locus-tag class description L0Z56_00005 PF00308 Bacterial dnaA protein L0Z56_00005 PF08299 Bacterial dnaA protein helix-turn-helix L0Z56_00005 PF11638 DnaA N-terminal domain L0Z56_00020 PF00925 GTP cyclohydrolase II L0Z56_00025 PF04335 VirB8 protein L0Z56_00040 PF00437 Type II/IV secretion system protein L0Z56_00045 PF02534 Type IV secretory system Conjugative DNA transfer L0Z56_00055 PF13847 Methyltransferase domain L0Z56_00055 PF17827 PrmC N-terminal domain L0Z56_00065 PF00164 Ribosomal protein S12/S23 L0Z56_00070 PF00177 Ribosomal protein S7p/S5e L0Z56_00075 PF00009 Elongation factor Tu GTP binding domain L0Z56_00075 PF03764 Elongation factor G, domain IV L0Z56_00075 PF03144 Elongation factor Tu domain 2 L0Z56_00075 PF00679 Elongation factor G C-terminus L0Z56_00075 PF14492 Elongation Factor G, domain II L0Z56_00080 PF00009 Elongation factor Tu GTP binding domain L0Z56_00080 PF03144 Elongation factor Tu domain 2 L0Z56_00080 PF03143 Elongation factor Tu C-terminal domain L0Z56_00095 PF00467 KOW motif L0Z56_00095 PF02357 Transcription termination factor nusG L0Z56_00100 PF03946 Ribosomal protein L11, N-terminal domain L0Z56_00100 PF00298 Ribosomal protein L11, RNA binding domain L0Z56_00105 PF00687 Ribosomal protein L1p/L10e family L0Z56_00110 PF00466 Ribosomal protein L10 L0Z56_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain L0Z56_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain L0Z56_00120 PF04565 RNA polymerase Rpb2, domain 3 L0Z56_00120 PF04560 RNA polymerase Rpb2, domain 7 L0Z56_00120 PF00562 RNA polymerase Rpb2, domain 6 L0Z56_00120 PF10385 RNA polymerase beta subunit external 1 domain L0Z56_00120 PF04561 RNA polymerase Rpb2, domain 2 L0Z56_00120 PF04983 RNA polymerase Rpb1, domain 3 L0Z56_00120 PF04998 RNA polymerase Rpb1, domain 5 L0Z56_00120 PF05000 RNA polymerase Rpb1, domain 4 L0Z56_00120 PF04563 RNA polymerase beta subunit L0Z56_00120 PF00623 RNA polymerase Rpb1, domain 2 L0Z56_00120 PF04997 RNA polymerase Rpb1, domain 1 L0Z56_00125 PF01207 Dihydrouridine synthase (Dus) L0Z56_00145 PF02403 Seryl-tRNA synthetase N-terminal domain L0Z56_00145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z56_00150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L0Z56_00150 PF02843 Phosphoribosylglycinamide synthetase, C domain L0Z56_00150 PF02844 Phosphoribosylglycinamide synthetase, N domain L0Z56_00175 PF14572 Phosphoribosyl synthetase-associated domain L0Z56_00175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L0Z56_00180 PF02686 Glu-tRNAGln amidotransferase C subunit L0Z56_00185 PF07676 WD40-like Beta Propeller Repeat L0Z56_00185 PF04052 TolB amino-terminal domain L0Z56_00190 PF12706 Beta-lactamase superfamily domain L0Z56_00190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0Z56_00190 PF17770 Ribonuclease J C-terminal domain L0Z56_00195 PF00226 DnaJ domain L0Z56_00195 PF01556 DnaJ C terminal domain L0Z56_00195 PF00684 DnaJ central domain L0Z56_00255 PF00883 Cytosol aminopeptidase family, catalytic domain L0Z56_00255 PF02789 Cytosol aminopeptidase family, N-terminal domain L0Z56_00265 PF00216 Bacterial DNA-binding protein L0Z56_00275 PF01551 Peptidase family M23 L0Z56_00280 PF13603 Leucyl-tRNA synthetase, Domain 2 L0Z56_00280 PF09334 tRNA synthetases class I (M) L0Z56_00280 PF08264 Anticodon-binding domain of tRNA L0Z56_00280 PF00133 tRNA synthetases class I (I, L, M and V) L0Z56_00290 PF13276 HTH-like domain L0Z56_00290 PF00665 Integrase core domain L0Z56_00290 PF13333 Integrase core domain L0Z56_00295 PF13276 HTH-like domain L0Z56_00295 PF00665 Integrase core domain L0Z56_00295 PF13333 Integrase core domain L0Z56_00310 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L0Z56_00320 PF00380 Ribosomal protein S9/S16 L0Z56_00325 PF00572 Ribosomal protein L13 L0Z56_00335 PF10691 Protein of unknown function (DUF2497) L0Z56_00340 PF01728 FtsJ-like methyltransferase L0Z56_00375 PF13276 HTH-like domain L0Z56_00375 PF13333 Integrase core domain L0Z56_00375 PF00665 Integrase core domain L0Z56_00380 PF13276 HTH-like domain L0Z56_00380 PF00665 Integrase core domain L0Z56_00380 PF13333 Integrase core domain L0Z56_00410 PF02355 Protein export membrane protein L0Z56_00435 PF00571 CBS domain L0Z56_00435 PF00478 IMP dehydrogenase / GMP reductase domain L0Z56_00440 PF00398 Ribosomal RNA adenine dimethylase L0Z56_00450 PF00121 Triosephosphate isomerase L0Z56_00455 PF02481 DNA recombination-mediator protein A L0Z56_00455 PF17782 DprA winged helix domain L0Z56_00460 PF00037 4Fe-4S binding domain L0Z56_00460 PF11953 Domain of unknown function (DUF3470) L0Z56_00470 PF01820 D-ala D-ala ligase N-terminus L0Z56_00470 PF07478 D-ala D-ala ligase C-terminus L0Z56_00475 PF03799 Cell division protein FtsQ L0Z56_00475 PF08478 POTRA domain, FtsQ-type L0Z56_00480 PF07943 Penicillin-binding protein 5, C-terminal domain L0Z56_00480 PF00768 D-alanyl-D-alanine carboxypeptidase L0Z56_00485 PF00893 Small Multidrug Resistance protein L0Z56_00490 PF00893 Small Multidrug Resistance protein L0Z56_00500 PF14850 DNA-binding domain of Proline dehydrogenase L0Z56_00500 PF00171 Aldehyde dehydrogenase family L0Z56_00500 PF01619 Proline dehydrogenase L0Z56_00500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain L0Z56_00505 PF00694 Aconitase C-terminal domain L0Z56_00505 PF00330 Aconitase family (aconitate hydratase) L0Z56_00510 PF02556 Preprotein translocase subunit SecB L0Z56_00520 PF00929 Exonuclease L0Z56_00525 PF02630 SCO1/SenC L0Z56_00535 PF01751 Toprim domain L0Z56_00535 PF00986 DNA gyrase B subunit, carboxyl terminus L0Z56_00535 PF00204 DNA gyrase B L0Z56_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0Z56_00550 PF13276 HTH-like domain L0Z56_00550 PF00665 Integrase core domain L0Z56_00550 PF13333 Integrase core domain L0Z56_00560 PF01609 Transposase DDE domain L0Z56_00565 PF04551 GcpE protein L0Z56_00580 PF09397 Ftsk gamma domain L0Z56_00580 PF01580 FtsK/SpoIIIE family L0Z56_00580 PF17854 FtsK alpha domain L0Z56_00580 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L0Z56_00585 PF02325 YGGT family L0Z56_00635 PF00677 Lumazine binding domain L0Z56_00645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L0Z56_00645 PF01409 tRNA synthetases class II core domain (F) L0Z56_00650 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z56_00650 PF14602 Hexapeptide repeat of succinyl-transferase L0Z56_00650 PF12804 MobA-like NTP transferase domain L0Z56_00655 PF00829 Ribosomal prokaryotic L21 protein L0Z56_00660 PF01016 Ribosomal L27 protein L0Z56_00670 PF00438 S-adenosylmethionine synthetase, N-terminal domain L0Z56_00670 PF02773 S-adenosylmethionine synthetase, C-terminal domain L0Z56_00670 PF02772 S-adenosylmethionine synthetase, central domain L0Z56_00680 PF03070 TENA/THI-4/PQQC family L0Z56_00690 PF00510 Cytochrome c oxidase subunit III L0Z56_00695 PF02075 Crossover junction endodeoxyribonuclease RuvC L0Z56_00700 PF03652 Holliday junction resolvase L0Z56_00710 PF02637 GatB domain L0Z56_00710 PF02934 GatB/GatE catalytic domain L0Z56_00725 PF01406 tRNA synthetases class I (C) catalytic domain L0Z56_00725 PF09190 DALR domain L0Z56_00730 PF06055 Exopolysaccharide synthesis, ExoD L0Z56_00740 PF02416 mttA/Hcf106 family L0Z56_00745 PF08402 TOBE domain L0Z56_00745 PF00005 ABC transporter L0Z56_00755 PF01541 GIY-YIG catalytic domain L0Z56_00755 PF02151 UvrB/uvrC motif L0Z56_00755 PF08459 UvrC Helix-hairpin-helix N-terminal L0Z56_00760 PF05746 DALR anticodon binding domain L0Z56_00760 PF02092 Glycyl-tRNA synthetase beta subunit L0Z56_00765 PF02091 Glycyl-tRNA synthetase alpha subunit L0Z56_00775 PF00490 Delta-aminolevulinic acid dehydratase L0Z56_00780 PF00146 NADH dehydrogenase L0Z56_00785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L0Z56_00785 PF00384 Molybdopterin oxidoreductase L0Z56_00785 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal L0Z56_00800 PF03167 Uracil DNA glycosylase superfamily L0Z56_00805 PF01327 Polypeptide deformylase L0Z56_00810 PF02491 SHS2 domain inserted in FTSA L0Z56_00815 PF00557 Metallopeptidase family M24 L0Z56_00820 PF07690 Major Facilitator Superfamily L0Z56_00820 PF00083 Sugar (and other) transporter L0Z56_00825 PF01795 MraW methylase family L0Z56_00840 PF14693 Ribosomal protein TL5, C-terminal domain L0Z56_00840 PF01386 Ribosomal L25p family L0Z56_00845 PF01195 Peptidyl-tRNA hydrolase L0Z56_00860 PF01494 FAD binding domain L0Z56_00870 PF10609 NUBPL iron-transfer P-loop NTPase L0Z56_00895 PF13333 Integrase core domain L0Z56_00895 PF00665 Integrase core domain L0Z56_00895 PF13276 HTH-like domain L0Z56_00900 PF13333 Integrase core domain L0Z56_00900 PF00665 Integrase core domain L0Z56_00900 PF13276 HTH-like domain L0Z56_00915 PF01121 Dephospho-CoA kinase L0Z56_00920 PF00570 HRDC domain L0Z56_00920 PF01612 3'-5' exonuclease L0Z56_00925 PF05192 MutS domain III L0Z56_00925 PF01624 MutS domain I L0Z56_00925 PF05188 MutS domain II L0Z56_00925 PF05190 MutS family domain IV L0Z56_00925 PF00488 MutS domain V L0Z56_00940 PF00571 CBS domain L0Z56_00940 PF03471 Transporter associated domain L0Z56_00940 PF03741 Integral membrane protein TerC family L0Z56_00945 PF00117 Glutamine amidotransferase class-I L0Z56_00945 PF00958 GMP synthase C terminal domain L0Z56_00945 PF02540 NAD synthase L0Z56_00950 PF03477 ATP cone domain L0Z56_00950 PF02867 Ribonucleotide reductase, barrel domain L0Z56_00950 PF00317 Ribonucleotide reductase, all-alpha domain L0Z56_00955 PF01209 ubiE/COQ5 methyltransferase family L0Z56_00980 PF00468 Ribosomal protein L34 L0Z56_00985 PF00528 Binding-protein-dependent transport system inner membrane component L0Z56_00990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z56_00990 PF02874 ATP synthase alpha/beta family, beta-barrel domain L0Z56_00995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L0Z56_01020 PF00596 Class II Aldolase and Adducin N-terminal domain L0Z56_01030 PF00814 Glycoprotease family L0Z56_01040 PF00268 Ribonucleotide reductase, small chain L0Z56_01065 PF17761 DUF1016 N-terminal domain L0Z56_01065 PF06250 YhcG PDDEXK nuclease domain L0Z56_01075 PF11967 Recombination protein O N terminal L0Z56_01075 PF02565 Recombination protein O C terminal L0Z56_01085 PF00990 Diguanylate cyclase, GGDEF domain L0Z56_01085 PF00072 Response regulator receiver domain L0Z56_01095 PF05088 Bacterial NAD-glutamate dehydrogenase L0Z56_01100 PF07724 AAA domain (Cdc48 subfamily) L0Z56_01100 PF02861 Clp amino terminal domain, pathogenicity island component L0Z56_01100 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z56_01100 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_01100 PF17871 AAA lid domain L0Z56_01115 PF00679 Elongation factor G C-terminus L0Z56_01115 PF00009 Elongation factor Tu GTP binding domain L0Z56_01115 PF03144 Elongation factor Tu domain 2 L0Z56_01120 PF00156 Phosphoribosyl transferase domain L0Z56_01125 PF00375 Sodium:dicarboxylate symporter family L0Z56_01130 PF01979 Amidohydrolase family L0Z56_01145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L0Z56_01145 PF01578 Cytochrome C assembly protein L0Z56_01160 PF07549 SecD/SecF GG Motif L0Z56_01160 PF02355 Protein export membrane protein L0Z56_01170 PF02096 60Kd inner membrane protein L0Z56_01170 PF14849 YidC periplasmic domain L0Z56_01175 PF00885 6,7-dimethyl-8-ribityllumazine synthase L0Z56_01180 PF01029 NusB family L0Z56_01210 PF00692 dUTPase L0Z56_01215 PF00696 Amino acid kinase family L0Z56_01220 PF01926 50S ribosome-binding GTPase L0Z56_01225 PF03462 PCRF domain L0Z56_01225 PF00472 RF-1 domain L0Z56_01230 PF07690 Major Facilitator Superfamily L0Z56_01255 PF02646 RmuC family L0Z56_01260 PF01609 Transposase DDE domain L0Z56_01265 PF00872 Transposase, Mutator family L0Z56_01275 PF08671 Anti-repressor SinI L0Z56_01275 PF01381 Helix-turn-helix L0Z56_01285 PF04002 RadC-like JAB domain L0Z56_01290 PF01348 Type II intron maturase L0Z56_01290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_01315 PF18755 Restriction Enzyme Adenine Methylase Associated L0Z56_01315 PF01555 DNA methylase L0Z56_01360 PF02371 Transposase IS116/IS110/IS902 family L0Z56_01360 PF01548 Transposase L0Z56_01435 PF00239 Resolvase, N terminal domain L0Z56_01435 PF02796 Helix-turn-helix domain of resolvase L0Z56_01475 PF01527 Transposase L0Z56_01485 PF13276 HTH-like domain L0Z56_01485 PF00665 Integrase core domain L0Z56_01485 PF13333 Integrase core domain L0Z56_01490 PF13276 HTH-like domain L0Z56_01490 PF00665 Integrase core domain L0Z56_01490 PF13333 Integrase core domain L0Z56_01495 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L0Z56_01495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L0Z56_01500 PF00115 Cytochrome C and Quinol oxidase polypeptide I L0Z56_01505 PF01040 UbiA prenyltransferase family L0Z56_01510 PF00075 RNase H L0Z56_01520 PF00118 TCP-1/cpn60 chaperonin family L0Z56_01525 PF00166 Chaperonin 10 Kd subunit L0Z56_01530 PF01571 Aminomethyltransferase folate-binding domain L0Z56_01535 PF01368 DHH family L0Z56_01535 PF17768 RecJ OB domain L0Z56_01535 PF02272 DHHA1 domain L0Z56_01550 PF00115 Cytochrome C and Quinol oxidase polypeptide I L0Z56_01560 PF05362 Lon protease (S16) C-terminal proteolytic domain L0Z56_01560 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_01560 PF02190 ATP-dependent protease La (LON) substrate-binding domain L0Z56_01565 PF07724 AAA domain (Cdc48 subfamily) L0Z56_01565 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z56_01565 PF06689 ClpX C4-type zinc finger L0Z56_01570 PF00574 Clp protease L0Z56_01575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L0Z56_01575 PF05698 Bacterial trigger factor protein (TF) C-terminus L0Z56_01575 PF05697 Bacterial trigger factor protein (TF) L0Z56_01585 PF04972 BON domain L0Z56_01590 PF02951 Prokaryotic glutathione synthetase, N-terminal domain L0Z56_01590 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain L0Z56_01595 PF04101 Glycosyltransferase family 28 C-terminal domain L0Z56_01595 PF03033 Glycosyltransferase family 28 N-terminal domain L0Z56_01605 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_01605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0Z56_01610 PF01548 Transposase L0Z56_01610 PF02371 Transposase IS116/IS110/IS902 family L0Z56_01640 PF01235 Sodium:alanine symporter family L0Z56_01655 PF02545 Maf-like protein L0Z56_01660 PF01176 Translation initiation factor 1A / IF-1 L0Z56_01675 PF00709 Adenylosuccinate synthetase L0Z56_01695 PF01578 Cytochrome C assembly protein L0Z56_01700 PF03618 Kinase/pyrophosphorylase L0Z56_01705 PF00444 Ribosomal protein L36 L0Z56_01725 PF13276 HTH-like domain L0Z56_01725 PF00665 Integrase core domain L0Z56_01725 PF13333 Integrase core domain L0Z56_01730 PF13276 HTH-like domain L0Z56_01730 PF00665 Integrase core domain L0Z56_01730 PF13333 Integrase core domain L0Z56_01735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L0Z56_01740 PF02661 Fic/DOC family L0Z56_01740 PF13784 Fic/DOC family N-terminal L0Z56_01745 PF13662 Toprim domain L0Z56_01745 PF08275 DNA primase catalytic core, N-terminal domain L0Z56_01745 PF01807 CHC2 zinc finger L0Z56_01755 PF08241 Methyltransferase domain L0Z56_01765 PF08264 Anticodon-binding domain of tRNA L0Z56_01765 PF09334 tRNA synthetases class I (M) L0Z56_01775 PF03796 DnaB-like helicase C terminal domain L0Z56_01775 PF00772 DnaB-like helicase N terminal domain L0Z56_01785 PF06271 RDD family L0Z56_01790 PF04002 RadC-like JAB domain L0Z56_01800 PF12705 PD-(D/E)XK nuclease superfamily L0Z56_01800 PF00580 UvrD/REP helicase N-terminal domain L0Z56_01800 PF13361 UvrD-like helicase C-terminal domain L0Z56_01805 PF08544 GHMP kinases C terminal L0Z56_01805 PF00288 GHMP kinases N terminal domain L0Z56_01815 PF00950 ABC 3 transport family L0Z56_01840 PF05173 Dihydrodipicolinate reductase, C-terminus L0Z56_01840 PF01113 Dihydrodipicolinate reductase, N-terminus L0Z56_01845 PF00005 ABC transporter L0Z56_01860 PF13276 HTH-like domain L0Z56_01860 PF00665 Integrase core domain L0Z56_01860 PF13333 Integrase core domain L0Z56_01865 PF13276 HTH-like domain L0Z56_01865 PF00665 Integrase core domain L0Z56_01865 PF13333 Integrase core domain L0Z56_01875 PF01769 Divalent cation transporter L0Z56_01875 PF03448 MgtE intracellular N domain L0Z56_01875 PF00571 CBS domain L0Z56_01880 PF02386 Cation transport protein L0Z56_01885 PF02386 Cation transport protein L0Z56_01900 PF00692 dUTPase L0Z56_01925 PF07690 Major Facilitator Superfamily L0Z56_01940 PF02779 Transketolase, pyrimidine binding domain L0Z56_01940 PF00456 Transketolase, thiamine diphosphate binding domain L0Z56_01940 PF02780 Transketolase, C-terminal domain L0Z56_01945 PF00163 Ribosomal protein S4/S9 N-terminal domain L0Z56_01945 PF01479 S4 domain L0Z56_01955 PF04384 Iron-sulphur cluster assembly L0Z56_01965 PF00830 Ribosomal L28 family L0Z56_01970 PF04055 Radical SAM superfamily L0Z56_01970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L0Z56_01975 PF01209 ubiE/COQ5 methyltransferase family L0Z56_01980 PF01098 Cell cycle protein L0Z56_01995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_02010 PF00664 ABC transporter transmembrane region L0Z56_02010 PF00005 ABC transporter L0Z56_02020 PF05746 DALR anticodon binding domain L0Z56_02020 PF00750 tRNA synthetases class I (R) L0Z56_02020 PF03485 Arginyl tRNA synthetase N terminal domain L0Z56_02050 PF00005 ABC transporter L0Z56_02060 PF00152 tRNA synthetases class II (D, K and N) L0Z56_02060 PF02938 GAD domain L0Z56_02060 PF01336 OB-fold nucleic acid binding domain L0Z56_02065 PF08946 Osmosensory transporter coiled coil L0Z56_02065 PF00083 Sugar (and other) transporter L0Z56_02070 PF00849 RNA pseudouridylate synthase L0Z56_02070 PF01479 S4 domain L0Z56_02075 PF00676 Dehydrogenase E1 component L0Z56_02080 PF03653 Uncharacterised protein family (UPF0093) L0Z56_02090 PF00919 Uncharacterized protein family UPF0004 L0Z56_02090 PF04055 Radical SAM superfamily L0Z56_02090 PF01938 TRAM domain L0Z56_02100 PF00854 POT family L0Z56_02105 PF00133 tRNA synthetases class I (I, L, M and V) L0Z56_02105 PF08264 Anticodon-binding domain of tRNA L0Z56_02115 PF03483 B3/4 domain L0Z56_02115 PF03147 Ferredoxin-fold anticodon binding domain L0Z56_02115 PF01588 Putative tRNA binding domain L0Z56_02115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L0Z56_02115 PF03484 tRNA synthetase B5 domain L0Z56_02125 PF00119 ATP synthase A chain L0Z56_02130 PF00137 ATP synthase subunit C L0Z56_02150 PF02628 Cytochrome oxidase assembly protein L0Z56_02155 PF00289 Biotin carboxylase, N-terminal domain L0Z56_02155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0Z56_02155 PF18140 Propionyl-coenzyme A carboxylase BT domain L0Z56_02155 PF02785 Biotin carboxylase C-terminal domain L0Z56_02155 PF00364 Biotin-requiring enzyme L0Z56_02165 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0Z56_02170 PF00890 FAD binding domain L0Z56_02170 PF02910 Fumarate reductase flavoprotein C-term L0Z56_02180 PF00625 Guanylate kinase L0Z56_02200 PF01926 50S ribosome-binding GTPase L0Z56_02200 PF06071 Protein of unknown function (DUF933) L0Z56_02210 PF01743 Poly A polymerase head domain L0Z56_02210 PF12627 Probable RNA and SrmB- binding site of polymerase A L0Z56_02210 PF13735 tRNA nucleotidyltransferase domain 2 putative L0Z56_02235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L0Z56_02235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L0Z56_02240 PF00902 Sec-independent protein translocase protein (TatC) L0Z56_02245 PF01316 Arginine repressor, DNA binding domain L0Z56_02245 PF02863 Arginine repressor, C-terminal domain L0Z56_02250 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0Z56_02255 PF00528 Binding-protein-dependent transport system inner membrane component L0Z56_02260 PF00005 ABC transporter L0Z56_02285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L0Z56_02300 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_02300 PF17862 AAA+ lid domain L0Z56_02300 PF06480 FtsH Extracellular L0Z56_02300 PF01434 Peptidase family M41 L0Z56_02305 PF00133 tRNA synthetases class I (I, L, M and V) L0Z56_02305 PF08264 Anticodon-binding domain of tRNA L0Z56_02325 PF00117 Glutamine amidotransferase class-I L0Z56_02325 PF06418 CTP synthase N-terminus L0Z56_02330 PF14437 MafB19-like deaminase L0Z56_02335 PF07690 Major Facilitator Superfamily L0Z56_02335 PF00083 Sugar (and other) transporter L0Z56_02345 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_02345 PF06480 FtsH Extracellular L0Z56_02345 PF01434 Peptidase family M41 L0Z56_02345 PF17862 AAA+ lid domain L0Z56_02350 PF00364 Biotin-requiring enzyme L0Z56_02350 PF02779 Transketolase, pyrimidine binding domain L0Z56_02350 PF02780 Transketolase, C-terminal domain L0Z56_02360 PF00009 Elongation factor Tu GTP binding domain L0Z56_02360 PF14492 Elongation Factor G, domain II L0Z56_02360 PF00679 Elongation factor G C-terminus L0Z56_02360 PF06421 GTP-binding protein LepA C-terminus L0Z56_02360 PF03144 Elongation factor Tu domain 2 L0Z56_02385 PF01476 LysM domain L0Z56_02385 PF08525 Opacity-associated protein A N-terminal motif L0Z56_02385 PF01551 Peptidase family M23 L0Z56_02390 PF01709 Transcriptional regulator L0Z56_02395 PF13525 Outer membrane lipoprotein L0Z56_02405 PF01066 CDP-alcohol phosphatidyltransferase L0Z56_02410 PF01515 Phosphate acetyl/butaryl transferase L0Z56_02410 PF03949 Malic enzyme, NAD binding domain L0Z56_02410 PF00390 Malic enzyme, N-terminal domain L0Z56_02425 PF00462 Glutaredoxin L0Z56_02430 PF10415 Fumarase C C-terminus L0Z56_02430 PF00206 Lyase L0Z56_02440 PF01018 GTP1/OBG L0Z56_02440 PF01926 50S ribosome-binding GTPase L0Z56_02445 PF03952 Enolase, N-terminal domain L0Z56_02445 PF00113 Enolase, C-terminal TIM barrel domain L0Z56_02450 PF01225 Mur ligase family, catalytic domain L0Z56_02450 PF02875 Mur ligase family, glutamate ligase domain L0Z56_02450 PF08245 Mur ligase middle domain L0Z56_02455 PF03330 Lytic transglycolase L0Z56_02480 PF04055 Radical SAM superfamily L0Z56_02480 PF00919 Uncharacterized protein family UPF0004 L0Z56_02485 PF01425 Amidase L0Z56_02490 PF01348 Type II intron maturase L0Z56_02490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_02510 PF08676 MutL C terminal dimerisation domain L0Z56_02510 PF01119 DNA mismatch repair protein, C-terminal domain L0Z56_02550 PF01348 Type II intron maturase L0Z56_02550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_02565 PF01527 Transposase L0Z56_02570 PF13276 HTH-like domain L0Z56_02570 PF00665 Integrase core domain L0Z56_02570 PF13333 Integrase core domain L0Z56_02575 PF13276 HTH-like domain L0Z56_02575 PF00665 Integrase core domain L0Z56_02575 PF13333 Integrase core domain L0Z56_02595 PF01467 Cytidylyltransferase-like L0Z56_02610 PF01255 Putative undecaprenyl diphosphate synthase L0Z56_02620 PF01765 Ribosome recycling factor L0Z56_02625 PF00696 Amino acid kinase family L0Z56_02630 PF00889 Elongation factor TS L0Z56_02635 PF00318 Ribosomal protein S2 L0Z56_02645 PF02699 Preprotein translocase subunit L0Z56_02650 PF01380 SIS domain L0Z56_02665 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_02685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L0Z56_02685 PF01565 FAD binding domain L0Z56_02690 PF03900 Porphobilinogen deaminase, C-terminal domain L0Z56_02690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L0Z56_02695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L0Z56_02695 PF00364 Biotin-requiring enzyme L0Z56_02695 PF02817 e3 binding domain L0Z56_02720 PF02810 SEC-C motif L0Z56_02720 PF01043 SecA preprotein cross-linking domain L0Z56_02720 PF07516 SecA Wing and Scaffold domain L0Z56_02720 PF07517 SecA DEAD-like domain L0Z56_02730 PF00923 Transaldolase/Fructose-6-phosphate aldolase L0Z56_02745 PF13333 Integrase core domain L0Z56_02745 PF13276 HTH-like domain L0Z56_02745 PF00665 Integrase core domain L0Z56_02755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L0Z56_02755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L0Z56_02760 PF02441 Flavoprotein L0Z56_02765 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) L0Z56_02770 PF01595 Cyclin M transmembrane N-terminal domain L0Z56_02770 PF03471 Transporter associated domain L0Z56_02770 PF00571 CBS domain L0Z56_02775 PF00202 Aminotransferase class-III L0Z56_02780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L0Z56_02795 PF01609 Transposase DDE domain L0Z56_02805 PF01734 Patatin-like phospholipase L0Z56_02945 PF18755 Restriction Enzyme Adenine Methylase Associated L0Z56_02945 PF01555 DNA methylase L0Z56_02955 PF00023 Ankyrin repeat L0Z56_03010 PF01348 Type II intron maturase L0Z56_03010 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_03020 PF00176 SNF2 family N-terminal domain L0Z56_03020 PF12419 SNF2 Helicase protein L0Z56_03020 PF00271 Helicase conserved C-terminal domain L0Z56_03025 PF12804 MobA-like NTP transferase domain L0Z56_03025 PF14602 Hexapeptide repeat of succinyl-transferase L0Z56_03025 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z56_03030 PF16363 GDP-mannose 4,6 dehydratase L0Z56_03050 PF00664 ABC transporter transmembrane region L0Z56_03050 PF00005 ABC transporter L0Z56_03055 PF01212 Beta-eliminating lyase L0Z56_03060 PF01212 Beta-eliminating lyase L0Z56_03070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L0Z56_03070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L0Z56_03070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L0Z56_03075 PF00892 EamA-like transporter family L0Z56_03095 PF04002 RadC-like JAB domain L0Z56_03100 PF01381 Helix-turn-helix L0Z56_03135 PF02796 Helix-turn-helix domain of resolvase L0Z56_03135 PF00239 Resolvase, N terminal domain L0Z56_03205 PF00665 Integrase core domain L0Z56_03205 PF13276 HTH-like domain L0Z56_03205 PF13333 Integrase core domain L0Z56_03210 PF01527 Transposase L0Z56_03215 PF00529 HlyD membrane-fusion protein of T1SS L0Z56_03215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L0Z56_03235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L0Z56_03235 PF00925 GTP cyclohydrolase II L0Z56_03240 PF03449 Transcription elongation factor, N-terminal L0Z56_03240 PF01272 Transcription elongation factor, GreA/GreB, C-term L0Z56_03245 PF02874 ATP synthase alpha/beta family, beta-barrel domain L0Z56_03245 PF00306 ATP synthase alpha/beta chain, C terminal domain L0Z56_03245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z56_03250 PF00213 ATP synthase delta (OSCP) subunit L0Z56_03255 PF02021 Uncharacterised protein family UPF0102 L0Z56_03260 PF01196 Ribosomal protein L17 L0Z56_03265 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L0Z56_03265 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L0Z56_03265 PF01000 RNA polymerase Rpb3/RpoA insert domain L0Z56_03270 PF00411 Ribosomal protein S11 L0Z56_03275 PF00416 Ribosomal protein S13/S18 L0Z56_03285 PF00344 SecY translocase L0Z56_03290 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L0Z56_03295 PF03719 Ribosomal protein S5, C-terminal domain L0Z56_03295 PF00333 Ribosomal protein S5, N-terminal domain L0Z56_03300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L0Z56_03305 PF00347 Ribosomal protein L6 L0Z56_03310 PF00410 Ribosomal protein S8 L0Z56_03315 PF00253 Ribosomal protein S14p/S29e L0Z56_03320 PF00281 Ribosomal protein L5 L0Z56_03320 PF00673 ribosomal L5P family C-terminus L0Z56_03325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L0Z56_03330 PF00238 Ribosomal protein L14p/L23e L0Z56_03335 PF00366 Ribosomal protein S17 L0Z56_03340 PF00831 Ribosomal L29 protein L0Z56_03345 PF00252 Ribosomal protein L16p/L10e L0Z56_03350 PF00189 Ribosomal protein S3, C-terminal domain L0Z56_03350 PF07650 KH domain L0Z56_03355 PF00237 Ribosomal protein L22p/L17e L0Z56_03360 PF00203 Ribosomal protein S19 L0Z56_03365 PF00181 Ribosomal Proteins L2, RNA binding domain L0Z56_03365 PF03947 Ribosomal Proteins L2, C-terminal domain L0Z56_03370 PF00276 Ribosomal protein L23 L0Z56_03375 PF00573 Ribosomal protein L4/L1 family L0Z56_03380 PF00297 Ribosomal protein L3 L0Z56_03385 PF00338 Ribosomal protein S10p/S20e L0Z56_03390 PF00009 Elongation factor Tu GTP binding domain L0Z56_03390 PF03144 Elongation factor Tu domain 2 L0Z56_03390 PF03143 Elongation factor Tu C-terminal domain L0Z56_03405 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L0Z56_03405 PF00117 Glutamine amidotransferase class-I L0Z56_03420 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L0Z56_03435 PF00391 PEP-utilising enzyme, mobile domain L0Z56_03435 PF02896 PEP-utilising enzyme, TIM barrel domain L0Z56_03435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L0Z56_03450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_03460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L0Z56_03460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L0Z56_03460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L0Z56_03460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L0Z56_03480 PF01548 Transposase L0Z56_03480 PF02371 Transposase IS116/IS110/IS902 family L0Z56_03485 PF00814 Glycoprotease family L0Z56_03500 PF00266 Aminotransferase class-V L0Z56_03505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L0Z56_03515 PF00005 ABC transporter L0Z56_03520 PF01521 Iron-sulphur cluster biosynthesis L0Z56_03525 PF13286 Phosphohydrolase-associated domain L0Z56_03525 PF01966 HD domain L0Z56_03530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L0Z56_03530 PF01872 RibD C-terminal domain L0Z56_03540 PF00834 Ribulose-phosphate 3 epimerase family L0Z56_03550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal L0Z56_03550 PF14602 Hexapeptide repeat of succinyl-transferase L0Z56_03550 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z56_03575 PF03717 Penicillin-binding Protein dimerisation domain L0Z56_03575 PF00905 Penicillin binding protein transpeptidase domain L0Z56_03580 PF03422 Carbohydrate binding module (family 6) L0Z56_03580 PF01522 Polysaccharide deacetylase L0Z56_03580 PF00457 Glycosyl hydrolases family 11 L0Z56_03585 PF13335 Magnesium chelatase, subunit ChlI C-terminal L0Z56_03585 PF01078 Magnesium chelatase, subunit ChlI L0Z56_03595 PF00091 Tubulin/FtsZ family, GTPase domain L0Z56_03595 PF12327 FtsZ family, C-terminal domain L0Z56_03610 PF02130 Uncharacterized protein family UPF0054 L0Z56_03615 PF13085 2Fe-2S iron-sulfur cluster binding domain L0Z56_03630 PF04608 Phosphatidylglycerophosphatase A L0Z56_03635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L0Z56_03635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L0Z56_03640 PF00072 Response regulator receiver domain L0Z56_03640 PF00486 Transcriptional regulatory protein, C terminal L0Z56_03660 PF01702 Queuine tRNA-ribosyltransferase L0Z56_03670 PF00675 Insulinase (Peptidase family M16) L0Z56_03670 PF05193 Peptidase M16 inactive domain L0Z56_03675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L0Z56_03675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L0Z56_03680 PF01654 Cytochrome bd terminal oxidase subunit I L0Z56_03685 PF02322 Cytochrome bd terminal oxidase subunit II L0Z56_03690 PF01926 50S ribosome-binding GTPase L0Z56_03690 PF07650 KH domain L0Z56_03735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0Z56_03735 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_03740 PF00589 Phage integrase family L0Z56_03740 PF02899 Phage integrase, N-terminal SAM-like domain L0Z56_03755 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_03760 PF00578 AhpC/TSA family L0Z56_03760 PF10417 C-terminal domain of 1-Cys peroxiredoxin L0Z56_03770 PF00462 Glutaredoxin L0Z56_03775 PF06574 FAD synthetase L0Z56_03775 PF01687 Riboflavin kinase L0Z56_03780 PF01252 Signal peptidase (SPase) II L0Z56_03785 PF05193 Peptidase M16 inactive domain L0Z56_03785 PF00675 Insulinase (Peptidase family M16) L0Z56_03795 PF00551 Formyl transferase L0Z56_03815 PF01668 SmpB protein L0Z56_03820 PF01790 Prolipoprotein diacylglyceryl transferase L0Z56_03825 PF00005 ABC transporter L0Z56_03825 PF00664 ABC transporter transmembrane region L0Z56_03850 PF00436 Single-strand binding protein family L0Z56_03855 PF00701 Dihydrodipicolinate synthetase family L0Z56_03860 PF01653 NAD-dependent DNA ligase adenylation domain L0Z56_03860 PF03120 NAD-dependent DNA ligase OB-fold domain L0Z56_03860 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L0Z56_03860 PF12826 Helix-hairpin-helix motif L0Z56_03860 PF00533 BRCA1 C Terminus (BRCT) domain L0Z56_03865 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0Z56_03870 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0Z56_03870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0Z56_03870 PF02811 PHP domain L0Z56_03870 PF14579 Helix-hairpin-helix motif L0Z56_03875 PF01250 Ribosomal protein S6 L0Z56_03880 PF01084 Ribosomal protein S18 L0Z56_03885 PF03948 Ribosomal protein L9, C-terminal domain L0Z56_03885 PF01281 Ribosomal protein L9, N-terminal domain L0Z56_03900 PF10397 Adenylosuccinate lyase C-terminus L0Z56_03900 PF00206 Lyase L0Z56_03910 PF13685 Iron-containing alcohol dehydrogenase L0Z56_03915 PF01546 Peptidase family M20/M25/M40 L0Z56_03915 PF07687 Peptidase dimerisation domain L0Z56_03920 PF00730 HhH-GPD superfamily base excision DNA repair protein L0Z56_03920 PF00633 Helix-hairpin-helix motif L0Z56_03920 PF10576 Iron-sulfur binding domain of endonuclease III L0Z56_03930 PF18324 Hypothetical protein TT1725 L0Z56_03930 PF00180 Isocitrate/isopropylmalate dehydrogenase L0Z56_03945 PF07497 Rho termination factor, RNA-binding domain L0Z56_03945 PF07498 Rho termination factor, N-terminal domain L0Z56_03945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z56_03955 PF00639 PPIC-type PPIASE domain L0Z56_03960 PF00886 Ribosomal protein S16 L0Z56_03965 PF00348 Polyprenyl synthetase L0Z56_03970 PF01025 GrpE L0Z56_03975 PF00579 tRNA synthetases class I (W and Y) L0Z56_03985 PF00034 Cytochrome c L0Z56_04015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z56_04015 PF03129 Anticodon binding domain L0Z56_04020 PF01648 4'-phosphopantetheinyl transferase superfamily L0Z56_04030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z56_04030 PF00361 Proton-conducting membrane transporter L0Z56_04030 PF13244 Domain of unknown function (DUF4040) L0Z56_04050 PF01300 Telomere recombination L0Z56_04070 PF00271 Helicase conserved C-terminal domain L0Z56_04070 PF00270 DEAD/DEAH box helicase L0Z56_04070 PF17191 RecG wedge domain L0Z56_04110 PF01145 SPFH domain / Band 7 family L0Z56_04115 PF01145 SPFH domain / Band 7 family L0Z56_04120 PF13180 PDZ domain L0Z56_04145 PF17757 UvrB interaction domain L0Z56_04145 PF12344 Ultra-violet resistance protein B L0Z56_04145 PF02151 UvrB/uvrC motif L0Z56_04145 PF04851 Type III restriction enzyme, res subunit L0Z56_04145 PF00271 Helicase conserved C-terminal domain L0Z56_04165 PF03918 Cytochrome C biogenesis protein L0Z56_04175 PF00111 2Fe-2S iron-sulfur cluster binding domain L0Z56_04185 PF08245 Mur ligase middle domain L0Z56_04210 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z56_04215 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z56_04220 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z56_04225 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z56_04230 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L0Z56_04240 PF01921 tRNA synthetases class I (K) L0Z56_04255 PF02272 DHHA1 domain L0Z56_04255 PF01411 tRNA synthetases class II (A) L0Z56_04255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0Z56_04265 PF01632 Ribosomal protein L35 L0Z56_04270 PF00453 Ribosomal protein L20 L0Z56_04275 PF00551 Formyl transferase L0Z56_04275 PF02911 Formyl transferase, C-terminal domain L0Z56_04280 PF01808 AICARFT/IMPCHase bienzyme L0Z56_04280 PF02142 MGS-like domain L0Z56_04290 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L0Z56_04290 PF01676 Metalloenzyme superfamily L0Z56_04295 PF00698 Acyl transferase domain L0Z56_04300 PF01197 Ribosomal protein L31 L0Z56_04305 PF01513 ATP-NAD kinase L0Z56_04320 PF00665 Integrase core domain L0Z56_04320 PF13333 Integrase core domain L0Z56_04320 PF13276 HTH-like domain L0Z56_04360 PF00085 Thioredoxin L0Z56_04370 PF03070 TENA/THI-4/PQQC family L0Z56_04380 PF00809 Pterin binding enzyme L0Z56_04380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L0Z56_04385 PF00809 Pterin binding enzyme L0Z56_04385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L0Z56_04390 PF00186 Dihydrofolate reductase L0Z56_04400 PF18073 Rubredoxin metal binding domain L0Z56_04405 PF00448 SRP54-type protein, GTPase domain L0Z56_04405 PF02881 SRP54-type protein, helical bundle domain L0Z56_04410 PF01592 NifU-like N terminal domain L0Z56_04415 PF01521 Iron-sulphur cluster biosynthesis L0Z56_04420 PF07743 HSCB C-terminal oligomerisation domain L0Z56_04425 PF00012 Hsp70 protein L0Z56_04430 PF10502 Signal peptidase, peptidase S26 L0Z56_04435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L0Z56_04435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L0Z56_04480 PF16198 tRNA pseudouridylate synthase B C-terminal domain L0Z56_04480 PF01509 TruB family pseudouridylate synthase (N terminal domain) L0Z56_04485 PF00312 Ribosomal protein S15 L0Z56_04490 PF00013 KH domain L0Z56_04490 PF00575 S1 RNA binding domain L0Z56_04490 PF03725 3' exoribonuclease family, domain 2 L0Z56_04490 PF01138 3' exoribonuclease family, domain 1 L0Z56_04490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L0Z56_04520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L0Z56_04520 PF00586 AIR synthase related protein, N-terminal domain L0Z56_04520 PF02769 AIR synthase related protein, C-terminal domain L0Z56_04535 PF17760 UvrA interaction domain L0Z56_04535 PF17755 UvrA DNA-binding domain L0Z56_04570 PF08245 Mur ligase middle domain L0Z56_04570 PF02875 Mur ligase family, glutamate ligase domain L0Z56_04575 PF01053 Cys/Met metabolism PLP-dependent enzyme L0Z56_04585 PF00012 Hsp70 protein L0Z56_04590 PF10150 Ribonuclease E/G family L0Z56_04590 PF00575 S1 RNA binding domain L0Z56_04590 PF12111 Polyribonucleotide phosphorylase C terminal L0Z56_04595 PF00471 Ribosomal protein L33 L0Z56_04625 PF01297 Zinc-uptake complex component A periplasmic L0Z56_04630 PF00005 ABC transporter L0Z56_04635 PF03109 ABC1 family L0Z56_04685 PF00107 Zinc-binding dehydrogenase L0Z56_04685 PF08240 Alcohol dehydrogenase GroES-like domain L0Z56_04690 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 L0Z56_04695 PF01027 Inhibitor of apoptosis-promoting Bax1 L0Z56_04700 PF08032 RNA 2'-O ribose methyltransferase substrate binding L0Z56_04700 PF00588 SpoU rRNA Methylase family L0Z56_04710 PF02774 Semialdehyde dehydrogenase, dimerisation domain L0Z56_04710 PF01118 Semialdehyde dehydrogenase, NAD binding domain L0Z56_04730 PF13520 Amino acid permease L0Z56_04750 PF01842 ACT domain L0Z56_04750 PF00696 Amino acid kinase family L0Z56_04750 PF13840 ACT domain L0Z56_04765 PF00580 UvrD/REP helicase N-terminal domain L0Z56_04765 PF13361 UvrD-like helicase C-terminal domain L0Z56_04775 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L0Z56_04780 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L0Z56_04785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z56_04785 PF00361 Proton-conducting membrane transporter L0Z56_04790 PF00361 Proton-conducting membrane transporter L0Z56_04795 PF00361 Proton-conducting membrane transporter L0Z56_04800 PF08279 HTH domain L0Z56_04800 PF03099 Biotin/lipoate A/B protein ligase family L0Z56_04800 PF02237 Biotin protein ligase C terminal domain L0Z56_04800 PF03099 Biotin/lipoate A/B protein ligase family L0Z56_04800 PF02237 Biotin protein ligase C terminal domain L0Z56_04800 PF08279 HTH domain L0Z56_04810 PF03100 CcmE L0Z56_04840 PF10531 SLBB domain L0Z56_04840 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0Z56_04840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0Z56_04845 PF05198 Translation initiation factor IF-3, N-terminal domain L0Z56_04845 PF00707 Translation initiation factor IF-3, C-terminal domain L0Z56_04850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0Z56_04850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z56_04850 PF03129 Anticodon binding domain L0Z56_04860 PF12838 4Fe-4S dicluster domain L0Z56_04865 PF01926 50S ribosome-binding GTPase L0Z56_04865 PF12631 MnmE helical domain L0Z56_04865 PF10396 GTP-binding protein TrmE N-terminus L0Z56_04875 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_04885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L0Z56_04885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L0Z56_04890 PF02504 Fatty acid synthesis protein L0Z56_04895 PF01783 Ribosomal L32p protein family L0Z56_04900 PF02405 Permease MlaE L0Z56_04905 PF00005 ABC transporter L0Z56_04915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L0Z56_04915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L0Z56_04915 PF13288 DXP reductoisomerase C-terminal domain L0Z56_04930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_04940 PF00266 Aminotransferase class-V L0Z56_04950 PF01523 Putative modulator of DNA gyrase L0Z56_04980 PF00476 DNA polymerase family A L0Z56_04980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L0Z56_04980 PF01367 5'-3' exonuclease, C-terminal SAM fold L0Z56_04985 PF13333 Integrase core domain L0Z56_04985 PF00665 Integrase core domain L0Z56_04985 PF13276 HTH-like domain L0Z56_04990 PF00665 Integrase core domain L0Z56_04990 PF13333 Integrase core domain L0Z56_04990 PF13276 HTH-like domain L0Z56_05020 PF01321 Creatinase/Prolidase N-terminal domain L0Z56_05020 PF00557 Metallopeptidase family M24 L0Z56_05025 PF01134 Glucose inhibited division protein A L0Z56_05025 PF13932 GidA associated domain L0Z56_05035 PF03023 Lipid II flippase MurJ L0Z56_05045 PF04860 Phage portal protein L0Z56_05060 PF03099 Biotin/lipoate A/B protein ligase family L0Z56_05065 PF17676 LD-carboxypeptidase C-terminal domain L0Z56_05065 PF02016 LD-carboxypeptidase N-terminal domain L0Z56_05080 PF00528 Binding-protein-dependent transport system inner membrane component L0Z56_05090 PF01245 Ribosomal protein L19 L0Z56_05095 PF01746 tRNA (Guanine-1)-methyltransferase L0Z56_05100 PF01259 SAICAR synthetase L0Z56_05105 PF00586 AIR synthase related protein, N-terminal domain L0Z56_05105 PF02769 AIR synthase related protein, C-terminal domain L0Z56_05120 PF00571 CBS domain L0Z56_05120 PF03471 Transporter associated domain L0Z56_05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) L0Z56_05130 PF00155 Aminotransferase class I and II L0Z56_05160 PF00464 Serine hydroxymethyltransferase L0Z56_05190 PF01545 Cation efflux family L0Z56_05200 PF02660 Glycerol-3-phosphate acyltransferase L0Z56_05205 PF01235 Sodium:alanine symporter family L0Z56_05210 PF01235 Sodium:alanine symporter family L0Z56_05215 PF01066 CDP-alcohol phosphatidyltransferase L0Z56_05220 PF02666 Phosphatidylserine decarboxylase L0Z56_05225 PF00154 recA bacterial DNA recombination protein L0Z56_05230 PF00684 DnaJ central domain L0Z56_05230 PF00226 DnaJ domain L0Z56_05230 PF01556 DnaJ C terminal domain L0Z56_05235 PF02875 Mur ligase family, glutamate ligase domain L0Z56_05235 PF08245 Mur ligase middle domain L0Z56_05250 PF03364 Polyketide cyclase / dehydrase and lipid transport L0Z56_05255 PF13462 Thioredoxin L0Z56_05285 PF12169 DNA polymerase III subunits gamma and tau domain III L0Z56_05290 PF02575 YbaB/EbfC DNA-binding family L0Z56_05295 PF13505 Outer membrane protein beta-barrel domain L0Z56_05300 PF04545 Sigma-70, region 4 L0Z56_05300 PF00140 Sigma-70 factor, region 1.2 L0Z56_05300 PF04542 Sigma-70 region 2 L0Z56_05310 PF00712 DNA polymerase III beta subunit, N-terminal domain L0Z56_05310 PF02767 DNA polymerase III beta subunit, central domain L0Z56_05310 PF02768 DNA polymerase III beta subunit, C-terminal domain L0Z56_05315 PF01416 tRNA pseudouridine synthase L0Z56_05325 PF00033 Cytochrome b/b6/petB L0Z56_05325 PF02167 Cytochrome C1 family L0Z56_05325 PF00032 Cytochrome b(C-terminal)/b6/petD L0Z56_05330 PF00032 Cytochrome b(C-terminal)/b6/petD L0Z56_05330 PF00033 Cytochrome b/b6/petB L0Z56_05335 PF01556 DnaJ C terminal domain L0Z56_05335 PF00684 DnaJ central domain L0Z56_05335 PF00226 DnaJ domain L0Z56_05345 PF00226 DnaJ domain L0Z56_05345 PF01556 DnaJ C terminal domain L0Z56_05345 PF00684 DnaJ central domain L0Z56_05355 PF03129 Anticodon binding domain L0Z56_05355 PF13393 Histidyl-tRNA synthetase L0Z56_05360 PF01975 Survival protein SurE L0Z56_05365 PF02978 Signal peptide binding domain L0Z56_05365 PF02881 SRP54-type protein, helical bundle domain L0Z56_05365 PF00448 SRP54-type protein, GTPase domain L0Z56_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_05380 PF07977 FabA-like domain L0Z56_05390 PF01103 Surface antigen L0Z56_05390 PF07244 Surface antigen variable number repeat L0Z56_05395 PF17820 PDZ domain L0Z56_05395 PF02163 Peptidase family M50 L0Z56_05410 PF00216 Bacterial DNA-binding protein L0Z56_05415 PF00575 S1 RNA binding domain L0Z56_05420 PF02390 Putative methyltransferase L0Z56_05430 PF01258 Prokaryotic dksA/traR C4-type zinc finger L0Z56_05445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L0Z56_05445 PF01926 50S ribosome-binding GTPase L0Z56_05455 PF03232 Ubiquinone biosynthesis protein COQ7 L0Z56_05465 PF00953 Glycosyl transferase family 4 L0Z56_05470 PF01351 Ribonuclease HII L0Z56_05490 PF00361 Proton-conducting membrane transporter L0Z56_05495 PF01098 Cell cycle protein L0Z56_05500 PF00156 Phosphoribosyl transferase domain L0Z56_05500 PF13537 Glutamine amidotransferase domain L0Z56_05505 PF02245 Methylpurine-DNA glycosylase (MPG) L0Z56_05515 PF17864 RuvB AAA lid domain L0Z56_05515 PF05491 RuvB C-terminal winged helix domain L0Z56_05515 PF05496 Holliday junction DNA helicase RuvB P-loop domain L0Z56_05520 PF07499 RuvA, C-terminal domain L0Z56_05520 PF01330 RuvA N terminal domain L0Z56_05545 PF00579 tRNA synthetases class I (W and Y) L0Z56_05565 PF00293 NUDIX domain L0Z56_05570 PF01026 TatD related DNase L0Z56_05575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L0Z56_05575 PF00056 lactate/malate dehydrogenase, NAD binding domain L0Z56_05580 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L0Z56_05585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L0Z56_05590 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L0Z56_05595 PF01230 HIT domain L0Z56_05610 PF01225 Mur ligase family, catalytic domain L0Z56_05610 PF02875 Mur ligase family, glutamate ligase domain L0Z56_05610 PF08245 Mur ligase middle domain L0Z56_05615 PF08338 Domain of unknown function (DUF1731) L0Z56_05615 PF01370 NAD dependent epimerase/dehydratase family L0Z56_05630 PF01131 DNA topoisomerase L0Z56_05630 PF13368 Topoisomerase C-terminal repeat L0Z56_05630 PF01396 Topoisomerase DNA binding C4 zinc finger L0Z56_05630 PF01751 Toprim domain L0Z56_05635 PF00581 Rhodanese-like domain L0Z56_05635 PF17773 UPF0176 acylphosphatase like domain L0Z56_05640 PF00528 Binding-protein-dependent transport system inner membrane component L0Z56_05650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z56_05665 PF04379 ApaG domain L0Z56_05670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L0Z56_05670 PF02222 ATP-grasp domain L0Z56_05675 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L0Z56_05675 PF02542 YgbB family L0Z56_05680 PF01594 AI-2E family transporter L0Z56_05690 PF00589 Phage integrase family L0Z56_05690 PF02899 Phage integrase, N-terminal SAM-like domain L0Z56_05705 PF01649 Ribosomal protein S20 L0Z56_05710 PF00285 Citrate synthase, C-terminal domain L0Z56_05730 PF01039 Carboxyl transferase domain L0Z56_05740 PF06827 Zinc finger found in FPG and IleRS L0Z56_05740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L0Z56_05740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L0Z56_05745 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L0Z56_05745 PF01243 Pyridoxamine 5'-phosphate oxidase L0Z56_05755 PF03772 Competence protein L0Z56_05755 PF00753 Metallo-beta-lactamase superfamily L0Z56_05765 PF00849 RNA pseudouridylate synthase L0Z56_05765 PF01479 S4 domain L0Z56_05770 PF01219 Prokaryotic diacylglycerol kinase L0Z56_05790 PF00162 Phosphoglycerate kinase L0Z56_05800 PF03060 Nitronate monooxygenase L0Z56_05815 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L0Z56_05835 PF02817 e3 binding domain L0Z56_05835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L0Z56_05835 PF00364 Biotin-requiring enzyme L0Z56_05850 PF02132 RecR protein L0Z56_05850 PF13662 Toprim domain L0Z56_05860 PF00334 Nucleoside diphosphate kinase L0Z56_05875 PF00762 Ferrochelatase L0Z56_05890 PF00227 Proteasome subunit L0Z56_05895 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_05895 PF07724 AAA domain (Cdc48 subfamily) L0Z56_05895 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z56_05905 PF00348 Polyprenyl synthetase L0Z56_05910 PF00550 Phosphopantetheine attachment site L0Z56_05915 PF00109 Beta-ketoacyl synthase, N-terminal domain L0Z56_05915 PF02801 Beta-ketoacyl synthase, C-terminal domain L0Z56_05930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0Z56_05935 PF02511 Thymidylate synthase complementing protein L0Z56_05945 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L0Z56_05945 PF18074 Primosomal protein N C-terminal domain L0Z56_05945 PF17764 3′ DNA-binding domain (3′BD) L0Z56_05945 PF00271 Helicase conserved C-terminal domain L0Z56_05945 PF00270 DEAD/DEAH box helicase L0Z56_05950 PF00355 Rieske [2Fe-2S] domain L0Z56_05950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal L0Z56_05955 PF03989 DNA gyrase C-terminal domain, beta-propeller L0Z56_05955 PF00521 DNA gyrase/topoisomerase IV, subunit A L0Z56_05985 PF02632 BioY family L0Z56_05990 PF00881 Nitroreductase family L0Z56_05995 PF01678 Diaminopimelate epimerase L0Z56_06000 PF02629 CoA binding domain L0Z56_06000 PF00549 CoA-ligase L0Z56_06005 PF00549 CoA-ligase L0Z56_06005 PF08442 ATP-grasp domain L0Z56_06020 PF04452 RNA methyltransferase L0Z56_06035 PF01218 Coproporphyrinogen III oxidase L0Z56_06045 PF13614 AAA domain L0Z56_06050 PF17762 HTH domain found in ParB protein L0Z56_06050 PF02195 ParB-like nuclease domain L0Z56_06070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L0Z56_06075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L0Z56_06085 PF00483 Nucleotidyl transferase L0Z56_06085 PF01050 Mannose-6-phosphate isomerase L0Z56_06095 PF01050 Mannose-6-phosphate isomerase L0Z56_06095 PF00483 Nucleotidyl transferase L0Z56_06105 PF12704 MacB-like periplasmic core domain L0Z56_06105 PF02687 FtsX-like permease family L0Z56_06125 PF00231 ATP synthase L0Z56_06130 PF01523 Putative modulator of DNA gyrase L0Z56_06135 PF00313 'Cold-shock' DNA-binding domain L0Z56_06140 PF00271 Helicase conserved C-terminal domain L0Z56_06140 PF00270 DEAD/DEAH box helicase L0Z56_06145 PF17871 AAA lid domain L0Z56_06145 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z56_06145 PF02861 Clp amino terminal domain, pathogenicity island component L0Z56_06145 PF07724 AAA domain (Cdc48 subfamily) L0Z56_06145 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_06150 PF01791 DeoC/LacD family aldolase L0Z56_06160 PF01180 Dihydroorotate dehydrogenase L0Z56_06165 PF00035 Double-stranded RNA binding motif L0Z56_06165 PF14622 Ribonuclease-III-like L0Z56_06180 PF13091 PLD-like domain L0Z56_06205 PF00210 Ferritin-like domain L0Z56_06215 PF00999 Sodium/hydrogen exchanger family L0Z56_06215 PF02254 TrkA-N domain L0Z56_06225 PF02223 Thymidylate kinase L0Z56_06235 PF01434 Peptidase family M41 L0Z56_06235 PF06480 FtsH Extracellular L0Z56_06235 PF00004 ATPase family associated with various cellular activities (AAA) L0Z56_06235 PF17862 AAA+ lid domain L0Z56_06240 PF01171 PP-loop family L0Z56_06245 PF00691 OmpA family L0Z56_06275 PF00719 Inorganic pyrophosphatase L0Z56_06290 PF00639 PPIC-type PPIASE domain L0Z56_06290 PF09312 SurA N-terminal domain L0Z56_06295 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z56_06325 PF03717 Penicillin-binding Protein dimerisation domain L0Z56_06325 PF00905 Penicillin binding protein transpeptidase domain L0Z56_06330 PF02401 LytB protein L0Z56_06340 PF00183 Hsp90 protein L0Z56_06350 PF00155 Aminotransferase class I and II L0Z56_06360 PF01132 Elongation factor P (EF-P) OB domain L0Z56_06360 PF09285 Elongation factor P, C-terminal L0Z56_06360 PF08207 Elongation factor P (EF-P) KOW-like domain L0Z56_06365 PF05239 PRC-barrel domain L0Z56_06365 PF01782 RimM N-terminal domain L0Z56_06370 PF00202 Aminotransferase class-III L0Z56_06375 PF00989 PAS fold L0Z56_06375 PF00512 His Kinase A (phospho-acceptor) domain L0Z56_06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0Z56_06380 PF00578 AhpC/TSA family L0Z56_06385 PF02463 RecF/RecN/SMC N terminal domain L0Z56_06405 PF03631 Virulence factor BrkB L0Z56_06420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0Z56_06420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L0Z56_06420 PF02142 MGS-like domain L0Z56_06440 PF04539 Sigma-70 region 3 L0Z56_06440 PF04545 Sigma-70, region 4 L0Z56_06440 PF04546 Sigma-70, non-essential region L0Z56_06440 PF03979 Sigma-70 factor, region 1.1 L0Z56_06440 PF00140 Sigma-70 factor, region 1.2 L0Z56_06440 PF04542 Sigma-70 region 2 L0Z56_06445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L0Z56_06455 PF13244 Domain of unknown function (DUF4040) L0Z56_06455 PF00361 Proton-conducting membrane transporter L0Z56_06455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z56_06460 PF03334 Na+/H+ antiporter subunit L0Z56_06470 PF01192 RNA polymerase Rpb6 L0Z56_06480 PF00731 AIR carboxylase L0Z56_06485 PF01119 DNA mismatch repair protein, C-terminal domain L0Z56_06485 PF08676 MutL C terminal dimerisation domain L0Z56_06490 PF02779 Transketolase, pyrimidine binding domain L0Z56_06490 PF16870 2-oxoglutarate dehydrogenase C-terminal L0Z56_06490 PF16078 2-oxoglutarate dehydrogenase N-terminus L0Z56_06490 PF00676 Dehydrogenase E1 component L0Z56_06515 PF13784 Fic/DOC family N-terminal L0Z56_06515 PF02661 Fic/DOC family L0Z56_06520 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase L0Z56_06525 PF01040 UbiA prenyltransferase family L0Z56_06530 PF02033 Ribosome-binding factor A L0Z56_06535 PF11987 Translation-initiation factor 2 L0Z56_06535 PF00009 Elongation factor Tu GTP binding domain L0Z56_06535 PF04760 Translation initiation factor IF-2, N-terminal region L0Z56_06540 PF08529 NusA N-terminal domain L0Z56_06540 PF13184 NusA-like KH domain L0Z56_06540 PF00575 S1 RNA binding domain L0Z56_06545 PF00873 AcrB/AcrD/AcrF family L0Z56_06555 PF00120 Glutamine synthetase, catalytic domain