locus-tag class description WBP_0001 PF01208 Uroporphyrinogen decarboxylase (URO-D) WBP_0002 PF00155 Aminotransferase class I and II WBP_0004 PF00464 Serine hydroxymethyltransferase WBP_0006 PF01926 50S ribosome-binding GTPase WBP_0006 PF07650 KH domain WBP_0012 PF08946 Osmosensory transporter coiled coil WBP_0012 PF00083 Sugar (and other) transporter WBP_0013 PF01336 OB-fold nucleic acid binding domain WBP_0013 PF00152 tRNA synthetases class II (D, K and N) WBP_0013 PF02938 GAD domain WBP_0015 PF00005 ABC transporter WBP_0016 PF01098 Cell cycle protein WBP_0017 PF00361 Proton-conducting membrane transporter WBP_0021 PF00575 S1 RNA binding domain WBP_0021 PF01138 3' exoribonuclease family, domain 1 WBP_0021 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WBP_0021 PF00013 KH domain WBP_0021 PF03725 3' exoribonuclease family, domain 2 WBP_0022 PF00312 Ribosomal protein S15 WBP_0023 PF01509 TruB family pseudouridylate synthase (N terminal domain) WBP_0023 PF16198 tRNA pseudouridylate synthase B C-terminal domain WBP_0023 PF01509 TruB family pseudouridylate synthase (N terminal domain) WBP_0023 PF16198 tRNA pseudouridylate synthase B C-terminal domain WBP_0025 PF00266 Aminotransferase class-V WBP_0026 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WBP_0028 PF00005 ABC transporter WBP_0029 PF01521 Iron-sulphur cluster biosynthesis WBP_0030 PF13286 Phosphohydrolase-associated domain WBP_0030 PF01966 HD domain WBP_0031 PF01872 RibD C-terminal domain WBP_0031 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WBP_0034 PF00266 Aminotransferase class-V WBP_0037 PF00639 PPIC-type PPIASE domain WBP_0037 PF09312 SurA N-terminal domain WBP_0038 PF10396 GTP-binding protein TrmE N-terminus WBP_0038 PF12631 MnmE helical domain WBP_0038 PF01926 50S ribosome-binding GTPase WBP_0040 PF00226 DnaJ domain WBP_0040 PF00684 DnaJ central domain WBP_0040 PF01556 DnaJ C terminal domain WBP_0043 PF13368 Topoisomerase C-terminal repeat WBP_0043 PF01751 Toprim domain WBP_0043 PF01131 DNA topoisomerase WBP_0043 PF01396 Topoisomerase DNA binding C4 zinc finger WBP_0045 PF00528 Binding-protein-dependent transport system inner membrane component WBP_0046 PF04379 ApaG domain WBP_0047 PF02222 ATP-grasp domain WBP_0047 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WBP_0048 PF02774 Semialdehyde dehydrogenase, dimerisation domain WBP_0048 PF01118 Semialdehyde dehydrogenase, NAD binding domain WBP_0051 PF00324 Amino acid permease WBP_0052 PF02401 LytB protein WBP_0058 PF00448 SRP54-type protein, GTPase domain WBP_0058 PF02978 Signal peptide binding domain WBP_0058 PF02881 SRP54-type protein, helical bundle domain WBP_0061 PF01795 MraW methylase family WBP_0070 PF10431 C-terminal, D2-small domain, of ClpB protein WBP_0070 PF02861 Clp amino terminal domain, pathogenicity island component WBP_0070 PF17871 AAA lid domain WBP_0070 PF00004 ATPase family associated with various cellular activities (AAA) WBP_0070 PF07724 AAA domain (Cdc48 subfamily) WBP_0071 PF01791 DeoC/LacD family aldolase WBP_0074 PF01180 Dihydroorotate dehydrogenase WBP_0075 PF00035 Double-stranded RNA binding motif WBP_0075 PF14622 Ribonuclease-III-like WBP_0079 PF04055 Radical SAM superfamily WBP_0079 PF00919 Uncharacterized protein family UPF0004 WBP_0080 PF02686 Glu-tRNAGln amidotransferase C subunit WBP_0081 PF14572 Phosphoribosyl synthetase-associated domain WBP_0081 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WBP_0083 PF01702 Queuine tRNA-ribosyltransferase WBP_0084 PF00361 Proton-conducting membrane transporter WBP_0092 PF01243 Pyridoxamine 5'-phosphate oxidase WBP_0092 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WBP_0093 PF06827 Zinc finger found in FPG and IleRS WBP_0093 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WBP_0093 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WBP_0095 PF01039 Carboxyl transferase domain WBP_0097 PF01926 50S ribosome-binding GTPase WBP_0097 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WBP_0099 PF03232 Ubiquinone biosynthesis protein COQ7 WBP_0100 PF00719 Inorganic pyrophosphatase WBP_0104 PF00625 Guanylate kinase WBP_0105 PF01258 Prokaryotic dksA/traR C4-type zinc finger WBP_0107 PF01728 FtsJ-like methyltransferase WBP_0110 PF00572 Ribosomal protein L13 WBP_0111 PF00380 Ribosomal protein S9/S16 WBP_0113 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WBP_0114 PF03799 Cell division protein FtsQ WBP_0114 PF08478 POTRA domain, FtsQ-type WBP_0115 PF01820 D-ala D-ala ligase N-terminus WBP_0115 PF07478 D-ala D-ala ligase C-terminus WBP_0118 PF11953 Domain of unknown function (DUF3470) WBP_0118 PF00037 4Fe-4S binding domain WBP_0123 PF01546 Peptidase family M20/M25/M40 WBP_0123 PF07687 Peptidase dimerisation domain WBP_0124 PF10417 C-terminal domain of 1-Cys peroxiredoxin WBP_0124 PF00578 AhpC/TSA family WBP_0125 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0128 PF02899 Phage integrase, N-terminal SAM-like domain WBP_0128 PF00589 Phage integrase family WBP_0129 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WBP_0129 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0131 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WBP_0131 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0133 PF04101 Glycosyltransferase family 28 C-terminal domain WBP_0133 PF03033 Glycosyltransferase family 28 N-terminal domain WBP_0134 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WBP_0134 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WBP_0135 PF04972 BON domain WBP_0137 PF05697 Bacterial trigger factor protein (TF) WBP_0137 PF05698 Bacterial trigger factor protein (TF) C-terminus WBP_0137 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WBP_0138 PF00574 Clp protease WBP_0139 PF10431 C-terminal, D2-small domain, of ClpB protein WBP_0139 PF07724 AAA domain (Cdc48 subfamily) WBP_0139 PF06689 ClpX C4-type zinc finger WBP_0140 PF02190 ATP-dependent protease La (LON) substrate-binding domain WBP_0140 PF05362 Lon protease (S16) C-terminal proteolytic domain WBP_0140 PF00004 ATPase family associated with various cellular activities (AAA) WBP_0142 PF01975 Survival protein SurE WBP_0143 PF01653 NAD-dependent DNA ligase adenylation domain WBP_0143 PF03120 NAD-dependent DNA ligase OB-fold domain WBP_0143 PF00533 BRCA1 C Terminus (BRCT) domain WBP_0152 PF02630 SCO1/SenC WBP_0153 PF00929 Exonuclease WBP_0155 PF02556 Preprotein translocase subunit SecB WBP_0156 PF00694 Aconitase C-terminal domain WBP_0156 PF00330 Aconitase family (aconitate hydratase) WBP_0157 PF00171 Aldehyde dehydrogenase family WBP_0157 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WBP_0157 PF01619 Proline dehydrogenase WBP_0157 PF14850 DNA-binding domain of Proline dehydrogenase WBP_0161 PF00873 AcrB/AcrD/AcrF family WBP_0165 PF00575 S1 RNA binding domain WBP_0165 PF08529 NusA N-terminal domain WBP_0165 PF13184 NusA-like KH domain WBP_0166 PF04760 Translation initiation factor IF-2, N-terminal region WBP_0166 PF11987 Translation-initiation factor 2 WBP_0166 PF00009 Elongation factor Tu GTP binding domain WBP_0167 PF02033 Ribosome-binding factor A WBP_0168 PF01040 UbiA prenyltransferase family WBP_0173 PF00579 tRNA synthetases class I (W and Y) WBP_0174 PF01025 GrpE WBP_0175 PF00348 Polyprenyl synthetase WBP_0176 PF00886 Ribosomal protein S16 WBP_0177 PF00639 PPIC-type PPIASE domain WBP_0179 PF07498 Rho termination factor, N-terminal domain WBP_0179 PF07497 Rho termination factor, RNA-binding domain WBP_0179 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBP_0180 PF00571 CBS domain WBP_0180 PF00478 IMP dehydrogenase / GMP reductase domain WBP_0188 PF00549 CoA-ligase WBP_0188 PF08442 ATP-grasp domain WBP_0189 PF02629 CoA binding domain WBP_0189 PF00549 CoA-ligase WBP_0190 PF01678 Diaminopimelate epimerase WBP_0192 PF02632 BioY family WBP_0197 PF02142 MGS-like domain WBP_0197 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WBP_0197 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WBP_0205 PF08245 Mur ligase middle domain WBP_0206 PF00111 2Fe-2S iron-sulfur cluster binding domain WBP_0209 PF10415 Fumarase C C-terminus WBP_0209 PF00206 Lyase WBP_0212 PF00206 Lyase WBP_0212 PF10397 Adenylosuccinate lyase C-terminus WBP_0213 PF03948 Ribosomal protein L9, C-terminal domain WBP_0213 PF01281 Ribosomal protein L9, N-terminal domain WBP_0214 PF01084 Ribosomal protein S18 WBP_0215 PF01250 Ribosomal protein S6 WBP_0216 PF07733 Bacterial DNA polymerase III alpha NTPase domain WBP_0216 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WBP_0216 PF14579 Helix-hairpin-helix motif WBP_0216 PF02811 PHP domain WBP_0218 PF00471 Ribosomal protein L33 WBP_0219 PF12111 Polyribonucleotide phosphorylase C terminal WBP_0219 PF10150 Ribonuclease E/G family WBP_0219 PF00575 S1 RNA binding domain WBP_0220 PF00012 Hsp70 protein WBP_0221 PF01722 BolA-like protein WBP_0222 PF01053 Cys/Met metabolism PLP-dependent enzyme WBP_0223 PF08245 Mur ligase middle domain WBP_0223 PF02875 Mur ligase family, glutamate ligase domain WBP_0224 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WBP_0225 PF01027 Inhibitor of apoptosis-promoting Bax1 WBP_0226 PF00588 SpoU rRNA Methylase family WBP_0226 PF08032 RNA 2'-O ribose methyltransferase substrate binding WBP_0230 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WBP_0231 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WBP_0233 PF00483 Nucleotidyl transferase WBP_0233 PF01050 Mannose-6-phosphate isomerase WBP_0234 PF01050 Mannose-6-phosphate isomerase WBP_0234 PF00483 Nucleotidyl transferase WBP_0236 PF02687 FtsX-like permease family WBP_0236 PF12704 MacB-like periplasmic core domain WBP_0239 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WBP_0239 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WBP_0239 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WBP_0239 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WBP_0245 PF03631 Virulence factor BrkB WBP_0250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WBP_0250 PF10531 SLBB domain WBP_0250 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WBP_0252 PF00707 Translation initiation factor IF-3, C-terminal domain WBP_0252 PF05198 Translation initiation factor IF-3, N-terminal domain WBP_0253 PF03129 Anticodon binding domain WBP_0253 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBP_0253 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WBP_0254 PF12838 4Fe-4S dicluster domain WBP_0256 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WBP_0256 PF12706 Beta-lactamase superfamily domain WBP_0256 PF17770 Ribonuclease J C-terminal domain WBP_0257 PF07676 WD40-like Beta Propeller Repeat WBP_0257 PF04052 TolB amino-terminal domain WBP_0264 PF02844 Phosphoribosylglycinamide synthetase, N domain WBP_0264 PF02843 Phosphoribosylglycinamide synthetase, C domain WBP_0264 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WBP_0265 PF02403 Seryl-tRNA synthetase N-terminal domain WBP_0265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBP_0267 PF01207 Dihydrouridine synthase (Dus) WBP_0268 PF03483 B3/4 domain WBP_0268 PF03484 tRNA synthetase B5 domain WBP_0268 PF03147 Ferredoxin-fold anticodon binding domain WBP_0268 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WBP_0268 PF01588 Putative tRNA binding domain WBP_0270 PF00119 ATP synthase A chain WBP_0271 PF00137 ATP synthase subunit C WBP_0279 PF02628 Cytochrome oxidase assembly protein WBP_0280 PF02785 Biotin carboxylase C-terminal domain WBP_0280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WBP_0280 PF00364 Biotin-requiring enzyme WBP_0280 PF00289 Biotin carboxylase, N-terminal domain WBP_0280 PF18140 Propionyl-coenzyme A carboxylase BT domain WBP_0282 PF00749 tRNA synthetases class I (E and Q), catalytic domain WBP_0286 PF00132 Bacterial transferase hexapeptide (six repeats) WBP_0286 PF14602 Hexapeptide repeat of succinyl-transferase WBP_0286 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WBP_0288 PF02910 Fumarate reductase flavoprotein C-term WBP_0288 PF00890 FAD binding domain WBP_0290 PF01979 Amidohydrolase family WBP_0291 PF17761 DUF1016 N-terminal domain WBP_0291 PF06250 YhcG PDDEXK nuclease domain WBP_0292 PF00749 tRNA synthetases class I (E and Q), catalytic domain WBP_0293 PF00117 Glutamine amidotransferase class-I WBP_0293 PF00958 GMP synthase C terminal domain WBP_0294 PF03741 Integral membrane protein TerC family WBP_0296 PF13840 ACT domain WBP_0296 PF00696 Amino acid kinase family WBP_0296 PF01842 ACT domain WBP_0300 PF03364 Polyketide cyclase / dehydrase and lipid transport WBP_0301 PF13462 Thioredoxin WBP_0303 PF01596 O-methyltransferase WBP_0306 PF12169 DNA polymerase III subunits gamma and tau domain III WBP_0307 PF02575 YbaB/EbfC DNA-binding family WBP_0308 PF13505 Outer membrane protein beta-barrel domain WBP_0309 PF04542 Sigma-70 region 2 WBP_0309 PF04545 Sigma-70, region 4 WBP_0309 PF00140 Sigma-70 factor, region 1.2 WBP_0311 PF02767 DNA polymerase III beta subunit, central domain WBP_0311 PF02768 DNA polymerase III beta subunit, C-terminal domain WBP_0311 PF00712 DNA polymerase III beta subunit, N-terminal domain WBP_0312 PF01416 tRNA pseudouridine synthase WBP_0313 PF00154 recA bacterial DNA recombination protein WBP_0314 PF02666 Phosphatidylserine decarboxylase WBP_0315 PF01066 CDP-alcohol phosphatidyltransferase WBP_0317 PF01235 Sodium:alanine symporter family WBP_0318 PF02660 Glycerol-3-phosphate acyltransferase WBP_0324 PF01899 Na+/H+ ion antiporter subunit WBP_0326 PF00551 Formyl transferase WBP_0329 PF05193 Peptidase M16 inactive domain WBP_0329 PF00675 Insulinase (Peptidase family M16) WBP_0330 PF01252 Signal peptidase (SPase) II WBP_0331 PF06574 FAD synthetase WBP_0331 PF01687 Riboflavin kinase WBP_0332 PF00462 Glutaredoxin WBP_0335 PF03129 Anticodon binding domain WBP_0335 PF13393 Histidyl-tRNA synthetase WBP_0336 PF02142 MGS-like domain WBP_0336 PF01808 AICARFT/IMPCHase bienzyme WBP_0338 PF00664 ABC transporter transmembrane region WBP_0338 PF00005 ABC transporter WBP_0339 PF02542 YgbB family WBP_0339 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WBP_0340 PF00121 Triosephosphate isomerase WBP_0341 PF02779 Transketolase, pyrimidine binding domain WBP_0341 PF16078 2-oxoglutarate dehydrogenase N-terminus WBP_0341 PF00676 Dehydrogenase E1 component WBP_0341 PF16870 2-oxoglutarate dehydrogenase C-terminal WBP_0343 PF01119 DNA mismatch repair protein, C-terminal domain WBP_0343 PF08676 MutL C terminal dimerisation domain WBP_0344 PF00731 AIR carboxylase WBP_0345 PF13416 Bacterial extracellular solute-binding protein WBP_0347 PF01513 ATP-NAD kinase WBP_0348 PF01197 Ribosomal protein L31 WBP_0349 PF00698 Acyl transferase domain WBP_0350 PF01676 Metalloenzyme superfamily WBP_0350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WBP_0357 PF00521 DNA gyrase/topoisomerase IV, subunit A WBP_0357 PF03989 DNA gyrase C-terminal domain, beta-propeller WBP_0358 PF00355 Rieske [2Fe-2S] domain WBP_0358 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WBP_0359 PF00398 Ribosomal RNA adenine dimethylase WBP_0362 PF00140 Sigma-70 factor, region 1.2 WBP_0362 PF04542 Sigma-70 region 2 WBP_0362 PF04539 Sigma-70 region 3 WBP_0362 PF04545 Sigma-70, region 4 WBP_0362 PF04546 Sigma-70, non-essential region WBP_0362 PF03979 Sigma-70 factor, region 1.1 WBP_0363 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WBP_0368 PF01192 RNA polymerase Rpb6 WBP_0370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WBP_0370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WBP_0373 PF01545 Cation efflux family WBP_0375 PF16078 2-oxoglutarate dehydrogenase N-terminus WBP_0375 PF00676 Dehydrogenase E1 component WBP_0375 PF16870 2-oxoglutarate dehydrogenase C-terminal WBP_0375 PF02779 Transketolase, pyrimidine binding domain WBP_0382 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WBP_0383 PF13091 PLD-like domain WBP_0387 PF00384 Molybdopterin oxidoreductase WBP_0387 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WBP_0387 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WBP_0388 PF00146 NADH dehydrogenase WBP_0390 PF00490 Delta-aminolevulinic acid dehydratase WBP_0392 PF08459 UvrC Helix-hairpin-helix N-terminal WBP_0392 PF01541 GIY-YIG catalytic domain WBP_0392 PF02151 UvrB/uvrC motif WBP_0393 PF05746 DALR anticodon binding domain WBP_0393 PF02092 Glycyl-tRNA synthetase beta subunit WBP_0394 PF02091 Glycyl-tRNA synthetase alpha subunit WBP_0398 PF18324 Hypothetical protein TT1725 WBP_0398 PF00180 Isocitrate/isopropylmalate dehydrogenase WBP_0400 PF10576 Iron-sulfur binding domain of endonuclease III WBP_0400 PF00730 HhH-GPD superfamily base excision DNA repair protein WBP_0400 PF00633 Helix-hairpin-helix motif WBP_0401 PF04055 Radical SAM superfamily WBP_0401 PF00919 Uncharacterized protein family UPF0004 WBP_0401 PF01938 TRAM domain WBP_0402 PF08264 Anticodon-binding domain of tRNA WBP_0402 PF00133 tRNA synthetases class I (I, L, M and V) WBP_0404 PF01411 tRNA synthetases class II (A) WBP_0404 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WBP_0406 PF07690 Major Facilitator Superfamily WBP_0407 PF00472 RF-1 domain WBP_0407 PF03462 PCRF domain WBP_0408 PF01926 50S ribosome-binding GTPase WBP_0409 PF00696 Amino acid kinase family WBP_0410 PF00692 dUTPase WBP_0417 PF00118 TCP-1/cpn60 chaperonin family WBP_0418 PF00166 Chaperonin 10 Kd subunit WBP_0419 PF01571 Aminomethyltransferase folate-binding domain WBP_0422 PF00164 Ribosomal protein S12/S23 WBP_0423 PF00177 Ribosomal protein S7p/S5e WBP_0424 PF14492 Elongation Factor G, domain II WBP_0424 PF03764 Elongation factor G, domain IV WBP_0424 PF03144 Elongation factor Tu domain 2 WBP_0424 PF00679 Elongation factor G C-terminus WBP_0424 PF00009 Elongation factor Tu GTP binding domain WBP_0425 PF00009 Elongation factor Tu GTP binding domain WBP_0425 PF03143 Elongation factor Tu C-terminal domain WBP_0425 PF03144 Elongation factor Tu domain 2 WBP_0426 PF00338 Ribosomal protein S10p/S20e WBP_0427 PF00297 Ribosomal protein L3 WBP_0428 PF00573 Ribosomal protein L4/L1 family WBP_0429 PF00276 Ribosomal protein L23 WBP_0430 PF03947 Ribosomal Proteins L2, C-terminal domain WBP_0430 PF00181 Ribosomal Proteins L2, RNA binding domain WBP_0431 PF00203 Ribosomal protein S19 WBP_0432 PF00237 Ribosomal protein L22p/L17e WBP_0433 PF07650 KH domain WBP_0433 PF00189 Ribosomal protein S3, C-terminal domain WBP_0434 PF00252 Ribosomal protein L16p/L10e WBP_0435 PF00831 Ribosomal L29 protein WBP_0436 PF00366 Ribosomal protein S17 WBP_0437 PF00238 Ribosomal protein L14p/L23e WBP_0438 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WBP_0439 PF00673 ribosomal L5P family C-terminus WBP_0439 PF00281 Ribosomal protein L5 WBP_0440 PF00253 Ribosomal protein S14p/S29e WBP_0441 PF00410 Ribosomal protein S8 WBP_0442 PF00347 Ribosomal protein L6 WBP_0443 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WBP_0444 PF00333 Ribosomal protein S5, N-terminal domain WBP_0444 PF03719 Ribosomal protein S5, C-terminal domain WBP_0445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WBP_0446 PF00344 SecY translocase WBP_0448 PF00416 Ribosomal protein S13/S18 WBP_0449 PF00411 Ribosomal protein S11 WBP_0450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WBP_0450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WBP_0450 PF01000 RNA polymerase Rpb3/RpoA insert domain WBP_0451 PF01196 Ribosomal protein L17 WBP_0452 PF02021 Uncharacterised protein family UPF0102 WBP_0453 PF00213 ATP synthase delta (OSCP) subunit WBP_0454 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBP_0454 PF00306 ATP synthase alpha/beta chain, C terminal domain WBP_0454 PF02874 ATP synthase alpha/beta family, beta-barrel domain WBP_0455 PF01272 Transcription elongation factor, GreA/GreB, C-term WBP_0455 PF03449 Transcription elongation factor, N-terminal WBP_0456 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WBP_0456 PF00925 GTP cyclohydrolase II WBP_0460 PF00529 HlyD membrane-fusion protein of T1SS WBP_0460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WBP_0461 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WBP_0461 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WBP_0462 PF00115 Cytochrome C and Quinol oxidase polypeptide I WBP_0463 PF01040 UbiA prenyltransferase family WBP_0464 PF00075 RNase H WBP_0468 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WBP_0468 PF04055 Radical SAM superfamily WBP_0469 PF00830 Ribosomal L28 family WBP_0471 PF00664 ABC transporter transmembrane region WBP_0471 PF00005 ABC transporter WBP_0474 PF05746 DALR anticodon binding domain WBP_0474 PF00750 tRNA synthetases class I (R) WBP_0474 PF03485 Arginyl tRNA synthetase N terminal domain WBP_0477 PF01479 S4 domain WBP_0477 PF00849 RNA pseudouridylate synthase WBP_0478 PF00676 Dehydrogenase E1 component WBP_0480 PF02896 PEP-utilising enzyme, TIM barrel domain WBP_0480 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WBP_0480 PF00391 PEP-utilising enzyme, mobile domain WBP_0483 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WBP_0485 PF06071 Protein of unknown function (DUF933) WBP_0485 PF01926 50S ribosome-binding GTPase WBP_0487 PF13735 tRNA nucleotidyltransferase domain 2 putative WBP_0487 PF12627 Probable RNA and SrmB- binding site of polymerase A WBP_0487 PF01743 Poly A polymerase head domain WBP_0494 PF00083 Sugar (and other) transporter WBP_0494 PF07690 Major Facilitator Superfamily WBP_0497 PF14437 MafB19-like deaminase WBP_0498 PF00117 Glutamine amidotransferase class-I WBP_0498 PF06418 CTP synthase N-terminus WBP_0500 PF13361 UvrD-like helicase C-terminal domain WBP_0500 PF00580 UvrD/REP helicase N-terminal domain WBP_0500 PF12705 PD-(D/E)XK nuclease superfamily WBP_0501 PF00288 GHMP kinases N terminal domain WBP_0501 PF08544 GHMP kinases C terminal WBP_0502 PF04430 Protein of unknown function (DUF498/DUF598) WBP_0503 PF00950 ABC 3 transport family WBP_0507 PF01113 Dihydrodipicolinate reductase, N-terminus WBP_0507 PF05173 Dihydrodipicolinate reductase, C-terminus WBP_0508 PF00005 ABC transporter WBP_0509 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WBP_0509 PF13288 DXP reductoisomerase C-terminal domain WBP_0509 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WBP_0511 PF17871 AAA lid domain WBP_0511 PF02861 Clp amino terminal domain, pathogenicity island component WBP_0511 PF10431 C-terminal, D2-small domain, of ClpB protein WBP_0511 PF00004 ATPase family associated with various cellular activities (AAA) WBP_0511 PF07724 AAA domain (Cdc48 subfamily) WBP_0512 PF05088 Bacterial NAD-glutamate dehydrogenase WBP_0514 PF00072 Response regulator receiver domain WBP_0514 PF00990 Diguanylate cyclase, GGDEF domain WBP_0516 PF00902 Sec-independent protein translocase protein (TatC) WBP_0517 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WBP_0517 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WBP_0519 PF00772 DnaB-like helicase N terminal domain WBP_0519 PF03796 DnaB-like helicase C terminal domain WBP_0521 PF06271 RDD family WBP_0523 PF01209 ubiE/COQ5 methyltransferase family WBP_0525 PF07690 Major Facilitator Superfamily WBP_0528 PF01235 Sodium:alanine symporter family WBP_0530 PF08264 Anticodon-binding domain of tRNA WBP_0530 PF09334 tRNA synthetases class I (M) WBP_0531 PF08241 Methyltransferase domain WBP_0532 PF08275 DNA primase catalytic core, N-terminal domain WBP_0532 PF01807 CHC2 zinc finger WBP_0532 PF13662 Toprim domain WBP_0534 PF02545 Maf-like protein WBP_0535 PF01176 Translation initiation factor 1A / IF-1 WBP_0536 PF01029 NusB family WBP_0537 PF00885 6,7-dimethyl-8-ribityllumazine synthase WBP_0538 PF02096 60Kd inner membrane protein WBP_0538 PF14849 YidC periplasmic domain WBP_0540 PF02355 Protein export membrane protein WBP_0540 PF07549 SecD/SecF GG Motif WBP_0543 PF03462 PCRF domain WBP_0543 PF00472 RF-1 domain WBP_0544 PF00571 CBS domain WBP_0544 PF03448 MgtE intracellular N domain WBP_0544 PF01769 Divalent cation transporter WBP_0547 PF00692 dUTPase WBP_0549 PF00768 D-alanyl-D-alanine carboxypeptidase WBP_0549 PF07943 Penicillin-binding protein 5, C-terminal domain WBP_0551 PF11967 Recombination protein O N terminal WBP_0551 PF02565 Recombination protein O C terminal WBP_0553 PF01578 Cytochrome C assembly protein WBP_0553 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WBP_0555 PF17827 PrmC N-terminal domain WBP_0555 PF05175 Methyltransferase small domain WBP_0555 PF02390 Putative methyltransferase WBP_0557 PF02534 Type IV secretory system Conjugative DNA transfer WBP_0558 PF00437 Type II/IV secretion system protein WBP_0561 PF04335 VirB8 protein WBP_0562 PF00925 GTP cyclohydrolase II WBP_0565 PF00308 Bacterial dnaA protein WBP_0565 PF08299 Bacterial dnaA protein helix-turn-helix WBP_0565 PF11638 DnaA N-terminal domain WBP_0566 PF00120 Glutamine synthetase, catalytic domain WBP_0571 PF00709 Adenylosuccinate synthetase WBP_0572 PF12705 PD-(D/E)XK nuclease superfamily WBP_0573 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WBP_0573 PF00586 AIR synthase related protein, N-terminal domain WBP_0573 PF02769 AIR synthase related protein, C-terminal domain WBP_0577 PF00268 Ribonucleotide reductase, small chain WBP_0579 PF02810 SEC-C motif WBP_0579 PF07516 SecA Wing and Scaffold domain WBP_0579 PF07517 SecA DEAD-like domain WBP_0579 PF01043 SecA preprotein cross-linking domain WBP_0584 PF17760 UvrA interaction domain WBP_0584 PF17755 UvrA DNA-binding domain WBP_0587 PF01121 Dephospho-CoA kinase WBP_0588 PF00570 HRDC domain WBP_0588 PF01612 3'-5' exonuclease WBP_0589 PF05188 MutS domain II WBP_0589 PF05190 MutS family domain IV WBP_0589 PF01624 MutS domain I WBP_0589 PF00488 MutS domain V WBP_0589 PF05192 MutS domain III WBP_0592 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0593 PF00156 Phosphoribosyl transferase domain WBP_0593 PF13537 Glutamine amidotransferase domain WBP_0594 PF02245 Methylpurine-DNA glycosylase (MPG) WBP_0596 PF05491 RuvB C-terminal winged helix domain WBP_0596 PF05496 Holliday junction DNA helicase RuvB P-loop domain WBP_0596 PF17864 RuvB AAA lid domain WBP_0597 PF07499 RuvA, C-terminal domain WBP_0597 PF01330 RuvA N terminal domain WBP_0603 PF00579 tRNA synthetases class I (W and Y) WBP_0605 PF00293 NUDIX domain WBP_0606 PF01026 TatD related DNase WBP_0607 PF00056 lactate/malate dehydrogenase, NAD binding domain WBP_0607 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WBP_0608 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WBP_0609 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WBP_0610 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WBP_0611 PF01230 HIT domain WBP_0613 PF08245 Mur ligase middle domain WBP_0613 PF02875 Mur ligase family, glutamate ligase domain WBP_0613 PF01225 Mur ligase family, catalytic domain WBP_0614 PF04321 RmlD substrate binding domain WBP_0616 PF00834 Ribulose-phosphate 3 epimerase family WBP_0617 PF03099 Biotin/lipoate A/B protein ligase family WBP_0621 PF00528 Binding-protein-dependent transport system inner membrane component WBP_0623 PF01245 Ribosomal protein L19 WBP_0624 PF01746 tRNA (Guanine-1)-methyltransferase WBP_0625 PF01259 SAICAR synthetase WBP_0626 PF00586 AIR synthase related protein, N-terminal domain WBP_0626 PF02769 AIR synthase related protein, C-terminal domain WBP_0629 PF01380 SIS domain WBP_0630 PF01380 SIS domain WBP_0631 PF02699 Preprotein translocase subunit WBP_0633 PF00675 Insulinase (Peptidase family M16) WBP_0633 PF05193 Peptidase M16 inactive domain WBP_0634 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WBP_0634 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WBP_0639 PF00814 Glycoprotease family WBP_0640 PF00005 ABC transporter WBP_0640 PF00664 ABC transporter transmembrane region WBP_0647 PF00436 Single-strand binding protein family WBP_0648 PF00701 Dihydrodipicolinate synthetase family WBP_0653 PF00691 OmpA family WBP_0654 PF01171 PP-loop family WBP_0655 PF00004 ATPase family associated with various cellular activities (AAA) WBP_0655 PF06480 FtsH Extracellular WBP_0655 PF17862 AAA+ lid domain WBP_0655 PF01434 Peptidase family M41 WBP_0657 PF02223 Thymidylate kinase WBP_0659 PF02254 TrkA-N domain WBP_0659 PF00999 Sodium/hydrogen exchanger family WBP_0661 PF00210 Ferritin-like domain WBP_0665 PF00183 Hsp90 protein WBP_0675 PF00155 Aminotransferase class I and II WBP_0677 PF09285 Elongation factor P, C-terminal WBP_0677 PF08207 Elongation factor P (EF-P) KOW-like domain WBP_0677 PF01132 Elongation factor P (EF-P) OB domain WBP_0678 PF01782 RimM N-terminal domain WBP_0678 PF05239 PRC-barrel domain WBP_0679 PF00202 Aminotransferase class-III WBP_0680 PF13188 PAS domain WBP_0680 PF13426 PAS domain WBP_0680 PF00512 His Kinase A (phospho-acceptor) domain WBP_0680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBP_0680 PF00989 PAS fold WBP_0681 PF00578 AhpC/TSA family WBP_0682 PF02463 RecF/RecN/SMC N terminal domain WBP_0686 PF00072 Response regulator receiver domain WBP_0686 PF00486 Transcriptional regulatory protein, C terminal WBP_0687 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WBP_0687 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WBP_0688 PF04608 Phosphatidylglycerophosphatase A WBP_0691 PF13085 2Fe-2S iron-sulfur cluster binding domain WBP_0692 PF02130 Uncharacterized protein family UPF0054 WBP_0694 PF12327 FtsZ family, C-terminal domain WBP_0694 PF00091 Tubulin/FtsZ family, GTPase domain WBP_0696 PF13335 Magnesium chelatase, subunit ChlI C-terminal WBP_0696 PF01078 Magnesium chelatase, subunit ChlI WBP_0701 PF08264 Anticodon-binding domain of tRNA WBP_0701 PF09334 tRNA synthetases class I (M) WBP_0701 PF13603 Leucyl-tRNA synthetase, Domain 2 WBP_0701 PF00133 tRNA synthetases class I (I, L, M and V) WBP_0702 PF01551 Peptidase family M23 WBP_0707 PF00085 Thioredoxin WBP_0711 PF13932 GidA associated domain WBP_0711 PF01134 Glucose inhibited division protein A WBP_0712 PF00557 Metallopeptidase family M24 WBP_0712 PF01321 Creatinase/Prolidase N-terminal domain WBP_0714 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WBP_0714 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WBP_0715 PF02504 Fatty acid synthesis protein WBP_0716 PF01783 Ribosomal L32p protein family WBP_0717 PF02405 Permease MlaE WBP_0718 PF00571 CBS domain WBP_0718 PF00005 ABC transporter WBP_0719 PF03100 CcmE WBP_0721 PF02237 Biotin protein ligase C terminal domain WBP_0721 PF03099 Biotin/lipoate A/B protein ligase family WBP_0721 PF08279 HTH domain WBP_0722 PF00361 Proton-conducting membrane transporter WBP_0723 PF00361 Proton-conducting membrane transporter WBP_0724 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WBP_0724 PF00361 Proton-conducting membrane transporter WBP_0725 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WBP_0726 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WBP_0729 PF13361 UvrD-like helicase C-terminal domain WBP_0729 PF00580 UvrD/REP helicase N-terminal domain WBP_0730 PF00107 Zinc-binding dehydrogenase WBP_0730 PF08240 Alcohol dehydrogenase GroES-like domain WBP_0734 PF00883 Cytosol aminopeptidase family, catalytic domain WBP_0734 PF02789 Cytosol aminopeptidase family, N-terminal domain WBP_0735 PF00775 Dioxygenase WBP_0736 PF03618 Kinase/pyrophosphorylase WBP_0737 PF01578 Cytochrome C assembly protein WBP_0738 PF00271 Helicase conserved C-terminal domain WBP_0738 PF17191 RecG wedge domain WBP_0738 PF00270 DEAD/DEAH box helicase WBP_0742 PF01300 Telomere recombination WBP_0743 PF12169 DNA polymerase III subunits gamma and tau domain III WBP_0746 PF01351 Ribonuclease HII WBP_0747 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WBP_0747 PF00953 Glycosyl transferase family 4 WBP_0748 PF17854 FtsK alpha domain WBP_0748 PF01580 FtsK/SpoIIIE family WBP_0748 PF09397 Ftsk gamma domain WBP_0748 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WBP_0750 PF00562 RNA polymerase Rpb2, domain 6 WBP_0750 PF04983 RNA polymerase Rpb1, domain 3 WBP_0750 PF04565 RNA polymerase Rpb2, domain 3 WBP_0750 PF04561 RNA polymerase Rpb2, domain 2 WBP_0750 PF04998 RNA polymerase Rpb1, domain 5 WBP_0750 PF04560 RNA polymerase Rpb2, domain 7 WBP_0750 PF00623 RNA polymerase Rpb1, domain 2 WBP_0750 PF04563 RNA polymerase beta subunit WBP_0750 PF05000 RNA polymerase Rpb1, domain 4 WBP_0750 PF04997 RNA polymerase Rpb1, domain 1 WBP_0750 PF10385 RNA polymerase beta subunit external 1 domain WBP_0751 PF16320 Ribosomal protein L7/L12 dimerisation domain WBP_0751 PF00542 Ribosomal protein L7/L12 C-terminal domain WBP_0752 PF00466 Ribosomal protein L10 WBP_0753 PF00687 Ribosomal protein L1p/L10e family WBP_0754 PF00298 Ribosomal protein L11, RNA binding domain WBP_0754 PF03946 Ribosomal protein L11, N-terminal domain WBP_0755 PF02357 Transcription termination factor nusG WBP_0755 PF00467 KOW motif WBP_0757 PF00009 Elongation factor Tu GTP binding domain WBP_0757 PF03144 Elongation factor Tu domain 2 WBP_0757 PF03143 Elongation factor Tu C-terminal domain WBP_0760 PF00117 Glutamine amidotransferase class-I WBP_0760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WBP_0762 PF00551 Formyl transferase WBP_0762 PF02911 Formyl transferase, C-terminal domain WBP_0763 PF00453 Ribosomal protein L20 WBP_0764 PF01632 Ribosomal protein L35 WBP_0766 PF13411 MerR HTH family regulatory protein WBP_0767 PF00216 Bacterial DNA-binding protein WBP_0770 PF04384 Iron-sulphur cluster assembly WBP_0773 PF01479 S4 domain WBP_0773 PF00163 Ribosomal protein S4/S9 N-terminal domain WBP_0774 PF02779 Transketolase, pyrimidine binding domain WBP_0774 PF02780 Transketolase, C-terminal domain WBP_0774 PF00456 Transketolase, thiamine diphosphate binding domain WBP_0777 PF02780 Transketolase, C-terminal domain WBP_0777 PF02779 Transketolase, pyrimidine binding domain WBP_0777 PF00364 Biotin-requiring enzyme WBP_0779 PF00009 Elongation factor Tu GTP binding domain WBP_0779 PF14492 Elongation Factor G, domain II WBP_0779 PF00679 Elongation factor G C-terminus WBP_0779 PF03144 Elongation factor Tu domain 2 WBP_0779 PF06421 GTP-binding protein LepA C-terminus WBP_0785 PF01709 Transcriptional regulator WBP_0788 PF01066 CDP-alcohol phosphatidyltransferase WBP_0789 PF03949 Malic enzyme, NAD binding domain WBP_0789 PF00390 Malic enzyme, N-terminal domain WBP_0789 PF01515 Phosphate acetyl/butaryl transferase WBP_0791 PF00462 Glutaredoxin WBP_0795 PF08402 TOBE domain WBP_0795 PF00005 ABC transporter WBP_0796 PF02416 mttA/Hcf106 family WBP_0797 PF06055 Exopolysaccharide synthesis, ExoD WBP_0798 PF01406 tRNA synthetases class I (C) catalytic domain WBP_0798 PF09190 DALR domain WBP_0802 PF00162 Phosphoglycerate kinase WBP_0803 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0804 PF00923 Transaldolase/Fructose-6-phosphate aldolase WBP_0806 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WBP_0807 PF02874 ATP synthase alpha/beta family, beta-barrel domain WBP_0807 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBP_0808 PF00528 Binding-protein-dependent transport system inner membrane component WBP_0809 PF00825 Ribonuclease P WBP_0815 PF00317 Ribonucleotide reductase, all-alpha domain WBP_0815 PF03477 ATP cone domain WBP_0815 PF02867 Ribonucleotide reductase, barrel domain WBP_0816 PF03652 Holliday junction resolvase WBP_0817 PF02075 Crossover junction endodeoxyribonuclease RuvC WBP_0818 PF00510 Cytochrome c oxidase subunit III WBP_0821 PF00438 S-adenosylmethionine synthetase, N-terminal domain WBP_0821 PF02773 S-adenosylmethionine synthetase, C-terminal domain WBP_0821 PF02772 S-adenosylmethionine synthetase, central domain WBP_0823 PF01016 Ribosomal L27 protein WBP_0824 PF00829 Ribosomal prokaryotic L21 protein WBP_0831 PF02637 GatB domain WBP_0831 PF02934 GatB/GatE catalytic domain WBP_0832 PF00231 ATP synthase WBP_0833 PF01523 Putative modulator of DNA gyrase WBP_0834 PF00313 'Cold-shock' DNA-binding domain WBP_0835 PF00271 Helicase conserved C-terminal domain WBP_0835 PF00270 DEAD/DEAH box helicase WBP_0839 PF01218 Coproporphyrinogen III oxidase WBP_0840 PF08448 PAS fold WBP_0840 PF13188 PAS domain WBP_0840 PF00072 Response regulator receiver domain WBP_0840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBP_0840 PF00512 His Kinase A (phospho-acceptor) domain WBP_0841 PF13614 AAA domain WBP_0842 PF17762 HTH domain found in ParB protein WBP_0842 PF02195 ParB-like nuclease domain WBP_0845 PF02646 RmuC family WBP_0850 PF03109 ABC1 family WBP_0851 PF00005 ABC transporter WBP_0853 PF00334 Nucleoside diphosphate kinase WBP_0855 PF00762 Ferrochelatase WBP_0858 PF00227 Proteasome subunit WBP_0859 PF07724 AAA domain (Cdc48 subfamily) WBP_0859 PF00004 ATPase family associated with various cellular activities (AAA) WBP_0859 PF10431 C-terminal, D2-small domain, of ClpB protein WBP_0861 PF01367 5'-3' exonuclease, C-terminal SAM fold WBP_0861 PF00476 DNA polymerase family A WBP_0861 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WBP_0863 PF01523 Putative modulator of DNA gyrase WBP_0870 PF03372 Endonuclease/Exonuclease/phosphatase family WBP_0871 PF01594 AI-2E family transporter WBP_0872 PF00308 Bacterial dnaA protein WBP_0874 PF00589 Phage integrase family WBP_0874 PF02899 Phage integrase, N-terminal SAM-like domain WBP_0876 PF01649 Ribosomal protein S20 WBP_0877 PF00285 Citrate synthase, C-terminal domain WBP_0879 PF00348 Polyprenyl synthetase WBP_0880 PF00550 Phosphopantetheine attachment site WBP_0881 PF00109 Beta-ketoacyl synthase, N-terminal domain WBP_0881 PF02801 Beta-ketoacyl synthase, C-terminal domain WBP_0882 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WBP_0883 PF02511 Thymidylate synthase complementing protein WBP_0888 PF18074 Primosomal protein N C-terminal domain WBP_0888 PF17764 3′ DNA-binding domain (3′BD) WBP_0888 PF00271 Helicase conserved C-terminal domain WBP_0888 PF00270 DEAD/DEAH box helicase WBP_0888 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WBP_0889 PF13662 Toprim domain WBP_0889 PF02132 RecR protein WBP_0893 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WBP_0893 PF00364 Biotin-requiring enzyme WBP_0893 PF02817 e3 binding domain WBP_0896 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WBP_0899 PF03060 Nitronate monooxygenase WBP_0903 PF00448 SRP54-type protein, GTPase domain WBP_0903 PF02881 SRP54-type protein, helical bundle domain WBP_0904 PF01592 NifU-like N terminal domain WBP_0905 PF01521 Iron-sulphur cluster biosynthesis WBP_0906 PF00226 DnaJ domain WBP_0906 PF07743 HSCB C-terminal oligomerisation domain WBP_0907 PF00012 Hsp70 protein WBP_0908 PF10502 Signal peptidase, peptidase S26 WBP_0910 PF01425 Amidase WBP_0911 PF00204 DNA gyrase B WBP_0911 PF00986 DNA gyrase B subunit, carboxyl terminus WBP_0911 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBP_0911 PF01751 Toprim domain WBP_0914 PF00575 S1 RNA binding domain WBP_0915 PF00216 Bacterial DNA-binding protein WBP_0918 PF02163 Peptidase family M50 WBP_0918 PF17820 PDZ domain WBP_0919 PF07244 Surface antigen variable number repeat WBP_0919 PF01103 Surface antigen WBP_0921 PF07977 FabA-like domain WBP_0922 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBP_0924 PF00364 Biotin-requiring enzyme WBP_0924 PF02817 e3 binding domain WBP_0924 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WBP_0925 PF00596 Class II Aldolase and Adducin N-terminal domain WBP_0926 PF00596 Class II Aldolase and Adducin N-terminal domain WBP_0928 PF00814 Glycoprotease family WBP_0930 PF00557 Metallopeptidase family M24 WBP_0931 PF00557 Metallopeptidase family M24 WBP_0932 PF02491 SHS2 domain inserted in FTSA WBP_0933 PF01327 Polypeptide deformylase WBP_0934 PF03167 Uracil DNA glycosylase superfamily WBP_0935 PF03330 Lytic transglycolase WBP_0936 PF01225 Mur ligase family, catalytic domain WBP_0936 PF08245 Mur ligase middle domain WBP_0936 PF02875 Mur ligase family, glutamate ligase domain WBP_0937 PF00113 Enolase, C-terminal TIM barrel domain WBP_0937 PF03952 Enolase, N-terminal domain WBP_0938 PF01018 GTP1/OBG WBP_0938 PF01926 50S ribosome-binding GTPase WBP_0940 PF03023 Lipid II flippase MurJ WBP_0944 PF00034 Cytochrome c WBP_0947 PF02272 DHHA1 domain WBP_0947 PF17768 RecJ OB domain WBP_0947 PF01368 DHH family WBP_0948 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WBP_0954 PF01195 Peptidyl-tRNA hydrolase WBP_0955 PF01386 Ribosomal L25p family WBP_0955 PF14693 Ribosomal protein TL5, C-terminal domain WBP_0961 PF14602 Hexapeptide repeat of succinyl-transferase WBP_0961 PF12804 MobA-like NTP transferase domain WBP_0961 PF00132 Bacterial transferase hexapeptide (six repeats) WBP_0962 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WBP_0962 PF01409 tRNA synthetases class II core domain (F) WBP_0965 PF00677 Lumazine binding domain WBP_0970 PF01668 SmpB protein WBP_0971 PF01790 Prolipoprotein diacylglyceryl transferase WBP_0972 PF01648 4'-phosphopantetheinyl transferase superfamily WBP_0973 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBP_0973 PF03129 Anticodon binding domain WBP_0976 PF01522 Polysaccharide deacetylase WBP_0976 PF03422 Carbohydrate binding module (family 6) WBP_0976 PF00457 Glycosyl hydrolases family 11 WBP_0977 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WBP_0977 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WBP_0978 PF02441 Flavoprotein WBP_0979 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) WBP_0980 PF01595 Cyclin M transmembrane N-terminal domain WBP_0980 PF03471 Transporter associated domain WBP_0980 PF00571 CBS domain WBP_0981 PF00202 Aminotransferase class-III WBP_0982 PF00202 Aminotransferase class-III WBP_0983 PF00202 Aminotransferase class-III WBP_0990 PF02926 THUMP domain WBP_0990 PF01170 Putative RNA methylase family UPF0020 WBP_0990 PF10672 S-adenosylmethionine-dependent methyltransferase WBP_0992 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBP_0993 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBP_0994 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBP_0995 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBP_0996 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WBP_0998 PF01921 tRNA synthetases class I (K) WBP_1004 PF01145 SPFH domain / Band 7 family WBP_1005 PF01145 SPFH domain / Band 7 family WBP_1006 PF13180 PDZ domain WBP_1010 PF12344 Ultra-violet resistance protein B WBP_1010 PF00271 Helicase conserved C-terminal domain WBP_1010 PF04851 Type III restriction enzyme, res subunit WBP_1010 PF02151 UvrB/uvrC motif WBP_1010 PF17757 UvrB interaction domain WBP_1011 PF00033 Cytochrome b/b6/petB WBP_1011 PF02167 Cytochrome C1 family WBP_1011 PF00032 Cytochrome b(C-terminal)/b6/petD WBP_1012 PF00033 Cytochrome b/b6/petB WBP_1012 PF00032 Cytochrome b(C-terminal)/b6/petD WBP_1018 PF03900 Porphobilinogen deaminase, C-terminal domain WBP_1018 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WBP_1019 PF01565 FAD binding domain WBP_1019 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WBP_1025 PF04551 GcpE protein WBP_1030 PF00226 DnaJ domain WBP_1030 PF01556 DnaJ C terminal domain WBP_1030 PF00684 DnaJ central domain WBP_1031 PF08264 Anticodon-binding domain of tRNA WBP_1031 PF00133 tRNA synthetases class I (I, L, M and V) WBP_1033 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WBP_1035 PF02355 Protein export membrane protein WBP_1039 PF00375 Sodium:dicarboxylate symporter family WBP_1040 PF00156 Phosphoribosyl transferase domain WBP_1042 PF01494 FAD binding domain WBP_1043 PF10609 NUBPL iron-transfer P-loop NTPase WBP_1048 PF01467 Cytidylyltransferase-like WBP_1051 PF01255 Putative undecaprenyl diphosphate synthase WBP_1052 PF01765 Ribosome recycling factor WBP_1053 PF00696 Amino acid kinase family WBP_1054 PF00889 Elongation factor TS WBP_1055 PF00318 Ribosomal protein S2 WBP_1058 PF03471 Transporter associated domain WBP_1058 PF00571 CBS domain