WCLE_00010 PF00308 Bacterial dnaA protein WCLE_00010 PF08299 Bacterial dnaA protein helix-turn-helix WCLE_00010 PF11638 DnaA N-terminal domain WCLE_00020 PF00149 Calcineurin-like phosphoesterase WCLE_00040 PF00925 GTP cyclohydrolase II WCLE_00050 PF04335 VirB8 protein WCLE_00060 PF03524 Conjugal transfer protein WCLE_00070 PF03743 Bacterial conjugation TrbI-like protein WCLE_00080 PF00437 Type II/IV secretion system protein WCLE_00090 PF02534 Type IV secretory system Conjugative DNA transfer WCLE_001000 PF00032 Cytochrome b(C-terminal)/b6/petD WCLE_001000 PF00033 Cytochrome b(N-terminal)/b6/petB WCLE_001010 PF02167 Cytochrome C1 family WCLE_001020 PF00271 Helicase conserved C-terminal domain WCLE_001020 PF04851 Type III restriction enzyme, res subunit WCLE_001020 PF12344 Ultra-violet resistance protein B WCLE_001030 PF01546 Peptidase family M20/M25/M40 WCLE_001030 PF07687 Peptidase dimerisation domain WCLE_001040 PF13685 Iron-containing alcohol dehydrogenase WCLE_001060 PF02481 DNA recombination-mediator protein A WCLE_001070 PF00037 4Fe-4S binding domain WCLE_001070 PF11953 Domain of unknown function (DUF3470) WCLE_001080 PF01820 D-ala D-ala ligase N-terminus WCLE_001080 PF07478 D-ala D-ala ligase C-terminus WCLE_001090 PF03799 Cell division protein FtsQ WCLE_001090 PF08478 POTRA domain, FtsQ-type WCLE_00110 PF13340 WCLE_00110 WCLE_001100 PF13340 WCLE_001100 WCLE_001110 PF13586 WCLE_001110 WCLE_001120 PF01551 Peptidase family M23 WCLE_001130 PF00133 tRNA synthetases class I (I, L, M and V) WCLE_001130 PF08264 Anticodon-binding domain of tRNA WCLE_001130 PF13603 Leucyl-tRNA synthetase, Domain 2 WCLE_001140 PF00633 Helix-hairpin-helix motif WCLE_001140 PF00730 HhH-GPD superfamily base excision DNA repair protein WCLE_001140 PF10576 Iron-sulfur binding domain of endonuclease III WCLE_001150 PF00180 Isocitrate/isopropylmalate dehydrogenase WCLE_001170 PF13340 WCLE_001170 WCLE_001180 PF13586 WCLE_001180 WCLE_001190 PF13340 WCLE_001190 WCLE_00120 PF13586 WCLE_00120 WCLE_001200 PF13586 WCLE_001200 WCLE_001210 PF00171 Aldehyde dehydrogenase family WCLE_001210 PF01619 Proline dehydrogenase WCLE_001210 PF14850 DNA-binding domain of Proline dehydrogenase WCLE_001230 PF00023 Ankyrin repeat WCLE_001240 PF00890 FAD binding domain WCLE_001240 PF02910 Fumarate reductase flavoprotein C-term WCLE_001280 PF03091 CutA1 divalent ion tolerance protein WCLE_001290 PF13340 WCLE_001290 WCLE_00130 PF00072 Response regulator receiver domain WCLE_00130 PF00512 His Kinase A (phospho-acceptor) domain WCLE_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WCLE_001300 PF13586 WCLE_001300 WCLE_001330 PF01145 SPFH domain / Band 7 family WCLE_001340 PF01145 SPFH domain / Band 7 family WCLE_001350 PF13180 PDZ domain WCLE_001350 PF13365 Trypsin-like peptidase domain WCLE_001370 PF13340 WCLE_001370 WCLE_001380 PF13586 WCLE_001380 WCLE_001390 PF13637 Ankyrin repeats (many copies) WCLE_001390 PF13857 Ankyrin repeats (many copies) WCLE_00140 PF01218 Coproporphyrinogen III oxidase WCLE_001400 PF12796 Ankyrin repeats (3 copies) WCLE_001410 PF12796 Ankyrin repeats (3 copies) WCLE_001420 PF00133 tRNA synthetases class I (I, L, M and V) WCLE_001420 PF09334 tRNA synthetases class I (M) WCLE_001440 PF00772 DnaB-like helicase N terminal domain WCLE_001440 PF03796 DnaB-like helicase C terminal domain WCLE_001460 PF06271 WCLE_001460 WCLE_001470 PF00580 UvrD/REP helicase N-terminal domain WCLE_001470 PF13361 UvrD-like helicase C-terminal domain WCLE_001480 PF00288 GHMP kinases N terminal domain WCLE_001480 PF08544 GHMP kinases C terminal WCLE_001490 PF04430 Protein of unknown function (DUF498/DUF598) WCLE_00150 PF00330 Aconitase family (aconitate hydratase) WCLE_00150 PF00694 Aconitase C-terminal domain WCLE_001500 PF00950 WCLE_001500 WCLE_001520 PF00692 dUTPase WCLE_001540 PF03023 WCLE_001540 WCLE_001550 PF13502 WCLE_001550 WCLE_001560 PF01609 Transposase DDE domain WCLE_001570 PF13340 WCLE_001570 WCLE_001590 PF13091 PLD-like domain WCLE_001620 PF02091 Glycyl-tRNA synthetase alpha subunit WCLE_001630 PF02092 WCLE_001630 WCLE_001630 PF05746 DALR anticodon binding domain WCLE_001640 PF01541 GIY-YIG catalytic domain WCLE_001640 PF02151 UvrB/uvrC motif WCLE_001640 PF08459 UvrC Helix-hairpin-helix N-terminal WCLE_001640 PF12826 Helix-hairpin-helix motif WCLE_001650 PF06250 WCLE_001650 WCLE_001660 PF13340 WCLE_001660 WCLE_001670 PF01609 Transposase DDE domain WCLE_00170 PF00226 DnaJ domain WCLE_00170 PF12796 Ankyrin repeats (3 copies) WCLE_001710 PF01609 Transposase DDE domain WCLE_001720 PF13340 WCLE_001720 WCLE_001730 PF00490 Delta-aminolevulinic acid dehydratase WCLE_001740 PF13340 WCLE_001740 WCLE_001750 PF13586 WCLE_001750 WCLE_001760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WCLE_001770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WCLE_001780 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_001780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WCLE_001780 PF06455 WCLE_001780 WCLE_001790 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_00180 PF00270 DEAD/DEAH box helicase WCLE_00180 PF00271 Helicase conserved C-terminal domain WCLE_00180 PF17191 WCLE_00180 WCLE_001800 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_001810 PF02237 Biotin protein ligase C terminal domain WCLE_001810 PF03099 Biotin/lipoate A/B protein ligase family WCLE_001830 PF03100 CcmE WCLE_001840 PF00005 ABC transporter WCLE_001850 PF02405 WCLE_001850 WCLE_001870 PF07508 Recombinase WCLE_001870 PF13408 Recombinase zinc beta ribbon domain WCLE_001880 PF01609 Transposase DDE domain WCLE_001890 PF13340 WCLE_001890 WCLE_00190 PF13586 WCLE_00190 WCLE_001910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WCLE_001910 PF03900 Porphobilinogen deaminase, C-terminal domain WCLE_001920 PF01565 FAD binding domain WCLE_001920 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WCLE_001940 PF04551 GcpE protein WCLE_001950 PF02565 Recombination protein O C terminal WCLE_001950 PF11967 Recombination protein O N terminal WCLE_001960 PF00164 Ribosomal protein S12/S23 WCLE_001970 PF00177 Ribosomal protein S7p/S5e WCLE_001980 PF00009 Elongation factor Tu GTP binding domain WCLE_001980 PF00679 Elongation factor G C-terminus WCLE_001980 PF03144 Elongation factor Tu domain 2 WCLE_001980 PF03764 Elongation factor G, domain IV WCLE_001980 PF14492 Elongation Factor G, domain II WCLE_001990 PF00009 Elongation factor Tu GTP binding domain WCLE_001990 PF03143 Elongation factor Tu C-terminal domain WCLE_001990 PF03144 Elongation factor Tu domain 2 WCLE_00200 PF13340 WCLE_00200 WCLE_002000 PF00338 Ribosomal protein S10p/S20e WCLE_002010 PF00297 Ribosomal protein L3 WCLE_002020 PF00573 Ribosomal protein L4/L1 family WCLE_002030 PF00276 Ribosomal protein L23 WCLE_002040 PF00181 Ribosomal Proteins L2, RNA binding domain WCLE_002040 PF03947 Ribosomal Proteins L2, C-terminal domain WCLE_002050 PF00203 Ribosomal protein S19 WCLE_002060 PF00237 Ribosomal protein L22p/L17e WCLE_002070 PF00189 Ribosomal protein S3, C-terminal domain WCLE_002070 PF07650 KH domain WCLE_002080 PF00252 Ribosomal protein L16p/L10e WCLE_002090 PF00831 Ribosomal L29 protein WCLE_002100 PF00366 Ribosomal protein S17 WCLE_002110 PF00238 Ribosomal protein L14p/L23e WCLE_002120 PF17136 WCLE_002120 WCLE_002130 PF00281 Ribosomal protein L5 WCLE_002130 PF00673 ribosomal L5P family C-terminus WCLE_002140 PF00253 Ribosomal protein S14p/S29e WCLE_002150 PF00410 Ribosomal protein S8 WCLE_002160 PF00347 Ribosomal protein L6 WCLE_002170 PF00861 Ribosomal L18p/L5e family WCLE_002180 PF00333 Ribosomal protein S5, N-terminal domain WCLE_002180 PF03719 Ribosomal protein S5, C-terminal domain WCLE_002190 PF00828 Ribosomal protein L18e/L15 WCLE_00220 PF00140 Sigma-70 factor, region 1 WCLE_00220 PF04542 Sigma-70 region 2 WCLE_00220 PF04545 Sigma-70, region 4 WCLE_002200 PF00344 SecY translocase WCLE_002210 PF00406 Adenylate kinase WCLE_002220 PF00416 Ribosomal protein S13/S18 WCLE_002230 PF00411 Ribosomal protein S11 WCLE_002240 PF01000 RNA polymerase Rpb3/RpoA insert domain WCLE_002240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WCLE_002240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WCLE_002250 PF01196 Ribosomal protein L17 WCLE_002260 PF02021 Uncharacterised protein family UPF0102 WCLE_002270 PF12849 PBP superfamily domain WCLE_002280 PF13340 WCLE_002280 WCLE_002290 PF01609 Transposase DDE domain WCLE_00230 PF01617 WCLE_00230 WCLE_002320 PF13586 WCLE_002320 WCLE_002330 PF13340 WCLE_002330 WCLE_002360 PF13340 WCLE_002360 WCLE_002370 PF13586 WCLE_002370 WCLE_002380 PF13586 WCLE_002380 WCLE_002390 PF13340 WCLE_002390 WCLE_00240 PF02575 YbaB/EbfC DNA-binding family WCLE_002410 PF00476 DNA polymerase family A WCLE_002410 PF01367 5'-3' exonuclease, C-terminal SAM fold WCLE_002410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WCLE_002440 PF00115 Cytochrome C and Quinol oxidase polypeptide I WCLE_002450 PF02491 SHS2 domain inserted in FTSA WCLE_002450 PF14450 Cell division protein FtsA WCLE_002460 PF01327 Polypeptide deformylase WCLE_002470 PF03167 Uracil DNA glycosylase superfamily WCLE_002490 PF07690 Major Facilitator Superfamily WCLE_00250 PF12169 DNA polymerase III subunits gamma and tau domain III WCLE_00250 PF12362 WCLE_00250 WCLE_00250 PF13177 DNA polymerase III, delta subunit WCLE_002510 PF14437 WCLE_002510 WCLE_002520 PF00117 Glutamine amidotransferase class-I WCLE_002520 PF06418 CTP synthase N-terminus WCLE_002530 PF03840 Preprotein translocase SecG subunit WCLE_002540 PF04002 RadC-like JAB domain WCLE_002550 PF13586 WCLE_002550 WCLE_002560 PF13340 WCLE_002560 WCLE_002580 PF02779 Transketolase, pyrimidine binding domain WCLE_002580 PF02780 Transketolase, C-terminal domain WCLE_002590 PF00571 CBS domain WCLE_002590 PF01769 Divalent cation transporter WCLE_002590 PF03448 MgtE intracellular N domain WCLE_00260 PF00043 Glutathione S-transferase, C-terminal domain WCLE_00260 PF13417 Glutathione S-transferase, N-terminal domain WCLE_002600 PF00472 RF-1 domain WCLE_002600 PF03462 PCRF domain WCLE_002610 PF12796 Ankyrin repeats (3 copies) WCLE_002620 PF13586 WCLE_002620 WCLE_002630 PF13340 WCLE_002630 WCLE_002640 PF08543 Phosphomethylpyrimidine kinase WCLE_002650 PF03070 TENA/THI-4/PQQC family WCLE_002660 PF00023 Ankyrin repeat WCLE_002660 PF12796 Ankyrin repeats (3 copies) WCLE_002670 PF00023 Ankyrin repeat WCLE_002670 PF12796 Ankyrin repeats (3 copies) WCLE_002690 PF00578 AhpC/TSA family WCLE_002690 PF10417 C-terminal domain of 1-Cys peroxiredoxin WCLE_00270 PF01596 O-methyltransferase WCLE_002700 PF07992 Pyridine nucleotide-disulphide oxidoreductase WCLE_002710 PF00023 Ankyrin repeat WCLE_002720 PF00589 Phage integrase family WCLE_002720 PF02899 Phage integrase, N-terminal SAM-like domain WCLE_002730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WCLE_002730 PF07992 Pyridine nucleotide-disulphide oxidoreductase WCLE_002740 PF13360 PQQ-like domain WCLE_002750 PF00204 DNA gyrase B WCLE_002750 PF00986 DNA gyrase B subunit, carboxyl terminus WCLE_002750 PF01751 Toprim domain WCLE_002750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WCLE_002760 PF13586 WCLE_002760 WCLE_002770 PF13340 WCLE_002770 WCLE_002790 PF13586 WCLE_002790 WCLE_002800 PF13340 WCLE_002800 WCLE_002840 PF09356 WCLE_002840 WCLE_002840 PF09931 WCLE_002840 WCLE_002850 PF13609 Gram-negative porin WCLE_002870 PF01764 Lipase (class 3) WCLE_002880 PF01609 Transposase DDE domain WCLE_002890 PF13340 WCLE_002890 WCLE_00290 PF13462 Thioredoxin WCLE_002900 PF13586 WCLE_002900 WCLE_002910 PF13340 WCLE_002910 WCLE_002930 PF13609 Gram-negative porin WCLE_002940 PF00375 Sodium:dicarboxylate symporter family WCLE_002950 PF00814 Glycoprotease family WCLE_002960 PF00596 Class II Aldolase and Adducin N-terminal domain WCLE_002970 PF13586 WCLE_002970 WCLE_002980 PF13340 WCLE_002980 WCLE_002990 PF00009 Elongation factor Tu GTP binding domain WCLE_002990 PF00679 Elongation factor G C-terminus WCLE_002990 PF03144 Elongation factor Tu domain 2 WCLE_00300 PF05494 Toluene tolerance, Ttg2 WCLE_003000 PF12784 WCLE_003000 WCLE_003010 PF01883 Domain of unknown function DUF59 WCLE_003010 PF10609 ParA/MinD ATPase like WCLE_003020 PF01494 FAD binding domain WCLE_003030 PF13340 WCLE_003030 WCLE_003050 PF01609 Transposase DDE domain WCLE_003060 PF00588 SpoU rRNA Methylase family WCLE_003060 PF08032 RNA 2'-O ribose methyltransferase substrate binding WCLE_003070 PF01027 Inhibitor of apoptosis-promoting Bax1 WCLE_003080 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WCLE_00310 PF00696 Amino acid kinase family WCLE_00310 PF13840 ACT domain WCLE_003100 PF02875 Mur ligase family, glutamate ligase domain WCLE_003100 PF08245 Mur ligase middle domain WCLE_003110 PF01053 Cys/Met metabolism PLP-dependent enzyme WCLE_003120 PF01722 BolA-like protein WCLE_003130 PF00012 Hsp70 protein WCLE_003140 PF00575 S1 RNA binding domain WCLE_003140 PF10150 Ribonuclease E/G family WCLE_003150 PF00471 Ribosomal protein L33 WCLE_003160 PF13744 Helix-turn-helix domain WCLE_003180 PF05258 WCLE_003180 WCLE_003190 PF00830 Ribosomal L28 family WCLE_00320 PF01594 WCLE_00320 WCLE_003200 PF04055 Radical SAM superfamily WCLE_003220 PF00768 D-alanyl-D-alanine carboxypeptidase WCLE_003220 PF07943 Penicillin-binding protein 5, C-terminal domain WCLE_003230 PF04586 WCLE_003230 WCLE_003250 PF01743 Poly A polymerase head domain WCLE_003250 PF12627 Probable RNA and SrmB- binding site of polymerase A WCLE_003260 PF02338 OTU-like cysteine protease WCLE_003270 PF01926 50S ribosome-binding GTPase WCLE_003270 PF06071 Protein of unknown function (DUF933) WCLE_003290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WCLE_00330 PF00308 Bacterial dnaA protein WCLE_003320 PF13586 WCLE_003320 WCLE_003350 PF00391 PEP-utilising enzyme, mobile domain WCLE_003350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WCLE_003350 PF02896 PEP-utilising enzyme, TIM barrel domain WCLE_003380 PF01807 CHC2 zinc finger WCLE_003380 PF08275 DNA primase catalytic core, N-terminal domain WCLE_003380 PF13662 Toprim domain WCLE_003390 PF02502 Ribose/Galactose Isomerase WCLE_003390 PF13489 Methyltransferase domain WCLE_00340 PF00589 Phage integrase family WCLE_00340 PF02899 Phage integrase, N-terminal SAM-like domain WCLE_003400 PF13340 WCLE_003400 WCLE_003410 PF13586 WCLE_003410 WCLE_003420 PF00849 RNA pseudouridylate synthase WCLE_003440 PF13586 WCLE_003440 WCLE_003450 PF13340 WCLE_003450 WCLE_003460 PF13340 WCLE_003460 WCLE_003470 PF13586 WCLE_003470 WCLE_00350 PF01553 Acyltransferase WCLE_003500 PF13586 WCLE_003500 WCLE_003510 PF13340 WCLE_003510 WCLE_003520 PF00483 Nucleotidyl transferase WCLE_003540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WCLE_003550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WCLE_003580 PF02142 MGS-like domain WCLE_003580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WCLE_003580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WCLE_003590 PF01609 Transposase DDE domain WCLE_00360 PF01649 Ribosomal protein S20 WCLE_003610 PF13340 WCLE_003610 WCLE_003620 PF12705 PD-(D/E)XK nuclease superfamily WCLE_003630 PF00586 AIR synthase related protein, N-terminal domain WCLE_003630 PF02769 AIR synthase related protein, C-terminal domain WCLE_003670 PF00035 Double-stranded RNA binding motif WCLE_003670 PF14622 Ribonuclease-III-like WCLE_003680 PF01180 Dihydroorotate dehydrogenase WCLE_00370 PF00285 Citrate synthase WCLE_003700 PF01039 Carboxyl transferase domain WCLE_003710 PF12784 WCLE_003710 WCLE_003740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WCLE_003740 PF06827 Zinc finger found in FPG and IleRS WCLE_003740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WCLE_003750 PF01243 Pyridoxamine 5'-phosphate oxidase WCLE_003750 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WCLE_003770 PF01134 Glucose inhibited division protein A WCLE_003770 PF13932 GidA associated domain 3 WCLE_003780 PF00557 Metallopeptidase family M24 WCLE_003780 PF01321 Creatinase/Prolidase N-terminal domain WCLE_003780 PF16188 WCLE_003780 WCLE_003780 PF16189 WCLE_003780 WCLE_00380 PF00072 Response regulator receiver domain WCLE_00380 PF00486 Transcriptional regulatory protein, C terminal WCLE_003800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WCLE_003800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WCLE_003810 PF02504 Fatty acid synthesis protein WCLE_003820 PF01783 Ribosomal L32p protein family WCLE_003830 PF13340 WCLE_003830 WCLE_003840 PF13586 WCLE_003840 WCLE_003850 PF01609 Transposase DDE domain WCLE_003860 PF13340 WCLE_003860 WCLE_003870 PF13586 WCLE_003870 WCLE_003880 PF01548 WCLE_003880 WCLE_003890 PF02371 WCLE_003890 WCLE_00390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WCLE_00390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WCLE_003900 PF05016 Plasmid stabilisation system protein WCLE_003920 PF01588 Putative tRNA binding domain WCLE_003920 PF03147 Ferredoxin-fold anticodon binding domain WCLE_003920 PF03483 B3/4 domain WCLE_003920 PF03484 tRNA synthetase B5 domain WCLE_003940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WCLE_003940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WCLE_003950 PF00902 Sec-independent protein translocase protein (TatC) WCLE_003980 PF05016 Plasmid stabilisation system protein WCLE_003990 PF13340 WCLE_003990 WCLE_00400 PF04608 Phosphatidylglycerophosphatase A WCLE_004000 PF13586 WCLE_004000 WCLE_004050 PF03631 WCLE_004050 WCLE_004060 PF00106 short chain dehydrogenase WCLE_004070 PF00009 Elongation factor Tu GTP binding domain WCLE_004070 PF00679 Elongation factor G C-terminus WCLE_004070 PF03144 Elongation factor Tu domain 2 WCLE_004070 PF06421 GTP-binding protein LepA C-terminus WCLE_004070 PF14492 Elongation Factor G, domain II WCLE_004080 PF05292 Malonyl-CoA decarboxylase (MCD) WCLE_004080 PF17408 WCLE_004080 WCLE_00410 PF00583 Acetyltransferase (GNAT) family WCLE_004100 PF13340 WCLE_004100 WCLE_004110 PF13586 WCLE_004110 WCLE_004130 PF01292 Prokaryotic cytochrome b561 WCLE_004140 PF03060 Nitronate monooxygenase WCLE_004170 PF03135 WCLE_004170 WCLE_004200 PF06347 Bacterial SH3 domain WCLE_004220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WCLE_004220 PF00364 Biotin-requiring enzyme WCLE_004220 PF02817 e3 binding domain WCLE_004240 PF13586 WCLE_004240 WCLE_004260 PF00202 Aminotransferase class-III WCLE_004270 PF00571 CBS domain WCLE_004270 PF01595 WCLE_004270 WCLE_004270 PF03471 Transporter associated domain WCLE_004280 PF10073 WCLE_004280 WCLE_004290 PF02441 Flavoprotein WCLE_00430 PF01609 Transposase DDE domain WCLE_004300 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WCLE_004300 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WCLE_004310 PF01522 Polysaccharide deacetylase WCLE_004320 PF07690 Major Facilitator Superfamily WCLE_004340 PF01609 Transposase DDE domain WCLE_004350 PF13340 WCLE_004350 WCLE_004370 PF13340 WCLE_004370 WCLE_004380 PF01609 Transposase DDE domain WCLE_004410 PF05016 Plasmid stabilisation system protein WCLE_004420 PF13340 WCLE_004420 WCLE_004430 PF01609 Transposase DDE domain WCLE_004440 PF01609 Transposase DDE domain WCLE_004450 PF13340 WCLE_004450 WCLE_00450 PF13340 WCLE_00450 WCLE_004510 PF05016 Plasmid stabilisation system protein WCLE_004530 PF05016 Plasmid stabilisation system protein WCLE_004570 PF13340 WCLE_004570 WCLE_004580 PF13586 WCLE_004580 WCLE_00460 PF01609 Transposase DDE domain WCLE_004610 PF13109 WCLE_004610 WCLE_004610 PF13116 WCLE_004610 WCLE_004620 PF00075 RNase H WCLE_004630 PF01040 UbiA prenyltransferase family WCLE_004640 PF00115 Cytochrome C and Quinol oxidase polypeptide I WCLE_004650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WCLE_004650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WCLE_004660 PF13437 HlyD family secretion protein WCLE_004670 PF13561 Enoyl-(Acyl carrier protein) reductase WCLE_004680 PF04956 WCLE_004680 WCLE_004690 PF01435 Peptidase family M48 WCLE_00470 PF13340 WCLE_00470 WCLE_004700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WCLE_004710 PF01272 Transcription elongation factor, GreA/GreB, C-term WCLE_004710 PF03449 Transcription elongation factor, N-terminal WCLE_004720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WCLE_004720 PF00306 ATP synthase alpha/beta chain, C terminal domain WCLE_004720 PF02874 ATP synthase alpha/beta family, beta-barrel domain WCLE_004730 PF00213 ATP synthase delta (OSCP) subunit WCLE_004740 PF04956 WCLE_004740 WCLE_004750 PF00226 DnaJ domain WCLE_004750 PF00684 DnaJ central domain WCLE_004750 PF01556 DnaJ C terminal domain WCLE_004770 PF04956 WCLE_004770 WCLE_004780 PF13525 Outer membrane lipoprotein WCLE_004790 PF01709 Transcriptional regulator WCLE_00480 PF13085 2Fe-2S iron-sulfur cluster binding domain WCLE_00480 PF13534 4Fe-4S dicluster domain WCLE_004800 PF01551 Peptidase family M23 WCLE_004810 PF01145 SPFH domain / Band 7 family WCLE_004830 PF00023 Ankyrin repeat WCLE_004830 PF12796 Ankyrin repeats (3 copies) WCLE_004830 PF13857 Ankyrin repeats (many copies) WCLE_004850 PF05135 Phage gp6-like head-tail connector protein WCLE_004860 PF06199 WCLE_004860 WCLE_004880 PF02646 WCLE_004880 WCLE_00490 PF02130 Uncharacterized protein family UPF0054 WCLE_004900 PF01609 Transposase DDE domain WCLE_004910 PF13340 WCLE_004910 WCLE_004920 PF13586 WCLE_004920 WCLE_004930 PF01609 Transposase DDE domain WCLE_004940 PF13340 WCLE_004940 WCLE_004950 PF12784 WCLE_004950 WCLE_004970 PF13586 WCLE_004970 WCLE_004980 PF13586 WCLE_004980 WCLE_004990 PF01545 Cation efflux family WCLE_00500 PF01878 EVE domain WCLE_005010 PF12784 WCLE_005010 WCLE_005020 PF00953 Glycosyl transferase family 4 WCLE_005020 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WCLE_005030 PF01351 Ribonuclease HII WCLE_005040 PF02630 SCO1/SenC WCLE_005050 PF00929 Exonuclease WCLE_005060 PF04280 Tim44-like domain WCLE_005070 PF02556 Preprotein translocase subunit SecB WCLE_005080 PF01165 Ribosomal protein S21 WCLE_005090 PF00549 CoA-ligase WCLE_005090 PF08442 ATP-grasp domain WCLE_00510 PF00091 Tubulin/FtsZ family, GTPase domain WCLE_00510 PF12327 FtsZ family, C-terminal domain WCLE_005100 PF00549 CoA-ligase WCLE_005100 PF02629 CoA binding domain WCLE_005110 PF01678 Diaminopimelate epimerase WCLE_005120 PF02632 BioY family WCLE_005130 PF06935 WCLE_005130 WCLE_005140 PF12796 Ankyrin repeats (3 copies) WCLE_005150 PF13340 WCLE_005150 WCLE_005160 PF13586 WCLE_005160 WCLE_005170 PF12796 Ankyrin repeats (3 copies) WCLE_005190 PF05088 WCLE_005190 WCLE_00520 PF01078 Magnesium chelatase, subunit ChlI WCLE_00520 PF13335 WCLE_00520 WCLE_00520 PF13541 Subunit ChlI of Mg-chelatase WCLE_005200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WCLE_005210 PF01975 Survival protein SurE WCLE_005220 PF00533 BRCA1 C Terminus (BRCT) domain WCLE_005220 PF01653 NAD-dependent DNA ligase adenylation domain WCLE_005220 PF03120 NAD-dependent DNA ligase OB-fold domain WCLE_005230 PF02075 Crossover junction endodeoxyribonuclease RuvC WCLE_005240 PF00510 Cytochrome c oxidase subunit III WCLE_005250 PF03070 TENA/THI-4/PQQC family WCLE_005260 PF13340 WCLE_005260 WCLE_005270 PF13586 WCLE_005270 WCLE_005280 PF00270 DEAD/DEAH box helicase WCLE_005280 PF00271 Helicase conserved C-terminal domain WCLE_005290 PF13606 Ankyrin repeat WCLE_00530 PF00004 ATPase family associated with various cellular activities (AAA) WCLE_00530 PF02861 Clp amino terminal domain WCLE_00530 PF07724 AAA domain (Cdc48 subfamily) WCLE_00530 PF10431 C-terminal, D2-small domain, of ClpB protein WCLE_005300 PF03129 Anticodon binding domain WCLE_005300 PF13393 Histidyl-tRNA synthetase WCLE_005310 PF01106 NifU-like domain WCLE_005310 PF08712 Scaffold protein Nfu/NifU N terminal WCLE_005320 PF00226 DnaJ domain WCLE_005330 PF00579 tRNA synthetases class I (W and Y) WCLE_005340 PF02410 Oligomerisation domain WCLE_005350 PF13238 AAA domain WCLE_005360 PF00293 NUDIX domain WCLE_005370 PF01026 TatD related DNase WCLE_005380 PF00056 lactate/malate dehydrogenase, NAD binding domain WCLE_005380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WCLE_005390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WCLE_00540 PF12784 WCLE_00540 WCLE_005400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WCLE_005410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WCLE_005420 PF01230 HIT domain WCLE_005440 PF01225 Mur ligase family, catalytic domain WCLE_005440 PF02875 Mur ligase family, glutamate ligase domain WCLE_005440 PF08245 Mur ligase middle domain WCLE_005450 PF13586 WCLE_005450 WCLE_005460 PF13340 WCLE_005460 WCLE_005480 PF00005 ABC transporter WCLE_005490 PF02416 mttA/Hcf106 family WCLE_00550 PF00478 IMP dehydrogenase / GMP reductase domain WCLE_00550 PF00571 CBS domain WCLE_005500 PF06055 WCLE_005500 WCLE_005510 PF01406 tRNA synthetases class I (C) catalytic domain WCLE_005510 PF09190 DALR domain WCLE_005520 PF14436 WCLE_005520 WCLE_005530 PF00162 Phosphoglycerate kinase WCLE_005540 PF07992 Pyridine nucleotide-disulphide oxidoreductase WCLE_005550 PF13586 WCLE_005550 WCLE_005560 PF13340 WCLE_005560 WCLE_005570 PF00472 RF-1 domain WCLE_005570 PF03462 PCRF domain WCLE_005580 PF01926 50S ribosome-binding GTPase WCLE_005590 PF00696 Amino acid kinase family WCLE_00560 PF13176 Tetratricopeptide repeat WCLE_00560 PF13181 Tetratricopeptide repeat WCLE_00560 PF14559 Tetratricopeptide repeat WCLE_005600 PF00266 Aminotransferase class-V WCLE_005620 PF13340 WCLE_005620 WCLE_005630 PF01609 Transposase DDE domain WCLE_005640 PF00749 tRNA synthetases class I (E and Q), catalytic domain WCLE_005660 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WCLE_005660 PF00364 Biotin-requiring enzyme WCLE_005660 PF02785 Biotin carboxylase C-terminal domain WCLE_005660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WCLE_005670 PF02628 WCLE_005670 WCLE_005690 PF00430 ATP synthase B/B' CF(0) WCLE_00570 PF13855 Leucine rich repeat WCLE_005700 PF00137 ATP synthase subunit C WCLE_005710 PF00119 ATP synthase A chain WCLE_005730 PF00398 Ribosomal RNA adenine dimethylase WCLE_005750 PF00121 Triosephosphate isomerase WCLE_005760 PF13340 WCLE_005760 WCLE_005770 PF13586 WCLE_005770 WCLE_005780 PF13340 WCLE_005780 WCLE_005790 PF03918 Cytochrome C biogenesis protein WCLE_005810 PF00111 2Fe-2S iron-sulfur cluster binding domain WCLE_005820 PF08245 Mur ligase middle domain WCLE_005830 PF08511 COQ9 WCLE_005850 PF03602 Conserved hypothetical protein 95 WCLE_005860 PF12796 Ankyrin repeats (3 copies) WCLE_005870 PF01609 Transposase DDE domain WCLE_005880 PF13340 WCLE_005880 WCLE_005890 PF13340 WCLE_005890 WCLE_00590 PF00226 DnaJ domain WCLE_00590 PF13637 Ankyrin repeats (many copies) WCLE_005900 PF13586 WCLE_005900 WCLE_005910 PF01555 DNA methylase WCLE_005930 PF01368 DHH family WCLE_005930 PF02272 DHHA1 domain WCLE_005950 PF00034 Cytochrome c WCLE_005960 PF00561 alpha/beta hydrolase fold WCLE_005970 PF00206 Lyase WCLE_005970 PF10415 Fumarase C C-terminus WCLE_005990 PF00923 Transaldolase WCLE_00600 PF02355 Protein export membrane protein WCLE_00600 PF07549 SecD/SecF GG Motif WCLE_006010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WCLE_006020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WCLE_006020 PF02874 ATP synthase alpha/beta family, beta-barrel domain WCLE_006030 PF00528 Binding-protein-dependent transport system inner membrane component WCLE_006040 PF00468 Ribosomal protein L34 WCLE_006050 PF00825 Ribonuclease P WCLE_006090 PF07719 Tetratricopeptide repeat WCLE_006090 PF13847 Methyltransferase domain WCLE_00610 PF00375 Sodium:dicarboxylate symporter family WCLE_006100 PF00317 Ribonucleotide reductase, all-alpha domain WCLE_006100 PF02867 Ribonucleotide reductase, barrel domain WCLE_006110 PF03652 Uncharacterised protein family (UPF0081) WCLE_006130 PF02660 WCLE_006130 WCLE_006140 PF01235 WCLE_006140 WCLE_006150 PF01066 CDP-alcohol phosphatidyltransferase WCLE_006150 PF08009 WCLE_006150 WCLE_006160 PF02666 WCLE_006160 WCLE_006170 PF00154 recA bacterial DNA recombination protein WCLE_006180 PF01195 Peptidyl-tRNA hydrolase WCLE_006190 PF01386 Ribosomal L25p family WCLE_006190 PF14693 Ribosomal protein TL5, C-terminal domain WCLE_00620 PF00156 Phosphoribosyl transferase domain WCLE_006200 PF01979 Amidohydrolase family WCLE_006210 PF13624 SurA N-terminal domain WCLE_006220 PF01926 50S ribosome-binding GTPase WCLE_006220 PF10396 GTP-binding protein TrmE N-terminus WCLE_006220 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE WCLE_006250 PF13340 WCLE_006250 WCLE_006260 PF01609 Transposase DDE domain WCLE_006270 PF12796 Ankyrin repeats (3 copies) WCLE_006280 PF00829 Ribosomal prokaryotic L21 protein WCLE_006290 PF01016 Ribosomal L27 protein WCLE_00630 PF12784 WCLE_00630 WCLE_006310 PF13586 WCLE_006310 WCLE_006320 PF13340 WCLE_006320 WCLE_006330 PF02511 Thymidylate synthase complementing protein WCLE_006340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WCLE_006350 PF00155 Aminotransferase class I and II WCLE_006370 PF07690 Major Facilitator Superfamily WCLE_006380 PF00464 Serine hydroxymethyltransferase WCLE_00640 PF01609 Transposase DDE domain WCLE_006410 PF13340 WCLE_006410 WCLE_006420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WCLE_006420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WCLE_006430 PF00675 Insulinase (Peptidase family M16) WCLE_006430 PF05193 Peptidase M16 inactive domain WCLE_006440 PF00005 ABC transporter WCLE_006440 PF00664 ABC transporter transmembrane region WCLE_006450 PF00462 Glutaredoxin WCLE_006460 PF01722 BolA-like protein WCLE_006470 PF00390 Malic enzyme, N-terminal domain WCLE_006470 PF03949 Malic enzyme, NAD binding domain WCLE_006480 PF01066 CDP-alcohol phosphatidyltransferase WCLE_00650 PF13340 WCLE_00650 WCLE_006500 PF01580 FtsK/SpoIIIE family WCLE_006500 PF09397 Ftsk gamma domain WCLE_006500 PF13491 WCLE_006500 WCLE_006510 PF04386 Stringent starvation protein B WCLE_006530 PF01208 Uroporphyrinogen decarboxylase (URO-D) WCLE_006540 PF00571 CBS domain WCLE_006540 PF03471 Transporter associated domain WCLE_006560 PF00586 AIR synthase related protein, N-terminal domain WCLE_006560 PF02769 AIR synthase related protein, C-terminal domain WCLE_006570 PF01259 SAICAR synthetase WCLE_006580 PF01746 tRNA (Guanine-1)-methyltransferase WCLE_006590 PF01245 Ribosomal protein L19 WCLE_00660 PF03524 Conjugal transfer protein WCLE_006600 PF00528 Binding-protein-dependent transport system inner membrane component WCLE_006600 PF11812 WCLE_006600 WCLE_006610 PF13507 CobB/CobQ-like glutamine amidotransferase domain WCLE_006640 PF13516 Leucine Rich repeat WCLE_006650 PF01609 Transposase DDE domain WCLE_006660 PF13340 WCLE_006660 WCLE_006680 PF00749 tRNA synthetases class I (E and Q), catalytic domain WCLE_00670 PF01258 Prokaryotic dksA/traR C4-type zinc finger WCLE_006700 PF13717 WCLE_006700 WCLE_006710 PF00132 Bacterial transferase hexapeptide (six repeats) WCLE_006710 PF14602 Hexapeptide repeat of succinyl-transferase WCLE_006710 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WCLE_006720 PF11020 WCLE_006720 WCLE_006740 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase WCLE_006750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WCLE_006750 PF10531 SLBB domain WCLE_006750 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WCLE_006770 PF00753 Metallo-beta-lactamase superfamily WCLE_006770 PF07521 RNA-metabolising metallo-beta-lactamase WCLE_006780 PF07676 WD40-like Beta Propeller Repeat WCLE_006790 PF12796 Ankyrin repeats (3 copies) WCLE_006790 PF13637 Ankyrin repeats (many copies) WCLE_00680 PF03379 WCLE_00680 WCLE_006810 PF01795 MraW methylase family WCLE_006820 PF00083 Sugar (and other) transporter WCLE_006840 PF13586 WCLE_006840 WCLE_006850 PF13340 WCLE_006850 WCLE_006860 PF01176 Translation initiation factor 1A / IF-1 WCLE_006870 PF02545 Maf-like protein WCLE_006880 PF13340 WCLE_006880 WCLE_006890 PF01609 Transposase DDE domain WCLE_00690 PF01728 FtsJ-like methyltransferase WCLE_006900 PF07508 Recombinase WCLE_006900 PF13408 Recombinase zinc beta ribbon domain WCLE_006920 PF13586 WCLE_006920 WCLE_006930 PF13340 WCLE_006930 WCLE_006940 PF00448 SRP54-type protein, GTPase domain WCLE_006940 PF02881 SRP54-type protein, helical bundle domain WCLE_006940 PF02978 Signal peptide binding domain WCLE_006950 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_006970 PF13340 WCLE_006970 WCLE_006980 PF13586 WCLE_006980 WCLE_00700 PF10691 WCLE_00700 WCLE_007000 PF12796 Ankyrin repeats (3 copies) WCLE_007010 PF00892 EamA-like transporter family WCLE_007020 PF13340 WCLE_007020 WCLE_007030 PF01609 Transposase DDE domain WCLE_007040 PF01235 WCLE_007040 WCLE_007050 PF11412 Disulphide bond corrector protein DsbC WCLE_007060 PF00118 TCP-1/cpn60 chaperonin family WCLE_007070 PF00166 Chaperonin 10 Kd subunit WCLE_007080 PF01571 Aminomethyltransferase folate-binding domain WCLE_007080 PF08669 Glycine cleavage T-protein C-terminal barrel domain WCLE_00710 PF02321 Outer membrane efflux protein WCLE_007100 PF01098 WCLE_007100 WCLE_007110 PF01209 ubiE/COQ5 methyltransferase family WCLE_007120 PF05016 Plasmid stabilisation system protein WCLE_007130 PF07690 Major Facilitator Superfamily WCLE_007140 PF00456 Transketolase, thiamine diphosphate binding domain WCLE_007140 PF02779 Transketolase, pyrimidine binding domain WCLE_007140 PF02780 Transketolase, C-terminal domain WCLE_007150 PF00163 Ribosomal protein S4/S9 N-terminal domain WCLE_007150 PF01479 S4 domain WCLE_007170 PF04384 Iron-sulphur cluster assembly WCLE_007190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WCLE_007190 PF01872 RibD C-terminal domain WCLE_00720 PF00572 Ribosomal protein L13 WCLE_007200 PF01966 HD domain WCLE_007200 PF13286 Phosphohydrolase-associated domain WCLE_007210 PF01521 Iron-sulphur cluster biosynthesis WCLE_007220 PF00005 ABC transporter WCLE_007250 PF00266 Aminotransferase class-V WCLE_007260 PF01609 Transposase DDE domain WCLE_007270 PF13340 WCLE_007270 WCLE_007290 PF00005 ABC transporter WCLE_00730 PF00380 Ribosomal protein S9/S16 WCLE_007320 PF00152 tRNA synthetases class II (D, K and N) WCLE_007320 PF01336 OB-fold nucleic acid binding domain WCLE_007320 PF02938 GAD domain WCLE_007330 PF07690 Major Facilitator Superfamily WCLE_007340 PF00707 Translation initiation factor IF-3, C-terminal domain WCLE_007340 PF05198 Translation initiation factor IF-3, N-terminal domain WCLE_007350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WCLE_007350 PF03129 Anticodon binding domain WCLE_007350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WCLE_007370 PF01380 SIS domain WCLE_007370 PF13522 Glutamine amidotransferase domain WCLE_007380 PF02699 Preprotein translocase subunit WCLE_00740 PF00216 Bacterial DNA-binding protein WCLE_007400 PF00488 MutS domain V WCLE_007400 PF01624 MutS domain I WCLE_007400 PF05188 MutS domain II WCLE_007400 PF05190 MutS family domain IV WCLE_007400 PF05192 MutS domain III WCLE_007410 PF01612 3'-5' exonuclease WCLE_007420 PF01121 Dephospho-CoA kinase WCLE_007430 PF03060 Nitronate monooxygenase WCLE_007450 PF13340 WCLE_007450 WCLE_007460 PF13586 WCLE_007460 WCLE_007470 PF13340 WCLE_007470 WCLE_007480 PF13673 Acetyltransferase (GNAT) domain WCLE_007490 PF00717 Peptidase S24-like WCLE_007490 PF10502 Signal peptidase, peptidase S26 WCLE_00750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WCLE_007500 PF00012 Hsp70 protein WCLE_007510 PF07743 HSCB C-terminal oligomerisation domain WCLE_007520 PF01521 Iron-sulphur cluster biosynthesis WCLE_007530 PF01592 NifU-like N terminal domain WCLE_007540 PF00448 SRP54-type protein, GTPase domain WCLE_007540 PF02881 SRP54-type protein, helical bundle domain WCLE_007550 PF13481 AAA domain WCLE_007550 PF13541 Subunit ChlI of Mg-chelatase WCLE_007560 PF00107 Zinc-binding dehydrogenase WCLE_007560 PF08240 Alcohol dehydrogenase GroES-like domain WCLE_007580 PF00226 DnaJ domain WCLE_00760 PF12784 WCLE_00760 WCLE_007600 PF00355 Rieske [2Fe-2S] domain WCLE_007600 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WCLE_007610 PF00521 DNA gyrase/topoisomerase IV, subunit A WCLE_007610 PF03989 DNA gyrase C-terminal domain, beta-propeller WCLE_007630 PF13637 Ankyrin repeats (many copies) WCLE_007630 PF13857 Ankyrin repeats (many copies) WCLE_007640 PF14534 Domain of unknown function (DUF4440) WCLE_007650 PF04452 RNA methyltransferase WCLE_007670 PF00270 DEAD/DEAH box helicase WCLE_007670 PF00271 Helicase conserved C-terminal domain WCLE_007680 PF00313 'Cold-shock' DNA-binding domain WCLE_007690 PF01523 Putative modulator of DNA gyrase WCLE_007700 PF00231 ATP synthase WCLE_007720 PF13340 WCLE_007720 WCLE_007730 PF13857 Ankyrin repeats (many copies) WCLE_007750 PF00580 UvrD/REP helicase N-terminal domain WCLE_007750 PF13361 UvrD-like helicase C-terminal domain WCLE_007770 PF00085 Thioredoxin WCLE_007780 PF01612 3'-5' exonuclease WCLE_00780 PF02661 Fic/DOC family WCLE_007810 PF01609 Transposase DDE domain WCLE_007820 PF13340 WCLE_007820 WCLE_007830 PF00023 Ankyrin repeat WCLE_007840 PF00676 Dehydrogenase E1 component WCLE_007840 PF02779 Transketolase, pyrimidine binding domain WCLE_007840 PF16078 WCLE_007840 WCLE_007840 PF16870 WCLE_007840 WCLE_007850 PF13586 WCLE_007850 WCLE_007860 PF13340 WCLE_007860 WCLE_007880 PF00023 Ankyrin repeat WCLE_007880 PF12796 Ankyrin repeats (3 copies) WCLE_007890 PF09343 WCLE_007890 WCLE_00790 PF01113 Dihydrodipicolinate reductase, N-terminus WCLE_00790 PF05173 Dihydrodipicolinate reductase, C-terminus WCLE_007900 PF13462 Thioredoxin WCLE_007910 PF01637 Archaeal ATPase WCLE_007920 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WCLE_007930 PF01734 Patatin-like phospholipase WCLE_007950 PF01578 WCLE_007950 WCLE_007970 PF05016 Plasmid stabilisation system protein WCLE_007990 PF01029 NusB family WCLE_00800 PF00005 ABC transporter WCLE_008000 PF00885 6,7-dimethyl-8-ribityllumazine synthase WCLE_008010 PF02096 60Kd inner membrane protein WCLE_008010 PF14849 YidC periplasmic domain WCLE_008020 PF13975 WCLE_008020 WCLE_008030 PF02355 Protein export membrane protein WCLE_008030 PF07549 SecD/SecF GG Motif WCLE_008040 PF13340 WCLE_008040 WCLE_008050 PF01609 Transposase DDE domain WCLE_008060 PF13586 WCLE_008060 WCLE_008070 PF01381 Helix-turn-helix WCLE_008070 PF09225 Restriction endonuclease PvuII WCLE_008080 PF01555 DNA methylase WCLE_008090 PF01609 Transposase DDE domain WCLE_00810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WCLE_00810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal WCLE_00810 PF13288 DXP reductoisomerase C-terminal domain WCLE_008100 PF13340 WCLE_008100 WCLE_008120 PF01578 WCLE_008120 WCLE_008120 PF16327 WCLE_008120 WCLE_008130 PF01609 Transposase DDE domain WCLE_008140 PF13340 WCLE_008140 WCLE_008150 PF05175 Methyltransferase small domain WCLE_008160 PF13340 WCLE_008160 WCLE_008170 PF01609 Transposase DDE domain WCLE_008180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WCLE_008180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WCLE_008200 PF01609 Transposase DDE domain WCLE_008210 PF13340 WCLE_008210 WCLE_008220 PF01715 IPP transferase WCLE_008250 PF00239 Resolvase, N terminal domain WCLE_008250 PF07508 Recombinase WCLE_008250 PF13408 Recombinase zinc beta ribbon domain WCLE_008270 PF12796 Ankyrin repeats (3 copies) WCLE_008290 PF12796 Ankyrin repeats (3 copies) WCLE_00830 PF03653 WCLE_00830 WCLE_008300 PF12796 Ankyrin repeats (3 copies) WCLE_008310 PF13340 WCLE_008310 WCLE_008320 PF01609 Transposase DDE domain WCLE_008330 PF01409 tRNA synthetases class II core domain (F) WCLE_008330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WCLE_008340 PF00132 Bacterial transferase hexapeptide (six repeats) WCLE_008340 PF12804 MobA-like NTP transferase domain WCLE_008340 PF14602 Hexapeptide repeat of succinyl-transferase WCLE_008350 PF13340 WCLE_008350 WCLE_008360 PF13586 WCLE_008360 WCLE_008380 PF13586 WCLE_008380 WCLE_008390 PF13340 WCLE_008390 WCLE_00840 PF00676 Dehydrogenase E1 component WCLE_008410 PF12796 Ankyrin repeats (3 copies) WCLE_008410 PF13637 Ankyrin repeats (many copies) WCLE_008450 PF12784 WCLE_008450 WCLE_008460 PF13586 WCLE_008460 WCLE_008470 PF13340 WCLE_008470 WCLE_008480 PF00023 Ankyrin repeat WCLE_008480 PF12796 Ankyrin repeats (3 copies) WCLE_00850 PF01523 Putative modulator of DNA gyrase WCLE_008500 PF00202 Aminotransferase class-III WCLE_008510 PF13500 AAA domain WCLE_008520 PF13649 Methyltransferase domain WCLE_008540 PF00155 Aminotransferase class I and II WCLE_008550 PF04055 Radical SAM superfamily WCLE_008550 PF06968 Biotin and Thiamin Synthesis associated domain WCLE_008570 PF02222 ATP-grasp domain WCLE_008580 PF04379 Protein of unknown function (DUF525) WCLE_008590 PF00528 Binding-protein-dependent transport system inner membrane component WCLE_008600 PF00581 Rhodanese-like domain WCLE_008610 PF13586 WCLE_008610 WCLE_008620 PF13340 WCLE_008620 WCLE_008630 PF00005 ABC transporter WCLE_008650 PF13586 WCLE_008650 WCLE_008660 PF13340 WCLE_008660 WCLE_008670 PF01176 Translation initiation factor 1A / IF-1 WCLE_008680 PF02545 Maf-like protein WCLE_008690 PF13340 WCLE_008690 WCLE_008700 PF13586 WCLE_008700 WCLE_008730 PF13177 DNA polymerase III, delta subunit WCLE_008740 PF01300 Telomere recombination WCLE_008760 PF13340 WCLE_008760 WCLE_008770 PF01609 Transposase DDE domain WCLE_008780 PF13586 WCLE_008780 WCLE_008790 PF01791 DeoC/LacD family aldolase WCLE_00880 PF00004 ATPase family associated with various cellular activities (AAA) WCLE_00880 PF07724 AAA domain (Cdc48 subfamily) WCLE_00880 PF10431 C-terminal, D2-small domain, of ClpB protein WCLE_008830 PF13561 Enoyl-(Acyl carrier protein) reductase WCLE_008840 PF12838 4Fe-4S dicluster domain WCLE_008850 PF08529 NusA N-terminal domain WCLE_008850 PF13184 NusA-like KH domain WCLE_008850 PF14520 Helix-hairpin-helix domain WCLE_008860 PF00009 Elongation factor Tu GTP binding domain WCLE_008860 PF04760 Translation initiation factor IF-2, N-terminal region WCLE_008860 PF11987 Translation-initiation factor 2 WCLE_008870 PF02033 Ribosome-binding factor A WCLE_008880 PF01040 UbiA prenyltransferase family WCLE_008890 PF01098 WCLE_008890 WCLE_00890 PF00227 Proteasome subunit WCLE_008900 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_008920 PF05071 WCLE_008920 WCLE_008930 PF02470 WCLE_008930 WCLE_008950 PF00183 Hsp90 protein WCLE_008950 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WCLE_008960 PF01764 Lipase (class 3) WCLE_008970 PF00155 Aminotransferase class I and II WCLE_008980 PF00459 Inositol monophosphatase family WCLE_008990 PF01132 Elongation factor P (EF-P) OB domain WCLE_008990 PF08207 Elongation factor P (EF-P) KOW-like domain WCLE_008990 PF09285 Elongation factor P, C-terminal WCLE_00900 PF08886 Glutamate-cysteine ligase WCLE_009000 PF01782 RimM N-terminal domain WCLE_009000 PF05239 PRC-barrel domain WCLE_009010 PF13340 WCLE_009010 WCLE_009020 PF01609 Transposase DDE domain WCLE_009030 PF13586 WCLE_009030 WCLE_009040 PF00216 Bacterial DNA-binding protein WCLE_009050 PF13411 MerR HTH family regulatory protein WCLE_009060 PF13340 WCLE_009060 WCLE_009070 PF13586 WCLE_009070 WCLE_009080 PF01632 Ribosomal protein L35 WCLE_009090 PF00453 Ribosomal protein L20 WCLE_009100 PF00551 Formyl transferase WCLE_009100 PF02911 Formyl transferase, C-terminal domain WCLE_009120 PF00117 Glutamine amidotransferase class-I WCLE_009120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WCLE_009150 PF00009 Elongation factor Tu GTP binding domain WCLE_009150 PF03143 Elongation factor Tu C-terminal domain WCLE_009150 PF03144 Elongation factor Tu domain 2 WCLE_009170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WCLE_009180 PF02357 Transcription termination factor nusG WCLE_009190 PF00298 Ribosomal protein L11, RNA binding domain WCLE_009190 PF03946 Ribosomal protein L11, N-terminal domain WCLE_00920 PF13340 WCLE_00920 WCLE_009200 PF00687 Ribosomal protein L1p/L10e family WCLE_009210 PF00466 Ribosomal protein L10 WCLE_009220 PF00542 Ribosomal protein L7/L12 C-terminal domain WCLE_009220 PF16320 WCLE_009220 WCLE_009230 PF00562 RNA polymerase Rpb2, domain 6 WCLE_009230 PF00623 RNA polymerase Rpb1, domain 2 WCLE_009230 PF04560 RNA polymerase Rpb2, domain 7 WCLE_009230 PF04561 RNA polymerase Rpb2, domain 2 WCLE_009230 PF04563 RNA polymerase beta subunit WCLE_009230 PF04565 RNA polymerase Rpb2, domain 3 WCLE_009230 PF04983 RNA polymerase Rpb1, domain 3 WCLE_009230 PF04997 RNA polymerase Rpb1, domain 1 WCLE_009230 PF04998 RNA polymerase Rpb1, domain 5 WCLE_009230 PF05000 RNA polymerase Rpb1, domain 4 WCLE_009230 PF10385 RNA polymerase beta subunit external 1 domain WCLE_009250 PF00140 Sigma-70 factor, region 1 WCLE_009250 PF03979 Sigma-70 factor, region 1 WCLE_009250 PF04539 Sigma-70 region 3 WCLE_009250 PF04542 Sigma-70 region 2 WCLE_009250 PF04545 Sigma-70, region 4 WCLE_009250 PF04546 Sigma-70, non-essential region WCLE_009260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WCLE_009270 PF04039 WCLE_009270 WCLE_009280 PF13244 WCLE_009280 WCLE_009290 PF03334 WCLE_009290 WCLE_00930 PF01609 Transposase DDE domain WCLE_009300 PF04066 WCLE_009300 WCLE_009310 PF01192 RNA polymerase Rpb6 WCLE_009320 PF13744 Helix-turn-helix domain WCLE_009330 PF13586 WCLE_009330 WCLE_009340 PF13340 WCLE_009340 WCLE_009350 PF00731 AIR carboxylase WCLE_009360 PF01119 DNA mismatch repair protein, C-terminal domain WCLE_009360 PF08676 MutL C terminal dimerisation domain WCLE_009360 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WCLE_009390 PF13340 WCLE_009390 WCLE_00940 PF00762 Ferrochelatase WCLE_009400 PF13586 WCLE_009400 WCLE_009410 PF13340 WCLE_009410 WCLE_009430 PF02463 RecF/RecN/SMC N terminal domain WCLE_009440 PF00578 AhpC/TSA family WCLE_009450 PF00202 Aminotransferase class-III WCLE_009470 PF12784 WCLE_009470 WCLE_009480 PF07722 Peptidase C26 WCLE_009500 PF01467 Cytidylyltransferase WCLE_009520 PF01148 Cytidylyltransferase family WCLE_009530 PF01255 Putative undecaprenyl diphosphate synthase WCLE_009540 PF01765 Ribosome recycling factor WCLE_009550 PF00696 Amino acid kinase family WCLE_009560 PF00889 Elongation factor TS WCLE_009570 PF00318 Ribosomal protein S2 WCLE_009590 PF03054 tRNA methyl transferase WCLE_00960 PF00334 Nucleoside diphosphate kinase WCLE_009620 PF13340 WCLE_009620 WCLE_009630 PF13586 WCLE_009630 WCLE_009640 PF02016 LD-carboxypeptidase WCLE_009650 PF03099 Biotin/lipoate A/B protein ligase family WCLE_009660 PF04860 Phage portal protein WCLE_009670 PF13637 Ankyrin repeats (many copies) WCLE_009690 PF00712 DNA polymerase III beta subunit, N-terminal domain WCLE_009690 PF02767 DNA polymerase III beta subunit, central domain WCLE_009690 PF02768 DNA polymerase III beta subunit, C-terminal domain WCLE_00970 PF01297 Periplasmic solute binding protein family WCLE_009700 PF01416 tRNA pseudouridine synthase WCLE_009710 PF13340 WCLE_009710 WCLE_009720 PF01609 Transposase DDE domain WCLE_009730 PF00677 Lumazine binding domain WCLE_009740 PF02674 WCLE_009740 WCLE_009760 PF01609 Transposase DDE domain WCLE_009770 PF13340 WCLE_009770 WCLE_009790 PF01668 SmpB protein WCLE_00980 PF00005 ABC transporter WCLE_009800 PF01790 WCLE_009800 WCLE_009820 PF12796 Ankyrin repeats (3 copies) WCLE_009850 PF05016 Plasmid stabilisation system protein WCLE_009870 PF01425 Amidase WCLE_009880 PF03547 WCLE_009880 WCLE_009890 PF00109 Beta-ketoacyl synthase, N-terminal domain WCLE_009890 PF02801 Beta-ketoacyl synthase, C-terminal domain WCLE_00990 PF03109 WCLE_00990 WCLE_009900 PF00550 Phosphopantetheine attachment site WCLE_009910 PF00348 Polyprenyl synthetase WCLE_009920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WCLE_009930 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WCLE_009940 PF12784 WCLE_009940 WCLE_009950 PF01609 Transposase DDE domain WCLE_009960 PF13340 WCLE_009960 WCLE_009970 PF01609 Transposase DDE domain WCLE_009980 PF13340 WCLE_009980 WCLE_009990 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin WCLE_010000 PF13340 WCLE_010000 WCLE_010010 PF01609 Transposase DDE domain WCLE_010060 PF13520 Amino acid permease WCLE_010070 PF13520 Amino acid permease WCLE_010080 PF01808 AICARFT/IMPCHase bienzyme WCLE_010080 PF02142 MGS-like domain WCLE_010100 PF02401 LytB protein WCLE_010110 PF00905 Penicillin binding protein transpeptidase domain WCLE_010110 PF03717 Penicillin-binding Protein dimerisation domain WCLE_010130 PF00210 Ferritin-like domain WCLE_010140 PF02104 WCLE_010140 WCLE_010150 PF00999 Sodium/hydrogen exchanger family WCLE_010150 PF02254 TrkA-N domain WCLE_010160 PF00578 AhpC/TSA family WCLE_010170 PF02223 Thymidylate kinase WCLE_010190 PF01921 tRNA synthetases class I (K) WCLE_010200 PF05101 WCLE_010200 WCLE_010210 PF03135 WCLE_010210 WCLE_010220 PF04610 WCLE_010220 WCLE_010230 PF04610 WCLE_010230 WCLE_010240 PF04610 WCLE_010240 WCLE_010250 PF04610 WCLE_010250 WCLE_010270 PF00557 Metallopeptidase family M24 WCLE_010300 PF01118 Semialdehyde dehydrogenase, NAD binding domain WCLE_010300 PF02774 Semialdehyde dehydrogenase, dimerisation domain WCLE_010320 PF07992 Pyridine nucleotide-disulphide oxidoreductase WCLE_010330 PF07977 FabA-like domain WCLE_010340 PF03938 Outer membrane protein (OmpH-like) WCLE_010350 PF01103 Surface antigen WCLE_010350 PF07244 Surface antigen variable number repeat WCLE_010360 PF02163 Peptidase family M50 WCLE_010360 PF13180 PDZ domain WCLE_010370 PF03937 Flavinator of succinate dehydrogenase WCLE_010380 PF13340 WCLE_010380 WCLE_010390 PF01609 Transposase DDE domain WCLE_010400 PF01926 50S ribosome-binding GTPase WCLE_010400 PF07650 KH domain WCLE_010410 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB WCLE_010420 PF17289 WCLE_010420 WCLE_010440 PF03372 Endonuclease/Exonuclease/phosphatase family WCLE_010450 PF02602 Uroporphyrinogen-III synthase HemD WCLE_010460 PF00375 Sodium:dicarboxylate symporter family WCLE_010480 PF13340 WCLE_010480 WCLE_010490 PF13586 WCLE_010490 WCLE_010500 PF00156 Phosphoribosyl transferase domain WCLE_010500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WCLE_010510 PF02686 Glu-tRNAGln amidotransferase C subunit WCLE_010530 PF00919 Uncharacterized protein family UPF0004 WCLE_010530 PF04055 Radical SAM superfamily WCLE_010540 PF01617 WCLE_010540 WCLE_010550 PF00263 WCLE_010550 WCLE_010560 PF13586 WCLE_010560 WCLE_010570 PF13340 WCLE_010570 WCLE_010590 PF13340 WCLE_010590 WCLE_010600 PF13586 WCLE_010600 WCLE_010620 PF00701 Dihydrodipicolinate synthetase family WCLE_010630 PF00436 Single-strand binding protein family WCLE_010660 PF13181 Tetratricopeptide repeat WCLE_010680 PF02687 WCLE_010680 WCLE_010680 PF12704 MacB-like periplasmic core domain WCLE_010690 PF02637 GatB domain WCLE_010690 PF02934 GatB/GatE catalytic domain WCLE_010700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WCLE_010700 PF07497 Rho termination factor, RNA-binding domain WCLE_010700 PF07498 Rho termination factor, N-terminal domain WCLE_010710 PF06242 WCLE_010710 WCLE_010740 PF00814 Glycoprotease family WCLE_010750 PF00005 ABC transporter WCLE_010750 PF00664 ABC transporter transmembrane region WCLE_010760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WCLE_010760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WCLE_010760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WCLE_010780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WCLE_010780 PF02542 YgbB family WCLE_010790 PF00132 Bacterial transferase hexapeptide (six repeats) WCLE_010800 PF12784 WCLE_010800 WCLE_010830 PF00133 tRNA synthetases class I (I, L, M and V) WCLE_010830 PF08264 Anticodon-binding domain of tRNA WCLE_010850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WCLE_010860 PF13340 WCLE_010860 WCLE_010870 PF13586 WCLE_010870 WCLE_010880 PF13374 Tetratricopeptide repeat WCLE_010880 PF13424 Tetratricopeptide repeat WCLE_010890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WCLE_010890 PF00364 Biotin-requiring enzyme WCLE_010890 PF02817 e3 binding domain WCLE_010900 PF13340 WCLE_010900 WCLE_010910 PF01609 Transposase DDE domain WCLE_010920 PF03618 WCLE_010920 WCLE_010930 PF00444 Ribosomal protein L36 WCLE_010940 PF04977 Septum formation initiator WCLE_010950 PF00775 Dioxygenase WCLE_010960 PF00883 Cytosol aminopeptidase family, catalytic domain WCLE_010960 PF02789 Cytosol aminopeptidase family, N-terminal domain WCLE_010980 PF01965 DJ-1/PfpI family WCLE_010990 PF00625 Guanylate kinase WCLE_011000 PF00805 Pentapeptide repeats (8 copies) WCLE_011000 PF13599 Pentapeptide repeats (9 copies) WCLE_011010 PF13637 Ankyrin repeats (many copies) WCLE_011040 PF00719 Inorganic pyrophosphatase WCLE_011050 PF03232 WCLE_011050 WCLE_011060 PF02600 Disulfide bond formation protein DsbB WCLE_011070 PF01926 50S ribosome-binding GTPase WCLE_011070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WCLE_011100 PF13586 WCLE_011100 WCLE_011110 PF13340 WCLE_011110 WCLE_011130 PF00750 tRNA synthetases class I (R) WCLE_011130 PF03485 Arginyl tRNA synthetase N terminal domain WCLE_011130 PF05746 DALR anticodon binding domain WCLE_011150 PF13586 WCLE_011150 WCLE_011160 PF13340 WCLE_011160 WCLE_011180 PF03553 WCLE_011180 WCLE_011190 PF12796 Ankyrin repeats (3 copies) WCLE_011200 PF13340 WCLE_011200 WCLE_011210 PF01609 Transposase DDE domain WCLE_011220 PF01555 DNA methylase WCLE_011230 PF12784 WCLE_011230 WCLE_011250 PF05491 Holliday junction DNA helicase ruvB C-terminus WCLE_011250 PF05496 Holliday junction DNA helicase ruvB N-terminus WCLE_011260 PF01330 RuvA N terminal domain WCLE_011260 PF07499 RuvA, C-terminal domain WCLE_011260 PF14520 Helix-hairpin-helix domain WCLE_011270 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel WCLE_011280 PF01225 Mur ligase family, catalytic domain WCLE_011280 PF02875 Mur ligase family, glutamate ligase domain WCLE_011280 PF08245 Mur ligase middle domain WCLE_011290 PF00113 Enolase, C-terminal TIM barrel domain WCLE_011290 PF03952 Enolase, N-terminal domain WCLE_011300 PF01018 GTP1/OBG WCLE_011300 PF01926 50S ribosome-binding GTPase WCLE_011310 PF04800 ETC complex I subunit conserved region WCLE_011320 PF02230 Phospholipase/Carboxylesterase WCLE_011360 PF01509 TruB family pseudouridylate synthase (N terminal domain) WCLE_011360 PF16198 WCLE_011360 WCLE_011370 PF00312 Ribosomal protein S15 WCLE_011380 PF00013 KH domain WCLE_011380 PF00575 S1 RNA binding domain WCLE_011380 PF01138 3' exoribonuclease family, domain 1 WCLE_011380 PF03725 3' exoribonuclease family, domain 2 WCLE_011380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WCLE_011390 PF00834 Ribulose-phosphate 3 epimerase family WCLE_011410 PF06271 WCLE_011410 WCLE_011420 PF13419 Haloacid dehalogenase-like hydrolase WCLE_011430 PF00004 ATPase family associated with various cellular activities (AAA) WCLE_011430 PF02190 ATP-dependent protease La (LON) domain WCLE_011430 PF05362 Lon protease (S16) C-terminal proteolytic domain WCLE_011440 PF06689 ClpX C4-type zinc finger WCLE_011440 PF07724 AAA domain (Cdc48 subfamily) WCLE_011440 PF10431 C-terminal, D2-small domain, of ClpB protein WCLE_011450 PF00574 Clp protease WCLE_011460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WCLE_011460 PF05697 Bacterial trigger factor protein (TF) WCLE_011460 PF05698 Bacterial trigger factor protein (TF) C-terminus WCLE_011480 PF04972 BON domain WCLE_011490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WCLE_011490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WCLE_011500 PF03033 Glycosyltransferase family 28 N-terminal domain WCLE_011500 PF04101 Glycosyltransferase family 28 C-terminal domain WCLE_011520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WCLE_011520 PF07992 Pyridine nucleotide-disulphide oxidoreductase WCLE_011530 PF00575 S1 RNA binding domain WCLE_011540 PF00216 Bacterial DNA-binding protein WCLE_011550 PF13340 WCLE_011550 WCLE_011560 PF01609 Transposase DDE domain WCLE_011570 PF13340 WCLE_011570 WCLE_011590 PF13586 WCLE_011590 WCLE_011600 PF13416 Bacterial extracellular solute-binding protein WCLE_011630 PF01513 ATP-NAD kinase WCLE_011640 PF01197 Ribosomal protein L31 WCLE_011650 PF00698 Acyl transferase domain WCLE_011670 PF01676 Metalloenzyme superfamily WCLE_011670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WCLE_011680 PF01609 Transposase DDE domain WCLE_011690 PF13340 WCLE_011690 WCLE_011700 PF12796 Ankyrin repeats (3 copies) WCLE_011720 PF14518 Iron-containing redox enzyme WCLE_011730 PF02152 Dihydroneopterin aldolase WCLE_011740 PF00809 Pterin binding enzyme WCLE_011740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WCLE_011750 PF00186 Dihydrofolate reductase WCLE_011760 PF01996 F420-0:Gamma-glutamyl ligase WCLE_011770 PF13586 WCLE_011770 WCLE_011780 PF13340 WCLE_011780 WCLE_011790 PF00156 Phosphoribosyl transferase domain WCLE_011790 PF13537 Glutamine amidotransferase domain WCLE_011800 PF03741 WCLE_011800 WCLE_011810 PF12796 Ankyrin repeats (3 copies) WCLE_011830 PF01899 WCLE_011830 WCLE_011850 PF00551 Formyl transferase WCLE_011860 PF00675 Insulinase (Peptidase family M16) WCLE_011860 PF05193 Peptidase M16 inactive domain WCLE_011870 PF00675 Insulinase (Peptidase family M16) WCLE_011870 PF05193 Peptidase M16 inactive domain WCLE_011880 PF01252 WCLE_011880 WCLE_011890 PF01687 Riboflavin kinase WCLE_011890 PF06574 FAD synthetase WCLE_011900 PF00462 Glutaredoxin WCLE_011920 PF02245 Methylpurine-DNA glycosylase (MPG) WCLE_011930 PF13586 WCLE_011930 WCLE_011940 PF13340 WCLE_011940 WCLE_011950 PF12796 Ankyrin repeats (3 copies) WCLE_011960 PF01131 DNA topoisomerase WCLE_011960 PF01396 WCLE_011960 WCLE_011960 PF01751 Toprim domain WCLE_011960 PF13368 WCLE_011960 WCLE_011970 PF00639 PPIC-type PPIASE domain WCLE_011970 PF13624 SurA N-terminal domain WCLE_011980 PF01207 Dihydrouridine synthase (Dus) WCLE_012000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WCLE_012000 PF02403 Seryl-tRNA synthetase N-terminal domain WCLE_012010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WCLE_012010 PF02843 Phosphoribosylglycinamide synthetase, C domain WCLE_012010 PF02844 Phosphoribosylglycinamide synthetase, N domain WCLE_012030 PF00117 Glutamine amidotransferase class-I WCLE_012030 PF00958 GMP synthase C terminal domain WCLE_012030 PF02540 NAD synthase WCLE_012040 PF02132 RecR protein WCLE_012040 PF13662 Toprim domain WCLE_012050 PF13340 WCLE_012050 WCLE_012060 PF01609 Transposase DDE domain WCLE_012070 PF00579 tRNA synthetases class I (W and Y) WCLE_012080 PF01025 GrpE WCLE_012090 PF00348 Polyprenyl synthetase WCLE_012100 PF00886 Ribosomal protein S16 WCLE_012110 PF01648 4'-phosphopantetheinyl transferase superfamily WCLE_012120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WCLE_012120 PF03129 Anticodon binding domain WCLE_012140 PF00905 Penicillin binding protein transpeptidase domain WCLE_012140 PF03717 Penicillin-binding Protein dimerisation domain WCLE_012150 PF02146 Sir2 family WCLE_012160 PF02146 Sir2 family WCLE_012190 PF06723 MreB/Mbl protein WCLE_012200 PF02074 Carboxypeptidase Taq (M32) metallopeptidase WCLE_012210 PF00691 OmpA family WCLE_012220 PF01171 PP-loop family WCLE_012230 PF00004 ATPase family associated with various cellular activities (AAA) WCLE_012230 PF01434 Peptidase family M41 WCLE_012230 PF06480 FtsH Extracellular WCLE_012240 PF01609 Transposase DDE domain WCLE_012250 PF13340 WCLE_012250 WCLE_012270 PF13340 WCLE_012270 WCLE_012280 PF13586 WCLE_012280 WCLE_012300 PF01043 SecA preprotein cross-linking domain WCLE_012300 PF02810 SEC-C motif WCLE_012300 PF07516 SecA Wing and Scaffold domain WCLE_012300 PF07517 SecA DEAD-like domain WCLE_012330 PF12796 Ankyrin repeats (3 copies) WCLE_012330 PF13857 Ankyrin repeats (many copies) WCLE_012340 PF00268 Ribonucleotide reductase, small chain WCLE_012350 PF04355 SmpA / OmlA family WCLE_012360 PF00919 Uncharacterized protein family UPF0004 WCLE_012360 PF01938 TRAM domain WCLE_012360 PF04055 Radical SAM superfamily WCLE_012370 PF00133 tRNA synthetases class I (I, L, M and V) WCLE_012370 PF08264 Anticodon-binding domain of tRNA WCLE_012380 PF13340 WCLE_012380 WCLE_012390 PF13586 WCLE_012390 WCLE_012410 PF01411 tRNA synthetases class II (A) WCLE_012410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WCLE_012430 PF02811 PHP domain WCLE_012430 PF07733 Bacterial DNA polymerase III alpha subunit WCLE_012430 PF14579 Helix-hairpin-helix motif WCLE_012440 PF01250 Ribosomal protein S6 WCLE_012450 PF01084 Ribosomal protein S18 WCLE_012460 PF01281 Ribosomal protein L9, N-terminal domain WCLE_012460 PF03948 Ribosomal protein L9, C-terminal domain WCLE_012510 PF00146 NADH dehydrogenase WCLE_012520 PF00384 Molybdopterin oxidoreductase WCLE_012520 PF09326 WCLE_012520 WCLE_012520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WCLE_012520 PF13510 2Fe-2S iron-sulfur cluster binding domain WCLE_012540 PF00709 Adenylosuccinate synthetase WCLE_012560 PF00120 Glutamine synthetase, catalytic domain