locus-tag class description L1L77_00005 PF00308 Bacterial dnaA protein L1L77_00005 PF08299 Bacterial dnaA protein helix-turn-helix L1L77_00005 PF11638 DnaA N-terminal domain L1L77_00020 PF00925 GTP cyclohydrolase II L1L77_00025 PF04335 VirB8 protein L1L77_00040 PF00437 Type II/IV secretion system protein L1L77_00045 PF02534 Type IV secretory system Conjugative DNA transfer L1L77_00055 PF13847 Methyltransferase domain L1L77_00055 PF17827 PrmC N-terminal domain L1L77_00065 PF00164 Ribosomal protein S12/S23 L1L77_00070 PF00177 Ribosomal protein S7p/S5e L1L77_00075 PF00009 Elongation factor Tu GTP binding domain L1L77_00075 PF03764 Elongation factor G, domain IV L1L77_00075 PF03144 Elongation factor Tu domain 2 L1L77_00075 PF00679 Elongation factor G C-terminus L1L77_00075 PF14492 Elongation Factor G, domain II L1L77_00080 PF00009 Elongation factor Tu GTP binding domain L1L77_00080 PF03144 Elongation factor Tu domain 2 L1L77_00080 PF03143 Elongation factor Tu C-terminal domain L1L77_00095 PF00467 KOW motif L1L77_00095 PF02357 Transcription termination factor nusG L1L77_00100 PF03946 Ribosomal protein L11, N-terminal domain L1L77_00100 PF00298 Ribosomal protein L11, RNA binding domain L1L77_00105 PF00687 Ribosomal protein L1p/L10e family L1L77_00110 PF00466 Ribosomal protein L10 L1L77_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain L1L77_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain L1L77_00120 PF04565 RNA polymerase Rpb2, domain 3 L1L77_00120 PF04560 RNA polymerase Rpb2, domain 7 L1L77_00120 PF00562 RNA polymerase Rpb2, domain 6 L1L77_00120 PF10385 RNA polymerase beta subunit external 1 domain L1L77_00120 PF04561 RNA polymerase Rpb2, domain 2 L1L77_00120 PF04983 RNA polymerase Rpb1, domain 3 L1L77_00120 PF04998 RNA polymerase Rpb1, domain 5 L1L77_00120 PF05000 RNA polymerase Rpb1, domain 4 L1L77_00120 PF04563 RNA polymerase beta subunit L1L77_00120 PF00623 RNA polymerase Rpb1, domain 2 L1L77_00120 PF04997 RNA polymerase Rpb1, domain 1 L1L77_00125 PF01207 Dihydrouridine synthase (Dus) L1L77_00145 PF02403 Seryl-tRNA synthetase N-terminal domain L1L77_00145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1L77_00150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L1L77_00150 PF02843 Phosphoribosylglycinamide synthetase, C domain L1L77_00150 PF02844 Phosphoribosylglycinamide synthetase, N domain L1L77_00175 PF14572 Phosphoribosyl synthetase-associated domain L1L77_00175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L1L77_00180 PF02686 Glu-tRNAGln amidotransferase C subunit L1L77_00185 PF07676 WD40-like Beta Propeller Repeat L1L77_00185 PF04052 TolB amino-terminal domain L1L77_00190 PF12706 Beta-lactamase superfamily domain L1L77_00190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L1L77_00190 PF17770 Ribonuclease J C-terminal domain L1L77_00195 PF00226 DnaJ domain L1L77_00195 PF01556 DnaJ C terminal domain L1L77_00195 PF00684 DnaJ central domain L1L77_00255 PF00883 Cytosol aminopeptidase family, catalytic domain L1L77_00255 PF02789 Cytosol aminopeptidase family, N-terminal domain L1L77_00265 PF00216 Bacterial DNA-binding protein L1L77_00275 PF01551 Peptidase family M23 L1L77_00280 PF13603 Leucyl-tRNA synthetase, Domain 2 L1L77_00280 PF09334 tRNA synthetases class I (M) L1L77_00280 PF08264 Anticodon-binding domain of tRNA L1L77_00280 PF00133 tRNA synthetases class I (I, L, M and V) L1L77_00290 PF13276 HTH-like domain L1L77_00290 PF00665 Integrase core domain L1L77_00290 PF13333 Integrase core domain L1L77_00295 PF13276 HTH-like domain L1L77_00295 PF00665 Integrase core domain L1L77_00295 PF13333 Integrase core domain L1L77_00310 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L1L77_00320 PF00380 Ribosomal protein S9/S16 L1L77_00325 PF00572 Ribosomal protein L13 L1L77_00335 PF10691 Protein of unknown function (DUF2497) L1L77_00340 PF01728 FtsJ-like methyltransferase L1L77_00375 PF13276 HTH-like domain L1L77_00375 PF13333 Integrase core domain L1L77_00375 PF00665 Integrase core domain L1L77_00380 PF13276 HTH-like domain L1L77_00380 PF00665 Integrase core domain L1L77_00380 PF13333 Integrase core domain L1L77_00410 PF02355 Protein export membrane protein L1L77_00430 PF00571 CBS domain L1L77_00430 PF00478 IMP dehydrogenase / GMP reductase domain L1L77_00435 PF00398 Ribosomal RNA adenine dimethylase L1L77_00445 PF00121 Triosephosphate isomerase L1L77_00450 PF02481 DNA recombination-mediator protein A L1L77_00450 PF17782 DprA winged helix domain L1L77_00455 PF00037 4Fe-4S binding domain L1L77_00455 PF11953 Domain of unknown function (DUF3470) L1L77_00465 PF01820 D-ala D-ala ligase N-terminus L1L77_00465 PF07478 D-ala D-ala ligase C-terminus L1L77_00470 PF03799 Cell division protein FtsQ L1L77_00470 PF08478 POTRA domain, FtsQ-type L1L77_00475 PF07943 Penicillin-binding protein 5, C-terminal domain L1L77_00475 PF00768 D-alanyl-D-alanine carboxypeptidase L1L77_00480 PF00893 Small Multidrug Resistance protein L1L77_00485 PF00893 Small Multidrug Resistance protein L1L77_00495 PF14850 DNA-binding domain of Proline dehydrogenase L1L77_00495 PF00171 Aldehyde dehydrogenase family L1L77_00495 PF01619 Proline dehydrogenase L1L77_00495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain L1L77_00500 PF00694 Aconitase C-terminal domain L1L77_00500 PF00330 Aconitase family (aconitate hydratase) L1L77_00505 PF02556 Preprotein translocase subunit SecB L1L77_00515 PF00929 Exonuclease L1L77_00520 PF02630 SCO1/SenC L1L77_00530 PF01751 Toprim domain L1L77_00530 PF00986 DNA gyrase B subunit, carboxyl terminus L1L77_00530 PF00204 DNA gyrase B L1L77_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1L77_00545 PF13276 HTH-like domain L1L77_00545 PF00665 Integrase core domain L1L77_00545 PF13333 Integrase core domain L1L77_00555 PF01609 Transposase DDE domain L1L77_00560 PF04551 GcpE protein L1L77_00575 PF09397 Ftsk gamma domain L1L77_00575 PF01580 FtsK/SpoIIIE family L1L77_00575 PF17854 FtsK alpha domain L1L77_00575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L1L77_00580 PF02325 YGGT family L1L77_00630 PF00677 Lumazine binding domain L1L77_00640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L1L77_00640 PF01409 tRNA synthetases class II core domain (F) L1L77_00645 PF00132 Bacterial transferase hexapeptide (six repeats) L1L77_00645 PF14602 Hexapeptide repeat of succinyl-transferase L1L77_00645 PF12804 MobA-like NTP transferase domain L1L77_00650 PF00829 Ribosomal prokaryotic L21 protein L1L77_00655 PF01016 Ribosomal L27 protein L1L77_00665 PF00438 S-adenosylmethionine synthetase, N-terminal domain L1L77_00665 PF02773 S-adenosylmethionine synthetase, C-terminal domain L1L77_00665 PF02772 S-adenosylmethionine synthetase, central domain L1L77_00675 PF03070 TENA/THI-4/PQQC family L1L77_00685 PF00510 Cytochrome c oxidase subunit III L1L77_00690 PF02075 Crossover junction endodeoxyribonuclease RuvC L1L77_00695 PF03652 Holliday junction resolvase L1L77_00705 PF02637 GatB domain L1L77_00705 PF02934 GatB/GatE catalytic domain L1L77_00720 PF01406 tRNA synthetases class I (C) catalytic domain L1L77_00720 PF09190 DALR domain L1L77_00725 PF06055 Exopolysaccharide synthesis, ExoD L1L77_00735 PF02416 mttA/Hcf106 family L1L77_00740 PF08402 TOBE domain L1L77_00740 PF00005 ABC transporter L1L77_00750 PF01541 GIY-YIG catalytic domain L1L77_00750 PF02151 UvrB/uvrC motif L1L77_00750 PF08459 UvrC Helix-hairpin-helix N-terminal L1L77_00755 PF05746 DALR anticodon binding domain L1L77_00755 PF02092 Glycyl-tRNA synthetase beta subunit L1L77_00760 PF02091 Glycyl-tRNA synthetase alpha subunit L1L77_00770 PF00490 Delta-aminolevulinic acid dehydratase L1L77_00775 PF00146 NADH dehydrogenase L1L77_00780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L1L77_00780 PF00384 Molybdopterin oxidoreductase L1L77_00780 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal L1L77_00795 PF03167 Uracil DNA glycosylase superfamily L1L77_00800 PF01327 Polypeptide deformylase L1L77_00805 PF02491 SHS2 domain inserted in FTSA L1L77_00810 PF00557 Metallopeptidase family M24 L1L77_00815 PF07690 Major Facilitator Superfamily L1L77_00815 PF00083 Sugar (and other) transporter L1L77_00820 PF01795 MraW methylase family L1L77_00835 PF14693 Ribosomal protein TL5, C-terminal domain L1L77_00835 PF01386 Ribosomal L25p family L1L77_00840 PF01195 Peptidyl-tRNA hydrolase L1L77_00850 PF01494 FAD binding domain L1L77_00860 PF10609 NUBPL iron-transfer P-loop NTPase L1L77_00885 PF13333 Integrase core domain L1L77_00885 PF00665 Integrase core domain L1L77_00885 PF13276 HTH-like domain L1L77_00890 PF13333 Integrase core domain L1L77_00890 PF00665 Integrase core domain L1L77_00890 PF13276 HTH-like domain L1L77_00905 PF01121 Dephospho-CoA kinase L1L77_00910 PF00570 HRDC domain L1L77_00910 PF01612 3'-5' exonuclease L1L77_00915 PF05192 MutS domain III L1L77_00915 PF01624 MutS domain I L1L77_00915 PF05188 MutS domain II L1L77_00915 PF05190 MutS family domain IV L1L77_00915 PF00488 MutS domain V L1L77_00930 PF00571 CBS domain L1L77_00930 PF03471 Transporter associated domain L1L77_00930 PF03741 Integral membrane protein TerC family L1L77_00935 PF00117 Glutamine amidotransferase class-I L1L77_00935 PF00958 GMP synthase C terminal domain L1L77_00935 PF02540 NAD synthase L1L77_00940 PF03477 ATP cone domain L1L77_00940 PF02867 Ribonucleotide reductase, barrel domain L1L77_00940 PF00317 Ribonucleotide reductase, all-alpha domain L1L77_00945 PF01209 ubiE/COQ5 methyltransferase family L1L77_00970 PF00468 Ribosomal protein L34 L1L77_00975 PF00528 Binding-protein-dependent transport system inner membrane component L1L77_00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1L77_00980 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1L77_00985 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L1L77_01010 PF00596 Class II Aldolase and Adducin N-terminal domain L1L77_01020 PF00814 Glycoprotease family L1L77_01030 PF00268 Ribonucleotide reductase, small chain L1L77_01055 PF17761 DUF1016 N-terminal domain L1L77_01055 PF06250 YhcG PDDEXK nuclease domain L1L77_01065 PF11967 Recombination protein O N terminal L1L77_01065 PF02565 Recombination protein O C terminal L1L77_01075 PF00990 Diguanylate cyclase, GGDEF domain L1L77_01075 PF00072 Response regulator receiver domain L1L77_01085 PF05088 Bacterial NAD-glutamate dehydrogenase L1L77_01090 PF07724 AAA domain (Cdc48 subfamily) L1L77_01090 PF02861 Clp amino terminal domain, pathogenicity island component L1L77_01090 PF10431 C-terminal, D2-small domain, of ClpB protein L1L77_01090 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_01090 PF17871 AAA lid domain L1L77_01105 PF00679 Elongation factor G C-terminus L1L77_01105 PF00009 Elongation factor Tu GTP binding domain L1L77_01105 PF03144 Elongation factor Tu domain 2 L1L77_01110 PF00156 Phosphoribosyl transferase domain L1L77_01115 PF00375 Sodium:dicarboxylate symporter family L1L77_01120 PF01979 Amidohydrolase family L1L77_01135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L1L77_01135 PF01578 Cytochrome C assembly protein L1L77_01150 PF07549 SecD/SecF GG Motif L1L77_01150 PF02355 Protein export membrane protein L1L77_01160 PF02096 60Kd inner membrane protein L1L77_01160 PF14849 YidC periplasmic domain L1L77_01165 PF00885 6,7-dimethyl-8-ribityllumazine synthase L1L77_01170 PF01029 NusB family L1L77_01200 PF00692 dUTPase L1L77_01205 PF00696 Amino acid kinase family L1L77_01210 PF01926 50S ribosome-binding GTPase L1L77_01215 PF03462 PCRF domain L1L77_01215 PF00472 RF-1 domain L1L77_01220 PF07690 Major Facilitator Superfamily L1L77_01245 PF02646 RmuC family L1L77_01250 PF01609 Transposase DDE domain L1L77_01255 PF00872 Transposase, Mutator family L1L77_01265 PF08671 Anti-repressor SinI L1L77_01265 PF01381 Helix-turn-helix L1L77_01275 PF04002 RadC-like JAB domain L1L77_01280 PF01348 Type II intron maturase L1L77_01280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_01305 PF18755 Restriction Enzyme Adenine Methylase Associated L1L77_01305 PF01555 DNA methylase L1L77_01350 PF02371 Transposase IS116/IS110/IS902 family L1L77_01350 PF01548 Transposase L1L77_01425 PF00239 Resolvase, N terminal domain L1L77_01425 PF02796 Helix-turn-helix domain of resolvase L1L77_01465 PF01527 Transposase L1L77_01475 PF13276 HTH-like domain L1L77_01475 PF00665 Integrase core domain L1L77_01475 PF13333 Integrase core domain L1L77_01480 PF13276 HTH-like domain L1L77_01480 PF00665 Integrase core domain L1L77_01480 PF13333 Integrase core domain L1L77_01485 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L1L77_01485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L1L77_01490 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1L77_01495 PF01040 UbiA prenyltransferase family L1L77_01500 PF00075 RNase H L1L77_01510 PF00118 TCP-1/cpn60 chaperonin family L1L77_01515 PF00166 Chaperonin 10 Kd subunit L1L77_01520 PF01571 Aminomethyltransferase folate-binding domain L1L77_01525 PF01368 DHH family L1L77_01525 PF17768 RecJ OB domain L1L77_01525 PF02272 DHHA1 domain L1L77_01540 PF00115 Cytochrome C and Quinol oxidase polypeptide I L1L77_01550 PF05362 Lon protease (S16) C-terminal proteolytic domain L1L77_01550 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_01550 PF02190 ATP-dependent protease La (LON) substrate-binding domain L1L77_01555 PF07724 AAA domain (Cdc48 subfamily) L1L77_01555 PF10431 C-terminal, D2-small domain, of ClpB protein L1L77_01555 PF06689 ClpX C4-type zinc finger L1L77_01560 PF00574 Clp protease L1L77_01565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L1L77_01565 PF05698 Bacterial trigger factor protein (TF) C-terminus L1L77_01565 PF05697 Bacterial trigger factor protein (TF) L1L77_01575 PF04972 BON domain L1L77_01580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain L1L77_01580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain L1L77_01585 PF04101 Glycosyltransferase family 28 C-terminal domain L1L77_01585 PF03033 Glycosyltransferase family 28 N-terminal domain L1L77_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_01595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1L77_01600 PF01548 Transposase L1L77_01600 PF02371 Transposase IS116/IS110/IS902 family L1L77_01630 PF01235 Sodium:alanine symporter family L1L77_01645 PF02545 Maf-like protein L1L77_01650 PF01176 Translation initiation factor 1A / IF-1 L1L77_01665 PF00709 Adenylosuccinate synthetase L1L77_01685 PF01578 Cytochrome C assembly protein L1L77_01690 PF03618 Kinase/pyrophosphorylase L1L77_01695 PF00444 Ribosomal protein L36 L1L77_01715 PF13276 HTH-like domain L1L77_01715 PF00665 Integrase core domain L1L77_01715 PF13333 Integrase core domain L1L77_01720 PF13276 HTH-like domain L1L77_01720 PF00665 Integrase core domain L1L77_01720 PF13333 Integrase core domain L1L77_01725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1L77_01730 PF02661 Fic/DOC family L1L77_01730 PF13784 Fic/DOC family N-terminal L1L77_01735 PF13662 Toprim domain L1L77_01735 PF08275 DNA primase catalytic core, N-terminal domain L1L77_01735 PF01807 CHC2 zinc finger L1L77_01745 PF08241 Methyltransferase domain L1L77_01755 PF08264 Anticodon-binding domain of tRNA L1L77_01755 PF09334 tRNA synthetases class I (M) L1L77_01765 PF03796 DnaB-like helicase C terminal domain L1L77_01765 PF00772 DnaB-like helicase N terminal domain L1L77_01775 PF06271 RDD family L1L77_01780 PF04002 RadC-like JAB domain L1L77_01790 PF12705 PD-(D/E)XK nuclease superfamily L1L77_01790 PF00580 UvrD/REP helicase N-terminal domain L1L77_01790 PF13361 UvrD-like helicase C-terminal domain L1L77_01795 PF08544 GHMP kinases C terminal L1L77_01795 PF00288 GHMP kinases N terminal domain L1L77_01805 PF00950 ABC 3 transport family L1L77_01830 PF05173 Dihydrodipicolinate reductase, C-terminus L1L77_01830 PF01113 Dihydrodipicolinate reductase, N-terminus L1L77_01835 PF00005 ABC transporter L1L77_01850 PF13276 HTH-like domain L1L77_01850 PF00665 Integrase core domain L1L77_01850 PF13333 Integrase core domain L1L77_01855 PF13276 HTH-like domain L1L77_01855 PF00665 Integrase core domain L1L77_01855 PF13333 Integrase core domain L1L77_01865 PF01769 Divalent cation transporter L1L77_01865 PF03448 MgtE intracellular N domain L1L77_01865 PF00571 CBS domain L1L77_01870 PF02386 Cation transport protein L1L77_01875 PF02386 Cation transport protein L1L77_01890 PF00692 dUTPase L1L77_01915 PF07690 Major Facilitator Superfamily L1L77_01930 PF02779 Transketolase, pyrimidine binding domain L1L77_01930 PF00456 Transketolase, thiamine diphosphate binding domain L1L77_01930 PF02780 Transketolase, C-terminal domain L1L77_01935 PF00163 Ribosomal protein S4/S9 N-terminal domain L1L77_01935 PF01479 S4 domain L1L77_01945 PF04384 Iron-sulphur cluster assembly L1L77_01955 PF00830 Ribosomal L28 family L1L77_01960 PF04055 Radical SAM superfamily L1L77_01960 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L1L77_01965 PF01209 ubiE/COQ5 methyltransferase family L1L77_01970 PF01098 Cell cycle protein L1L77_01985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_02000 PF00664 ABC transporter transmembrane region L1L77_02000 PF00005 ABC transporter L1L77_02010 PF05746 DALR anticodon binding domain L1L77_02010 PF00750 tRNA synthetases class I (R) L1L77_02010 PF03485 Arginyl tRNA synthetase N terminal domain L1L77_02040 PF00005 ABC transporter L1L77_02050 PF00152 tRNA synthetases class II (D, K and N) L1L77_02050 PF02938 GAD domain L1L77_02050 PF01336 OB-fold nucleic acid binding domain L1L77_02055 PF08946 Osmosensory transporter coiled coil L1L77_02055 PF00083 Sugar (and other) transporter L1L77_02060 PF00849 RNA pseudouridylate synthase L1L77_02060 PF01479 S4 domain L1L77_02065 PF00676 Dehydrogenase E1 component L1L77_02070 PF03653 Uncharacterised protein family (UPF0093) L1L77_02080 PF00919 Uncharacterized protein family UPF0004 L1L77_02080 PF04055 Radical SAM superfamily L1L77_02080 PF01938 TRAM domain L1L77_02090 PF00854 POT family L1L77_02095 PF00133 tRNA synthetases class I (I, L, M and V) L1L77_02095 PF08264 Anticodon-binding domain of tRNA L1L77_02105 PF03483 B3/4 domain L1L77_02105 PF03147 Ferredoxin-fold anticodon binding domain L1L77_02105 PF01588 Putative tRNA binding domain L1L77_02105 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L1L77_02105 PF03484 tRNA synthetase B5 domain L1L77_02115 PF00119 ATP synthase A chain L1L77_02120 PF00137 ATP synthase subunit C L1L77_02140 PF02628 Cytochrome oxidase assembly protein L1L77_02145 PF00289 Biotin carboxylase, N-terminal domain L1L77_02145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1L77_02145 PF18140 Propionyl-coenzyme A carboxylase BT domain L1L77_02145 PF02785 Biotin carboxylase C-terminal domain L1L77_02145 PF00364 Biotin-requiring enzyme L1L77_02155 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1L77_02160 PF00890 FAD binding domain L1L77_02160 PF02910 Fumarate reductase flavoprotein C-term L1L77_02170 PF00625 Guanylate kinase L1L77_02190 PF01926 50S ribosome-binding GTPase L1L77_02190 PF06071 Protein of unknown function (DUF933) L1L77_02200 PF01743 Poly A polymerase head domain L1L77_02200 PF12627 Probable RNA and SrmB- binding site of polymerase A L1L77_02200 PF13735 tRNA nucleotidyltransferase domain 2 putative L1L77_02225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L1L77_02225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L1L77_02230 PF00902 Sec-independent protein translocase protein (TatC) L1L77_02235 PF01316 Arginine repressor, DNA binding domain L1L77_02235 PF02863 Arginine repressor, C-terminal domain L1L77_02240 PF00497 Bacterial extracellular solute-binding proteins, family 3 L1L77_02245 PF00528 Binding-protein-dependent transport system inner membrane component L1L77_02250 PF00005 ABC transporter L1L77_02275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L1L77_02290 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_02290 PF17862 AAA+ lid domain L1L77_02290 PF06480 FtsH Extracellular L1L77_02290 PF01434 Peptidase family M41 L1L77_02295 PF00133 tRNA synthetases class I (I, L, M and V) L1L77_02295 PF08264 Anticodon-binding domain of tRNA L1L77_02315 PF00117 Glutamine amidotransferase class-I L1L77_02315 PF06418 CTP synthase N-terminus L1L77_02320 PF14437 MafB19-like deaminase L1L77_02325 PF07690 Major Facilitator Superfamily L1L77_02325 PF00083 Sugar (and other) transporter L1L77_02335 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_02335 PF06480 FtsH Extracellular L1L77_02335 PF01434 Peptidase family M41 L1L77_02335 PF17862 AAA+ lid domain L1L77_02340 PF00364 Biotin-requiring enzyme L1L77_02340 PF02779 Transketolase, pyrimidine binding domain L1L77_02340 PF02780 Transketolase, C-terminal domain L1L77_02355 PF00009 Elongation factor Tu GTP binding domain L1L77_02355 PF14492 Elongation Factor G, domain II L1L77_02355 PF00679 Elongation factor G C-terminus L1L77_02355 PF06421 GTP-binding protein LepA C-terminus L1L77_02355 PF03144 Elongation factor Tu domain 2 L1L77_02380 PF01476 LysM domain L1L77_02380 PF08525 Opacity-associated protein A N-terminal motif L1L77_02380 PF01551 Peptidase family M23 L1L77_02385 PF01709 Transcriptional regulator L1L77_02390 PF13525 Outer membrane lipoprotein L1L77_02400 PF01066 CDP-alcohol phosphatidyltransferase L1L77_02405 PF01515 Phosphate acetyl/butaryl transferase L1L77_02405 PF03949 Malic enzyme, NAD binding domain L1L77_02405 PF00390 Malic enzyme, N-terminal domain L1L77_02420 PF00462 Glutaredoxin L1L77_02425 PF10415 Fumarase C C-terminus L1L77_02425 PF00206 Lyase L1L77_02435 PF01018 GTP1/OBG L1L77_02435 PF01926 50S ribosome-binding GTPase L1L77_02440 PF03952 Enolase, N-terminal domain L1L77_02440 PF00113 Enolase, C-terminal TIM barrel domain L1L77_02445 PF01225 Mur ligase family, catalytic domain L1L77_02445 PF02875 Mur ligase family, glutamate ligase domain L1L77_02445 PF08245 Mur ligase middle domain L1L77_02450 PF03330 Lytic transglycolase L1L77_02475 PF04055 Radical SAM superfamily L1L77_02475 PF00919 Uncharacterized protein family UPF0004 L1L77_02480 PF01425 Amidase L1L77_02485 PF01348 Type II intron maturase L1L77_02485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_02505 PF08676 MutL C terminal dimerisation domain L1L77_02505 PF01119 DNA mismatch repair protein, C-terminal domain L1L77_02545 PF01348 Type II intron maturase L1L77_02545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_02560 PF01527 Transposase L1L77_02565 PF13276 HTH-like domain L1L77_02565 PF00665 Integrase core domain L1L77_02565 PF13333 Integrase core domain L1L77_02570 PF13276 HTH-like domain L1L77_02570 PF00665 Integrase core domain L1L77_02570 PF13333 Integrase core domain L1L77_02590 PF01467 Cytidylyltransferase-like L1L77_02605 PF01255 Putative undecaprenyl diphosphate synthase L1L77_02615 PF01765 Ribosome recycling factor L1L77_02620 PF00696 Amino acid kinase family L1L77_02625 PF00889 Elongation factor TS L1L77_02630 PF00318 Ribosomal protein S2 L1L77_02640 PF02699 Preprotein translocase subunit L1L77_02645 PF01380 SIS domain L1L77_02660 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_02680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L1L77_02680 PF01565 FAD binding domain L1L77_02685 PF03900 Porphobilinogen deaminase, C-terminal domain L1L77_02685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L1L77_02690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1L77_02690 PF00364 Biotin-requiring enzyme L1L77_02690 PF02817 e3 binding domain L1L77_02715 PF02810 SEC-C motif L1L77_02715 PF01043 SecA preprotein cross-linking domain L1L77_02715 PF07516 SecA Wing and Scaffold domain L1L77_02715 PF07517 SecA DEAD-like domain L1L77_02725 PF00923 Transaldolase/Fructose-6-phosphate aldolase L1L77_02740 PF13333 Integrase core domain L1L77_02740 PF13276 HTH-like domain L1L77_02740 PF00665 Integrase core domain L1L77_02750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L1L77_02750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L1L77_02755 PF02441 Flavoprotein L1L77_02760 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) L1L77_02765 PF01595 Cyclin M transmembrane N-terminal domain L1L77_02765 PF03471 Transporter associated domain L1L77_02765 PF00571 CBS domain L1L77_02770 PF00202 Aminotransferase class-III L1L77_02775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L1L77_02790 PF01609 Transposase DDE domain L1L77_02800 PF01734 Patatin-like phospholipase L1L77_02940 PF18755 Restriction Enzyme Adenine Methylase Associated L1L77_02940 PF01555 DNA methylase L1L77_02950 PF00023 Ankyrin repeat L1L77_03005 PF01348 Type II intron maturase L1L77_03005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_03015 PF00176 SNF2 family N-terminal domain L1L77_03015 PF12419 SNF2 Helicase protein L1L77_03015 PF00271 Helicase conserved C-terminal domain L1L77_03020 PF12804 MobA-like NTP transferase domain L1L77_03020 PF14602 Hexapeptide repeat of succinyl-transferase L1L77_03020 PF00132 Bacterial transferase hexapeptide (six repeats) L1L77_03025 PF16363 GDP-mannose 4,6 dehydratase L1L77_03045 PF00664 ABC transporter transmembrane region L1L77_03045 PF00005 ABC transporter L1L77_03050 PF01212 Beta-eliminating lyase L1L77_03055 PF01212 Beta-eliminating lyase L1L77_03065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L1L77_03065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L1L77_03065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L1L77_03070 PF00892 EamA-like transporter family L1L77_03090 PF04002 RadC-like JAB domain L1L77_03095 PF01381 Helix-turn-helix L1L77_03130 PF02796 Helix-turn-helix domain of resolvase L1L77_03130 PF00239 Resolvase, N terminal domain L1L77_03200 PF00665 Integrase core domain L1L77_03200 PF13276 HTH-like domain L1L77_03200 PF13333 Integrase core domain L1L77_03205 PF01527 Transposase L1L77_03210 PF00529 HlyD membrane-fusion protein of T1SS L1L77_03210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L1L77_03230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L1L77_03230 PF00925 GTP cyclohydrolase II L1L77_03235 PF01272 Transcription elongation factor, GreA/GreB, C-term L1L77_03235 PF03449 Transcription elongation factor, N-terminal L1L77_03240 PF02874 ATP synthase alpha/beta family, beta-barrel domain L1L77_03240 PF00306 ATP synthase alpha/beta chain, C terminal domain L1L77_03240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1L77_03245 PF00213 ATP synthase delta (OSCP) subunit L1L77_03250 PF02021 Uncharacterised protein family UPF0102 L1L77_03255 PF01196 Ribosomal protein L17 L1L77_03260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L1L77_03260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L1L77_03260 PF01000 RNA polymerase Rpb3/RpoA insert domain L1L77_03265 PF00411 Ribosomal protein S11 L1L77_03270 PF00416 Ribosomal protein S13/S18 L1L77_03280 PF00344 SecY translocase L1L77_03285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L1L77_03290 PF03719 Ribosomal protein S5, C-terminal domain L1L77_03290 PF00333 Ribosomal protein S5, N-terminal domain L1L77_03295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L1L77_03300 PF00347 Ribosomal protein L6 L1L77_03305 PF00410 Ribosomal protein S8 L1L77_03310 PF00253 Ribosomal protein S14p/S29e L1L77_03315 PF00281 Ribosomal protein L5 L1L77_03315 PF00673 ribosomal L5P family C-terminus L1L77_03320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L1L77_03325 PF00238 Ribosomal protein L14p/L23e L1L77_03330 PF00366 Ribosomal protein S17 L1L77_03335 PF00831 Ribosomal L29 protein L1L77_03340 PF00252 Ribosomal protein L16p/L10e L1L77_03345 PF00189 Ribosomal protein S3, C-terminal domain L1L77_03345 PF07650 KH domain L1L77_03350 PF00237 Ribosomal protein L22p/L17e L1L77_03355 PF00203 Ribosomal protein S19 L1L77_03360 PF00181 Ribosomal Proteins L2, RNA binding domain L1L77_03360 PF03947 Ribosomal Proteins L2, C-terminal domain L1L77_03365 PF00276 Ribosomal protein L23 L1L77_03370 PF00573 Ribosomal protein L4/L1 family L1L77_03375 PF00297 Ribosomal protein L3 L1L77_03380 PF00338 Ribosomal protein S10p/S20e L1L77_03385 PF00009 Elongation factor Tu GTP binding domain L1L77_03385 PF03144 Elongation factor Tu domain 2 L1L77_03385 PF03143 Elongation factor Tu C-terminal domain L1L77_03400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L1L77_03400 PF00117 Glutamine amidotransferase class-I L1L77_03415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L1L77_03430 PF00391 PEP-utilising enzyme, mobile domain L1L77_03430 PF02896 PEP-utilising enzyme, TIM barrel domain L1L77_03430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L1L77_03445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_03455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L1L77_03455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L1L77_03455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L1L77_03455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L1L77_03475 PF02371 Transposase IS116/IS110/IS902 family L1L77_03475 PF01548 Transposase L1L77_03480 PF00814 Glycoprotease family L1L77_03495 PF00266 Aminotransferase class-V L1L77_03500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L1L77_03510 PF00005 ABC transporter L1L77_03515 PF01521 Iron-sulphur cluster biosynthesis L1L77_03520 PF01966 HD domain L1L77_03520 PF13286 Phosphohydrolase-associated domain L1L77_03525 PF01872 RibD C-terminal domain L1L77_03525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L1L77_03535 PF00834 Ribulose-phosphate 3 epimerase family L1L77_03545 PF00132 Bacterial transferase hexapeptide (six repeats) L1L77_03545 PF14602 Hexapeptide repeat of succinyl-transferase L1L77_03545 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal L1L77_03570 PF03717 Penicillin-binding Protein dimerisation domain L1L77_03570 PF00905 Penicillin binding protein transpeptidase domain L1L77_03575 PF00457 Glycosyl hydrolases family 11 L1L77_03575 PF01522 Polysaccharide deacetylase L1L77_03575 PF03422 Carbohydrate binding module (family 6) L1L77_03580 PF01078 Magnesium chelatase, subunit ChlI L1L77_03580 PF13335 Magnesium chelatase, subunit ChlI C-terminal L1L77_03590 PF00091 Tubulin/FtsZ family, GTPase domain L1L77_03590 PF12327 FtsZ family, C-terminal domain L1L77_03605 PF02130 Uncharacterized protein family UPF0054 L1L77_03610 PF13085 2Fe-2S iron-sulfur cluster binding domain L1L77_03625 PF04608 Phosphatidylglycerophosphatase A L1L77_03630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L1L77_03630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L1L77_03635 PF00486 Transcriptional regulatory protein, C terminal L1L77_03635 PF00072 Response regulator receiver domain L1L77_03655 PF01702 Queuine tRNA-ribosyltransferase L1L77_03665 PF05193 Peptidase M16 inactive domain L1L77_03665 PF00675 Insulinase (Peptidase family M16) L1L77_03670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L1L77_03670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L1L77_03675 PF01654 Cytochrome bd terminal oxidase subunit I L1L77_03680 PF02322 Cytochrome bd terminal oxidase subunit II L1L77_03685 PF01926 50S ribosome-binding GTPase L1L77_03685 PF07650 KH domain L1L77_03730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L1L77_03730 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_03735 PF00589 Phage integrase family L1L77_03735 PF02899 Phage integrase, N-terminal SAM-like domain L1L77_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_03755 PF00578 AhpC/TSA family L1L77_03755 PF10417 C-terminal domain of 1-Cys peroxiredoxin L1L77_03765 PF00462 Glutaredoxin L1L77_03770 PF06574 FAD synthetase L1L77_03770 PF01687 Riboflavin kinase L1L77_03775 PF01252 Signal peptidase (SPase) II L1L77_03780 PF05193 Peptidase M16 inactive domain L1L77_03780 PF00675 Insulinase (Peptidase family M16) L1L77_03790 PF00551 Formyl transferase L1L77_03810 PF01668 SmpB protein L1L77_03815 PF01790 Prolipoprotein diacylglyceryl transferase L1L77_03820 PF00005 ABC transporter L1L77_03820 PF00664 ABC transporter transmembrane region L1L77_03845 PF00436 Single-strand binding protein family L1L77_03850 PF00701 Dihydrodipicolinate synthetase family L1L77_03855 PF00533 BRCA1 C Terminus (BRCT) domain L1L77_03855 PF03120 NAD-dependent DNA ligase OB-fold domain L1L77_03855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L1L77_03855 PF12826 Helix-hairpin-helix motif L1L77_03855 PF01653 NAD-dependent DNA ligase adenylation domain L1L77_03860 PF00749 tRNA synthetases class I (E and Q), catalytic domain L1L77_03865 PF07733 Bacterial DNA polymerase III alpha NTPase domain L1L77_03865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L1L77_03865 PF02811 PHP domain L1L77_03865 PF14579 Helix-hairpin-helix motif L1L77_03870 PF01250 Ribosomal protein S6 L1L77_03875 PF01084 Ribosomal protein S18 L1L77_03880 PF03948 Ribosomal protein L9, C-terminal domain L1L77_03880 PF01281 Ribosomal protein L9, N-terminal domain L1L77_03895 PF10397 Adenylosuccinate lyase C-terminus L1L77_03895 PF00206 Lyase L1L77_03905 PF13685 Iron-containing alcohol dehydrogenase L1L77_03910 PF01546 Peptidase family M20/M25/M40 L1L77_03910 PF07687 Peptidase dimerisation domain L1L77_03915 PF00633 Helix-hairpin-helix motif L1L77_03915 PF00730 HhH-GPD superfamily base excision DNA repair protein L1L77_03915 PF10576 Iron-sulfur binding domain of endonuclease III L1L77_03925 PF00180 Isocitrate/isopropylmalate dehydrogenase L1L77_03925 PF18324 Hypothetical protein TT1725 L1L77_03940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L1L77_03940 PF07497 Rho termination factor, RNA-binding domain L1L77_03940 PF07498 Rho termination factor, N-terminal domain L1L77_03950 PF00639 PPIC-type PPIASE domain L1L77_03955 PF00886 Ribosomal protein S16 L1L77_03960 PF00348 Polyprenyl synthetase L1L77_03965 PF01025 GrpE L1L77_03970 PF00579 tRNA synthetases class I (W and Y) L1L77_03980 PF00034 Cytochrome c L1L77_04010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1L77_04010 PF03129 Anticodon binding domain L1L77_04015 PF01648 4'-phosphopantetheinyl transferase superfamily L1L77_04025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1L77_04025 PF00361 Proton-conducting membrane transporter L1L77_04025 PF13244 Domain of unknown function (DUF4040) L1L77_04045 PF01300 Telomere recombination L1L77_04065 PF17191 RecG wedge domain L1L77_04065 PF00271 Helicase conserved C-terminal domain L1L77_04065 PF00270 DEAD/DEAH box helicase L1L77_04110 PF01145 SPFH domain / Band 7 family L1L77_04115 PF01145 SPFH domain / Band 7 family L1L77_04120 PF13180 PDZ domain L1L77_04145 PF00271 Helicase conserved C-terminal domain L1L77_04145 PF12344 Ultra-violet resistance protein B L1L77_04145 PF17757 UvrB interaction domain L1L77_04145 PF04851 Type III restriction enzyme, res subunit L1L77_04145 PF02151 UvrB/uvrC motif L1L77_04160 PF02371 Transposase IS116/IS110/IS902 family L1L77_04160 PF01548 Transposase L1L77_04165 PF03918 Cytochrome C biogenesis protein L1L77_04175 PF00111 2Fe-2S iron-sulfur cluster binding domain L1L77_04185 PF08245 Mur ligase middle domain L1L77_04210 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1L77_04215 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1L77_04220 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1L77_04225 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L1L77_04230 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L1L77_04240 PF01921 tRNA synthetases class I (K) L1L77_04255 PF02272 DHHA1 domain L1L77_04255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1L77_04255 PF01411 tRNA synthetases class II (A) L1L77_04265 PF01632 Ribosomal protein L35 L1L77_04270 PF00453 Ribosomal protein L20 L1L77_04275 PF02911 Formyl transferase, C-terminal domain L1L77_04275 PF00551 Formyl transferase L1L77_04280 PF01808 AICARFT/IMPCHase bienzyme L1L77_04280 PF02142 MGS-like domain L1L77_04290 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L1L77_04290 PF01676 Metalloenzyme superfamily L1L77_04295 PF00698 Acyl transferase domain L1L77_04300 PF01197 Ribosomal protein L31 L1L77_04305 PF01513 ATP-NAD kinase L1L77_04320 PF13276 HTH-like domain L1L77_04320 PF00665 Integrase core domain L1L77_04320 PF13333 Integrase core domain L1L77_04355 PF00085 Thioredoxin L1L77_04365 PF03070 TENA/THI-4/PQQC family L1L77_04375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1L77_04375 PF00809 Pterin binding enzyme L1L77_04380 PF00809 Pterin binding enzyme L1L77_04380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L1L77_04385 PF00186 Dihydrofolate reductase L1L77_04395 PF18073 Rubredoxin metal binding domain L1L77_04400 PF02881 SRP54-type protein, helical bundle domain L1L77_04400 PF00448 SRP54-type protein, GTPase domain L1L77_04405 PF01592 NifU-like N terminal domain L1L77_04410 PF01521 Iron-sulphur cluster biosynthesis L1L77_04415 PF07743 HSCB C-terminal oligomerisation domain L1L77_04420 PF00012 Hsp70 protein L1L77_04425 PF10502 Signal peptidase, peptidase S26 L1L77_04430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L1L77_04430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L1L77_04475 PF16198 tRNA pseudouridylate synthase B C-terminal domain L1L77_04475 PF01509 TruB family pseudouridylate synthase (N terminal domain) L1L77_04480 PF00312 Ribosomal protein S15 L1L77_04485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L1L77_04485 PF01138 3' exoribonuclease family, domain 1 L1L77_04485 PF03725 3' exoribonuclease family, domain 2 L1L77_04485 PF00575 S1 RNA binding domain L1L77_04485 PF00013 KH domain L1L77_04515 PF00586 AIR synthase related protein, N-terminal domain L1L77_04515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L1L77_04515 PF02769 AIR synthase related protein, C-terminal domain L1L77_04530 PF17760 UvrA interaction domain L1L77_04530 PF17755 UvrA DNA-binding domain L1L77_04565 PF08245 Mur ligase middle domain L1L77_04565 PF02875 Mur ligase family, glutamate ligase domain L1L77_04570 PF01053 Cys/Met metabolism PLP-dependent enzyme L1L77_04580 PF00012 Hsp70 protein L1L77_04585 PF00575 S1 RNA binding domain L1L77_04585 PF12111 Polyribonucleotide phosphorylase C terminal L1L77_04585 PF10150 Ribonuclease E/G family L1L77_04590 PF00471 Ribosomal protein L33 L1L77_04620 PF01297 Zinc-uptake complex component A periplasmic L1L77_04625 PF00005 ABC transporter L1L77_04630 PF03109 ABC1 family L1L77_04680 PF00107 Zinc-binding dehydrogenase L1L77_04680 PF08240 Alcohol dehydrogenase GroES-like domain L1L77_04685 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 L1L77_04690 PF01027 Inhibitor of apoptosis-promoting Bax1 L1L77_04695 PF00588 SpoU rRNA Methylase family L1L77_04695 PF08032 RNA 2'-O ribose methyltransferase substrate binding L1L77_04705 PF01118 Semialdehyde dehydrogenase, NAD binding domain L1L77_04705 PF02774 Semialdehyde dehydrogenase, dimerisation domain L1L77_04725 PF13520 Amino acid permease L1L77_04745 PF00696 Amino acid kinase family L1L77_04745 PF13840 ACT domain L1L77_04745 PF01842 ACT domain L1L77_04765 PF00580 UvrD/REP helicase N-terminal domain L1L77_04765 PF13361 UvrD-like helicase C-terminal domain L1L77_04775 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L1L77_04780 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L1L77_04785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1L77_04785 PF00361 Proton-conducting membrane transporter L1L77_04790 PF00361 Proton-conducting membrane transporter L1L77_04795 PF00361 Proton-conducting membrane transporter L1L77_04800 PF03099 Biotin/lipoate A/B protein ligase family L1L77_04800 PF02237 Biotin protein ligase C terminal domain L1L77_04800 PF02237 Biotin protein ligase C terminal domain L1L77_04800 PF08279 HTH domain L1L77_04800 PF08279 HTH domain L1L77_04800 PF03099 Biotin/lipoate A/B protein ligase family L1L77_04810 PF03100 CcmE L1L77_04840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L1L77_04840 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L1L77_04840 PF10531 SLBB domain L1L77_04845 PF00707 Translation initiation factor IF-3, C-terminal domain L1L77_04845 PF05198 Translation initiation factor IF-3, N-terminal domain L1L77_04850 PF03129 Anticodon binding domain L1L77_04850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L1L77_04850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L1L77_04860 PF12838 4Fe-4S dicluster domain L1L77_04865 PF01926 50S ribosome-binding GTPase L1L77_04865 PF12631 MnmE helical domain L1L77_04865 PF10396 GTP-binding protein TrmE N-terminus L1L77_04875 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_04885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L1L77_04885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L1L77_04890 PF02504 Fatty acid synthesis protein L1L77_04895 PF01783 Ribosomal L32p protein family L1L77_04900 PF02405 Permease MlaE L1L77_04905 PF00005 ABC transporter L1L77_04915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L1L77_04915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L1L77_04915 PF13288 DXP reductoisomerase C-terminal domain L1L77_04930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_04940 PF00266 Aminotransferase class-V L1L77_04950 PF01523 Putative modulator of DNA gyrase L1L77_04980 PF00476 DNA polymerase family A L1L77_04980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L1L77_04980 PF01367 5'-3' exonuclease, C-terminal SAM fold L1L77_04985 PF13333 Integrase core domain L1L77_04985 PF00665 Integrase core domain L1L77_04985 PF13276 HTH-like domain L1L77_04990 PF00665 Integrase core domain L1L77_04990 PF13333 Integrase core domain L1L77_04990 PF13276 HTH-like domain L1L77_05020 PF01321 Creatinase/Prolidase N-terminal domain L1L77_05020 PF00557 Metallopeptidase family M24 L1L77_05025 PF01134 Glucose inhibited division protein A L1L77_05025 PF13932 GidA associated domain L1L77_05035 PF03023 Lipid II flippase MurJ L1L77_05045 PF04860 Phage portal protein L1L77_05060 PF03099 Biotin/lipoate A/B protein ligase family L1L77_05065 PF17676 LD-carboxypeptidase C-terminal domain L1L77_05065 PF02016 LD-carboxypeptidase N-terminal domain L1L77_05080 PF00528 Binding-protein-dependent transport system inner membrane component L1L77_05090 PF01245 Ribosomal protein L19 L1L77_05095 PF01746 tRNA (Guanine-1)-methyltransferase L1L77_05100 PF01259 SAICAR synthetase L1L77_05105 PF00586 AIR synthase related protein, N-terminal domain L1L77_05105 PF02769 AIR synthase related protein, C-terminal domain L1L77_05120 PF00571 CBS domain L1L77_05120 PF03471 Transporter associated domain L1L77_05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) L1L77_05130 PF00155 Aminotransferase class I and II L1L77_05160 PF00464 Serine hydroxymethyltransferase L1L77_05185 PF01545 Cation efflux family L1L77_05200 PF02660 Glycerol-3-phosphate acyltransferase L1L77_05205 PF01235 Sodium:alanine symporter family L1L77_05210 PF01235 Sodium:alanine symporter family L1L77_05215 PF01066 CDP-alcohol phosphatidyltransferase L1L77_05220 PF02666 Phosphatidylserine decarboxylase L1L77_05225 PF00154 recA bacterial DNA recombination protein L1L77_05230 PF00684 DnaJ central domain L1L77_05230 PF00226 DnaJ domain L1L77_05230 PF01556 DnaJ C terminal domain L1L77_05235 PF02875 Mur ligase family, glutamate ligase domain L1L77_05235 PF08245 Mur ligase middle domain L1L77_05250 PF03364 Polyketide cyclase / dehydrase and lipid transport L1L77_05255 PF13462 Thioredoxin L1L77_05285 PF12169 DNA polymerase III subunits gamma and tau domain III L1L77_05290 PF02575 YbaB/EbfC DNA-binding family L1L77_05295 PF13505 Outer membrane protein beta-barrel domain L1L77_05300 PF04545 Sigma-70, region 4 L1L77_05300 PF00140 Sigma-70 factor, region 1.2 L1L77_05300 PF04542 Sigma-70 region 2 L1L77_05310 PF00712 DNA polymerase III beta subunit, N-terminal domain L1L77_05310 PF02767 DNA polymerase III beta subunit, central domain L1L77_05310 PF02768 DNA polymerase III beta subunit, C-terminal domain L1L77_05315 PF01416 tRNA pseudouridine synthase L1L77_05325 PF00033 Cytochrome b/b6/petB L1L77_05325 PF02167 Cytochrome C1 family L1L77_05325 PF00032 Cytochrome b(C-terminal)/b6/petD L1L77_05330 PF00032 Cytochrome b(C-terminal)/b6/petD L1L77_05330 PF00033 Cytochrome b/b6/petB L1L77_05335 PF01556 DnaJ C terminal domain L1L77_05335 PF00684 DnaJ central domain L1L77_05335 PF00226 DnaJ domain L1L77_05345 PF00226 DnaJ domain L1L77_05345 PF01556 DnaJ C terminal domain L1L77_05345 PF00684 DnaJ central domain L1L77_05355 PF03129 Anticodon binding domain L1L77_05355 PF13393 Histidyl-tRNA synthetase L1L77_05360 PF01975 Survival protein SurE L1L77_05365 PF02978 Signal peptide binding domain L1L77_05365 PF02881 SRP54-type protein, helical bundle domain L1L77_05365 PF00448 SRP54-type protein, GTPase domain L1L77_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_05380 PF07977 FabA-like domain L1L77_05390 PF01103 Surface antigen L1L77_05390 PF07244 Surface antigen variable number repeat L1L77_05395 PF17820 PDZ domain L1L77_05395 PF02163 Peptidase family M50 L1L77_05410 PF00216 Bacterial DNA-binding protein L1L77_05415 PF00575 S1 RNA binding domain L1L77_05420 PF02390 Putative methyltransferase L1L77_05430 PF01258 Prokaryotic dksA/traR C4-type zinc finger L1L77_05445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L1L77_05445 PF01926 50S ribosome-binding GTPase L1L77_05455 PF03232 Ubiquinone biosynthesis protein COQ7 L1L77_05460 PF00953 Glycosyl transferase family 4 L1L77_05465 PF01351 Ribonuclease HII L1L77_05485 PF00361 Proton-conducting membrane transporter L1L77_05490 PF01098 Cell cycle protein L1L77_05495 PF00156 Phosphoribosyl transferase domain L1L77_05495 PF13537 Glutamine amidotransferase domain L1L77_05500 PF02245 Methylpurine-DNA glycosylase (MPG) L1L77_05510 PF17864 RuvB AAA lid domain L1L77_05510 PF05491 RuvB C-terminal winged helix domain L1L77_05510 PF05496 Holliday junction DNA helicase RuvB P-loop domain L1L77_05515 PF07499 RuvA, C-terminal domain L1L77_05515 PF01330 RuvA N terminal domain L1L77_05535 PF00579 tRNA synthetases class I (W and Y) L1L77_05555 PF00293 NUDIX domain L1L77_05560 PF01026 TatD related DNase L1L77_05565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L1L77_05565 PF00056 lactate/malate dehydrogenase, NAD binding domain L1L77_05570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L1L77_05575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L1L77_05580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L1L77_05585 PF01230 HIT domain L1L77_05600 PF01225 Mur ligase family, catalytic domain L1L77_05600 PF02875 Mur ligase family, glutamate ligase domain L1L77_05600 PF08245 Mur ligase middle domain L1L77_05605 PF08338 Domain of unknown function (DUF1731) L1L77_05605 PF01370 NAD dependent epimerase/dehydratase family L1L77_05620 PF01131 DNA topoisomerase L1L77_05620 PF13368 Topoisomerase C-terminal repeat L1L77_05620 PF01396 Topoisomerase DNA binding C4 zinc finger L1L77_05620 PF01751 Toprim domain L1L77_05625 PF00581 Rhodanese-like domain L1L77_05625 PF17773 UPF0176 acylphosphatase like domain L1L77_05630 PF00528 Binding-protein-dependent transport system inner membrane component L1L77_05640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L1L77_05655 PF04379 ApaG domain L1L77_05660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L1L77_05660 PF02222 ATP-grasp domain L1L77_05665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L1L77_05665 PF02542 YgbB family L1L77_05670 PF01594 AI-2E family transporter L1L77_05680 PF00589 Phage integrase family L1L77_05680 PF02899 Phage integrase, N-terminal SAM-like domain L1L77_05695 PF01649 Ribosomal protein S20 L1L77_05700 PF00285 Citrate synthase, C-terminal domain L1L77_05720 PF01039 Carboxyl transferase domain L1L77_05730 PF06827 Zinc finger found in FPG and IleRS L1L77_05730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L1L77_05730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L1L77_05735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L1L77_05735 PF01243 Pyridoxamine 5'-phosphate oxidase L1L77_05745 PF03772 Competence protein L1L77_05745 PF00753 Metallo-beta-lactamase superfamily L1L77_05755 PF00849 RNA pseudouridylate synthase L1L77_05755 PF01479 S4 domain L1L77_05760 PF01219 Prokaryotic diacylglycerol kinase L1L77_05780 PF00162 Phosphoglycerate kinase L1L77_05790 PF03060 Nitronate monooxygenase L1L77_05805 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L1L77_05825 PF02817 e3 binding domain L1L77_05825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L1L77_05825 PF00364 Biotin-requiring enzyme L1L77_05840 PF02132 RecR protein L1L77_05840 PF13662 Toprim domain L1L77_05850 PF00334 Nucleoside diphosphate kinase L1L77_05865 PF00762 Ferrochelatase L1L77_05880 PF00227 Proteasome subunit L1L77_05885 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_05885 PF07724 AAA domain (Cdc48 subfamily) L1L77_05885 PF10431 C-terminal, D2-small domain, of ClpB protein L1L77_05895 PF00348 Polyprenyl synthetase L1L77_05900 PF00550 Phosphopantetheine attachment site L1L77_05905 PF00109 Beta-ketoacyl synthase, N-terminal domain L1L77_05905 PF02801 Beta-ketoacyl synthase, C-terminal domain L1L77_05920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L1L77_05925 PF02511 Thymidylate synthase complementing protein L1L77_05935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L1L77_05935 PF18074 Primosomal protein N C-terminal domain L1L77_05935 PF17764 3′ DNA-binding domain (3′BD) L1L77_05935 PF00271 Helicase conserved C-terminal domain L1L77_05935 PF00270 DEAD/DEAH box helicase L1L77_05940 PF00355 Rieske [2Fe-2S] domain L1L77_05940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal L1L77_05945 PF03989 DNA gyrase C-terminal domain, beta-propeller L1L77_05945 PF00521 DNA gyrase/topoisomerase IV, subunit A L1L77_05975 PF02632 BioY family L1L77_05980 PF00881 Nitroreductase family L1L77_05985 PF01678 Diaminopimelate epimerase L1L77_05990 PF02629 CoA binding domain L1L77_05990 PF00549 CoA-ligase L1L77_05995 PF00549 CoA-ligase L1L77_05995 PF08442 ATP-grasp domain L1L77_06010 PF04452 RNA methyltransferase L1L77_06025 PF01218 Coproporphyrinogen III oxidase L1L77_06035 PF13614 AAA domain L1L77_06040 PF17762 HTH domain found in ParB protein L1L77_06040 PF02195 ParB-like nuclease domain L1L77_06060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1L77_06065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L1L77_06075 PF00483 Nucleotidyl transferase L1L77_06075 PF01050 Mannose-6-phosphate isomerase L1L77_06085 PF01050 Mannose-6-phosphate isomerase L1L77_06085 PF00483 Nucleotidyl transferase L1L77_06095 PF12704 MacB-like periplasmic core domain L1L77_06095 PF02687 FtsX-like permease family L1L77_06115 PF00231 ATP synthase L1L77_06120 PF01523 Putative modulator of DNA gyrase L1L77_06125 PF00313 'Cold-shock' DNA-binding domain L1L77_06130 PF00271 Helicase conserved C-terminal domain L1L77_06130 PF00270 DEAD/DEAH box helicase L1L77_06135 PF17871 AAA lid domain L1L77_06135 PF10431 C-terminal, D2-small domain, of ClpB protein L1L77_06135 PF02861 Clp amino terminal domain, pathogenicity island component L1L77_06135 PF07724 AAA domain (Cdc48 subfamily) L1L77_06135 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_06140 PF01791 DeoC/LacD family aldolase L1L77_06150 PF01180 Dihydroorotate dehydrogenase L1L77_06155 PF00035 Double-stranded RNA binding motif L1L77_06155 PF14622 Ribonuclease-III-like L1L77_06170 PF13091 PLD-like domain L1L77_06195 PF00210 Ferritin-like domain L1L77_06205 PF00999 Sodium/hydrogen exchanger family L1L77_06205 PF02254 TrkA-N domain L1L77_06215 PF02223 Thymidylate kinase L1L77_06225 PF01434 Peptidase family M41 L1L77_06225 PF06480 FtsH Extracellular L1L77_06225 PF00004 ATPase family associated with various cellular activities (AAA) L1L77_06225 PF17862 AAA+ lid domain L1L77_06230 PF01171 PP-loop family L1L77_06235 PF00691 OmpA family L1L77_06265 PF00719 Inorganic pyrophosphatase L1L77_06280 PF00639 PPIC-type PPIASE domain L1L77_06280 PF09312 SurA N-terminal domain L1L77_06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase L1L77_06315 PF03717 Penicillin-binding Protein dimerisation domain L1L77_06315 PF00905 Penicillin binding protein transpeptidase domain L1L77_06320 PF02401 LytB protein L1L77_06330 PF00183 Hsp90 protein L1L77_06340 PF00155 Aminotransferase class I and II L1L77_06350 PF01132 Elongation factor P (EF-P) OB domain L1L77_06350 PF09285 Elongation factor P, C-terminal L1L77_06350 PF08207 Elongation factor P (EF-P) KOW-like domain L1L77_06355 PF05239 PRC-barrel domain L1L77_06355 PF01782 RimM N-terminal domain L1L77_06360 PF00202 Aminotransferase class-III L1L77_06365 PF00989 PAS fold L1L77_06365 PF00512 His Kinase A (phospho-acceptor) domain L1L77_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L1L77_06370 PF00578 AhpC/TSA family L1L77_06375 PF02463 RecF/RecN/SMC N terminal domain L1L77_06395 PF03631 Virulence factor BrkB L1L77_06410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L1L77_06410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L1L77_06410 PF02142 MGS-like domain L1L77_06430 PF04539 Sigma-70 region 3 L1L77_06430 PF04545 Sigma-70, region 4 L1L77_06430 PF04546 Sigma-70, non-essential region L1L77_06430 PF03979 Sigma-70 factor, region 1.1 L1L77_06430 PF00140 Sigma-70 factor, region 1.2 L1L77_06430 PF04542 Sigma-70 region 2 L1L77_06435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L1L77_06445 PF13244 Domain of unknown function (DUF4040) L1L77_06445 PF00361 Proton-conducting membrane transporter L1L77_06445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L1L77_06450 PF03334 Na+/H+ antiporter subunit L1L77_06460 PF01192 RNA polymerase Rpb6 L1L77_06470 PF00731 AIR carboxylase L1L77_06475 PF01119 DNA mismatch repair protein, C-terminal domain L1L77_06475 PF08676 MutL C terminal dimerisation domain L1L77_06480 PF02779 Transketolase, pyrimidine binding domain L1L77_06480 PF16870 2-oxoglutarate dehydrogenase C-terminal L1L77_06480 PF16078 2-oxoglutarate dehydrogenase N-terminus L1L77_06480 PF00676 Dehydrogenase E1 component L1L77_06505 PF13784 Fic/DOC family N-terminal L1L77_06505 PF02661 Fic/DOC family L1L77_06510 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase L1L77_06515 PF01040 UbiA prenyltransferase family L1L77_06520 PF02033 Ribosome-binding factor A L1L77_06525 PF11987 Translation-initiation factor 2 L1L77_06525 PF00009 Elongation factor Tu GTP binding domain L1L77_06525 PF04760 Translation initiation factor IF-2, N-terminal region L1L77_06530 PF08529 NusA N-terminal domain L1L77_06530 PF13184 NusA-like KH domain L1L77_06530 PF00575 S1 RNA binding domain L1L77_06535 PF00873 AcrB/AcrD/AcrF family L1L77_06545 PF00120 Glutamine synthetase, catalytic domain