (UPF0156) WM2015_2869 PF08241 Methyltransferase domain WM2015_2871 PF02517 CAAX protease self-immunity WM2015_2872 PF01163 RIO1 family WM2015_2876 PF12697 Alpha/beta hydrolase family WM2015_2876 PF13180 PDZ domain WM2015_2877 PF01891 Cobalt uptake substrate-specific transmembrane region WM2015_2878 PF04940 Sensors of blue-light using FAD WM2015_2881 PF03737 Demethylmenaquinone methyltransferase WM2015_2882 PF01957 NfeD-like C-terminal, partner-binding WM2015_2883 PF01145 SPFH domain / Band 7 family WM2015_2883 PF16200 WM2015_2883 WM2015_2884 PF06041 Bacterial protein of unknown function (DUF924) WM2015_2885 PF02146 Sir2 family WM2015_2887 PF02678 Pirin WM2015_2887 PF05726 Pirin C-terminal cupin domain WM2015_2888 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_2889 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_2891 PF03435 Saccharopine dehydrogenase WM2015_2892 PF01979 Amidohydrolase family WM2015_2895 PF00781 Diacylglycerol kinase catalytic domain WM2015_2896 PF11231 WM2015_2896 WM2015_2897 PF01152 Bacterial-like globin WM2015_2898 PF04461 Protein of unknown function (DUF520) WM2015_2899 PF01553 Acyltransferase WM2015_29 PF11412 Disulphide bond corrector protein DsbC WM2015_29 PF13899 Thioredoxin-like WM2015_2900 PF00962 Adenosine/AMP deaminase WM2015_2901 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_2902 PF01553 Acyltransferase WM2015_2902 PF07690 Major Facilitator Superfamily WM2015_2903 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_2903 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_2903 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_2903 PF12418 WM2015_2903 WM2015_2903 PF12806 WM2015_2903 WM2015_2904 PF04014 Antidote-toxin recognition MazE WM2015_2905 PF02661 Fic/DOC family WM2015_2909 PF01906 Putative heavy-metal-binding WM2015_291 PF01208 Uroporphyrinogen decarboxylase (URO-D) WM2015_2913 PF01565 FAD binding domain WM2015_2913 PF02913 FAD linked oxidases, C-terminal domain WM2015_2914 PF01979 Amidohydrolase family WM2015_2915 PF01699 Sodium/calcium exchanger protein WM2015_2916 PF00801 PKD domain WM2015_2916 PF10282 Lactonase, 7-bladed beta-propeller WM2015_2916 PF13205 Bacterial Ig-like domain WM2015_2917 PF07566 Domain of Unknown Function (DUF1543) WM2015_292 PF01761 3-dehydroquinate synthase WM2015_2920 PF02678 Pirin WM2015_2920 PF05726 Pirin C-terminal cupin domain WM2015_2921 PF02525 Flavodoxin-like fold WM2015_2922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_2922 PF03466 LysR substrate binding domain WM2015_2923 PF00578 AhpC/TSA family WM2015_2925 PF00270 DEAD/DEAH box helicase WM2015_2925 PF00271 Helicase conserved C-terminal domain WM2015_2926 PF08482 WM2015_2926 WM2015_293 PF01202 Shikimate kinase WM2015_2931 PF07394 WM2015_2931 WM2015_2932 PF08811 WM2015_2932 WM2015_2933 PF01839 FG-GAP repeat WM2015_2934 PF05661 WM2015_2934 WM2015_2935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_2937 PF02233 NAD(P) transhydrogenase beta subunit WM2015_2938 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM2015_2938 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM2015_2938 PF12769 Domain of unknown function (DUF3814) WM2015_2939 PF04264 YceI-like domain WM2015_294 PF09721 WM2015_294 WM2015_2940 PF01066 CDP-alcohol phosphatidyltransferase WM2015_2942 PF01242 6-pyruvoyl tetrahydropterin synthase WM2015_2943 PF00534 Glycosyl transferases group 1 WM2015_2944 PF13649 Methyltransferase domain WM2015_2946 PF01872 RibD C-terminal domain WM2015_2947 PF00925 GTP cyclohydrolase II WM2015_2948 PF02633 Creatinine amidohydrolase WM2015_2949 PF00593 TonB dependent receptor WM2015_2949 PF07715 TonB-dependent Receptor Plug Domain WM2015_295 PF13460 NADH(P)-binding WM2015_2950 PF03965 Penicillinase repressor WM2015_2951 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_2951 PF05569 BlaR1 peptidase M56 WM2015_2952 PF12276 WM2015_2952 WM2015_2953 PF07593 WM2015_2953 WM2015_2953 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_2954 PF13371 Tetratricopeptide repeat WM2015_2954 PF13432 Tetratricopeptide repeat WM2015_2957 PF01564 Spermine/spermidine synthase WM2015_2957 PF17284 WM2015_2957 WM2015_2958 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM2015_2959 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WM2015_2959 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WM2015_296 PF01243 Pyridoxamine 5'-phosphate oxidase WM2015_296 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WM2015_2960 PF05547 WM2015_2960 WM2015_2960 PF13365 Trypsin-like peptidase domain WM2015_2961 PF07715 TonB-dependent Receptor Plug Domain WM2015_2961 PF14905 Outer membrane protein beta-barrel family WM2015_2963 PF01235 WM2015_2963 WM2015_2964 PF07995 Glucose / Sorbosone dehydrogenase WM2015_2966 PF01734 Patatin-like phospholipase WM2015_2967 PF05036 Sporulation related domain WM2015_2968 PF00750 tRNA synthetases class I (R) WM2015_2968 PF03485 Arginyl tRNA synthetase N terminal domain WM2015_2968 PF05746 DALR anticodon binding domain WM2015_2969 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_297 PF00588 SpoU rRNA Methylase family WM2015_2970 PF00248 Aldo/keto reductase family WM2015_2971 PF16267 WM2015_2971 WM2015_2972 PF00082 Subtilase family WM2015_2972 PF14339 WM2015_2972 WM2015_2973 PF00082 Subtilase family WM2015_2973 PF02225 PA domain WM2015_2974 PF07593 WM2015_2974 WM2015_2974 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella WM2015_2976 PF01061 WM2015_2976 WM2015_2977 PF00005 ABC transporter WM2015_2978 PF00561 alpha/beta hydrolase fold WM2015_2978 PF08386 TAP-like protein WM2015_2979 PF00005 ABC transporter WM2015_2980 PF12679 WM2015_2980 WM2015_2981 PF06966 WM2015_2981 WM2015_2982 PF01380 SIS domain WM2015_2982 PF13522 Glutamine amidotransferase domain WM2015_2985 PF00892 EamA-like transporter family WM2015_2986 PF08212 Lipocalin-like domain WM2015_2988 PF01371 Trp repressor protein WM2015_2989 PF01634 ATP phosphoribosyltransferase WM2015_2989 PF08029 HisG, C-terminal domain WM2015_299 PF00270 DEAD/DEAH box helicase WM2015_299 PF00271 Helicase conserved C-terminal domain WM2015_299 PF00570 HRDC domain WM2015_299 PF09382 RQC domain WM2015_299 PF16124 WM2015_299 WM2015_2990 PF00815 Histidinol dehydrogenase WM2015_2991 PF00155 Aminotransferase class I and II WM2015_2992 PF00475 Imidazoleglycerol-phosphate dehydratase WM2015_2992 PF08645 Polynucleotide kinase 3 phosphatase WM2015_2993 PF00117 Glutamine amidotransferase class-I WM2015_2994 PF00977 Histidine biosynthesis protein WM2015_2995 PF00977 Histidine biosynthesis protein WM2015_2996 PF01502 Phosphoribosyl-AMP cyclohydrolase WM2015_2996 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WM2015_2997 PF00563 EAL domain WM2015_2998 PF02633 Creatinine amidohydrolase WM2015_2999 PF02698 DUF218 domain WM2015_3 PF02463 RecF/RecN/SMC N terminal domain WM2015_30 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WM2015_30 PF06827 Zinc finger found in FPG and IleRS WM2015_30 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WM2015_300 PF00762 Ferrochelatase WM2015_3000 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_3000 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_3001 PF13723 WM2015_3001 WM2015_3002 PF00535 Glycosyl transferase family 2 WM2015_3003 PF04820 Tryptophan halogenase WM2015_3005 PF01494 FAD binding domain WM2015_3006 PF00550 Phosphopantetheine attachment site WM2015_3008 PF00501 AMP-binding enzyme WM2015_3008 PF13193 AMP-binding enzyme C-terminal domain WM2015_3009 PF07977 FabA-like domain WM2015_3010 PF03279 WM2015_3010 WM2015_3014 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_3015 PF04235 WM2015_3015 WM2015_3016 PF05170 WM2015_3016 WM2015_3016 PF13502 WM2015_3016 WM2015_3019 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase WM2015_302 PF02416 mttA/Hcf106 family WM2015_3020 PF11948 WM2015_3020 WM2015_3022 PF04191 Phospholipid methyltransferase WM2015_3024 PF06172 Cupin superfamily (DUF985) WM2015_3025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_3028 PF06912 WM2015_3028 WM2015_3029 PF01177 Asp/Glu/Hydantoin racemase WM2015_303 PF02416 mttA/Hcf106 family WM2015_3030 PF01661 Macro domain WM2015_3031 PF12697 Alpha/beta hydrolase family WM2015_3033 PF00072 Response regulator receiver domain WM2015_3033 PF00196 Bacterial regulatory proteins, luxR family WM2015_3034 PF07730 Histidine kinase WM2015_3035 PF10067 WM2015_3035 WM2015_304 PF00902 Sec-independent protein translocase protein (TatC) WM2015_3040 PF00583 Acetyltransferase (GNAT) family WM2015_3045 PF01548 WM2015_3045 WM2015_3045 PF02371 WM2015_3045 WM2015_3046 PF01548 WM2015_3046 WM2015_3046 PF02371 WM2015_3046 WM2015_3048 PF01548 WM2015_3048 WM2015_3048 PF02371 WM2015_3048 WM2015_3049 PF00589 Phage integrase family WM2015_3049 PF13495 Phage integrase, N-terminal SAM-like domain WM2015_3050 PF00202 Aminotransferase class-III WM2015_3051 PF12802 MarR family WM2015_3052 PF00301 Rubredoxin WM2015_3053 PF00149 Calcineurin-like phosphoesterase WM2015_3054 PF02643 Uncharacterized ACR, COG1430 WM2015_3055 PF00580 UvrD/REP helicase N-terminal domain WM2015_3055 PF13361 UvrD-like helicase C-terminal domain WM2015_3057 PF00265 Thymidine kinase WM2015_3058 PF00990 GGDEF domain WM2015_3059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_3059 PF03466 LysR substrate binding domain WM2015_306 PF03641 Possible lysine decarboxylase WM2015_3060 PF00892 EamA-like transporter family WM2015_3062 PF13409 Glutathione S-transferase, N-terminal domain WM2015_3062 PF13410 Glutathione S-transferase, C-terminal domain WM2015_3063 PF00571 CBS domain WM2015_3064 PF01926 50S ribosome-binding GTPase WM2015_3064 PF10396 GTP-binding protein TrmE N-terminus WM2015_3064 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE WM2015_3065 PF02096 60Kd inner membrane protein WM2015_3065 PF14849 YidC periplasmic domain WM2015_3066 PF00825 Ribonuclease P WM2015_3067 PF00468 Ribosomal protein L34 WM2015_307 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_308 PF01694 Rhomboid family WM2015_309 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM2015_309 PF12833 Helix-turn-helix domain WM2015_31 PF00909 Ammonium Transporter Family WM2015_310 PF00144 Beta-lactamase WM2015_312 PF01131 DNA topoisomerase WM2015_312 PF01751 Toprim domain WM2015_312 PF13368 WM2015_312 WM2015_313 PF04361 WM2015_313 WM2015_314 PF02481 DNA recombination-mediator protein A WM2015_315 PF01476 LysM domain WM2015_316 PF01327 Polypeptide deformylase WM2015_317 PF00551 Formyl transferase WM2015_317 PF02911 Formyl transferase, C-terminal domain WM2015_318 PF01029 NusB family WM2015_318 PF01189 NOL1/NOP2/sun family WM2015_32 PF00543 Nitrogen regulatory protein P-II WM2015_320 PF00512 His Kinase A (phospho-acceptor) domain WM2015_320 PF00672 HAMP domain WM2015_320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_321 PF00072 Response regulator receiver domain WM2015_321 PF00158 Sigma-54 interaction domain WM2015_321 PF02954 Bacterial regulatory protein, Fis family WM2015_322 PF02080 TrkA-C domain WM2015_322 PF02254 TrkA-N domain WM2015_323 PF02386 Cation transport protein WM2015_324 PF01300 Telomere recombination WM2015_324 PF03481 Putative GTP-binding controlling metal-binding WM2015_326 PF03279 WM2015_326 WM2015_327 PF01170 Putative RNA methylase family UPF0020 WM2015_327 PF02926 THUMP domain WM2015_327 PF10672 S-adenosylmethionine-dependent methyltransferase WM2015_328 PF00732 GMC oxidoreductase WM2015_328 PF05199 GMC oxidoreductase WM2015_329 PF00082 Subtilase family WM2015_329 PF05547 WM2015_329 WM2015_33 PF00326 Prolyl oligopeptidase family WM2015_330 PF00005 ABC transporter WM2015_331 PF02687 WM2015_331 WM2015_331 PF12704 MacB-like periplasmic core domain WM2015_332 PF16576 WM2015_332 WM2015_333 PF00561 alpha/beta hydrolase fold WM2015_334 PF02080 TrkA-C domain WM2015_334 PF03600 Citrate transporter WM2015_335 PF01497 Periplasmic binding protein WM2015_336 PF02080 TrkA-C domain WM2015_336 PF03600 Citrate transporter WM2015_337 PF03190 Protein of unknown function, DUF255 WM2015_338 PF00990 GGDEF domain WM2015_338 PF13180 PDZ domain WM2015_338 PF13185 GAF domain WM2015_339 PF10672 S-adenosylmethionine-dependent methyltransferase WM2015_340 PF01790 WM2015_340 WM2015_341 PF00303 Thymidylate synthase WM2015_342 PF00186 Dihydrofolate reductase WM2015_343 PF00149 Calcineurin-like phosphoesterase WM2015_344 PF00582 Universal stress protein family WM2015_345 PF01488 Shikimate / quinate 5-dehydrogenase WM2015_345 PF08501 Shikimate dehydrogenase substrate binding domain WM2015_346 PF00490 Delta-aminolevulinic acid dehydratase WM2015_347 PF01266 FAD dependent oxidoreductase WM2015_347 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WM2015_348 PF03203 WM2015_348 WM2015_349 PF06127 WM2015_349 WM2015_350 PF01597 Glycine cleavage H-protein WM2015_351 PF04493 Endonuclease V WM2015_352 PF06127 WM2015_352 WM2015_353 PF03710 Glutamate-ammonia ligase adenylyltransferase WM2015_353 PF08335 GlnD PII-uridylyltransferase WM2015_354 PF00118 TCP-1/cpn60 chaperonin family WM2015_355 PF00166 Chaperonin 10 Kd subunit WM2015_356 PF03091 CutA1 divalent ion tolerance protein WM2015_357 PF02683 WM2015_357 WM2015_357 PF11412 Disulphide bond corrector protein DsbC WM2015_357 PF13899 Thioredoxin-like WM2015_358 PF00578 AhpC/TSA family WM2015_359 PF01220 Dehydroquinase class II WM2015_36 PF05872 WM2015_36 WM2015_360 PF00364 Biotin-requiring enzyme WM2015_361 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WM2015_361 PF02785 Biotin carboxylase C-terminal domain WM2015_361 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_362 PF01584 CheW-like domain WM2015_363 PF00072 Response regulator receiver domain WM2015_363 PF01584 CheW-like domain WM2015_363 PF01627 Hpt domain WM2015_363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_363 PF02895 Signal transducing histidine kinase, homodimeric domain WM2015_364 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM2015_364 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term WM2015_365 PF01584 CheW-like domain WM2015_366 PF00072 Response regulator receiver domain WM2015_367 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WM2015_367 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WM2015_368 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_369 PF02622 Uncharacterized ACR, COG1678 WM2015_37 PF00561 alpha/beta hydrolase fold WM2015_37 PF08386 TAP-like protein WM2015_370 PF03652 Uncharacterised protein family (UPF0081) WM2015_371 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM2015_371 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM2015_372 PF02390 Putative methyltransferase WM2015_373 PF02080 TrkA-C domain WM2015_373 PF03600 Citrate transporter WM2015_374 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_375 PF00355 Rieske [2Fe-2S] domain WM2015_377 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_379 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_38 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_380 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_381 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WM2015_382 PF04039 WM2015_382 WM2015_383 PF13244 WM2015_383 WM2015_384 PF03334 WM2015_384 WM2015_385 PF04066 WM2015_385 WM2015_386 PF01899 WM2015_386 WM2015_387 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_388 PF00438 S-adenosylmethionine synthetase, N-terminal domain WM2015_388 PF02772 S-adenosylmethionine synthetase, central domain WM2015_388 PF02773 S-adenosylmethionine synthetase, C-terminal domain WM2015_389 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WM2015_389 PF05221 S-adenosyl-L-homocysteine hydrolase WM2015_39 PF00313 'Cold-shock' DNA-binding domain WM2015_390 PF02219 Methylenetetrahydrofolate reductase WM2015_391 PF14255 WM2015_391 WM2015_392 PF01112 Asparaginase WM2015_393 PF01124 MAPEG family WM2015_394 PF00293 NUDIX domain WM2015_396 PF01367 5'-3' exonuclease, C-terminal SAM fold WM2015_396 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM2015_397 PF14279 WM2015_397 WM2015_398 PF00595 PDZ domain (Also known as DHR or GLGF) WM2015_398 PF13180 PDZ domain WM2015_398 PF13365 Trypsin-like peptidase domain WM2015_399 PF13520 Amino acid permease WM2015_4 PF00204 DNA gyrase B WM2015_4 PF00986 DNA gyrase B subunit, carboxyl terminus WM2015_4 PF01751 Toprim domain WM2015_4 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_40 PF00076 RNA recognition motif WM2015_400 PF03976 Polyphosphate kinase 2 (PPK2) WM2015_401 PF01345 WM2015_401 WM2015_402 PF06508 Queuosine biosynthesis protein QueC WM2015_403 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_404 PF00348 Polyprenyl synthetase WM2015_405 PF13525 Outer membrane lipoprotein WM2015_406 PF00849 RNA pseudouridylate synthase WM2015_406 PF01479 S4 domain WM2015_407 PF02578 Multi-copper polyphenol oxidoreductase laccase WM2015_408 PF01645 Conserved region in glutamate synthase WM2015_409 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) WM2015_409 PF13435 Cytochrome c554 and c-prime WM2015_41 PF00282 Pyridoxal-dependent decarboxylase conserved domain WM2015_410 PF00117 Glutamine amidotransferase class-I WM2015_410 PF06418 CTP synthase N-terminus WM2015_411 PF00793 DAHP synthetase I family WM2015_412 PF00113 Enolase, C-terminal TIM barrel domain WM2015_412 PF03952 Enolase, N-terminal domain WM2015_413 PF13432 Tetratricopeptide repeat WM2015_413 PF13489 Methyltransferase domain WM2015_415 PF13343 Bacterial extracellular solute-binding protein WM2015_416 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_417 PF01571 Aminomethyltransferase folate-binding domain WM2015_417 PF08669 Glycine cleavage T-protein C-terminal barrel domain WM2015_418 PF00710 Asparaginase WM2015_421 PF03358 NADPH-dependent FMN reductase WM2015_422 PF03960 ArsC family WM2015_423 PF03631 WM2015_423 WM2015_424 PF00578 AhpC/TSA family WM2015_425 PF00708 Acylphosphatase WM2015_428 PF01351 Ribonuclease HII WM2015_429 PF02684 WM2015_429 WM2015_43 PF02254 TrkA-N domain WM2015_43 PF07885 Ion channel WM2015_430 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WM2015_431 PF07977 FabA-like domain WM2015_432 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_432 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WM2015_433 PF03938 Outer membrane protein (OmpH-like) WM2015_434 PF01103 Surface antigen WM2015_434 PF07244 Surface antigen variable number repeat WM2015_435 PF00595 PDZ domain (Also known as DHR or GLGF) WM2015_435 PF02163 Peptidase family M50 WM2015_436 PF01148 Cytidylyltransferase family WM2015_437 PF01255 Putative undecaprenyl diphosphate synthase WM2015_438 PF01765 Ribosome recycling factor WM2015_439 PF00696 Amino acid kinase family WM2015_44 PF03707 WM2015_44 WM2015_440 PF00889 Elongation factor TS WM2015_441 PF00318 Ribosomal protein S2 WM2015_442 PF00581 Rhodanese-like domain WM2015_443 PF00924 Mechanosensitive ion channel WM2015_444 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_444 PF03129 Anticodon binding domain WM2015_444 PF04073 Aminoacyl-tRNA editing domain WM2015_445 PF13511 WM2015_445 WM2015_446 PF01066 CDP-alcohol phosphatidyltransferase WM2015_448 PF00583 Acetyltransferase (GNAT) family WM2015_449 PF00795 Carbon-nitrogen hydrolase WM2015_45 PF01168 Alanine racemase, N-terminal domain WM2015_45 PF14031 Putative serine dehydratase domain WM2015_450 PF16576 WM2015_450 WM2015_451 PF00873 AcrB/AcrD/AcrF family WM2015_452 PF00873 AcrB/AcrD/AcrF family WM2015_453 PF00999 Sodium/hydrogen exchanger family WM2015_454 PF00999 Sodium/hydrogen exchanger family WM2015_454 PF02254 TrkA-N domain WM2015_456 PF00246 Zinc carboxypeptidase WM2015_457 PF01292 Prokaryotic cytochrome b561 WM2015_458 PF01322 Cytochrome C' WM2015_459 PF01674 Lipase (class 2) WM2015_46 PF00486 Transcriptional regulatory protein, C terminal WM2015_46 PF13424 Tetratricopeptide repeat WM2015_460 PF00114 Pilin (bacterial filament) WM2015_461 PF13472 GDSL-like Lipase/Acylhydrolase family WM2015_462 PF00107 Zinc-binding dehydrogenase WM2015_462 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_463 PF00144 Beta-lactamase WM2015_465 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_465 PF08264 Anticodon-binding domain of tRNA WM2015_465 PF10458 Valyl tRNA synthetase tRNA binding arm WM2015_466 PF04364 DNA polymerase III chi subunit, HolC WM2015_467 PF00883 Cytosol aminopeptidase family, catalytic domain WM2015_467 PF02789 Cytosol aminopeptidase family, N-terminal domain WM2015_468 PF03739 WM2015_468 WM2015_469 PF03739 WM2015_469 WM2015_470 PF06271 WM2015_470 WM2015_471 PF11932 WM2015_471 WM2015_472 PF01618 WM2015_472 WM2015_473 PF01618 WM2015_473 WM2015_474 PF02472 Biopolymer transport protein ExbD/TolR WM2015_475 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_476 PF13181 Tetratricopeptide repeat WM2015_476 PF13432 Tetratricopeptide repeat WM2015_478 PF00589 Phage integrase family WM2015_478 PF02899 Phage integrase, N-terminal SAM-like domain WM2015_479 PF10411 Disulfide bond isomerase protein N-terminus WM2015_479 PF13098 Thioredoxin-like domain WM2015_48 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_48 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_480 PF02769 AIR synthase related protein, C-terminal domain WM2015_480 PF13507 CobB/CobQ-like glutamine amidotransferase domain WM2015_482 PF00437 Type II/IV secretion system protein WM2015_482 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_483 PF00482 Type II secretion system (T2SS), protein F WM2015_484 PF07963 Prokaryotic N-terminal methylation motif WM2015_484 PF08334 Type II secretion system (T2SS), protein G WM2015_485 PF07963 Prokaryotic N-terminal methylation motif WM2015_485 PF12019 Type II transport protein GspH WM2015_486 PF07963 Prokaryotic N-terminal methylation motif WM2015_487 PF07963 Prokaryotic N-terminal methylation motif WM2015_488 PF03934 Type II secretion system (T2SS), protein K WM2015_489 PF05137 WM2015_489 WM2015_49 PF04151 Bacterial pre-peptidase C-terminal domain WM2015_490 PF10741 WM2015_490 WM2015_492 PF00263 WM2015_492 WM2015_492 PF03958 Bacterial type II/III secretion system short domain WM2015_496 PF00639 PPIC-type PPIASE domain WM2015_497 PF01061 WM2015_497 WM2015_498 PF00005 ABC transporter WM2015_499 PF00535 Glycosyl transferase family 2 WM2015_500 PF13847 Methyltransferase domain WM2015_501 PF00535 Glycosyl transferase family 2 WM2015_504 PF00005 ABC transporter WM2015_504 PF12848 ABC transporter WM2015_505 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family WM2015_506 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family WM2015_507 PF09723 WM2015_507 WM2015_508 PF00152 tRNA synthetases class II (D, K and N) WM2015_508 PF01336 OB-fold nucleic acid binding domain WM2015_508 PF02938 GAD domain WM2015_509 PF12697 Alpha/beta hydrolase family WM2015_51 PF00036 EF hand WM2015_511 PF01709 Transcriptional regulator WM2015_512 PF02075 Crossover junction endodeoxyribonuclease RuvC WM2015_513 PF01330 RuvA N terminal domain WM2015_513 PF07499 RuvA, C-terminal domain WM2015_513 PF14520 Helix-hairpin-helix domain WM2015_514 PF05491 Holliday junction DNA helicase ruvB C-terminus WM2015_514 PF05496 Holliday junction DNA helicase ruvB N-terminus WM2015_515 PF03061 Thioesterase superfamily WM2015_516 PF01618 WM2015_516 WM2015_517 PF02472 Biopolymer transport protein ExbD/TolR WM2015_518 PF13103 TonB C terminal WM2015_519 PF04052 TolB amino-terminal domain WM2015_519 PF07676 WD40-like Beta Propeller Repeat WM2015_52 PF01061 WM2015_52 WM2015_520 PF00691 OmpA family WM2015_521 PF13525 Outer membrane lipoprotein WM2015_521 PF16331 WM2015_521 WM2015_522 PF04055 Radical SAM superfamily WM2015_522 PF13394 4Fe-4S single cluster domain WM2015_523 PF00483 Nucleotidyl transferase WM2015_524 PF00459 Inositol monophosphatase family WM2015_525 PF01507 Phosphoadenosine phosphosulfate reductase family WM2015_526 PF00009 Elongation factor Tu GTP binding domain WM2015_526 PF01583 Adenylylsulphate kinase WM2015_528 PF00675 Insulinase (Peptidase family M16) WM2015_528 PF05193 Peptidase M16 inactive domain WM2015_529 PF01625 Peptide methionine sulfoxide reductase WM2015_53 PF00005 ABC transporter WM2015_530 PF01641 SelR domain WM2015_531 PF00204 DNA gyrase B WM2015_531 PF00986 DNA gyrase B subunit, carboxyl terminus WM2015_531 PF01751 Toprim domain WM2015_531 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_532 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_532 PF13654 AAA domain WM2015_533 PF00582 Universal stress protein family WM2015_534 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WM2015_534 PF00696 Amino acid kinase family WM2015_534 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM2015_535 PF13672 Protein phosphatase 2C WM2015_536 PF16697 WM2015_536 WM2015_537 PF00069 Protein kinase domain WM2015_537 PF00672 HAMP domain WM2015_538 PF00027 Cyclic nucleotide-binding domain WM2015_538 PF00325 Bacterial regulatory proteins, crp family WM2015_539 PF02675 S-adenosylmethionine decarboxylase WM2015_54 PF13417 Glutathione S-transferase, N-terminal domain WM2015_541 PF00149 Calcineurin-like phosphoesterase WM2015_542 PF00005 ABC transporter WM2015_542 PF12848 ABC transporter WM2015_543 PF01863 Protein of unknown function DUF45 WM2015_544 PF00375 Sodium:dicarboxylate symporter family WM2015_545 PF00313 'Cold-shock' DNA-binding domain WM2015_547 PF04273 Putative phosphatase (DUF442) WM2015_548 PF03030 Inorganic H+ pyrophosphatase WM2015_549 PF01569 PAP2 superfamily WM2015_550 PF01242 6-pyruvoyl tetrahydropterin synthase WM2015_552 PF13649 Methyltransferase domain WM2015_553 PF13649 Methyltransferase domain WM2015_554 PF06325 Ribosomal protein L11 methyltransferase (PrmA) WM2015_555 PF04452 RNA methyltransferase WM2015_556 PF00202 Aminotransferase class-III WM2015_557 PF07963 Prokaryotic N-terminal methylation motif WM2015_557 PF08334 Type II secretion system (T2SS), protein G WM2015_558 PF07963 Prokaryotic N-terminal methylation motif WM2015_559 PF02501 Type II secretion system (T2SS), protein I WM2015_559 PF07963 Prokaryotic N-terminal methylation motif WM2015_560 PF07963 Prokaryotic N-terminal methylation motif WM2015_560 PF11612 Type II secretion system (T2SS), protein J WM2015_561 PF03934 Type II secretion system (T2SS), protein K WM2015_562 PF05134 Type II secretion system (T2SS), protein L WM2015_562 PF12693 GspL periplasmic domain WM2015_563 PF04612 Type II secretion system (T2SS), protein M WM2015_564 PF01203 WM2015_564 WM2015_565 PF00459 Inositol monophosphatase family WM2015_566 PF00293 NUDIX domain WM2015_567 PF13435 Cytochrome c554 and c-prime WM2015_567 PF13620 Carboxypeptidase regulatory-like domain WM2015_568 PF03653 WM2015_568 WM2015_569 PF01521 Iron-sulphur cluster biosynthesis WM2015_57 PF03724 META domain WM2015_57 PF09619 Type III secretion system lipoprotein chaperone (YscW) WM2015_571 PF00589 Phage integrase family WM2015_571 PF13495 Phage integrase, N-terminal SAM-like domain WM2015_572 PF07143 Hydroxyneurosporene synthase (CrtC) WM2015_572 PF17186 WM2015_572 WM2015_573 PF02687 WM2015_573 WM2015_574 PF00005 ABC transporter WM2015_575 PF11911 WM2015_575 WM2015_576 PF02261 Aspartate decarboxylase WM2015_577 PF00342 Phosphoglucose isomerase WM2015_579 PF05114 Protein of unknown function (DUF692) WM2015_58 PF08811 WM2015_58 WM2015_581 PF07681 WM2015_581 WM2015_582 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_582 PF08264 Anticodon-binding domain of tRNA WM2015_582 PF09334 tRNA synthetases class I (M) WM2015_582 PF13603 Leucyl-tRNA synthetase, Domain 2 WM2015_583 PF04390 Lipopolysaccharide-assembly WM2015_584 PF06144 DNA polymerase III, delta subunit WM2015_584 PF14840 Processivity clamp loader gamma complex DNA pol III C-term WM2015_585 PF01467 Cytidylyltransferase WM2015_586 PF02410 Oligomerisation domain WM2015_587 PF02590 Predicted SPOUT methyltransferase WM2015_588 PF02545 Maf-like protein WM2015_589 PF10150 Ribonuclease E/G family WM2015_59 PF07394 WM2015_59 WM2015_590 PF13116 WM2015_590 WM2015_590 PF13502 WM2015_590 WM2015_591 PF01523 Putative modulator of DNA gyrase WM2015_592 PF01523 Putative modulator of DNA gyrase WM2015_595 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_596 PF04264 YceI-like domain WM2015_597 PF00121 Triosephosphate isomerase WM2015_598 PF03840 Preprotein translocase SecG subunit WM2015_599 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WM2015_6 PF02092 WM2015_6 WM2015_6 PF05746 DALR anticodon binding domain WM2015_600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WM2015_601 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WM2015_602 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WM2015_603 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin WM2015_604 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM2015_604 PF10531 SLBB domain WM2015_604 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WM2015_606 PF00384 Molybdopterin oxidoreductase WM2015_606 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM2015_606 PF13510 2Fe-2S iron-sulfur cluster binding domain WM2015_607 PF00146 NADH dehydrogenase WM2015_608 PF12838 4Fe-4S dicluster domain WM2015_609 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WM2015_61 PF04542 Sigma-70 region 2 WM2015_61 PF08281 Sigma-70, region 4 WM2015_610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WM2015_611 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_611 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WM2015_612 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_613 PF13366 WM2015_613 WM2015_614 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WM2015_615 PF01509 TruB family pseudouridylate synthase (N terminal domain) WM2015_615 PF09157 Pseudouridine synthase II TruB, C-terminal WM2015_615 PF16198 WM2015_615 WM2015_616 PF00814 Glycoprotease family WM2015_619 PF13683 WM2015_619 WM2015_622 PF00270 DEAD/DEAH box helicase WM2015_622 PF06733 DEAD_2 WM2015_622 PF13307 Helicase C-terminal domain WM2015_623 PF14559 Tetratricopeptide repeat WM2015_624 PF00905 Penicillin binding protein transpeptidase domain WM2015_624 PF00912 Transglycosylase WM2015_624 PF14814 Bifunctional transglycosylase second domain WM2015_625 PF00534 Glycosyl transferases group 1 WM2015_625 PF00535 Glycosyl transferase family 2 WM2015_625 PF13692 Glycosyl transferases group 1 WM2015_626 PF00535 Glycosyl transferase family 2 WM2015_627 PF00535 Glycosyl transferase family 2 WM2015_628 PF02824 TGS domain WM2015_628 PF04607 Region found in RelA / SpoT proteins WM2015_628 PF13291 ACT domain WM2015_628 PF13328 HD domain WM2015_63 PF00092 von Willebrand factor type A domain WM2015_63 PF12034 WM2015_63 WM2015_63 PF12450 WM2015_63 WM2015_633 PF16640 WM2015_633 WM2015_634 PF00271 Helicase conserved C-terminal domain WM2015_634 PF04408 Helicase associated domain (HA2) WM2015_634 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WM2015_634 PF11898 WM2015_634 WM2015_635 PF01212 Beta-eliminating lyase WM2015_636 PF00005 ABC transporter WM2015_636 PF12399 Branched-chain amino acid ATP-binding cassette transporter WM2015_637 PF03968 OstA-like protein WM2015_638 PF06835 Lipopolysaccharide-assembly, LptC-related WM2015_640 PF00571 CBS domain WM2015_640 PF01380 SIS domain WM2015_641 PF01699 Sodium/calcium exchanger protein WM2015_642 PF01722 BolA-like protein WM2015_643 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM2015_644 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) WM2015_645 PF02321 Outer membrane efflux protein WM2015_646 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WM2015_647 PF03279 WM2015_647 WM2015_648 PF00535 Glycosyl transferase family 2 WM2015_648 PF04932 WM2015_648 WM2015_649 PF10276 Zinc-finger domain WM2015_650 PF01259 SAICAR synthetase WM2015_651 PF00834 Ribulose-phosphate 3 epimerase family WM2015_652 PF16640 WM2015_652 WM2015_653 PF00425 chorismate binding enzyme WM2015_653 PF04715 Anthranilate synthase component I, N terminal region WM2015_654 PF00117 Glutamine amidotransferase class-I WM2015_655 PF00591 Glycosyl transferase family, a/b domain WM2015_655 PF02885 Glycosyl transferase family, helical bundle domain WM2015_656 PF00218 Indole-3-glycerol phosphate synthase WM2015_657 PF00111 2Fe-2S iron-sulfur cluster binding domain WM2015_657 PF00175 Oxidoreductase NAD-binding domain WM2015_657 PF00970 Oxidoreductase FAD-binding domain WM2015_658 PF09413 Domain of unknown function (DUF2007) WM2015_659 PF01553 Acyltransferase WM2015_66 PF00593 TonB dependent receptor WM2015_66 PF07715 TonB-dependent Receptor Plug Domain WM2015_660 PF12697 Alpha/beta hydrolase family WM2015_661 PF13432 Tetratricopeptide repeat WM2015_661 PF14559 Tetratricopeptide repeat WM2015_662 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WM2015_663 PF00005 ABC transporter WM2015_664 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_665 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_666 PF03232 WM2015_666 WM2015_667 PF04338 Protein of unknown function, DUF481 WM2015_669 PF00572 Ribosomal protein L13 WM2015_67 PF03572 Peptidase family S41 WM2015_670 PF00380 Ribosomal protein S9/S16 WM2015_674 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_674 PF07730 Histidine kinase WM2015_675 PF00072 Response regulator receiver domain WM2015_675 PF00196 Bacterial regulatory proteins, luxR family WM2015_676 PF02225 PA domain WM2015_676 PF04389 Peptidase family M28 WM2015_678 PF01734 Patatin-like phospholipase WM2015_679 PF04116 WM2015_679 WM2015_68 PF04397 LytTr DNA-binding domain WM2015_680 PF00873 AcrB/AcrD/AcrF family WM2015_681 PF13437 HlyD family secretion protein WM2015_681 PF13533 Biotin-lipoyl like WM2015_682 PF00557 Metallopeptidase family M24 WM2015_683 PF01909 Nucleotidyltransferase domain WM2015_683 PF01966 HD domain WM2015_683 PF08335 GlnD PII-uridylyltransferase WM2015_684 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_684 PF14602 Hexapeptide repeat of succinyl-transferase WM2015_684 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WM2015_685 PF03960 ArsC family WM2015_686 PF01966 HD domain WM2015_686 PF13286 Phosphohydrolase-associated domain WM2015_688 PF07638 ECF sigma factor WM2015_689 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_691 PF13374 Tetratricopeptide repeat WM2015_691 PF13424 Tetratricopeptide repeat WM2015_691 PF13432 Tetratricopeptide repeat WM2015_691 PF13469 Sulfotransferase family WM2015_691 PF14559 Tetratricopeptide repeat WM2015_694 PF03160 Calx-beta domain WM2015_696 PF03486 HI0933-like protein WM2015_697 PF00293 NUDIX domain WM2015_698 PF04325 Protein of unknown function (DUF465) WM2015_699 PF00069 Protein kinase domain WM2015_699 PF13424 Tetratricopeptide repeat WM2015_7 PF02091 Glycyl-tRNA synthetase alpha subunit WM2015_702 PF02171 Piwi domain WM2015_706 PF00144 Beta-lactamase WM2015_708 PF01432 Peptidase family M3 WM2015_709 PF01391 Collagen triple helix repeat (20 copies) WM2015_71 PF01979 Amidohydrolase family WM2015_712 PF00300 Histidine phosphatase superfamily (branch 1) WM2015_713 PF02627 Carboxymuconolactone decarboxylase family WM2015_714 PF02635 DsrE/DsrF-like family WM2015_716 PF09423 PhoD-like phosphatase WM2015_717 PF00563 EAL domain WM2015_717 PF00990 GGDEF domain WM2015_717 PF01590 GAF domain WM2015_717 PF08448 PAS fold WM2015_719 PF00375 Sodium:dicarboxylate symporter family WM2015_721 PF02225 PA domain WM2015_723 PF00176 SNF2 family N-terminal domain WM2015_723 PF00271 Helicase conserved C-terminal domain WM2015_725 PF01565 FAD binding domain WM2015_726 PF02353 Mycolic acid cyclopropane synthetase WM2015_727 PF00149 Calcineurin-like phosphoesterase WM2015_727 PF16370 WM2015_727 WM2015_727 PF16371 WM2015_727 WM2015_728 PF03976 Polyphosphate kinase 2 (PPK2) WM2015_729 PF07638 ECF sigma factor WM2015_73 PF09493 WM2015_73 WM2015_730 PF00069 Protein kinase domain WM2015_730 PF13424 Tetratricopeptide repeat WM2015_733 PF03160 Calx-beta domain WM2015_735 PF00450 Serine carboxypeptidase WM2015_736 PF04542 Sigma-70 region 2 WM2015_736 PF08281 Sigma-70, region 4 WM2015_738 PF04575 WM2015_738 WM2015_739 PF00082 Subtilase family WM2015_74 PF00082 Subtilase family WM2015_741 PF02659 WM2015_741 WM2015_742 PF01988 WM2015_742 WM2015_743 PF07819 PGAP1-like protein WM2015_744 PF00483 Nucleotidyl transferase WM2015_745 PF00534 Glycosyl transferases group 1 WM2015_745 PF13579 Glycosyl transferase 4-like domain WM2015_746 PF00485 Phosphoribulokinase / Uridine kinase family WM2015_748 PF01124 MAPEG family WM2015_749 PF02667 WM2015_749 WM2015_75 PF01345 WM2015_75 WM2015_750 PF00144 Beta-lactamase WM2015_751 PF03193 Protein of unknown function, DUF258 WM2015_753 PF08808 WM2015_753 WM2015_755 PF00561 alpha/beta hydrolase fold WM2015_756 PF02417 WM2015_756 WM2015_757 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_757 PF14760 Rnk N-terminus WM2015_758 PF02082 Transcriptional regulator WM2015_759 PF13372 Alginate export WM2015_760 PF02239 Cytochrome D1 heme domain WM2015_760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_761 PF00593 TonB dependent receptor WM2015_761 PF07715 TonB-dependent Receptor Plug Domain WM2015_762 PF15780 WM2015_762 WM2015_763 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WM2015_764 PF07681 WM2015_764 WM2015_765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_765 PF03466 LysR substrate binding domain WM2015_768 PF00583 Acetyltransferase (GNAT) family WM2015_769 PF03992 Antibiotic biosynthesis monooxygenase WM2015_770 PF01810 WM2015_770 WM2015_774 PF00583 Acetyltransferase (GNAT) family WM2015_775 PF01850 PIN domain WM2015_777 PF11854 WM2015_777 WM2015_778 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) WM2015_779 PF00173 Cytochrome b5-like Heme/Steroid binding domain WM2015_780 PF00175 Oxidoreductase NAD-binding domain WM2015_780 PF01794 WM2015_780 WM2015_780 PF08022 WM2015_780 WM2015_781 PF01551 Peptidase family M23 WM2015_782 PF00043 Glutathione S-transferase, C-terminal domain WM2015_782 PF02798 Glutathione S-transferase, N-terminal domain WM2015_784 PF07638 ECF sigma factor WM2015_785 PF00069 Protein kinase domain WM2015_785 PF13424 Tetratricopeptide repeat WM2015_786 PF14312 WM2015_786 WM2015_788 PF05016 Plasmid stabilisation system protein WM2015_789 PF01845 CcdB protein WM2015_790 PF07362 Post-segregation antitoxin CcdA WM2015_793 PF02556 Preprotein translocase subunit SecB WM2015_794 PF01381 Helix-turn-helix WM2015_795 PF05973 WM2015_795 WM2015_797 PF15919 WM2015_797 WM2015_798 PF07927 YcfA-like protein WM2015_8 PF00117 Glutamine amidotransferase class-I WM2015_801 PF05063 WM2015_801 WM2015_802 PF09195 Restriction endonuclease BglII WM2015_805 PF13519 von Willebrand factor type A domain WM2015_807 PF13443 Cro/C1-type HTH DNA-binding domain WM2015_809 PF10095 WM2015_809 WM2015_81 PF00144 Beta-lactamase WM2015_810 PF13181 Tetratricopeptide repeat WM2015_811 PF00144 Beta-lactamase WM2015_812 PF01979 Amidohydrolase family WM2015_816 PF12680 SnoaL-like domain WM2015_817 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_818 PF04235 WM2015_818 WM2015_819 PF04235 WM2015_819 WM2015_82 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_82 PF06580 WM2015_82 WM2015_820 PF12893 Putative lumazine-binding WM2015_822 PF13855 Leucine rich repeat WM2015_823 PF00484 Carbonic anhydrase WM2015_824 PF00486 Transcriptional regulatory protein, C terminal WM2015_824 PF13424 Tetratricopeptide repeat WM2015_824 PF13432 Tetratricopeptide repeat WM2015_825 PF01345 WM2015_825 WM2015_825 PF17164 WM2015_825 WM2015_829 PF00526 WM2015_829 WM2015_829 PF11617 WM2015_829 WM2015_83 PF00072 Response regulator receiver domain WM2015_83 PF04397 LytTr DNA-binding domain WM2015_831 PF00486 Transcriptional regulatory protein, C terminal WM2015_831 PF13424 Tetratricopeptide repeat WM2015_831 PF14559 Tetratricopeptide repeat WM2015_832 PF12158 WM2015_832 WM2015_836 PF17164 WM2015_836 WM2015_839 PF00593 TonB dependent receptor WM2015_839 PF07715 TonB-dependent Receptor Plug Domain WM2015_84 PF02696 WM2015_84 WM2015_840 PF04973 WM2015_840 WM2015_841 PF01636 Phosphotransferase enzyme family WM2015_842 PF07638 ECF sigma factor WM2015_843 PF00069 Protein kinase domain WM2015_843 PF13374 Tetratricopeptide repeat WM2015_843 PF13424 Tetratricopeptide repeat WM2015_844 PF00873 AcrB/AcrD/AcrF family WM2015_845 PF16576 WM2015_845 WM2015_848 PF02028 BCCT family transporter WM2015_849 PF00850 Histone deacetylase domain WM2015_85 PF02469 Fasciclin domain WM2015_850 PF01923 Cobalamin adenosyltransferase WM2015_852 PF03572 Peptidase family S41 WM2015_852 PF14684 Tricorn protease C1 domain WM2015_853 PF00557 Metallopeptidase family M24 WM2015_858 PF14534 Domain of unknown function (DUF4440) WM2015_859 PF00141 Peroxidase WM2015_86 PF00082 Subtilase family WM2015_86 PF00801 PKD domain WM2015_86 PF02225 PA domain WM2015_860 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) WM2015_861 PF00501 AMP-binding enzyme WM2015_861 PF13193 AMP-binding enzyme C-terminal domain WM2015_861 PF16177 WM2015_861 WM2015_862 PF01391 Collagen triple helix repeat (20 copies) WM2015_864 PF13704 WM2015_864 WM2015_865 PF00005 ABC transporter WM2015_866 PF00873 AcrB/AcrD/AcrF family WM2015_867 PF16576 WM2015_867 WM2015_868 PF14117 WM2015_868 WM2015_869 PF13460 NADH(P)-binding WM2015_869 PF13781 WM2015_869 WM2015_87 PF03441 FAD binding domain of DNA photolyase WM2015_870 PF10027 WM2015_870 WM2015_873 PF04235 WM2015_873 WM2015_874 PF11185 WM2015_874 WM2015_876 PF01548 WM2015_876 WM2015_876 PF02371 WM2015_876 WM2015_877 PF03235 WM2015_877 WM2015_88 PF04134 WM2015_88 WM2015_884 PF13520 Amino acid permease WM2015_886 PF04828 Glutathione-dependent formaldehyde-activating enzyme WM2015_887 PF13602 Zinc-binding dehydrogenase WM2015_889 PF10503 Esterase PHB depolymerase WM2015_89 PF05048 Periplasmic copper-binding protein (NosD) WM2015_89 PF13229 Right handed beta helix region WM2015_891 PF00175 Oxidoreductase NAD-binding domain WM2015_891 PF00970 Oxidoreductase FAD-binding domain WM2015_893 PF04828 Glutathione-dependent formaldehyde-activating enzyme WM2015_894 PF12823 WM2015_894 WM2015_895 PF01244 Membrane dipeptidase (Peptidase family M19) WM2015_896 PF12006 WM2015_896 WM2015_897 PF09694 WM2015_897 WM2015_898 PF09694 WM2015_898 WM2015_899 PF14312 WM2015_899 WM2015_90 PF00474 Sodium:solute symporter family WM2015_900 PF00149 Calcineurin-like phosphoesterase WM2015_901 PF00171 Aldehyde dehydrogenase family WM2015_902 PF00939 Sodium:sulfate symporter transmembrane region WM2015_903 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_903 PF02861 Clp amino terminal domain WM2015_903 PF07724 AAA domain (Cdc48 subfamily) WM2015_903 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_908 PF04402 Protein of unknown function (DUF541) WM2015_909 PF05742 WM2015_909 WM2015_91 PF01063 Aminotransferase class IV WM2015_910 PF02562 PhoH-like protein WM2015_910 PF13638 PIN domain WM2015_911 PF00578 AhpC/TSA family WM2015_912 PF00701 Dihydrodipicolinate synthetase family WM2015_913 PF06804 NlpB/DapX lipoprotein WM2015_914 PF00037 4Fe-4S binding domain WM2015_914 PF11953 Domain of unknown function (DUF3470) WM2015_915 PF01743 Poly A polymerase head domain WM2015_915 PF12626 Polymerase A arginine-rich C-terminus WM2015_915 PF12627 Probable RNA and SrmB- binding site of polymerase A WM2015_916 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM2015_917 PF02548 Ketopantoate hydroxymethyltransferase WM2015_918 PF02569 Pantoate-beta-alanine ligase WM2015_919 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WM2015_921 PF09500 Putative thioesterase (yiiD_Cterm) WM2015_922 PF07690 Major Facilitator Superfamily WM2015_923 PF00593 TonB dependent receptor WM2015_923 PF07715 TonB-dependent Receptor Plug Domain WM2015_924 PF00593 TonB dependent receptor WM2015_925 PF02080 TrkA-C domain WM2015_925 PF03600 Citrate transporter WM2015_926 PF01433 Peptidase family M1 WM2015_928 PF04751 Protein of unknown function (DUF615) WM2015_93 PF03572 Peptidase family S41 WM2015_93 PF07676 WD40-like Beta Propeller Repeat WM2015_93 PF14684 Tricorn protease C1 domain WM2015_93 PF14685 Tricorn protease PDZ domain WM2015_930 PF00905 Penicillin binding protein transpeptidase domain WM2015_931 PF00069 Protein kinase domain WM2015_932 PF16576 WM2015_932 WM2015_933 PF00873 AcrB/AcrD/AcrF family WM2015_934 PF11381 WM2015_934 WM2015_935 PF04228 WM2015_935 WM2015_936 PF11172 WM2015_936 WM2015_938 PF05982 WM2015_938 WM2015_939 PF00005 ABC transporter WM2015_94 PF09835 WM2015_94 WM2015_940 PF01061 WM2015_940 WM2015_941 PF01979 Amidohydrolase family WM2015_942 PF07730 Histidine kinase WM2015_943 PF00072 Response regulator receiver domain WM2015_943 PF00196 Bacterial regulatory proteins, luxR family WM2015_944 PF06736 WM2015_944 WM2015_945 PF06736 WM2015_945 WM2015_946 PF00696 Amino acid kinase family WM2015_946 PF01472 PUA domain WM2015_947 PF00990 GGDEF domain WM2015_947 PF02743 Cache domain WM2015_948 PF04909 Amidohydrolase WM2015_949 PF00144 Beta-lactamase WM2015_95 PF02687 WM2015_95 WM2015_95 PF12704 MacB-like periplasmic core domain WM2015_950 PF03280 Proteobacterial lipase chaperone protein WM2015_951 PF00561 alpha/beta hydrolase fold WM2015_952 PF07638 ECF sigma factor WM2015_953 PF00069 Protein kinase domain WM2015_954 PF01364 Peptidase family C25 WM2015_954 PF01483 Proprotein convertase P-domain WM2015_954 PF05345 Putative Ig domain WM2015_955 PF02265 S1/P1 Nuclease WM2015_956 PF00999 Sodium/hydrogen exchanger family WM2015_957 PF03168 Late embryogenesis abundant protein WM2015_958 PF12697 Alpha/beta hydrolase family WM2015_96 PF00005 ABC transporter WM2015_960 PF00171 Aldehyde dehydrogenase family WM2015_961 PF01219 Prokaryotic diacylglycerol kinase WM2015_962 PF01432 Peptidase family M3 WM2015_963 PF00155 Aminotransferase class I and II WM2015_964 PF00462 Glutaredoxin WM2015_965 PF03372 Endonuclease/Exonuclease/phosphatase family WM2015_966 PF00583 Acetyltransferase (GNAT) family WM2015_966 PF13380 CoA binding domain WM2015_966 PF13549 ATP-grasp domain WM2015_966 PF13607 Succinyl-CoA ligase like flavodoxin domain WM2015_967 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_967 PF01464 Transglycosylase SLT domain WM2015_968 PF02673 WM2015_968 WM2015_969 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM2015_969 PF01676 Metalloenzyme superfamily WM2015_97 PF16576 WM2015_97 WM2015_970 PF00591 Glycosyl transferase family, a/b domain WM2015_970 PF02885 Glycosyl transferase family, helical bundle domain WM2015_970 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WM2015_971 PF01791 DeoC/LacD family aldolase WM2015_972 PF13561 Enoyl-(Acyl carrier protein) reductase WM2015_973 PF00563 EAL domain WM2015_973 PF00990 GGDEF domain WM2015_973 PF03924 CHASE domain WM2015_973 PF13426 PAS domain WM2015_975 PF01734 Patatin-like phospholipase WM2015_978 PF13673 Acetyltransferase (GNAT) domain WM2015_979 PF06803 WM2015_979 WM2015_980 PF01124 MAPEG family WM2015_982 PF01522 Polysaccharide deacetylase WM2015_984 PF00106 short chain dehydrogenase WM2015_986 PF04247 WM2015_986 WM2015_987 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WM2015_989 PF07947 WM2015_989 WM2015_99 PF04542 Sigma-70 region 2 WM2015_99 PF08281 Sigma-70, region 4 WM2015_991 PF04055 Radical SAM superfamily WM2015_994 PF02534 Type IV secretory system Conjugative DNA transfer WM2015_997 PF14110 WM2015_997