WPG_0001 SM00382 ATPases associated with a variety of cellular activities WPG_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain WPG_0002 SM00226 Low molecular weight phosphatase family WPG_0010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WPG_0011 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WPG_0014 SM00271 DnaJ molecular chaperone homology domain WPG_0015 SM00448 cheY-homologous receiver domain WPG_0015 SM00850 LytTr DNA-binding domain WPG_0027 SM00562 WPG_0027 WPG_0032 SM00363 S4 RNA-binding domain WPG_0036 SM00422 helix_turn_helix, mercury resistance WPG_0041 SM00100 Cyclic nucleotide-monophosphate binding domain WPG_0041 SM00419 helix_turn_helix, cAMP Regulatory protein WPG_0052 SM00116 Domain in cystathionine beta-synthase and other proteins. WPG_0052 SM01240 WPG_0052 WPG_0053 SM01235 WPG_0053 WPG_0055 SM00752 Horizontally Transferred TransMembrane Domain WPG_0064 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins WPG_0067 SM00886 Stress responsive A/B Barrel Domain WPG_0069 SM01323 WPG_0069 WPG_0072 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WPG_0073 SM00382 ATPases associated with a variety of cellular activities WPG_0074 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. WPG_0075 SM00631 WPG_0075 WPG_0086 SM00563 Phosphate acyltransferases WPG_0124 SM00470 ParB-like nuclease domain WPG_0131 SM01160 WPG_0131 WPG_0132 SM00853 MutL C terminal dimerisation domain WPG_0132 SM01340 WPG_0132 WPG_0145 SM00382 ATPases associated with a variety of cellular activities WPG_0146 SM00028 Tetratricopeptide repeats WPG_0149 SM00341 Helicase and RNase D C-terminal WPG_0149 SM00487 DEAD-like helicases superfamily WPG_0149 SM00490 helicase superfamily c-terminal domain WPG_0149 SM00956 WPG_0149 WPG_0150 SM00116 Domain in cystathionine beta-synthase and other proteins. WPG_0153 SM00382 ATPases associated with a variety of cellular activities WPG_0171 SM00858 WPG_0171 WPG_0182 SM00382 ATPases associated with a variety of cellular activities WPG_0186 SM00984 UDP binding domain WPG_0190 SM00382 ATPases associated with a variety of cellular activities WPG_0192 SM00382 ATPases associated with a variety of cellular activities WPG_0196 SM00957 SecA DEAD-like domain WPG_0196 SM00958 SecA preprotein cross-linking domain WPG_0213 SM01259 WPG_0213 WPG_0215 SM00014 Acid phosphatase homologues WPG_0222 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. WPG_0237 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WPG_0246 SM00382 ATPases associated with a variety of cellular activities WPG_0253 SM00861 Transketolase, pyrimidine binding domain WPG_0262 SM00967 RNA 2'-O ribose methyltransferase substrate binding WPG_0267 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_0267 SM00954 Region found in RelA / SpoT proteins WPG_0269 SM00788 Adenylosuccinate synthetase WPG_0272 SM00028 Tetratricopeptide repeats WPG_0281 SM00732 Likely ribonuclease with RNase H fold. WPG_0292 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_0297 SM00382 ATPases associated with a variety of cellular activities WPG_0305 SM00028 Tetratricopeptide repeats WPG_0305 SM00342 helix_turn_helix, arabinose operon control protein WPG_0305 SM00387 Histidine kinase-like ATPases WPG_0305 SM00388 His Kinase A (phosphoacceptor) domain WPG_0305 SM00448 cheY-homologous receiver domain WPG_0307 SM00487 DEAD-like helicases superfamily WPG_0307 SM00490 helicase superfamily c-terminal domain WPG_0318 SM00245 tail specific protease WPG_0328 SM00382 ATPases associated with a variety of cellular activities WPG_0328 SM00448 cheY-homologous receiver domain WPG_0332 SM00382 ATPases associated with a variety of cellular activities WPG_0333 SM00271 DnaJ molecular chaperone homology domain WPG_0335 SM00867 YceI-like domain WPG_0344 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. WPG_0346 SM00871 Bacterial transcription activator, effector binding domain WPG_0352 SM00344 helix_turn_helix ASNC type WPG_0354 SM00487 DEAD-like helicases superfamily WPG_0362 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family WPG_0364 SM00937 WPG_0364 WPG_0370 SM01230 WPG_0370 WPG_0371 SM01230 WPG_0371 WPG_0393 SM00823 Phosphopantetheine attachment site WPG_0395 SM00248 ankyrin repeats WPG_0403 SM00028 Tetratricopeptide repeats WPG_0404 SM00028 Tetratricopeptide repeats WPG_0407 SM01080 WPG_0407 WPG_0409 SM00419 helix_turn_helix, cAMP Regulatory protein WPG_0413 SM00450 Rhodanese Homology Domain WPG_0413 SM00849 Metallo-beta-lactamase superfamily WPG_0426 SM00382 ATPases associated with a variety of cellular activities WPG_0430 SM00357 Cold shock protein domain WPG_0430 SM00382 ATPases associated with a variety of cellular activities WPG_0430 SM00959 Rho termination factor, N-terminal domain WPG_0432 SM00946 Prolyl-tRNA synthetase, C-terminal WPG_0435 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins WPG_0438 SM00840 WPG_0438 WPG_0439 SM01234 WPG_0439 WPG_0450 SM00248 ankyrin repeats WPG_0456 SM00387 Histidine kinase-like ATPases WPG_0456 SM00433 TopoisomeraseII WPG_0459 SM00245 tail specific protease WPG_0466 SM00421 helix_turn_helix, Lux Regulon WPG_0466 SM00448 cheY-homologous receiver domain WPG_0467 SM00387 Histidine kinase-like ATPases WPG_0474 SM00363 S4 RNA-binding domain WPG_0478 SM00342 helix_turn_helix, arabinose operon control protein WPG_0484 SM00382 ATPases associated with a variety of cellular activities WPG_0484 SM00962 SRP54-type protein, GTPase domain WPG_0484 SM00963 SRP54-type protein, helical bundle domain WPG_0491 SM00836 DALR anticodon binding domain WPG_0491 SM01016 Arginyl tRNA synthetase N terminal dom WPG_0493 SM00028 Tetratricopeptide repeats WPG_0493 SM00387 Histidine kinase-like ATPases WPG_0493 SM00388 His Kinase A (phosphoacceptor) domain WPG_0503 SM00382 ATPases associated with a variety of cellular activities WPG_0510 SM01192 WPG_0510 WPG_0510 SM01193 WPG_0510 WPG_0511 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain WPG_0514 SM00662 RNA polymerases D WPG_0515 SM00363 S4 RNA-binding domain WPG_0515 SM01390 WPG_0515 WPG_0529 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WPG_0530 SM01374 WPG_0530 WPG_0534 SM00322 K homology RNA-binding domain WPG_0537 SM01382 WPG_0537 WPG_0537 SM01383 WPG_0537 WPG_0541 SM01403 WPG_0541 WPG_0542 SM00838 Elongation factor G C-terminus WPG_0542 SM00889 Elongation factor G, domain IV WPG_0548 SM00967 RNA 2'-O ribose methyltransferase substrate binding WPG_0550 SM00382 ATPases associated with a variety of cellular activities WPG_0559 SM00645 Papain family cysteine protease WPG_0565 SM00646 WPG_0565 WPG_0572 SM00028 Tetratricopeptide repeats WPG_0573 SM01359 WPG_0573 WPG_0573 SM01360 WPG_0573 WPG_0583 SM01001 AIR carboxylase WPG_0602 SM00382 ATPases associated with a variety of cellular activities WPG_0606 SM00327 von Willebrand factor (vWF) type A domain WPG_0627 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WPG_0630 SM00341 Helicase and RNase D C-terminal WPG_0630 SM00382 ATPases associated with a variety of cellular activities WPG_0646 SM00421 helix_turn_helix, Lux Regulon WPG_0664 SM00047 Lysozyme subfamily 2 WPG_0664 SM00257 Lysin motif WPG_0671 SM00357 Cold shock protein domain WPG_0673 SM00861 Transketolase, pyrimidine binding domain WPG_0676 SM00344 helix_turn_helix ASNC type WPG_0691 SM00450 Rhodanese Homology Domain WPG_0699 SM00421 helix_turn_helix, Lux Regulon WPG_0699 SM00448 cheY-homologous receiver domain WPG_0700 SM00400 zinc finger WPG_0700 SM00493 WPG_0700 WPG_0722 SM00830 Chorismate mutase type II WPG_0726 SM00382 ATPases associated with a variety of cellular activities WPG_0750 SM00387 Histidine kinase-like ATPases WPG_0750 SM00388 His Kinase A (phosphoacceptor) domain WPG_0751 SM00448 cheY-homologous receiver domain WPG_0751 SM00862 Transcriptional regulatory protein, C terminal WPG_0757 SM00710 Parallel beta-helix repeats WPG_0765 SM00861 Transketolase, pyrimidine binding domain WPG_0766 SM00893 Electron transfer flavoprotein domain WPG_0767 SM00893 Electron transfer flavoprotein domain WPG_0778 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. WPG_0784 SM00354 helix_turn _helix lactose operon repressor WPG_0800 SM00421 helix_turn_helix, Lux Regulon WPG_0822 SM00858 WPG_0822 WPG_0834 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WPG_0834 SM00534 ATPase domain of DNA mismatch repair MUTS family WPG_0846 SM00382 ATPases associated with a variety of cellular activities WPG_0846 SM00994 ClpX C4-type zinc finger WPG_0846 SM01086 C-terminal, D2-small domain, of ClpB protein WPG_0858 SM00935 Outer membrane protein (OmpH-like) WPG_0859 SM00935 Outer membrane protein (OmpH-like) WPG_0863 SM00448 cheY-homologous receiver domain WPG_0863 SM00850 LytTr DNA-binding domain WPG_0864 SM00028 Tetratricopeptide repeats WPG_0869 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins WPG_0870 SM00932 Scaffold protein Nfu/NifU N terminal WPG_0879 SM00382 ATPases associated with a variety of cellular activities WPG_0897 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WPG_0898 SM00919 Malic enzyme, NAD binding domain WPG_0898 SM01274 WPG_0898 WPG_0902 SM00382 ATPases associated with a variety of cellular activities WPG_0914 SM00322 K homology RNA-binding domain WPG_0931 SM00387 Histidine kinase-like ATPases WPG_0932 SM00448 cheY-homologous receiver domain WPG_0942 SM00342 helix_turn_helix, arabinose operon control protein WPG_0942 SM00387 Histidine kinase-like ATPases WPG_0942 SM00388 His Kinase A (phosphoacceptor) domain WPG_0942 SM00448 cheY-homologous receiver domain WPG_0945 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs WPG_0945 SM00474 3'-5' exonuclease WPG_0945 SM00475 5'-3' exonuclease WPG_0945 SM00482 DNA polymerase A domain WPG_0956 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_0958 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_0960 SM00382 ATPases associated with a variety of cellular activities WPG_0988 SM00870 WPG_0988 WPG_0991 SM00421 helix_turn_helix, Lux Regulon WPG_0991 SM00448 cheY-homologous receiver domain WPG_0993 SM00861 Transketolase, pyrimidine binding domain WPG_1007 SM00357 Cold shock protein domain WPG_1011 SM00861 Transketolase, pyrimidine binding domain WPG_1013 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_1022 SM00448 cheY-homologous receiver domain WPG_1022 SM00850 LytTr DNA-binding domain WPG_1036 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WPG_1036 SM00245 tail specific protease WPG_1041 SM01018 B12 binding domain WPG_1055 SM00354 helix_turn _helix lactose operon repressor WPG_1061 SM00345 helix_turn_helix gluconate operon transcriptional repressor WPG_1061 SM00895 WPG_1061 WPG_1065 SM01350 WPG_1065 WPG_1074 SM01400 WPG_1074 WPG_1077 SM00904 Riboflavin kinase WPG_1078 SM00752 Horizontally Transferred TransMembrane Domain WPG_1080 SM00028 Tetratricopeptide repeats WPG_1083 SM00650 Ribosomal RNA adenine dimethylases WPG_1084 SM00116 Domain in cystathionine beta-synthase and other proteins. WPG_1084 SM00924 MgtE intracellular N domain WPG_1089 SM00421 helix_turn_helix, Lux Regulon WPG_1098 SM00563 Phosphate acyltransferases WPG_1103 SM00487 DEAD-like helicases superfamily WPG_1103 SM00490 helicase superfamily c-terminal domain WPG_1103 SM00982 WPG_1103 WPG_1103 SM01058 CarD-like/TRCF domain WPG_1116 SM00947 Carbonic anhydrase WPG_1120 SM00028 Tetratricopeptide repeats WPG_1120 SM00287 Bacterial SH3 domain homologues WPG_1122 SM00028 Tetratricopeptide repeats WPG_1124 SM00327 von Willebrand factor (vWF) type A domain WPG_1125 SM00327 von Willebrand factor (vWF) type A domain WPG_1147 SM01359 WPG_1147 WPG_1147 SM01360 WPG_1147 WPG_1148 SM00287 Bacterial SH3 domain homologues WPG_1165 SM00534 ATPase domain of DNA mismatch repair MUTS family WPG_1176 SM01011 Aminopeptidase P, N-terminal domain WPG_1189 SM00382 ATPases associated with a variety of cellular activities WPG_1199 SM00060 Fibronectin type 3 domain WPG_1204 SM01118 WPG_1204 WPG_1209 SM00358 Double-stranded RNA binding motif WPG_1209 SM00535 Ribonuclease III family WPG_1210 SM00825 Beta-ketoacyl synthase WPG_1235 SM00986 Uracil DNA glycosylase superfamily WPG_1235 SM00987 UreE urease accessory protein, C-terminal domain WPG_1240 SM01005 Alanine racemase, C-terminal domain WPG_1242 SM00859 Semialdehyde dehydrogenase, NAD binding domain WPG_1247 SM00060 Fibronectin type 3 domain WPG_1248 SM00382 ATPases associated with a variety of cellular activities WPG_1253 SM00878 Biotin carboxylase C-terminal domain WPG_1265 SM00382 ATPases associated with a variety of cellular activities WPG_1266 SM00100 Cyclic nucleotide-monophosphate binding domain WPG_1267 SM00028 Tetratricopeptide repeats WPG_1272 SM00354 helix_turn _helix lactose operon repressor WPG_1279 SM00448 cheY-homologous receiver domain WPG_1279 SM00850 LytTr DNA-binding domain WPG_1288 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WPG_1295 SM00421 helix_turn_helix, Lux Regulon WPG_1295 SM00448 cheY-homologous receiver domain WPG_1296 SM00387 Histidine kinase-like ATPases WPG_1300 SM00849 Metallo-beta-lactamase superfamily WPG_1304 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WPG_1304 SM00245 tail specific protease WPG_1311 SM00316 Ribosomal protein S1-like RNA-binding domain WPG_1311 SM00357 Cold shock protein domain WPG_1311 SM00955 WPG_1311 WPG_1317 SM00905 Dihydroneopterin aldolase WPG_1323 SM00244 prohibitin homologues WPG_1329 SM01228 WPG_1329 WPG_1331 SM00935 Outer membrane protein (OmpH-like) WPG_1334 SM00257 Lysin motif WPG_1359 SM01209 WPG_1359 WPG_1359 SM01210 WPG_1359 WPG_1371 SM00382 ATPases associated with a variety of cellular activities WPG_1387 SM00028 Tetratricopeptide repeats WPG_1395 SM00563 Phosphate acyltransferases WPG_1399 SM00382 ATPases associated with a variety of cellular activities WPG_1402 SM00450 Rhodanese Homology Domain WPG_1406 SM00882 Coenzyme A transferase WPG_1407 SM00882 Coenzyme A transferase WPG_1409 SM00382 ATPases associated with a variety of cellular activities WPG_1411 SM00060 Fibronectin type 3 domain WPG_1411 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) WPG_1411 SM00631 WPG_1411 WPG_1412 SM00060 Fibronectin type 3 domain WPG_1413 SM00060 Fibronectin type 3 domain WPG_1413 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) WPG_1419 SM00116 Domain in cystathionine beta-synthase and other proteins. WPG_1421 SM00448 cheY-homologous receiver domain WPG_1421 SM00862 Transcriptional regulatory protein, C terminal WPG_1422 SM00387 Histidine kinase-like ATPases WPG_1422 SM00388 His Kinase A (phosphoacceptor) domain WPG_1426 SM01004 Delta-aminolevulinic acid dehydratase WPG_1427 SM00487 DEAD-like helicases superfamily WPG_1432 SM00028 Tetratricopeptide repeats WPG_1440 SM00342 helix_turn_helix, arabinose operon control protein WPG_1447 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WPG_1447 SM00387 Histidine kinase-like ATPases WPG_1447 SM00388 His Kinase A (phosphoacceptor) domain WPG_1450 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_1452 SM00342 helix_turn_helix, arabinose operon control protein WPG_1454 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_1456 SM00563 Phosphate acyltransferases WPG_1458 SM00271 DnaJ molecular chaperone homology domain WPG_1464 SM00382 ATPases associated with a variety of cellular activities WPG_1467 SM00529 Helix-turn-helix diphteria tox regulatory element WPG_1467 SM00899 WPG_1467 WPG_1482 SM00116 Domain in cystathionine beta-synthase and other proteins. WPG_1491 SM00342 helix_turn_helix, arabinose operon control protein WPG_1508 SM00244 prohibitin homologues WPG_1510 SM00867 YceI-like domain WPG_1526 SM00342 helix_turn_helix, arabinose operon control protein WPG_1529 SM00072 Guanylate kinase homologues. WPG_1540 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WPG_1547 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. WPG_1548 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_1548 SM00876 Biotin and Thiamin Synthesis associated domain WPG_1551 SM00244 prohibitin homologues WPG_1553 SM00825 Beta-ketoacyl synthase WPG_1566 SM00481 DNA polymerase alpha chain like domain WPG_1568 SM00448 cheY-homologous receiver domain WPG_1568 SM00850 LytTr DNA-binding domain WPG_1573 SM00382 ATPases associated with a variety of cellular activities WPG_1585 SM00382 ATPases associated with a variety of cellular activities WPG_1594 SM00465 GIY-YIG type nucleases (URI domain) WPG_1606 SM01091 Transporter associated domain WPG_1608 SM00478 endonuclease III WPG_1609 SM00411 bacterial (prokaryotic) histone like domain WPG_1633 SM00996 S-adenosyl-L-homocysteine hydrolase WPG_1633 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WPG_1645 SM00387 Histidine kinase-like ATPases WPG_1645 SM00388 His Kinase A (phosphoacceptor) domain WPG_1646 SM00903 Flavin reductase like domain WPG_1663 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. WPG_1664 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WPG_1664 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WPG_1667 SM00344 helix_turn_helix ASNC type WPG_1681 SM00448 cheY-homologous receiver domain WPG_1681 SM00862 Transcriptional regulatory protein, C terminal WPG_1682 SM00387 Histidine kinase-like ATPases WPG_1682 SM00388 His Kinase A (phosphoacceptor) domain WPG_1698 SM00479 WPG_1698 WPG_1698 SM00481 DNA polymerase alpha chain like domain WPG_1705 SM00028 Tetratricopeptide repeats WPG_1705 SM00387 Histidine kinase-like ATPases WPG_1710 SM00028 Tetratricopeptide repeats WPG_1718 SM00365 Leucine-rich repeat, SDS22-like subfamily WPG_1718 SM00369 Leucine-rich repeats, typical (most populated) subfamily WPG_1719 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_1725 SM00448 cheY-homologous receiver domain WPG_1727 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WPG_1727 SM00091 PAS domain WPG_1727 SM00387 Histidine kinase-like ATPases WPG_1727 SM00388 His Kinase A (phosphoacceptor) domain WPG_1728 SM00897 FIST N domain WPG_1728 SM01204 WPG_1728 WPG_1729 SM00387 Histidine kinase-like ATPases WPG_1729 SM00388 His Kinase A (phosphoacceptor) domain WPG_1731 SM00448 cheY-homologous receiver domain WPG_1731 SM00850 LytTr DNA-binding domain WPG_1732 SM00448 cheY-homologous receiver domain WPG_1754 SM00782 PhnA Zinc-Ribbon WPG_1766 SM00642 Alpha-amylase domain WPG_1770 SM00354 helix_turn _helix lactose operon repressor WPG_1774 SM00642 Alpha-amylase domain WPG_1777 SM00642 Alpha-amylase domain WPG_1778 SM00642 Alpha-amylase domain WPG_1796 SM00363 S4 RNA-binding domain WPG_1797 SM00387 Histidine kinase-like ATPases WPG_1797 SM00388 His Kinase A (phosphoacceptor) domain WPG_1797 SM00448 cheY-homologous receiver domain WPG_1798 SM00460 Transglutaminase/protease-like homologues WPG_1804 SM00342 helix_turn_helix, arabinose operon control protein WPG_1822 SM00867 YceI-like domain WPG_1824 SM00342 helix_turn_helix, arabinose operon control protein WPG_1832 SM00450 Rhodanese Homology Domain WPG_1839 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WPG_1840 SM01092 CO dehydrogenase flavoprotein C-terminal domain WPG_1845 SM01130 WPG_1845 WPG_1846 SM00342 helix_turn_helix, arabinose operon control protein WPG_1853 SM01329 WPG_1853 WPG_1856 SM00938 Nitrogen regulatory protein P-II WPG_1867 SM00859 Semialdehyde dehydrogenase, NAD binding domain WPG_1879 SM00354 helix_turn _helix lactose operon repressor WPG_1898 SM00342 helix_turn_helix, arabinose operon control protein WPG_1904 SM00642 Alpha-amylase domain WPG_1909 SM00028 Tetratricopeptide repeats WPG_1912 SM01091 Transporter associated domain WPG_1924 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WPG_1924 SM00245 tail specific protease WPG_1939 SM00842 Cell division protein FtsA WPG_1940 SM00864 Tubulin/FtsZ family, GTPase domain WPG_1940 SM00865 Tubulin/FtsZ family, C-terminal domain WPG_1955 SM00382 ATPases associated with a variety of cellular activities WPG_1985 SM00316 Ribosomal protein S1-like RNA-binding domain WPG_1985 SM00322 K homology RNA-binding domain WPG_1986 SM01387 WPG_1986 WPG_2016 SM00900 WPG_2016 WPG_2029 SM00248 ankyrin repeats WPG_2052 SM00704 CDGSH-type zinc finger. Function unknown. WPG_2060 SM00028 Tetratricopeptide repeats WPG_2060 SM00387 Histidine kinase-like ATPases WPG_2060 SM00388 His Kinase A (phosphoacceptor) domain WPG_2060 SM00448 cheY-homologous receiver domain WPG_2061 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WPG_2062 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_2081 SM00268 Actin WPG_2084 SM00798 AICARFT/IMPCHase bienzyme WPG_2084 SM00851 MGS-like domain WPG_2096 SM00883 Chaperonin 10 Kd subunit WPG_2101 SM00382 ATPases associated with a variety of cellular activities WPG_2103 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_2106 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain WPG_2106 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WPG_2106 SM00493 WPG_2106 WPG_2114 SM00382 ATPases associated with a variety of cellular activities WPG_2119 SM00369 Leucine-rich repeats, typical (most populated) subfamily WPG_2144 SM00020 Trypsin-like serine protease WPG_2155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WPG_2155 SM00387 Histidine kinase-like ATPases WPG_2157 SM00850 LytTr DNA-binding domain WPG_2162 SM00448 cheY-homologous receiver domain WPG_2162 SM00850 LytTr DNA-binding domain WPG_2166 SM00382 ATPases associated with a variety of cellular activities WPG_2175 SM00530 Helix-turn-helix XRE-family like proteins WPG_2177 SM00342 helix_turn_helix, arabinose operon control protein WPG_2201 SM01022 WPG_2201 WPG_2221 SM00487 DEAD-like helicases superfamily WPG_2223 SM00530 Helix-turn-helix XRE-family like proteins WPG_2241 SM00422 helix_turn_helix, mercury resistance WPG_2243 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WPG_2248 SM00740 WPG_2248 WPG_2249 SM00363 S4 RNA-binding domain WPG_2254 SM00342 helix_turn_helix, arabinose operon control protein WPG_2255 SM00487 DEAD-like helicases superfamily WPG_2255 SM00490 helicase superfamily c-terminal domain WPG_2273 SM00450 Rhodanese Homology Domain WPG_2274 SM00450 Rhodanese Homology Domain WPG_2279 SM00387 Histidine kinase-like ATPases WPG_2280 SM00382 ATPases associated with a variety of cellular activities WPG_2280 SM00448 cheY-homologous receiver domain WPG_2282 SM00382 ATPases associated with a variety of cellular activities WPG_2291 SM00382 ATPases associated with a variety of cellular activities WPG_2309 SM01217 WPG_2309 WPG_2316 SM00342 helix_turn_helix, arabinose operon control protein WPG_2333 SM00850 LytTr DNA-binding domain WPG_2337 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain WPG_2341 SM00534 ATPase domain of DNA mismatch repair MUTS family WPG_2357 SM00342 helix_turn_helix, arabinose operon control protein WPG_2379 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WPG_2379 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WPG_2411 SM00382 ATPases associated with a variety of cellular activities WPG_2412 SM00710 Parallel beta-helix repeats WPG_2413 SM00028 Tetratricopeptide repeats WPG_2426 SM00897 FIST N domain WPG_2426 SM01204 WPG_2426 WPG_2427 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WPG_2427 SM00091 PAS domain WPG_2427 SM00387 Histidine kinase-like ATPases WPG_2427 SM00388 His Kinase A (phosphoacceptor) domain WPG_2427 SM00448 cheY-homologous receiver domain WPG_2438 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. WPG_2438 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WPG_2439 SM00649 Ribosomal protein L11/L12 WPG_2444 SM00663 RNA polymerase I subunit A N-terminus WPG_2450 SM00257 Lysin motif WPG_2464 SM00244 prohibitin homologues WPG_2479 SM00487 DEAD-like helicases superfamily WPG_2479 SM00490 helicase superfamily c-terminal domain WPG_2489 SM00850 LytTr DNA-binding domain WPG_2500 SM00191 Integrin alpha (beta-propellor repeats). WPG_2503 SM00493 WPG_2503 WPG_2513 SM00345 helix_turn_helix gluconate operon transcriptional repressor WPG_2518 SM00479 WPG_2518 WPG_2521 SM00852 Probable molybdopterin binding domain WPG_2525 SM00382 ATPases associated with a variety of cellular activities WPG_2525 SM00962 SRP54-type protein, GTPase domain WPG_2525 SM00963 SRP54-type protein, helical bundle domain WPG_2528 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_2534 SM00631 WPG_2534 WPG_2541 SM00257 Lysin motif WPG_2560 SM00347 helix_turn_helix multiple antibiotic resistance protein WPG_2563 SM01211 WPG_2563 WPG_2582 SM00382 ATPases associated with a variety of cellular activities WPG_2590 SM00729 Elongator protein 3, MiaB family, Radical SAM WPG_2596 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WPG_2596 SM01209 WPG_2596 WPG_2603 SM00382 ATPases associated with a variety of cellular activities WPG_2608 SM00245 tail specific protease WPG_2616 SM01235 WPG_2616 WPG_2621 SM00530 Helix-turn-helix XRE-family like proteins WPG_2626 SM00487 DEAD-like helicases superfamily WPG_2626 SM00490 helicase superfamily c-terminal domain WPG_2640 SM00448 cheY-homologous receiver domain WPG_2640 SM00850 LytTr DNA-binding domain WPG_2641 SM00028 Tetratricopeptide repeats WPG_2643 SM00421 helix_turn_helix, Lux Regulon WPG_2643 SM00448 cheY-homologous receiver domain WPG_2644 SM00028 Tetratricopeptide repeats WPG_2644 SM00387 Histidine kinase-like ATPases WPG_2653 SM00487 DEAD-like helicases superfamily WPG_2653 SM00490 helicase superfamily c-terminal domain WPG_2654 SM00448 cheY-homologous receiver domain WPG_2654 SM00850 LytTr DNA-binding domain WPG_2663 SM00560 LamG-like jellyroll fold domain WPG_2664 SM00137 Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others) WPG_2664 SM00560 LamG-like jellyroll fold domain WPG_2672 SM00411 bacterial (prokaryotic) histone like domain WPG_2674 SM00487 DEAD-like helicases superfamily WPG_2674 SM00490 helicase superfamily c-terminal domain WPG_2705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WPG_2732 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WPG_2741 SM00843 WPG_2741 WPG_2745 SM00873 B3/4 domain WPG_2745 SM00874 tRNA synthetase B5 domain WPG_2745 SM00896 Ferredoxin-fold anticodon binding domain WPG_2751 SM00530 Helix-turn-helix XRE-family like proteins WPG_2755 SM00028 Tetratricopeptide repeats WPG_2756 SM00487 DEAD-like helicases superfamily WPG_2756 SM00490 helicase superfamily c-terminal domain WPG_2757 SM00060 Fibronectin type 3 domain WPG_2772 SM00382 ATPases associated with a variety of cellular activities WPG_2775 SM00878 Biotin carboxylase C-terminal domain WPG_2809 SM00833 Cobalamin synthesis protein cobW C-terminal domain WPG_2812 SM00382 ATPases associated with a variety of cellular activities WPG_2818 SM00981 WPG_2818 WPG_2820 SM00448 cheY-homologous receiver domain WPG_2820 SM00850 LytTr DNA-binding domain WPG_2829 SM00342 helix_turn_helix, arabinose operon control protein WPG_2830 SM00861 Transketolase, pyrimidine binding domain WPG_2843 SM00245 tail specific protease WPG_2853 SM00480 DNA polymerase III beta subunit WPG_2861 SM00028 Tetratricopeptide repeats WPG_2882 SM00322 K homology RNA-binding domain WPG_2882 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_2893 SM00642 Alpha-amylase domain WPG_2895 SM00642 Alpha-amylase domain WPG_2905 SM00382 ATPases associated with a variety of cellular activities WPG_2905 SM00464 Found in ATP-dependent protease La (LON) WPG_2906 SM00257 Lysin motif WPG_2909 SM00257 Lysin motif WPG_2911 SM00316 Ribosomal protein S1-like RNA-binding domain WPG_2931 SM00382 ATPases associated with a variety of cellular activities WPG_2940 SM01059 Chloramphenicol acetyltransferase WPG_2942 SM00563 Phosphate acyltransferases WPG_2964 SM00937 WPG_2964 WPG_2979 SM00860 SMI1 / KNR4 family WPG_2990 SM00478 endonuclease III WPG_2993 SM00849 Metallo-beta-lactamase superfamily WPG_3008 SM00646 WPG_3008 WPG_3023 SM00342 helix_turn_helix, arabinose operon control protein WPG_3033 SM00028 Tetratricopeptide repeats WPG_3049 SM00631 WPG_3049 WPG_3053 SM00450 Rhodanese Homology Domain WPG_3056 SM01154 WPG_3056 WPG_3058 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WPG_3058 SM00534 ATPase domain of DNA mismatch repair MUTS family WPG_3059 SM00986 Uracil DNA glycosylase superfamily WPG_3059 SM00987 UreE urease accessory protein, C-terminal domain WPG_3065 SM00861 Transketolase, pyrimidine binding domain WPG_3072 SM00487 DEAD-like helicases superfamily WPG_3072 SM00490 helicase superfamily c-terminal domain WPG_3077 SM00487 DEAD-like helicases superfamily WPG_3077 SM00490 helicase superfamily c-terminal domain WPG_3082 SM00867 YceI-like domain WPG_3083 SM00862 Transcriptional regulatory protein, C terminal WPG_3105 SM00382 ATPases associated with a variety of cellular activities WPG_3107 SM00028 Tetratricopeptide repeats WPG_3107 SM00342 helix_turn_helix, arabinose operon control protein WPG_3108 SM00248 ankyrin repeats WPG_3113 SM00829 Enoylreductase WPG_3131 SM00421 helix_turn_helix, Lux Regulon WPG_3131 SM00448 cheY-homologous receiver domain WPG_3132 SM00028 Tetratricopeptide repeats WPG_3132 SM00387 Histidine kinase-like ATPases WPG_3149 SM00448 cheY-homologous receiver domain WPG_3149 SM00850 LytTr DNA-binding domain WPG_3160 SM00487 DEAD-like helicases superfamily WPG_3160 SM00490 helicase superfamily c-terminal domain WPG_3161 SM00257 Lysin motif WPG_3162 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain WPG_3162 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WPG_3164 SM00871 Bacterial transcription activator, effector binding domain WPG_3166 SM00357 Cold shock protein domain WPG_3197 SM00244 prohibitin homologues WPG_3199 SM00822 WPG_3199 WPG_3200 SM00881 CoA binding domain WPG_3203 SM00841 Elongation factor P, C-terminal WPG_3203 SM01185 WPG_3203 WPG_3207 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_3208 SM00448 cheY-homologous receiver domain WPG_3212 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WPG_3212 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WPG_3215 SM00984 UDP binding domain WPG_3218 SM00635 Bacterial Ig-like domain 2 WPG_3237 SM00344 helix_turn_helix ASNC type WPG_3238 SM00631 WPG_3238 WPG_3244 SM00434 DNA Topoisomerase IV WPG_3246 SM00387 Histidine kinase-like ATPases WPG_3246 SM00433 TopoisomeraseII WPG_3268 SM00382 ATPases associated with a variety of cellular activities WPG_3290 SM00382 ATPases associated with a variety of cellular activities WPG_3296 SM00347 helix_turn_helix multiple antibiotic resistance protein WPG_3304 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WPG_3315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WPG_3318 SM00028 Tetratricopeptide repeats WPG_3319 SM00434 DNA Topoisomerase IV WPG_3320 SM00382 ATPases associated with a variety of cellular activities WPG_3320 SM01086 C-terminal, D2-small domain, of ClpB protein WPG_3335 SM00327 von Willebrand factor (vWF) type A domain WPG_3338 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain WPG_3355 SM00028 Tetratricopeptide repeats WPG_3370 SM00849 Metallo-beta-lactamase superfamily WPG_3388 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase WPG_3399 SM01021 Bacteriorhodopsin-like protein WPG_3410 SM00797 Allophanate hydrolase subunit 2 WPG_3411 SM00796 Allophanate hydrolase subunit 1 WPG_3416 SM00382 ATPases associated with a variety of cellular activities WPG_3420 SM00977 TilS substrate C-terminal domain WPG_3424 SM00487 DEAD-like helicases superfamily WPG_3424 SM00490 helicase superfamily c-terminal domain WPG_3429 SM00028 Tetratricopeptide repeats WPG_3434 SM00448 cheY-homologous receiver domain WPG_3434 SM00850 LytTr DNA-binding domain WPG_3442 SM00344 helix_turn_helix ASNC type WPG_3449 SM00382 ATPases associated with a variety of cellular activities WPG_3463 SM00448 cheY-homologous receiver domain WPG_3463 SM00850 LytTr DNA-binding domain WPG_3468 SM00560 LamG-like jellyroll fold domain WPG_3471 SM00028 Tetratricopeptide repeats WPG_3476 SM00382 ATPases associated with a variety of cellular activities WPG_3476 SM01086 C-terminal, D2-small domain, of ClpB protein WPG_3480 SM01133 WPG_3480 WPG_3486 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain WPG_3493 SM00465 GIY-YIG type nucleases (URI domain) WPG_3493 SM00479 WPG_3493 WPG_3497 SM00448 cheY-homologous receiver domain WPG_3497 SM00862 Transcriptional regulatory protein, C terminal WPG_3498 SM00387 Histidine kinase-like ATPases WPG_3498 SM00388 His Kinase A (phosphoacceptor) domain WPG_3503 SM00060 Fibronectin type 3 domain WPG_3509 SM01409 WPG_3509 WPG_3511 SM01130 WPG_3511 WPG_3517 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WPG_3517 SM00292 breast cancer carboxy-terminal domain WPG_3517 SM00532 Ligase N family