locus-tag class description JSQ73_000020 PF00120 Glutamine synthetase, catalytic domain JSQ73_000025 PF00308 Bacterial dnaA protein JSQ73_000025 PF08299 Bacterial dnaA protein helix-turn-helix JSQ73_000025 PF11638 DnaA N-terminal domain JSQ73_000030 PF07549 SecD/SecF GG Motif JSQ73_000030 PF02355 Protein export membrane protein JSQ73_000040 PF02096 60Kd inner membrane protein JSQ73_000040 PF14849 YidC periplasmic domain JSQ73_000045 PF00885 6,7-dimethyl-8-ribityllumazine synthase JSQ73_000050 PF01029 NusB family JSQ73_000060 PF00692 dUTPase JSQ73_000085 PF01648 4'-phosphopantetheinyl transferase superfamily JSQ73_000090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_000090 PF03129 Anticodon binding domain JSQ73_000110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JSQ73_000110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JSQ73_000110 PF13288 DXP reductoisomerase C-terminal domain JSQ73_000125 PF00005 ABC transporter JSQ73_000130 PF05173 Dihydrodipicolinate reductase, C-terminus JSQ73_000130 PF01113 Dihydrodipicolinate reductase, N-terminus JSQ73_000145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JSQ73_000165 PF08264 Anticodon-binding domain of tRNA JSQ73_000165 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_000175 PF00115 Cytochrome C and Quinol oxidase polypeptide I JSQ73_000190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ73_000190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_000195 PF00589 Phage integrase family JSQ73_000195 PF02899 Phage integrase, N-terminal SAM-like domain JSQ73_000200 PF02934 GatB/GatE catalytic domain JSQ73_000200 PF02637 GatB domain JSQ73_000205 PF00676 Dehydrogenase E1 component JSQ73_000210 PF03653 Uncharacterised protein family (UPF0093) JSQ73_000215 PF00529 HlyD membrane-fusion protein of T1SS JSQ73_000215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JSQ73_000220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JSQ73_000220 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JSQ73_000225 PF00115 Cytochrome C and Quinol oxidase polypeptide I JSQ73_000230 PF01040 UbiA prenyltransferase family JSQ73_000235 PF00075 RNase H JSQ73_000245 PF01406 tRNA synthetases class I (C) catalytic domain JSQ73_000245 PF09190 DALR domain JSQ73_000250 PF06055 Exopolysaccharide synthesis, ExoD JSQ73_000255 PF02416 mttA/Hcf106 family JSQ73_000260 PF00005 ABC transporter JSQ73_000260 PF08402 TOBE domain JSQ73_000280 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JSQ73_000290 PF01926 50S ribosome-binding GTPase JSQ73_000290 PF06071 Protein of unknown function (DUF933) JSQ73_000310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ73_000310 PF00364 Biotin-requiring enzyme JSQ73_000310 PF02817 e3 binding domain JSQ73_000395 PF02896 PEP-utilising enzyme, TIM barrel domain JSQ73_000395 PF00391 PEP-utilising enzyme, mobile domain JSQ73_000395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JSQ73_000400 PF04002 RadC-like JAB domain JSQ73_000405 PF01381 Helix-turn-helix JSQ73_000475 PF04055 Radical SAM superfamily JSQ73_000475 PF00919 Uncharacterized protein family UPF0004 JSQ73_000510 PF17864 RuvB AAA lid domain JSQ73_000510 PF05491 RuvB C-terminal winged helix domain JSQ73_000510 PF05496 Holliday junction DNA helicase RuvB P-loop domain JSQ73_000515 PF07499 RuvA, C-terminal domain JSQ73_000515 PF01330 RuvA N terminal domain JSQ73_000520 PF00034 Cytochrome c JSQ73_000530 PF00580 UvrD/REP helicase N-terminal domain JSQ73_000530 PF13361 UvrD-like helicase C-terminal domain JSQ73_000540 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JSQ73_000545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JSQ73_000550 PF00361 Proton-conducting membrane transporter JSQ73_000550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JSQ73_000555 PF00361 Proton-conducting membrane transporter JSQ73_000560 PF00361 Proton-conducting membrane transporter JSQ73_000565 PF02237 Biotin protein ligase C terminal domain JSQ73_000565 PF03099 Biotin/lipoate A/B protein ligase family JSQ73_000570 PF03100 CcmE JSQ73_000605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JSQ73_000605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JSQ73_000605 PF10531 SLBB domain JSQ73_000610 PF00707 Translation initiation factor IF-3, C-terminal domain JSQ73_000610 PF05198 Translation initiation factor IF-3, N-terminal domain JSQ73_000615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ73_000615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_000615 PF03129 Anticodon binding domain JSQ73_000620 PF12838 4Fe-4S dicluster domain JSQ73_000625 PF01926 50S ribosome-binding GTPase JSQ73_000625 PF12631 MnmE helical domain JSQ73_000625 PF10396 GTP-binding protein TrmE N-terminus JSQ73_000635 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_000650 PF00266 Aminotransferase class-V JSQ73_000655 PF01098 Cell cycle protein JSQ73_000660 PF00361 Proton-conducting membrane transporter JSQ73_000690 PF01255 Putative undecaprenyl diphosphate synthase JSQ73_000705 PF01467 Cytidylyltransferase-like JSQ73_000720 PF01494 FAD binding domain JSQ73_000730 PF03330 Lytic transglycolase JSQ73_000735 PF08245 Mur ligase middle domain JSQ73_000735 PF01225 Mur ligase family, catalytic domain JSQ73_000735 PF02875 Mur ligase family, glutamate ligase domain JSQ73_000745 PF07690 Major Facilitator Superfamily JSQ73_000775 PF03462 PCRF domain JSQ73_000775 PF00472 RF-1 domain JSQ73_000780 PF01926 50S ribosome-binding GTPase JSQ73_000785 PF00696 Amino acid kinase family JSQ73_000795 PF00709 Adenylosuccinate synthetase JSQ73_000820 PF01176 Translation initiation factor 1A / IF-1 JSQ73_000825 PF02545 Maf-like protein JSQ73_000850 PF01235 Sodium:alanine symporter family JSQ73_000860 PF00118 TCP-1/cpn60 chaperonin family JSQ73_000865 PF00166 Chaperonin 10 Kd subunit JSQ73_000870 PF01571 Aminomethyltransferase folate-binding domain JSQ73_000880 PF00268 Ribonucleotide reductase, small chain JSQ73_000900 PF02565 Recombination protein O C terminal JSQ73_000900 PF11967 Recombination protein O N terminal JSQ73_000905 PF00990 Diguanylate cyclase, GGDEF domain JSQ73_000905 PF00072 Response regulator receiver domain JSQ73_000915 PF05088 Bacterial NAD-glutamate dehydrogenase JSQ73_000920 PF17871 AAA lid domain JSQ73_000920 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_000920 PF02861 Clp amino terminal domain, pathogenicity island component JSQ73_000920 PF07724 AAA domain (Cdc48 subfamily) JSQ73_000920 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_000955 PF01258 Prokaryotic dksA/traR C4-type zinc finger JSQ73_000975 PF00814 Glycoprotease family JSQ73_000985 PF08241 Methyltransferase domain JSQ73_000990 PF01807 CHC2 zinc finger JSQ73_000990 PF13662 Toprim domain JSQ73_000990 PF08275 DNA primase catalytic core, N-terminal domain JSQ73_001000 PF00111 2Fe-2S iron-sulfur cluster binding domain JSQ73_001010 PF03918 Cytochrome C biogenesis protein JSQ73_001015 PF13361 UvrD-like helicase C-terminal domain JSQ73_001015 PF00580 UvrD/REP helicase N-terminal domain JSQ73_001015 PF12705 PD-(D/E)XK nuclease superfamily JSQ73_001020 PF08544 GHMP kinases C terminal JSQ73_001020 PF00288 GHMP kinases N terminal domain JSQ73_001030 PF00950 ABC 3 transport family JSQ73_001045 PF00749 tRNA synthetases class I (E and Q), catalytic domain JSQ73_001050 PF00679 Elongation factor G C-terminus JSQ73_001050 PF00009 Elongation factor Tu GTP binding domain JSQ73_001050 PF03144 Elongation factor Tu domain 2 JSQ73_001055 PF13735 tRNA nucleotidyltransferase domain 2 putative JSQ73_001055 PF12627 Probable RNA and SrmB- binding site of polymerase A JSQ73_001055 PF01743 Poly A polymerase head domain JSQ73_001085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JSQ73_001085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JSQ73_001090 PF00902 Sec-independent protein translocase protein (TatC) JSQ73_001100 PF10417 C-terminal domain of 1-Cys peroxiredoxin JSQ73_001100 PF00578 AhpC/TSA family JSQ73_001105 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_001115 PF03109 ABC1 family JSQ73_001120 PF00005 ABC transporter JSQ73_001125 PF01297 Zinc-uptake complex component A periplasmic JSQ73_001130 PF00471 Ribosomal protein L33 JSQ73_001135 PF00575 S1 RNA binding domain JSQ73_001135 PF12111 Polyribonucleotide phosphorylase C terminal JSQ73_001135 PF10150 Ribonuclease E/G family JSQ73_001140 PF00012 Hsp70 protein JSQ73_001145 PF01722 BolA-like protein JSQ73_001150 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ73_001155 PF08245 Mur ligase middle domain JSQ73_001155 PF02875 Mur ligase family, glutamate ligase domain JSQ73_001170 PF01300 Telomere recombination JSQ73_001175 PF09115 DNA polymerase III, delta subunit, C terminal JSQ73_001195 PF00361 Proton-conducting membrane transporter JSQ73_001200 PF00772 DnaB-like helicase N terminal domain JSQ73_001200 PF03796 DnaB-like helicase C terminal domain JSQ73_001230 PF01979 Amidohydrolase family JSQ73_001235 PF01612 3'-5' exonuclease JSQ73_001235 PF00570 HRDC domain JSQ73_001240 PF01121 Dephospho-CoA kinase JSQ73_001260 PF09334 tRNA synthetases class I (M) JSQ73_001260 PF08264 Anticodon-binding domain of tRNA JSQ73_001415 PF01043 SecA preprotein cross-linking domain JSQ73_001415 PF07517 SecA DEAD-like domain JSQ73_001415 PF07516 SecA Wing and Scaffold domain JSQ73_001455 PF08245 Mur ligase middle domain JSQ73_001485 PF09312 SurA N-terminal domain JSQ73_001490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_001660 PF00121 Triosephosphate isomerase JSQ73_001670 PF00398 Ribosomal RNA adenine dimethylase JSQ73_001675 PF00478 IMP dehydrogenase / GMP reductase domain JSQ73_001675 PF00571 CBS domain JSQ73_001680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_001680 PF07497 Rho termination factor, RNA-binding domain JSQ73_001680 PF07498 Rho termination factor, N-terminal domain JSQ73_001700 PF07690 Major Facilitator Superfamily JSQ73_001700 PF00083 Sugar (and other) transporter JSQ73_001705 PF18073 Rubredoxin metal binding domain JSQ73_001710 PF00448 SRP54-type protein, GTPase domain JSQ73_001710 PF02881 SRP54-type protein, helical bundle domain JSQ73_001715 PF01592 NifU-like N terminal domain JSQ73_001720 PF01521 Iron-sulphur cluster biosynthesis JSQ73_001725 PF07743 HSCB C-terminal oligomerisation domain JSQ73_001730 PF00012 Hsp70 protein JSQ73_001735 PF10502 Signal peptidase, peptidase S26 JSQ73_001745 PF00364 Biotin-requiring enzyme JSQ73_001745 PF02780 Transketolase, C-terminal domain JSQ73_001745 PF02779 Transketolase, pyrimidine binding domain JSQ73_001830 PF00925 GTP cyclohydrolase II JSQ73_001830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JSQ73_001835 PF01272 Transcription elongation factor, GreA/GreB, C-term JSQ73_001835 PF03449 Transcription elongation factor, N-terminal JSQ73_001840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_001840 PF00306 ATP synthase alpha/beta chain, C terminal domain JSQ73_001840 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ73_001845 PF00213 ATP synthase delta (OSCP) subunit JSQ73_001850 PF02021 Uncharacterised protein family UPF0102 JSQ73_001855 PF01196 Ribosomal protein L17 JSQ73_001860 PF01000 RNA polymerase Rpb3/RpoA insert domain JSQ73_001860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JSQ73_001860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JSQ73_001865 PF00411 Ribosomal protein S11 JSQ73_001870 PF00416 Ribosomal protein S13/S18 JSQ73_001880 PF00344 SecY translocase JSQ73_001885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JSQ73_001890 PF03719 Ribosomal protein S5, C-terminal domain JSQ73_001890 PF00333 Ribosomal protein S5, N-terminal domain JSQ73_001895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JSQ73_001900 PF00347 Ribosomal protein L6 JSQ73_001905 PF00410 Ribosomal protein S8 JSQ73_001910 PF00253 Ribosomal protein S14p/S29e JSQ73_001915 PF00673 ribosomal L5P family C-terminus JSQ73_001915 PF00281 Ribosomal protein L5 JSQ73_001920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JSQ73_001925 PF00238 Ribosomal protein L14p/L23e JSQ73_001930 PF00366 Ribosomal protein S17 JSQ73_001935 PF00831 Ribosomal L29 protein JSQ73_001940 PF00252 Ribosomal protein L16p/L10e JSQ73_001945 PF07650 KH domain JSQ73_001945 PF00189 Ribosomal protein S3, C-terminal domain JSQ73_001950 PF00237 Ribosomal protein L22p/L17e JSQ73_001955 PF00203 Ribosomal protein S19 JSQ73_001960 PF00181 Ribosomal Proteins L2, RNA binding domain JSQ73_001960 PF03947 Ribosomal Proteins L2, C-terminal domain JSQ73_001965 PF00276 Ribosomal protein L23 JSQ73_001970 PF00573 Ribosomal protein L4/L1 family JSQ73_001975 PF00297 Ribosomal protein L3 JSQ73_001980 PF00338 Ribosomal protein S10p/S20e JSQ73_001990 PF00156 Phosphoribosyl transferase domain JSQ73_001995 PF00375 Sodium:dicarboxylate symporter family JSQ73_002000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JSQ73_002000 PF01565 FAD binding domain JSQ73_002005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JSQ73_002005 PF03900 Porphobilinogen deaminase, C-terminal domain JSQ73_002015 PF02355 Protein export membrane protein JSQ73_002035 PF17191 RecG wedge domain JSQ73_002035 PF00271 Helicase conserved C-terminal domain JSQ73_002035 PF00270 DEAD/DEAH box helicase JSQ73_002045 PF00444 Ribosomal protein L36 JSQ73_002050 PF03618 Kinase/pyrophosphorylase JSQ73_002055 PF01578 Cytochrome C assembly protein JSQ73_002080 PF00117 Glutamine amidotransferase class-I JSQ73_002080 PF00958 GMP synthase C terminal domain JSQ73_002080 PF02540 NAD synthase JSQ73_002085 PF03471 Transporter associated domain JSQ73_002085 PF03741 Integral membrane protein TerC family JSQ73_002105 PF03144 Elongation factor Tu domain 2 JSQ73_002105 PF06421 GTP-binding protein LepA C-terminus JSQ73_002105 PF00009 Elongation factor Tu GTP binding domain JSQ73_002105 PF14492 Elongation Factor G, domain II JSQ73_002105 PF00679 Elongation factor G C-terminus JSQ73_002120 PF00462 Glutaredoxin JSQ73_002125 PF06574 FAD synthetase JSQ73_002125 PF01687 Riboflavin kinase JSQ73_002130 PF01252 Signal peptidase (SPase) II JSQ73_002135 PF05193 Peptidase M16 inactive domain JSQ73_002135 PF00675 Insulinase (Peptidase family M16) JSQ73_002145 PF00551 Formyl transferase JSQ73_002175 PF01668 SmpB protein JSQ73_002180 PF01790 Prolipoprotein diacylglyceryl transferase JSQ73_002190 PF13091 PLD-like domain JSQ73_002195 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JSQ73_002230 PF02779 Transketolase, pyrimidine binding domain JSQ73_002230 PF16870 2-oxoglutarate dehydrogenase C-terminal JSQ73_002230 PF00676 Dehydrogenase E1 component JSQ73_002230 PF16078 2-oxoglutarate dehydrogenase N-terminus JSQ73_002260 PF01820 D-ala D-ala ligase N-terminus JSQ73_002260 PF07478 D-ala D-ala ligase C-terminus JSQ73_002270 PF00037 4Fe-4S binding domain JSQ73_002270 PF11953 Domain of unknown function (DUF3470) JSQ73_002275 PF17782 DprA winged helix domain JSQ73_002275 PF02481 DNA recombination-mediator protein A JSQ73_002305 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_002305 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_002305 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JSQ73_002315 PF02910 Fumarate reductase flavoprotein C-term JSQ73_002315 PF00890 FAD binding domain JSQ73_002330 PF00625 Guanylate kinase JSQ73_002345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JSQ73_002345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JSQ73_002350 PF13416 Bacterial extracellular solute-binding protein JSQ73_002360 PF01513 ATP-NAD kinase JSQ73_002365 PF01197 Ribosomal protein L31 JSQ73_002370 PF00698 Acyl transferase domain JSQ73_002375 PF01676 Metalloenzyme superfamily JSQ73_002375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JSQ73_002390 PF02272 DHHA1 domain JSQ73_002390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ73_002390 PF01411 tRNA synthetases class II (A) JSQ73_002410 PF01632 Ribosomal protein L35 JSQ73_002415 PF00453 Ribosomal protein L20 JSQ73_002420 PF00551 Formyl transferase JSQ73_002420 PF02911 Formyl transferase, C-terminal domain JSQ73_002430 PF01808 AICARFT/IMPCHase bienzyme JSQ73_002430 PF02142 MGS-like domain JSQ73_002445 PF10576 Iron-sulfur binding domain of endonuclease III JSQ73_002445 PF00633 Helix-hairpin-helix motif JSQ73_002445 PF00730 HhH-GPD superfamily base excision DNA repair protein JSQ73_002465 PF00886 Ribosomal protein S16 JSQ73_002470 PF00348 Polyprenyl synthetase JSQ73_002475 PF01025 GrpE JSQ73_002480 PF00579 tRNA synthetases class I (W and Y) JSQ73_002520 PF00892 EamA-like transporter family JSQ73_002525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JSQ73_002525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JSQ73_002525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JSQ73_002535 PF01212 Beta-eliminating lyase JSQ73_002540 PF01212 Beta-eliminating lyase JSQ73_002545 PF00664 ABC transporter transmembrane region JSQ73_002545 PF00005 ABC transporter JSQ73_002565 PF01370 NAD dependent epimerase/dehydratase family JSQ73_002570 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_002570 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_002570 PF12804 MobA-like NTP transferase domain JSQ73_002640 PF16198 tRNA pseudouridylate synthase B C-terminal domain JSQ73_002640 PF01509 TruB family pseudouridylate synthase (N terminal domain) JSQ73_002645 PF16198 tRNA pseudouridylate synthase B C-terminal domain JSQ73_002645 PF01509 TruB family pseudouridylate synthase (N terminal domain) JSQ73_002650 PF00312 Ribosomal protein S15 JSQ73_002655 PF00013 KH domain JSQ73_002655 PF03725 3' exoribonuclease family, domain 2 JSQ73_002655 PF00575 S1 RNA binding domain JSQ73_002655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JSQ73_002655 PF01138 3' exoribonuclease family, domain 1 JSQ73_002660 PF00834 Ribulose-phosphate 3 epimerase family JSQ73_002685 PF00162 Phosphoglycerate kinase JSQ73_002690 PF00464 Serine hydroxymethyltransferase JSQ73_002710 PF00155 Aminotransferase class I and II JSQ73_002720 PF07517 SecA DEAD-like domain JSQ73_002720 PF07516 SecA Wing and Scaffold domain JSQ73_002720 PF01043 SecA preprotein cross-linking domain JSQ73_002720 PF02810 SEC-C motif JSQ73_002730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JSQ73_002760 PF02646 RmuC family JSQ73_002765 PF07943 Penicillin-binding protein 5, C-terminal domain JSQ73_002765 PF00768 D-alanyl-D-alanine carboxypeptidase JSQ73_002790 PF01208 Uroporphyrinogen decarboxylase (URO-D) JSQ73_002800 PF00571 CBS domain JSQ73_002800 PF03471 Transporter associated domain JSQ73_002825 PF00231 ATP synthase JSQ73_002830 PF01523 Putative modulator of DNA gyrase JSQ73_002835 PF00313 'Cold-shock' DNA-binding domain JSQ73_002840 PF00270 DEAD/DEAH box helicase JSQ73_002840 PF00271 Helicase conserved C-terminal domain JSQ73_002905 PF04002 RadC-like JAB domain JSQ73_002980 PF00180 Isocitrate/isopropylmalate dehydrogenase JSQ73_002980 PF18324 Hypothetical protein TT1725 JSQ73_002990 PF02844 Phosphoribosylglycinamide synthetase, N domain JSQ73_002990 PF02843 Phosphoribosylglycinamide synthetase, C domain JSQ73_002990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JSQ73_002995 PF02403 Seryl-tRNA synthetase N-terminal domain JSQ73_002995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_003005 PF01207 Dihydrouridine synthase (Dus) JSQ73_003010 PF10385 RNA polymerase beta subunit external 1 domain JSQ73_003010 PF00562 RNA polymerase Rpb2, domain 6 JSQ73_003010 PF04560 RNA polymerase Rpb2, domain 7 JSQ73_003010 PF04565 RNA polymerase Rpb2, domain 3 JSQ73_003010 PF04561 RNA polymerase Rpb2, domain 2 JSQ73_003010 PF04563 RNA polymerase beta subunit JSQ73_003010 PF04998 RNA polymerase Rpb1, domain 5 JSQ73_003010 PF05000 RNA polymerase Rpb1, domain 4 JSQ73_003010 PF04983 RNA polymerase Rpb1, domain 3 JSQ73_003010 PF00623 RNA polymerase Rpb1, domain 2 JSQ73_003010 PF04997 RNA polymerase Rpb1, domain 1 JSQ73_003015 PF16320 Ribosomal protein L7/L12 dimerisation domain JSQ73_003015 PF00542 Ribosomal protein L7/L12 C-terminal domain JSQ73_003020 PF00466 Ribosomal protein L10 JSQ73_003025 PF00687 Ribosomal protein L1p/L10e family JSQ73_003030 PF00298 Ribosomal protein L11, RNA binding domain JSQ73_003030 PF03946 Ribosomal protein L11, N-terminal domain JSQ73_003035 PF00467 KOW motif JSQ73_003035 PF02357 Transcription termination factor nusG JSQ73_003070 PF12327 FtsZ family, C-terminal domain JSQ73_003070 PF00091 Tubulin/FtsZ family, GTPase domain JSQ73_003085 PF02130 Uncharacterized protein family UPF0054 JSQ73_003090 PF13085 2Fe-2S iron-sulfur cluster binding domain JSQ73_003110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JSQ73_003110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JSQ73_003115 PF00486 Transcriptional regulatory protein, C terminal JSQ73_003115 PF00072 Response regulator receiver domain JSQ73_003135 PF01702 Queuine tRNA-ribosyltransferase JSQ73_003145 PF00675 Insulinase (Peptidase family M16) JSQ73_003145 PF05193 Peptidase M16 inactive domain JSQ73_003150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JSQ73_003150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JSQ73_003165 PF03764 Elongation factor G, domain IV JSQ73_003165 PF00009 Elongation factor Tu GTP binding domain JSQ73_003165 PF03144 Elongation factor Tu domain 2 JSQ73_003165 PF14492 Elongation Factor G, domain II JSQ73_003165 PF00679 Elongation factor G C-terminus JSQ73_003170 PF00177 Ribosomal protein S7p/S5e JSQ73_003175 PF00164 Ribosomal protein S12/S23 JSQ73_003180 PF02390 Putative methyltransferase JSQ73_003180 PF05175 Methyltransferase small domain JSQ73_003180 PF17827 PrmC N-terminal domain JSQ73_003190 PF04972 BON domain JSQ73_003205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JSQ73_003205 PF05698 Bacterial trigger factor protein (TF) C-terminus JSQ73_003205 PF05697 Bacterial trigger factor protein (TF) JSQ73_003210 PF00574 Clp protease JSQ73_003215 PF06689 ClpX C4-type zinc finger JSQ73_003215 PF07724 AAA domain (Cdc48 subfamily) JSQ73_003215 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_003220 PF05362 Lon protease (S16) C-terminal proteolytic domain JSQ73_003220 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_003220 PF02190 ATP-dependent protease La (LON) substrate-binding domain JSQ73_003225 PF03717 Penicillin-binding Protein dimerisation domain JSQ73_003225 PF00905 Penicillin binding protein transpeptidase domain JSQ73_003230 PF01522 Polysaccharide deacetylase JSQ73_003255 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_003260 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_003265 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_003270 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JSQ73_003280 PF01921 tRNA synthetases class I (K) JSQ73_003290 PF01728 FtsJ-like methyltransferase JSQ73_003295 PF10691 Protein of unknown function (DUF2497) JSQ73_003305 PF00572 Ribosomal protein L13 JSQ73_003310 PF00380 Ribosomal protein S9/S16 JSQ73_003320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JSQ73_003325 PF00011 Hsp20/alpha crystallin family JSQ73_003330 PF00749 tRNA synthetases class I (E and Q), catalytic domain JSQ73_003340 PF00364 Biotin-requiring enzyme JSQ73_003340 PF18140 Propionyl-coenzyme A carboxylase BT domain JSQ73_003340 PF02785 Biotin carboxylase C-terminal domain JSQ73_003340 PF00289 Biotin carboxylase, N-terminal domain JSQ73_003340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ73_003345 PF02628 Cytochrome oxidase assembly protein JSQ73_003365 PF00137 ATP synthase subunit C JSQ73_003370 PF00119 ATP synthase A chain JSQ73_003380 PF03483 B3/4 domain JSQ73_003380 PF03147 Ferredoxin-fold anticodon binding domain JSQ73_003380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JSQ73_003380 PF01588 Putative tRNA binding domain JSQ73_003380 PF03484 tRNA synthetase B5 domain JSQ73_003390 PF08264 Anticodon-binding domain of tRNA JSQ73_003390 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_003395 PF00919 Uncharacterized protein family UPF0004 JSQ73_003395 PF01938 TRAM domain JSQ73_003395 PF04055 Radical SAM superfamily JSQ73_003405 PF02272 DHHA1 domain JSQ73_003405 PF01368 DHH family JSQ73_003405 PF17768 RecJ OB domain JSQ73_003410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JSQ73_003420 PF03060 Nitronate monooxygenase JSQ73_003440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JSQ73_003475 PF01321 Creatinase/Prolidase N-terminal domain JSQ73_003475 PF00557 Metallopeptidase family M24 JSQ73_003480 PF01134 Glucose inhibited division protein A JSQ73_003480 PF13932 GidA associated domain JSQ73_003495 PF03023 Lipid II flippase MurJ JSQ73_003525 PF03099 Biotin/lipoate A/B protein ligase family JSQ73_003530 PF02016 LD-carboxypeptidase N-terminal domain JSQ73_003530 PF17676 LD-carboxypeptidase C-terminal domain JSQ73_003540 PF07733 Bacterial DNA polymerase III alpha NTPase domain JSQ73_003540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JSQ73_003540 PF14579 Helix-hairpin-helix motif JSQ73_003540 PF02811 PHP domain JSQ73_003545 PF01250 Ribosomal protein S6 JSQ73_003550 PF01084 Ribosomal protein S18 JSQ73_003555 PF03948 Ribosomal protein L9, C-terminal domain JSQ73_003555 PF01281 Ribosomal protein L9, N-terminal domain JSQ73_003560 PF10397 Adenylosuccinate lyase C-terminus JSQ73_003560 PF00206 Lyase JSQ73_003575 PF13685 Iron-containing alcohol dehydrogenase JSQ73_003580 PF01546 Peptidase family M20/M25/M40 JSQ73_003580 PF07687 Peptidase dimerisation domain JSQ73_003615 PF00186 Dihydrofolate reductase JSQ73_003620 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JSQ73_003620 PF00809 Pterin binding enzyme JSQ73_003630 PF03070 TENA/THI-4/PQQC family JSQ73_003645 PF00085 Thioredoxin JSQ73_003665 PF01926 50S ribosome-binding GTPase JSQ73_003665 PF07650 KH domain JSQ73_003720 PF00581 Rhodanese-like domain JSQ73_003720 PF17773 UPF0176 acylphosphatase like domain JSQ73_003725 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_003730 PF04379 ApaG domain JSQ73_003735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JSQ73_003735 PF02222 ATP-grasp domain JSQ73_003740 PF01118 Semialdehyde dehydrogenase, NAD binding domain JSQ73_003740 PF02774 Semialdehyde dehydrogenase, dimerisation domain JSQ73_003750 PF00324 Amino acid permease JSQ73_003755 PF13520 Amino acid permease JSQ73_003765 PF01975 Survival protein SurE JSQ73_003770 PF03129 Anticodon binding domain JSQ73_003770 PF13393 Histidyl-tRNA synthetase JSQ73_003775 PF01106 NifU-like domain JSQ73_003780 PF00226 DnaJ domain JSQ73_003780 PF00684 DnaJ central domain JSQ73_003780 PF01556 DnaJ C terminal domain JSQ73_003810 PF00033 Cytochrome b/b6/petB JSQ73_003810 PF00032 Cytochrome b(C-terminal)/b6/petD JSQ73_003815 PF00032 Cytochrome b(C-terminal)/b6/petD JSQ73_003815 PF02167 Cytochrome C1 family JSQ73_003815 PF00033 Cytochrome b/b6/petB JSQ73_003820 PF00271 Helicase conserved C-terminal domain JSQ73_003820 PF12344 Ultra-violet resistance protein B JSQ73_003820 PF02151 UvrB/uvrC motif JSQ73_003820 PF04851 Type III restriction enzyme, res subunit JSQ73_003820 PF17757 UvrB interaction domain JSQ73_003830 PF00216 Bacterial DNA-binding protein JSQ73_003840 PF01551 Peptidase family M23 JSQ73_003845 PF08264 Anticodon-binding domain of tRNA JSQ73_003845 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_003845 PF09334 tRNA synthetases class I (M) JSQ73_003845 PF13603 Leucyl-tRNA synthetase, Domain 2 JSQ73_003860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JSQ73_003860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JSQ73_003865 PF02441 Flavoprotein JSQ73_003870 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) JSQ73_003875 PF03471 Transporter associated domain JSQ73_003875 PF00571 CBS domain JSQ73_003875 PF01595 Cyclin M transmembrane N-terminal domain JSQ73_003880 PF00202 Aminotransferase class-III JSQ73_003885 PF00334 Nucleoside diphosphate kinase JSQ73_003895 PF00762 Ferrochelatase JSQ73_003910 PF00227 Proteasome subunit JSQ73_003915 PF07724 AAA domain (Cdc48 subfamily) JSQ73_003915 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_003915 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_003925 PF00348 Polyprenyl synthetase JSQ73_003930 PF00550 Phosphopantetheine attachment site JSQ73_003935 PF02801 Beta-ketoacyl synthase, C-terminal domain JSQ73_003935 PF00109 Beta-ketoacyl synthase, N-terminal domain JSQ73_003940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JSQ73_003945 PF02511 Thymidylate synthase complementing protein JSQ73_003975 PF00270 DEAD/DEAH box helicase JSQ73_003975 PF17764 3′ DNA-binding domain (3′BD) JSQ73_003975 PF18074 Primosomal protein N C-terminal domain JSQ73_003975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JSQ73_003995 PF02132 RecR protein JSQ73_003995 PF13662 Toprim domain JSQ73_004005 PF00183 Hsp90 protein JSQ73_004035 PF00155 Aminotransferase class I and II JSQ73_004045 PF01132 Elongation factor P (EF-P) OB domain JSQ73_004045 PF08207 Elongation factor P (EF-P) KOW-like domain JSQ73_004045 PF09285 Elongation factor P, C-terminal JSQ73_004050 PF01782 RimM N-terminal domain JSQ73_004050 PF05239 PRC-barrel domain JSQ73_004060 PF00202 Aminotransferase class-III JSQ73_004065 PF00512 His Kinase A (phospho-acceptor) domain JSQ73_004065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_004065 PF00989 PAS fold JSQ73_004065 PF13426 PAS domain JSQ73_004065 PF13188 PAS domain JSQ73_004075 PF00814 Glycoprotease family JSQ73_004085 PF00005 ABC transporter JSQ73_004085 PF00664 ABC transporter transmembrane region JSQ73_004095 PF00364 Biotin-requiring enzyme JSQ73_004095 PF02817 e3 binding domain JSQ73_004095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ73_004115 PF01434 Peptidase family M41 JSQ73_004115 PF06480 FtsH Extracellular JSQ73_004115 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_004115 PF17862 AAA+ lid domain JSQ73_004120 PF01171 PP-loop family JSQ73_004125 PF00691 OmpA family JSQ73_004150 PF00719 Inorganic pyrophosphatase JSQ73_004170 PF02401 LytB protein JSQ73_004195 PF00436 Single-strand binding protein family JSQ73_004200 PF00701 Dihydrodipicolinate synthetase family JSQ73_004210 PF08240 Alcohol dehydrogenase GroES-like domain JSQ73_004210 PF00107 Zinc-binding dehydrogenase JSQ73_004220 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JSQ73_004225 PF01027 Inhibitor of apoptosis-promoting Bax1 JSQ73_004230 PF00266 Aminotransferase class-V JSQ73_004235 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JSQ73_004240 PF00005 ABC transporter JSQ73_004245 PF01521 Iron-sulphur cluster biosynthesis JSQ73_004250 PF01966 HD domain JSQ73_004250 PF13286 Phosphohydrolase-associated domain JSQ73_004255 PF01872 RibD C-terminal domain JSQ73_004255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JSQ73_004280 PF02632 BioY family JSQ73_004300 PF00521 DNA gyrase/topoisomerase IV, subunit A JSQ73_004300 PF03989 DNA gyrase C-terminal domain, beta-propeller JSQ73_004305 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JSQ73_004305 PF00355 Rieske [2Fe-2S] domain JSQ73_004315 PF01523 Putative modulator of DNA gyrase JSQ73_004340 PF08245 Mur ligase middle domain JSQ73_004340 PF02875 Mur ligase family, glutamate ligase domain JSQ73_004355 PF03364 Polyketide cyclase / dehydrase and lipid transport JSQ73_004360 PF13462 Thioredoxin JSQ73_004390 PF12169 DNA polymerase III subunits gamma and tau domain III JSQ73_004395 PF02575 YbaB/EbfC DNA-binding family JSQ73_004405 PF00140 Sigma-70 factor, region 1.2 JSQ73_004405 PF04542 Sigma-70 region 2 JSQ73_004405 PF04545 Sigma-70, region 4 JSQ73_004415 PF00712 DNA polymerase III beta subunit, N-terminal domain JSQ73_004415 PF02767 DNA polymerase III beta subunit, central domain JSQ73_004415 PF02768 DNA polymerase III beta subunit, C-terminal domain JSQ73_004420 PF01416 tRNA pseudouridine synthase JSQ73_004425 PF00154 recA bacterial DNA recombination protein JSQ73_004430 PF01195 Peptidyl-tRNA hydrolase JSQ73_004435 PF14693 Ribosomal protein TL5, C-terminal domain JSQ73_004435 PF01386 Ribosomal L25p family JSQ73_004445 PF01795 MraW methylase family JSQ73_004450 PF00083 Sugar (and other) transporter JSQ73_004455 PF00557 Metallopeptidase family M24 JSQ73_004460 PF02491 SHS2 domain inserted in FTSA JSQ73_004465 PF01327 Polypeptide deformylase JSQ73_004470 PF03167 Uracil DNA glycosylase superfamily JSQ73_004475 PF03232 Ubiquinone biosynthesis protein COQ7 JSQ73_004485 PF13537 Glutamine amidotransferase domain JSQ73_004485 PF00156 Phosphoribosyl transferase domain JSQ73_004495 PF03631 Virulence factor BrkB JSQ73_004505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ73_004505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JSQ73_004505 PF02142 MGS-like domain JSQ73_004510 PF01219 Prokaryotic diacylglycerol kinase JSQ73_004515 PF00849 RNA pseudouridylate synthase JSQ73_004525 PF03772 Competence protein JSQ73_004525 PF00753 Metallo-beta-lactamase superfamily JSQ73_004545 PF02223 Thymidylate kinase JSQ73_004555 PF00999 Sodium/hydrogen exchanger family JSQ73_004555 PF02254 TrkA-N domain JSQ73_004560 PF00696 Amino acid kinase family JSQ73_004560 PF01842 ACT domain JSQ73_004560 PF13840 ACT domain JSQ73_004565 PF02463 RecF/RecN/SMC N terminal domain JSQ73_004570 PF00578 AhpC/TSA family JSQ73_004575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JSQ73_004575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JSQ73_004580 PF03033 Glycosyltransferase family 28 N-terminal domain JSQ73_004580 PF04101 Glycosyltransferase family 28 C-terminal domain JSQ73_004590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ73_004590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_004610 PF01926 50S ribosome-binding GTPase JSQ73_004610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JSQ73_004620 PF01039 Carboxyl transferase domain JSQ73_004645 PF04055 Radical SAM superfamily JSQ73_004645 PF13186 Iron-sulfur cluster-binding domain JSQ73_004660 PF06827 Zinc finger found in FPG and IleRS JSQ73_004660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JSQ73_004660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ73_004665 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JSQ73_004665 PF01243 Pyridoxamine 5'-phosphate oxidase JSQ73_004675 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_004680 PF01245 Ribosomal protein L19 JSQ73_004685 PF01746 tRNA (Guanine-1)-methyltransferase JSQ73_004690 PF01259 SAICAR synthetase JSQ73_004695 PF02769 AIR synthase related protein, C-terminal domain JSQ73_004695 PF00586 AIR synthase related protein, N-terminal domain JSQ73_004720 PF01351 Ribonuclease HII JSQ73_004725 PF00953 Glycosyl transferase family 4 JSQ73_004735 PF02245 Methylpurine-DNA glycosylase (MPG) JSQ73_004740 PF10609 NUBPL iron-transfer P-loop NTPase JSQ73_004760 PF00579 tRNA synthetases class I (W and Y) JSQ73_004775 PF00293 NUDIX domain JSQ73_004780 PF01026 TatD related DNase JSQ73_004785 PF00056 lactate/malate dehydrogenase, NAD binding domain JSQ73_004785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JSQ73_004790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JSQ73_004795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JSQ73_004800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JSQ73_004805 PF01230 HIT domain JSQ73_004820 PF08245 Mur ligase middle domain JSQ73_004820 PF01225 Mur ligase family, catalytic domain JSQ73_004820 PF02875 Mur ligase family, glutamate ligase domain JSQ73_004825 PF01370 NAD dependent epimerase/dehydratase family JSQ73_004825 PF08338 Domain of unknown function (DUF1731) JSQ73_004835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JSQ73_004835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JSQ73_004840 PF02504 Fatty acid synthesis protein JSQ73_004845 PF01783 Ribosomal L32p protein family JSQ73_004850 PF02405 Permease MlaE JSQ73_004855 PF00005 ABC transporter JSQ73_004855 PF08402 TOBE domain JSQ73_004860 PF02978 Signal peptide binding domain JSQ73_004860 PF02881 SRP54-type protein, helical bundle domain JSQ73_004860 PF00448 SRP54-type protein, GTPase domain JSQ73_004875 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_004880 PF07977 FabA-like domain JSQ73_004890 PF01103 Surface antigen JSQ73_004890 PF07244 Surface antigen variable number repeat JSQ73_004895 PF17820 PDZ domain JSQ73_004895 PF02163 Peptidase family M50 JSQ73_004915 PF00216 Bacterial DNA-binding protein JSQ73_004920 PF00575 S1 RNA binding domain JSQ73_004925 PF02390 Putative methyltransferase JSQ73_004980 PF01541 GIY-YIG catalytic domain JSQ73_004995 PF00285 Citrate synthase, C-terminal domain JSQ73_005000 PF01649 Ribosomal protein S20 JSQ73_005010 PF02899 Phage integrase, N-terminal SAM-like domain JSQ73_005010 PF00589 Phage integrase family JSQ73_005020 PF01594 AI-2E family transporter JSQ73_005030 PF12146 Serine aminopeptidase, S33 JSQ73_005040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JSQ73_005040 PF02542 YgbB family JSQ73_005045 PF02195 ParB-like nuclease domain JSQ73_005045 PF17762 HTH domain found in ParB protein JSQ73_005050 PF13614 AAA domain JSQ73_005055 PF00072 Response regulator receiver domain JSQ73_005055 PF13188 PAS domain JSQ73_005055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_005055 PF00512 His Kinase A (phospho-acceptor) domain JSQ73_005055 PF08448 PAS fold JSQ73_005060 PF01218 Coproporphyrinogen III oxidase JSQ73_005085 PF04452 RNA methyltransferase JSQ73_005100 PF08442 ATP-grasp domain JSQ73_005100 PF00549 CoA-ligase JSQ73_005105 PF02629 CoA binding domain JSQ73_005105 PF00549 CoA-ligase JSQ73_005110 PF01678 Diaminopimelate epimerase JSQ73_005145 PF13180 PDZ domain JSQ73_005150 PF01145 SPFH domain / Band 7 family JSQ73_005155 PF01145 SPFH domain / Band 7 family JSQ73_005160 PF01119 DNA mismatch repair protein, C-terminal domain JSQ73_005160 PF08676 MutL C terminal dimerisation domain JSQ73_005165 PF00731 AIR carboxylase JSQ73_005175 PF01192 RNA polymerase Rpb6 JSQ73_005185 PF03334 Na+/H+ antiporter subunit JSQ73_005190 PF13244 Domain of unknown function (DUF4040) JSQ73_005190 PF00361 Proton-conducting membrane transporter JSQ73_005190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JSQ73_005200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JSQ73_005205 PF03979 Sigma-70 factor, region 1.1 JSQ73_005205 PF04546 Sigma-70, non-essential region JSQ73_005205 PF00140 Sigma-70 factor, region 1.2 JSQ73_005205 PF04545 Sigma-70, region 4 JSQ73_005205 PF04539 Sigma-70 region 3 JSQ73_005205 PF04542 Sigma-70 region 2 JSQ73_005235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JSQ73_005240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JSQ73_005250 PF01050 Mannose-6-phosphate isomerase JSQ73_005250 PF00483 Nucleotidyl transferase JSQ73_005255 PF01050 Mannose-6-phosphate isomerase JSQ73_005255 PF00483 Nucleotidyl transferase JSQ73_005260 PF02687 FtsX-like permease family JSQ73_005260 PF12704 MacB-like periplasmic core domain JSQ73_005290 PF01791 DeoC/LacD family aldolase JSQ73_005300 PF01180 Dihydroorotate dehydrogenase JSQ73_005305 PF00035 Double-stranded RNA binding motif JSQ73_005305 PF14622 Ribonuclease-III-like JSQ73_005310 PF02630 SCO1/SenC JSQ73_005315 PF00929 Exonuclease JSQ73_005325 PF02556 Preprotein translocase subunit SecB JSQ73_005330 PF00330 Aconitase family (aconitate hydratase) JSQ73_005330 PF00694 Aconitase C-terminal domain JSQ73_005335 PF14850 DNA-binding domain of Proline dehydrogenase JSQ73_005335 PF01619 Proline dehydrogenase JSQ73_005335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JSQ73_005335 PF00171 Aldehyde dehydrogenase family JSQ73_005345 PF02789 Cytosol aminopeptidase family, N-terminal domain JSQ73_005345 PF00883 Cytosol aminopeptidase family, catalytic domain JSQ73_005355 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JSQ73_005355 PF00384 Molybdopterin oxidoreductase JSQ73_005355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JSQ73_005365 PF00146 NADH dehydrogenase JSQ73_005370 PF00490 Delta-aminolevulinic acid dehydratase JSQ73_005380 PF02091 Glycyl-tRNA synthetase alpha subunit JSQ73_005385 PF05746 DALR anticodon binding domain JSQ73_005385 PF02092 Glycyl-tRNA synthetase beta subunit JSQ73_005390 PF02151 UvrB/uvrC motif JSQ73_005390 PF01541 GIY-YIG catalytic domain JSQ73_005390 PF08459 UvrC Helix-hairpin-helix N-terminal JSQ73_005400 PF00588 SpoU rRNA Methylase family JSQ73_005400 PF08032 RNA 2'-O ribose methyltransferase substrate binding JSQ73_005440 PF01545 Cation efflux family JSQ73_005480 PF17760 UvrA interaction domain JSQ73_005480 PF17755 UvrA DNA-binding domain JSQ73_005520 PF02660 Glycerol-3-phosphate acyltransferase JSQ73_005525 PF01235 Sodium:alanine symporter family JSQ73_005530 PF01235 Sodium:alanine symporter family JSQ73_005535 PF01066 CDP-alcohol phosphatidyltransferase JSQ73_005540 PF02666 Phosphatidylserine decarboxylase JSQ73_005555 PF00204 DNA gyrase B JSQ73_005555 PF00986 DNA gyrase B subunit, carboxyl terminus JSQ73_005555 PF01751 Toprim domain JSQ73_005555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_005560 PF01425 Amidase JSQ73_005565 PF01367 5'-3' exonuclease, C-terminal SAM fold JSQ73_005565 PF00476 DNA polymerase family A JSQ73_005565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JSQ73_005600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ73_005600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ73_005600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ73_005600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ73_005610 PF00677 Lumazine binding domain JSQ73_005635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JSQ73_005635 PF01409 tRNA synthetases class II core domain (F) JSQ73_005640 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_005640 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_005640 PF12804 MobA-like NTP transferase domain JSQ73_005650 PF00829 Ribosomal prokaryotic L21 protein JSQ73_005655 PF01016 Ribosomal L27 protein JSQ73_005665 PF02773 S-adenosylmethionine synthetase, C-terminal domain JSQ73_005665 PF02772 S-adenosylmethionine synthetase, central domain JSQ73_005665 PF00438 S-adenosylmethionine synthetase, N-terminal domain JSQ73_005670 PF03070 TENA/THI-4/PQQC family JSQ73_005680 PF00510 Cytochrome c oxidase subunit III JSQ73_005685 PF02075 Crossover junction endodeoxyribonuclease RuvC JSQ73_005690 PF03652 Holliday junction resolvase JSQ73_005695 PF00317 Ribonucleotide reductase, all-alpha domain JSQ73_005695 PF02867 Ribonucleotide reductase, barrel domain JSQ73_005695 PF03477 ATP cone domain JSQ73_005725 PF00825 Ribonuclease P JSQ73_005730 PF00468 Ribosomal protein L34 JSQ73_005735 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_005740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_005740 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ73_005745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JSQ73_005755 PF00923 Transaldolase/Fructose-6-phosphate aldolase JSQ73_005765 PF00106 short chain dehydrogenase JSQ73_005770 PF00117 Glutamine amidotransferase class-I JSQ73_005770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JSQ73_005795 PF00529 HlyD membrane-fusion protein of T1SS JSQ73_005795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JSQ73_005800 PF00462 Glutaredoxin JSQ73_005810 PF01515 Phosphate acetyl/butaryl transferase JSQ73_005810 PF00390 Malic enzyme, N-terminal domain JSQ73_005810 PF03949 Malic enzyme, NAD binding domain JSQ73_005815 PF01066 CDP-alcohol phosphatidyltransferase JSQ73_005830 PF01709 Transcriptional regulator JSQ73_005835 PF01476 LysM domain JSQ73_005835 PF01551 Peptidase family M23 JSQ73_005835 PF08525 Opacity-associated protein A N-terminal motif JSQ73_005865 PF07690 Major Facilitator Superfamily JSQ73_005870 PF01209 ubiE/COQ5 methyltransferase family JSQ73_005875 PF00664 ABC transporter transmembrane region JSQ73_005875 PF00005 ABC transporter JSQ73_005895 PF00750 tRNA synthetases class I (R) JSQ73_005895 PF05746 DALR anticodon binding domain JSQ73_005895 PF03485 Arginyl tRNA synthetase N terminal domain JSQ73_005900 PF00005 ABC transporter JSQ73_005920 PF14437 MafB19-like deaminase JSQ73_005930 PF06418 CTP synthase N-terminus JSQ73_005930 PF00117 Glutamine amidotransferase class-I JSQ73_005940 PF00101 Ribulose bisphosphate carboxylase, small chain JSQ73_005940 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_005965 PF01380 SIS domain JSQ73_005970 PF02699 Preprotein translocase subunit JSQ73_005980 PF00318 Ribosomal protein S2 JSQ73_005985 PF00889 Elongation factor TS JSQ73_005990 PF00696 Amino acid kinase family JSQ73_005995 PF01765 Ribosome recycling factor JSQ73_006015 PF02386 Cation transport protein JSQ73_006020 PF00692 dUTPase JSQ73_006055 PF01040 UbiA prenyltransferase family JSQ73_006060 PF02033 Ribosome-binding factor A JSQ73_006065 PF11987 Translation-initiation factor 2 JSQ73_006065 PF00009 Elongation factor Tu GTP binding domain JSQ73_006065 PF04760 Translation initiation factor IF-2, N-terminal region JSQ73_006070 PF13184 NusA-like KH domain JSQ73_006070 PF08529 NusA N-terminal domain JSQ73_006070 PF00575 S1 RNA binding domain JSQ73_006090 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_006090 PF17862 AAA+ lid domain JSQ73_006090 PF01434 Peptidase family M41 JSQ73_006130 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JSQ73_006130 PF04055 Radical SAM superfamily JSQ73_006135 PF00830 Ribosomal L28 family JSQ73_006155 PF00163 Ribosomal protein S4/S9 N-terminal domain JSQ73_006155 PF01479 S4 domain JSQ73_006160 PF00456 Transketolase, thiamine diphosphate binding domain JSQ73_006160 PF02780 Transketolase, C-terminal domain JSQ73_006160 PF02779 Transketolase, pyrimidine binding domain JSQ73_006165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JSQ73_006165 PF14572 Phosphoribosyl synthetase-associated domain JSQ73_006170 PF02686 Glu-tRNAGln amidotransferase C subunit JSQ73_006175 PF07676 WD40-like Beta Propeller Repeat JSQ73_006180 PF12706 Beta-lactamase superfamily domain JSQ73_006180 PF17770 Ribonuclease J C-terminal domain JSQ73_006180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JSQ73_006185 PF01556 DnaJ C terminal domain JSQ73_006185 PF00226 DnaJ domain JSQ73_006185 PF00684 DnaJ central domain JSQ73_006200 PF02769 AIR synthase related protein, C-terminal domain JSQ73_006200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JSQ73_006200 PF00586 AIR synthase related protein, N-terminal domain JSQ73_006205 PF12705 PD-(D/E)XK nuclease superfamily JSQ73_006225 PF00206 Lyase JSQ73_006225 PF10415 Fumarase C C-terminus JSQ73_006260 PF00210 Ferritin-like domain JSQ73_006265 PF02104 SURF1 family JSQ73_006270 PF08245 Mur ligase middle domain JSQ73_006270 PF01225 Mur ligase family, catalytic domain JSQ73_006270 PF02875 Mur ligase family, glutamate ligase domain JSQ73_006275 PF00113 Enolase, C-terminal TIM barrel domain JSQ73_006275 PF03952 Enolase, N-terminal domain JSQ73_006280 PF01018 GTP1/OBG JSQ73_006280 PF01926 50S ribosome-binding GTPase JSQ73_006300 PF02325 YGGT family JSQ73_006305 PF01580 FtsK/SpoIIIE family JSQ73_006305 PF09397 Ftsk gamma domain JSQ73_006305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JSQ73_006305 PF17854 FtsK alpha domain JSQ73_006320 PF04551 GcpE protein JSQ73_006325 PF00226 DnaJ domain JSQ73_006325 PF01556 DnaJ C terminal domain JSQ73_006325 PF00684 DnaJ central domain JSQ73_006335 PF04002 RadC-like JAB domain JSQ73_006350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JSQ73_006350 PF01578 Cytochrome C assembly protein JSQ73_006375 PF05190 MutS family domain IV JSQ73_006375 PF05192 MutS domain III JSQ73_006375 PF00488 MutS domain V JSQ73_006375 PF01624 MutS domain I JSQ73_006375 PF05188 MutS domain II JSQ73_006385 PF02938 GAD domain JSQ73_006385 PF00152 tRNA synthetases class II (D, K and N) JSQ73_006385 PF01336 OB-fold nucleic acid binding domain JSQ73_006390 PF01183 Glycosyl hydrolases family 25 JSQ73_006395 PF08946 Osmosensory transporter coiled coil JSQ73_006395 PF00083 Sugar (and other) transporter JSQ73_006400 PF00849 RNA pseudouridylate synthase JSQ73_006400 PF01479 S4 domain JSQ73_006425 PF01769 Divalent cation transporter JSQ73_006425 PF03448 MgtE intracellular N domain JSQ73_006425 PF00571 CBS domain JSQ73_006515 PF00533 BRCA1 C Terminus (BRCT) domain JSQ73_006515 PF01653 NAD-dependent DNA ligase adenylation domain JSQ73_006515 PF03120 NAD-dependent DNA ligase OB-fold domain JSQ73_006515 PF12826 Helix-hairpin-helix motif JSQ73_006565 PF00925 GTP cyclohydrolase II JSQ73_006570 PF04335 VirB8 protein JSQ73_006585 PF00437 Type II/IV secretion system protein JSQ73_006590 PF02534 Type IV secretory system Conjugative DNA transfer JSQ73_006600 PF13368 Topoisomerase C-terminal repeat JSQ73_006600 PF01131 DNA topoisomerase JSQ73_006600 PF01751 Toprim domain JSQ73_006600 PF01396 Topoisomerase DNA binding C4 zinc finger