locus-tag class description MIS46_00005 PF00308 Bacterial dnaA protein MIS46_00005 PF08299 Bacterial dnaA protein helix-turn-helix MIS46_00005 PF11638 DnaA N-terminal domain MIS46_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MIS46_00010 PF02767 DNA polymerase III beta subunit, central domain MIS46_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MIS46_00030 PF02401 LytB protein MIS46_00040 PF01252 Signal peptidase (SPase) II MIS46_00045 PF01197 Ribosomal protein L31 MIS46_00055 PF01743 Poly A polymerase head domain MIS46_00055 PF12626 Polymerase A arginine-rich C-terminus MIS46_00055 PF12627 Probable RNA and SrmB- binding site of polymerase A MIS46_00065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_00070 PF02666 Phosphatidylserine decarboxylase MIS46_00080 PF01925 Sulfite exporter TauE/SafE MIS46_00090 PF05159 Capsule polysaccharide biosynthesis protein MIS46_00095 PF05159 Capsule polysaccharide biosynthesis protein MIS46_00105 PF13391 HNH endonuclease MIS46_00110 PF00857 Isochorismatase family MIS46_00115 PF00892 EamA-like transporter family MIS46_00130 PF01134 Glucose inhibited division protein A MIS46_00130 PF13932 GidA associated domain MIS46_00140 PF01226 Formate/nitrite transporter MIS46_00150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIS46_00150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIS46_00155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_00165 PF01196 Ribosomal protein L17 MIS46_00170 PF01000 RNA polymerase Rpb3/RpoA insert domain MIS46_00170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MIS46_00170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MIS46_00175 PF00163 Ribosomal protein S4/S9 N-terminal domain MIS46_00175 PF01479 S4 domain MIS46_00180 PF00411 Ribosomal protein S11 MIS46_00185 PF00416 Ribosomal protein S13/S18 MIS46_00190 PF00444 Ribosomal protein L36 MIS46_00195 PF01176 Translation initiation factor 1A / IF-1 MIS46_00200 PF00344 SecY translocase MIS46_00205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MIS46_00210 PF00327 Ribosomal protein L30p/L7e MIS46_00215 PF03719 Ribosomal protein S5, C-terminal domain MIS46_00215 PF00333 Ribosomal protein S5, N-terminal domain MIS46_00220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MIS46_00225 PF00347 Ribosomal protein L6 MIS46_00230 PF00410 Ribosomal protein S8 MIS46_00235 PF00253 Ribosomal protein S14p/S29e MIS46_00240 PF00281 Ribosomal protein L5 MIS46_00240 PF00673 ribosomal L5P family C-terminus MIS46_00245 PF00467 KOW motif MIS46_00245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MIS46_00250 PF00238 Ribosomal protein L14p/L23e MIS46_00255 PF00842 Alanine racemase, C-terminal domain MIS46_00255 PF01168 Alanine racemase, N-terminal domain MIS46_00260 PF07687 Peptidase dimerisation domain MIS46_00260 PF01546 Peptidase family M20/M25/M40 MIS46_00270 PF01243 Pyridoxamine 5'-phosphate oxidase MIS46_00270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MIS46_00275 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MIS46_00275 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MIS46_00275 PF01488 Shikimate / quinate 5-dehydrogenase MIS46_00280 PF00366 Ribosomal protein S17 MIS46_00285 PF00831 Ribosomal L29 protein MIS46_00290 PF00252 Ribosomal protein L16p/L10e MIS46_00295 PF07650 KH domain MIS46_00295 PF00189 Ribosomal protein S3, C-terminal domain MIS46_00300 PF00237 Ribosomal protein L22p/L17e MIS46_00305 PF00203 Ribosomal protein S19 MIS46_00310 PF00181 Ribosomal Proteins L2, RNA binding domain MIS46_00310 PF03947 Ribosomal Proteins L2, C-terminal domain MIS46_00315 PF00276 Ribosomal protein L23 MIS46_00320 PF00573 Ribosomal protein L4/L1 family MIS46_00325 PF00297 Ribosomal protein L3 MIS46_00345 PF01494 FAD binding domain MIS46_00350 PF01810 LysE type translocator MIS46_00365 PF03884 DNA gyrase inhibitor YacG MIS46_00370 PF01351 Ribonuclease HII MIS46_00380 PF01541 GIY-YIG catalytic domain MIS46_00380 PF02151 UvrB/uvrC motif MIS46_00380 PF08459 UvrC Helix-hairpin-helix N-terminal MIS46_00385 PF01351 Ribonuclease HII MIS46_00390 PF03884 DNA gyrase inhibitor YacG MIS46_00395 PF00939 Sodium:sulfate symporter transmembrane region MIS46_00400 PF02684 Lipid-A-disaccharide synthetase MIS46_00405 PF04998 RNA polymerase Rpb1, domain 5 MIS46_00405 PF05000 RNA polymerase Rpb1, domain 4 MIS46_00405 PF00623 RNA polymerase Rpb1, domain 2 MIS46_00405 PF04997 RNA polymerase Rpb1, domain 1 MIS46_00405 PF04983 RNA polymerase Rpb1, domain 3 MIS46_00415 PF04563 RNA polymerase beta subunit MIS46_00415 PF04561 RNA polymerase Rpb2, domain 2 MIS46_00415 PF04565 RNA polymerase Rpb2, domain 3 MIS46_00415 PF10385 RNA polymerase beta subunit external 1 domain MIS46_00415 PF00562 RNA polymerase Rpb2, domain 6 MIS46_00415 PF04560 RNA polymerase Rpb2, domain 7 MIS46_00420 PF00542 Ribosomal protein L7/L12 C-terminal domain MIS46_00420 PF16320 Ribosomal protein L7/L12 dimerisation domain MIS46_00425 PF00466 Ribosomal protein L10 MIS46_00430 PF00687 Ribosomal protein L1p/L10e family MIS46_00435 PF00298 Ribosomal protein L11, RNA binding domain MIS46_00435 PF03946 Ribosomal protein L11, N-terminal domain MIS46_00440 PF00467 KOW motif MIS46_00440 PF02357 Transcription termination factor nusG MIS46_00455 PF00009 Elongation factor Tu GTP binding domain MIS46_00455 PF03144 Elongation factor Tu domain 2 MIS46_00455 PF03143 Elongation factor Tu C-terminal domain MIS46_00475 PF00037 4Fe-4S binding domain MIS46_00480 PF02926 THUMP domain MIS46_00480 PF10672 S-adenosylmethionine-dependent methyltransferase MIS46_00480 PF01170 Putative RNA methylase family UPF0020 MIS46_00485 PF00773 RNB domain MIS46_00490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MIS46_00490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MIS46_00520 PF00478 IMP dehydrogenase / GMP reductase domain MIS46_00520 PF00571 CBS domain MIS46_00530 PF00654 Voltage gated chloride channel MIS46_00535 PF01814 Hemerythrin HHE cation binding domain MIS46_00540 PF03989 DNA gyrase C-terminal domain, beta-propeller MIS46_00540 PF00521 DNA gyrase/topoisomerase IV, subunit A MIS46_00545 PF00884 Sulfatase MIS46_00550 PF00171 Aldehyde dehydrogenase family MIS46_00555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS46_00585 PF00202 Aminotransferase class-III MIS46_00625 PF00488 MutS domain V MIS46_00625 PF05190 MutS family domain IV MIS46_00625 PF05192 MutS domain III MIS46_00625 PF05188 MutS domain II MIS46_00625 PF01624 MutS domain I MIS46_00635 PF18075 FtsX extracellular domain MIS46_00640 PF00005 ABC transporter MIS46_00645 PF02881 SRP54-type protein, helical bundle domain MIS46_00645 PF02978 Signal peptide binding domain MIS46_00645 PF00448 SRP54-type protein, GTPase domain MIS46_00650 PF06123 Inner membrane protein CreD MIS46_00655 PF00072 Response regulator receiver domain MIS46_00655 PF00486 Transcriptional regulatory protein, C terminal MIS46_00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_00660 PF00512 His Kinase A (phospho-acceptor) domain MIS46_00660 PF00672 HAMP domain MIS46_00665 PF02481 DNA recombination-mediator protein A MIS46_00665 PF17782 DprA winged helix domain MIS46_00670 PF00889 Elongation factor TS MIS46_00675 PF00318 Ribosomal protein S2 MIS46_00680 PF00162 Phosphoglycerate kinase MIS46_00685 PF18073 Rubredoxin metal binding domain MIS46_00695 PF01548 Transposase MIS46_00695 PF02371 Transposase IS116/IS110/IS902 family MIS46_00745 PF01300 Telomere recombination MIS46_00760 PF05662 Coiled stalk of trimeric autotransporter adhesin MIS46_00760 PF03895 YadA-like membrane anchor domain MIS46_00760 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin MIS46_00760 PF13018 Extended Signal Peptide of Type V secretion system MIS46_00765 PF12631 MnmE helical domain MIS46_00765 PF01926 50S ribosome-binding GTPase MIS46_00765 PF10396 GTP-binding protein TrmE N-terminus MIS46_00780 PF18389 TrmO C-terminal domain MIS46_00780 PF01980 tRNA-methyltransferase O MIS46_00800 PF00472 RF-1 domain MIS46_00805 PF00348 Polyprenyl synthetase MIS46_00810 PF02609 Exonuclease VII small subunit MIS46_00815 PF00829 Ribosomal prokaryotic L21 protein MIS46_00820 PF01016 Ribosomal L27 protein MIS46_00830 PF00348 Polyprenyl synthetase MIS46_00835 PF04284 Protein of unknown function (DUF441) MIS46_00855 PF00356 Bacterial regulatory proteins, lacI family MIS46_00860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MIS46_00860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MIS46_00865 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MIS46_00870 PF07690 Major Facilitator Superfamily MIS46_00875 PF01906 Putative heavy-metal-binding MIS46_00880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MIS46_00880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MIS46_00885 PF01012 Electron transfer flavoprotein domain MIS46_00890 PF00766 Electron transfer flavoprotein FAD-binding domain MIS46_00890 PF01012 Electron transfer flavoprotein domain MIS46_00895 PF07977 FabA-like domain MIS46_00900 PF00132 Bacterial transferase hexapeptide (six repeats) MIS46_00900 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MIS46_00920 PF03471 Transporter associated domain MIS46_00920 PF00999 Sodium/hydrogen exchanger family MIS46_00920 PF02080 TrkA-C domain MIS46_00925 PF02562 PhoH-like protein MIS46_00930 PF01235 Sodium:alanine symporter family MIS46_00955 PF08264 Anticodon-binding domain of tRNA MIS46_00955 PF06827 Zinc finger found in FPG and IleRS MIS46_00955 PF00133 tRNA synthetases class I (I, L, M and V) MIS46_00960 PF18071 HMW1C N-terminal MIS46_00960 PF18254 HMW1 domain 2 MIS46_00975 PF00476 DNA polymerase family A MIS46_00975 PF01612 3'-5' exonuclease MIS46_00975 PF01367 5'-3' exonuclease, C-terminal SAM fold MIS46_00975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MIS46_00980 PF02075 Crossover junction endodeoxyribonuclease RuvC MIS46_00985 PF00664 ABC transporter transmembrane region MIS46_00985 PF00005 ABC transporter MIS46_01000 PF02321 Outer membrane efflux protein MIS46_01005 PF02600 Disulfide bond formation protein DsbB MIS46_01010 PF01925 Sulfite exporter TauE/SafE MIS46_01020 PF00092 von Willebrand factor type A domain MIS46_01020 PF12034 Domain of unknown function (DUF3520) MIS46_01020 PF12450 von Willebrand factor MIS46_01025 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MIS46_01025 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MIS46_01025 PF13288 DXP reductoisomerase C-terminal domain MIS46_01030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MIS46_01050 PF00114 Pilin (bacterial filament) MIS46_01050 PF07963 Prokaryotic N-terminal methylation motif MIS46_01055 PF00114 Pilin (bacterial filament) MIS46_01055 PF07963 Prokaryotic N-terminal methylation motif MIS46_01060 PF02843 Phosphoribosylglycinamide synthetase, C domain MIS46_01060 PF02844 Phosphoribosylglycinamide synthetase, N domain MIS46_01060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MIS46_01070 PF00696 Amino acid kinase family MIS46_01075 PF01220 Dehydroquinase class II MIS46_01085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MIS46_01085 PF00056 lactate/malate dehydrogenase, NAD binding domain MIS46_01090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS46_01090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_01100 PF00132 Bacterial transferase hexapeptide (six repeats) MIS46_01100 PF12804 MobA-like NTP transferase domain MIS46_01115 PF01594 AI-2E family transporter MIS46_01125 PF00533 BRCA1 C Terminus (BRCT) domain MIS46_01125 PF01653 NAD-dependent DNA ligase adenylation domain MIS46_01125 PF12826 Helix-hairpin-helix motif MIS46_01125 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MIS46_01125 PF03120 NAD-dependent DNA ligase OB-fold domain MIS46_01145 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MIS46_01150 PF02163 Peptidase family M50 MIS46_01150 PF17820 PDZ domain MIS46_01155 PF01103 Surface antigen MIS46_01155 PF07244 Surface antigen variable number repeat MIS46_01165 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MIS46_01165 PF00132 Bacterial transferase hexapeptide (six repeats) MIS46_01175 PF07681 DoxX MIS46_01180 PF01435 Peptidase family M48 MIS46_01180 PF07720 Tetratricopeptide repeat MIS46_01185 PF01906 Putative heavy-metal-binding MIS46_01190 PF01906 Putative heavy-metal-binding MIS46_01200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS46_01200 PF07498 Rho termination factor, N-terminal domain MIS46_01200 PF07497 Rho termination factor, RNA-binding domain MIS46_01205 PF00793 DAHP synthetase I family MIS46_01220 PF01330 RuvA N terminal domain MIS46_01220 PF07499 RuvA, C-terminal domain MIS46_01225 PF01510 N-acetylmuramoyl-L-alanine amidase MIS46_01235 PF00342 Phosphoglucose isomerase MIS46_01240 PF02685 Glucokinase MIS46_01240 PF01380 SIS domain MIS46_01240 PF01418 Helix-turn-helix domain, rpiR family MIS46_01245 PF00293 NUDIX domain MIS46_01250 PF02685 Glucokinase MIS46_01255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MIS46_01260 PF01810 LysE type translocator MIS46_01270 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MIS46_01270 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MIS46_01275 PF00920 Dehydratase family MIS46_01280 PF00300 Histidine phosphatase superfamily (branch 1) MIS46_01285 PF00535 Glycosyl transferase family 2 MIS46_01305 PF01928 CYTH domain MIS46_01310 PF00830 Ribosomal L28 family MIS46_01315 PF00471 Ribosomal protein L33 MIS46_01320 PF05675 Protein of unknown function (DUF817) MIS46_01325 PF01081 KDPG and KHG aldolase MIS46_01335 PF00593 TonB dependent receptor MIS46_01335 PF07715 TonB-dependent Receptor Plug Domain MIS46_01340 PF03143 Elongation factor Tu C-terminal domain MIS46_01340 PF03144 Elongation factor Tu domain 2 MIS46_01340 PF00009 Elongation factor Tu GTP binding domain MIS46_01345 PF00338 Ribosomal protein S10p/S20e MIS46_01350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MIS46_01355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MIS46_01370 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MIS46_01375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MIS46_01395 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MIS46_01395 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MIS46_01395 PF10531 SLBB domain MIS46_01405 PF04480 Protein of unknown function (DUF559) MIS46_01410 PF00384 Molybdopterin oxidoreductase MIS46_01410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MIS46_01410 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MIS46_01415 PF00146 NADH dehydrogenase MIS46_01420 PF12838 4Fe-4S dicluster domain MIS46_01425 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MIS46_01430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MIS46_01445 PF00361 Proton-conducting membrane transporter MIS46_01445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MIS46_01450 PF00857 Isochorismatase family MIS46_01455 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus MIS46_01455 PF00361 Proton-conducting membrane transporter MIS46_01460 PF00361 Proton-conducting membrane transporter MIS46_01465 PF00465 Iron-containing alcohol dehydrogenase MIS46_01470 PF01116 Fructose-bisphosphate aldolase class-II MIS46_01480 PF09382 RQC domain MIS46_01480 PF16124 RecQ zinc-binding MIS46_01480 PF00570 HRDC domain MIS46_01480 PF00271 Helicase conserved C-terminal domain MIS46_01480 PF00270 DEAD/DEAH box helicase MIS46_01485 PF01336 OB-fold nucleic acid binding domain MIS46_01485 PF00152 tRNA synthetases class II (D, K and N) MIS46_01490 PF08447 PAS fold MIS46_01490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIS46_01500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIS46_01500 PF08447 PAS fold MIS46_01510 PF00571 CBS domain MIS46_01510 PF03741 Integral membrane protein TerC family MIS46_01510 PF03471 Transporter associated domain MIS46_01515 PF00696 Amino acid kinase family MIS46_01520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIS46_01520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIS46_01530 PF13520 Amino acid permease MIS46_01535 PF01380 SIS domain MIS46_01540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MIS46_01555 PF02542 YgbB family MIS46_01580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MIS46_01590 PF01025 GrpE MIS46_01600 PF00860 Permease family MIS46_01605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIS46_01610 PF00149 Calcineurin-like phosphoesterase MIS46_01620 PF01556 DnaJ C terminal domain MIS46_01620 PF00226 DnaJ domain MIS46_01620 PF00684 DnaJ central domain MIS46_01625 PF01699 Sodium/calcium exchanger protein MIS46_01630 PF00920 Dehydratase family MIS46_01650 PF08264 Anticodon-binding domain of tRNA MIS46_01650 PF10458 Valyl tRNA synthetase tRNA binding arm MIS46_01650 PF00133 tRNA synthetases class I (I, L, M and V) MIS46_01665 PF01432 Peptidase family M3 MIS46_01675 PF02810 SEC-C motif MIS46_01675 PF07517 SecA DEAD-like domain MIS46_01675 PF07516 SecA Wing and Scaffold domain MIS46_01675 PF01043 SecA preprotein cross-linking domain MIS46_01685 PF01814 Hemerythrin HHE cation binding domain MIS46_01690 PF01963 TraB family MIS46_01695 PF16325 Peptidase family U32 C-terminal domain MIS46_01695 PF01136 Peptidase family U32 MIS46_01715 PF00535 Glycosyl transferase family 2 MIS46_01720 PF02563 Polysaccharide biosynthesis/export protein MIS46_01730 PF01061 ABC-2 type transporter MIS46_01735 PF00005 ABC transporter MIS46_01745 PF00127 Copper binding proteins, plastocyanin/azurin family MIS46_01780 PF00483 Nucleotidyl transferase MIS46_01800 PF01368 DHH family MIS46_01800 PF17768 RecJ OB domain MIS46_01800 PF02272 DHHA1 domain MIS46_01805 PF00300 Histidine phosphatase superfamily (branch 1) MIS46_01815 PF02632 BioY family MIS46_01825 PF02492 CobW/HypB/UreG, nucleotide-binding domain MIS46_01825 PF07683 Cobalamin synthesis protein cobW C-terminal domain MIS46_01830 PF00535 Glycosyl transferase family 2 MIS46_01845 PF04357 TamB, inner membrane protein subunit of TAM complex MIS46_01855 PF00886 Ribosomal protein S16 MIS46_01860 PF05239 PRC-barrel domain MIS46_01860 PF01782 RimM N-terminal domain MIS46_01865 PF01746 tRNA (Guanine-1)-methyltransferase MIS46_01870 PF01245 Ribosomal protein L19 MIS46_01875 PF02545 Maf-like protein MIS46_01880 PF02620 Large ribosomal RNA subunit accumulation protein YceD MIS46_01885 PF01783 Ribosomal L32p protein family MIS46_01895 PF02504 Fatty acid synthesis protein MIS46_01900 PF00267 Gram-negative porin MIS46_01910 PF07670 Nucleoside recognition MIS46_01910 PF07664 Ferrous iron transport protein B C terminus MIS46_01910 PF02421 Ferrous iron transport protein B MIS46_01920 PF01206 Sulfurtransferase TusA MIS46_01930 PF02580 D-Tyr-tRNA(Tyr) deacylase MIS46_01935 PF01168 Alanine racemase, N-terminal domain MIS46_01935 PF00842 Alanine racemase, C-terminal domain MIS46_01940 PF01042 Endoribonuclease L-PSP MIS46_01945 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MIS46_01955 PF00483 Nucleotidyl transferase MIS46_01960 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS46_01965 PF02649 Type I GTP cyclohydrolase folE2 MIS46_01975 PF00588 SpoU rRNA Methylase family MIS46_01980 PF00156 Phosphoribosyl transferase domain MIS46_01985 PF03448 MgtE intracellular N domain MIS46_01985 PF01769 Divalent cation transporter MIS46_01985 PF00571 CBS domain MIS46_01990 PF14821 Threonine synthase N terminus MIS46_01990 PF00291 Pyridoxal-phosphate dependent enzyme MIS46_01995 PF13416 Bacterial extracellular solute-binding protein MIS46_02005 PF00166 Chaperonin 10 Kd subunit MIS46_02015 PF00118 TCP-1/cpn60 chaperonin family MIS46_02020 PF11734 TilS substrate C-terminal domain MIS46_02020 PF00156 Phosphoribosyl transferase domain MIS46_02020 PF01171 PP-loop family MIS46_02030 PF00893 Small Multidrug Resistance protein MIS46_02040 PF12706 Beta-lactamase superfamily domain MIS46_02045 PF01037 Lrp/AsnC ligand binding domain MIS46_02070 PF01235 Sodium:alanine symporter family MIS46_02075 PF00255 Glutathione peroxidase MIS46_02085 PF00072 Response regulator receiver domain MIS46_02090 PF02895 Signal transducing histidine kinase, homodimeric domain MIS46_02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_02090 PF07194 P2 response regulator binding domain MIS46_02090 PF01584 CheW-like domain MIS46_02090 PF01627 Hpt domain MIS46_02095 PF01709 Transcriptional regulator MIS46_02105 PF00119 ATP synthase A chain MIS46_02110 PF00137 ATP synthase subunit C MIS46_02115 PF00430 ATP synthase B/B' CF(0) MIS46_02120 PF00213 ATP synthase delta (OSCP) subunit MIS46_02125 PF00306 ATP synthase alpha/beta chain, C terminal domain MIS46_02125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS46_02125 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIS46_02130 PF00231 ATP synthase MIS46_02135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIS46_02135 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIS46_02140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MIS46_02140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MIS46_02145 PF02811 PHP domain MIS46_02145 PF14579 Helix-hairpin-helix motif MIS46_02145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MIS46_02145 PF07733 Bacterial DNA polymerase III alpha NTPase domain MIS46_02145 PF01336 OB-fold nucleic acid binding domain MIS46_02155 PF16658 Class II release factor RF3, C-terminal domain MIS46_02155 PF03144 Elongation factor Tu domain 2 MIS46_02155 PF00009 Elongation factor Tu GTP binding domain MIS46_02160 PF06956 Regulator of RNA terminal phosphate cyclase MIS46_02160 PF00158 Sigma-54 interaction domain MIS46_02185 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family MIS46_02205 PF03099 Biotin/lipoate A/B protein ligase family MIS46_02205 PF03309 Type III pantothenate kinase MIS46_02205 PF02237 Biotin protein ligase C terminal domain MIS46_02210 PF04228 Putative neutral zinc metallopeptidase MIS46_02250 PF01386 Ribosomal L25p family MIS46_02250 PF14693 Ribosomal protein TL5, C-terminal domain MIS46_02255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MIS46_02255 PF14572 Phosphoribosyl synthetase-associated domain MIS46_02270 PF08544 GHMP kinases C terminal MIS46_02270 PF00288 GHMP kinases N terminal domain MIS46_02275 PF03550 Outer membrane lipoprotein LolB MIS46_02285 PF12147 Putative methyltransferase MIS46_02285 PF12146 Serine aminopeptidase, S33 MIS46_02295 PF03739 Lipopolysaccharide export system permease LptF/LptG MIS46_02315 PF13180 PDZ domain MIS46_02315 PF03572 Peptidase family S41 MIS46_02320 PF17946 RecC C-terminal domain MIS46_02360 PF02470 MlaD protein MIS46_02365 PF02405 Permease MlaE MIS46_02375 PF00005 ABC transporter MIS46_02395 PF00925 GTP cyclohydrolase II MIS46_02410 PF04474 Protein of unknown function (DUF554) MIS46_02415 PF01966 HD domain MIS46_02420 PF00300 Histidine phosphatase superfamily (branch 1) MIS46_02420 PF00934 PE family MIS46_02425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIS46_02430 PF08676 MutL C terminal dimerisation domain MIS46_02430 PF01119 DNA mismatch repair protein, C-terminal domain MIS46_02440 PF08335 GlnD PII-uridylyltransferase MIS46_02440 PF03710 Glutamate-ammonia ligase adenylyltransferase MIS46_02445 PF01430 Hsp33 protein MIS46_02470 PF01784 NIF3 (NGG1p interacting factor 3) MIS46_02475 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MIS46_02475 PF00355 Rieske [2Fe-2S] domain MIS46_02480 PF00033 Cytochrome b/b6/petB MIS46_02480 PF00032 Cytochrome b(C-terminal)/b6/petD MIS46_02485 PF02167 Cytochrome C1 family MIS46_02520 PF02899 Phage integrase, N-terminal SAM-like domain MIS46_02520 PF00589 Phage integrase family MIS46_02530 PF00950 ABC 3 transport family MIS46_02550 PF04977 Septum formation initiator MIS46_02555 PF03952 Enolase, N-terminal domain MIS46_02555 PF00113 Enolase, C-terminal TIM barrel domain MIS46_02575 PF01649 Ribosomal protein S20 MIS46_02580 PF03831 PhnA domain MIS46_02580 PF08274 PhnA Zinc-Ribbon MIS46_02590 PF01636 Phosphotransferase enzyme family MIS46_02595 PF04453 LPS transport system D MIS46_02600 PF09312 SurA N-terminal domain MIS46_02600 PF00639 PPIC-type PPIASE domain MIS46_02610 PF01039 Carboxyl transferase domain MIS46_02610 PF17848 Acetyl-coA carboxylase zinc finger domain MIS46_02615 PF01975 Survival protein SurE MIS46_02620 PF01451 Low molecular weight phosphotyrosine protein phosphatase MIS46_02645 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_02650 PF00012 Hsp70 protein MIS46_02670 PF01618 MotA/TolQ/ExbB proton channel family MIS46_02675 PF02472 Biopolymer transport protein ExbD/TolR MIS46_02690 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_02695 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_02700 PF00005 ABC transporter MIS46_02705 PF05683 Fumarase C-terminus MIS46_02705 PF05681 Fumarate hydratase (Fumerase) MIS46_02715 PF02910 Fumarate reductase flavoprotein C-term MIS46_02715 PF00890 FAD binding domain MIS46_02720 PF10531 SLBB domain MIS46_02720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MIS46_02720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MIS46_02725 PF00939 Sodium:sulfate symporter transmembrane region MIS46_02745 PF01541 GIY-YIG catalytic domain MIS46_02745 PF00929 Exonuclease MIS46_02750 PF00719 Inorganic pyrophosphatase MIS46_02755 PF03796 DnaB-like helicase C terminal domain MIS46_02755 PF00772 DnaB-like helicase N terminal domain MIS46_02795 PF01668 SmpB protein MIS46_02800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MIS46_02810 PF00885 6,7-dimethyl-8-ribityllumazine synthase MIS46_02815 PF01029 NusB family MIS46_02830 PF03129 Anticodon binding domain MIS46_02830 PF02824 TGS domain MIS46_02830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS46_02830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIS46_02835 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_02845 PF01170 Putative RNA methylase family UPF0020 MIS46_02845 PF02926 THUMP domain MIS46_02865 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIS46_02880 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MIS46_02880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIS46_02885 PF00312 Ribosomal protein S15 MIS46_02895 PF02677 Epoxyqueuosine reductase QueH MIS46_02900 PF02824 TGS domain MIS46_02900 PF04607 Region found in RelA / SpoT proteins MIS46_02900 PF13291 ACT domain MIS46_02920 PF00216 Bacterial DNA-binding protein MIS46_02925 PF00575 S1 RNA binding domain MIS46_02930 PF02224 Cytidylate kinase MIS46_02935 PF00923 Transaldolase/Fructose-6-phosphate aldolase MIS46_02940 PF08502 LeuA allosteric (dimerisation) domain MIS46_02940 PF00682 HMGL-like MIS46_02945 PF00034 Cytochrome c MIS46_02945 PF03150 Di-haem cytochrome c peroxidase MIS46_02950 PF01588 Putative tRNA binding domain MIS46_02950 PF09334 tRNA synthetases class I (M) MIS46_02950 PF08264 Anticodon-binding domain of tRNA MIS46_02960 PF13746 4Fe-4S dicluster domain MIS46_02960 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MIS46_02960 PF12801 4Fe-4S binding domain MIS46_02965 PF06969 HemN C-terminal domain MIS46_02965 PF04055 Radical SAM superfamily MIS46_02970 PF04325 Protein of unknown function (DUF465) MIS46_02975 PF02223 Thymidylate kinase MIS46_02985 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS46_02995 PF04279 Intracellular septation protein A MIS46_03000 PF03795 YCII-related domain MIS46_03015 PF00561 alpha/beta hydrolase fold MIS46_03025 PF05198 Translation initiation factor IF-3, N-terminal domain MIS46_03025 PF00707 Translation initiation factor IF-3, C-terminal domain MIS46_03030 PF01632 Ribosomal protein L35 MIS46_03035 PF00453 Ribosomal protein L20 MIS46_03040 PF14437 MafB19-like deaminase MIS46_03045 PF04542 Sigma-70 region 2 MIS46_03045 PF04545 Sigma-70, region 4 MIS46_03045 PF00140 Sigma-70 factor, region 1.2 MIS46_03050 PF01702 Queuine tRNA-ribosyltransferase MIS46_03055 PF02660 Glycerol-3-phosphate acyltransferase MIS46_03060 PF02152 Dihydroneopterin aldolase MIS46_03065 PF00850 Histone deacetylase domain MIS46_03075 PF01208 Uroporphyrinogen decarboxylase (URO-D) MIS46_03085 PF02535 ZIP Zinc transporter MIS46_03090 PF00398 Ribosomal RNA adenine dimethylase MIS46_03115 PF00005 ABC transporter MIS46_03120 PF03605 Anaerobic c4-dicarboxylate membrane transporter MIS46_03125 PF07715 TonB-dependent Receptor Plug Domain MIS46_03125 PF00593 TonB dependent receptor MIS46_03130 PF00149 Calcineurin-like phosphoesterase MIS46_03135 PF12002 MgsA AAA+ ATPase C terminal MIS46_03135 PF16193 AAA C-terminal domain MIS46_03135 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_03165 PF01066 CDP-alcohol phosphatidyltransferase MIS46_03170 PF01464 Transglycosylase SLT domain MIS46_03170 PF01476 LysM domain MIS46_03170 PF01464 Transglycosylase SLT domain MIS46_03170 PF01476 LysM domain MIS46_03185 PF02132 RecR protein MIS46_03185 PF13662 Toprim domain MIS46_03190 PF00692 dUTPase MIS46_03200 PF04381 Putative exonuclease, RdgC MIS46_03220 PF00271 Helicase conserved C-terminal domain MIS46_03220 PF00270 DEAD/DEAH box helicase MIS46_03225 PF04060 Putative Fe-S cluster MIS46_03230 PF02195 ParB-like nuclease domain MIS46_03230 PF17762 HTH domain found in ParB protein MIS46_03235 PF01467 Cytidylyltransferase-like MIS46_03245 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MIS46_03275 PF16363 GDP-mannose 4,6 dehydratase MIS46_03280 PF00005 ABC transporter MIS46_03285 PF04321 RmlD substrate binding domain MIS46_03295 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MIS46_03300 PF00849 RNA pseudouridylate synthase MIS46_03305 PF00750 tRNA synthetases class I (R) MIS46_03305 PF05746 DALR anticodon binding domain MIS46_03305 PF03485 Arginyl tRNA synthetase N terminal domain MIS46_03310 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIS46_03310 PF00588 SpoU rRNA Methylase family MIS46_03320 PF00005 ABC transporter MIS46_03320 PF00664 ABC transporter transmembrane region MIS46_03325 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_03330 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_03335 PF08402 TOBE domain MIS46_03335 PF00005 ABC transporter MIS46_03340 PF02254 TrkA-N domain MIS46_03340 PF02080 TrkA-C domain MIS46_03355 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIS46_03355 PF00588 SpoU rRNA Methylase family MIS46_03375 PF16921 Tex protein YqgF-like domain MIS46_03375 PF09371 Tex-like protein N-terminal domain MIS46_03375 PF17674 HHH domain MIS46_03375 PF00575 S1 RNA binding domain MIS46_03395 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_03400 PF00933 Glycosyl hydrolase family 3 N terminal domain MIS46_03405 PF01026 TatD related DNase MIS46_03415 PF09115 DNA polymerase III, delta subunit, C terminal MIS46_03450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS46_03450 PF02403 Seryl-tRNA synthetase N-terminal domain MIS46_03465 PF04403 Paraquat-inducible protein A MIS46_03470 PF08361 MAATS-type transcriptional repressor, C-terminal region MIS46_03470 PF00440 Bacterial regulatory proteins, tetR family MIS46_03475 PF00529 HlyD membrane-fusion protein of T1SS MIS46_03475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS46_03480 PF00873 AcrB/AcrD/AcrF family MIS46_03490 PF01098 Cell cycle protein MIS46_03495 PF03033 Glycosyltransferase family 28 N-terminal domain MIS46_03495 PF04101 Glycosyltransferase family 28 C-terminal domain MIS46_03500 PF02541 Ppx/GppA phosphatase family MIS46_03510 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_03525 PF01850 PIN domain MIS46_03530 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MIS46_03540 PF04851 Type III restriction enzyme, res subunit MIS46_03540 PF00271 Helicase conserved C-terminal domain MIS46_03540 PF12344 Ultra-violet resistance protein B MIS46_03540 PF17757 UvrB interaction domain MIS46_03540 PF02151 UvrB/uvrC motif MIS46_03560 PF01022 Bacterial regulatory protein, arsR family MIS46_03565 PF00581 Rhodanese-like domain MIS46_03565 PF11127 Protein of unknown function (DUF2892) MIS46_03575 PF00464 Serine hydroxymethyltransferase MIS46_03580 PF02785 Biotin carboxylase C-terminal domain MIS46_03580 PF00289 Biotin carboxylase, N-terminal domain MIS46_03580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MIS46_03595 PF00364 Biotin-requiring enzyme MIS46_03610 PF00581 Rhodanese-like domain MIS46_03615 PF02652 L-lactate permease MIS46_03620 PF02589 LUD domain MIS46_03620 PF13183 4Fe-4S dicluster domain MIS46_03620 PF11870 Domain of unknown function (DUF3390) MIS46_03625 PF02589 LUD domain MIS46_03630 PF02754 Cysteine-rich domain MIS46_03635 PF17764 3′ DNA-binding domain (3′BD) MIS46_03635 PF00271 Helicase conserved C-terminal domain MIS46_03635 PF18074 Primosomal protein N C-terminal domain MIS46_03635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MIS46_03635 PF00270 DEAD/DEAH box helicase MIS46_03640 PF02219 Methylenetetrahydrofolate reductase MIS46_03645 PF01717 Cobalamin-independent synthase, Catalytic domain MIS46_03645 PF08267 Cobalamin-independent synthase, N-terminal domain MIS46_03650 PF02565 Recombination protein O C terminal MIS46_03650 PF11967 Recombination protein O N terminal MIS46_03655 PF00270 DEAD/DEAH box helicase MIS46_03655 PF00271 Helicase conserved C-terminal domain MIS46_03655 PF17191 RecG wedge domain MIS46_03660 PF01551 Peptidase family M23 MIS46_03670 PF00557 Metallopeptidase family M24 MIS46_03675 PF02673 Bacitracin resistance protein BacA MIS46_03690 PF13335 Magnesium chelatase, subunit ChlI C-terminal MIS46_03690 PF01078 Magnesium chelatase, subunit ChlI MIS46_03695 PF04380 Membrane fusogenic activity MIS46_03705 PF02772 S-adenosylmethionine synthetase, central domain MIS46_03705 PF00438 S-adenosylmethionine synthetase, N-terminal domain MIS46_03705 PF02773 S-adenosylmethionine synthetase, C-terminal domain MIS46_03715 PF00155 Aminotransferase class I and II MIS46_03720 PF03553 Na+/H+ antiporter family MIS46_03725 PF00391 PEP-utilising enzyme, mobile domain MIS46_03725 PF02896 PEP-utilising enzyme, TIM barrel domain MIS46_03725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MIS46_03740 PF02899 Phage integrase, N-terminal SAM-like domain MIS46_03740 PF00589 Phage integrase family MIS46_03755 PF00117 Glutamine amidotransferase class-I MIS46_03755 PF02540 NAD synthase MIS46_03755 PF00958 GMP synthase C terminal domain MIS46_03765 PF01258 Prokaryotic dksA/traR C4-type zinc finger MIS46_03775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_03775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS46_03780 PF01029 NusB family MIS46_03780 PF01189 16S rRNA methyltransferase RsmB/F MIS46_03790 PF00989 PAS fold MIS46_03790 PF00512 His Kinase A (phospho-acceptor) domain MIS46_03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_03790 PF00672 HAMP domain MIS46_03795 PF02954 Bacterial regulatory protein, Fis family MIS46_03795 PF00158 Sigma-54 interaction domain MIS46_03795 PF00072 Response regulator receiver domain MIS46_03800 PF03102 NeuB family MIS46_03800 PF08666 SAF domain MIS46_03805 PF12704 MacB-like periplasmic core domain MIS46_03805 PF02687 FtsX-like permease family MIS46_03810 PF00005 ABC transporter MIS46_03825 PF02253 Phospholipase A1 MIS46_03860 PF01336 OB-fold nucleic acid binding domain MIS46_03860 PF00152 tRNA synthetases class II (D, K and N) MIS46_03860 PF02938 GAD domain MIS46_03865 PF02595 Glycerate kinase family MIS46_03880 PF00270 DEAD/DEAH box helicase MIS46_03880 PF11898 Domain of unknown function (DUF3418) MIS46_03880 PF04408 Helicase associated domain (HA2) MIS46_03880 PF00271 Helicase conserved C-terminal domain MIS46_03880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MIS46_03895 PF01797 Transposase IS200 like MIS46_03900 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MIS46_03900 PF00271 Helicase conserved C-terminal domain MIS46_03900 PF04408 Helicase associated domain (HA2) MIS46_03900 PF11898 Domain of unknown function (DUF3418) MIS46_03900 PF00270 DEAD/DEAH box helicase MIS46_03905 PF07728 AAA domain (dynein-related subfamily) MIS46_03925 PF02447 GntP family permease MIS46_03930 PF12724 Flavodoxin domain MIS46_03935 PF00311 Phosphoenolpyruvate carboxylase MIS46_03940 PF00128 Alpha amylase, catalytic domain MIS46_03945 PF17209 Hfq protein MIS46_03955 PF01551 Peptidase family M23 MIS46_03955 PF01476 LysM domain MIS46_03965 PF07943 Penicillin-binding protein 5, C-terminal domain MIS46_03965 PF00768 D-alanyl-D-alanine carboxypeptidase MIS46_03970 PF10518 TAT (twin-arginine translocation) pathway signal sequence MIS46_03970 PF00149 Calcineurin-like phosphoesterase MIS46_03980 PF01521 Iron-sulphur cluster biosynthesis MIS46_03990 PF01592 NifU-like N terminal domain MIS46_04015 PF00266 Aminotransferase class-V MIS46_04020 PF02082 Transcriptional regulator MIS46_04025 PF02664 S-Ribosylhomocysteinase (LuxS) MIS46_04030 PF01048 Phosphorylase superfamily MIS46_04035 PF01381 Helix-turn-helix MIS46_04075 PF00768 D-alanyl-D-alanine carboxypeptidase MIS46_04080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIS46_04080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIS46_04080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIS46_04080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIS46_04085 PF07687 Peptidase dimerisation domain MIS46_04085 PF01546 Peptidase family M20/M25/M40 MIS46_04090 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MIS46_04090 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MIS46_04095 PF01409 tRNA synthetases class II core domain (F) MIS46_04095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MIS46_04115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MIS46_04115 PF01588 Putative tRNA binding domain MIS46_04115 PF03147 Ferredoxin-fold anticodon binding domain MIS46_04115 PF03484 tRNA synthetase B5 domain MIS46_04115 PF03483 B3/4 domain MIS46_04125 PF13193 AMP-binding enzyme C-terminal domain MIS46_04125 PF00501 AMP-binding enzyme MIS46_04200 PF07352 Bacteriophage Mu Gam like protein MIS46_04215 PF00216 Bacterial DNA-binding protein MIS46_04220 PF06252 Protein of unknown function (DUF1018) MIS46_04300 PF04233 Phage Mu protein F like protein MIS46_04405 PF01476 LysM domain MIS46_04410 PF01327 Polypeptide deformylase MIS46_04460 PF17676 LD-carboxypeptidase C-terminal domain MIS46_04460 PF02016 LD-carboxypeptidase N-terminal domain MIS46_04465 PF01842 ACT domain MIS46_04465 PF01817 Chorismate mutase type II MIS46_04465 PF00800 Prephenate dehydratase MIS46_04470 PF12805 FUSC-like inner membrane protein yccS MIS46_04475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIS46_04475 PF02770 Acyl-CoA dehydrogenase, middle domain MIS46_04475 PF12806 Acetyl-CoA dehydrogenase C-terminal like MIS46_04475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIS46_04480 PF00403 Heavy-metal-associated domain MIS46_04485 PF00403 Heavy-metal-associated domain MIS46_04490 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) MIS46_04495 PF02769 AIR synthase related protein, C-terminal domain MIS46_04495 PF00586 AIR synthase related protein, N-terminal domain MIS46_04505 PF02719 Polysaccharide biosynthesis protein MIS46_04510 PF01207 Dihydrouridine synthase (Dus) MIS46_04535 PF00291 Pyridoxal-phosphate dependent enzyme MIS46_04540 PF07726 ATPase family associated with various cellular activities (AAA) MIS46_04540 PF17863 AAA lid domain MIS46_04545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MIS46_04545 PF02779 Transketolase, pyrimidine binding domain MIS46_04545 PF02780 Transketolase, C-terminal domain MIS46_04550 PF00156 Phosphoribosyl transferase domain MIS46_04565 PF08245 Mur ligase middle domain MIS46_04565 PF02875 Mur ligase family, glutamate ligase domain MIS46_04575 PF05175 Methyltransferase small domain MIS46_04585 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_04590 PF08275 DNA primase catalytic core, N-terminal domain MIS46_04590 PF10410 DnaB-helicase binding domain of primase MIS46_04590 PF08278 DNA primase DnaG DnaB-binding MIS46_04590 PF01807 CHC2 zinc finger MIS46_04595 PF00149 Calcineurin-like phosphoesterase MIS46_04595 PF02872 5'-nucleotidase, C-terminal domain MIS46_04600 PF03412 Peptidase C39 family MIS46_04600 PF00005 ABC transporter MIS46_04600 PF00664 ABC transporter transmembrane region MIS46_04605 PF01725 Ham1 family MIS46_04610 PF00578 AhpC/TSA family MIS46_04620 PF07690 Major Facilitator Superfamily MIS46_04625 PF00691 OmpA family MIS46_04625 PF13488 Glycine zipper MIS46_04640 PF01515 Phosphate acetyl/butaryl transferase MIS46_04640 PF07085 DRTGG domain MIS46_04645 PF02659 Putative manganese efflux pump MIS46_04655 PF03601 Conserved hypothetical protein 698 MIS46_04660 PF07021 Methionine biosynthesis protein MetW MIS46_04660 PF00561 alpha/beta hydrolase fold MIS46_04670 PF00561 alpha/beta hydrolase fold MIS46_04675 PF02824 TGS domain MIS46_04675 PF04607 Region found in RelA / SpoT proteins MIS46_04675 PF13291 ACT domain MIS46_04680 PF01192 RNA polymerase Rpb6 MIS46_04685 PF00625 Guanylate kinase MIS46_04690 PF00834 Ribulose-phosphate 3 epimerase family MIS46_04695 PF14815 NUDIX domain MIS46_04695 PF00730 HhH-GPD superfamily base excision DNA repair protein MIS46_04695 PF10576 Iron-sulfur binding domain of endonuclease III MIS46_04695 PF00633 Helix-hairpin-helix motif MIS46_04700 PF01026 TatD related DNase MIS46_04705 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MIS46_04705 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MIS46_04710 PF01040 UbiA prenyltransferase family MIS46_04715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIS46_04715 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS46_04720 PF00155 Aminotransferase class I and II MIS46_04735 PF00149 Calcineurin-like phosphoesterase MIS46_04745 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_04745 PF00107 Zinc-binding dehydrogenase MIS46_04750 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_04760 PF02769 AIR synthase related protein, C-terminal domain MIS46_04760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MIS46_04760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MIS46_04765 PF00970 Oxidoreductase FAD-binding domain MIS46_04765 PF00175 Oxidoreductase NAD-binding domain MIS46_04775 PF00580 UvrD/REP helicase N-terminal domain MIS46_04775 PF13361 UvrD-like helicase C-terminal domain MIS46_04780 PF00905 Penicillin binding protein transpeptidase domain MIS46_04780 PF00912 Transglycosylase MIS46_04780 PF17092 Penicillin-binding protein OB-like domain MIS46_04805 PF03958 Bacterial type II/III secretion system short domain MIS46_04805 PF00263 Bacterial type II and III secretion system protein MIS46_04805 PF11741 AMIN domain MIS46_04805 PF07660 Secretin and TonB N terminus short domain MIS46_04810 PF01202 Shikimate kinase MIS46_04815 PF01761 3-dehydroquinate synthase MIS46_04825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIS46_04830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIS46_04835 PF00120 Glutamine synthetase, catalytic domain MIS46_04835 PF03951 Glutamine synthetase, beta-Grasp domain MIS46_04855 PF01180 Dihydroorotate dehydrogenase MIS46_04860 PF17862 AAA+ lid domain MIS46_04860 PF06480 FtsH Extracellular MIS46_04860 PF01434 Peptidase family M41 MIS46_04860 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_04865 PF01728 FtsJ-like methyltransferase MIS46_04870 PF00970 Oxidoreductase FAD-binding domain MIS46_04870 PF00175 Oxidoreductase NAD-binding domain MIS46_04880 PF05661 Protein of unknown function (DUF808) MIS46_04920 PF00266 Aminotransferase class-V MIS46_04925 PF00815 Histidinol dehydrogenase MIS46_04935 PF01634 ATP phosphoribosyltransferase MIS46_04940 PF02630 SCO1/SenC MIS46_04945 PF00912 Transglycosylase MIS46_04950 PF01488 Shikimate / quinate 5-dehydrogenase MIS46_04950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MIS46_04950 PF08501 Shikimate dehydrogenase substrate binding domain MIS46_04955 PF03471 Transporter associated domain MIS46_04955 PF00571 CBS domain MIS46_04960 PF02130 Uncharacterized protein family UPF0054 MIS46_04965 PF05175 Methyltransferase small domain MIS46_04970 PF00005 ABC transporter MIS46_04970 PF06472 ABC transporter transmembrane region 2 MIS46_04975 PF00593 TonB dependent receptor MIS46_04975 PF07715 TonB-dependent Receptor Plug Domain MIS46_04980 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MIS46_04980 PF01464 Transglycosylase SLT domain MIS46_04990 PF00248 Aldo/keto reductase family MIS46_05000 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ MIS46_05010 PF00180 Isocitrate/isopropylmalate dehydrogenase MIS46_05015 PF03616 Sodium/glutamate symporter MIS46_05025 PF02698 DUF218 domain MIS46_05030 PF00218 Indole-3-glycerol phosphate synthase MIS46_05040 PF03279 Bacterial lipid A biosynthesis acyltransferase MIS46_05045 PF00155 Aminotransferase class I and II MIS46_05050 PF00475 Imidazoleglycerol-phosphate dehydratase MIS46_05075 PF02675 S-adenosylmethionine decarboxylase MIS46_05085 PF07690 Major Facilitator Superfamily MIS46_05100 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MIS46_05100 PF01433 Peptidase family M1 domain MIS46_05100 PF11940 Domain of unknown function (DUF3458) Ig-like fold MIS46_05120 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MIS46_05125 PF01523 Putative modulator of DNA gyrase MIS46_05135 PF02637 GatB domain MIS46_05135 PF02934 GatB/GatE catalytic domain MIS46_05145 PF08245 Mur ligase middle domain MIS46_05145 PF02875 Mur ligase family, glutamate ligase domain MIS46_05150 PF04076 Bacterial OB fold (BOF) protein MIS46_05175 PF03060 Nitronate monooxygenase MIS46_05185 PF01842 ACT domain MIS46_05185 PF03447 Homoserine dehydrogenase, NAD binding domain MIS46_05185 PF00742 Homoserine dehydrogenase MIS46_05190 PF02779 Transketolase, pyrimidine binding domain MIS46_05190 PF00456 Transketolase, thiamine diphosphate binding domain MIS46_05190 PF02780 Transketolase, C-terminal domain MIS46_05195 PF00324 Amino acid permease MIS46_05200 PF01171 PP-loop family MIS46_05210 PF08340 Domain of unknown function (DUF1732) MIS46_05210 PF03755 YicC-like family, N-terminal region MIS46_05215 PF00849 RNA pseudouridylate synthase MIS46_05220 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS46_05225 PF02817 e3 binding domain MIS46_05225 PF00364 Biotin-requiring enzyme MIS46_05225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MIS46_05230 PF03891 Domain of unknown function (DUF333) MIS46_05235 PF00456 Transketolase, thiamine diphosphate binding domain MIS46_05235 PF17831 Pyruvate dehydrogenase E1 component middle domain MIS46_05240 PF02386 Cation transport protein MIS46_05255 PF00692 dUTPase MIS46_05280 PF01521 Iron-sulphur cluster biosynthesis MIS46_05285 PF00575 S1 RNA binding domain MIS46_05285 PF10150 Ribonuclease E/G family MIS46_05295 PF04551 GcpE protein MIS46_05300 PF13464 Domain of unknown function (DUF4115) MIS46_05310 PF04055 Radical SAM superfamily MIS46_05315 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_05320 PF00334 Nucleoside diphosphate kinase MIS46_05330 PF01593 Flavin containing amine oxidoreductase MIS46_05335 PF00106 short chain dehydrogenase MIS46_05345 PF01791 DeoC/LacD family aldolase MIS46_05360 PF00035 Double-stranded RNA binding motif MIS46_05360 PF14622 Ribonuclease-III-like MIS46_05365 PF00156 Phosphoribosyl transferase domain MIS46_05375 PF01926 50S ribosome-binding GTPase MIS46_05375 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MIS46_05390 PF09976 Tetratricopeptide repeat-like domain MIS46_05395 PF13393 Histidyl-tRNA synthetase MIS46_05395 PF03129 Anticodon binding domain MIS46_05410 PF01479 S4 domain MIS46_05410 PF00849 RNA pseudouridylate synthase MIS46_05415 PF01597 Glycine cleavage H-protein MIS46_05420 PF00698 Acyl transferase domain MIS46_05445 PF00294 pfkB family carbohydrate kinase MIS46_05455 PF00551 Formyl transferase MIS46_05455 PF02911 Formyl transferase, C-terminal domain MIS46_05465 PF02441 Flavoprotein MIS46_05475 PF10609 NUBPL iron-transfer P-loop NTPase MIS46_05480 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MIS46_05485 PF01502 Phosphoribosyl-AMP cyclohydrolase MIS46_05490 PF05981 CreA protein MIS46_05495 PF04079 Segregation and condensation complex subunit ScpB MIS46_05500 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MIS46_05510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MIS46_05510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MIS46_05515 PF03725 3' exoribonuclease family, domain 2 MIS46_05515 PF01138 3' exoribonuclease family, domain 1 MIS46_05515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MIS46_05515 PF00013 KH domain MIS46_05515 PF00575 S1 RNA binding domain MIS46_05520 PF02699 Preprotein translocase subunit MIS46_05525 PF02355 Protein export membrane protein MIS46_05525 PF07549 SecD/SecF GG Motif MIS46_05525 PF13721 SecD export protein N-terminal TM region MIS46_05530 PF02355 Protein export membrane protein MIS46_05530 PF07549 SecD/SecF GG Motif MIS46_05535 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS46_05550 PF01138 3' exoribonuclease family, domain 1 MIS46_05550 PF03725 3' exoribonuclease family, domain 2 MIS46_05560 PF01479 S4 domain MIS46_05570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MIS46_05575 PF02348 Cytidylyltransferase MIS46_05580 PF04575 Protein of unknown function (DUF560) MIS46_05590 PF17483 C-lobe handle domain of Tf-binding protein B MIS46_05590 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B MIS46_05590 PF17484 N-Lobe handle Tf-binding protein B MIS46_05600 PF03956 Lysine exporter LysO MIS46_05605 PF00814 Glycoprotease family MIS46_05610 PF02021 Uncharacterised protein family UPF0102 MIS46_05615 PF13580 SIS domain MIS46_05620 PF04972 BON domain MIS46_05635 PF12848 ABC transporter MIS46_05635 PF00005 ABC transporter MIS46_05645 PF03167 Uracil DNA glycosylase superfamily MIS46_05650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MIS46_05655 PF01384 Phosphate transporter family MIS46_05660 PF00578 AhpC/TSA family MIS46_05670 PF01926 50S ribosome-binding GTPase MIS46_05675 PF06039 Malate:quinone oxidoreductase (Mqo) MIS46_05680 PF00291 Pyridoxal-phosphate dependent enzyme MIS46_05680 PF00585 C-terminal regulatory domain of Threonine dehydratase MIS46_05700 PF00075 RNase H MIS46_05705 PF00684 DnaJ central domain MIS46_05705 PF01556 DnaJ C terminal domain MIS46_05705 PF00226 DnaJ domain MIS46_05715 PF03372 Endonuclease/Exonuclease/phosphatase family MIS46_05720 PF06689 ClpX C4-type zinc finger MIS46_05720 PF10431 C-terminal, D2-small domain, of ClpB protein MIS46_05720 PF07724 AAA domain (Cdc48 subfamily) MIS46_05725 PF01037 Lrp/AsnC ligand binding domain MIS46_05735 PF00005 ABC transporter MIS46_05740 PF00171 Aldehyde dehydrogenase family MIS46_05745 PF00677 Lumazine binding domain MIS46_05750 PF00709 Adenylosuccinate synthetase MIS46_05780 PF13393 Histidyl-tRNA synthetase MIS46_05790 PF01472 PUA domain MIS46_05790 PF00696 Amino acid kinase family MIS46_05795 PF00579 tRNA synthetases class I (W and Y) MIS46_05805 PF01926 50S ribosome-binding GTPase MIS46_05810 PF00034 Cytochrome c MIS46_05815 PF05140 ResB-like family MIS46_05825 PF07963 Prokaryotic N-terminal methylation motif MIS46_05830 PF07963 Prokaryotic N-terminal methylation motif MIS46_05830 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MIS46_05835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MIS46_05835 PF00205 Thiamine pyrophosphate enzyme, central domain MIS46_05835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MIS46_05840 PF10369 Small subunit of acetolactate synthase MIS46_05850 PF01479 S4 domain MIS46_05850 PF00849 RNA pseudouridylate synthase MIS46_05860 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MIS46_05875 PF03900 Porphobilinogen deaminase, C-terminal domain MIS46_05875 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MIS46_05880 PF02082 Transcriptional regulator MIS46_05890 PF03577 Peptidase family C69 MIS46_05895 PF00871 Acetokinase family MIS46_05900 PF01381 Helix-turn-helix MIS46_05905 PF02811 PHP domain MIS46_05910 PF04306 Protein of unknown function (DUF456) MIS46_05920 PF04575 Protein of unknown function (DUF560) MIS46_05925 PF17483 C-lobe handle domain of Tf-binding protein B MIS46_05925 PF17484 N-Lobe handle Tf-binding protein B MIS46_05925 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B MIS46_05930 PF07715 TonB-dependent Receptor Plug Domain MIS46_05930 PF00593 TonB dependent receptor MIS46_05935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIS46_05955 PF00809 Pterin binding enzyme MIS46_05965 PF00437 Type II/IV secretion system protein MIS46_05980 PF14718 Soluble lytic murein transglycosylase L domain MIS46_05980 PF01464 Transglycosylase SLT domain MIS46_05985 PF13417 Glutathione S-transferase, N-terminal domain MIS46_05985 PF04399 Glutaredoxin 2, C terminal domain MIS46_06000 PF00881 Nitroreductase family MIS46_06005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MIS46_06010 PF11741 AMIN domain MIS46_06010 PF01520 N-acetylmuramoyl-L-alanine amidase MIS46_06015 PF00588 SpoU rRNA Methylase family MIS46_06020 PF00543 Nitrogen regulatory protein P-II MIS46_06025 PF02954 Bacterial regulatory protein, Fis family MIS46_06025 PF00072 Response regulator receiver domain MIS46_06025 PF00158 Sigma-54 interaction domain MIS46_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_06030 PF00512 His Kinase A (phospho-acceptor) domain MIS46_06035 PF00521 DNA gyrase/topoisomerase IV, subunit A MIS46_06045 PF12706 Beta-lactamase superfamily domain MIS46_06050 PF01509 TruB family pseudouridylate synthase (N terminal domain) MIS46_06050 PF16198 tRNA pseudouridylate synthase B C-terminal domain MIS46_06050 PF09157 Pseudouridine synthase II TruB, C-terminal MIS46_06055 PF01171 PP-loop family MIS46_06055 PF09179 TilS substrate binding domain MIS46_06060 PF00591 Glycosyl transferase family, a/b domain MIS46_06060 PF02885 Glycosyl transferase family, helical bundle domain MIS46_06070 PF01479 S4 domain MIS46_06070 PF00849 RNA pseudouridylate synthase MIS46_06075 PF00753 Metallo-beta-lactamase superfamily MIS46_06075 PF03772 Competence protein MIS46_06080 PF00009 Elongation factor Tu GTP binding domain MIS46_06080 PF00679 Elongation factor G C-terminus MIS46_06080 PF03144 Elongation factor Tu domain 2 MIS46_06090 PF04445 Putative SAM-dependent methyltransferase MIS46_06105 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA MIS46_06125 PF04717 Type VI secretion system, phage-baseplate injector MIS46_06165 PF00691 OmpA family MIS46_06165 PF05736 OprF membrane domain MIS46_06190 PF02796 Helix-turn-helix domain of resolvase MIS46_06190 PF00239 Resolvase, N terminal domain MIS46_06215 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MIS46_06250 PF10431 C-terminal, D2-small domain, of ClpB protein MIS46_06250 PF17871 AAA lid domain MIS46_06250 PF07724 AAA domain (Cdc48 subfamily) MIS46_06250 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_06255 PF13614 AAA domain MIS46_06310 PF00589 Phage integrase family MIS46_06310 PF13356 Arm DNA-binding domain MIS46_06315 PF13356 Arm DNA-binding domain MIS46_06315 PF14659 Phage integrase, N-terminal SAM-like domain MIS46_06315 PF00589 Phage integrase family MIS46_06325 PF02547 Queuosine biosynthesis protein MIS46_06330 PF00762 Ferrochelatase MIS46_06335 PF00731 AIR carboxylase MIS46_06350 PF02575 YbaB/EbfC DNA-binding family MIS46_06355 PF12848 ABC transporter MIS46_06355 PF16326 ABC transporter C-terminal domain MIS46_06355 PF00005 ABC transporter MIS46_06360 PF02622 Uncharacterized ACR, COG1678 MIS46_06365 PF03652 Holliday junction resolvase MIS46_06375 PF01501 Glycosyl transferase family 8 MIS46_06380 PF03618 Kinase/pyrophosphorylase MIS46_06385 PF00925 GTP cyclohydrolase II MIS46_06385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MIS46_06400 PF00694 Aconitase C-terminal domain MIS46_06425 PF00330 Aconitase family (aconitate hydratase) MIS46_06435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIS46_06435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIS46_06435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIS46_06435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIS46_06440 PF09335 SNARE associated Golgi protein MIS46_06445 PF02548 Ketopantoate hydroxymethyltransferase MIS46_06450 PF07715 TonB-dependent Receptor Plug Domain MIS46_06450 PF00593 TonB dependent receptor MIS46_06460 PF10509 Galactokinase galactose-binding signature MIS46_06460 PF08544 GHMP kinases C terminal MIS46_06460 PF00288 GHMP kinases N terminal domain MIS46_06465 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MIS46_06465 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MIS46_06470 PF13407 Periplasmic binding protein domain MIS46_06475 PF00005 ABC transporter MIS46_06480 PF02653 Branched-chain amino acid transport system / permease component MIS46_06485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIS46_06485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIS46_06490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MIS46_06490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MIS46_06500 PF01810 LysE type translocator MIS46_06505 PF13419 Haloacid dehalogenase-like hydrolase MIS46_06510 PF02631 RecX family MIS46_06520 PF00849 RNA pseudouridylate synthase MIS46_06520 PF01479 S4 domain MIS46_06535 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS46_06540 PF00268 Ribonucleotide reductase, small chain MIS46_06545 PF07687 Peptidase dimerisation domain MIS46_06545 PF01546 Peptidase family M20/M25/M40 MIS46_06550 PF01272 Transcription elongation factor, GreA/GreB, C-term MIS46_06550 PF03449 Transcription elongation factor, N-terminal MIS46_06555 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MIS46_06555 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MIS46_06565 PF02233 NAD(P) transhydrogenase beta subunit MIS46_06570 PF01177 Asp/Glu/Hydantoin racemase MIS46_06575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MIS46_06575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MIS46_06575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MIS46_06585 PF11992 Domain of unknown function (DUF3488) MIS46_06585 PF13559 Domain of unknown function (DUF4129) MIS46_06585 PF01841 Transglutaminase-like superfamily MIS46_06590 PF01636 Phosphotransferase enzyme family MIS46_06595 PF02645 Uncharacterised protein, DegV family COG1307 MIS46_06600 PF01235 Sodium:alanine symporter family MIS46_06605 PF01479 S4 domain MIS46_06605 PF00849 RNA pseudouridylate synthase MIS46_06610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MIS46_06610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MIS46_06615 PF13307 Helicase C-terminal domain MIS46_06615 PF06733 DEAD_2 MIS46_06620 PF00579 tRNA synthetases class I (W and Y) MIS46_06625 PF00462 Glutaredoxin MIS46_06635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS46_06635 PF04073 Aminoacyl-tRNA editing domain MIS46_06635 PF03129 Anticodon binding domain MIS46_06640 PF00892 EamA-like transporter family MIS46_06650 PF02416 mttA/Hcf106 family MIS46_06655 PF02416 mttA/Hcf106 family MIS46_06660 PF00902 Sec-independent protein translocase protein (TatC) MIS46_06665 PF13525 Outer membrane lipoprotein MIS46_06675 PF02954 Bacterial regulatory protein, Fis family MIS46_06680 PF00892 EamA-like transporter family MIS46_06690 PF01808 AICARFT/IMPCHase bienzyme MIS46_06690 PF02142 MGS-like domain MIS46_06695 PF02867 Ribonucleotide reductase, barrel domain MIS46_06695 PF00317 Ribonucleotide reductase, all-alpha domain MIS46_06695 PF03477 ATP cone domain MIS46_06705 PF13538 UvrD-like helicase C-terminal domain MIS46_06710 PF01741 Large-conductance mechanosensitive channel, MscL MIS46_06715 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_06720 PF01207 Dihydrouridine synthase (Dus) MIS46_06725 PF00117 Glutamine amidotransferase class-I MIS46_06730 PF02569 Pantoate-beta-alanine ligase MIS46_06735 PF13145 PPIC-type PPIASE domain MIS46_06740 PF17854 FtsK alpha domain MIS46_06740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MIS46_06740 PF09397 Ftsk gamma domain MIS46_06740 PF01580 FtsK/SpoIIIE family MIS46_06745 PF04452 RNA methyltransferase MIS46_06750 PF00459 Inositol monophosphatase family MIS46_06765 PF00005 ABC transporter MIS46_06765 PF12848 ABC transporter MIS46_06770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS46_06775 PF00216 Bacterial DNA-binding protein MIS46_06780 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_06780 PF02190 ATP-dependent protease La (LON) substrate-binding domain MIS46_06780 PF05362 Lon protease (S16) C-terminal proteolytic domain MIS46_06795 PF04390 Lipopolysaccharide-assembly MIS46_06800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MIS46_06805 PF01648 4'-phosphopantetheinyl transferase superfamily MIS46_06810 PF00005 ABC transporter MIS46_06810 PF12848 ABC transporter MIS46_06820 PF10688 Bacterial inner membrane protein MIS46_06825 PF07650 KH domain MIS46_06825 PF01926 50S ribosome-binding GTPase MIS46_06830 PF06962 Putative rRNA methylase MIS46_06835 PF02578 Multi-copper polyphenol oxidoreductase laccase MIS46_06845 PF00293 NUDIX domain MIS46_06865 PF01292 Prokaryotic cytochrome b561 MIS46_06870 PF02666 Phosphatidylserine decarboxylase MIS46_06880 PF02463 RecF/RecN/SMC N terminal domain MIS46_06915 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS46_06925 PF05958 tRNA (Uracil-5-)-methyltransferase MIS46_06935 PF10502 Signal peptidase, peptidase S26 MIS46_06940 PF02321 Outer membrane efflux protein MIS46_06945 PF00005 ABC transporter MIS46_06945 PF02687 FtsX-like permease family MIS46_06945 PF12704 MacB-like periplasmic core domain MIS46_06950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS46_06970 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_06975 PF04127 DNA / pantothenate metabolism flavoprotein MIS46_06975 PF02441 Flavoprotein MIS46_06985 PF02601 Exonuclease VII, large subunit MIS46_06985 PF13742 OB-fold nucleic acid binding domain MIS46_06990 PF01501 Glycosyl transferase family 8 MIS46_06990 PF00535 Glycosyl transferase family 2 MIS46_06995 PF01168 Alanine racemase, N-terminal domain MIS46_07010 PF03109 ABC1 family MIS46_07015 PF17876 Cold shock domain MIS46_07015 PF08461 Ribonuclease R winged-helix domain MIS46_07015 PF08206 Ribonuclease B OB domain MIS46_07015 PF00773 RNB domain MIS46_07015 PF00575 S1 RNA binding domain MIS46_07025 PF01042 Endoribonuclease L-PSP MIS46_07030 PF01717 Cobalamin-independent synthase, Catalytic domain MIS46_07035 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_07040 PF00873 AcrB/AcrD/AcrF family MIS46_07050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS46_07050 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS46_07060 PF01323 DSBA-like thioredoxin domain MIS46_07065 PF01638 HxlR-like helix-turn-helix MIS46_07075 PF02574 Homocysteine S-methyltransferase MIS46_07075 PF00809 Pterin binding enzyme MIS46_07075 PF02310 B12 binding domain MIS46_07075 PF02965 Vitamin B12 dependent methionine synthase, activation domain MIS46_07075 PF02607 B12 binding domain MIS46_07090 PF00206 Lyase MIS46_07090 PF08328 Adenylosuccinate lyase C-terminal MIS46_07110 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_07120 PF02091 Glycyl-tRNA synthetase alpha subunit MIS46_07130 PF01678 Diaminopimelate epimerase MIS46_07140 PF12705 PD-(D/E)XK nuclease superfamily MIS46_07140 PF00580 UvrD/REP helicase N-terminal domain MIS46_07140 PF13361 UvrD-like helicase C-terminal domain MIS46_07145 PF01027 Inhibitor of apoptosis-promoting Bax1 MIS46_07150 PF00743 Flavin-binding monooxygenase-like MIS46_07155 PF01259 SAICAR synthetase MIS46_07160 PF00132 Bacterial transferase hexapeptide (six repeats) MIS46_07160 PF06426 Serine acetyltransferase, N-terminal MIS46_07170 PF00091 Tubulin/FtsZ family, GTPase domain MIS46_07170 PF12327 FtsZ family, C-terminal domain MIS46_07175 PF02491 SHS2 domain inserted in FTSA MIS46_07185 PF01820 D-ala D-ala ligase N-terminus MIS46_07185 PF07478 D-ala D-ala ligase C-terminus MIS46_07190 PF08245 Mur ligase middle domain MIS46_07190 PF01225 Mur ligase family, catalytic domain MIS46_07190 PF02875 Mur ligase family, glutamate ligase domain MIS46_07195 PF00293 NUDIX domain MIS46_07200 PF00924 Mechanosensitive ion channel MIS46_07200 PF12794 Mechanosensitive ion channel inner membrane domain 1 MIS46_07200 PF12795 Mechanosensitive ion channel porin domain MIS46_07205 PF03129 Anticodon binding domain MIS46_07205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIS46_07205 PF04073 Aminoacyl-tRNA editing domain MIS46_07215 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS46_07235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MIS46_07235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MIS46_07240 PF00303 Thymidylate synthase MIS46_07245 PF07690 Major Facilitator Superfamily MIS46_07250 PF00175 Oxidoreductase NAD-binding domain MIS46_07250 PF00111 2Fe-2S iron-sulfur cluster binding domain MIS46_07250 PF00970 Oxidoreductase FAD-binding domain MIS46_07260 PF00710 Asparaginase, N-terminal MIS46_07260 PF17763 Glutaminase/Asparaginase C-terminal domain MIS46_07270 PF00583 Acetyltransferase (GNAT) family MIS46_07275 PF02254 TrkA-N domain MIS46_07275 PF00999 Sodium/hydrogen exchanger family MIS46_07280 PF00186 Dihydrofolate reductase MIS46_07285 PF04247 Invasion gene expression up-regulator, SirB MIS46_07295 PF00551 Formyl transferase MIS46_07300 PF01177 Asp/Glu/Hydantoin racemase MIS46_07305 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MIS46_07310 PF00271 Helicase conserved C-terminal domain MIS46_07310 PF00270 DEAD/DEAH box helicase MIS46_07315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MIS46_07320 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MIS46_07320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MIS46_07325 PF01773 Na+ dependent nucleoside transporter N-terminus MIS46_07325 PF07662 Na+ dependent nucleoside transporter C-terminus MIS46_07325 PF07670 Nucleoside recognition MIS46_07330 PF00591 Glycosyl transferase family, a/b domain MIS46_07330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MIS46_07330 PF02885 Glycosyl transferase family, helical bundle domain MIS46_07335 PF01048 Phosphorylase superfamily MIS46_07340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIS46_07340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_07345 PF00977 Histidine biosynthesis protein MIS46_07350 PF01476 LysM domain MIS46_07350 PF01551 Peptidase family M23 MIS46_07365 PF13520 Amino acid permease MIS46_07370 PF01694 Rhomboid family MIS46_07375 PF00156 Phosphoribosyl transferase domain MIS46_07380 PF13230 Glutamine amidotransferases class-II MIS46_07385 PF02390 Putative methyltransferase MIS46_07390 PF09397 Ftsk gamma domain MIS46_07390 PF17854 FtsK alpha domain MIS46_07390 PF01580 FtsK/SpoIIIE family MIS46_07395 PF01381 Helix-turn-helix MIS46_07400 PF03981 Ubiquinol-cytochrome C chaperone MIS46_07400 PF13099 Domain of unknown function (DUF3944) MIS46_07405 PF00679 Elongation factor G C-terminus MIS46_07405 PF00009 Elongation factor Tu GTP binding domain MIS46_07405 PF06421 GTP-binding protein LepA C-terminus MIS46_07405 PF03144 Elongation factor Tu domain 2 MIS46_07425 PF03960 ArsC family MIS46_07430 PF00459 Inositol monophosphatase family MIS46_07435 PF00892 EamA-like transporter family MIS46_07440 PF05872 Bacterial protein of unknown function (DUF853) MIS46_07450 PF01523 Putative modulator of DNA gyrase MIS46_07455 PF04751 Protein of unknown function (DUF615) MIS46_07465 PF00117 Glutamine amidotransferase class-I MIS46_07465 PF06418 CTP synthase N-terminus MIS46_07470 PF00390 Malic enzyme, N-terminal domain MIS46_07470 PF03949 Malic enzyme, NAD binding domain MIS46_07470 PF01515 Phosphate acetyl/butaryl transferase MIS46_07480 PF00117 Glutamine amidotransferase class-I MIS46_07485 PF00977 Histidine biosynthesis protein MIS46_07495 PF01264 Chorismate synthase MIS46_07500 PF01985 CRS1 / YhbY (CRM) domain MIS46_07505 PF01250 Ribosomal protein S6 MIS46_07515 PF01084 Ribosomal protein S18 MIS46_07520 PF03948 Ribosomal protein L9, C-terminal domain MIS46_07520 PF01281 Ribosomal protein L9, N-terminal domain MIS46_07535 PF02470 MlaD protein MIS46_07545 PF01425 Amidase MIS46_07585 PF02686 Glu-tRNAGln amidotransferase C subunit MIS46_07600 PF04093 rod shape-determining protein MreD MIS46_07605 PF03717 Penicillin-binding Protein dimerisation domain MIS46_07605 PF00905 Penicillin binding protein transpeptidase domain MIS46_07610 PF01098 Cell cycle protein MIS46_07615 PF01914 MarC family integral membrane protein MIS46_07625 PF03658 RnfH family Ubiquitin MIS46_07630 PF01195 Peptidyl-tRNA hydrolase MIS46_07635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MIS46_07655 PF01416 tRNA pseudouridine synthase MIS46_07660 PF18073 Rubredoxin metal binding domain MIS46_07670 PF07690 Major Facilitator Superfamily MIS46_07680 PF16360 GTP-binding GTPase Middle Region MIS46_07680 PF13167 GTP-binding GTPase N-terminal MIS46_07680 PF01926 50S ribosome-binding GTPase MIS46_07690 PF03313 Serine dehydratase alpha chain MIS46_07690 PF03315 Serine dehydratase beta chain MIS46_07695 PF02463 RecF/RecN/SMC N terminal domain MIS46_07695 PF06470 SMC proteins Flexible Hinge Domain MIS46_07700 PF02447 GntP family permease MIS46_07715 PF03449 Transcription elongation factor, N-terminal MIS46_07715 PF01272 Transcription elongation factor, GreA/GreB, C-term MIS46_07725 PF00291 Pyridoxal-phosphate dependent enzyme MIS46_07735 PF15864 Protein glycosylation ligase MIS46_07735 PF04932 O-Antigen ligase MIS46_07735 PF11846 Virulence factor membrane-bound polymerase, C-terminal MIS46_07745 PF01476 LysM domain MIS46_07745 PF01551 Peptidase family M23 MIS46_07745 PF08525 Opacity-associated protein A N-terminal motif MIS46_07780 PF04851 Type III restriction enzyme, res subunit MIS46_07780 PF08774 VRR-NUC domain MIS46_07785 PF18273 Type III R-M EcoP15I C-terminal domain MIS46_07785 PF01555 DNA methylase MIS46_07820 PF04851 Type III restriction enzyme, res subunit MIS46_07820 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MIS46_07820 PF00271 Helicase conserved C-terminal domain MIS46_07820 PF08463 EcoEI R protein C-terminal MIS46_07840 PF00216 Bacterial DNA-binding protein MIS46_07850 PF03840 Preprotein translocase SecG subunit MIS46_07855 PF00121 Triosephosphate isomerase MIS46_07860 PF07743 HSCB C-terminal oligomerisation domain MIS46_07860 PF00226 DnaJ domain MIS46_07865 PF05525 Branched-chain amino acid transport protein MIS46_07870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MIS46_07870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MIS46_07875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIS46_07890 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MIS46_07890 PF00326 Prolyl oligopeptidase family MIS46_07900 PF17864 RuvB AAA lid domain MIS46_07900 PF05491 RuvB C-terminal winged helix domain MIS46_07900 PF05496 Holliday junction DNA helicase RuvB P-loop domain MIS46_07910 PF04539 Sigma-70 region 3 MIS46_07910 PF04545 Sigma-70, region 4 MIS46_07910 PF04542 Sigma-70 region 2 MIS46_07910 PF00140 Sigma-70 factor, region 1.2 MIS46_07910 PF03979 Sigma-70 factor, region 1.1 MIS46_07910 PF04546 Sigma-70, non-essential region MIS46_07915 PF01370 NAD dependent epimerase/dehydratase family MIS46_07920 PF10672 S-adenosylmethionine-dependent methyltransferase MIS46_07925 PF12833 Helix-turn-helix domain MIS46_07925 PF01965 DJ-1/PfpI family MIS46_07930 PF12627 Probable RNA and SrmB- binding site of polymerase A MIS46_07930 PF01966 HD domain MIS46_07930 PF01743 Poly A polymerase head domain MIS46_07935 PF01717 Cobalamin-independent synthase, Catalytic domain MIS46_07945 PF05191 Adenylate kinase, active site lid MIS46_07955 PF00474 Sodium:solute symporter family MIS46_07960 PF00270 DEAD/DEAH box helicase MIS46_07960 PF00271 Helicase conserved C-terminal domain MIS46_07960 PF03461 TRCF domain MIS46_07960 PF17757 UvrB interaction domain MIS46_07960 PF02559 CarD-like/TRCF domain MIS46_07965 PF00881 Nitroreductase family MIS46_07975 PF12706 Beta-lactamase superfamily domain MIS46_07985 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_07985 PF00107 Zinc-binding dehydrogenase MIS46_08000 PF13358 DDE superfamily endonuclease MIS46_08005 PF01555 DNA methylase MIS46_08015 PF00271 Helicase conserved C-terminal domain MIS46_08015 PF00176 SNF2 family N-terminal domain MIS46_08020 PF00756 Putative esterase MIS46_08040 PF13173 AAA domain MIS46_08040 PF13635 Domain of unknown function (DUF4143) MIS46_08050 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_08050 PF00107 Zinc-binding dehydrogenase MIS46_08055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MIS46_08060 PF01850 PIN domain MIS46_08065 PF02525 Flavodoxin-like fold MIS46_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_08080 PF03466 LysR substrate binding domain MIS46_08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_08090 PF03466 LysR substrate binding domain MIS46_08095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS46_08100 PF03060 Nitronate monooxygenase MIS46_08120 PF00893 Small Multidrug Resistance protein MIS46_08130 PF14765 Polyketide synthase dehydratase MIS46_08130 PF00698 Acyl transferase domain MIS46_08130 PF00107 Zinc-binding dehydrogenase MIS46_08130 PF16197 Ketoacyl-synthetase C-terminal extension MIS46_08130 PF00109 Beta-ketoacyl synthase, N-terminal domain MIS46_08130 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_08130 PF08659 KR domain MIS46_08130 PF00550 Phosphopantetheine attachment site MIS46_08130 PF02801 Beta-ketoacyl synthase, C-terminal domain MIS46_08135 PF03466 LysR substrate binding domain MIS46_08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_08140 PF02566 OsmC-like protein MIS46_08145 PF03328 HpcH/HpaI aldolase/citrate lyase family MIS46_08160 PF00881 Nitroreductase family MIS46_08165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MIS46_08165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MIS46_08175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS46_08180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIS46_08185 PF00296 Luciferase-like monooxygenase MIS46_08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_08205 PF03466 LysR substrate binding domain MIS46_08220 PF01638 HxlR-like helix-turn-helix MIS46_08225 PF13302 Acetyltransferase (GNAT) domain MIS46_08225 PF03352 Methyladenine glycosylase MIS46_08225 PF00117 Glutamine amidotransferase class-I MIS46_08225 PF00958 GMP synthase C terminal domain MIS46_08225 PF13673 Acetyltransferase (GNAT) domain MIS46_08250 PF00162 Phosphoglycerate kinase MIS46_08265 PF02615 Malate/L-lactate dehydrogenase MIS46_08275 PF00583 Acetyltransferase (GNAT) family MIS46_08280 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_08290 PF02272 DHHA1 domain MIS46_08290 PF01411 tRNA synthetases class II (A) MIS46_08290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIS46_08295 PF00145 C-5 cytosine-specific DNA methylase MIS46_08300 PF09565 NgoFVII restriction endonuclease MIS46_08315 PF00293 NUDIX domain MIS46_08320 PF16123 Hydroxyacylglutathione hydrolase C-terminus MIS46_08320 PF00753 Metallo-beta-lactamase superfamily MIS46_08330 PF01219 Prokaryotic diacylglycerol kinase MIS46_08340 PF01501 Glycosyl transferase family 8 MIS46_08340 PF00535 Glycosyl transferase family 2 MIS46_08345 PF01040 UbiA prenyltransferase family MIS46_08360 PF00535 Glycosyl transferase family 2 MIS46_08365 PF02397 Bacterial sugar transferase MIS46_08370 PF03883 Peroxide stress protein YaaA MIS46_08375 PF00793 DAHP synthetase I family MIS46_08380 PF01380 SIS domain MIS46_08380 PF00571 CBS domain MIS46_08405 PF00005 ABC transporter MIS46_08405 PF12399 Branched-chain amino acid ATP-binding cassette transporter MIS46_08410 PF04552 Sigma-54, DNA binding domain MIS46_08410 PF04963 Sigma-54 factor, core binding domain MIS46_08410 PF00309 Sigma-54 factor, Activator interacting domain (AID) MIS46_08415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MIS46_08420 PF02527 rRNA small subunit methyltransferase G MIS46_08425 PF13614 AAA domain MIS46_08430 PF00210 Ferritin-like domain MIS46_08435 PF00210 Ferritin-like domain MIS46_08440 PF00701 Dihydrodipicolinate synthetase family MIS46_08445 PF06804 NlpB/DapX lipoprotein MIS46_08455 PF00953 Glycosyl transferase family 4 MIS46_08460 PF01225 Mur ligase family, catalytic domain MIS46_08460 PF02875 Mur ligase family, glutamate ligase domain MIS46_08460 PF08245 Mur ligase middle domain MIS46_08475 PF04198 Putative sugar-binding domain MIS46_08485 PF00294 pfkB family carbohydrate kinase MIS46_08500 PF01791 DeoC/LacD family aldolase MIS46_08505 PF00884 Sulfatase MIS46_08520 PF02463 RecF/RecN/SMC N terminal domain MIS46_08525 PF01225 Mur ligase family, catalytic domain MIS46_08525 PF02875 Mur ligase family, glutamate ligase domain MIS46_08525 PF08245 Mur ligase middle domain MIS46_08540 PF03717 Penicillin-binding Protein dimerisation domain MIS46_08540 PF00905 Penicillin binding protein transpeptidase domain MIS46_08550 PF01795 MraW methylase family MIS46_08555 PF02381 MraZ protein, putative antitoxin-like MIS46_08565 PF01381 Helix-turn-helix MIS46_08590 PF00230 Major intrinsic protein MIS46_08595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MIS46_08600 PF07690 Major Facilitator Superfamily MIS46_08605 PF00436 Single-strand binding protein family MIS46_08610 PF01435 Peptidase family M48 MIS46_08620 PF00472 RF-1 domain MIS46_08620 PF03462 PCRF domain MIS46_08635 PF01850 PIN domain MIS46_08645 PF18073 Rubredoxin metal binding domain MIS46_08655 PF01063 Amino-transferase class IV MIS46_08665 PF01189 16S rRNA methyltransferase RsmB/F MIS46_08665 PF01029 NusB family MIS46_08670 PF06969 HemN C-terminal domain MIS46_08670 PF04055 Radical SAM superfamily MIS46_08675 PF00027 Cyclic nucleotide-binding domain MIS46_08675 PF13545 Crp-like helix-turn-helix domain MIS46_08680 PF00486 Transcriptional regulatory protein, C terminal MIS46_08680 PF00072 Response regulator receiver domain MIS46_08685 PF00672 HAMP domain MIS46_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_08685 PF00512 His Kinase A (phospho-acceptor) domain MIS46_08685 PF16750 Sensor domain of 2-component histidine kinase MIS46_08690 PF16363 GDP-mannose 4,6 dehydratase MIS46_08695 PF07690 Major Facilitator Superfamily MIS46_08705 PF03193 RsgA GTPase MIS46_08715 PF13439 Glycosyltransferase Family 4 MIS46_08715 PF00534 Glycosyl transferases group 1 MIS46_08725 PF03222 Tryptophan/tyrosine permease family MIS46_08730 PF01467 Cytidylyltransferase-like MIS46_08745 PF13302 Acetyltransferase (GNAT) domain MIS46_08750 PF00294 pfkB family carbohydrate kinase MIS46_08755 PF00132 Bacterial transferase hexapeptide (six repeats) MIS46_08770 PF01926 50S ribosome-binding GTPase MIS46_08770 PF06071 Protein of unknown function (DUF933) MIS46_08780 PF03807 NADP oxidoreductase coenzyme F420-dependent MIS46_08780 PF14748 Pyrroline-5-carboxylate reductase dimerisation MIS46_08785 PF01979 Amidohydrolase family MIS46_08790 PF11798 IMS family HHH motif MIS46_08790 PF11799 impB/mucB/samB family C-terminal domain MIS46_08790 PF00817 impB/mucB/samB family MIS46_08795 PF04384 Iron-sulphur cluster assembly MIS46_08800 PF01256 Carbohydrate kinase MIS46_08805 PF01553 Acyltransferase MIS46_08815 PF01266 FAD dependent oxidoreductase MIS46_08815 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MIS46_08830 PF02603 HPr Serine kinase N terminus MIS46_08830 PF07475 HPr Serine kinase C-terminal domain MIS46_08835 PF03668 P-loop ATPase protein family MIS46_08840 PF08335 GlnD PII-uridylyltransferase MIS46_08840 PF01966 HD domain MIS46_08845 PF00529 HlyD membrane-fusion protein of T1SS MIS46_08845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIS46_08855 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MIS46_08860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIS46_08860 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIS46_08865 PF00462 Glutaredoxin MIS46_08865 PF08534 Redoxin MIS46_08880 PF00313 'Cold-shock' DNA-binding domain MIS46_08885 PF02617 ATP-dependent Clp protease adaptor protein ClpS MIS46_08890 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_08890 PF07724 AAA domain (Cdc48 subfamily) MIS46_08890 PF02861 Clp amino terminal domain, pathogenicity island component MIS46_08890 PF10431 C-terminal, D2-small domain, of ClpB protein MIS46_08890 PF17871 AAA lid domain MIS46_08895 PF01565 FAD binding domain MIS46_08895 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MIS46_08900 PF01300 Telomere recombination MIS46_08905 PF02464 Competence-damaged protein MIS46_08910 PF07072 Cell division protein MIS46_08915 PF01121 Dephospho-CoA kinase MIS46_08920 PF01478 Type IV leader peptidase family MIS46_08920 PF06750 Bacterial Peptidase A24 N-terminal domain MIS46_08925 PF00482 Type II secretion system (T2SS), protein F MIS46_08930 PF00437 Type II/IV secretion system protein MIS46_08930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MIS46_08940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MIS46_08945 PF04305 Protein of unknown function (DUF455) MIS46_08950 PF03548 Outer membrane lipoprotein carrier protein LolA MIS46_08955 PF03702 Anhydro-N-acetylmuramic acid kinase MIS46_08960 PF02033 Ribosome-binding factor A MIS46_08965 PF00085 Thioredoxin MIS46_08970 PF12169 DNA polymerase III subunits gamma and tau domain III MIS46_08970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MIS46_08970 PF12170 DNA polymerase III tau subunit V interacting with alpha MIS46_08975 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) MIS46_08995 PF01435 Peptidase family M48 MIS46_09000 PF11412 Disulphide bond corrector protein DsbC MIS46_09000 PF02683 Cytochrome C biogenesis protein transmembrane region MIS46_09000 PF00085 Thioredoxin MIS46_09005 PF00005 ABC transporter MIS46_09010 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_09015 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_09020 PF02503 Polyphosphate kinase middle domain MIS46_09020 PF13090 Polyphosphate kinase C-terminal domain 2 MIS46_09020 PF17941 Polyphosphate kinase C-terminal domain 1 MIS46_09020 PF13089 Polyphosphate kinase N-terminal domain MIS46_09025 PF00881 Nitroreductase family MIS46_09030 PF13419 Haloacid dehalogenase-like hydrolase MIS46_09040 PF01513 ATP-NAD kinase MIS46_09055 PF13409 Glutathione S-transferase, N-terminal domain MIS46_09075 PF00986 DNA gyrase B subunit, carboxyl terminus MIS46_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_09075 PF01751 Toprim domain MIS46_09075 PF18053 DNA gyrase B subunit insert domain MIS46_09075 PF00204 DNA gyrase B MIS46_09090 PF00005 ABC transporter MIS46_09095 PF01790 Prolipoprotein diacylglyceryl transferase MIS46_09100 PF04055 Radical SAM superfamily MIS46_09100 PF01938 TRAM domain MIS46_09100 PF00919 Uncharacterized protein family UPF0004 MIS46_09105 PF01053 Cys/Met metabolism PLP-dependent enzyme MIS46_09135 PF05167 Uncharacterised ACR (DUF711) MIS46_09145 PF01565 FAD binding domain MIS46_09145 PF09330 D-lactate dehydrogenase, membrane binding MIS46_09155 PF13091 PLD-like domain MIS46_09165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MIS46_09175 PF00696 Amino acid kinase family MIS46_09175 PF01842 ACT domain MIS46_09175 PF13840 ACT domain MIS46_09180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MIS46_09180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MIS46_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_09185 PF03466 LysR substrate binding domain MIS46_09190 PF03631 Virulence factor BrkB MIS46_09195 PF01467 Cytidylyltransferase-like MIS46_09200 PF11067 Protein of unknown function (DUF2868) MIS46_09215 PF01491 Frataxin-like domain MIS46_09230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MIS46_09230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MIS46_09235 PF00437 Type II/IV secretion system protein MIS46_09240 PF00437 Type II/IV secretion system protein MIS46_09245 PF12111 Polyribonucleotide phosphorylase C terminal MIS46_09245 PF00575 S1 RNA binding domain MIS46_09245 PF10150 Ribonuclease E/G family MIS46_09250 PF01479 S4 domain MIS46_09250 PF00849 RNA pseudouridylate synthase MIS46_09290 PF13180 PDZ domain MIS46_09295 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_09300 PF04359 Protein of unknown function (DUF493) MIS46_09305 PF03099 Biotin/lipoate A/B protein ligase family MIS46_09315 PF00106 short chain dehydrogenase MIS46_09330 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MIS46_09330 PF04055 Radical SAM superfamily MIS46_09335 PF01555 DNA methylase MIS46_09340 PF04851 Type III restriction enzyme, res subunit MIS46_09345 PF03806 AbgT putative transporter family MIS46_09350 PF00814 Glycoprotease family MIS46_09355 PF01207 Dihydrouridine synthase (Dus) MIS46_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_09360 PF03466 LysR substrate binding domain MIS46_09365 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_09370 PF13416 Bacterial extracellular solute-binding protein MIS46_09385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MIS46_09390 PF03776 Septum formation topological specificity factor MinE MIS46_09395 PF03466 LysR substrate binding domain MIS46_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_09405 PF00308 Bacterial dnaA protein MIS46_09410 PF02682 Carboxyltransferase domain, subdomain C and D MIS46_09415 PF02626 Carboxyltransferase domain, subdomain A and B MIS46_09420 PF03746 LamB/YcsF family MIS46_09440 PF01566 Natural resistance-associated macrophage protein MIS46_09445 PF02092 Glycyl-tRNA synthetase beta subunit MIS46_09445 PF05746 DALR anticodon binding domain MIS46_09460 PF07922 Glycosyltransferase family 52 MIS46_09465 PF01943 Polysaccharide biosynthesis protein MIS46_09475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MIS46_09475 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIS46_09480 PF08207 Elongation factor P (EF-P) KOW-like domain MIS46_09480 PF01132 Elongation factor P (EF-P) OB domain MIS46_09480 PF09285 Elongation factor P, C-terminal MIS46_09545 PF03553 Na+/H+ antiporter family MIS46_09545 PF13726 Na+-H+ antiporter family MIS46_09560 PF03458 UPF0126 domain MIS46_09565 PF02687 FtsX-like permease family MIS46_09565 PF12704 MacB-like periplasmic core domain MIS46_09565 PF00005 ABC transporter MIS46_09595 PF00290 Tryptophan synthase alpha chain MIS46_09600 PF00375 Sodium:dicarboxylate symporter family MIS46_09610 PF04102 SlyX MIS46_09615 PF00293 NUDIX domain MIS46_09635 PF04760 Translation initiation factor IF-2, N-terminal region MIS46_09635 PF11987 Translation-initiation factor 2 MIS46_09635 PF00009 Elongation factor Tu GTP binding domain MIS46_09640 PF13184 NusA-like KH domain MIS46_09640 PF08529 NusA N-terminal domain MIS46_09645 PF02576 RimP N-terminal domain MIS46_09645 PF17384 RimP C-terminal SH3 domain MIS46_09655 PF00085 Thioredoxin MIS46_09660 PF18541 RuvC endonuclease subdomain 3 MIS46_09660 PF13395 HNH endonuclease MIS46_09665 PF01867 CRISPR associated protein Cas1 MIS46_09670 PF09827 CRISPR associated protein Cas2 MIS46_09675 PF17755 UvrA DNA-binding domain MIS46_09675 PF17760 UvrA interaction domain MIS46_09695 PF03462 PCRF domain MIS46_09695 PF00472 RF-1 domain MIS46_09700 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain MIS46_09700 PF04263 Thiamin pyrophosphokinase, catalytic domain MIS46_09710 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MIS46_09720 PF01475 Ferric uptake regulator family MIS46_09725 PF04355 SmpA / OmlA family MIS46_09730 PF05173 Dihydrodipicolinate reductase, C-terminus MIS46_09730 PF01113 Dihydrodipicolinate reductase, N-terminus MIS46_09735 PF01066 CDP-alcohol phosphatidyltransferase MIS46_09740 PF01268 Formate--tetrahydrofolate ligase MIS46_09750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MIS46_09760 PF07732 Multicopper oxidase MIS46_09765 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIS46_09780 PF10431 C-terminal, D2-small domain, of ClpB protein MIS46_09780 PF17871 AAA lid domain MIS46_09780 PF07724 AAA domain (Cdc48 subfamily) MIS46_09780 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_09855 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MIS46_09880 PF02796 Helix-turn-helix domain of resolvase MIS46_09880 PF00239 Resolvase, N terminal domain MIS46_09905 PF05736 OprF membrane domain MIS46_09905 PF00691 OmpA family MIS46_09930 PF06715 Gp5 C-terminal repeat (3 copies) MIS46_09930 PF04717 Type VI secretion system, phage-baseplate injector MIS46_09955 PF05593 RHS Repeat MIS46_09955 PF03527 RHS protein MIS46_09960 PF03527 RHS protein MIS46_09960 PF05593 RHS Repeat MIS46_10045 PF00403 Heavy-metal-associated domain MIS46_10050 PF01613 Flavin reductase like domain MIS46_10055 PF00083 Sugar (and other) transporter MIS46_10055 PF08946 Osmosensory transporter coiled coil MIS46_10065 PF02633 Creatinine amidohydrolase MIS46_10070 PF00892 EamA-like transporter family MIS46_10080 PF00986 DNA gyrase B subunit, carboxyl terminus MIS46_10080 PF01751 Toprim domain MIS46_10080 PF00204 DNA gyrase B MIS46_10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIS46_10095 PF01554 MatE MIS46_10105 PF06508 Queuosine biosynthesis protein QueC MIS46_10110 PF07690 Major Facilitator Superfamily MIS46_10115 PF00860 Permease family MIS46_10120 PF02566 OsmC-like protein MIS46_10130 PF16200 C-terminal region of band_7 MIS46_10130 PF01145 SPFH domain / Band 7 family MIS46_10135 PF02798 Glutathione S-transferase, N-terminal domain MIS46_10135 PF00043 Glutathione S-transferase, C-terminal domain MIS46_10140 PF04386 Stringent starvation protein B MIS46_10150 PF05164 Cell division protein ZapA MIS46_10160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MIS46_10160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MIS46_10175 PF02618 YceG-like family MIS46_10180 PF01197 Ribosomal protein L31 MIS46_10185 PF00444 Ribosomal protein L36 MIS46_10195 PF04261 Dyp-type peroxidase family MIS46_10220 PF04002 RadC-like JAB domain MIS46_10225 PF00005 ABC transporter MIS46_10235 PF01032 FecCD transport family MIS46_10250 PF00490 Delta-aminolevulinic acid dehydratase MIS46_10265 PF00883 Cytosol aminopeptidase family, catalytic domain MIS46_10275 PF05175 Methyltransferase small domain MIS46_10275 PF17827 PrmC N-terminal domain MIS46_10290 PF02348 Cytidylyltransferase MIS46_10295 PF03966 Trm112p-like protein MIS46_10310 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MIS46_10315 PF00483 Nucleotidyl transferase MIS46_10330 PF00899 ThiF family MIS46_10340 PF00753 Metallo-beta-lactamase superfamily MIS46_10345 PF01842 ACT domain MIS46_10345 PF02153 Prephenate dehydrogenase MIS46_10350 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_10355 PF01687 Riboflavin kinase MIS46_10355 PF06574 FAD synthetase MIS46_10360 PF00005 ABC transporter MIS46_10365 PF01047 MarR family MIS46_10370 PF00210 Ferritin-like domain MIS46_10375 PF02566 OsmC-like protein MIS46_10385 PF01032 FecCD transport family MIS46_10395 PF13635 Domain of unknown function (DUF4143) MIS46_10395 PF13173 AAA domain MIS46_10405 PF01032 FecCD transport family MIS46_10415 PF01497 Periplasmic binding protein MIS46_10430 PF00154 recA bacterial DNA recombination protein MIS46_10435 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_10435 PF00107 Zinc-binding dehydrogenase MIS46_10440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MIS46_10440 PF01872 RibD C-terminal domain MIS46_10445 PF04715 Anthranilate synthase component I, N terminal region MIS46_10445 PF00425 chorismate binding enzyme MIS46_10465 PF02545 Maf-like protein MIS46_10470 PF02028 BCCT, betaine/carnitine/choline family transporter MIS46_10485 PF02616 Segregation and condensation protein ScpA MIS46_10495 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MIS46_10495 PF14602 Hexapeptide repeat of succinyl-transferase MIS46_10505 PF13406 Transglycosylase SLT domain MIS46_10510 PF02810 SEC-C motif MIS46_10515 PF02774 Semialdehyde dehydrogenase, dimerisation domain MIS46_10515 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIS46_10525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIS46_10535 PF08264 Anticodon-binding domain of tRNA MIS46_10535 PF00133 tRNA synthetases class I (I, L, M and V) MIS46_10535 PF13603 Leucyl-tRNA synthetase, Domain 2 MIS46_10535 PF09334 tRNA synthetases class I (M) MIS46_10595 PF01322 Cytochrome C' MIS46_10600 PF00106 short chain dehydrogenase MIS46_10610 PF05360 yiaA/B two helix domain MIS46_10615 PF01381 Helix-turn-helix MIS46_10625 PF01578 Cytochrome C assembly protein MIS46_10635 PF00005 ABC transporter MIS46_10635 PF09383 NIL domain MIS46_10640 PF00528 Binding-protein-dependent transport system inner membrane component MIS46_10645 PF03180 NLPA lipoprotein MIS46_10650 PF02678 Pirin MIS46_10650 PF05726 Pirin C-terminal cupin domain MIS46_10655 PF00795 Carbon-nitrogen hydrolase MIS46_10660 PF02540 NAD synthase MIS46_10670 PF03144 Elongation factor Tu domain 2 MIS46_10670 PF00009 Elongation factor Tu GTP binding domain MIS46_10670 PF14492 Elongation Factor G, domain II MIS46_10670 PF03764 Elongation factor G, domain IV MIS46_10670 PF00679 Elongation factor G C-terminus MIS46_10675 PF00177 Ribosomal protein S7p/S5e MIS46_10680 PF00164 Ribosomal protein S12/S23 MIS46_10690 PF00580 UvrD/REP helicase N-terminal domain MIS46_10690 PF13361 UvrD-like helicase C-terminal domain MIS46_10695 PF04324 BFD-like [2Fe-2S] binding domain MIS46_10705 PF01255 Putative undecaprenyl diphosphate synthase MIS46_10715 PF09335 SNARE associated Golgi protein MIS46_10720 PF00675 Insulinase (Peptidase family M16) MIS46_10720 PF05193 Peptidase M16 inactive domain MIS46_10725 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_10730 PF00199 Catalase MIS46_10730 PF06628 Catalase-related immune-responsive MIS46_10735 PF01066 CDP-alcohol phosphatidyltransferase MIS46_10740 PF01209 ubiE/COQ5 methyltransferase family MIS46_10770 PF01343 Peptidase family S49 MIS46_10770 PF06965 Na+/H+ antiporter 1 MIS46_10780 PF14743 DNA ligase OB-like domain MIS46_10780 PF01068 ATP dependent DNA ligase domain MIS46_10785 PF03466 LysR substrate binding domain MIS46_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIS46_10790 PF01255 Putative undecaprenyl diphosphate synthase MIS46_10795 PF03023 Lipid II flippase MurJ MIS46_10800 PF04361 Protein of unknown function (DUF494) MIS46_10805 PF17761 DUF1016 N-terminal domain MIS46_10805 PF06250 YhcG PDDEXK nuclease domain MIS46_10810 PF13368 Topoisomerase C-terminal repeat MIS46_10810 PF01131 DNA topoisomerase MIS46_10810 PF01751 Toprim domain MIS46_10830 PF05992 SbmA/BacA-like family MIS46_10845 PF04715 Anthranilate synthase component I, N terminal region MIS46_10845 PF00425 chorismate binding enzyme MIS46_10885 PF00574 Clp protease MIS46_10890 PF05698 Bacterial trigger factor protein (TF) C-terminus MIS46_10890 PF05697 Bacterial trigger factor protein (TF) MIS46_10890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIS46_10895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MIS46_10900 PF18027 Cytosolic carboxypeptidase N-terminal domain MIS46_10900 PF00246 Zinc carboxypeptidase MIS46_10905 PF13533 Biotin-lipoyl like MIS46_10910 PF08240 Alcohol dehydrogenase GroES-like domain MIS46_10910 PF00107 Zinc-binding dehydrogenase MIS46_10915 PF02590 Predicted SPOUT methyltransferase MIS46_10920 PF00691 OmpA family MIS46_10925 PF00462 Glutaredoxin MIS46_10930 PF02556 Preprotein translocase subunit SecB MIS46_10935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIS46_10940 PF00929 Exonuclease MIS46_10965 PF00004 ATPase family associated with various cellular activities (AAA) MIS46_10965 PF07724 AAA domain (Cdc48 subfamily) MIS46_10965 PF17871 AAA lid domain MIS46_10965 PF02861 Clp amino terminal domain, pathogenicity island component MIS46_10965 PF10431 C-terminal, D2-small domain, of ClpB protein MIS46_10980 PF01765 Ribosome recycling factor MIS46_10985 PF00155 Aminotransferase class I and II MIS46_11000 PF01565 FAD binding domain MIS46_11000 PF02913 FAD linked oxidases, C-terminal domain MIS46_11020 PF00929 Exonuclease MIS46_11025 PF01467 Cytidylyltransferase-like MIS46_11030 PF00484 Carbonic anhydrase MIS46_11040 PF01297 Zinc-uptake complex component A periplasmic MIS46_11045 PF00005 ABC transporter MIS46_11060 PF10531 SLBB domain MIS46_11065 PF00380 Ribosomal protein S9/S16 MIS46_11070 PF00572 Ribosomal protein L13 MIS46_11075 PF00860 Permease family MIS46_11080 PF02222 ATP-grasp domain MIS46_11080 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MIS46_11115 PF05524 PEP-utilising enzyme, N-terminal MIS46_11115 PF00391 PEP-utilising enzyme, mobile domain MIS46_11115 PF02896 PEP-utilising enzyme, TIM barrel domain MIS46_11120 PF00381 PTS HPr component phosphorylation site MIS46_11125 PF07690 Major Facilitator Superfamily MIS46_11145 PF01406 tRNA synthetases class I (C) catalytic domain MIS46_11145 PF09190 DALR domain MIS46_11150 PF00958 GMP synthase C terminal domain MIS46_11150 PF00117 Glutamine amidotransferase class-I MIS46_11155 PF01235 Sodium:alanine symporter family MIS46_11160 PF04362 Bacterial Fe(2+) trafficking MIS46_11165 PF00550 Phosphopantetheine attachment site MIS46_11170 PF00109 Beta-ketoacyl synthase, N-terminal domain MIS46_11170 PF02801 Beta-ketoacyl synthase, C-terminal domain MIS46_11175 PF00224 Pyruvate kinase, barrel domain MIS46_11175 PF02887 Pyruvate kinase, alpha/beta domain MIS46_11185 PF00005 ABC transporter MIS46_11185 PF08402 TOBE domain MIS46_11190 PF02881 SRP54-type protein, helical bundle domain MIS46_11190 PF00448 SRP54-type protein, GTPase domain MIS46_11200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIS46_11205 PF00782 Dual specificity phosphatase, catalytic domain MIS46_11210 PF10576 Iron-sulfur binding domain of endonuclease III MIS46_11210 PF00633 Helix-hairpin-helix motif MIS46_11210 PF00730 HhH-GPD superfamily base excision DNA repair protein MIS46_11215 PF01165 Ribosomal protein S21 MIS46_11220 PF09424 Yqey-like protein MIS46_11225 PF00012 Hsp70 protein MIS46_11235 PF08245 Mur ligase middle domain MIS46_11235 PF01225 Mur ligase family, catalytic domain MIS46_11235 PF02875 Mur ligase family, glutamate ligase domain MIS46_11240 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIS46_11250 PF02592 Putative vitamin uptake transporter MIS46_11255 PF14489 QueF-like protein MIS46_11260 PF01018 GTP1/OBG MIS46_11260 PF01926 50S ribosome-binding GTPase MIS46_11270 PF04608 Phosphatidylglycerophosphatase A MIS46_11275 PF05958 tRNA (Uracil-5-)-methyltransferase MIS46_11290 PF03169 OPT oligopeptide transporter protein MIS46_11295 PF06940 Domain of unknown function (DUF1287) MIS46_11330 PF01212 Beta-eliminating lyase MIS46_11345 PF09186 Domain of unknown function (DUF1949) MIS46_11345 PF01205 Uncharacterized protein family UPF0029 MIS46_11365 PF02096 60Kd inner membrane protein MIS46_11365 PF14849 YidC periplasmic domain MIS46_11370 PF01809 Putative membrane protein insertion efficiency factor MIS46_11375 PF00825 Ribonuclease P MIS46_11380 PF00468 Ribosomal protein L34