locus-tag class description L0Z58_00005 PF00308 Bacterial dnaA protein L0Z58_00005 PF08299 Bacterial dnaA protein helix-turn-helix L0Z58_00005 PF11638 DnaA N-terminal domain L0Z58_00020 PF00925 GTP cyclohydrolase II L0Z58_00025 PF04335 VirB8 protein L0Z58_00040 PF00437 Type II/IV secretion system protein L0Z58_00045 PF02534 Type IV secretory system Conjugative DNA transfer L0Z58_00055 PF13847 Methyltransferase domain L0Z58_00055 PF17827 PrmC N-terminal domain L0Z58_00065 PF00164 Ribosomal protein S12/S23 L0Z58_00070 PF00177 Ribosomal protein S7p/S5e L0Z58_00075 PF00009 Elongation factor Tu GTP binding domain L0Z58_00075 PF03764 Elongation factor G, domain IV L0Z58_00075 PF03144 Elongation factor Tu domain 2 L0Z58_00075 PF00679 Elongation factor G C-terminus L0Z58_00075 PF14492 Elongation Factor G, domain II L0Z58_00080 PF00009 Elongation factor Tu GTP binding domain L0Z58_00080 PF03144 Elongation factor Tu domain 2 L0Z58_00080 PF03143 Elongation factor Tu C-terminal domain L0Z58_00095 PF00467 KOW motif L0Z58_00095 PF02357 Transcription termination factor nusG L0Z58_00100 PF03946 Ribosomal protein L11, N-terminal domain L0Z58_00100 PF00298 Ribosomal protein L11, RNA binding domain L0Z58_00105 PF00687 Ribosomal protein L1p/L10e family L0Z58_00110 PF00466 Ribosomal protein L10 L0Z58_00115 PF00542 Ribosomal protein L7/L12 C-terminal domain L0Z58_00115 PF16320 Ribosomal protein L7/L12 dimerisation domain L0Z58_00120 PF04565 RNA polymerase Rpb2, domain 3 L0Z58_00120 PF04560 RNA polymerase Rpb2, domain 7 L0Z58_00120 PF00562 RNA polymerase Rpb2, domain 6 L0Z58_00120 PF10385 RNA polymerase beta subunit external 1 domain L0Z58_00120 PF04561 RNA polymerase Rpb2, domain 2 L0Z58_00120 PF04998 RNA polymerase Rpb1, domain 5 L0Z58_00120 PF05000 RNA polymerase Rpb1, domain 4 L0Z58_00120 PF04983 RNA polymerase Rpb1, domain 3 L0Z58_00120 PF00623 RNA polymerase Rpb1, domain 2 L0Z58_00120 PF04997 RNA polymerase Rpb1, domain 1 L0Z58_00120 PF04563 RNA polymerase beta subunit L0Z58_00125 PF01207 Dihydrouridine synthase (Dus) L0Z58_00140 PF02403 Seryl-tRNA synthetase N-terminal domain L0Z58_00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z58_00145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L0Z58_00145 PF02843 Phosphoribosylglycinamide synthetase, C domain L0Z58_00145 PF02844 Phosphoribosylglycinamide synthetase, N domain L0Z58_00170 PF14572 Phosphoribosyl synthetase-associated domain L0Z58_00170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L0Z58_00175 PF02686 Glu-tRNAGln amidotransferase C subunit L0Z58_00180 PF04052 TolB amino-terminal domain L0Z58_00180 PF07676 WD40-like Beta Propeller Repeat L0Z58_00185 PF12706 Beta-lactamase superfamily domain L0Z58_00185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0Z58_00185 PF17770 Ribonuclease J C-terminal domain L0Z58_00190 PF00226 DnaJ domain L0Z58_00190 PF01556 DnaJ C terminal domain L0Z58_00190 PF00684 DnaJ central domain L0Z58_00250 PF00883 Cytosol aminopeptidase family, catalytic domain L0Z58_00250 PF02789 Cytosol aminopeptidase family, N-terminal domain L0Z58_00260 PF00216 Bacterial DNA-binding protein L0Z58_00270 PF01551 Peptidase family M23 L0Z58_00275 PF13603 Leucyl-tRNA synthetase, Domain 2 L0Z58_00275 PF09334 tRNA synthetases class I (M) L0Z58_00275 PF08264 Anticodon-binding domain of tRNA L0Z58_00275 PF00133 tRNA synthetases class I (I, L, M and V) L0Z58_00285 PF13333 Integrase core domain L0Z58_00285 PF00665 Integrase core domain L0Z58_00285 PF13276 HTH-like domain L0Z58_00290 PF13276 HTH-like domain L0Z58_00290 PF00665 Integrase core domain L0Z58_00290 PF13333 Integrase core domain L0Z58_00305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L0Z58_00315 PF00380 Ribosomal protein S9/S16 L0Z58_00320 PF00572 Ribosomal protein L13 L0Z58_00330 PF10691 Protein of unknown function (DUF2497) L0Z58_00335 PF01728 FtsJ-like methyltransferase L0Z58_00370 PF13276 HTH-like domain L0Z58_00370 PF00665 Integrase core domain L0Z58_00370 PF13333 Integrase core domain L0Z58_00375 PF13276 HTH-like domain L0Z58_00375 PF00665 Integrase core domain L0Z58_00375 PF13333 Integrase core domain L0Z58_00405 PF02355 Protein export membrane protein L0Z58_00430 PF00571 CBS domain L0Z58_00430 PF00478 IMP dehydrogenase / GMP reductase domain L0Z58_00435 PF00398 Ribosomal RNA adenine dimethylase L0Z58_00445 PF00121 Triosephosphate isomerase L0Z58_00450 PF02481 DNA recombination-mediator protein A L0Z58_00450 PF17782 DprA winged helix domain L0Z58_00455 PF00037 4Fe-4S binding domain L0Z58_00455 PF11953 Domain of unknown function (DUF3470) L0Z58_00465 PF07478 D-ala D-ala ligase C-terminus L0Z58_00465 PF01820 D-ala D-ala ligase N-terminus L0Z58_00470 PF03799 Cell division protein FtsQ L0Z58_00470 PF08478 POTRA domain, FtsQ-type L0Z58_00475 PF07943 Penicillin-binding protein 5, C-terminal domain L0Z58_00475 PF00768 D-alanyl-D-alanine carboxypeptidase L0Z58_00480 PF00893 Small Multidrug Resistance protein L0Z58_00485 PF00893 Small Multidrug Resistance protein L0Z58_00495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain L0Z58_00495 PF14850 DNA-binding domain of Proline dehydrogenase L0Z58_00495 PF00171 Aldehyde dehydrogenase family L0Z58_00495 PF01619 Proline dehydrogenase L0Z58_00500 PF00694 Aconitase C-terminal domain L0Z58_00500 PF00330 Aconitase family (aconitate hydratase) L0Z58_00505 PF02556 Preprotein translocase subunit SecB L0Z58_00515 PF00929 Exonuclease L0Z58_00520 PF02630 SCO1/SenC L0Z58_00530 PF00986 DNA gyrase B subunit, carboxyl terminus L0Z58_00530 PF00204 DNA gyrase B L0Z58_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0Z58_00530 PF01751 Toprim domain L0Z58_00545 PF13276 HTH-like domain L0Z58_00545 PF00665 Integrase core domain L0Z58_00545 PF13333 Integrase core domain L0Z58_00555 PF01609 Transposase DDE domain L0Z58_00560 PF04551 GcpE protein L0Z58_00575 PF09397 Ftsk gamma domain L0Z58_00575 PF01580 FtsK/SpoIIIE family L0Z58_00575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L0Z58_00575 PF17854 FtsK alpha domain L0Z58_00580 PF02325 YGGT family L0Z58_00630 PF00677 Lumazine binding domain L0Z58_00640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L0Z58_00640 PF01409 tRNA synthetases class II core domain (F) L0Z58_00645 PF12804 MobA-like NTP transferase domain L0Z58_00645 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z58_00645 PF14602 Hexapeptide repeat of succinyl-transferase L0Z58_00650 PF00829 Ribosomal prokaryotic L21 protein L0Z58_00655 PF01016 Ribosomal L27 protein L0Z58_00665 PF00438 S-adenosylmethionine synthetase, N-terminal domain L0Z58_00665 PF02772 S-adenosylmethionine synthetase, central domain L0Z58_00665 PF02773 S-adenosylmethionine synthetase, C-terminal domain L0Z58_00675 PF03070 TENA/THI-4/PQQC family L0Z58_00685 PF00510 Cytochrome c oxidase subunit III L0Z58_00690 PF02075 Crossover junction endodeoxyribonuclease RuvC L0Z58_00695 PF03652 Holliday junction resolvase L0Z58_00705 PF02934 GatB/GatE catalytic domain L0Z58_00705 PF02637 GatB domain L0Z58_00720 PF01406 tRNA synthetases class I (C) catalytic domain L0Z58_00720 PF09190 DALR domain L0Z58_00725 PF06055 Exopolysaccharide synthesis, ExoD L0Z58_00735 PF02416 mttA/Hcf106 family L0Z58_00740 PF00005 ABC transporter L0Z58_00740 PF08402 TOBE domain L0Z58_00750 PF08459 UvrC Helix-hairpin-helix N-terminal L0Z58_00750 PF01541 GIY-YIG catalytic domain L0Z58_00750 PF02151 UvrB/uvrC motif L0Z58_00755 PF05746 DALR anticodon binding domain L0Z58_00755 PF02092 Glycyl-tRNA synthetase beta subunit L0Z58_00760 PF02091 Glycyl-tRNA synthetase alpha subunit L0Z58_00770 PF00490 Delta-aminolevulinic acid dehydratase L0Z58_00775 PF00146 NADH dehydrogenase L0Z58_00780 PF00384 Molybdopterin oxidoreductase L0Z58_00780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L0Z58_00780 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal L0Z58_00795 PF03167 Uracil DNA glycosylase superfamily L0Z58_00800 PF01327 Polypeptide deformylase L0Z58_00805 PF02491 SHS2 domain inserted in FTSA L0Z58_00810 PF00557 Metallopeptidase family M24 L0Z58_00815 PF07690 Major Facilitator Superfamily L0Z58_00815 PF00083 Sugar (and other) transporter L0Z58_00820 PF01795 MraW methylase family L0Z58_00835 PF14693 Ribosomal protein TL5, C-terminal domain L0Z58_00835 PF01386 Ribosomal L25p family L0Z58_00840 PF01195 Peptidyl-tRNA hydrolase L0Z58_00850 PF01494 FAD binding domain L0Z58_00860 PF10609 NUBPL iron-transfer P-loop NTPase L0Z58_00885 PF13333 Integrase core domain L0Z58_00885 PF00665 Integrase core domain L0Z58_00885 PF13276 HTH-like domain L0Z58_00890 PF13333 Integrase core domain L0Z58_00890 PF00665 Integrase core domain L0Z58_00890 PF13276 HTH-like domain L0Z58_00905 PF01121 Dephospho-CoA kinase L0Z58_00910 PF00570 HRDC domain L0Z58_00910 PF01612 3'-5' exonuclease L0Z58_00915 PF05192 MutS domain III L0Z58_00915 PF05188 MutS domain II L0Z58_00915 PF01624 MutS domain I L0Z58_00915 PF00488 MutS domain V L0Z58_00915 PF05190 MutS family domain IV L0Z58_00930 PF00571 CBS domain L0Z58_00930 PF03471 Transporter associated domain L0Z58_00930 PF03741 Integral membrane protein TerC family L0Z58_00935 PF00117 Glutamine amidotransferase class-I L0Z58_00935 PF00958 GMP synthase C terminal domain L0Z58_00935 PF02540 NAD synthase L0Z58_00940 PF03477 ATP cone domain L0Z58_00940 PF02867 Ribonucleotide reductase, barrel domain L0Z58_00940 PF00317 Ribonucleotide reductase, all-alpha domain L0Z58_00945 PF01209 ubiE/COQ5 methyltransferase family L0Z58_00970 PF00468 Ribosomal protein L34 L0Z58_00975 PF00528 Binding-protein-dependent transport system inner membrane component L0Z58_00980 PF02874 ATP synthase alpha/beta family, beta-barrel domain L0Z58_00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z58_00985 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L0Z58_01010 PF00596 Class II Aldolase and Adducin N-terminal domain L0Z58_01020 PF00814 Glycoprotease family L0Z58_01030 PF00268 Ribonucleotide reductase, small chain L0Z58_01055 PF17761 DUF1016 N-terminal domain L0Z58_01055 PF06250 YhcG PDDEXK nuclease domain L0Z58_01065 PF02565 Recombination protein O C terminal L0Z58_01065 PF11967 Recombination protein O N terminal L0Z58_01075 PF00072 Response regulator receiver domain L0Z58_01075 PF00990 Diguanylate cyclase, GGDEF domain L0Z58_01085 PF05088 Bacterial NAD-glutamate dehydrogenase L0Z58_01090 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z58_01090 PF17871 AAA lid domain L0Z58_01090 PF07724 AAA domain (Cdc48 subfamily) L0Z58_01090 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_01090 PF02861 Clp amino terminal domain, pathogenicity island component L0Z58_01105 PF00679 Elongation factor G C-terminus L0Z58_01105 PF03144 Elongation factor Tu domain 2 L0Z58_01105 PF00009 Elongation factor Tu GTP binding domain L0Z58_01110 PF00156 Phosphoribosyl transferase domain L0Z58_01115 PF00375 Sodium:dicarboxylate symporter family L0Z58_01120 PF01979 Amidohydrolase family L0Z58_01135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal L0Z58_01135 PF01578 Cytochrome C assembly protein L0Z58_01150 PF02355 Protein export membrane protein L0Z58_01150 PF07549 SecD/SecF GG Motif L0Z58_01160 PF14849 YidC periplasmic domain L0Z58_01160 PF02096 60Kd inner membrane protein L0Z58_01165 PF00885 6,7-dimethyl-8-ribityllumazine synthase L0Z58_01170 PF01029 NusB family L0Z58_01200 PF00692 dUTPase L0Z58_01205 PF00696 Amino acid kinase family L0Z58_01210 PF01926 50S ribosome-binding GTPase L0Z58_01215 PF03462 PCRF domain L0Z58_01215 PF00472 RF-1 domain L0Z58_01220 PF07690 Major Facilitator Superfamily L0Z58_01245 PF02646 RmuC family L0Z58_01250 PF01609 Transposase DDE domain L0Z58_01255 PF00872 Transposase, Mutator family L0Z58_01265 PF01381 Helix-turn-helix L0Z58_01265 PF08671 Anti-repressor SinI L0Z58_01275 PF04002 RadC-like JAB domain L0Z58_01280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_01280 PF01348 Type II intron maturase L0Z58_01305 PF01555 DNA methylase L0Z58_01305 PF18755 Restriction Enzyme Adenine Methylase Associated L0Z58_01350 PF02371 Transposase IS116/IS110/IS902 family L0Z58_01350 PF01548 Transposase L0Z58_01425 PF00239 Resolvase, N terminal domain L0Z58_01425 PF02796 Helix-turn-helix domain of resolvase L0Z58_01465 PF01527 Transposase L0Z58_01475 PF13276 HTH-like domain L0Z58_01475 PF00665 Integrase core domain L0Z58_01475 PF13333 Integrase core domain L0Z58_01480 PF13276 HTH-like domain L0Z58_01480 PF00665 Integrase core domain L0Z58_01480 PF13333 Integrase core domain L0Z58_01485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L0Z58_01485 PF02790 Cytochrome C oxidase subunit II, transmembrane domain L0Z58_01490 PF00115 Cytochrome C and Quinol oxidase polypeptide I L0Z58_01495 PF01040 UbiA prenyltransferase family L0Z58_01500 PF00075 RNase H L0Z58_01510 PF00118 TCP-1/cpn60 chaperonin family L0Z58_01515 PF00166 Chaperonin 10 Kd subunit L0Z58_01520 PF01571 Aminomethyltransferase folate-binding domain L0Z58_01525 PF02272 DHHA1 domain L0Z58_01525 PF17768 RecJ OB domain L0Z58_01525 PF01368 DHH family L0Z58_01540 PF00115 Cytochrome C and Quinol oxidase polypeptide I L0Z58_01550 PF05362 Lon protease (S16) C-terminal proteolytic domain L0Z58_01550 PF02190 ATP-dependent protease La (LON) substrate-binding domain L0Z58_01550 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_01555 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z58_01555 PF07724 AAA domain (Cdc48 subfamily) L0Z58_01555 PF06689 ClpX C4-type zinc finger L0Z58_01560 PF00574 Clp protease L0Z58_01565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L0Z58_01565 PF05698 Bacterial trigger factor protein (TF) C-terminus L0Z58_01565 PF05697 Bacterial trigger factor protein (TF) L0Z58_01575 PF04972 BON domain L0Z58_01580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain L0Z58_01580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain L0Z58_01585 PF03033 Glycosyltransferase family 28 N-terminal domain L0Z58_01585 PF04101 Glycosyltransferase family 28 C-terminal domain L0Z58_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_01595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0Z58_01600 PF01548 Transposase L0Z58_01600 PF02371 Transposase IS116/IS110/IS902 family L0Z58_01630 PF01235 Sodium:alanine symporter family L0Z58_01645 PF02545 Maf-like protein L0Z58_01650 PF01176 Translation initiation factor 1A / IF-1 L0Z58_01665 PF00709 Adenylosuccinate synthetase L0Z58_01685 PF01578 Cytochrome C assembly protein L0Z58_01690 PF03618 Kinase/pyrophosphorylase L0Z58_01695 PF00444 Ribosomal protein L36 L0Z58_01715 PF13276 HTH-like domain L0Z58_01715 PF00665 Integrase core domain L0Z58_01715 PF13333 Integrase core domain L0Z58_01720 PF13333 Integrase core domain L0Z58_01720 PF13276 HTH-like domain L0Z58_01720 PF00665 Integrase core domain L0Z58_01725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L0Z58_01730 PF13784 Fic/DOC family N-terminal L0Z58_01730 PF02661 Fic/DOC family L0Z58_01735 PF13662 Toprim domain L0Z58_01735 PF08275 DNA primase catalytic core, N-terminal domain L0Z58_01735 PF01807 CHC2 zinc finger L0Z58_01740 PF08241 Methyltransferase domain L0Z58_01750 PF09334 tRNA synthetases class I (M) L0Z58_01750 PF08264 Anticodon-binding domain of tRNA L0Z58_01760 PF03796 DnaB-like helicase C terminal domain L0Z58_01760 PF00772 DnaB-like helicase N terminal domain L0Z58_01770 PF06271 RDD family L0Z58_01775 PF04002 RadC-like JAB domain L0Z58_01785 PF00580 UvrD/REP helicase N-terminal domain L0Z58_01785 PF13361 UvrD-like helicase C-terminal domain L0Z58_01785 PF12705 PD-(D/E)XK nuclease superfamily L0Z58_01790 PF08544 GHMP kinases C terminal L0Z58_01790 PF00288 GHMP kinases N terminal domain L0Z58_01800 PF00950 ABC 3 transport family L0Z58_01825 PF05173 Dihydrodipicolinate reductase, C-terminus L0Z58_01825 PF01113 Dihydrodipicolinate reductase, N-terminus L0Z58_01830 PF00005 ABC transporter L0Z58_01845 PF13276 HTH-like domain L0Z58_01845 PF00665 Integrase core domain L0Z58_01845 PF13333 Integrase core domain L0Z58_01850 PF13276 HTH-like domain L0Z58_01850 PF00665 Integrase core domain L0Z58_01850 PF13333 Integrase core domain L0Z58_01860 PF00571 CBS domain L0Z58_01860 PF01769 Divalent cation transporter L0Z58_01860 PF03448 MgtE intracellular N domain L0Z58_01865 PF02386 Cation transport protein L0Z58_01870 PF02386 Cation transport protein L0Z58_01885 PF00692 dUTPase L0Z58_01910 PF07690 Major Facilitator Superfamily L0Z58_01925 PF00456 Transketolase, thiamine diphosphate binding domain L0Z58_01925 PF02780 Transketolase, C-terminal domain L0Z58_01925 PF02779 Transketolase, pyrimidine binding domain L0Z58_01930 PF01479 S4 domain L0Z58_01930 PF00163 Ribosomal protein S4/S9 N-terminal domain L0Z58_01940 PF04384 Iron-sulphur cluster assembly L0Z58_01950 PF00830 Ribosomal L28 family L0Z58_01955 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L0Z58_01955 PF04055 Radical SAM superfamily L0Z58_01960 PF01209 ubiE/COQ5 methyltransferase family L0Z58_01965 PF01098 Cell cycle protein L0Z58_01980 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_01995 PF00664 ABC transporter transmembrane region L0Z58_01995 PF00005 ABC transporter L0Z58_02005 PF03485 Arginyl tRNA synthetase N terminal domain L0Z58_02005 PF00750 tRNA synthetases class I (R) L0Z58_02005 PF05746 DALR anticodon binding domain L0Z58_02035 PF00005 ABC transporter L0Z58_02045 PF00152 tRNA synthetases class II (D, K and N) L0Z58_02045 PF02938 GAD domain L0Z58_02045 PF01336 OB-fold nucleic acid binding domain L0Z58_02050 PF00083 Sugar (and other) transporter L0Z58_02050 PF08946 Osmosensory transporter coiled coil L0Z58_02055 PF00849 RNA pseudouridylate synthase L0Z58_02055 PF01479 S4 domain L0Z58_02060 PF00676 Dehydrogenase E1 component L0Z58_02065 PF03653 Uncharacterised protein family (UPF0093) L0Z58_02075 PF00919 Uncharacterized protein family UPF0004 L0Z58_02075 PF04055 Radical SAM superfamily L0Z58_02075 PF01938 TRAM domain L0Z58_02085 PF00854 POT family L0Z58_02090 PF00133 tRNA synthetases class I (I, L, M and V) L0Z58_02090 PF08264 Anticodon-binding domain of tRNA L0Z58_02100 PF03484 tRNA synthetase B5 domain L0Z58_02100 PF03147 Ferredoxin-fold anticodon binding domain L0Z58_02100 PF01588 Putative tRNA binding domain L0Z58_02100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L0Z58_02100 PF03483 B3/4 domain L0Z58_02110 PF00119 ATP synthase A chain L0Z58_02115 PF00137 ATP synthase subunit C L0Z58_02135 PF02628 Cytochrome oxidase assembly protein L0Z58_02140 PF00289 Biotin carboxylase, N-terminal domain L0Z58_02140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0Z58_02140 PF18140 Propionyl-coenzyme A carboxylase BT domain L0Z58_02140 PF02785 Biotin carboxylase C-terminal domain L0Z58_02140 PF00364 Biotin-requiring enzyme L0Z58_02150 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0Z58_02155 PF00890 FAD binding domain L0Z58_02155 PF02910 Fumarate reductase flavoprotein C-term L0Z58_02165 PF00625 Guanylate kinase L0Z58_02185 PF01926 50S ribosome-binding GTPase L0Z58_02185 PF06071 Protein of unknown function (DUF933) L0Z58_02195 PF01743 Poly A polymerase head domain L0Z58_02195 PF12627 Probable RNA and SrmB- binding site of polymerase A L0Z58_02195 PF13735 tRNA nucleotidyltransferase domain 2 putative L0Z58_02220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L0Z58_02220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L0Z58_02225 PF00902 Sec-independent protein translocase protein (TatC) L0Z58_02230 PF01316 Arginine repressor, DNA binding domain L0Z58_02230 PF02863 Arginine repressor, C-terminal domain L0Z58_02235 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0Z58_02240 PF00528 Binding-protein-dependent transport system inner membrane component L0Z58_02245 PF00005 ABC transporter L0Z58_02270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L0Z58_02285 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_02285 PF17862 AAA+ lid domain L0Z58_02285 PF06480 FtsH Extracellular L0Z58_02285 PF01434 Peptidase family M41 L0Z58_02290 PF00133 tRNA synthetases class I (I, L, M and V) L0Z58_02290 PF08264 Anticodon-binding domain of tRNA L0Z58_02310 PF00117 Glutamine amidotransferase class-I L0Z58_02310 PF06418 CTP synthase N-terminus L0Z58_02315 PF14437 MafB19-like deaminase L0Z58_02320 PF07690 Major Facilitator Superfamily L0Z58_02320 PF00083 Sugar (and other) transporter L0Z58_02330 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_02330 PF06480 FtsH Extracellular L0Z58_02330 PF01434 Peptidase family M41 L0Z58_02330 PF17862 AAA+ lid domain L0Z58_02335 PF00364 Biotin-requiring enzyme L0Z58_02335 PF02779 Transketolase, pyrimidine binding domain L0Z58_02335 PF02780 Transketolase, C-terminal domain L0Z58_02345 PF00679 Elongation factor G C-terminus L0Z58_02345 PF00009 Elongation factor Tu GTP binding domain L0Z58_02345 PF03144 Elongation factor Tu domain 2 L0Z58_02345 PF14492 Elongation Factor G, domain II L0Z58_02345 PF06421 GTP-binding protein LepA C-terminus L0Z58_02370 PF08525 Opacity-associated protein A N-terminal motif L0Z58_02370 PF01551 Peptidase family M23 L0Z58_02370 PF01476 LysM domain L0Z58_02375 PF01709 Transcriptional regulator L0Z58_02380 PF13525 Outer membrane lipoprotein L0Z58_02390 PF01066 CDP-alcohol phosphatidyltransferase L0Z58_02395 PF03949 Malic enzyme, NAD binding domain L0Z58_02395 PF01515 Phosphate acetyl/butaryl transferase L0Z58_02395 PF00390 Malic enzyme, N-terminal domain L0Z58_02410 PF00462 Glutaredoxin L0Z58_02415 PF10415 Fumarase C C-terminus L0Z58_02415 PF00206 Lyase L0Z58_02425 PF01018 GTP1/OBG L0Z58_02425 PF01926 50S ribosome-binding GTPase L0Z58_02430 PF00113 Enolase, C-terminal TIM barrel domain L0Z58_02430 PF03952 Enolase, N-terminal domain L0Z58_02435 PF08245 Mur ligase middle domain L0Z58_02435 PF02875 Mur ligase family, glutamate ligase domain L0Z58_02435 PF01225 Mur ligase family, catalytic domain L0Z58_02440 PF03330 Lytic transglycolase L0Z58_02465 PF00919 Uncharacterized protein family UPF0004 L0Z58_02465 PF04055 Radical SAM superfamily L0Z58_02470 PF01425 Amidase L0Z58_02475 PF01348 Type II intron maturase L0Z58_02475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_02495 PF08676 MutL C terminal dimerisation domain L0Z58_02495 PF01119 DNA mismatch repair protein, C-terminal domain L0Z58_02535 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_02535 PF01348 Type II intron maturase L0Z58_02550 PF01527 Transposase L0Z58_02555 PF13333 Integrase core domain L0Z58_02555 PF00665 Integrase core domain L0Z58_02555 PF13276 HTH-like domain L0Z58_02560 PF13333 Integrase core domain L0Z58_02560 PF00665 Integrase core domain L0Z58_02560 PF13276 HTH-like domain L0Z58_02580 PF01467 Cytidylyltransferase-like L0Z58_02595 PF01255 Putative undecaprenyl diphosphate synthase L0Z58_02605 PF01765 Ribosome recycling factor L0Z58_02610 PF00696 Amino acid kinase family L0Z58_02615 PF00889 Elongation factor TS L0Z58_02620 PF00318 Ribosomal protein S2 L0Z58_02630 PF02699 Preprotein translocase subunit L0Z58_02635 PF01380 SIS domain L0Z58_02650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_02670 PF01565 FAD binding domain L0Z58_02670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L0Z58_02675 PF03900 Porphobilinogen deaminase, C-terminal domain L0Z58_02675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L0Z58_02680 PF02817 e3 binding domain L0Z58_02680 PF00364 Biotin-requiring enzyme L0Z58_02680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L0Z58_02705 PF07516 SecA Wing and Scaffold domain L0Z58_02705 PF01043 SecA preprotein cross-linking domain L0Z58_02705 PF07517 SecA DEAD-like domain L0Z58_02705 PF02810 SEC-C motif L0Z58_02715 PF00923 Transaldolase/Fructose-6-phosphate aldolase L0Z58_02730 PF13333 Integrase core domain L0Z58_02730 PF13276 HTH-like domain L0Z58_02730 PF00665 Integrase core domain L0Z58_02740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L0Z58_02740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L0Z58_02745 PF02441 Flavoprotein L0Z58_02750 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) L0Z58_02755 PF03471 Transporter associated domain L0Z58_02755 PF01595 Cyclin M transmembrane N-terminal domain L0Z58_02755 PF00571 CBS domain L0Z58_02760 PF00202 Aminotransferase class-III L0Z58_02765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L0Z58_02780 PF01609 Transposase DDE domain L0Z58_02790 PF01734 Patatin-like phospholipase L0Z58_02930 PF01555 DNA methylase L0Z58_02930 PF18755 Restriction Enzyme Adenine Methylase Associated L0Z58_02940 PF00023 Ankyrin repeat L0Z58_02995 PF01348 Type II intron maturase L0Z58_02995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_03005 PF00271 Helicase conserved C-terminal domain L0Z58_03005 PF12419 SNF2 Helicase protein L0Z58_03005 PF00176 SNF2 family N-terminal domain L0Z58_03010 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z58_03010 PF14602 Hexapeptide repeat of succinyl-transferase L0Z58_03010 PF12804 MobA-like NTP transferase domain L0Z58_03015 PF16363 GDP-mannose 4,6 dehydratase L0Z58_03035 PF00005 ABC transporter L0Z58_03035 PF00664 ABC transporter transmembrane region L0Z58_03040 PF01212 Beta-eliminating lyase L0Z58_03045 PF01212 Beta-eliminating lyase L0Z58_03055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L0Z58_03055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L0Z58_03055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L0Z58_03060 PF00892 EamA-like transporter family L0Z58_03080 PF04002 RadC-like JAB domain L0Z58_03085 PF01381 Helix-turn-helix L0Z58_03120 PF02796 Helix-turn-helix domain of resolvase L0Z58_03120 PF00239 Resolvase, N terminal domain L0Z58_03190 PF00665 Integrase core domain L0Z58_03190 PF13276 HTH-like domain L0Z58_03190 PF13333 Integrase core domain L0Z58_03195 PF01527 Transposase L0Z58_03200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L0Z58_03200 PF00529 HlyD membrane-fusion protein of T1SS L0Z58_03220 PF00925 GTP cyclohydrolase II L0Z58_03220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L0Z58_03225 PF03449 Transcription elongation factor, N-terminal L0Z58_03225 PF01272 Transcription elongation factor, GreA/GreB, C-term L0Z58_03230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z58_03230 PF00306 ATP synthase alpha/beta chain, C terminal domain L0Z58_03230 PF02874 ATP synthase alpha/beta family, beta-barrel domain L0Z58_03235 PF00213 ATP synthase delta (OSCP) subunit L0Z58_03240 PF02021 Uncharacterised protein family UPF0102 L0Z58_03245 PF01196 Ribosomal protein L17 L0Z58_03250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L0Z58_03250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L0Z58_03250 PF01000 RNA polymerase Rpb3/RpoA insert domain L0Z58_03255 PF00411 Ribosomal protein S11 L0Z58_03260 PF00416 Ribosomal protein S13/S18 L0Z58_03270 PF00344 SecY translocase L0Z58_03275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L0Z58_03280 PF03719 Ribosomal protein S5, C-terminal domain L0Z58_03280 PF00333 Ribosomal protein S5, N-terminal domain L0Z58_03285 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L0Z58_03290 PF00347 Ribosomal protein L6 L0Z58_03295 PF00410 Ribosomal protein S8 L0Z58_03300 PF00253 Ribosomal protein S14p/S29e L0Z58_03305 PF00281 Ribosomal protein L5 L0Z58_03305 PF00673 ribosomal L5P family C-terminus L0Z58_03310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L0Z58_03315 PF00238 Ribosomal protein L14p/L23e L0Z58_03320 PF00366 Ribosomal protein S17 L0Z58_03325 PF00831 Ribosomal L29 protein L0Z58_03330 PF00252 Ribosomal protein L16p/L10e L0Z58_03335 PF00189 Ribosomal protein S3, C-terminal domain L0Z58_03335 PF07650 KH domain L0Z58_03340 PF00237 Ribosomal protein L22p/L17e L0Z58_03345 PF00203 Ribosomal protein S19 L0Z58_03350 PF03947 Ribosomal Proteins L2, C-terminal domain L0Z58_03350 PF00181 Ribosomal Proteins L2, RNA binding domain L0Z58_03355 PF00276 Ribosomal protein L23 L0Z58_03360 PF00573 Ribosomal protein L4/L1 family L0Z58_03365 PF00297 Ribosomal protein L3 L0Z58_03370 PF00338 Ribosomal protein S10p/S20e L0Z58_03375 PF03144 Elongation factor Tu domain 2 L0Z58_03375 PF03143 Elongation factor Tu C-terminal domain L0Z58_03375 PF00009 Elongation factor Tu GTP binding domain L0Z58_03390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L0Z58_03390 PF00117 Glutamine amidotransferase class-I L0Z58_03405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L0Z58_03420 PF00391 PEP-utilising enzyme, mobile domain L0Z58_03420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L0Z58_03420 PF02896 PEP-utilising enzyme, TIM barrel domain L0Z58_03435 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_03445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L0Z58_03445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L0Z58_03445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L0Z58_03445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L0Z58_03465 PF01548 Transposase L0Z58_03465 PF02371 Transposase IS116/IS110/IS902 family L0Z58_03470 PF00814 Glycoprotease family L0Z58_03485 PF00266 Aminotransferase class-V L0Z58_03490 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L0Z58_03500 PF00005 ABC transporter L0Z58_03505 PF01521 Iron-sulphur cluster biosynthesis L0Z58_03510 PF13286 Phosphohydrolase-associated domain L0Z58_03510 PF01966 HD domain L0Z58_03515 PF01872 RibD C-terminal domain L0Z58_03515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L0Z58_03525 PF00834 Ribulose-phosphate 3 epimerase family L0Z58_03535 PF00132 Bacterial transferase hexapeptide (six repeats) L0Z58_03535 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal L0Z58_03535 PF14602 Hexapeptide repeat of succinyl-transferase L0Z58_03560 PF00905 Penicillin binding protein transpeptidase domain L0Z58_03560 PF03717 Penicillin-binding Protein dimerisation domain L0Z58_03565 PF00457 Glycosyl hydrolases family 11 L0Z58_03565 PF03422 Carbohydrate binding module (family 6) L0Z58_03565 PF01522 Polysaccharide deacetylase L0Z58_03570 PF01078 Magnesium chelatase, subunit ChlI L0Z58_03570 PF13335 Magnesium chelatase, subunit ChlI C-terminal L0Z58_03580 PF00091 Tubulin/FtsZ family, GTPase domain L0Z58_03580 PF12327 FtsZ family, C-terminal domain L0Z58_03595 PF02130 Uncharacterized protein family UPF0054 L0Z58_03600 PF13085 2Fe-2S iron-sulfur cluster binding domain L0Z58_03615 PF04608 Phosphatidylglycerophosphatase A L0Z58_03620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L0Z58_03620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L0Z58_03625 PF00486 Transcriptional regulatory protein, C terminal L0Z58_03625 PF00072 Response regulator receiver domain L0Z58_03645 PF01702 Queuine tRNA-ribosyltransferase L0Z58_03655 PF00675 Insulinase (Peptidase family M16) L0Z58_03655 PF05193 Peptidase M16 inactive domain L0Z58_03660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L0Z58_03660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L0Z58_03665 PF01654 Cytochrome bd terminal oxidase subunit I L0Z58_03670 PF02322 Cytochrome bd terminal oxidase subunit II L0Z58_03675 PF01926 50S ribosome-binding GTPase L0Z58_03675 PF07650 KH domain L0Z58_03720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0Z58_03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_03725 PF00589 Phage integrase family L0Z58_03725 PF02899 Phage integrase, N-terminal SAM-like domain L0Z58_03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_03745 PF00578 AhpC/TSA family L0Z58_03745 PF10417 C-terminal domain of 1-Cys peroxiredoxin L0Z58_03755 PF00462 Glutaredoxin L0Z58_03760 PF01687 Riboflavin kinase L0Z58_03760 PF06574 FAD synthetase L0Z58_03765 PF01252 Signal peptidase (SPase) II L0Z58_03770 PF00675 Insulinase (Peptidase family M16) L0Z58_03770 PF05193 Peptidase M16 inactive domain L0Z58_03780 PF00551 Formyl transferase L0Z58_03800 PF01668 SmpB protein L0Z58_03805 PF01790 Prolipoprotein diacylglyceryl transferase L0Z58_03810 PF00005 ABC transporter L0Z58_03810 PF00664 ABC transporter transmembrane region L0Z58_03835 PF00436 Single-strand binding protein family L0Z58_03840 PF00701 Dihydrodipicolinate synthetase family L0Z58_03845 PF03120 NAD-dependent DNA ligase OB-fold domain L0Z58_03845 PF01653 NAD-dependent DNA ligase adenylation domain L0Z58_03845 PF00533 BRCA1 C Terminus (BRCT) domain L0Z58_03845 PF12826 Helix-hairpin-helix motif L0Z58_03845 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L0Z58_03850 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0Z58_03855 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0Z58_03855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0Z58_03855 PF14579 Helix-hairpin-helix motif L0Z58_03855 PF02811 PHP domain L0Z58_03860 PF01250 Ribosomal protein S6 L0Z58_03865 PF01084 Ribosomal protein S18 L0Z58_03870 PF03948 Ribosomal protein L9, C-terminal domain L0Z58_03870 PF01281 Ribosomal protein L9, N-terminal domain L0Z58_03885 PF10397 Adenylosuccinate lyase C-terminus L0Z58_03885 PF00206 Lyase L0Z58_03895 PF13685 Iron-containing alcohol dehydrogenase L0Z58_03900 PF01546 Peptidase family M20/M25/M40 L0Z58_03900 PF07687 Peptidase dimerisation domain L0Z58_03905 PF00730 HhH-GPD superfamily base excision DNA repair protein L0Z58_03905 PF10576 Iron-sulfur binding domain of endonuclease III L0Z58_03905 PF00633 Helix-hairpin-helix motif L0Z58_03915 PF18324 Hypothetical protein TT1725 L0Z58_03915 PF00180 Isocitrate/isopropylmalate dehydrogenase L0Z58_03930 PF07497 Rho termination factor, RNA-binding domain L0Z58_03930 PF07498 Rho termination factor, N-terminal domain L0Z58_03930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0Z58_03940 PF00639 PPIC-type PPIASE domain L0Z58_03945 PF00886 Ribosomal protein S16 L0Z58_03950 PF00348 Polyprenyl synthetase L0Z58_03955 PF01025 GrpE L0Z58_03960 PF00579 tRNA synthetases class I (W and Y) L0Z58_03970 PF00034 Cytochrome c L0Z58_04000 PF03129 Anticodon binding domain L0Z58_04000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z58_04005 PF01648 4'-phosphopantetheinyl transferase superfamily L0Z58_04015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z58_04015 PF00361 Proton-conducting membrane transporter L0Z58_04015 PF13244 Domain of unknown function (DUF4040) L0Z58_04035 PF01300 Telomere recombination L0Z58_04055 PF17191 RecG wedge domain L0Z58_04055 PF00271 Helicase conserved C-terminal domain L0Z58_04055 PF00270 DEAD/DEAH box helicase L0Z58_04095 PF01145 SPFH domain / Band 7 family L0Z58_04100 PF01145 SPFH domain / Band 7 family L0Z58_04105 PF13180 PDZ domain L0Z58_04130 PF00271 Helicase conserved C-terminal domain L0Z58_04130 PF12344 Ultra-violet resistance protein B L0Z58_04130 PF17757 UvrB interaction domain L0Z58_04130 PF04851 Type III restriction enzyme, res subunit L0Z58_04130 PF02151 UvrB/uvrC motif L0Z58_04145 PF02371 Transposase IS116/IS110/IS902 family L0Z58_04145 PF01548 Transposase L0Z58_04150 PF03918 Cytochrome C biogenesis protein L0Z58_04160 PF00111 2Fe-2S iron-sulfur cluster binding domain L0Z58_04170 PF08245 Mur ligase middle domain L0Z58_04195 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z58_04200 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z58_04205 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z58_04210 PF04610 TrbL/VirB6 plasmid conjugal transfer protein L0Z58_04215 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L0Z58_04225 PF01921 tRNA synthetases class I (K) L0Z58_04240 PF02272 DHHA1 domain L0Z58_04240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0Z58_04240 PF01411 tRNA synthetases class II (A) L0Z58_04250 PF01632 Ribosomal protein L35 L0Z58_04255 PF00453 Ribosomal protein L20 L0Z58_04260 PF02911 Formyl transferase, C-terminal domain L0Z58_04260 PF00551 Formyl transferase L0Z58_04265 PF01808 AICARFT/IMPCHase bienzyme L0Z58_04265 PF02142 MGS-like domain L0Z58_04275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L0Z58_04275 PF01676 Metalloenzyme superfamily L0Z58_04280 PF00698 Acyl transferase domain L0Z58_04285 PF01197 Ribosomal protein L31 L0Z58_04290 PF01513 ATP-NAD kinase L0Z58_04305 PF13276 HTH-like domain L0Z58_04305 PF00665 Integrase core domain L0Z58_04305 PF13333 Integrase core domain L0Z58_04345 PF00085 Thioredoxin L0Z58_04355 PF03070 TENA/THI-4/PQQC family L0Z58_04365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L0Z58_04365 PF00809 Pterin binding enzyme L0Z58_04370 PF00809 Pterin binding enzyme L0Z58_04370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L0Z58_04375 PF00186 Dihydrofolate reductase L0Z58_04385 PF18073 Rubredoxin metal binding domain L0Z58_04390 PF02881 SRP54-type protein, helical bundle domain L0Z58_04390 PF00448 SRP54-type protein, GTPase domain L0Z58_04395 PF01592 NifU-like N terminal domain L0Z58_04400 PF01521 Iron-sulphur cluster biosynthesis L0Z58_04405 PF07743 HSCB C-terminal oligomerisation domain L0Z58_04410 PF00012 Hsp70 protein L0Z58_04415 PF10502 Signal peptidase, peptidase S26 L0Z58_04420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L0Z58_04420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L0Z58_04465 PF16198 tRNA pseudouridylate synthase B C-terminal domain L0Z58_04465 PF01509 TruB family pseudouridylate synthase (N terminal domain) L0Z58_04470 PF00312 Ribosomal protein S15 L0Z58_04475 PF00013 KH domain L0Z58_04475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L0Z58_04475 PF03725 3' exoribonuclease family, domain 2 L0Z58_04475 PF00575 S1 RNA binding domain L0Z58_04475 PF01138 3' exoribonuclease family, domain 1 L0Z58_04505 PF00586 AIR synthase related protein, N-terminal domain L0Z58_04505 PF02769 AIR synthase related protein, C-terminal domain L0Z58_04505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L0Z58_04520 PF17760 UvrA interaction domain L0Z58_04520 PF17755 UvrA DNA-binding domain L0Z58_04555 PF08245 Mur ligase middle domain L0Z58_04555 PF02875 Mur ligase family, glutamate ligase domain L0Z58_04560 PF01053 Cys/Met metabolism PLP-dependent enzyme L0Z58_04570 PF00012 Hsp70 protein L0Z58_04575 PF00575 S1 RNA binding domain L0Z58_04575 PF10150 Ribonuclease E/G family L0Z58_04575 PF12111 Polyribonucleotide phosphorylase C terminal L0Z58_04580 PF00471 Ribosomal protein L33 L0Z58_04610 PF01297 Zinc-uptake complex component A periplasmic L0Z58_04615 PF00005 ABC transporter L0Z58_04620 PF03109 ABC1 family L0Z58_04670 PF00107 Zinc-binding dehydrogenase L0Z58_04670 PF08240 Alcohol dehydrogenase GroES-like domain L0Z58_04675 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 L0Z58_04680 PF01027 Inhibitor of apoptosis-promoting Bax1 L0Z58_04685 PF00588 SpoU rRNA Methylase family L0Z58_04685 PF08032 RNA 2'-O ribose methyltransferase substrate binding L0Z58_04695 PF02774 Semialdehyde dehydrogenase, dimerisation domain L0Z58_04695 PF01118 Semialdehyde dehydrogenase, NAD binding domain L0Z58_04715 PF13520 Amino acid permease L0Z58_04735 PF13840 ACT domain L0Z58_04735 PF01842 ACT domain L0Z58_04735 PF00696 Amino acid kinase family L0Z58_04750 PF00580 UvrD/REP helicase N-terminal domain L0Z58_04750 PF13361 UvrD-like helicase C-terminal domain L0Z58_04760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L0Z58_04765 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L0Z58_04770 PF00361 Proton-conducting membrane transporter L0Z58_04770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z58_04775 PF00361 Proton-conducting membrane transporter L0Z58_04780 PF00361 Proton-conducting membrane transporter L0Z58_04785 PF03099 Biotin/lipoate A/B protein ligase family L0Z58_04785 PF02237 Biotin protein ligase C terminal domain L0Z58_04785 PF08279 HTH domain L0Z58_04785 PF03099 Biotin/lipoate A/B protein ligase family L0Z58_04785 PF02237 Biotin protein ligase C terminal domain L0Z58_04785 PF08279 HTH domain L0Z58_04795 PF03100 CcmE L0Z58_04825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0Z58_04825 PF10531 SLBB domain L0Z58_04825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0Z58_04830 PF00707 Translation initiation factor IF-3, C-terminal domain L0Z58_04830 PF05198 Translation initiation factor IF-3, N-terminal domain L0Z58_04835 PF03129 Anticodon binding domain L0Z58_04835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0Z58_04835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0Z58_04845 PF12838 4Fe-4S dicluster domain L0Z58_04850 PF01926 50S ribosome-binding GTPase L0Z58_04850 PF10396 GTP-binding protein TrmE N-terminus L0Z58_04850 PF12631 MnmE helical domain L0Z58_04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_04870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L0Z58_04870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L0Z58_04875 PF02504 Fatty acid synthesis protein L0Z58_04880 PF01783 Ribosomal L32p protein family L0Z58_04885 PF02405 Permease MlaE L0Z58_04890 PF00005 ABC transporter L0Z58_04900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L0Z58_04900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L0Z58_04900 PF13288 DXP reductoisomerase C-terminal domain L0Z58_04915 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_04925 PF00266 Aminotransferase class-V L0Z58_04935 PF01523 Putative modulator of DNA gyrase L0Z58_04965 PF01367 5'-3' exonuclease, C-terminal SAM fold L0Z58_04965 PF00476 DNA polymerase family A L0Z58_04965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L0Z58_04970 PF13276 HTH-like domain L0Z58_04970 PF00665 Integrase core domain L0Z58_04970 PF13333 Integrase core domain L0Z58_04975 PF13276 HTH-like domain L0Z58_04975 PF00665 Integrase core domain L0Z58_04975 PF13333 Integrase core domain L0Z58_05005 PF00557 Metallopeptidase family M24 L0Z58_05005 PF01321 Creatinase/Prolidase N-terminal domain L0Z58_05010 PF01134 Glucose inhibited division protein A L0Z58_05010 PF13932 GidA associated domain L0Z58_05020 PF03023 Lipid II flippase MurJ L0Z58_05030 PF04860 Phage portal protein L0Z58_05045 PF03099 Biotin/lipoate A/B protein ligase family L0Z58_05050 PF02016 LD-carboxypeptidase N-terminal domain L0Z58_05050 PF17676 LD-carboxypeptidase C-terminal domain L0Z58_05065 PF00528 Binding-protein-dependent transport system inner membrane component L0Z58_05075 PF01245 Ribosomal protein L19 L0Z58_05080 PF01746 tRNA (Guanine-1)-methyltransferase L0Z58_05085 PF01259 SAICAR synthetase L0Z58_05090 PF02769 AIR synthase related protein, C-terminal domain L0Z58_05090 PF00586 AIR synthase related protein, N-terminal domain L0Z58_05105 PF03471 Transporter associated domain L0Z58_05105 PF00571 CBS domain L0Z58_05110 PF01208 Uroporphyrinogen decarboxylase (URO-D) L0Z58_05115 PF00155 Aminotransferase class I and II L0Z58_05140 PF00464 Serine hydroxymethyltransferase L0Z58_05170 PF01545 Cation efflux family L0Z58_05180 PF02660 Glycerol-3-phosphate acyltransferase L0Z58_05185 PF01235 Sodium:alanine symporter family L0Z58_05190 PF01235 Sodium:alanine symporter family L0Z58_05195 PF01066 CDP-alcohol phosphatidyltransferase L0Z58_05200 PF02666 Phosphatidylserine decarboxylase L0Z58_05205 PF00154 recA bacterial DNA recombination protein L0Z58_05210 PF01556 DnaJ C terminal domain L0Z58_05210 PF00684 DnaJ central domain L0Z58_05210 PF00226 DnaJ domain L0Z58_05215 PF08245 Mur ligase middle domain L0Z58_05215 PF02875 Mur ligase family, glutamate ligase domain L0Z58_05230 PF03364 Polyketide cyclase / dehydrase and lipid transport L0Z58_05235 PF13462 Thioredoxin L0Z58_05265 PF12169 DNA polymerase III subunits gamma and tau domain III L0Z58_05270 PF02575 YbaB/EbfC DNA-binding family L0Z58_05275 PF13505 Outer membrane protein beta-barrel domain L0Z58_05280 PF00140 Sigma-70 factor, region 1.2 L0Z58_05280 PF04542 Sigma-70 region 2 L0Z58_05280 PF04545 Sigma-70, region 4 L0Z58_05290 PF02768 DNA polymerase III beta subunit, C-terminal domain L0Z58_05290 PF02767 DNA polymerase III beta subunit, central domain L0Z58_05290 PF00712 DNA polymerase III beta subunit, N-terminal domain L0Z58_05295 PF01416 tRNA pseudouridine synthase L0Z58_05305 PF02167 Cytochrome C1 family L0Z58_05305 PF00033 Cytochrome b/b6/petB L0Z58_05305 PF00032 Cytochrome b(C-terminal)/b6/petD L0Z58_05310 PF00033 Cytochrome b/b6/petB L0Z58_05310 PF00032 Cytochrome b(C-terminal)/b6/petD L0Z58_05315 PF01556 DnaJ C terminal domain L0Z58_05315 PF00226 DnaJ domain L0Z58_05315 PF00684 DnaJ central domain L0Z58_05325 PF01556 DnaJ C terminal domain L0Z58_05325 PF00684 DnaJ central domain L0Z58_05325 PF00226 DnaJ domain L0Z58_05335 PF03129 Anticodon binding domain L0Z58_05335 PF13393 Histidyl-tRNA synthetase L0Z58_05340 PF01975 Survival protein SurE L0Z58_05345 PF00448 SRP54-type protein, GTPase domain L0Z58_05345 PF02881 SRP54-type protein, helical bundle domain L0Z58_05345 PF02978 Signal peptide binding domain L0Z58_05355 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_05360 PF07977 FabA-like domain L0Z58_05370 PF01103 Surface antigen L0Z58_05370 PF07244 Surface antigen variable number repeat L0Z58_05375 PF17820 PDZ domain L0Z58_05375 PF02163 Peptidase family M50 L0Z58_05390 PF00216 Bacterial DNA-binding protein L0Z58_05395 PF00575 S1 RNA binding domain L0Z58_05400 PF02390 Putative methyltransferase L0Z58_05410 PF01258 Prokaryotic dksA/traR C4-type zinc finger L0Z58_05425 PF01926 50S ribosome-binding GTPase L0Z58_05425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L0Z58_05435 PF03232 Ubiquinone biosynthesis protein COQ7 L0Z58_05445 PF00953 Glycosyl transferase family 4 L0Z58_05450 PF01351 Ribonuclease HII L0Z58_05470 PF00361 Proton-conducting membrane transporter L0Z58_05475 PF01098 Cell cycle protein L0Z58_05480 PF13537 Glutamine amidotransferase domain L0Z58_05480 PF00156 Phosphoribosyl transferase domain L0Z58_05485 PF02245 Methylpurine-DNA glycosylase (MPG) L0Z58_05495 PF17864 RuvB AAA lid domain L0Z58_05495 PF05496 Holliday junction DNA helicase RuvB P-loop domain L0Z58_05495 PF05491 RuvB C-terminal winged helix domain L0Z58_05500 PF07499 RuvA, C-terminal domain L0Z58_05500 PF01330 RuvA N terminal domain L0Z58_05525 PF00579 tRNA synthetases class I (W and Y) L0Z58_05545 PF00293 NUDIX domain L0Z58_05550 PF01026 TatD related DNase L0Z58_05555 PF00056 lactate/malate dehydrogenase, NAD binding domain L0Z58_05555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L0Z58_05560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L0Z58_05565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L0Z58_05570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L0Z58_05575 PF01230 HIT domain L0Z58_05590 PF01225 Mur ligase family, catalytic domain L0Z58_05590 PF02875 Mur ligase family, glutamate ligase domain L0Z58_05590 PF08245 Mur ligase middle domain L0Z58_05595 PF08338 Domain of unknown function (DUF1731) L0Z58_05595 PF01370 NAD dependent epimerase/dehydratase family L0Z58_05610 PF01396 Topoisomerase DNA binding C4 zinc finger L0Z58_05610 PF01131 DNA topoisomerase L0Z58_05610 PF01751 Toprim domain L0Z58_05610 PF13368 Topoisomerase C-terminal repeat L0Z58_05615 PF17773 UPF0176 acylphosphatase like domain L0Z58_05615 PF00581 Rhodanese-like domain L0Z58_05620 PF00528 Binding-protein-dependent transport system inner membrane component L0Z58_05630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) L0Z58_05645 PF04379 ApaG domain L0Z58_05650 PF02222 ATP-grasp domain L0Z58_05650 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L0Z58_05655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L0Z58_05655 PF02542 YgbB family L0Z58_05660 PF01594 AI-2E family transporter L0Z58_05670 PF00589 Phage integrase family L0Z58_05670 PF02899 Phage integrase, N-terminal SAM-like domain L0Z58_05685 PF01649 Ribosomal protein S20 L0Z58_05690 PF00285 Citrate synthase, C-terminal domain L0Z58_05715 PF01039 Carboxyl transferase domain L0Z58_05725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L0Z58_05725 PF06827 Zinc finger found in FPG and IleRS L0Z58_05725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L0Z58_05730 PF01243 Pyridoxamine 5'-phosphate oxidase L0Z58_05730 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L0Z58_05740 PF03772 Competence protein L0Z58_05740 PF00753 Metallo-beta-lactamase superfamily L0Z58_05750 PF00849 RNA pseudouridylate synthase L0Z58_05750 PF01479 S4 domain L0Z58_05755 PF01219 Prokaryotic diacylglycerol kinase L0Z58_05775 PF00162 Phosphoglycerate kinase L0Z58_05785 PF03060 Nitronate monooxygenase L0Z58_05800 PF03135 CagE, TrbE, VirB family, component of type IV transporter system L0Z58_05820 PF00364 Biotin-requiring enzyme L0Z58_05820 PF02817 e3 binding domain L0Z58_05820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L0Z58_05835 PF02132 RecR protein L0Z58_05835 PF13662 Toprim domain L0Z58_05845 PF00334 Nucleoside diphosphate kinase L0Z58_05860 PF00762 Ferrochelatase L0Z58_05875 PF00227 Proteasome subunit L0Z58_05880 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_05880 PF07724 AAA domain (Cdc48 subfamily) L0Z58_05880 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z58_05890 PF00348 Polyprenyl synthetase L0Z58_05895 PF00550 Phosphopantetheine attachment site L0Z58_05900 PF00109 Beta-ketoacyl synthase, N-terminal domain L0Z58_05900 PF02801 Beta-ketoacyl synthase, C-terminal domain L0Z58_05915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0Z58_05920 PF02511 Thymidylate synthase complementing protein L0Z58_05930 PF00270 DEAD/DEAH box helicase L0Z58_05930 PF00271 Helicase conserved C-terminal domain L0Z58_05930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain L0Z58_05930 PF18074 Primosomal protein N C-terminal domain L0Z58_05930 PF17764 3′ DNA-binding domain (3′BD) L0Z58_05935 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal L0Z58_05935 PF00355 Rieske [2Fe-2S] domain L0Z58_05940 PF03989 DNA gyrase C-terminal domain, beta-propeller L0Z58_05940 PF00521 DNA gyrase/topoisomerase IV, subunit A L0Z58_05970 PF02632 BioY family L0Z58_05975 PF00881 Nitroreductase family L0Z58_05980 PF01678 Diaminopimelate epimerase L0Z58_05985 PF02629 CoA binding domain L0Z58_05985 PF00549 CoA-ligase L0Z58_05990 PF00549 CoA-ligase L0Z58_05990 PF08442 ATP-grasp domain L0Z58_06005 PF04452 RNA methyltransferase L0Z58_06020 PF01218 Coproporphyrinogen III oxidase L0Z58_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0Z58_06025 PF00512 His Kinase A (phospho-acceptor) domain L0Z58_06025 PF08448 PAS fold L0Z58_06025 PF13188 PAS domain L0Z58_06025 PF00072 Response regulator receiver domain L0Z58_06030 PF13614 AAA domain L0Z58_06035 PF02195 ParB-like nuclease domain L0Z58_06035 PF17762 HTH domain found in ParB protein L0Z58_06055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L0Z58_06060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit L0Z58_06070 PF00483 Nucleotidyl transferase L0Z58_06070 PF01050 Mannose-6-phosphate isomerase L0Z58_06080 PF00483 Nucleotidyl transferase L0Z58_06080 PF01050 Mannose-6-phosphate isomerase L0Z58_06090 PF02687 FtsX-like permease family L0Z58_06090 PF12704 MacB-like periplasmic core domain L0Z58_06110 PF00231 ATP synthase L0Z58_06115 PF01523 Putative modulator of DNA gyrase L0Z58_06120 PF00313 'Cold-shock' DNA-binding domain L0Z58_06125 PF00270 DEAD/DEAH box helicase L0Z58_06125 PF00271 Helicase conserved C-terminal domain L0Z58_06130 PF02861 Clp amino terminal domain, pathogenicity island component L0Z58_06130 PF10431 C-terminal, D2-small domain, of ClpB protein L0Z58_06130 PF17871 AAA lid domain L0Z58_06130 PF07724 AAA domain (Cdc48 subfamily) L0Z58_06130 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_06135 PF01791 DeoC/LacD family aldolase L0Z58_06145 PF01180 Dihydroorotate dehydrogenase L0Z58_06150 PF00035 Double-stranded RNA binding motif L0Z58_06150 PF14622 Ribonuclease-III-like L0Z58_06165 PF13091 PLD-like domain L0Z58_06190 PF00210 Ferritin-like domain L0Z58_06200 PF00999 Sodium/hydrogen exchanger family L0Z58_06200 PF02254 TrkA-N domain L0Z58_06210 PF02223 Thymidylate kinase L0Z58_06220 PF01434 Peptidase family M41 L0Z58_06220 PF06480 FtsH Extracellular L0Z58_06220 PF17862 AAA+ lid domain L0Z58_06220 PF00004 ATPase family associated with various cellular activities (AAA) L0Z58_06225 PF01171 PP-loop family L0Z58_06230 PF00691 OmpA family L0Z58_06260 PF00719 Inorganic pyrophosphatase L0Z58_06275 PF00639 PPIC-type PPIASE domain L0Z58_06275 PF09312 SurA N-terminal domain L0Z58_06280 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0Z58_06310 PF03717 Penicillin-binding Protein dimerisation domain L0Z58_06310 PF00905 Penicillin binding protein transpeptidase domain L0Z58_06315 PF02401 LytB protein L0Z58_06325 PF00183 Hsp90 protein L0Z58_06335 PF00155 Aminotransferase class I and II L0Z58_06345 PF01132 Elongation factor P (EF-P) OB domain L0Z58_06345 PF08207 Elongation factor P (EF-P) KOW-like domain L0Z58_06345 PF09285 Elongation factor P, C-terminal L0Z58_06350 PF05239 PRC-barrel domain L0Z58_06350 PF01782 RimM N-terminal domain L0Z58_06355 PF00202 Aminotransferase class-III L0Z58_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0Z58_06360 PF00512 His Kinase A (phospho-acceptor) domain L0Z58_06360 PF00989 PAS fold L0Z58_06365 PF00578 AhpC/TSA family L0Z58_06370 PF02463 RecF/RecN/SMC N terminal domain L0Z58_06395 PF03631 Virulence factor BrkB L0Z58_06410 PF02142 MGS-like domain L0Z58_06410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0Z58_06410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L0Z58_06430 PF04545 Sigma-70, region 4 L0Z58_06430 PF04539 Sigma-70 region 3 L0Z58_06430 PF04542 Sigma-70 region 2 L0Z58_06430 PF00140 Sigma-70 factor, region 1.2 L0Z58_06430 PF03979 Sigma-70 factor, region 1.1 L0Z58_06430 PF04546 Sigma-70, non-essential region L0Z58_06435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L0Z58_06445 PF13244 Domain of unknown function (DUF4040) L0Z58_06445 PF00361 Proton-conducting membrane transporter L0Z58_06445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L0Z58_06450 PF03334 Na+/H+ antiporter subunit L0Z58_06460 PF01192 RNA polymerase Rpb6 L0Z58_06470 PF00731 AIR carboxylase L0Z58_06475 PF08676 MutL C terminal dimerisation domain L0Z58_06475 PF01119 DNA mismatch repair protein, C-terminal domain L0Z58_06480 PF16870 2-oxoglutarate dehydrogenase C-terminal L0Z58_06480 PF16078 2-oxoglutarate dehydrogenase N-terminus L0Z58_06480 PF02779 Transketolase, pyrimidine binding domain L0Z58_06480 PF00676 Dehydrogenase E1 component L0Z58_06505 PF13784 Fic/DOC family N-terminal L0Z58_06505 PF02661 Fic/DOC family L0Z58_06510 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase L0Z58_06515 PF01040 UbiA prenyltransferase family L0Z58_06520 PF02033 Ribosome-binding factor A L0Z58_06525 PF00009 Elongation factor Tu GTP binding domain L0Z58_06525 PF11987 Translation-initiation factor 2 L0Z58_06525 PF04760 Translation initiation factor IF-2, N-terminal region L0Z58_06530 PF08529 NusA N-terminal domain L0Z58_06530 PF13184 NusA-like KH domain L0Z58_06530 PF00575 S1 RNA binding domain L0Z58_06535 PF00873 AcrB/AcrD/AcrF family L0Z58_06545 PF00120 Glutamine synthetase, catalytic domain