locus-tag class description MIS33_00005 PF00308 Bacterial dnaA protein MIS33_00005 PF08299 Bacterial dnaA protein helix-turn-helix MIS33_00005 PF11638 DnaA N-terminal domain MIS33_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MIS33_00010 PF02767 DNA polymerase III beta subunit, central domain MIS33_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MIS33_00030 PF02401 LytB protein MIS33_00040 PF01252 Signal peptidase (SPase) II MIS33_00045 PF01197 Ribosomal protein L31 MIS33_00055 PF01743 Poly A polymerase head domain MIS33_00055 PF12626 Polymerase A arginine-rich C-terminus MIS33_00055 PF12627 Probable RNA and SrmB- binding site of polymerase A MIS33_00065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_00070 PF02666 Phosphatidylserine decarboxylase MIS33_00080 PF01925 Sulfite exporter TauE/SafE MIS33_00085 PF05159 Capsule polysaccharide biosynthesis protein MIS33_00090 PF05159 Capsule polysaccharide biosynthesis protein MIS33_00115 PF00857 Isochorismatase family MIS33_00120 PF00892 EamA-like transporter family MIS33_00155 PF01134 Glucose inhibited division protein A MIS33_00155 PF13932 GidA associated domain MIS33_00175 PF01226 Formate/nitrite transporter MIS33_00185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIS33_00185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIS33_00190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_00205 PF01196 Ribosomal protein L17 MIS33_00210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MIS33_00210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MIS33_00210 PF01000 RNA polymerase Rpb3/RpoA insert domain MIS33_00215 PF00163 Ribosomal protein S4/S9 N-terminal domain MIS33_00215 PF01479 S4 domain MIS33_00220 PF00411 Ribosomal protein S11 MIS33_00225 PF00416 Ribosomal protein S13/S18 MIS33_00230 PF00444 Ribosomal protein L36 MIS33_00235 PF01176 Translation initiation factor 1A / IF-1 MIS33_00240 PF00344 SecY translocase MIS33_00245 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MIS33_00250 PF00327 Ribosomal protein L30p/L7e MIS33_00255 PF00333 Ribosomal protein S5, N-terminal domain MIS33_00255 PF03719 Ribosomal protein S5, C-terminal domain MIS33_00260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MIS33_00265 PF00347 Ribosomal protein L6 MIS33_00270 PF00410 Ribosomal protein S8 MIS33_00275 PF00253 Ribosomal protein S14p/S29e MIS33_00280 PF00281 Ribosomal protein L5 MIS33_00280 PF00673 ribosomal L5P family C-terminus MIS33_00285 PF00467 KOW motif MIS33_00285 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MIS33_00290 PF00238 Ribosomal protein L14p/L23e MIS33_00305 PF00842 Alanine racemase, C-terminal domain MIS33_00305 PF01168 Alanine racemase, N-terminal domain MIS33_00310 PF07687 Peptidase dimerisation domain MIS33_00310 PF01546 Peptidase family M20/M25/M40 MIS33_00320 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MIS33_00320 PF01243 Pyridoxamine 5'-phosphate oxidase MIS33_00325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MIS33_00325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MIS33_00325 PF01488 Shikimate / quinate 5-dehydrogenase MIS33_00330 PF00366 Ribosomal protein S17 MIS33_00335 PF00831 Ribosomal L29 protein MIS33_00340 PF00252 Ribosomal protein L16p/L10e MIS33_00345 PF07650 KH domain MIS33_00345 PF00189 Ribosomal protein S3, C-terminal domain MIS33_00350 PF00237 Ribosomal protein L22p/L17e MIS33_00355 PF00203 Ribosomal protein S19 MIS33_00360 PF00181 Ribosomal Proteins L2, RNA binding domain MIS33_00360 PF03947 Ribosomal Proteins L2, C-terminal domain MIS33_00365 PF00276 Ribosomal protein L23 MIS33_00370 PF00573 Ribosomal protein L4/L1 family MIS33_00375 PF00297 Ribosomal protein L3 MIS33_00385 PF01494 FAD binding domain MIS33_00395 PF01810 LysE type translocator MIS33_00410 PF03884 DNA gyrase inhibitor YacG MIS33_00415 PF01351 Ribonuclease HII MIS33_00425 PF08459 UvrC Helix-hairpin-helix N-terminal MIS33_00425 PF01541 GIY-YIG catalytic domain MIS33_00425 PF02151 UvrB/uvrC motif MIS33_00430 PF01351 Ribonuclease HII MIS33_00435 PF03884 DNA gyrase inhibitor YacG MIS33_00440 PF00939 Sodium:sulfate symporter transmembrane region MIS33_00445 PF02684 Lipid-A-disaccharide synthetase MIS33_00450 PF04997 RNA polymerase Rpb1, domain 1 MIS33_00450 PF00623 RNA polymerase Rpb1, domain 2 MIS33_00450 PF04983 RNA polymerase Rpb1, domain 3 MIS33_00450 PF05000 RNA polymerase Rpb1, domain 4 MIS33_00450 PF04998 RNA polymerase Rpb1, domain 5 MIS33_00460 PF04560 RNA polymerase Rpb2, domain 7 MIS33_00460 PF00562 RNA polymerase Rpb2, domain 6 MIS33_00460 PF10385 RNA polymerase beta subunit external 1 domain MIS33_00460 PF04561 RNA polymerase Rpb2, domain 2 MIS33_00460 PF04563 RNA polymerase beta subunit MIS33_00460 PF04565 RNA polymerase Rpb2, domain 3 MIS33_00465 PF00542 Ribosomal protein L7/L12 C-terminal domain MIS33_00465 PF16320 Ribosomal protein L7/L12 dimerisation domain MIS33_00470 PF00466 Ribosomal protein L10 MIS33_00475 PF00687 Ribosomal protein L1p/L10e family MIS33_00480 PF00298 Ribosomal protein L11, RNA binding domain MIS33_00480 PF03946 Ribosomal protein L11, N-terminal domain MIS33_00485 PF00467 KOW motif MIS33_00485 PF02357 Transcription termination factor nusG MIS33_00500 PF03143 Elongation factor Tu C-terminal domain MIS33_00500 PF03144 Elongation factor Tu domain 2 MIS33_00500 PF00009 Elongation factor Tu GTP binding domain MIS33_00520 PF00037 4Fe-4S binding domain MIS33_00525 PF01170 Putative RNA methylase family UPF0020 MIS33_00525 PF02926 THUMP domain MIS33_00525 PF10672 S-adenosylmethionine-dependent methyltransferase MIS33_00530 PF00773 RNB domain MIS33_00535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MIS33_00535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MIS33_00565 PF00478 IMP dehydrogenase / GMP reductase domain MIS33_00565 PF00571 CBS domain MIS33_00575 PF00654 Voltage gated chloride channel MIS33_00580 PF01814 Hemerythrin HHE cation binding domain MIS33_00585 PF00521 DNA gyrase/topoisomerase IV, subunit A MIS33_00585 PF03989 DNA gyrase C-terminal domain, beta-propeller MIS33_00590 PF00884 Sulfatase MIS33_00595 PF00171 Aldehyde dehydrogenase family MIS33_00600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS33_00625 PF00202 Aminotransferase class-III MIS33_00650 PF01624 MutS domain I MIS33_00650 PF05188 MutS domain II MIS33_00650 PF05192 MutS domain III MIS33_00650 PF05190 MutS family domain IV MIS33_00650 PF00488 MutS domain V MIS33_00655 PF18075 FtsX extracellular domain MIS33_00660 PF00005 ABC transporter MIS33_00665 PF02978 Signal peptide binding domain MIS33_00665 PF02881 SRP54-type protein, helical bundle domain MIS33_00665 PF00448 SRP54-type protein, GTPase domain MIS33_00670 PF06123 Inner membrane protein CreD MIS33_00675 PF00072 Response regulator receiver domain MIS33_00675 PF00486 Transcriptional regulatory protein, C terminal MIS33_00680 PF00672 HAMP domain MIS33_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_00680 PF00512 His Kinase A (phospho-acceptor) domain MIS33_00685 PF02481 DNA recombination-mediator protein A MIS33_00685 PF17782 DprA winged helix domain MIS33_00690 PF00889 Elongation factor TS MIS33_00695 PF00318 Ribosomal protein S2 MIS33_00700 PF00162 Phosphoglycerate kinase MIS33_00705 PF18073 Rubredoxin metal binding domain MIS33_00715 PF01548 Transposase MIS33_00715 PF02371 Transposase IS116/IS110/IS902 family MIS33_00755 PF01300 Telomere recombination MIS33_00770 PF13018 Extended Signal Peptide of Type V secretion system MIS33_00770 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin MIS33_00770 PF03895 YadA-like membrane anchor domain MIS33_00770 PF05662 Coiled stalk of trimeric autotransporter adhesin MIS33_00775 PF12631 MnmE helical domain MIS33_00775 PF10396 GTP-binding protein TrmE N-terminus MIS33_00775 PF01926 50S ribosome-binding GTPase MIS33_00790 PF01980 tRNA-methyltransferase O MIS33_00790 PF18389 TrmO C-terminal domain MIS33_00810 PF00472 RF-1 domain MIS33_00815 PF00348 Polyprenyl synthetase MIS33_00820 PF02609 Exonuclease VII small subunit MIS33_00825 PF00829 Ribosomal prokaryotic L21 protein MIS33_00830 PF01016 Ribosomal L27 protein MIS33_00840 PF00348 Polyprenyl synthetase MIS33_00845 PF04284 Protein of unknown function (DUF441) MIS33_00865 PF00356 Bacterial regulatory proteins, lacI family MIS33_00870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MIS33_00870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MIS33_00875 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MIS33_00880 PF07690 Major Facilitator Superfamily MIS33_00885 PF01906 Putative heavy-metal-binding MIS33_00890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MIS33_00890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MIS33_00895 PF01012 Electron transfer flavoprotein domain MIS33_00900 PF00766 Electron transfer flavoprotein FAD-binding domain MIS33_00900 PF01012 Electron transfer flavoprotein domain MIS33_00905 PF07977 FabA-like domain MIS33_00910 PF00132 Bacterial transferase hexapeptide (six repeats) MIS33_00910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MIS33_00930 PF00999 Sodium/hydrogen exchanger family MIS33_00930 PF02080 TrkA-C domain MIS33_00930 PF03471 Transporter associated domain MIS33_00935 PF02562 PhoH-like protein MIS33_00940 PF01235 Sodium:alanine symporter family MIS33_00965 PF00133 tRNA synthetases class I (I, L, M and V) MIS33_00965 PF06827 Zinc finger found in FPG and IleRS MIS33_00965 PF08264 Anticodon-binding domain of tRNA MIS33_00970 PF18254 HMW1 domain 2 MIS33_00970 PF18071 HMW1C N-terminal MIS33_00985 PF01612 3'-5' exonuclease MIS33_00985 PF01367 5'-3' exonuclease, C-terminal SAM fold MIS33_00985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MIS33_00985 PF00476 DNA polymerase family A MIS33_00990 PF02075 Crossover junction endodeoxyribonuclease RuvC MIS33_00995 PF00005 ABC transporter MIS33_00995 PF00664 ABC transporter transmembrane region MIS33_01010 PF02321 Outer membrane efflux protein MIS33_01015 PF02600 Disulfide bond formation protein DsbB MIS33_01020 PF01925 Sulfite exporter TauE/SafE MIS33_01030 PF12450 von Willebrand factor MIS33_01030 PF00092 von Willebrand factor type A domain MIS33_01030 PF12034 Domain of unknown function (DUF3520) MIS33_01035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MIS33_01035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MIS33_01035 PF13288 DXP reductoisomerase C-terminal domain MIS33_01040 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MIS33_01060 PF07963 Prokaryotic N-terminal methylation motif MIS33_01060 PF00114 Pilin (bacterial filament) MIS33_01065 PF00114 Pilin (bacterial filament) MIS33_01065 PF07963 Prokaryotic N-terminal methylation motif MIS33_01070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MIS33_01070 PF02844 Phosphoribosylglycinamide synthetase, N domain MIS33_01070 PF02843 Phosphoribosylglycinamide synthetase, C domain MIS33_01080 PF00696 Amino acid kinase family MIS33_01085 PF01220 Dehydroquinase class II MIS33_01095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MIS33_01095 PF00056 lactate/malate dehydrogenase, NAD binding domain MIS33_01100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS33_01100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_01110 PF12804 MobA-like NTP transferase domain MIS33_01110 PF00132 Bacterial transferase hexapeptide (six repeats) MIS33_01120 PF01594 AI-2E family transporter MIS33_01165 PF00533 BRCA1 C Terminus (BRCT) domain MIS33_01165 PF01653 NAD-dependent DNA ligase adenylation domain MIS33_01165 PF03120 NAD-dependent DNA ligase OB-fold domain MIS33_01165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MIS33_01165 PF12826 Helix-hairpin-helix motif MIS33_01185 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MIS33_01190 PF02163 Peptidase family M50 MIS33_01190 PF17820 PDZ domain MIS33_01195 PF07244 Surface antigen variable number repeat MIS33_01195 PF01103 Surface antigen MIS33_01205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MIS33_01205 PF00132 Bacterial transferase hexapeptide (six repeats) MIS33_01215 PF07681 DoxX MIS33_01220 PF01435 Peptidase family M48 MIS33_01220 PF07720 Tetratricopeptide repeat MIS33_01225 PF01906 Putative heavy-metal-binding MIS33_01230 PF01906 Putative heavy-metal-binding MIS33_01240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS33_01240 PF07497 Rho termination factor, RNA-binding domain MIS33_01240 PF07498 Rho termination factor, N-terminal domain MIS33_01245 PF00793 DAHP synthetase I family MIS33_01260 PF01330 RuvA N terminal domain MIS33_01260 PF07499 RuvA, C-terminal domain MIS33_01265 PF01510 N-acetylmuramoyl-L-alanine amidase MIS33_01275 PF00342 Phosphoglucose isomerase MIS33_01280 PF02685 Glucokinase MIS33_01280 PF01418 Helix-turn-helix domain, rpiR family MIS33_01280 PF01380 SIS domain MIS33_01285 PF00293 NUDIX domain MIS33_01290 PF02685 Glucokinase MIS33_01295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MIS33_01300 PF01810 LysE type translocator MIS33_01310 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MIS33_01310 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MIS33_01315 PF00920 Dehydratase family MIS33_01320 PF00300 Histidine phosphatase superfamily (branch 1) MIS33_01325 PF00535 Glycosyl transferase family 2 MIS33_01335 PF01928 CYTH domain MIS33_01340 PF00830 Ribosomal L28 family MIS33_01345 PF00471 Ribosomal protein L33 MIS33_01350 PF05675 Protein of unknown function (DUF817) MIS33_01355 PF01081 KDPG and KHG aldolase MIS33_01365 PF07715 TonB-dependent Receptor Plug Domain MIS33_01365 PF00593 TonB dependent receptor MIS33_01370 PF00009 Elongation factor Tu GTP binding domain MIS33_01370 PF03144 Elongation factor Tu domain 2 MIS33_01370 PF03143 Elongation factor Tu C-terminal domain MIS33_01375 PF00338 Ribosomal protein S10p/S20e MIS33_01380 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MIS33_01385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MIS33_01400 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MIS33_01405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MIS33_01425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MIS33_01425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MIS33_01425 PF10531 SLBB domain MIS33_01435 PF04480 Protein of unknown function (DUF559) MIS33_01440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MIS33_01440 PF00384 Molybdopterin oxidoreductase MIS33_01440 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MIS33_01445 PF00146 NADH dehydrogenase MIS33_01450 PF12838 4Fe-4S dicluster domain MIS33_01455 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MIS33_01460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MIS33_01475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MIS33_01475 PF00361 Proton-conducting membrane transporter MIS33_01480 PF00857 Isochorismatase family MIS33_01485 PF00361 Proton-conducting membrane transporter MIS33_01485 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus MIS33_01490 PF00361 Proton-conducting membrane transporter MIS33_01495 PF00465 Iron-containing alcohol dehydrogenase MIS33_01500 PF01116 Fructose-bisphosphate aldolase class-II MIS33_01510 PF00271 Helicase conserved C-terminal domain MIS33_01510 PF16124 RecQ zinc-binding MIS33_01510 PF09382 RQC domain MIS33_01510 PF00270 DEAD/DEAH box helicase MIS33_01510 PF00570 HRDC domain MIS33_01515 PF00152 tRNA synthetases class II (D, K and N) MIS33_01515 PF01336 OB-fold nucleic acid binding domain MIS33_01520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIS33_01520 PF08447 PAS fold MIS33_01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIS33_01530 PF08447 PAS fold MIS33_01545 PF00696 Amino acid kinase family MIS33_01550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIS33_01550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIS33_01560 PF13520 Amino acid permease MIS33_01565 PF01380 SIS domain MIS33_01570 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MIS33_01585 PF02542 YgbB family MIS33_01610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MIS33_01620 PF01025 GrpE MIS33_01630 PF00860 Permease family MIS33_01635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIS33_01640 PF00149 Calcineurin-like phosphoesterase MIS33_01650 PF01556 DnaJ C terminal domain MIS33_01650 PF00226 DnaJ domain MIS33_01650 PF00684 DnaJ central domain MIS33_01655 PF01699 Sodium/calcium exchanger protein MIS33_01660 PF00920 Dehydratase family MIS33_01680 PF00133 tRNA synthetases class I (I, L, M and V) MIS33_01680 PF10458 Valyl tRNA synthetase tRNA binding arm MIS33_01680 PF08264 Anticodon-binding domain of tRNA MIS33_01695 PF01432 Peptidase family M3 MIS33_01705 PF07517 SecA DEAD-like domain MIS33_01705 PF07516 SecA Wing and Scaffold domain MIS33_01705 PF01043 SecA preprotein cross-linking domain MIS33_01705 PF02810 SEC-C motif MIS33_01725 PF01814 Hemerythrin HHE cation binding domain MIS33_01730 PF01963 TraB family MIS33_01735 PF01136 Peptidase family U32 MIS33_01735 PF16325 Peptidase family U32 C-terminal domain MIS33_01745 PF00535 Glycosyl transferase family 2 MIS33_01750 PF02563 Polysaccharide biosynthesis/export protein MIS33_01760 PF01061 ABC-2 type transporter MIS33_01765 PF00005 ABC transporter MIS33_01785 PF00127 Copper binding proteins, plastocyanin/azurin family MIS33_01820 PF00483 Nucleotidyl transferase MIS33_01840 PF02272 DHHA1 domain MIS33_01840 PF17768 RecJ OB domain MIS33_01840 PF01368 DHH family MIS33_01845 PF00300 Histidine phosphatase superfamily (branch 1) MIS33_01855 PF02632 BioY family MIS33_01865 PF02492 CobW/HypB/UreG, nucleotide-binding domain MIS33_01865 PF07683 Cobalamin synthesis protein cobW C-terminal domain MIS33_01870 PF00535 Glycosyl transferase family 2 MIS33_01885 PF04357 TamB, inner membrane protein subunit of TAM complex MIS33_01895 PF00886 Ribosomal protein S16 MIS33_01900 PF01782 RimM N-terminal domain MIS33_01900 PF05239 PRC-barrel domain MIS33_01905 PF01746 tRNA (Guanine-1)-methyltransferase MIS33_01910 PF01245 Ribosomal protein L19 MIS33_01915 PF02545 Maf-like protein MIS33_01920 PF02620 Large ribosomal RNA subunit accumulation protein YceD MIS33_01925 PF01783 Ribosomal L32p protein family MIS33_01935 PF02504 Fatty acid synthesis protein MIS33_01940 PF00267 Gram-negative porin MIS33_01950 PF07664 Ferrous iron transport protein B C terminus MIS33_01950 PF07670 Nucleoside recognition MIS33_01950 PF02421 Ferrous iron transport protein B MIS33_01960 PF01206 Sulfurtransferase TusA MIS33_01970 PF02580 D-Tyr-tRNA(Tyr) deacylase MIS33_01975 PF00842 Alanine racemase, C-terminal domain MIS33_01975 PF01168 Alanine racemase, N-terminal domain MIS33_01980 PF01042 Endoribonuclease L-PSP MIS33_01985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MIS33_01995 PF00483 Nucleotidyl transferase MIS33_02000 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS33_02005 PF02649 Type I GTP cyclohydrolase folE2 MIS33_02015 PF00588 SpoU rRNA Methylase family MIS33_02020 PF00156 Phosphoribosyl transferase domain MIS33_02025 PF01769 Divalent cation transporter MIS33_02025 PF00571 CBS domain MIS33_02025 PF03448 MgtE intracellular N domain MIS33_02030 PF00291 Pyridoxal-phosphate dependent enzyme MIS33_02030 PF14821 Threonine synthase N terminus MIS33_02035 PF13416 Bacterial extracellular solute-binding protein MIS33_02040 PF00166 Chaperonin 10 Kd subunit MIS33_02050 PF00118 TCP-1/cpn60 chaperonin family MIS33_02055 PF11734 TilS substrate C-terminal domain MIS33_02055 PF01171 PP-loop family MIS33_02055 PF00156 Phosphoribosyl transferase domain MIS33_02065 PF00893 Small Multidrug Resistance protein MIS33_02085 PF12706 Beta-lactamase superfamily domain MIS33_02090 PF01037 Lrp/AsnC ligand binding domain MIS33_02115 PF01235 Sodium:alanine symporter family MIS33_02120 PF00255 Glutathione peroxidase MIS33_02130 PF00072 Response regulator receiver domain MIS33_02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_02135 PF01627 Hpt domain MIS33_02135 PF07194 P2 response regulator binding domain MIS33_02135 PF02895 Signal transducing histidine kinase, homodimeric domain MIS33_02135 PF01584 CheW-like domain MIS33_02140 PF01709 Transcriptional regulator MIS33_02150 PF00119 ATP synthase A chain MIS33_02155 PF00137 ATP synthase subunit C MIS33_02160 PF00430 ATP synthase B/B' CF(0) MIS33_02165 PF00213 ATP synthase delta (OSCP) subunit MIS33_02170 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIS33_02170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS33_02170 PF00306 ATP synthase alpha/beta chain, C terminal domain MIS33_02175 PF00231 ATP synthase MIS33_02180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS33_02180 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIS33_02185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MIS33_02190 PF01336 OB-fold nucleic acid binding domain MIS33_02190 PF02811 PHP domain MIS33_02190 PF14579 Helix-hairpin-helix motif MIS33_02190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MIS33_02190 PF07733 Bacterial DNA polymerase III alpha NTPase domain MIS33_02200 PF03144 Elongation factor Tu domain 2 MIS33_02200 PF16658 Class II release factor RF3, C-terminal domain MIS33_02200 PF00009 Elongation factor Tu GTP binding domain MIS33_02205 PF00158 Sigma-54 interaction domain MIS33_02205 PF06956 Regulator of RNA terminal phosphate cyclase MIS33_02230 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family MIS33_02250 PF03309 Type III pantothenate kinase MIS33_02250 PF02237 Biotin protein ligase C terminal domain MIS33_02250 PF03099 Biotin/lipoate A/B protein ligase family MIS33_02255 PF04228 Putative neutral zinc metallopeptidase MIS33_02295 PF01386 Ribosomal L25p family MIS33_02295 PF14693 Ribosomal protein TL5, C-terminal domain MIS33_02300 PF14572 Phosphoribosyl synthetase-associated domain MIS33_02300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MIS33_02315 PF08544 GHMP kinases C terminal MIS33_02315 PF00288 GHMP kinases N terminal domain MIS33_02325 PF03550 Outer membrane lipoprotein LolB MIS33_02335 PF12147 Putative methyltransferase MIS33_02335 PF12146 Serine aminopeptidase, S33 MIS33_02345 PF03739 Lipopolysaccharide export system permease LptF/LptG MIS33_02375 PF13180 PDZ domain MIS33_02375 PF03572 Peptidase family S41 MIS33_02380 PF17946 RecC C-terminal domain MIS33_02415 PF02470 MlaD protein MIS33_02420 PF02405 Permease MlaE MIS33_02435 PF00005 ABC transporter MIS33_02455 PF00925 GTP cyclohydrolase II MIS33_02470 PF04474 Protein of unknown function (DUF554) MIS33_02475 PF01966 HD domain MIS33_02490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIS33_02495 PF01119 DNA mismatch repair protein, C-terminal domain MIS33_02495 PF08676 MutL C terminal dimerisation domain MIS33_02505 PF08335 GlnD PII-uridylyltransferase MIS33_02505 PF03710 Glutamate-ammonia ligase adenylyltransferase MIS33_02510 PF01430 Hsp33 protein MIS33_02530 PF01784 NIF3 (NGG1p interacting factor 3) MIS33_02535 PF00355 Rieske [2Fe-2S] domain MIS33_02535 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MIS33_02540 PF00033 Cytochrome b/b6/petB MIS33_02540 PF00032 Cytochrome b(C-terminal)/b6/petD MIS33_02545 PF02167 Cytochrome C1 family MIS33_02580 PF00589 Phage integrase family MIS33_02580 PF02899 Phage integrase, N-terminal SAM-like domain MIS33_02590 PF00950 ABC 3 transport family MIS33_02610 PF04977 Septum formation initiator MIS33_02615 PF00113 Enolase, C-terminal TIM barrel domain MIS33_02615 PF03952 Enolase, N-terminal domain MIS33_02635 PF01649 Ribosomal protein S20 MIS33_02640 PF03831 PhnA domain MIS33_02640 PF08274 PhnA Zinc-Ribbon MIS33_02650 PF01636 Phosphotransferase enzyme family MIS33_02655 PF04453 LPS transport system D MIS33_02660 PF00639 PPIC-type PPIASE domain MIS33_02660 PF09312 SurA N-terminal domain MIS33_02670 PF17848 Acetyl-coA carboxylase zinc finger domain MIS33_02670 PF01039 Carboxyl transferase domain MIS33_02675 PF01975 Survival protein SurE MIS33_02680 PF01451 Low molecular weight phosphotyrosine protein phosphatase MIS33_02705 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_02710 PF00012 Hsp70 protein MIS33_02730 PF01618 MotA/TolQ/ExbB proton channel family MIS33_02735 PF02472 Biopolymer transport protein ExbD/TolR MIS33_02750 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_02755 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_02760 PF00005 ABC transporter MIS33_02765 PF05683 Fumarase C-terminus MIS33_02765 PF05681 Fumarate hydratase (Fumerase) MIS33_02775 PF00890 FAD binding domain MIS33_02775 PF02910 Fumarate reductase flavoprotein C-term MIS33_02780 PF10531 SLBB domain MIS33_02780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MIS33_02780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MIS33_02785 PF00939 Sodium:sulfate symporter transmembrane region MIS33_02805 PF00929 Exonuclease MIS33_02805 PF01541 GIY-YIG catalytic domain MIS33_02810 PF00719 Inorganic pyrophosphatase MIS33_02815 PF00772 DnaB-like helicase N terminal domain MIS33_02815 PF03796 DnaB-like helicase C terminal domain MIS33_02855 PF01668 SmpB protein MIS33_02865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MIS33_02875 PF00885 6,7-dimethyl-8-ribityllumazine synthase MIS33_02880 PF01029 NusB family MIS33_02895 PF03129 Anticodon binding domain MIS33_02895 PF02824 TGS domain MIS33_02895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS33_02895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIS33_02900 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_02910 PF01170 Putative RNA methylase family UPF0020 MIS33_02910 PF02926 THUMP domain MIS33_02930 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIS33_02945 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MIS33_02945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIS33_02950 PF00312 Ribosomal protein S15 MIS33_02960 PF02677 Epoxyqueuosine reductase QueH MIS33_02965 PF02824 TGS domain MIS33_02965 PF04607 Region found in RelA / SpoT proteins MIS33_02965 PF13291 ACT domain MIS33_02985 PF00216 Bacterial DNA-binding protein MIS33_02990 PF00575 S1 RNA binding domain MIS33_02995 PF02224 Cytidylate kinase MIS33_03000 PF00923 Transaldolase/Fructose-6-phosphate aldolase MIS33_03005 PF00682 HMGL-like MIS33_03005 PF08502 LeuA allosteric (dimerisation) domain MIS33_03010 PF03150 Di-haem cytochrome c peroxidase MIS33_03010 PF00034 Cytochrome c MIS33_03015 PF08264 Anticodon-binding domain of tRNA MIS33_03015 PF09334 tRNA synthetases class I (M) MIS33_03015 PF01588 Putative tRNA binding domain MIS33_03025 PF13746 4Fe-4S dicluster domain MIS33_03025 PF12801 4Fe-4S binding domain MIS33_03025 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MIS33_03030 PF04055 Radical SAM superfamily MIS33_03030 PF06969 HemN C-terminal domain MIS33_03035 PF04325 Protein of unknown function (DUF465) MIS33_03040 PF02223 Thymidylate kinase MIS33_03050 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS33_03060 PF04279 Intracellular septation protein A MIS33_03065 PF03795 YCII-related domain MIS33_03080 PF00561 alpha/beta hydrolase fold MIS33_03090 PF00707 Translation initiation factor IF-3, C-terminal domain MIS33_03090 PF05198 Translation initiation factor IF-3, N-terminal domain MIS33_03095 PF01632 Ribosomal protein L35 MIS33_03100 PF00453 Ribosomal protein L20 MIS33_03105 PF14437 MafB19-like deaminase MIS33_03110 PF04545 Sigma-70, region 4 MIS33_03110 PF04542 Sigma-70 region 2 MIS33_03110 PF00140 Sigma-70 factor, region 1.2 MIS33_03115 PF01702 Queuine tRNA-ribosyltransferase MIS33_03120 PF02660 Glycerol-3-phosphate acyltransferase MIS33_03125 PF02152 Dihydroneopterin aldolase MIS33_03130 PF00850 Histone deacetylase domain MIS33_03140 PF01208 Uroporphyrinogen decarboxylase (URO-D) MIS33_03150 PF02535 ZIP Zinc transporter MIS33_03155 PF00398 Ribosomal RNA adenine dimethylase MIS33_03180 PF00005 ABC transporter MIS33_03185 PF03605 Anaerobic c4-dicarboxylate membrane transporter MIS33_03190 PF00593 TonB dependent receptor MIS33_03190 PF07715 TonB-dependent Receptor Plug Domain MIS33_03195 PF00149 Calcineurin-like phosphoesterase MIS33_03200 PF16193 AAA C-terminal domain MIS33_03200 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_03200 PF12002 MgsA AAA+ ATPase C terminal MIS33_03230 PF01066 CDP-alcohol phosphatidyltransferase MIS33_03235 PF01476 LysM domain MIS33_03235 PF01476 LysM domain MIS33_03235 PF01464 Transglycosylase SLT domain MIS33_03235 PF01464 Transglycosylase SLT domain MIS33_03250 PF13662 Toprim domain MIS33_03250 PF02132 RecR protein MIS33_03255 PF00692 dUTPase MIS33_03265 PF04381 Putative exonuclease, RdgC MIS33_03285 PF00270 DEAD/DEAH box helicase MIS33_03285 PF00271 Helicase conserved C-terminal domain MIS33_03290 PF04060 Putative Fe-S cluster MIS33_03295 PF02195 ParB-like nuclease domain MIS33_03295 PF17762 HTH domain found in ParB protein MIS33_03300 PF01467 Cytidylyltransferase-like MIS33_03310 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MIS33_03340 PF16363 GDP-mannose 4,6 dehydratase MIS33_03345 PF00005 ABC transporter MIS33_03350 PF04321 RmlD substrate binding domain MIS33_03360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MIS33_03365 PF00849 RNA pseudouridylate synthase MIS33_03370 PF00750 tRNA synthetases class I (R) MIS33_03370 PF05746 DALR anticodon binding domain MIS33_03370 PF03485 Arginyl tRNA synthetase N terminal domain MIS33_03375 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIS33_03375 PF00588 SpoU rRNA Methylase family MIS33_03385 PF00005 ABC transporter MIS33_03385 PF00664 ABC transporter transmembrane region MIS33_03390 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_03395 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_03400 PF00005 ABC transporter MIS33_03400 PF08402 TOBE domain MIS33_03405 PF02080 TrkA-C domain MIS33_03405 PF02254 TrkA-N domain MIS33_03420 PF00588 SpoU rRNA Methylase family MIS33_03420 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIS33_03440 PF00575 S1 RNA binding domain MIS33_03440 PF09371 Tex-like protein N-terminal domain MIS33_03440 PF16921 Tex protein YqgF-like domain MIS33_03440 PF17674 HHH domain MIS33_03460 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_03465 PF00933 Glycosyl hydrolase family 3 N terminal domain MIS33_03470 PF01026 TatD related DNase MIS33_03480 PF09115 DNA polymerase III, delta subunit, C terminal MIS33_03515 PF02403 Seryl-tRNA synthetase N-terminal domain MIS33_03515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS33_03530 PF04403 Paraquat-inducible protein A MIS33_03535 PF00440 Bacterial regulatory proteins, tetR family MIS33_03535 PF08361 MAATS-type transcriptional repressor, C-terminal region MIS33_03540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS33_03540 PF00529 HlyD membrane-fusion protein of T1SS MIS33_03545 PF00873 AcrB/AcrD/AcrF family MIS33_03555 PF01098 Cell cycle protein MIS33_03560 PF04101 Glycosyltransferase family 28 C-terminal domain MIS33_03560 PF03033 Glycosyltransferase family 28 N-terminal domain MIS33_03565 PF02541 Ppx/GppA phosphatase family MIS33_03575 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_03590 PF01850 PIN domain MIS33_03595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MIS33_03605 PF12344 Ultra-violet resistance protein B MIS33_03605 PF17757 UvrB interaction domain MIS33_03605 PF02151 UvrB/uvrC motif MIS33_03605 PF04851 Type III restriction enzyme, res subunit MIS33_03605 PF00271 Helicase conserved C-terminal domain MIS33_03620 PF00209 Sodium:neurotransmitter symporter family MIS33_03625 PF01022 Bacterial regulatory protein, arsR family MIS33_03630 PF11127 Protein of unknown function (DUF2892) MIS33_03630 PF00581 Rhodanese-like domain MIS33_03640 PF00464 Serine hydroxymethyltransferase MIS33_03645 PF02785 Biotin carboxylase C-terminal domain MIS33_03645 PF00289 Biotin carboxylase, N-terminal domain MIS33_03645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MIS33_03660 PF00364 Biotin-requiring enzyme MIS33_03675 PF00581 Rhodanese-like domain MIS33_03680 PF02652 L-lactate permease MIS33_03685 PF02589 LUD domain MIS33_03685 PF13183 4Fe-4S dicluster domain MIS33_03685 PF11870 Domain of unknown function (DUF3390) MIS33_03690 PF02589 LUD domain MIS33_03695 PF02754 Cysteine-rich domain MIS33_03700 PF17764 3′ DNA-binding domain (3′BD) MIS33_03700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MIS33_03700 PF18074 Primosomal protein N C-terminal domain MIS33_03700 PF00271 Helicase conserved C-terminal domain MIS33_03700 PF00270 DEAD/DEAH box helicase MIS33_03705 PF02219 Methylenetetrahydrofolate reductase MIS33_03710 PF08267 Cobalamin-independent synthase, N-terminal domain MIS33_03710 PF01717 Cobalamin-independent synthase, Catalytic domain MIS33_03715 PF11967 Recombination protein O N terminal MIS33_03715 PF02565 Recombination protein O C terminal MIS33_03720 PF17191 RecG wedge domain MIS33_03720 PF00271 Helicase conserved C-terminal domain MIS33_03720 PF00270 DEAD/DEAH box helicase MIS33_03725 PF01551 Peptidase family M23 MIS33_03735 PF00557 Metallopeptidase family M24 MIS33_03740 PF02673 Bacitracin resistance protein BacA MIS33_03755 PF01078 Magnesium chelatase, subunit ChlI MIS33_03755 PF13335 Magnesium chelatase, subunit ChlI C-terminal MIS33_03760 PF04380 Membrane fusogenic activity MIS33_03765 PF02773 S-adenosylmethionine synthetase, C-terminal domain MIS33_03765 PF02772 S-adenosylmethionine synthetase, central domain MIS33_03765 PF00438 S-adenosylmethionine synthetase, N-terminal domain MIS33_03770 PF00155 Aminotransferase class I and II MIS33_03775 PF03553 Na+/H+ antiporter family MIS33_03780 PF02896 PEP-utilising enzyme, TIM barrel domain MIS33_03780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MIS33_03780 PF00391 PEP-utilising enzyme, mobile domain MIS33_03795 PF02899 Phage integrase, N-terminal SAM-like domain MIS33_03795 PF00589 Phage integrase family MIS33_03810 PF02540 NAD synthase MIS33_03810 PF00958 GMP synthase C terminal domain MIS33_03810 PF00117 Glutamine amidotransferase class-I MIS33_03820 PF01258 Prokaryotic dksA/traR C4-type zinc finger MIS33_03830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS33_03830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_03835 PF01029 NusB family MIS33_03835 PF01189 16S rRNA methyltransferase RsmB/F MIS33_03845 PF00989 PAS fold MIS33_03845 PF00512 His Kinase A (phospho-acceptor) domain MIS33_03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_03845 PF00672 HAMP domain MIS33_03850 PF00072 Response regulator receiver domain MIS33_03850 PF00158 Sigma-54 interaction domain MIS33_03850 PF02954 Bacterial regulatory protein, Fis family MIS33_03855 PF03102 NeuB family MIS33_03855 PF08666 SAF domain MIS33_03860 PF02687 FtsX-like permease family MIS33_03860 PF12704 MacB-like periplasmic core domain MIS33_03865 PF00005 ABC transporter MIS33_03880 PF02253 Phospholipase A1 MIS33_03890 PF14338 Mrr N-terminal domain MIS33_03890 PF04471 Restriction endonuclease MIS33_03895 PF01336 OB-fold nucleic acid binding domain MIS33_03895 PF00152 tRNA synthetases class II (D, K and N) MIS33_03895 PF02938 GAD domain MIS33_03900 PF02595 Glycerate kinase family MIS33_03915 PF11898 Domain of unknown function (DUF3418) MIS33_03915 PF00270 DEAD/DEAH box helicase MIS33_03915 PF00271 Helicase conserved C-terminal domain MIS33_03915 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MIS33_03915 PF04408 Helicase associated domain (HA2) MIS33_03925 PF01797 Transposase IS200 like MIS33_03930 PF00270 DEAD/DEAH box helicase MIS33_03930 PF11898 Domain of unknown function (DUF3418) MIS33_03930 PF04408 Helicase associated domain (HA2) MIS33_03930 PF00271 Helicase conserved C-terminal domain MIS33_03930 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MIS33_03940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MIS33_03945 PF01850 PIN domain MIS33_03975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MIS33_03975 PF06827 Zinc finger found in FPG and IleRS MIS33_03975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MIS33_03985 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_03990 PF02447 GntP family permease MIS33_03995 PF12724 Flavodoxin domain MIS33_04000 PF00311 Phosphoenolpyruvate carboxylase MIS33_04005 PF00128 Alpha amylase, catalytic domain MIS33_04010 PF17209 Hfq protein MIS33_04020 PF01551 Peptidase family M23 MIS33_04020 PF01476 LysM domain MIS33_04030 PF00768 D-alanyl-D-alanine carboxypeptidase MIS33_04030 PF07943 Penicillin-binding protein 5, C-terminal domain MIS33_04035 PF10518 TAT (twin-arginine translocation) pathway signal sequence MIS33_04035 PF00149 Calcineurin-like phosphoesterase MIS33_04045 PF01521 Iron-sulphur cluster biosynthesis MIS33_04050 PF01592 NifU-like N terminal domain MIS33_04060 PF00266 Aminotransferase class-V MIS33_04065 PF02082 Transcriptional regulator MIS33_04070 PF02664 S-Ribosylhomocysteinase (LuxS) MIS33_04075 PF01048 Phosphorylase superfamily MIS33_04080 PF01381 Helix-turn-helix MIS33_04110 PF00768 D-alanyl-D-alanine carboxypeptidase MIS33_04115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIS33_04115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIS33_04115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIS33_04115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIS33_04120 PF07687 Peptidase dimerisation domain MIS33_04120 PF01546 Peptidase family M20/M25/M40 MIS33_04125 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MIS33_04125 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MIS33_04130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MIS33_04130 PF01409 tRNA synthetases class II core domain (F) MIS33_04150 PF03483 B3/4 domain MIS33_04150 PF03147 Ferredoxin-fold anticodon binding domain MIS33_04150 PF01588 Putative tRNA binding domain MIS33_04150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MIS33_04150 PF03484 tRNA synthetase B5 domain MIS33_04160 PF13193 AMP-binding enzyme C-terminal domain MIS33_04160 PF00501 AMP-binding enzyme MIS33_04165 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_04170 PF01476 LysM domain MIS33_04175 PF01327 Polypeptide deformylase MIS33_04230 PF17676 LD-carboxypeptidase C-terminal domain MIS33_04230 PF02016 LD-carboxypeptidase N-terminal domain MIS33_04235 PF00800 Prephenate dehydratase MIS33_04235 PF01817 Chorismate mutase type II MIS33_04235 PF01842 ACT domain MIS33_04240 PF12805 FUSC-like inner membrane protein yccS MIS33_04245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIS33_04245 PF02770 Acyl-CoA dehydrogenase, middle domain MIS33_04245 PF12806 Acetyl-CoA dehydrogenase C-terminal like MIS33_04245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIS33_04250 PF00403 Heavy-metal-associated domain MIS33_04265 PF00403 Heavy-metal-associated domain MIS33_04270 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) MIS33_04275 PF00586 AIR synthase related protein, N-terminal domain MIS33_04275 PF02769 AIR synthase related protein, C-terminal domain MIS33_04285 PF02719 Polysaccharide biosynthesis protein MIS33_04290 PF01207 Dihydrouridine synthase (Dus) MIS33_04305 PF00291 Pyridoxal-phosphate dependent enzyme MIS33_04310 PF07726 ATPase family associated with various cellular activities (AAA) MIS33_04310 PF17863 AAA lid domain MIS33_04315 PF02780 Transketolase, C-terminal domain MIS33_04315 PF02779 Transketolase, pyrimidine binding domain MIS33_04315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MIS33_04320 PF00156 Phosphoribosyl transferase domain MIS33_04335 PF08245 Mur ligase middle domain MIS33_04335 PF02875 Mur ligase family, glutamate ligase domain MIS33_04345 PF05175 Methyltransferase small domain MIS33_04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_04360 PF08275 DNA primase catalytic core, N-terminal domain MIS33_04360 PF08278 DNA primase DnaG DnaB-binding MIS33_04360 PF10410 DnaB-helicase binding domain of primase MIS33_04360 PF01807 CHC2 zinc finger MIS33_04365 PF02872 5'-nucleotidase, C-terminal domain MIS33_04365 PF00149 Calcineurin-like phosphoesterase MIS33_04370 PF00664 ABC transporter transmembrane region MIS33_04370 PF00005 ABC transporter MIS33_04370 PF03412 Peptidase C39 family MIS33_04375 PF01725 Ham1 family MIS33_04380 PF00578 AhpC/TSA family MIS33_04385 PF07690 Major Facilitator Superfamily MIS33_04390 PF13488 Glycine zipper MIS33_04390 PF00691 OmpA family MIS33_04405 PF07085 DRTGG domain MIS33_04405 PF01515 Phosphate acetyl/butaryl transferase MIS33_04410 PF02659 Putative manganese efflux pump MIS33_04420 PF03601 Conserved hypothetical protein 698 MIS33_04425 PF07021 Methionine biosynthesis protein MetW MIS33_04425 PF00561 alpha/beta hydrolase fold MIS33_04435 PF00561 alpha/beta hydrolase fold MIS33_04440 PF13291 ACT domain MIS33_04440 PF04607 Region found in RelA / SpoT proteins MIS33_04440 PF02824 TGS domain MIS33_04445 PF01192 RNA polymerase Rpb6 MIS33_04450 PF00625 Guanylate kinase MIS33_04455 PF00834 Ribulose-phosphate 3 epimerase family MIS33_04460 PF10576 Iron-sulfur binding domain of endonuclease III MIS33_04460 PF00633 Helix-hairpin-helix motif MIS33_04460 PF00730 HhH-GPD superfamily base excision DNA repair protein MIS33_04460 PF14815 NUDIX domain MIS33_04465 PF01026 TatD related DNase MIS33_04470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MIS33_04470 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MIS33_04475 PF01040 UbiA prenyltransferase family MIS33_04480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIS33_04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS33_04485 PF00155 Aminotransferase class I and II MIS33_04505 PF00149 Calcineurin-like phosphoesterase MIS33_04515 PF00107 Zinc-binding dehydrogenase MIS33_04515 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_04520 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_04530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MIS33_04530 PF02769 AIR synthase related protein, C-terminal domain MIS33_04530 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MIS33_04535 PF00175 Oxidoreductase NAD-binding domain MIS33_04535 PF00970 Oxidoreductase FAD-binding domain MIS33_04545 PF13361 UvrD-like helicase C-terminal domain MIS33_04545 PF00580 UvrD/REP helicase N-terminal domain MIS33_04570 PF17092 Penicillin-binding protein OB-like domain MIS33_04570 PF00912 Transglycosylase MIS33_04570 PF00905 Penicillin binding protein transpeptidase domain MIS33_04595 PF11741 AMIN domain MIS33_04595 PF00263 Bacterial type II and III secretion system protein MIS33_04595 PF03958 Bacterial type II/III secretion system short domain MIS33_04595 PF07660 Secretin and TonB N terminus short domain MIS33_04600 PF01202 Shikimate kinase MIS33_04605 PF01761 3-dehydroquinate synthase MIS33_04615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIS33_04620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIS33_04625 PF00120 Glutamine synthetase, catalytic domain MIS33_04625 PF03951 Glutamine synthetase, beta-Grasp domain MIS33_04645 PF01180 Dihydroorotate dehydrogenase MIS33_04650 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_04650 PF17862 AAA+ lid domain MIS33_04650 PF06480 FtsH Extracellular MIS33_04650 PF01434 Peptidase family M41 MIS33_04655 PF01728 FtsJ-like methyltransferase MIS33_04660 PF00970 Oxidoreductase FAD-binding domain MIS33_04660 PF00175 Oxidoreductase NAD-binding domain MIS33_04670 PF05661 Protein of unknown function (DUF808) MIS33_04690 PF00266 Aminotransferase class-V MIS33_04695 PF00815 Histidinol dehydrogenase MIS33_04705 PF01634 ATP phosphoribosyltransferase MIS33_04710 PF02630 SCO1/SenC MIS33_04715 PF00912 Transglycosylase MIS33_04720 PF08501 Shikimate dehydrogenase substrate binding domain MIS33_04720 PF01488 Shikimate / quinate 5-dehydrogenase MIS33_04720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MIS33_04725 PF03471 Transporter associated domain MIS33_04725 PF00571 CBS domain MIS33_04730 PF02130 Uncharacterized protein family UPF0054 MIS33_04735 PF05175 Methyltransferase small domain MIS33_04740 PF00005 ABC transporter MIS33_04740 PF06472 ABC transporter transmembrane region 2 MIS33_04745 PF00593 TonB dependent receptor MIS33_04745 PF07715 TonB-dependent Receptor Plug Domain MIS33_04750 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MIS33_04750 PF01464 Transglycosylase SLT domain MIS33_04760 PF00248 Aldo/keto reductase family MIS33_04775 PF00180 Isocitrate/isopropylmalate dehydrogenase MIS33_04780 PF03616 Sodium/glutamate symporter MIS33_04790 PF02698 DUF218 domain MIS33_04795 PF00218 Indole-3-glycerol phosphate synthase MIS33_04805 PF03279 Bacterial lipid A biosynthesis acyltransferase MIS33_04810 PF00155 Aminotransferase class I and II MIS33_04840 PF02675 S-adenosylmethionine decarboxylase MIS33_04850 PF07690 Major Facilitator Superfamily MIS33_04860 PF01433 Peptidase family M1 domain MIS33_04860 PF11940 Domain of unknown function (DUF3458) Ig-like fold MIS33_04860 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MIS33_04880 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MIS33_04885 PF01523 Putative modulator of DNA gyrase MIS33_04895 PF02637 GatB domain MIS33_04895 PF02934 GatB/GatE catalytic domain MIS33_04905 PF08245 Mur ligase middle domain MIS33_04905 PF02875 Mur ligase family, glutamate ligase domain MIS33_04910 PF04076 Bacterial OB fold (BOF) protein MIS33_04930 PF03060 Nitronate monooxygenase MIS33_04940 PF03447 Homoserine dehydrogenase, NAD binding domain MIS33_04940 PF00742 Homoserine dehydrogenase MIS33_04940 PF01842 ACT domain MIS33_04945 PF02779 Transketolase, pyrimidine binding domain MIS33_04945 PF00456 Transketolase, thiamine diphosphate binding domain MIS33_04945 PF02780 Transketolase, C-terminal domain MIS33_04950 PF00324 Amino acid permease MIS33_04955 PF01171 PP-loop family MIS33_04970 PF08340 Domain of unknown function (DUF1732) MIS33_04970 PF03755 YicC-like family, N-terminal region MIS33_04975 PF00849 RNA pseudouridylate synthase MIS33_04980 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS33_04985 PF02817 e3 binding domain MIS33_04985 PF00364 Biotin-requiring enzyme MIS33_04985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MIS33_04990 PF03891 Domain of unknown function (DUF333) MIS33_04995 PF00456 Transketolase, thiamine diphosphate binding domain MIS33_04995 PF17831 Pyruvate dehydrogenase E1 component middle domain MIS33_05000 PF02386 Cation transport protein MIS33_05015 PF00692 dUTPase MIS33_05040 PF01521 Iron-sulphur cluster biosynthesis MIS33_05045 PF00575 S1 RNA binding domain MIS33_05045 PF10150 Ribonuclease E/G family MIS33_05055 PF04551 GcpE protein MIS33_05070 PF04055 Radical SAM superfamily MIS33_05075 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_05080 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_05085 PF00334 Nucleoside diphosphate kinase MIS33_05095 PF01593 Flavin containing amine oxidoreductase MIS33_05100 PF00106 short chain dehydrogenase MIS33_05105 PF01791 DeoC/LacD family aldolase MIS33_05120 PF14622 Ribonuclease-III-like MIS33_05120 PF00035 Double-stranded RNA binding motif MIS33_05125 PF00156 Phosphoribosyl transferase domain MIS33_05145 PF01926 50S ribosome-binding GTPase MIS33_05145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MIS33_05155 PF09976 Tetratricopeptide repeat-like domain MIS33_05160 PF03129 Anticodon binding domain MIS33_05160 PF13393 Histidyl-tRNA synthetase MIS33_05175 PF00849 RNA pseudouridylate synthase MIS33_05175 PF01479 S4 domain MIS33_05180 PF01597 Glycine cleavage H-protein MIS33_05185 PF00698 Acyl transferase domain MIS33_05210 PF00294 pfkB family carbohydrate kinase MIS33_05220 PF00551 Formyl transferase MIS33_05220 PF02911 Formyl transferase, C-terminal domain MIS33_05230 PF02441 Flavoprotein MIS33_05240 PF10609 NUBPL iron-transfer P-loop NTPase MIS33_05245 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MIS33_05250 PF01502 Phosphoribosyl-AMP cyclohydrolase MIS33_05255 PF05981 CreA protein MIS33_05260 PF04079 Segregation and condensation complex subunit ScpB MIS33_05265 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MIS33_05270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MIS33_05270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MIS33_05275 PF00575 S1 RNA binding domain MIS33_05275 PF00013 KH domain MIS33_05275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MIS33_05275 PF01138 3' exoribonuclease family, domain 1 MIS33_05275 PF03725 3' exoribonuclease family, domain 2 MIS33_05280 PF02699 Preprotein translocase subunit MIS33_05285 PF02355 Protein export membrane protein MIS33_05285 PF13721 SecD export protein N-terminal TM region MIS33_05285 PF07549 SecD/SecF GG Motif MIS33_05290 PF07549 SecD/SecF GG Motif MIS33_05290 PF02355 Protein export membrane protein MIS33_05295 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS33_05305 PF01138 3' exoribonuclease family, domain 1 MIS33_05305 PF03725 3' exoribonuclease family, domain 2 MIS33_05315 PF01479 S4 domain MIS33_05325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MIS33_05330 PF02348 Cytidylyltransferase MIS33_05335 PF04575 Protein of unknown function (DUF560) MIS33_05345 PF17483 C-lobe handle domain of Tf-binding protein B MIS33_05345 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B MIS33_05345 PF17484 N-Lobe handle Tf-binding protein B MIS33_05355 PF03956 Lysine exporter LysO MIS33_05360 PF00814 Glycoprotease family MIS33_05365 PF02021 Uncharacterised protein family UPF0102 MIS33_05370 PF13580 SIS domain MIS33_05375 PF04972 BON domain MIS33_05390 PF00005 ABC transporter MIS33_05390 PF12848 ABC transporter MIS33_05400 PF03167 Uracil DNA glycosylase superfamily MIS33_05405 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MIS33_05410 PF01384 Phosphate transporter family MIS33_05415 PF00578 AhpC/TSA family MIS33_05425 PF01926 50S ribosome-binding GTPase MIS33_05430 PF06039 Malate:quinone oxidoreductase (Mqo) MIS33_05435 PF00291 Pyridoxal-phosphate dependent enzyme MIS33_05435 PF00585 C-terminal regulatory domain of Threonine dehydratase MIS33_05455 PF00075 RNase H MIS33_05460 PF00226 DnaJ domain MIS33_05460 PF01556 DnaJ C terminal domain MIS33_05460 PF00684 DnaJ central domain MIS33_05470 PF03372 Endonuclease/Exonuclease/phosphatase family MIS33_05475 PF07724 AAA domain (Cdc48 subfamily) MIS33_05475 PF06689 ClpX C4-type zinc finger MIS33_05475 PF10431 C-terminal, D2-small domain, of ClpB protein MIS33_05480 PF01037 Lrp/AsnC ligand binding domain MIS33_05490 PF00005 ABC transporter MIS33_05495 PF00171 Aldehyde dehydrogenase family MIS33_05500 PF00677 Lumazine binding domain MIS33_05505 PF00709 Adenylosuccinate synthetase MIS33_05525 PF13393 Histidyl-tRNA synthetase MIS33_05535 PF01472 PUA domain MIS33_05535 PF00696 Amino acid kinase family MIS33_05540 PF00579 tRNA synthetases class I (W and Y) MIS33_05550 PF01926 50S ribosome-binding GTPase MIS33_05555 PF00034 Cytochrome c MIS33_05560 PF05140 ResB-like family MIS33_05570 PF07963 Prokaryotic N-terminal methylation motif MIS33_05575 PF07963 Prokaryotic N-terminal methylation motif MIS33_05575 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MIS33_05580 PF00205 Thiamine pyrophosphate enzyme, central domain MIS33_05580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MIS33_05580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MIS33_05585 PF10369 Small subunit of acetolactate synthase MIS33_05595 PF00849 RNA pseudouridylate synthase MIS33_05595 PF01479 S4 domain MIS33_05605 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MIS33_05620 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MIS33_05620 PF03900 Porphobilinogen deaminase, C-terminal domain MIS33_05625 PF02082 Transcriptional regulator MIS33_05635 PF03577 Peptidase family C69 MIS33_05640 PF00871 Acetokinase family MIS33_05645 PF01381 Helix-turn-helix MIS33_05650 PF02811 PHP domain MIS33_05665 PF04575 Protein of unknown function (DUF560) MIS33_05670 PF17483 C-lobe handle domain of Tf-binding protein B MIS33_05670 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B MIS33_05670 PF17484 N-Lobe handle Tf-binding protein B MIS33_05675 PF00593 TonB dependent receptor MIS33_05675 PF07715 TonB-dependent Receptor Plug Domain MIS33_05680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIS33_05700 PF00809 Pterin binding enzyme MIS33_05710 PF00437 Type II/IV secretion system protein MIS33_05725 PF14718 Soluble lytic murein transglycosylase L domain MIS33_05725 PF01464 Transglycosylase SLT domain MIS33_05730 PF13417 Glutathione S-transferase, N-terminal domain MIS33_05730 PF04399 Glutaredoxin 2, C terminal domain MIS33_05740 PF00881 Nitroreductase family MIS33_05745 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MIS33_05750 PF01520 N-acetylmuramoyl-L-alanine amidase MIS33_05750 PF11741 AMIN domain MIS33_05755 PF00588 SpoU rRNA Methylase family MIS33_05760 PF00543 Nitrogen regulatory protein P-II MIS33_05765 PF02954 Bacterial regulatory protein, Fis family MIS33_05765 PF00072 Response regulator receiver domain MIS33_05765 PF00158 Sigma-54 interaction domain MIS33_05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_05770 PF00512 His Kinase A (phospho-acceptor) domain MIS33_05775 PF00521 DNA gyrase/topoisomerase IV, subunit A MIS33_05785 PF12706 Beta-lactamase superfamily domain MIS33_05790 PF01509 TruB family pseudouridylate synthase (N terminal domain) MIS33_05790 PF16198 tRNA pseudouridylate synthase B C-terminal domain MIS33_05790 PF09157 Pseudouridine synthase II TruB, C-terminal MIS33_05795 PF09179 TilS substrate binding domain MIS33_05795 PF01171 PP-loop family MIS33_05800 PF00591 Glycosyl transferase family, a/b domain MIS33_05800 PF02885 Glycosyl transferase family, helical bundle domain MIS33_05810 PF00849 RNA pseudouridylate synthase MIS33_05810 PF01479 S4 domain MIS33_05815 PF03772 Competence protein MIS33_05815 PF00753 Metallo-beta-lactamase superfamily MIS33_05820 PF00009 Elongation factor Tu GTP binding domain MIS33_05820 PF03144 Elongation factor Tu domain 2 MIS33_05820 PF00679 Elongation factor G C-terminus MIS33_05830 PF04445 Putative SAM-dependent methyltransferase MIS33_05845 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA MIS33_05865 PF04717 Type VI secretion system, phage-baseplate injector MIS33_05905 PF00691 OmpA family MIS33_05905 PF05736 OprF membrane domain MIS33_05930 PF02796 Helix-turn-helix domain of resolvase MIS33_05930 PF00239 Resolvase, N terminal domain MIS33_05955 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MIS33_06025 PF04717 Type VI secretion system, phage-baseplate injector MIS33_06040 PF04717 Type VI secretion system, phage-baseplate injector MIS33_06045 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_06045 PF07724 AAA domain (Cdc48 subfamily) MIS33_06045 PF17871 AAA lid domain MIS33_06045 PF10431 C-terminal, D2-small domain, of ClpB protein MIS33_06050 PF13614 AAA domain MIS33_06095 PF00589 Phage integrase family MIS33_06095 PF13356 Arm DNA-binding domain MIS33_06100 PF13356 Arm DNA-binding domain MIS33_06100 PF14659 Phage integrase, N-terminal SAM-like domain MIS33_06100 PF00589 Phage integrase family MIS33_06110 PF02547 Queuosine biosynthesis protein MIS33_06115 PF00762 Ferrochelatase MIS33_06120 PF00731 AIR carboxylase MIS33_06135 PF02575 YbaB/EbfC DNA-binding family MIS33_06140 PF00005 ABC transporter MIS33_06140 PF12848 ABC transporter MIS33_06140 PF16326 ABC transporter C-terminal domain MIS33_06145 PF02622 Uncharacterized ACR, COG1678 MIS33_06150 PF03652 Holliday junction resolvase MIS33_06155 PF01501 Glycosyl transferase family 8 MIS33_06160 PF03618 Kinase/pyrophosphorylase MIS33_06165 PF00925 GTP cyclohydrolase II MIS33_06165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MIS33_06180 PF00694 Aconitase C-terminal domain MIS33_06205 PF00330 Aconitase family (aconitate hydratase) MIS33_06215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIS33_06215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIS33_06215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIS33_06215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIS33_06220 PF09335 SNARE associated Golgi protein MIS33_06225 PF02548 Ketopantoate hydroxymethyltransferase MIS33_06240 PF00593 TonB dependent receptor MIS33_06240 PF07715 TonB-dependent Receptor Plug Domain MIS33_06255 PF10509 Galactokinase galactose-binding signature MIS33_06255 PF00288 GHMP kinases N terminal domain MIS33_06255 PF08544 GHMP kinases C terminal MIS33_06260 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MIS33_06260 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MIS33_06265 PF13407 Periplasmic binding protein domain MIS33_06270 PF00005 ABC transporter MIS33_06275 PF02653 Branched-chain amino acid transport system / permease component MIS33_06280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIS33_06280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIS33_06285 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MIS33_06285 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MIS33_06295 PF13419 Haloacid dehalogenase-like hydrolase MIS33_06300 PF02631 RecX family MIS33_06310 PF00849 RNA pseudouridylate synthase MIS33_06310 PF01479 S4 domain MIS33_06325 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS33_06330 PF00268 Ribonucleotide reductase, small chain MIS33_06335 PF01546 Peptidase family M20/M25/M40 MIS33_06335 PF07687 Peptidase dimerisation domain MIS33_06340 PF03449 Transcription elongation factor, N-terminal MIS33_06340 PF01272 Transcription elongation factor, GreA/GreB, C-term MIS33_06345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MIS33_06345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MIS33_06355 PF02233 NAD(P) transhydrogenase beta subunit MIS33_06360 PF01177 Asp/Glu/Hydantoin racemase MIS33_06365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MIS33_06365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MIS33_06365 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MIS33_06375 PF13559 Domain of unknown function (DUF4129) MIS33_06375 PF11992 Domain of unknown function (DUF3488) MIS33_06375 PF01841 Transglutaminase-like superfamily MIS33_06380 PF01636 Phosphotransferase enzyme family MIS33_06385 PF02645 Uncharacterised protein, DegV family COG1307 MIS33_06390 PF01235 Sodium:alanine symporter family MIS33_06395 PF00849 RNA pseudouridylate synthase MIS33_06395 PF01479 S4 domain MIS33_06400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MIS33_06400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MIS33_06405 PF06733 DEAD_2 MIS33_06405 PF13307 Helicase C-terminal domain MIS33_06410 PF00579 tRNA synthetases class I (W and Y) MIS33_06415 PF00462 Glutaredoxin MIS33_06425 PF04073 Aminoacyl-tRNA editing domain MIS33_06425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS33_06425 PF03129 Anticodon binding domain MIS33_06430 PF00892 EamA-like transporter family MIS33_06440 PF02416 mttA/Hcf106 family MIS33_06445 PF02416 mttA/Hcf106 family MIS33_06450 PF00902 Sec-independent protein translocase protein (TatC) MIS33_06455 PF13525 Outer membrane lipoprotein MIS33_06465 PF02954 Bacterial regulatory protein, Fis family MIS33_06470 PF00892 EamA-like transporter family MIS33_06480 PF01808 AICARFT/IMPCHase bienzyme MIS33_06480 PF02142 MGS-like domain MIS33_06490 PF03477 ATP cone domain MIS33_06490 PF02867 Ribonucleotide reductase, barrel domain MIS33_06490 PF00317 Ribonucleotide reductase, all-alpha domain MIS33_06500 PF13538 UvrD-like helicase C-terminal domain MIS33_06505 PF01741 Large-conductance mechanosensitive channel, MscL MIS33_06510 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_06515 PF01207 Dihydrouridine synthase (Dus) MIS33_06520 PF00117 Glutamine amidotransferase class-I MIS33_06525 PF02569 Pantoate-beta-alanine ligase MIS33_06530 PF13145 PPIC-type PPIASE domain MIS33_06535 PF09397 Ftsk gamma domain MIS33_06535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MIS33_06535 PF01580 FtsK/SpoIIIE family MIS33_06535 PF17854 FtsK alpha domain MIS33_06540 PF04452 RNA methyltransferase MIS33_06545 PF00459 Inositol monophosphatase family MIS33_06560 PF00005 ABC transporter MIS33_06560 PF12848 ABC transporter MIS33_06565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS33_06570 PF00216 Bacterial DNA-binding protein MIS33_06575 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_06575 PF05362 Lon protease (S16) C-terminal proteolytic domain MIS33_06575 PF02190 ATP-dependent protease La (LON) substrate-binding domain MIS33_06590 PF04390 Lipopolysaccharide-assembly MIS33_06595 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MIS33_06600 PF01648 4'-phosphopantetheinyl transferase superfamily MIS33_06605 PF12848 ABC transporter MIS33_06605 PF00005 ABC transporter MIS33_06615 PF10688 Bacterial inner membrane protein MIS33_06620 PF01926 50S ribosome-binding GTPase MIS33_06620 PF07650 KH domain MIS33_06625 PF06962 Putative rRNA methylase MIS33_06630 PF02578 Multi-copper polyphenol oxidoreductase laccase MIS33_06640 PF00293 NUDIX domain MIS33_06660 PF01292 Prokaryotic cytochrome b561 MIS33_06665 PF02666 Phosphatidylserine decarboxylase MIS33_06675 PF02463 RecF/RecN/SMC N terminal domain MIS33_06705 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS33_06715 PF05958 tRNA (Uracil-5-)-methyltransferase MIS33_06725 PF10502 Signal peptidase, peptidase S26 MIS33_06730 PF02321 Outer membrane efflux protein MIS33_06735 PF00005 ABC transporter MIS33_06735 PF02687 FtsX-like permease family MIS33_06735 PF12704 MacB-like periplasmic core domain MIS33_06740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS33_06760 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_06765 PF04127 DNA / pantothenate metabolism flavoprotein MIS33_06765 PF02441 Flavoprotein MIS33_06780 PF02601 Exonuclease VII, large subunit MIS33_06780 PF13742 OB-fold nucleic acid binding domain MIS33_06785 PF01501 Glycosyl transferase family 8 MIS33_06785 PF00535 Glycosyl transferase family 2 MIS33_06790 PF01168 Alanine racemase, N-terminal domain MIS33_06805 PF03109 ABC1 family MIS33_06810 PF00773 RNB domain MIS33_06810 PF00575 S1 RNA binding domain MIS33_06810 PF17876 Cold shock domain MIS33_06810 PF08461 Ribonuclease R winged-helix domain MIS33_06810 PF08206 Ribonuclease B OB domain MIS33_06820 PF01042 Endoribonuclease L-PSP MIS33_06825 PF01717 Cobalamin-independent synthase, Catalytic domain MIS33_06830 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_06835 PF00873 AcrB/AcrD/AcrF family MIS33_06840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS33_06845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS33_06845 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS33_06855 PF01323 DSBA-like thioredoxin domain MIS33_06860 PF01638 HxlR-like helix-turn-helix MIS33_06870 PF02965 Vitamin B12 dependent methionine synthase, activation domain MIS33_06870 PF00809 Pterin binding enzyme MIS33_06870 PF02607 B12 binding domain MIS33_06870 PF02310 B12 binding domain MIS33_06870 PF02574 Homocysteine S-methyltransferase MIS33_06875 PF00206 Lyase MIS33_06875 PF08328 Adenylosuccinate lyase C-terminal MIS33_06890 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_06900 PF02091 Glycyl-tRNA synthetase alpha subunit MIS33_06910 PF01678 Diaminopimelate epimerase MIS33_06920 PF12705 PD-(D/E)XK nuclease superfamily MIS33_06920 PF00580 UvrD/REP helicase N-terminal domain MIS33_06920 PF13361 UvrD-like helicase C-terminal domain MIS33_06925 PF01027 Inhibitor of apoptosis-promoting Bax1 MIS33_06930 PF00743 Flavin-binding monooxygenase-like MIS33_06935 PF01259 SAICAR synthetase MIS33_06940 PF00132 Bacterial transferase hexapeptide (six repeats) MIS33_06940 PF06426 Serine acetyltransferase, N-terminal MIS33_06950 PF12327 FtsZ family, C-terminal domain MIS33_06950 PF00091 Tubulin/FtsZ family, GTPase domain MIS33_06955 PF02491 SHS2 domain inserted in FTSA MIS33_06960 PF03799 Cell division protein FtsQ MIS33_06960 PF08478 POTRA domain, FtsQ-type MIS33_06965 PF07478 D-ala D-ala ligase C-terminus MIS33_06965 PF01820 D-ala D-ala ligase N-terminus MIS33_06970 PF01225 Mur ligase family, catalytic domain MIS33_06970 PF02875 Mur ligase family, glutamate ligase domain MIS33_06970 PF08245 Mur ligase middle domain MIS33_06975 PF00293 NUDIX domain MIS33_06980 PF00924 Mechanosensitive ion channel MIS33_06980 PF12794 Mechanosensitive ion channel inner membrane domain 1 MIS33_06980 PF12795 Mechanosensitive ion channel porin domain MIS33_06985 PF04073 Aminoacyl-tRNA editing domain MIS33_06985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS33_06985 PF03129 Anticodon binding domain MIS33_06995 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS33_07015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MIS33_07015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MIS33_07020 PF00303 Thymidylate synthase MIS33_07025 PF07690 Major Facilitator Superfamily MIS33_07030 PF00970 Oxidoreductase FAD-binding domain MIS33_07030 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS33_07030 PF00175 Oxidoreductase NAD-binding domain MIS33_07040 PF00710 Asparaginase, N-terminal MIS33_07040 PF17763 Glutaminase/Asparaginase C-terminal domain MIS33_07050 PF00583 Acetyltransferase (GNAT) family MIS33_07055 PF02254 TrkA-N domain MIS33_07055 PF00999 Sodium/hydrogen exchanger family MIS33_07060 PF00186 Dihydrofolate reductase MIS33_07065 PF04247 Invasion gene expression up-regulator, SirB MIS33_07075 PF00551 Formyl transferase MIS33_07080 PF01177 Asp/Glu/Hydantoin racemase MIS33_07085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MIS33_07090 PF00271 Helicase conserved C-terminal domain MIS33_07090 PF00270 DEAD/DEAH box helicase MIS33_07095 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MIS33_07100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MIS33_07100 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MIS33_07105 PF07670 Nucleoside recognition MIS33_07105 PF07662 Na+ dependent nucleoside transporter C-terminus MIS33_07105 PF01773 Na+ dependent nucleoside transporter N-terminus MIS33_07110 PF02885 Glycosyl transferase family, helical bundle domain MIS33_07110 PF00591 Glycosyl transferase family, a/b domain MIS33_07110 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MIS33_07115 PF01048 Phosphorylase superfamily MIS33_07120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_07120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS33_07125 PF00977 Histidine biosynthesis protein MIS33_07130 PF01551 Peptidase family M23 MIS33_07130 PF01476 LysM domain MIS33_07145 PF13520 Amino acid permease MIS33_07150 PF01694 Rhomboid family MIS33_07155 PF00156 Phosphoribosyl transferase domain MIS33_07160 PF13230 Glutamine amidotransferases class-II MIS33_07165 PF02390 Putative methyltransferase MIS33_07170 PF09397 Ftsk gamma domain MIS33_07170 PF17854 FtsK alpha domain MIS33_07170 PF01580 FtsK/SpoIIIE family MIS33_07185 PF00679 Elongation factor G C-terminus MIS33_07185 PF03144 Elongation factor Tu domain 2 MIS33_07185 PF00009 Elongation factor Tu GTP binding domain MIS33_07185 PF06421 GTP-binding protein LepA C-terminus MIS33_07210 PF03960 ArsC family MIS33_07215 PF00459 Inositol monophosphatase family MIS33_07220 PF00892 EamA-like transporter family MIS33_07225 PF05872 Bacterial protein of unknown function (DUF853) MIS33_07235 PF01523 Putative modulator of DNA gyrase MIS33_07240 PF04751 Protein of unknown function (DUF615) MIS33_07250 PF06418 CTP synthase N-terminus MIS33_07250 PF00117 Glutamine amidotransferase class-I MIS33_07255 PF00390 Malic enzyme, N-terminal domain MIS33_07255 PF01515 Phosphate acetyl/butaryl transferase MIS33_07255 PF03949 Malic enzyme, NAD binding domain MIS33_07265 PF00117 Glutamine amidotransferase class-I MIS33_07270 PF00977 Histidine biosynthesis protein MIS33_07280 PF01264 Chorismate synthase MIS33_07285 PF01985 CRS1 / YhbY (CRM) domain MIS33_07290 PF01250 Ribosomal protein S6 MIS33_07300 PF01084 Ribosomal protein S18 MIS33_07305 PF03948 Ribosomal protein L9, C-terminal domain MIS33_07305 PF01281 Ribosomal protein L9, N-terminal domain MIS33_07320 PF02470 MlaD protein MIS33_07330 PF01425 Amidase MIS33_07370 PF02686 Glu-tRNAGln amidotransferase C subunit MIS33_07385 PF04093 rod shape-determining protein MreD MIS33_07390 PF03717 Penicillin-binding Protein dimerisation domain MIS33_07390 PF00905 Penicillin binding protein transpeptidase domain MIS33_07395 PF01098 Cell cycle protein MIS33_07400 PF01914 MarC family integral membrane protein MIS33_07410 PF03658 RnfH family Ubiquitin MIS33_07415 PF01195 Peptidyl-tRNA hydrolase MIS33_07420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MIS33_07440 PF01416 tRNA pseudouridine synthase MIS33_07450 PF18073 Rubredoxin metal binding domain MIS33_07460 PF07690 Major Facilitator Superfamily MIS33_07470 PF01926 50S ribosome-binding GTPase MIS33_07470 PF16360 GTP-binding GTPase Middle Region MIS33_07470 PF13167 GTP-binding GTPase N-terminal MIS33_07480 PF03313 Serine dehydratase alpha chain MIS33_07480 PF03315 Serine dehydratase beta chain MIS33_07485 PF06470 SMC proteins Flexible Hinge Domain MIS33_07485 PF02463 RecF/RecN/SMC N terminal domain MIS33_07490 PF02447 GntP family permease MIS33_07545 PF04381 Putative exonuclease, RdgC MIS33_07555 PF00436 Single-strand binding protein family MIS33_07575 PF12684 PDDEXK-like domain of unknown function (DUF3799) MIS33_07575 PF06630 Enterobacterial exodeoxyribonuclease VIII MIS33_07615 PF01381 Helix-turn-helix MIS33_07615 PF00717 Peptidase S24-like MIS33_07640 PF08346 AntA/AntB antirepressor MIS33_07640 PF10548 P22AR C-terminal domain MIS33_07650 PF01695 IstB-like ATP binding protein MIS33_07710 PF17288 Terminase RNAseH like domain MIS33_07710 PF04466 Phage terminase large subunit MIS33_07860 PF03449 Transcription elongation factor, N-terminal MIS33_07860 PF01272 Transcription elongation factor, GreA/GreB, C-term MIS33_07870 PF00291 Pyridoxal-phosphate dependent enzyme MIS33_07880 PF15864 Protein glycosylation ligase MIS33_07880 PF04932 O-Antigen ligase MIS33_07880 PF11846 Virulence factor membrane-bound polymerase, C-terminal MIS33_07890 PF08525 Opacity-associated protein A N-terminal motif MIS33_07890 PF01551 Peptidase family M23 MIS33_07890 PF01476 LysM domain MIS33_07910 PF04851 Type III restriction enzyme, res subunit MIS33_07910 PF08774 VRR-NUC domain MIS33_07915 PF01555 DNA methylase MIS33_07915 PF18273 Type III R-M EcoP15I C-terminal domain MIS33_07940 PF00216 Bacterial DNA-binding protein MIS33_07950 PF03840 Preprotein translocase SecG subunit MIS33_07955 PF00121 Triosephosphate isomerase MIS33_07960 PF07743 HSCB C-terminal oligomerisation domain MIS33_07960 PF00226 DnaJ domain MIS33_07965 PF05525 Branched-chain amino acid transport protein MIS33_07970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MIS33_07970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MIS33_07975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIS33_07990 PF00326 Prolyl oligopeptidase family MIS33_07990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MIS33_08000 PF05496 Holliday junction DNA helicase RuvB P-loop domain MIS33_08000 PF05491 RuvB C-terminal winged helix domain MIS33_08000 PF17864 RuvB AAA lid domain MIS33_08010 PF04546 Sigma-70, non-essential region MIS33_08010 PF00140 Sigma-70 factor, region 1.2 MIS33_08010 PF04542 Sigma-70 region 2 MIS33_08010 PF04539 Sigma-70 region 3 MIS33_08010 PF04545 Sigma-70, region 4 MIS33_08010 PF03979 Sigma-70 factor, region 1.1 MIS33_08015 PF01370 NAD dependent epimerase/dehydratase family MIS33_08020 PF10672 S-adenosylmethionine-dependent methyltransferase MIS33_08025 PF01965 DJ-1/PfpI family MIS33_08025 PF12833 Helix-turn-helix domain MIS33_08030 PF01966 HD domain MIS33_08030 PF01743 Poly A polymerase head domain MIS33_08030 PF12627 Probable RNA and SrmB- binding site of polymerase A MIS33_08035 PF01717 Cobalamin-independent synthase, Catalytic domain MIS33_08045 PF05191 Adenylate kinase, active site lid MIS33_08055 PF00474 Sodium:solute symporter family MIS33_08060 PF00270 DEAD/DEAH box helicase MIS33_08060 PF00271 Helicase conserved C-terminal domain MIS33_08060 PF03461 TRCF domain MIS33_08060 PF17757 UvrB interaction domain MIS33_08060 PF02559 CarD-like/TRCF domain MIS33_08075 PF00881 Nitroreductase family MIS33_08085 PF12706 Beta-lactamase superfamily domain MIS33_08095 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_08095 PF00107 Zinc-binding dehydrogenase MIS33_08100 PF01555 DNA methylase MIS33_08110 PF00271 Helicase conserved C-terminal domain MIS33_08110 PF00176 SNF2 family N-terminal domain MIS33_08115 PF00756 Putative esterase MIS33_08135 PF13635 Domain of unknown function (DUF4143) MIS33_08135 PF13173 AAA domain MIS33_08140 PF00107 Zinc-binding dehydrogenase MIS33_08140 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_08145 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MIS33_08150 PF01850 PIN domain MIS33_08155 PF02525 Flavodoxin-like fold MIS33_08170 PF03466 LysR substrate binding domain MIS33_08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_08175 PF03060 Nitronate monooxygenase MIS33_08205 PF00107 Zinc-binding dehydrogenase MIS33_08205 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_08210 PF03466 LysR substrate binding domain MIS33_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_08220 PF00881 Nitroreductase family MIS33_08245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS33_08250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS33_08255 PF00296 Luciferase-like monooxygenase MIS33_08270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_08270 PF03466 LysR substrate binding domain MIS33_08285 PF01638 HxlR-like helix-turn-helix MIS33_08290 PF13673 Acetyltransferase (GNAT) domain MIS33_08290 PF13302 Acetyltransferase (GNAT) domain MIS33_08290 PF03352 Methyladenine glycosylase MIS33_08290 PF00958 GMP synthase C terminal domain MIS33_08290 PF00117 Glutamine amidotransferase class-I MIS33_08310 PF00162 Phosphoglycerate kinase MIS33_08325 PF02615 Malate/L-lactate dehydrogenase MIS33_08400 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB MIS33_08405 PF01381 Helix-turn-helix MIS33_08430 PF06791 Prophage tail length tape measure protein MIS33_08495 PF00574 Clp protease MIS33_08540 PF00436 Single-strand binding protein family MIS33_08575 PF13356 Arm DNA-binding domain MIS33_08575 PF00589 Phage integrase family MIS33_08585 PF00583 Acetyltransferase (GNAT) family MIS33_08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_08600 PF02272 DHHA1 domain MIS33_08600 PF01411 tRNA synthetases class II (A) MIS33_08600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIS33_08625 PF00293 NUDIX domain MIS33_08630 PF16123 Hydroxyacylglutathione hydrolase C-terminus MIS33_08630 PF00753 Metallo-beta-lactamase superfamily MIS33_08640 PF01219 Prokaryotic diacylglycerol kinase MIS33_08650 PF00535 Glycosyl transferase family 2 MIS33_08650 PF01501 Glycosyl transferase family 8 MIS33_08655 PF01040 UbiA prenyltransferase family MIS33_08675 PF02397 Bacterial sugar transferase MIS33_08680 PF03883 Peroxide stress protein YaaA MIS33_08685 PF00793 DAHP synthetase I family MIS33_08690 PF00571 CBS domain MIS33_08690 PF01380 SIS domain MIS33_08715 PF00005 ABC transporter MIS33_08715 PF12399 Branched-chain amino acid ATP-binding cassette transporter MIS33_08720 PF00309 Sigma-54 factor, Activator interacting domain (AID) MIS33_08720 PF04963 Sigma-54 factor, core binding domain MIS33_08720 PF04552 Sigma-54, DNA binding domain MIS33_08725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MIS33_08735 PF02527 rRNA small subunit methyltransferase G MIS33_08740 PF13614 AAA domain MIS33_08745 PF00210 Ferritin-like domain MIS33_08750 PF00210 Ferritin-like domain MIS33_08755 PF00701 Dihydrodipicolinate synthetase family MIS33_08760 PF06804 NlpB/DapX lipoprotein MIS33_08770 PF00953 Glycosyl transferase family 4 MIS33_08775 PF01225 Mur ligase family, catalytic domain MIS33_08775 PF02875 Mur ligase family, glutamate ligase domain MIS33_08775 PF08245 Mur ligase middle domain MIS33_08790 PF04198 Putative sugar-binding domain MIS33_08800 PF00294 pfkB family carbohydrate kinase MIS33_08815 PF01791 DeoC/LacD family aldolase MIS33_08820 PF00884 Sulfatase MIS33_08835 PF02463 RecF/RecN/SMC N terminal domain MIS33_08840 PF01225 Mur ligase family, catalytic domain MIS33_08840 PF02875 Mur ligase family, glutamate ligase domain MIS33_08840 PF08245 Mur ligase middle domain MIS33_08855 PF03717 Penicillin-binding Protein dimerisation domain MIS33_08855 PF00905 Penicillin binding protein transpeptidase domain MIS33_08865 PF01795 MraW methylase family MIS33_08870 PF02381 MraZ protein, putative antitoxin-like MIS33_08885 PF00230 Major intrinsic protein MIS33_08890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS33_08895 PF07690 Major Facilitator Superfamily MIS33_08900 PF00436 Single-strand binding protein family MIS33_08915 PF01435 Peptidase family M48 MIS33_08925 PF03462 PCRF domain MIS33_08925 PF00472 RF-1 domain MIS33_08940 PF01850 PIN domain MIS33_08950 PF18073 Rubredoxin metal binding domain MIS33_08960 PF01063 Amino-transferase class IV MIS33_08970 PF01609 Transposase DDE domain MIS33_08985 PF01029 NusB family MIS33_08985 PF01189 16S rRNA methyltransferase RsmB/F MIS33_08990 PF06969 HemN C-terminal domain MIS33_08990 PF04055 Radical SAM superfamily MIS33_08995 PF00027 Cyclic nucleotide-binding domain MIS33_08995 PF13545 Crp-like helix-turn-helix domain MIS33_09000 PF00072 Response regulator receiver domain MIS33_09000 PF00486 Transcriptional regulatory protein, C terminal MIS33_09005 PF00672 HAMP domain MIS33_09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_09005 PF00512 His Kinase A (phospho-acceptor) domain MIS33_09005 PF16750 Sensor domain of 2-component histidine kinase MIS33_09010 PF16363 GDP-mannose 4,6 dehydratase MIS33_09015 PF07690 Major Facilitator Superfamily MIS33_09025 PF03193 RsgA GTPase MIS33_09035 PF13439 Glycosyltransferase Family 4 MIS33_09035 PF00534 Glycosyl transferases group 1 MIS33_09045 PF03222 Tryptophan/tyrosine permease family MIS33_09050 PF01467 Cytidylyltransferase-like MIS33_09065 PF13302 Acetyltransferase (GNAT) domain MIS33_09070 PF00294 pfkB family carbohydrate kinase MIS33_09075 PF00132 Bacterial transferase hexapeptide (six repeats) MIS33_09090 PF01926 50S ribosome-binding GTPase MIS33_09090 PF06071 Protein of unknown function (DUF933) MIS33_09100 PF03807 NADP oxidoreductase coenzyme F420-dependent MIS33_09100 PF14748 Pyrroline-5-carboxylate reductase dimerisation MIS33_09105 PF01979 Amidohydrolase family MIS33_09110 PF00817 impB/mucB/samB family MIS33_09110 PF11799 impB/mucB/samB family C-terminal domain MIS33_09110 PF11798 IMS family HHH motif MIS33_09115 PF04384 Iron-sulphur cluster assembly MIS33_09120 PF01256 Carbohydrate kinase MIS33_09125 PF01553 Acyltransferase MIS33_09135 PF01266 FAD dependent oxidoreductase MIS33_09135 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MIS33_09150 PF02603 HPr Serine kinase N terminus MIS33_09150 PF07475 HPr Serine kinase C-terminal domain MIS33_09155 PF03668 P-loop ATPase protein family MIS33_09160 PF08335 GlnD PII-uridylyltransferase MIS33_09160 PF01966 HD domain MIS33_09165 PF00529 HlyD membrane-fusion protein of T1SS MIS33_09165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS33_09175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MIS33_09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS33_09180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIS33_09185 PF00462 Glutaredoxin MIS33_09185 PF08534 Redoxin MIS33_09200 PF00313 'Cold-shock' DNA-binding domain MIS33_09205 PF02617 ATP-dependent Clp protease adaptor protein ClpS MIS33_09210 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_09210 PF07724 AAA domain (Cdc48 subfamily) MIS33_09210 PF17871 AAA lid domain MIS33_09210 PF02861 Clp amino terminal domain, pathogenicity island component MIS33_09210 PF10431 C-terminal, D2-small domain, of ClpB protein MIS33_09215 PF01565 FAD binding domain MIS33_09215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MIS33_09220 PF01300 Telomere recombination MIS33_09225 PF02464 Competence-damaged protein MIS33_09230 PF07072 Cell division protein MIS33_09235 PF01121 Dephospho-CoA kinase MIS33_09240 PF01478 Type IV leader peptidase family MIS33_09240 PF06750 Bacterial Peptidase A24 N-terminal domain MIS33_09245 PF00482 Type II secretion system (T2SS), protein F MIS33_09250 PF00437 Type II/IV secretion system protein MIS33_09250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MIS33_09260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MIS33_09265 PF04305 Protein of unknown function (DUF455) MIS33_09270 PF03548 Outer membrane lipoprotein carrier protein LolA MIS33_09275 PF03702 Anhydro-N-acetylmuramic acid kinase MIS33_09280 PF02033 Ribosome-binding factor A MIS33_09285 PF00085 Thioredoxin MIS33_09290 PF12170 DNA polymerase III tau subunit V interacting with alpha MIS33_09290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MIS33_09290 PF12169 DNA polymerase III subunits gamma and tau domain III MIS33_09295 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) MIS33_09315 PF01435 Peptidase family M48 MIS33_09320 PF11412 Disulphide bond corrector protein DsbC MIS33_09320 PF02683 Cytochrome C biogenesis protein transmembrane region MIS33_09320 PF00085 Thioredoxin MIS33_09325 PF00005 ABC transporter MIS33_09330 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_09335 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_09340 PF13089 Polyphosphate kinase N-terminal domain MIS33_09340 PF17941 Polyphosphate kinase C-terminal domain 1 MIS33_09340 PF02503 Polyphosphate kinase middle domain MIS33_09340 PF13090 Polyphosphate kinase C-terminal domain 2 MIS33_09345 PF00881 Nitroreductase family MIS33_09350 PF13419 Haloacid dehalogenase-like hydrolase MIS33_09360 PF01513 ATP-NAD kinase MIS33_09375 PF13409 Glutathione S-transferase, N-terminal domain MIS33_09395 PF00204 DNA gyrase B MIS33_09395 PF00986 DNA gyrase B subunit, carboxyl terminus MIS33_09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_09395 PF01751 Toprim domain MIS33_09395 PF18053 DNA gyrase B subunit insert domain MIS33_09410 PF00005 ABC transporter MIS33_09415 PF01790 Prolipoprotein diacylglyceryl transferase MIS33_09420 PF04055 Radical SAM superfamily MIS33_09420 PF00919 Uncharacterized protein family UPF0004 MIS33_09420 PF01938 TRAM domain MIS33_09430 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS33_09460 PF05167 Uncharacterised ACR (DUF711) MIS33_09470 PF09330 D-lactate dehydrogenase, membrane binding MIS33_09470 PF01565 FAD binding domain MIS33_09480 PF13091 PLD-like domain MIS33_09490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MIS33_09500 PF13840 ACT domain MIS33_09500 PF01842 ACT domain MIS33_09500 PF00696 Amino acid kinase family MIS33_09505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MIS33_09505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MIS33_09510 PF03466 LysR substrate binding domain MIS33_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_09515 PF03631 Virulence factor BrkB MIS33_09520 PF01467 Cytidylyltransferase-like MIS33_09525 PF11067 Protein of unknown function (DUF2868) MIS33_09545 PF01491 Frataxin-like domain MIS33_09560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MIS33_09560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MIS33_09565 PF00437 Type II/IV secretion system protein MIS33_09570 PF00437 Type II/IV secretion system protein MIS33_09575 PF12111 Polyribonucleotide phosphorylase C terminal MIS33_09575 PF10150 Ribonuclease E/G family MIS33_09575 PF00575 S1 RNA binding domain MIS33_09580 PF00849 RNA pseudouridylate synthase MIS33_09580 PF01479 S4 domain MIS33_09615 PF13180 PDZ domain MIS33_09620 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_09625 PF04359 Protein of unknown function (DUF493) MIS33_09630 PF03099 Biotin/lipoate A/B protein ligase family MIS33_09635 PF00106 short chain dehydrogenase MIS33_09640 PF17375 Family of unknown function (DUF5397) MIS33_09650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MIS33_09650 PF04055 Radical SAM superfamily MIS33_09655 PF12564 Type III restriction/modification enzyme methylation subunit MIS33_09660 PF01555 DNA methylase MIS33_09670 PF03806 AbgT putative transporter family MIS33_09675 PF00814 Glycoprotease family MIS33_09680 PF01207 Dihydrouridine synthase (Dus) MIS33_09685 PF03466 LysR substrate binding domain MIS33_09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_09690 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_09695 PF13416 Bacterial extracellular solute-binding protein MIS33_09705 PF05209 Septum formation inhibitor MinC, N-terminal domain MIS33_09705 PF03775 Septum formation inhibitor MinC, C-terminal domain MIS33_09710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MIS33_09715 PF03776 Septum formation topological specificity factor MinE MIS33_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_09720 PF03466 LysR substrate binding domain MIS33_09730 PF00308 Bacterial dnaA protein MIS33_09735 PF02682 Carboxyltransferase domain, subdomain C and D MIS33_09740 PF02626 Carboxyltransferase domain, subdomain A and B MIS33_09745 PF03746 LamB/YcsF family MIS33_09765 PF01566 Natural resistance-associated macrophage protein MIS33_09770 PF05746 DALR anticodon binding domain MIS33_09770 PF02092 Glycyl-tRNA synthetase beta subunit MIS33_09795 PF07922 Glycosyltransferase family 52 MIS33_09800 PF01943 Polysaccharide biosynthesis protein MIS33_09810 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MIS33_09810 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS33_09815 PF08207 Elongation factor P (EF-P) KOW-like domain MIS33_09815 PF09285 Elongation factor P, C-terminal MIS33_09815 PF01132 Elongation factor P (EF-P) OB domain MIS33_09885 PF13726 Na+-H+ antiporter family MIS33_09885 PF03553 Na+/H+ antiporter family MIS33_09900 PF03458 UPF0126 domain MIS33_09905 PF00005 ABC transporter MIS33_09905 PF12704 MacB-like periplasmic core domain MIS33_09905 PF02687 FtsX-like permease family MIS33_09910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS33_09935 PF00290 Tryptophan synthase alpha chain MIS33_09940 PF00375 Sodium:dicarboxylate symporter family MIS33_09950 PF04102 SlyX MIS33_09955 PF00293 NUDIX domain MIS33_09975 PF00009 Elongation factor Tu GTP binding domain MIS33_09975 PF11987 Translation-initiation factor 2 MIS33_09975 PF04760 Translation initiation factor IF-2, N-terminal region MIS33_09980 PF08529 NusA N-terminal domain MIS33_09980 PF13184 NusA-like KH domain MIS33_09985 PF02576 RimP N-terminal domain MIS33_09985 PF17384 RimP C-terminal SH3 domain MIS33_09995 PF00085 Thioredoxin MIS33_10000 PF13395 HNH endonuclease MIS33_10000 PF18541 RuvC endonuclease subdomain 3 MIS33_10005 PF01867 CRISPR associated protein Cas1 MIS33_10010 PF09827 CRISPR associated protein Cas2 MIS33_10015 PF17760 UvrA interaction domain MIS33_10015 PF17755 UvrA DNA-binding domain MIS33_10035 PF00472 RF-1 domain MIS33_10035 PF03462 PCRF domain MIS33_10040 PF04263 Thiamin pyrophosphokinase, catalytic domain MIS33_10040 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain MIS33_10050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MIS33_10060 PF01475 Ferric uptake regulator family MIS33_10065 PF04355 SmpA / OmlA family MIS33_10070 PF05173 Dihydrodipicolinate reductase, C-terminus MIS33_10070 PF01113 Dihydrodipicolinate reductase, N-terminus MIS33_10075 PF01066 CDP-alcohol phosphatidyltransferase MIS33_10080 PF01268 Formate--tetrahydrofolate ligase MIS33_10090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MIS33_10100 PF07732 Multicopper oxidase MIS33_10105 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIS33_10120 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_10120 PF07724 AAA domain (Cdc48 subfamily) MIS33_10120 PF17871 AAA lid domain MIS33_10120 PF10431 C-terminal, D2-small domain, of ClpB protein MIS33_10125 PF04717 Type VI secretion system, phage-baseplate injector MIS33_10150 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MIS33_10175 PF02796 Helix-turn-helix domain of resolvase MIS33_10175 PF00239 Resolvase, N terminal domain MIS33_10200 PF00691 OmpA family MIS33_10200 PF05736 OprF membrane domain MIS33_10235 PF04717 Type VI secretion system, phage-baseplate injector MIS33_10290 PF00403 Heavy-metal-associated domain MIS33_10295 PF01613 Flavin reductase like domain MIS33_10300 PF08946 Osmosensory transporter coiled coil MIS33_10300 PF00083 Sugar (and other) transporter MIS33_10310 PF02633 Creatinine amidohydrolase MIS33_10315 PF00892 EamA-like transporter family MIS33_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS33_10325 PF01751 Toprim domain MIS33_10325 PF00986 DNA gyrase B subunit, carboxyl terminus MIS33_10325 PF00204 DNA gyrase B MIS33_10345 PF01554 MatE MIS33_10355 PF06508 Queuosine biosynthesis protein QueC MIS33_10360 PF07690 Major Facilitator Superfamily MIS33_10365 PF00860 Permease family MIS33_10370 PF02566 OsmC-like protein MIS33_10380 PF01145 SPFH domain / Band 7 family MIS33_10380 PF16200 C-terminal region of band_7 MIS33_10385 PF00043 Glutathione S-transferase, C-terminal domain MIS33_10385 PF02798 Glutathione S-transferase, N-terminal domain MIS33_10390 PF04386 Stringent starvation protein B MIS33_10400 PF05164 Cell division protein ZapA MIS33_10410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MIS33_10410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MIS33_10425 PF02618 YceG-like family MIS33_10430 PF01197 Ribosomal protein L31 MIS33_10435 PF00444 Ribosomal protein L36 MIS33_10445 PF04261 Dyp-type peroxidase family MIS33_10450 PF01553 Acyltransferase MIS33_10465 PF04002 RadC-like JAB domain MIS33_10470 PF00005 ABC transporter MIS33_10490 PF01032 FecCD transport family MIS33_10505 PF00490 Delta-aminolevulinic acid dehydratase MIS33_10530 PF00883 Cytosol aminopeptidase family, catalytic domain MIS33_10540 PF17827 PrmC N-terminal domain MIS33_10540 PF05175 Methyltransferase small domain MIS33_10555 PF02348 Cytidylyltransferase MIS33_10560 PF03966 Trm112p-like protein MIS33_10575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MIS33_10580 PF00483 Nucleotidyl transferase MIS33_10590 PF00899 ThiF family MIS33_10595 PF00582 Universal stress protein family MIS33_10600 PF00753 Metallo-beta-lactamase superfamily MIS33_10605 PF02153 Prephenate dehydrogenase MIS33_10605 PF01842 ACT domain MIS33_10615 PF01047 MarR family MIS33_10620 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_10625 PF06574 FAD synthetase MIS33_10625 PF01687 Riboflavin kinase MIS33_10630 PF00005 ABC transporter MIS33_10635 PF01047 MarR family MIS33_10640 PF00210 Ferritin-like domain MIS33_10645 PF02566 OsmC-like protein MIS33_10655 PF01032 FecCD transport family MIS33_10665 PF13173 AAA domain MIS33_10665 PF13635 Domain of unknown function (DUF4143) MIS33_10675 PF01032 FecCD transport family MIS33_10685 PF01497 Periplasmic binding protein MIS33_10700 PF00154 recA bacterial DNA recombination protein MIS33_10705 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_10705 PF00107 Zinc-binding dehydrogenase MIS33_10710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MIS33_10710 PF01872 RibD C-terminal domain MIS33_10715 PF00425 chorismate binding enzyme MIS33_10715 PF04715 Anthranilate synthase component I, N terminal region MIS33_10725 PF02545 Maf-like protein MIS33_10740 PF02616 Segregation and condensation protein ScpA MIS33_10750 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MIS33_10750 PF14602 Hexapeptide repeat of succinyl-transferase MIS33_10760 PF13406 Transglycosylase SLT domain MIS33_10765 PF02810 SEC-C motif MIS33_10770 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIS33_10770 PF02774 Semialdehyde dehydrogenase, dimerisation domain MIS33_10780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIS33_10790 PF08264 Anticodon-binding domain of tRNA MIS33_10790 PF00133 tRNA synthetases class I (I, L, M and V) MIS33_10790 PF13603 Leucyl-tRNA synthetase, Domain 2 MIS33_10790 PF09334 tRNA synthetases class I (M) MIS33_10880 PF01322 Cytochrome C' MIS33_10885 PF00106 short chain dehydrogenase MIS33_10895 PF01578 Cytochrome C assembly protein MIS33_10905 PF00005 ABC transporter MIS33_10905 PF09383 NIL domain MIS33_10910 PF00528 Binding-protein-dependent transport system inner membrane component MIS33_10915 PF03180 NLPA lipoprotein MIS33_10920 PF02678 Pirin MIS33_10920 PF05726 Pirin C-terminal cupin domain MIS33_10925 PF00795 Carbon-nitrogen hydrolase MIS33_10930 PF02540 NAD synthase MIS33_10940 PF00679 Elongation factor G C-terminus MIS33_10940 PF14492 Elongation Factor G, domain II MIS33_10940 PF03764 Elongation factor G, domain IV MIS33_10940 PF00009 Elongation factor Tu GTP binding domain MIS33_10940 PF03144 Elongation factor Tu domain 2 MIS33_10945 PF00177 Ribosomal protein S7p/S5e MIS33_10950 PF00164 Ribosomal protein S12/S23 MIS33_10960 PF00580 UvrD/REP helicase N-terminal domain MIS33_10960 PF13361 UvrD-like helicase C-terminal domain MIS33_10965 PF04324 BFD-like [2Fe-2S] binding domain MIS33_10975 PF01255 Putative undecaprenyl diphosphate synthase MIS33_10985 PF09335 SNARE associated Golgi protein MIS33_10990 PF00675 Insulinase (Peptidase family M16) MIS33_10990 PF05193 Peptidase M16 inactive domain MIS33_10995 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_11000 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_11005 PF00199 Catalase MIS33_11005 PF06628 Catalase-related immune-responsive MIS33_11010 PF01066 CDP-alcohol phosphatidyltransferase MIS33_11015 PF01209 ubiE/COQ5 methyltransferase family MIS33_11045 PF06965 Na+/H+ antiporter 1 MIS33_11045 PF01343 Peptidase family S49 MIS33_11055 PF01068 ATP dependent DNA ligase domain MIS33_11055 PF14743 DNA ligase OB-like domain MIS33_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS33_11060 PF03466 LysR substrate binding domain MIS33_11065 PF01255 Putative undecaprenyl diphosphate synthase MIS33_11070 PF03023 Lipid II flippase MurJ MIS33_11075 PF04361 Protein of unknown function (DUF494) MIS33_11085 PF01131 DNA topoisomerase MIS33_11085 PF13368 Topoisomerase C-terminal repeat MIS33_11085 PF01751 Toprim domain MIS33_11105 PF05992 SbmA/BacA-like family MIS33_11110 PF04715 Anthranilate synthase component I, N terminal region MIS33_11110 PF00425 chorismate binding enzyme MIS33_11150 PF00574 Clp protease MIS33_11155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS33_11155 PF05698 Bacterial trigger factor protein (TF) C-terminus MIS33_11155 PF05697 Bacterial trigger factor protein (TF) MIS33_11160 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MIS33_11165 PF18027 Cytosolic carboxypeptidase N-terminal domain MIS33_11165 PF00246 Zinc carboxypeptidase MIS33_11170 PF13533 Biotin-lipoyl like MIS33_11175 PF08240 Alcohol dehydrogenase GroES-like domain MIS33_11175 PF00107 Zinc-binding dehydrogenase MIS33_11185 PF02590 Predicted SPOUT methyltransferase MIS33_11190 PF00691 OmpA family MIS33_11195 PF00462 Glutaredoxin MIS33_11200 PF02556 Preprotein translocase subunit SecB MIS33_11205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIS33_11210 PF00929 Exonuclease MIS33_11235 PF00004 ATPase family associated with various cellular activities (AAA) MIS33_11235 PF07724 AAA domain (Cdc48 subfamily) MIS33_11235 PF17871 AAA lid domain MIS33_11235 PF02861 Clp amino terminal domain, pathogenicity island component MIS33_11235 PF10431 C-terminal, D2-small domain, of ClpB protein MIS33_11250 PF01765 Ribosome recycling factor MIS33_11255 PF00155 Aminotransferase class I and II MIS33_11275 PF02913 FAD linked oxidases, C-terminal domain MIS33_11275 PF01565 FAD binding domain MIS33_11295 PF00929 Exonuclease MIS33_11300 PF01467 Cytidylyltransferase-like MIS33_11305 PF00484 Carbonic anhydrase MIS33_11310 PF01297 Zinc-uptake complex component A periplasmic MIS33_11315 PF00005 ABC transporter MIS33_11330 PF10531 SLBB domain MIS33_11335 PF00380 Ribosomal protein S9/S16 MIS33_11340 PF00572 Ribosomal protein L13 MIS33_11345 PF00860 Permease family MIS33_11350 PF02222 ATP-grasp domain MIS33_11350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MIS33_11385 PF05524 PEP-utilising enzyme, N-terminal MIS33_11385 PF00391 PEP-utilising enzyme, mobile domain MIS33_11385 PF02896 PEP-utilising enzyme, TIM barrel domain MIS33_11390 PF00381 PTS HPr component phosphorylation site MIS33_11395 PF07690 Major Facilitator Superfamily MIS33_11415 PF09190 DALR domain MIS33_11415 PF01406 tRNA synthetases class I (C) catalytic domain MIS33_11420 PF00958 GMP synthase C terminal domain MIS33_11420 PF00117 Glutamine amidotransferase class-I MIS33_11420 PF02540 NAD synthase MIS33_11425 PF01235 Sodium:alanine symporter family MIS33_11430 PF04362 Bacterial Fe(2+) trafficking MIS33_11435 PF00550 Phosphopantetheine attachment site MIS33_11440 PF00109 Beta-ketoacyl synthase, N-terminal domain MIS33_11440 PF02801 Beta-ketoacyl synthase, C-terminal domain MIS33_11445 PF00224 Pyruvate kinase, barrel domain MIS33_11445 PF02887 Pyruvate kinase, alpha/beta domain MIS33_11455 PF00005 ABC transporter MIS33_11455 PF08402 TOBE domain MIS33_11460 PF00448 SRP54-type protein, GTPase domain MIS33_11460 PF02881 SRP54-type protein, helical bundle domain MIS33_11470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIS33_11475 PF00782 Dual specificity phosphatase, catalytic domain MIS33_11480 PF00730 HhH-GPD superfamily base excision DNA repair protein MIS33_11480 PF10576 Iron-sulfur binding domain of endonuclease III MIS33_11480 PF00633 Helix-hairpin-helix motif MIS33_11485 PF01165 Ribosomal protein S21 MIS33_11490 PF09424 Yqey-like protein MIS33_11495 PF00012 Hsp70 protein MIS33_11505 PF08245 Mur ligase middle domain MIS33_11505 PF01225 Mur ligase family, catalytic domain MIS33_11505 PF02875 Mur ligase family, glutamate ligase domain MIS33_11510 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS33_11520 PF02592 Putative vitamin uptake transporter MIS33_11525 PF14489 QueF-like protein MIS33_11530 PF01018 GTP1/OBG MIS33_11530 PF01926 50S ribosome-binding GTPase MIS33_11540 PF04608 Phosphatidylglycerophosphatase A MIS33_11545 PF05958 tRNA (Uracil-5-)-methyltransferase MIS33_11560 PF03169 OPT oligopeptide transporter protein MIS33_11565 PF06940 Domain of unknown function (DUF1287) MIS33_11600 PF01212 Beta-eliminating lyase MIS33_11615 PF09186 Domain of unknown function (DUF1949) MIS33_11615 PF01205 Uncharacterized protein family UPF0029 MIS33_11645 PF02096 60Kd inner membrane protein MIS33_11645 PF14849 YidC periplasmic domain MIS33_11650 PF01809 Putative membrane protein insertion efficiency factor MIS33_11655 PF00825 Ribonuclease P MIS33_11660 PF00468 Ribosomal protein L34