locus-tag class description wCauA_00005 PF03471 Transporter associated domain wCauA_00005 PF00571 CBS domain wCauA_00020 PF02769 AIR synthase related protein, C-terminal domain wCauA_00020 PF00586 AIR synthase related protein, N-terminal domain wCauA_00025 PF01259 SAICAR synthetase wCauA_00030 PF01746 tRNA (Guanine-1)-methyltransferase wCauA_00035 PF01245 Ribosomal protein L19 wCauA_00040 PF00528 Binding-protein-dependent transport system inner membrane component wCauA_00060 PF17676 LD-carboxypeptidase C-terminal domain wCauA_00060 PF02016 LD-carboxypeptidase N-terminal domain wCauA_00065 PF03099 Biotin/lipoate A/B protein ligase family wCauA_00080 PF04860 Phage portal protein wCauA_00090 PF03023 Lipid II flippase MurJ wCauA_00100 PF13932 GidA associated domain wCauA_00100 PF01134 Glucose inhibited division protein A wCauA_00105 PF00557 Metallopeptidase family M24 wCauA_00105 PF01321 Creatinase/Prolidase N-terminal domain wCauA_00125 PF01527 Transposase wCauA_00135 PF13276 HTH-like domain wCauA_00135 PF13333 Integrase core domain wCauA_00135 PF00665 Integrase core domain wCauA_00140 PF01367 5'-3' exonuclease, C-terminal SAM fold wCauA_00140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain wCauA_00140 PF00476 DNA polymerase family A wCauA_00170 PF01523 Putative modulator of DNA gyrase wCauA_00175 PF00266 Aminotransferase class-V wCauA_00190 PF13288 DXP reductoisomerase C-terminal domain wCauA_00190 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase wCauA_00190 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain wCauA_00200 PF00005 ABC transporter wCauA_00205 PF02405 Permease MlaE wCauA_00210 PF01783 Ribosomal L32p protein family wCauA_00215 PF02504 Fatty acid synthesis protein wCauA_00220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal wCauA_00220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III wCauA_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_00240 PF01926 50S ribosome-binding GTPase wCauA_00240 PF12631 MnmE helical domain wCauA_00240 PF10396 GTP-binding protein TrmE N-terminus wCauA_00245 PF12838 4Fe-4S dicluster domain wCauA_00250 PF01509 TruB family pseudouridylate synthase (N terminal domain) wCauA_00250 PF16198 tRNA pseudouridylate synthase B C-terminal domain wCauA_00255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain wCauA_00255 PF03129 Anticodon binding domain wCauA_00255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wCauA_00260 PF05198 Translation initiation factor IF-3, N-terminal domain wCauA_00260 PF00707 Translation initiation factor IF-3, C-terminal domain wCauA_00265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit wCauA_00265 PF10531 SLBB domain wCauA_00265 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region wCauA_00310 PF03100 CcmE wCauA_00315 PF08279 HTH domain wCauA_00315 PF03099 Biotin/lipoate A/B protein ligase family wCauA_00315 PF02237 Biotin protein ligase C terminal domain wCauA_00320 PF00361 Proton-conducting membrane transporter wCauA_00325 PF00361 Proton-conducting membrane transporter wCauA_00330 PF00361 Proton-conducting membrane transporter wCauA_00330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wCauA_00335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L wCauA_00340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 wCauA_00350 PF13361 UvrD-like helicase C-terminal domain wCauA_00350 PF00580 UvrD/REP helicase N-terminal domain wCauA_00390 PF01219 Prokaryotic diacylglycerol kinase wCauA_00395 PF00849 RNA pseudouridylate synthase wCauA_00395 PF01479 S4 domain wCauA_00405 PF00753 Metallo-beta-lactamase superfamily wCauA_00405 PF03772 Competence protein wCauA_00415 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region wCauA_00415 PF01243 Pyridoxamine 5'-phosphate oxidase wCauA_00420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain wCauA_00420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain wCauA_00420 PF06827 Zinc finger found in FPG and IleRS wCauA_00430 PF01039 Carboxyl transferase domain wCauA_00445 PF00285 Citrate synthase, C-terminal domain wCauA_00450 PF01649 Ribosomal protein S20 wCauA_00460 PF00589 Phage integrase family wCauA_00460 PF02899 Phage integrase, N-terminal SAM-like domain wCauA_00470 PF01594 AI-2E family transporter wCauA_00475 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase wCauA_00475 PF02542 YgbB family wCauA_00485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain wCauA_00485 PF02222 ATP-grasp domain wCauA_00490 PF04379 ApaG domain wCauA_00500 PF00528 Binding-protein-dependent transport system inner membrane component wCauA_00515 PF01131 DNA topoisomerase wCauA_00515 PF13368 Topoisomerase C-terminal repeat wCauA_00515 PF01396 Topoisomerase DNA binding C4 zinc finger wCauA_00515 PF01751 Toprim domain wCauA_00530 PF08338 Domain of unknown function (DUF1731) wCauA_00530 PF01370 NAD dependent epimerase/dehydratase family wCauA_00535 PF01225 Mur ligase family, catalytic domain wCauA_00535 PF02875 Mur ligase family, glutamate ligase domain wCauA_00535 PF08245 Mur ligase middle domain wCauA_00550 PF01230 HIT domain wCauA_00555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 wCauA_00560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit wCauA_00565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit wCauA_00570 PF00056 lactate/malate dehydrogenase, NAD binding domain wCauA_00570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain wCauA_00575 PF01026 TatD related DNase wCauA_00580 PF00293 NUDIX domain wCauA_00595 PF00579 tRNA synthetases class I (W and Y) wCauA_00610 PF01330 RuvA N terminal domain wCauA_00610 PF07499 RuvA, C-terminal domain wCauA_00615 PF17864 RuvB AAA lid domain wCauA_00615 PF05496 Holliday junction DNA helicase RuvB P-loop domain wCauA_00615 PF05491 RuvB C-terminal winged helix domain wCauA_00625 PF02245 Methylpurine-DNA glycosylase (MPG) wCauA_00630 PF00156 Phosphoribosyl transferase domain wCauA_00630 PF13537 Glutamine amidotransferase domain wCauA_00635 PF01098 Cell cycle protein wCauA_00640 PF00361 Proton-conducting membrane transporter wCauA_00660 PF01351 Ribonuclease HII wCauA_00665 PF00953 Glycosyl transferase family 4 wCauA_00680 PF00107 Zinc-binding dehydrogenase wCauA_00680 PF08240 Alcohol dehydrogenase GroES-like domain wCauA_00690 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 wCauA_00695 PF01027 Inhibitor of apoptosis-promoting Bax1 wCauA_00700 PF08032 RNA 2'-O ribose methyltransferase substrate binding wCauA_00700 PF00588 SpoU rRNA Methylase family wCauA_00710 PF02774 Semialdehyde dehydrogenase, dimerisation domain wCauA_00710 PF01118 Semialdehyde dehydrogenase, NAD binding domain wCauA_00735 PF13520 Amino acid permease wCauA_00745 PF13840 ACT domain wCauA_00745 PF00696 Amino acid kinase family wCauA_00745 PF01842 ACT domain wCauA_00755 PF00162 Phosphoglycerate kinase wCauA_00770 PF03060 Nitronate monooxygenase wCauA_00785 PF03135 CagE, TrbE, VirB family, component of type IV transporter system wCauA_00805 PF00364 Biotin-requiring enzyme wCauA_00805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) wCauA_00805 PF02817 e3 binding domain wCauA_00820 PF02132 RecR protein wCauA_00820 PF13662 Toprim domain wCauA_00825 PF00334 Nucleoside diphosphate kinase wCauA_00835 PF00762 Ferrochelatase wCauA_00850 PF00227 Proteasome subunit wCauA_00855 PF10431 C-terminal, D2-small domain, of ClpB protein wCauA_00855 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_00855 PF07724 AAA domain (Cdc48 subfamily) wCauA_00865 PF00348 Polyprenyl synthetase wCauA_00870 PF00550 Phosphopantetheine attachment site wCauA_00875 PF02801 Beta-ketoacyl synthase, C-terminal domain wCauA_00875 PF00109 Beta-ketoacyl synthase, N-terminal domain wCauA_00885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) wCauA_00890 PF02511 Thymidylate synthase complementing protein wCauA_00900 PF17764 3′ DNA-binding domain (3′BD) wCauA_00900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain wCauA_00900 PF18074 Primosomal protein N C-terminal domain wCauA_00900 PF00270 DEAD/DEAH box helicase wCauA_00900 PF00271 Helicase conserved C-terminal domain wCauA_00905 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal wCauA_00905 PF00355 Rieske [2Fe-2S] domain wCauA_00910 PF00521 DNA gyrase/topoisomerase IV, subunit A wCauA_00910 PF03989 DNA gyrase C-terminal domain, beta-propeller wCauA_00930 PF02632 BioY family wCauA_00935 PF00881 Nitroreductase family wCauA_00940 PF01678 Diaminopimelate epimerase wCauA_00945 PF00549 CoA-ligase wCauA_00945 PF02629 CoA binding domain wCauA_00950 PF00549 CoA-ligase wCauA_00950 PF08442 ATP-grasp domain wCauA_00965 PF04452 RNA methyltransferase wCauA_00980 PF01218 Coproporphyrinogen III oxidase wCauA_00985 PF13188 PAS domain wCauA_00985 PF08448 PAS fold wCauA_00985 PF00072 Response regulator receiver domain wCauA_00985 PF00512 His Kinase A (phospho-acceptor) domain wCauA_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wCauA_00990 PF13614 AAA domain wCauA_00995 PF17762 HTH domain found in ParB protein wCauA_00995 PF02195 ParB-like nuclease domain wCauA_01025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit wCauA_01030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit wCauA_01040 PF00483 Nucleotidyl transferase wCauA_01040 PF01050 Mannose-6-phosphate isomerase wCauA_01045 PF02687 FtsX-like permease family wCauA_01045 PF12704 MacB-like periplasmic core domain wCauA_01070 PF00231 ATP synthase wCauA_01075 PF01523 Putative modulator of DNA gyrase wCauA_01080 PF00313 'Cold-shock' DNA-binding domain wCauA_01085 PF00271 Helicase conserved C-terminal domain wCauA_01085 PF00270 DEAD/DEAH box helicase wCauA_01090 PF10431 C-terminal, D2-small domain, of ClpB protein wCauA_01090 PF07724 AAA domain (Cdc48 subfamily) wCauA_01090 PF17871 AAA lid domain wCauA_01090 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_01090 PF02861 Clp amino terminal domain, pathogenicity island component wCauA_01095 PF01791 DeoC/LacD family aldolase wCauA_01105 PF01180 Dihydroorotate dehydrogenase wCauA_01110 PF00035 Double-stranded RNA binding motif wCauA_01110 PF14622 Ribonuclease-III-like wCauA_01120 PF13091 PLD-like domain wCauA_01150 PF00210 Ferritin-like domain wCauA_01160 PF00999 Sodium/hydrogen exchanger family wCauA_01160 PF02254 TrkA-N domain wCauA_01170 PF02223 Thymidylate kinase wCauA_01180 PF06480 FtsH Extracellular wCauA_01180 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_01180 PF17862 AAA+ lid domain wCauA_01180 PF01434 Peptidase family M41 wCauA_01185 PF01171 PP-loop family wCauA_01190 PF00691 OmpA family wCauA_01220 PF00719 Inorganic pyrophosphatase wCauA_01230 PF09312 SurA N-terminal domain wCauA_01230 PF00639 PPIC-type PPIASE domain wCauA_01235 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_01260 PF03717 Penicillin-binding Protein dimerisation domain wCauA_01260 PF00905 Penicillin binding protein transpeptidase domain wCauA_01265 PF02401 LytB protein wCauA_01305 PF04002 RadC-like JAB domain wCauA_01315 PF08671 Anti-repressor SinI wCauA_01315 PF01381 Helix-turn-helix wCauA_01335 PF13091 PLD-like domain wCauA_01445 PF00011 Hsp20/alpha crystallin family wCauA_01460 PF06055 Exopolysaccharide synthesis, ExoD wCauA_01490 PF04002 RadC-like JAB domain wCauA_01505 PF01381 Helix-turn-helix wCauA_01645 PF04984 Phage tail sheath protein subtilisin-like domain wCauA_01645 PF17482 Phage tail sheath C-terminal domain wCauA_01715 PF01555 DNA methylase wCauA_01715 PF18755 Restriction Enzyme Adenine Methylase Associated wCauA_01795 PF06250 YhcG PDDEXK nuclease domain wCauA_01795 PF17761 DUF1016 N-terminal domain wCauA_01885 PF13091 PLD-like domain wCauA_01900 PF01381 Helix-turn-helix wCauA_01900 PF08671 Anti-repressor SinI wCauA_01935 PF04551 GcpE protein wCauA_01955 PF01580 FtsK/SpoIIIE family wCauA_01955 PF09397 Ftsk gamma domain wCauA_01955 PF17854 FtsK alpha domain wCauA_01955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE wCauA_01960 PF02325 YGGT family wCauA_01990 PF00677 Lumazine binding domain wCauA_02000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain wCauA_02000 PF01409 tRNA synthetases class II core domain (F) wCauA_02005 PF00132 Bacterial transferase hexapeptide (six repeats) wCauA_02005 PF14602 Hexapeptide repeat of succinyl-transferase wCauA_02005 PF12804 MobA-like NTP transferase domain wCauA_02040 PF00665 Integrase core domain wCauA_02040 PF13333 Integrase core domain wCauA_02040 PF13276 HTH-like domain wCauA_02060 PF10609 NUBPL iron-transfer P-loop NTPase wCauA_02085 PF01494 FAD binding domain wCauA_02105 PF01195 Peptidyl-tRNA hydrolase wCauA_02110 PF14693 Ribosomal protein TL5, C-terminal domain wCauA_02110 PF01386 Ribosomal L25p family wCauA_02125 PF01795 MraW methylase family wCauA_02130 PF00083 Sugar (and other) transporter wCauA_02130 PF07690 Major Facilitator Superfamily wCauA_02135 PF00557 Metallopeptidase family M24 wCauA_02145 PF02491 SHS2 domain inserted in FTSA wCauA_02150 PF01327 Polypeptide deformylase wCauA_02155 PF03167 Uracil DNA glycosylase superfamily wCauA_02175 PF00384 Molybdopterin oxidoreductase wCauA_02175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region wCauA_02175 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal wCauA_02180 PF00146 NADH dehydrogenase wCauA_02185 PF00490 Delta-aminolevulinic acid dehydratase wCauA_02195 PF02091 Glycyl-tRNA synthetase alpha subunit wCauA_02200 PF05746 DALR anticodon binding domain wCauA_02200 PF02092 Glycyl-tRNA synthetase beta subunit wCauA_02205 PF02151 UvrB/uvrC motif wCauA_02205 PF08459 UvrC Helix-hairpin-helix N-terminal wCauA_02205 PF01541 GIY-YIG catalytic domain wCauA_02215 PF00005 ABC transporter wCauA_02215 PF08402 TOBE domain wCauA_02220 PF02416 mttA/Hcf106 family wCauA_02230 PF01406 tRNA synthetases class I (C) catalytic domain wCauA_02230 PF09190 DALR domain wCauA_02270 PF02637 GatB domain wCauA_02270 PF02934 GatB/GatE catalytic domain wCauA_02275 PF03652 Holliday junction resolvase wCauA_02280 PF02075 Crossover junction endodeoxyribonuclease RuvC wCauA_02285 PF00510 Cytochrome c oxidase subunit III wCauA_02295 PF03070 TENA/THI-4/PQQC family wCauA_02300 PF02773 S-adenosylmethionine synthetase, C-terminal domain wCauA_02300 PF02772 S-adenosylmethionine synthetase, central domain wCauA_02300 PF00438 S-adenosylmethionine synthetase, N-terminal domain wCauA_02310 PF01016 Ribosomal L27 protein wCauA_02315 PF00829 Ribosomal prokaryotic L21 protein wCauA_02330 PF01728 FtsJ-like methyltransferase wCauA_02335 PF10691 Protein of unknown function (DUF2497) wCauA_02345 PF00572 Ribosomal protein L13 wCauA_02350 PF00380 Ribosomal protein S9/S16 wCauA_02360 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ wCauA_02375 PF13333 Integrase core domain wCauA_02375 PF00665 Integrase core domain wCauA_02375 PF13276 HTH-like domain wCauA_02385 PF08264 Anticodon-binding domain of tRNA wCauA_02385 PF00133 tRNA synthetases class I (I, L, M and V) wCauA_02385 PF13603 Leucyl-tRNA synthetase, Domain 2 wCauA_02385 PF09334 tRNA synthetases class I (M) wCauA_02390 PF01551 Peptidase family M23 wCauA_02400 PF00216 Bacterial DNA-binding protein wCauA_02410 PF02789 Cytosol aminopeptidase family, N-terminal domain wCauA_02410 PF00883 Cytosol aminopeptidase family, catalytic domain wCauA_02450 PF00226 DnaJ domain wCauA_02450 PF00684 DnaJ central domain wCauA_02450 PF01556 DnaJ C terminal domain wCauA_02455 PF12706 Beta-lactamase superfamily domain wCauA_02455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain wCauA_02455 PF17770 Ribonuclease J C-terminal domain wCauA_02460 PF07676 WD40-like Beta Propeller Repeat wCauA_02460 PF04052 TolB amino-terminal domain wCauA_02465 PF02686 Glu-tRNAGln amidotransferase C subunit wCauA_02470 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase wCauA_02470 PF14572 Phosphoribosyl synthetase-associated domain wCauA_02500 PF02843 Phosphoribosylglycinamide synthetase, C domain wCauA_02500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain wCauA_02500 PF02844 Phosphoribosylglycinamide synthetase, N domain wCauA_02505 PF02403 Seryl-tRNA synthetase N-terminal domain wCauA_02505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wCauA_02520 PF01527 Transposase wCauA_02540 PF00204 DNA gyrase B wCauA_02540 PF00986 DNA gyrase B subunit, carboxyl terminus wCauA_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wCauA_02540 PF01751 Toprim domain wCauA_02545 PF02630 SCO1/SenC wCauA_02550 PF00929 Exonuclease wCauA_02560 PF02556 Preprotein translocase subunit SecB wCauA_02565 PF00330 Aconitase family (aconitate hydratase) wCauA_02565 PF00694 Aconitase C-terminal domain wCauA_02570 PF18327 Proline utilization A proline dehydrogenase N-terminal domain wCauA_02570 PF14850 DNA-binding domain of Proline dehydrogenase wCauA_02570 PF01619 Proline dehydrogenase wCauA_02570 PF00171 Aldehyde dehydrogenase family wCauA_02580 PF00893 Small Multidrug Resistance protein wCauA_02585 PF00893 Small Multidrug Resistance protein wCauA_02590 PF07943 Penicillin-binding protein 5, C-terminal domain wCauA_02590 PF00768 D-alanyl-D-alanine carboxypeptidase wCauA_02595 PF08478 POTRA domain, FtsQ-type wCauA_02595 PF03799 Cell division protein FtsQ wCauA_02600 PF07478 D-ala D-ala ligase C-terminus wCauA_02600 PF01820 D-ala D-ala ligase N-terminus wCauA_02610 PF00037 4Fe-4S binding domain wCauA_02610 PF11953 Domain of unknown function (DUF3470) wCauA_02615 PF17782 DprA winged helix domain wCauA_02615 PF02481 DNA recombination-mediator protein A wCauA_02620 PF00121 Triosephosphate isomerase wCauA_02630 PF00398 Ribosomal RNA adenine dimethylase wCauA_02635 PF00478 IMP dehydrogenase / GMP reductase domain wCauA_02635 PF00571 CBS domain wCauA_02645 PF13333 Integrase core domain wCauA_02645 PF00665 Integrase core domain wCauA_02645 PF13276 HTH-like domain wCauA_02650 PF02355 Protein export membrane protein wCauA_02690 PF13333 Integrase core domain wCauA_02690 PF13276 HTH-like domain wCauA_02690 PF00665 Integrase core domain wCauA_02700 PF01121 Dephospho-CoA kinase wCauA_02705 PF01612 3'-5' exonuclease wCauA_02705 PF00570 HRDC domain wCauA_02715 PF05190 MutS family domain IV wCauA_02715 PF05188 MutS domain II wCauA_02715 PF01624 MutS domain I wCauA_02715 PF00488 MutS domain V wCauA_02715 PF05192 MutS domain III wCauA_02730 PF00571 CBS domain wCauA_02730 PF03471 Transporter associated domain wCauA_02730 PF03741 Integral membrane protein TerC family wCauA_02735 PF00117 Glutamine amidotransferase class-I wCauA_02735 PF00958 GMP synthase C terminal domain wCauA_02735 PF02540 NAD synthase wCauA_02740 PF02867 Ribonucleotide reductase, barrel domain wCauA_02740 PF00317 Ribonucleotide reductase, all-alpha domain wCauA_02740 PF03477 ATP cone domain wCauA_02770 PF00468 Ribosomal protein L34 wCauA_02775 PF00528 Binding-protein-dependent transport system inner membrane component wCauA_02780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wCauA_02780 PF02874 ATP synthase alpha/beta family, beta-barrel domain wCauA_02785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain wCauA_02795 PF13276 HTH-like domain wCauA_02795 PF00665 Integrase core domain wCauA_02795 PF13333 Integrase core domain wCauA_02825 PF04560 RNA polymerase Rpb2, domain 7 wCauA_02825 PF04997 RNA polymerase Rpb1, domain 1 wCauA_02825 PF00623 RNA polymerase Rpb1, domain 2 wCauA_02825 PF04983 RNA polymerase Rpb1, domain 3 wCauA_02825 PF04998 RNA polymerase Rpb1, domain 5 wCauA_02825 PF04563 RNA polymerase beta subunit wCauA_02825 PF04565 RNA polymerase Rpb2, domain 3 wCauA_02825 PF10385 RNA polymerase beta subunit external 1 domain wCauA_02825 PF00562 RNA polymerase Rpb2, domain 6 wCauA_02825 PF05000 RNA polymerase Rpb1, domain 4 wCauA_02825 PF04561 RNA polymerase Rpb2, domain 2 wCauA_02835 PF00466 Ribosomal protein L10 wCauA_02840 PF00687 Ribosomal protein L1p/L10e family wCauA_02845 PF03946 Ribosomal protein L11, N-terminal domain wCauA_02845 PF00298 Ribosomal protein L11, RNA binding domain wCauA_02850 PF00467 KOW motif wCauA_02850 PF02357 Transcription termination factor nusG wCauA_02865 PF03144 Elongation factor Tu domain 2 wCauA_02865 PF00009 Elongation factor Tu GTP binding domain wCauA_02865 PF03143 Elongation factor Tu C-terminal domain wCauA_02870 PF00679 Elongation factor G C-terminus wCauA_02870 PF00009 Elongation factor Tu GTP binding domain wCauA_02870 PF03764 Elongation factor G, domain IV wCauA_02870 PF14492 Elongation Factor G, domain II wCauA_02870 PF03144 Elongation factor Tu domain 2 wCauA_02875 PF00177 Ribosomal protein S7p/S5e wCauA_02880 PF00164 Ribosomal protein S12/S23 wCauA_02885 PF17827 PrmC N-terminal domain wCauA_02885 PF13847 Methyltransferase domain wCauA_02895 PF02534 Type IV secretory system Conjugative DNA transfer wCauA_02900 PF00437 Type II/IV secretion system protein wCauA_02915 PF04335 VirB8 protein wCauA_02920 PF00925 GTP cyclohydrolase II wCauA_02935 PF08299 Bacterial dnaA protein helix-turn-helix wCauA_02935 PF11638 DnaA N-terminal domain wCauA_02935 PF00308 Bacterial dnaA protein wCauA_02940 PF00120 Glutamine synthetase, catalytic domain wCauA_02950 PF00873 AcrB/AcrD/AcrF family wCauA_02955 PF13184 NusA-like KH domain wCauA_02955 PF08529 NusA N-terminal domain wCauA_02955 PF00575 S1 RNA binding domain wCauA_02960 PF04760 Translation initiation factor IF-2, N-terminal region wCauA_02960 PF11987 Translation-initiation factor 2 wCauA_02960 PF00009 Elongation factor Tu GTP binding domain wCauA_02965 PF02033 Ribosome-binding factor A wCauA_02970 PF01040 UbiA prenyltransferase family wCauA_02980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase wCauA_02985 PF13784 Fic/DOC family N-terminal wCauA_02985 PF02661 Fic/DOC family wCauA_03015 PF00676 Dehydrogenase E1 component wCauA_03015 PF16870 2-oxoglutarate dehydrogenase C-terminal wCauA_03015 PF02779 Transketolase, pyrimidine binding domain wCauA_03015 PF16078 2-oxoglutarate dehydrogenase N-terminus wCauA_03025 PF01119 DNA mismatch repair protein, C-terminal domain wCauA_03025 PF08676 MutL C terminal dimerisation domain wCauA_03030 PF00731 AIR carboxylase wCauA_03040 PF01192 RNA polymerase Rpb6 wCauA_03050 PF03334 Na+/H+ antiporter subunit wCauA_03055 PF00361 Proton-conducting membrane transporter wCauA_03055 PF13244 Domain of unknown function (DUF4040) wCauA_03055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wCauA_03065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L wCauA_03070 PF04546 Sigma-70, non-essential region wCauA_03070 PF00140 Sigma-70 factor, region 1.2 wCauA_03070 PF04542 Sigma-70 region 2 wCauA_03070 PF04539 Sigma-70 region 3 wCauA_03070 PF04545 Sigma-70, region 4 wCauA_03070 PF03979 Sigma-70 factor, region 1.1 wCauA_03090 PF02142 MGS-like domain wCauA_03090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain wCauA_03090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain wCauA_03100 PF03631 Virulence factor BrkB wCauA_03115 PF02463 RecF/RecN/SMC N terminal domain wCauA_03120 PF00578 AhpC/TSA family wCauA_03125 PF00512 His Kinase A (phospho-acceptor) domain wCauA_03125 PF00989 PAS fold wCauA_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase wCauA_03130 PF00202 Aminotransferase class-III wCauA_03135 PF01782 RimM N-terminal domain wCauA_03135 PF05239 PRC-barrel domain wCauA_03140 PF08207 Elongation factor P (EF-P) KOW-like domain wCauA_03140 PF01132 Elongation factor P (EF-P) OB domain wCauA_03140 PF09285 Elongation factor P, C-terminal wCauA_03150 PF00155 Aminotransferase class I and II wCauA_03160 PF00183 Hsp90 protein wCauA_03190 PF07690 Major Facilitator Superfamily wCauA_03195 PF03462 PCRF domain wCauA_03195 PF00472 RF-1 domain wCauA_03200 PF01926 50S ribosome-binding GTPase wCauA_03205 PF00696 Amino acid kinase family wCauA_03215 PF00692 dUTPase wCauA_03225 PF01029 NusB family wCauA_03230 PF00885 6,7-dimethyl-8-ribityllumazine synthase wCauA_03235 PF02096 60Kd inner membrane protein wCauA_03235 PF14849 YidC periplasmic domain wCauA_03245 PF02355 Protein export membrane protein wCauA_03245 PF07549 SecD/SecF GG Motif wCauA_03260 PF01578 Cytochrome C assembly protein wCauA_03260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal wCauA_03270 PF01979 Amidohydrolase family wCauA_03275 PF00375 Sodium:dicarboxylate symporter family wCauA_03280 PF00156 Phosphoribosyl transferase domain wCauA_03310 PF07724 AAA domain (Cdc48 subfamily) wCauA_03310 PF17871 AAA lid domain wCauA_03310 PF02861 Clp amino terminal domain, pathogenicity island component wCauA_03310 PF10431 C-terminal, D2-small domain, of ClpB protein wCauA_03310 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_03315 PF05088 Bacterial NAD-glutamate dehydrogenase wCauA_03325 PF00990 Diguanylate cyclase, GGDEF domain wCauA_03325 PF00072 Response regulator receiver domain wCauA_03330 PF02565 Recombination protein O C terminal wCauA_03330 PF11967 Recombination protein O N terminal wCauA_03350 PF00268 Ribonucleotide reductase, small chain wCauA_03360 PF00814 Glycoprotease family wCauA_03375 PF00596 Class II Aldolase and Adducin N-terminal domain wCauA_03385 PF13276 HTH-like domain wCauA_03385 PF13333 Integrase core domain wCauA_03385 PF00665 Integrase core domain wCauA_03390 PF02646 RmuC family wCauA_03395 PF01609 Transposase DDE domain wCauA_03410 PF05746 DALR anticodon binding domain wCauA_03410 PF03485 Arginyl tRNA synthetase N terminal domain wCauA_03410 PF00750 tRNA synthetases class I (R) wCauA_03425 PF01527 Transposase wCauA_03430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit wCauA_03435 PF00202 Aminotransferase class-III wCauA_03440 PF00571 CBS domain wCauA_03440 PF03471 Transporter associated domain wCauA_03440 PF01595 Cyclin M transmembrane N-terminal domain wCauA_03445 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) wCauA_03450 PF02441 Flavoprotein wCauA_03455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain wCauA_03455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain wCauA_03510 PF04002 RadC-like JAB domain wCauA_03545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region wCauA_03545 PF01872 RibD C-terminal domain wCauA_03550 PF13286 Phosphohydrolase-associated domain wCauA_03550 PF01966 HD domain wCauA_03555 PF01521 Iron-sulphur cluster biosynthesis wCauA_03560 PF00005 ABC transporter wCauA_03570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) wCauA_03575 PF00266 Aminotransferase class-V wCauA_03590 PF00814 Glycoprotease family wCauA_03600 PF02371 Transposase IS116/IS110/IS902 family wCauA_03600 PF01548 Transposase wCauA_03620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I wCauA_03620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II wCauA_03620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III wCauA_03620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain wCauA_03630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain wCauA_03630 PF00391 PEP-utilising enzyme, mobile domain wCauA_03630 PF02896 PEP-utilising enzyme, TIM barrel domain wCauA_03640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded wCauA_03655 PF00117 Glutamine amidotransferase class-I wCauA_03655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain wCauA_03670 PF03143 Elongation factor Tu C-terminal domain wCauA_03670 PF03144 Elongation factor Tu domain 2 wCauA_03670 PF00009 Elongation factor Tu GTP binding domain wCauA_03675 PF00338 Ribosomal protein S10p/S20e wCauA_03680 PF00297 Ribosomal protein L3 wCauA_03685 PF00573 Ribosomal protein L4/L1 family wCauA_03690 PF00276 Ribosomal protein L23 wCauA_03695 PF00181 Ribosomal Proteins L2, RNA binding domain wCauA_03695 PF03947 Ribosomal Proteins L2, C-terminal domain wCauA_03700 PF00203 Ribosomal protein S19 wCauA_03705 PF00237 Ribosomal protein L22p/L17e wCauA_03710 PF07650 KH domain wCauA_03710 PF00189 Ribosomal protein S3, C-terminal domain wCauA_03715 PF00252 Ribosomal protein L16p/L10e wCauA_03720 PF00831 Ribosomal L29 protein wCauA_03725 PF00366 Ribosomal protein S17 wCauA_03730 PF00238 Ribosomal protein L14p/L23e wCauA_03735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 wCauA_03740 PF00673 ribosomal L5P family C-terminus wCauA_03740 PF00281 Ribosomal protein L5 wCauA_03745 PF00253 Ribosomal protein S14p/S29e wCauA_03750 PF00410 Ribosomal protein S8 wCauA_03755 PF00347 Ribosomal protein L6 wCauA_03760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast wCauA_03765 PF03719 Ribosomal protein S5, C-terminal domain wCauA_03765 PF00333 Ribosomal protein S5, N-terminal domain wCauA_03770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A wCauA_03775 PF00344 SecY translocase wCauA_03785 PF00416 Ribosomal protein S13/S18 wCauA_03790 PF00411 Ribosomal protein S11 wCauA_03795 PF01000 RNA polymerase Rpb3/RpoA insert domain wCauA_03795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain wCauA_03795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain wCauA_03800 PF01196 Ribosomal protein L17 wCauA_03805 PF02021 Uncharacterised protein family UPF0102 wCauA_03810 PF00213 ATP synthase delta (OSCP) subunit wCauA_03815 PF02874 ATP synthase alpha/beta family, beta-barrel domain wCauA_03815 PF00306 ATP synthase alpha/beta chain, C terminal domain wCauA_03815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wCauA_03820 PF03449 Transcription elongation factor, N-terminal wCauA_03820 PF01272 Transcription elongation factor, GreA/GreB, C-term wCauA_03825 PF00925 GTP cyclohydrolase II wCauA_03825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase wCauA_03845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion wCauA_03845 PF00529 HlyD membrane-fusion protein of T1SS wCauA_03850 PF01527 Transposase wCauA_03860 PF13276 HTH-like domain wCauA_03860 PF13333 Integrase core domain wCauA_03860 PF00665 Integrase core domain wCauA_03910 PF01527 Transposase wCauA_03925 PF02790 Cytochrome C oxidase subunit II, transmembrane domain wCauA_03925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain wCauA_03930 PF00115 Cytochrome C and Quinol oxidase polypeptide I wCauA_03935 PF01040 UbiA prenyltransferase family wCauA_03940 PF00075 RNase H wCauA_03970 PF02371 Transposase IS116/IS110/IS902 family wCauA_03970 PF01548 Transposase wCauA_03975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain wCauA_03975 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_03985 PF03033 Glycosyltransferase family 28 N-terminal domain wCauA_03985 PF04101 Glycosyltransferase family 28 C-terminal domain wCauA_03990 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain wCauA_03990 PF02951 Prokaryotic glutathione synthetase, N-terminal domain wCauA_03995 PF04972 BON domain wCauA_04005 PF05698 Bacterial trigger factor protein (TF) C-terminus wCauA_04005 PF05697 Bacterial trigger factor protein (TF) wCauA_04005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase wCauA_04010 PF00574 Clp protease wCauA_04015 PF10431 C-terminal, D2-small domain, of ClpB protein wCauA_04015 PF07724 AAA domain (Cdc48 subfamily) wCauA_04015 PF06689 ClpX C4-type zinc finger wCauA_04020 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_04020 PF05362 Lon protease (S16) C-terminal proteolytic domain wCauA_04020 PF02190 ATP-dependent protease La (LON) substrate-binding domain wCauA_04045 PF00950 ABC 3 transport family wCauA_04055 PF08544 GHMP kinases C terminal wCauA_04055 PF00288 GHMP kinases N terminal domain wCauA_04060 PF13361 UvrD-like helicase C-terminal domain wCauA_04060 PF12705 PD-(D/E)XK nuclease superfamily wCauA_04060 PF00580 UvrD/REP helicase N-terminal domain wCauA_04085 PF06271 RDD family wCauA_04095 PF03796 DnaB-like helicase C terminal domain wCauA_04095 PF00772 DnaB-like helicase N terminal domain wCauA_04105 PF09334 tRNA synthetases class I (M) wCauA_04105 PF08264 Anticodon-binding domain of tRNA wCauA_04115 PF08241 Methyltransferase domain wCauA_04125 PF13662 Toprim domain wCauA_04125 PF08275 DNA primase catalytic core, N-terminal domain wCauA_04125 PF01807 CHC2 zinc finger wCauA_04130 PF13784 Fic/DOC family N-terminal wCauA_04130 PF02661 Fic/DOC family wCauA_04135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion wCauA_04150 PF01527 Transposase wCauA_04160 PF00444 Ribosomal protein L36 wCauA_04165 PF03618 Kinase/pyrophosphorylase wCauA_04170 PF01578 Cytochrome C assembly protein wCauA_04185 PF00709 Adenylosuccinate synthetase wCauA_04205 PF01176 Translation initiation factor 1A / IF-1 wCauA_04210 PF02545 Maf-like protein wCauA_04240 PF01235 Sodium:alanine symporter family wCauA_04270 PF00118 TCP-1/cpn60 chaperonin family wCauA_04275 PF00166 Chaperonin 10 Kd subunit wCauA_04280 PF01571 Aminomethyltransferase folate-binding domain wCauA_04290 PF01368 DHH family wCauA_04290 PF02272 DHHA1 domain wCauA_04290 PF17768 RecJ OB domain wCauA_04320 PF05173 Dihydrodipicolinate reductase, C-terminus wCauA_04320 PF01113 Dihydrodipicolinate reductase, N-terminus wCauA_04325 PF00005 ABC transporter wCauA_04340 PF13333 Integrase core domain wCauA_04340 PF13276 HTH-like domain wCauA_04340 PF00665 Integrase core domain wCauA_04350 PF03448 MgtE intracellular N domain wCauA_04350 PF01769 Divalent cation transporter wCauA_04350 PF00571 CBS domain wCauA_04370 PF00692 dUTPase wCauA_04390 PF07690 Major Facilitator Superfamily wCauA_04400 PF02779 Transketolase, pyrimidine binding domain wCauA_04400 PF02780 Transketolase, C-terminal domain wCauA_04400 PF00456 Transketolase, thiamine diphosphate binding domain wCauA_04405 PF01479 S4 domain wCauA_04405 PF00163 Ribosomal protein S4/S9 N-terminal domain wCauA_04415 PF04384 Iron-sulphur cluster assembly wCauA_04425 PF00830 Ribosomal L28 family wCauA_04430 PF04055 Radical SAM superfamily wCauA_04430 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family wCauA_04435 PF01209 ubiE/COQ5 methyltransferase family wCauA_04440 PF01098 Cell cycle protein wCauA_04455 PF00005 ABC transporter wCauA_04455 PF00664 ABC transporter transmembrane region wCauA_04470 PF01609 Transposase DDE domain wCauA_04485 PF00034 Cytochrome c wCauA_04495 PF00579 tRNA synthetases class I (W and Y) wCauA_04500 PF01025 GrpE wCauA_04505 PF00348 Polyprenyl synthetase wCauA_04510 PF00886 Ribosomal protein S16 wCauA_04515 PF00639 PPIC-type PPIASE domain wCauA_04525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain wCauA_04525 PF07497 Rho termination factor, RNA-binding domain wCauA_04525 PF07498 Rho termination factor, N-terminal domain wCauA_04550 PF18324 Hypothetical protein TT1725 wCauA_04550 PF00180 Isocitrate/isopropylmalate dehydrogenase wCauA_04555 PF10576 Iron-sulfur binding domain of endonuclease III wCauA_04555 PF00633 Helix-hairpin-helix motif wCauA_04555 PF00730 HhH-GPD superfamily base excision DNA repair protein wCauA_04560 PF07687 Peptidase dimerisation domain wCauA_04560 PF01546 Peptidase family M20/M25/M40 wCauA_04565 PF13685 Iron-containing alcohol dehydrogenase wCauA_04575 PF10397 Adenylosuccinate lyase C-terminus wCauA_04575 PF00206 Lyase wCauA_04585 PF01281 Ribosomal protein L9, N-terminal domain wCauA_04585 PF03948 Ribosomal protein L9, C-terminal domain wCauA_04590 PF01084 Ribosomal protein S18 wCauA_04595 PF01250 Ribosomal protein S6 wCauA_04600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain wCauA_04600 PF02811 PHP domain wCauA_04600 PF07733 Bacterial DNA polymerase III alpha NTPase domain wCauA_04600 PF14579 Helix-hairpin-helix motif wCauA_04610 PF00749 tRNA synthetases class I (E and Q), catalytic domain wCauA_04615 PF03120 NAD-dependent DNA ligase OB-fold domain wCauA_04615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain wCauA_04615 PF12826 Helix-hairpin-helix motif wCauA_04615 PF01653 NAD-dependent DNA ligase adenylation domain wCauA_04615 PF00533 BRCA1 C Terminus (BRCT) domain wCauA_04620 PF00701 Dihydrodipicolinate synthetase family wCauA_04625 PF00436 Single-strand binding protein family wCauA_04650 PF00005 ABC transporter wCauA_04650 PF00664 ABC transporter transmembrane region wCauA_04655 PF01790 Prolipoprotein diacylglyceryl transferase wCauA_04660 PF01668 SmpB protein wCauA_04680 PF00551 Formyl transferase wCauA_04690 PF05193 Peptidase M16 inactive domain wCauA_04690 PF00675 Insulinase (Peptidase family M16) wCauA_04695 PF01252 Signal peptidase (SPase) II wCauA_04700 PF01687 Riboflavin kinase wCauA_04700 PF06574 FAD synthetase wCauA_04705 PF00462 Glutaredoxin wCauA_04715 PF10417 C-terminal domain of 1-Cys peroxiredoxin wCauA_04715 PF00578 AhpC/TSA family wCauA_04720 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_04730 PF02899 Phage integrase, N-terminal SAM-like domain wCauA_04730 PF00589 Phage integrase family wCauA_04735 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_04735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain wCauA_04775 PF01926 50S ribosome-binding GTPase wCauA_04775 PF07650 KH domain wCauA_04780 PF02322 Cytochrome bd terminal oxidase subunit II wCauA_04785 PF01654 Cytochrome bd terminal oxidase subunit I wCauA_04790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain wCauA_04790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain wCauA_04795 PF05193 Peptidase M16 inactive domain wCauA_04795 PF00675 Insulinase (Peptidase family M16) wCauA_04805 PF01702 Queuine tRNA-ribosyltransferase wCauA_04825 PF00486 Transcriptional regulatory protein, C terminal wCauA_04825 PF00072 Response regulator receiver domain wCauA_04830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus wCauA_04830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus wCauA_04835 PF04608 Phosphatidylglycerophosphatase A wCauA_04850 PF13085 2Fe-2S iron-sulfur cluster binding domain wCauA_04855 PF02130 Uncharacterized protein family UPF0054 wCauA_04870 PF00091 Tubulin/FtsZ family, GTPase domain wCauA_04870 PF12327 FtsZ family, C-terminal domain wCauA_04955 PF17761 DUF1016 N-terminal domain wCauA_04955 PF06250 YhcG PDDEXK nuclease domain wCauA_05050 PF04984 Phage tail sheath protein subtilisin-like domain wCauA_05050 PF17482 Phage tail sheath C-terminal domain wCauA_05085 PF12804 MobA-like NTP transferase domain wCauA_05085 PF00132 Bacterial transferase hexapeptide (six repeats) wCauA_05085 PF14602 Hexapeptide repeat of succinyl-transferase wCauA_05090 PF01370 NAD dependent epimerase/dehydratase family wCauA_05110 PF00664 ABC transporter transmembrane region wCauA_05110 PF00005 ABC transporter wCauA_05115 PF01212 Beta-eliminating lyase wCauA_05120 PF01212 Beta-eliminating lyase wCauA_05130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain wCauA_05130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain wCauA_05130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain wCauA_05135 PF00892 EamA-like transporter family wCauA_05190 PF04002 RadC-like JAB domain wCauA_05195 PF00457 Glycosyl hydrolases family 11 wCauA_05195 PF01522 Polysaccharide deacetylase wCauA_05195 PF03422 Carbohydrate binding module (family 6) wCauA_05200 PF00905 Penicillin binding protein transpeptidase domain wCauA_05200 PF03717 Penicillin-binding Protein dimerisation domain wCauA_05230 PF14602 Hexapeptide repeat of succinyl-transferase wCauA_05230 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal wCauA_05230 PF00132 Bacterial transferase hexapeptide (six repeats) wCauA_05240 PF00834 Ribulose-phosphate 3 epimerase family wCauA_05295 PF01555 DNA methylase wCauA_05360 PF01348 Type II intron maturase wCauA_05360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) wCauA_05435 PF00011 Hsp20/alpha crystallin family wCauA_05450 PF06055 Exopolysaccharide synthesis, ExoD wCauA_05495 PF00533 BRCA1 C Terminus (BRCT) domain wCauA_05495 PF12826 Helix-hairpin-helix motif wCauA_05495 PF03120 NAD-dependent DNA ligase OB-fold domain wCauA_05495 PF01653 NAD-dependent DNA ligase adenylation domain wCauA_05500 PF13333 Integrase core domain wCauA_05500 PF00665 Integrase core domain wCauA_05500 PF13276 HTH-like domain wCauA_05510 PF01527 Transposase wCauA_05525 PF00923 Transaldolase/Fructose-6-phosphate aldolase wCauA_05535 PF07516 SecA Wing and Scaffold domain wCauA_05535 PF01043 SecA preprotein cross-linking domain wCauA_05535 PF07517 SecA DEAD-like domain wCauA_05535 PF02810 SEC-C motif wCauA_05550 PF00364 Biotin-requiring enzyme wCauA_05550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) wCauA_05550 PF02817 e3 binding domain wCauA_05555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain wCauA_05555 PF03900 Porphobilinogen deaminase, C-terminal domain wCauA_05560 PF01565 FAD binding domain wCauA_05560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain wCauA_05575 PF01380 SIS domain wCauA_05580 PF02699 Preprotein translocase subunit wCauA_05590 PF00318 Ribosomal protein S2 wCauA_05595 PF00889 Elongation factor TS wCauA_05600 PF00696 Amino acid kinase family wCauA_05605 PF01765 Ribosome recycling factor wCauA_05615 PF01255 Putative undecaprenyl diphosphate synthase wCauA_05630 PF01467 Cytidylyltransferase-like wCauA_05650 PF13276 HTH-like domain wCauA_05650 PF00665 Integrase core domain wCauA_05650 PF13333 Integrase core domain wCauA_05660 PF01527 Transposase wCauA_05675 PF00005 ABC transporter wCauA_05685 PF02938 GAD domain wCauA_05685 PF00152 tRNA synthetases class II (D, K and N) wCauA_05685 PF01336 OB-fold nucleic acid binding domain wCauA_05690 PF08946 Osmosensory transporter coiled coil wCauA_05690 PF00083 Sugar (and other) transporter wCauA_05695 PF01479 S4 domain wCauA_05695 PF00849 RNA pseudouridylate synthase wCauA_05700 PF00676 Dehydrogenase E1 component wCauA_05715 PF00919 Uncharacterized protein family UPF0004 wCauA_05715 PF01938 TRAM domain wCauA_05715 PF04055 Radical SAM superfamily wCauA_05720 PF00854 POT family wCauA_05725 PF08264 Anticodon-binding domain of tRNA wCauA_05725 PF00133 tRNA synthetases class I (I, L, M and V) wCauA_05735 PF01588 Putative tRNA binding domain wCauA_05735 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain wCauA_05735 PF03484 tRNA synthetase B5 domain wCauA_05735 PF03483 B3/4 domain wCauA_05735 PF03147 Ferredoxin-fold anticodon binding domain wCauA_05745 PF00119 ATP synthase A chain wCauA_05750 PF00137 ATP synthase subunit C wCauA_05770 PF02628 Cytochrome oxidase assembly protein wCauA_05775 PF02785 Biotin carboxylase C-terminal domain wCauA_05775 PF00289 Biotin carboxylase, N-terminal domain wCauA_05775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain wCauA_05785 PF00749 tRNA synthetases class I (E and Q), catalytic domain wCauA_05800 PF00890 FAD binding domain wCauA_05800 PF02910 Fumarate reductase flavoprotein C-term wCauA_05810 PF00625 Guanylate kinase wCauA_05835 PF01926 50S ribosome-binding GTPase wCauA_05835 PF06071 Protein of unknown function (DUF933) wCauA_05845 PF12627 Probable RNA and SrmB- binding site of polymerase A wCauA_05845 PF13735 tRNA nucleotidyltransferase domain 2 putative wCauA_05845 PF01743 Poly A polymerase head domain wCauA_05880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain wCauA_05880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain wCauA_05885 PF00902 Sec-independent protein translocase protein (TatC) wCauA_05890 PF01316 Arginine repressor, DNA binding domain wCauA_05890 PF02863 Arginine repressor, C-terminal domain wCauA_05895 PF00497 Bacterial extracellular solute-binding proteins, family 3 wCauA_05900 PF00528 Binding-protein-dependent transport system inner membrane component wCauA_05905 PF00005 ABC transporter wCauA_05925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family wCauA_05940 PF00133 tRNA synthetases class I (I, L, M and V) wCauA_05940 PF08264 Anticodon-binding domain of tRNA wCauA_05960 PF00117 Glutamine amidotransferase class-I wCauA_05960 PF06418 CTP synthase N-terminus wCauA_05965 PF14437 MafB19-like deaminase wCauA_05975 PF07690 Major Facilitator Superfamily wCauA_05975 PF00083 Sugar (and other) transporter wCauA_05980 PF17862 AAA+ lid domain wCauA_05980 PF06480 FtsH Extracellular wCauA_05980 PF00004 ATPase family associated with various cellular activities (AAA) wCauA_05980 PF01434 Peptidase family M41 wCauA_05985 PF00364 Biotin-requiring enzyme wCauA_05985 PF02780 Transketolase, C-terminal domain wCauA_05985 PF02779 Transketolase, pyrimidine binding domain wCauA_06010 PF14492 Elongation Factor G, domain II wCauA_06010 PF00009 Elongation factor Tu GTP binding domain wCauA_06010 PF03144 Elongation factor Tu domain 2 wCauA_06010 PF06421 GTP-binding protein LepA C-terminus wCauA_06010 PF00679 Elongation factor G C-terminus wCauA_06055 PF08525 Opacity-associated protein A N-terminal motif wCauA_06055 PF01476 LysM domain wCauA_06055 PF01551 Peptidase family M23 wCauA_06060 PF01709 Transcriptional regulator wCauA_06065 PF13525 Outer membrane lipoprotein wCauA_06075 PF01066 CDP-alcohol phosphatidyltransferase wCauA_06080 PF01515 Phosphate acetyl/butaryl transferase wCauA_06080 PF03949 Malic enzyme, NAD binding domain wCauA_06080 PF00390 Malic enzyme, N-terminal domain wCauA_06095 PF00462 Glutaredoxin wCauA_06100 PF00206 Lyase wCauA_06100 PF10415 Fumarase C C-terminus wCauA_06115 PF01018 GTP1/OBG wCauA_06115 PF01926 50S ribosome-binding GTPase wCauA_06120 PF03952 Enolase, N-terminal domain wCauA_06120 PF00113 Enolase, C-terminal TIM barrel domain wCauA_06125 PF01225 Mur ligase family, catalytic domain wCauA_06125 PF08245 Mur ligase middle domain wCauA_06125 PF02875 Mur ligase family, glutamate ligase domain wCauA_06130 PF03330 Lytic transglycolase wCauA_06155 PF04055 Radical SAM superfamily wCauA_06155 PF00919 Uncharacterized protein family UPF0004 wCauA_06160 PF01425 Amidase wCauA_06170 PF01527 Transposase wCauA_06185 PF01609 Transposase DDE domain wCauA_06190 PF03129 Anticodon binding domain wCauA_06190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) wCauA_06195 PF01648 4'-phosphopantetheinyl transferase superfamily wCauA_06200 PF00361 Proton-conducting membrane transporter wCauA_06200 PF13244 Domain of unknown function (DUF4040) wCauA_06200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus wCauA_06220 PF01300 Telomere recombination wCauA_06240 PF00271 Helicase conserved C-terminal domain wCauA_06240 PF17191 RecG wedge domain wCauA_06240 PF00270 DEAD/DEAH box helicase wCauA_06295 PF01145 SPFH domain / Band 7 family wCauA_06300 PF01145 SPFH domain / Band 7 family wCauA_06305 PF13180 PDZ domain wCauA_06350 PF12344 Ultra-violet resistance protein B wCauA_06350 PF02151 UvrB/uvrC motif wCauA_06350 PF04851 Type III restriction enzyme, res subunit wCauA_06350 PF00271 Helicase conserved C-terminal domain wCauA_06350 PF17757 UvrB interaction domain wCauA_06385 PF18073 Rubredoxin metal binding domain wCauA_06390 PF02881 SRP54-type protein, helical bundle domain wCauA_06390 PF00448 SRP54-type protein, GTPase domain wCauA_06395 PF01592 NifU-like N terminal domain wCauA_06400 PF01521 Iron-sulphur cluster biosynthesis wCauA_06405 PF00226 DnaJ domain wCauA_06405 PF07743 HSCB C-terminal oligomerisation domain wCauA_06410 PF00012 Hsp70 protein wCauA_06415 PF10502 Signal peptidase, peptidase S26 wCauA_06420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain wCauA_06420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain wCauA_06475 PF08245 Mur ligase middle domain wCauA_06500 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wCauA_06505 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wCauA_06510 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wCauA_06515 PF04610 TrbL/VirB6 plasmid conjugal transfer protein wCauA_06520 PF03135 CagE, TrbE, VirB family, component of type IV transporter system wCauA_06530 PF01921 tRNA synthetases class I (K) wCauA_06545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain wCauA_06545 PF01411 tRNA synthetases class II (A) wCauA_06545 PF02272 DHHA1 domain wCauA_06555 PF01632 Ribosomal protein L35 wCauA_06560 PF00453 Ribosomal protein L20 wCauA_06565 PF02911 Formyl transferase, C-terminal domain wCauA_06565 PF00551 Formyl transferase wCauA_06570 PF02142 MGS-like domain wCauA_06570 PF01808 AICARFT/IMPCHase bienzyme wCauA_06580 PF06415 BPG-independent PGAM N-terminus (iPGM_N) wCauA_06580 PF01676 Metalloenzyme superfamily wCauA_06585 PF00698 Acyl transferase domain wCauA_06590 PF01197 Ribosomal protein L31 wCauA_06595 PF01513 ATP-NAD kinase wCauA_06625 PF01138 3' exoribonuclease family, domain 1 wCauA_06625 PF03725 3' exoribonuclease family, domain 2 wCauA_06625 PF00575 S1 RNA binding domain wCauA_06625 PF00013 KH domain wCauA_06625 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain wCauA_06630 PF00312 Ribosomal protein S15 wCauA_06635 PF16198 tRNA pseudouridylate synthase B C-terminal domain wCauA_06635 PF01509 TruB family pseudouridylate synthase (N terminal domain) wCauA_06640 PF00111 2Fe-2S iron-sulfur cluster binding domain wCauA_06650 PF03918 Cytochrome C biogenesis protein wCauA_06675 PF00186 Dihydrofolate reductase wCauA_06680 PF00809 Pterin binding enzyme wCauA_06680 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) wCauA_06690 PF03070 TENA/THI-4/PQQC family wCauA_06700 PF00085 Thioredoxin wCauA_06730 PF00586 AIR synthase related protein, N-terminal domain wCauA_06730 PF02769 AIR synthase related protein, C-terminal domain wCauA_06730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain wCauA_06740 PF17760 UvrA interaction domain wCauA_06740 PF17755 UvrA DNA-binding domain wCauA_06755 PF08245 Mur ligase middle domain wCauA_06755 PF02875 Mur ligase family, glutamate ligase domain wCauA_06760 PF01053 Cys/Met metabolism PLP-dependent enzyme wCauA_06770 PF00012 Hsp70 protein wCauA_06775 PF00575 S1 RNA binding domain wCauA_06775 PF10150 Ribonuclease E/G family wCauA_06775 PF12111 Polyribonucleotide phosphorylase C terminal wCauA_06780 PF00471 Ribosomal protein L33 wCauA_06790 PF01297 Zinc-uptake complex component A periplasmic wCauA_06795 PF00005 ABC transporter wCauA_06800 PF03109 ABC1 family wCauA_06850 PF01926 50S ribosome-binding GTPase wCauA_06850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal wCauA_06865 PF01258 Prokaryotic dksA/traR C4-type zinc finger wCauA_06875 PF02390 Putative methyltransferase wCauA_06880 PF00575 S1 RNA binding domain wCauA_06885 PF00216 Bacterial DNA-binding protein wCauA_06900 PF02163 Peptidase family M50 wCauA_06900 PF17820 PDZ domain wCauA_06905 PF07244 Surface antigen variable number repeat wCauA_06905 PF01103 Surface antigen wCauA_06915 PF07977 FabA-like domain wCauA_06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase wCauA_06935 PF00448 SRP54-type protein, GTPase domain wCauA_06935 PF02881 SRP54-type protein, helical bundle domain wCauA_06935 PF02978 Signal peptide binding domain wCauA_06940 PF01975 Survival protein SurE wCauA_06945 PF13393 Histidyl-tRNA synthetase wCauA_06945 PF03129 Anticodon binding domain wCauA_06955 PF00684 DnaJ central domain wCauA_06955 PF00226 DnaJ domain wCauA_06955 PF01556 DnaJ C terminal domain wCauA_06970 PF00032 Cytochrome b(C-terminal)/b6/petD wCauA_06970 PF00033 Cytochrome b/b6/petB wCauA_06975 PF00033 Cytochrome b/b6/petB wCauA_06975 PF00032 Cytochrome b(C-terminal)/b6/petD wCauA_06975 PF02167 Cytochrome C1 family wCauA_06990 PF01416 tRNA pseudouridine synthase wCauA_06995 PF00712 DNA polymerase III beta subunit, N-terminal domain wCauA_06995 PF02767 DNA polymerase III beta subunit, central domain wCauA_06995 PF02768 DNA polymerase III beta subunit, C-terminal domain wCauA_07005 PF00140 Sigma-70 factor, region 1.2 wCauA_07005 PF04542 Sigma-70 region 2 wCauA_07005 PF04545 Sigma-70, region 4 wCauA_07010 PF13505 Outer membrane protein beta-barrel domain wCauA_07025 PF02575 YbaB/EbfC DNA-binding family wCauA_07030 PF12169 DNA polymerase III subunits gamma and tau domain III wCauA_07055 PF13462 Thioredoxin wCauA_07060 PF03364 Polyketide cyclase / dehydrase and lipid transport wCauA_07075 PF02875 Mur ligase family, glutamate ligase domain wCauA_07075 PF08245 Mur ligase middle domain wCauA_07080 PF00684 DnaJ central domain wCauA_07080 PF01556 DnaJ C terminal domain wCauA_07080 PF00226 DnaJ domain wCauA_07085 PF00154 recA bacterial DNA recombination protein wCauA_07090 PF02666 Phosphatidylserine decarboxylase wCauA_07095 PF01066 CDP-alcohol phosphatidyltransferase wCauA_07100 PF01235 Sodium:alanine symporter family wCauA_07105 PF01235 Sodium:alanine symporter family wCauA_07115 PF02660 Glycerol-3-phosphate acyltransferase wCauA_07125 PF01545 Cation efflux family wCauA_07145 PF00464 Serine hydroxymethyltransferase wCauA_07160 PF07690 Major Facilitator Superfamily wCauA_07175 PF01208 Uroporphyrinogen decarboxylase (URO-D)