WCLE_00010	SM00382	ATPases associated with a variety of cellular activities
WCLE_00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
WCLE_001020	SM00487	DEAD-like helicases superfamily
WCLE_001020	SM00490	helicase superfamily c-terminal domain
WCLE_001140	SM00478	endonuclease III
WCLE_001140	SM00525	WCLE_001140
WCLE_001150	SM01329	WCLE_001150
WCLE_001230	SM00248	ankyrin repeats
WCLE_00130	SM00387	Histidine kinase-like ATPases
WCLE_00130	SM00388	His Kinase A (phosphoacceptor) domain
WCLE_00130	SM00448	cheY-homologous receiver domain
WCLE_001330	SM00244	prohibitin homologues
WCLE_001340	SM00244	prohibitin homologues
WCLE_001350	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WCLE_001390	SM00248	ankyrin repeats
WCLE_001400	SM00248	ankyrin repeats
WCLE_001410	SM00248	ankyrin repeats
WCLE_001590	SM00155	Phospholipase D. Active site motifs.
WCLE_001640	SM00465	GIY-YIG type nucleases (URI domain)
WCLE_00170	SM00248	ankyrin repeats
WCLE_00170	SM00271	DnaJ molecular chaperone homology domain
WCLE_001730	SM01004	Delta-aminolevulinic acid dehydratase
WCLE_00180	SM00487	DEAD-like helicases superfamily
WCLE_00180	SM00490	helicase superfamily c-terminal domain
WCLE_001840	SM00382	ATPases associated with a variety of cellular activities
WCLE_001980	SM00838	Elongation factor G C-terminus
WCLE_001980	SM00889	Elongation factor G, domain IV
WCLE_002000	SM01403	WCLE_002000
WCLE_002040	SM01382	WCLE_002040
WCLE_002040	SM01383	WCLE_002040
WCLE_002110	SM01374	WCLE_002110
WCLE_002240	SM00662	RNA polymerases D
WCLE_002410	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
WCLE_002410	SM00475	5'-3' exonuclease
WCLE_002410	SM00482	DNA polymerase A domain
WCLE_002450	SM00842	Cell division protein FtsA
WCLE_002470	SM00986	Uracil DNA glycosylase superfamily
WCLE_002470	SM00987	UreE urease accessory protein, C-terminal domain 
WCLE_00250	SM00382	ATPases associated with a variety of cellular activities
WCLE_002580	SM00861	Transketolase, pyrimidine binding domain
WCLE_002590	SM00116	Domain in cystathionine beta-synthase and other proteins.
WCLE_002590	SM00924	MgtE intracellular N domain
WCLE_002600	SM00937	WCLE_002600
WCLE_002610	SM00248	ankyrin repeats
WCLE_002660	SM00248	ankyrin repeats
WCLE_002670	SM00248	ankyrin repeats
WCLE_002710	SM00248	ankyrin repeats
WCLE_002740	SM00564	beta-propeller repeat
WCLE_002750	SM00387	Histidine kinase-like ATPases
WCLE_002750	SM00433	TopoisomeraseII
WCLE_002960	SM01007	Class II Aldolase and Adducin N-terminal domain
WCLE_003060	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WCLE_003140	SM00316	Ribosomal protein S1-like RNA-binding domain
WCLE_003200	SM00729	Elongator protein 3, MiaB family, Radical SAM
WCLE_003220	SM00936	Penicillin-binding protein 5, C-terminal domain 
WCLE_003380	SM00400	zinc finger
WCLE_003380	SM00493	WCLE_003380
WCLE_00350	SM00563	Phosphate acyltransferases
WCLE_003580	SM00851	MGS-like domain
WCLE_003580	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WCLE_003670	SM00358	Double-stranded RNA binding motif
WCLE_003670	SM00535	Ribonuclease III family
WCLE_003740	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
WCLE_003740	SM01232	WCLE_003740
WCLE_003770	SM01228	WCLE_003770
WCLE_00380	SM00448	cheY-homologous receiver domain
WCLE_00380	SM00862	Transcriptional regulatory protein, C terminal
WCLE_003920	SM00873	B3/4 domain
WCLE_003920	SM00874	tRNA synthetase B5 domain
WCLE_003920	SM00896	Ferredoxin-fold anticodon binding domain
WCLE_003940	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
WCLE_004270	SM00116	Domain in cystathionine beta-synthase and other proteins.
WCLE_004270	SM01091	Transporter associated domain
WCLE_004670	SM00822	WCLE_004670
WCLE_004750	SM00271	DnaJ molecular chaperone homology domain
WCLE_004810	SM00244	prohibitin homologues
WCLE_004830	SM00248	ankyrin repeats
WCLE_005050	SM00479	WCLE_005050
WCLE_005060	SM00978	WCLE_005060
WCLE_00510	SM00864	Tubulin/FtsZ family, GTPase domain
WCLE_00510	SM00865	Tubulin/FtsZ family, C-terminal domain
WCLE_005100	SM00881	CoA binding domain
WCLE_005140	SM00248	ankyrin repeats
WCLE_005170	SM00248	ankyrin repeats
WCLE_00520	SM00382	ATPases associated with a variety of cellular activities
WCLE_005220	SM00292	breast cancer carboxy-terminal domain
WCLE_005220	SM00532	Ligase N family
WCLE_005280	SM00487	DEAD-like helicases superfamily
WCLE_005280	SM00490	helicase superfamily c-terminal domain
WCLE_005290	SM00248	ankyrin repeats
WCLE_00530	SM00382	ATPases associated with a variety of cellular activities
WCLE_00530	SM01086	C-terminal, D2-small domain, of ClpB protein
WCLE_005310	SM00932	Scaffold protein Nfu/NifU N terminal
WCLE_005320	SM00271	DnaJ molecular chaperone homology domain
WCLE_005480	SM00382	ATPases associated with a variety of cellular activities
WCLE_00550	SM00116	Domain in cystathionine beta-synthase and other proteins.
WCLE_00550	SM01240	WCLE_00550
WCLE_005510	SM00840	WCLE_005510
WCLE_005570	SM00937	WCLE_005570
WCLE_00560	SM00028	Tetratricopeptide repeats
WCLE_005660	SM00878	Biotin carboxylase C-terminal domain
WCLE_005730	SM00650	Ribosomal RNA adenine dimethylases
WCLE_00580	SM00248	ankyrin repeats
WCLE_005860	SM00248	ankyrin repeats
WCLE_00590	SM00248	ankyrin repeats
WCLE_00590	SM00271	DnaJ molecular chaperone homology domain
WCLE_006020	SM00382	ATPases associated with a variety of cellular activities
WCLE_006090	SM00028	Tetratricopeptide repeats
WCLE_006110	SM00732	Likely ribonuclease with RNase H fold.
WCLE_006130	SM01207	WCLE_006130
WCLE_006170	SM00382	ATPases associated with a variety of cellular activities
WCLE_006270	SM00248	ankyrin repeats
WCLE_006440	SM00382	ATPases associated with a variety of cellular activities
WCLE_006470	SM00919	Malic enzyme, NAD binding domain
WCLE_006470	SM01274	WCLE_006470
WCLE_006500	SM00382	ATPases associated with a variety of cellular activities
WCLE_006500	SM00843	WCLE_006500
WCLE_006540	SM01091	Transporter associated domain
WCLE_006610	SM01211	WCLE_006610
WCLE_006640	SM00365	Leucine-rich repeat, SDS22-like subfamily
WCLE_006640	SM00367	Leucine-rich repeat - CC (cysteine-containing) subfamily
WCLE_006640	SM00368	Leucine rich repeat, ribonuclease inhibitor type
WCLE_006640	SM00369	Leucine-rich repeats, typical (most populated) subfamily
WCLE_006750	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
WCLE_006770	SM00849	Metallo-beta-lactamase superfamily
WCLE_006790	SM00248	ankyrin repeats
WCLE_006940	SM00382	ATPases associated with a variety of cellular activities
WCLE_006940	SM00962	SRP54-type protein, GTPase domain
WCLE_006940	SM00963	SRP54-type protein, helical bundle domain
WCLE_007000	SM00248	ankyrin repeats
WCLE_007070	SM00883	Chaperonin 10 Kd subunit
WCLE_007140	SM00861	Transketolase, pyrimidine binding domain
WCLE_007150	SM00363	S4 RNA-binding domain
WCLE_007150	SM01390	WCLE_007150
WCLE_007200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WCLE_007220	SM00382	ATPases associated with a variety of cellular activities
WCLE_007290	SM00382	ATPases associated with a variety of cellular activities
WCLE_007350	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WCLE_007380	SM01323	WCLE_007380
WCLE_00740	SM00411	bacterial (prokaryotic) histone like domain
WCLE_007400	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WCLE_007400	SM00534	ATPase domain of DNA mismatch repair MUTS family
WCLE_007410	SM00474	3'-5' exonuclease
WCLE_007540	SM00382	ATPases associated with a variety of cellular activities
WCLE_007540	SM00962	SRP54-type protein, GTPase domain
WCLE_007540	SM00963	SRP54-type protein, helical bundle domain
WCLE_007550	SM00382	ATPases associated with a variety of cellular activities
WCLE_007560	SM00829	Enoylreductase
WCLE_007580	SM00271	DnaJ molecular chaperone homology domain
WCLE_007610	SM00434	DNA Topoisomerase IV
WCLE_007630	SM00248	ankyrin repeats
WCLE_007670	SM00487	DEAD-like helicases superfamily
WCLE_007670	SM00490	helicase superfamily c-terminal domain
WCLE_007680	SM00357	Cold shock protein domain
WCLE_007780	SM00474	3'-5' exonuclease
WCLE_007830	SM00248	ankyrin repeats
WCLE_007840	SM00861	Transketolase, pyrimidine binding domain
WCLE_007880	SM00248	ankyrin repeats
WCLE_00800	SM00382	ATPases associated with a variety of cellular activities
WCLE_008070	SM00530	Helix-turn-helix XRE-family like proteins 
WCLE_008250	SM00857	Resolvase, N terminal domain
WCLE_008290	SM00248	ankyrin repeats
WCLE_008300	SM00248	ankyrin repeats
WCLE_008370	SM00248	ankyrin repeats
WCLE_008410	SM00248	ankyrin repeats
WCLE_008480	SM00248	ankyrin repeats
WCLE_008550	SM00729	Elongator protein 3, MiaB family, Radical SAM
WCLE_008550	SM00876	Biotin and Thiamin Synthesis associated domain
WCLE_008600	SM00450	Rhodanese Homology Domain
WCLE_008790	SM01133	WCLE_008790
WCLE_00880	SM00382	ATPases associated with a variety of cellular activities
WCLE_00880	SM01086	C-terminal, D2-small domain, of ClpB protein
WCLE_008850	SM00316	Ribosomal protein S1-like RNA-binding domain
WCLE_008950	SM00387	Histidine kinase-like ATPases
WCLE_008990	SM00841	Elongation factor P, C-terminal
WCLE_008990	SM01185	WCLE_008990
WCLE_009040	SM00411	bacterial (prokaryotic) histone like domain
WCLE_009120	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WCLE_009180	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
WCLE_009190	SM00649	Ribosomal protein L11/L12
WCLE_009230	SM00663	RNA polymerase I subunit A N-terminus
WCLE_009310	SM01409	WCLE_009310
WCLE_009320	SM00530	Helix-turn-helix XRE-family like proteins 
WCLE_009350	SM01001	AIR carboxylase
WCLE_009360	SM00853	MutL C terminal dimerisation domain
WCLE_009360	SM01340	WCLE_009360
WCLE_00960	SM00562	WCLE_00960
WCLE_009690	SM00480	DNA polymerase III beta subunit
WCLE_00980	SM00382	ATPases associated with a variety of cellular activities
WCLE_009820	SM00248	ankyrin repeats
WCLE_009890	SM00825	Beta-ketoacyl synthase
WCLE_010080	SM00798	AICARFT/IMPCHase bienzyme
WCLE_010080	SM00851	MGS-like domain
WCLE_010210	SM00382	ATPases associated with a variety of cellular activities
WCLE_010300	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WCLE_010340	SM00935	Outer membrane protein (OmpH-like)
WCLE_010360	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WCLE_010500	SM01400	WCLE_010500
WCLE_010530	SM00729	Elongator protein 3, MiaB family, Radical SAM
WCLE_010620	SM01130	WCLE_010620
WCLE_010690	SM00845	GatB domain
WCLE_010700	SM00357	Cold shock protein domain
WCLE_010700	SM00382	ATPases associated with a variety of cellular activities
WCLE_010700	SM00959	Rho termination factor, N-terminal domain
WCLE_010750	SM00382	ATPases associated with a variety of cellular activities
WCLE_010850	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WCLE_010880	SM00028	Tetratricopeptide repeats
WCLE_010990	SM00072	Guanylate kinase homologues.
WCLE_011010	SM00248	ankyrin repeats
WCLE_011130	SM00836	DALR anticodon binding domain
WCLE_011130	SM01016	Arginyl tRNA synthetase N terminal dom
WCLE_011190	SM00248	ankyrin repeats
WCLE_011250	SM00382	ATPases associated with a variety of cellular activities
WCLE_011290	SM01192	WCLE_011290
WCLE_011290	SM01193	WCLE_011290
WCLE_011370	SM01387	WCLE_011370
WCLE_011380	SM00316	Ribosomal protein S1-like RNA-binding domain
WCLE_011380	SM00322	K homology RNA-binding domain
WCLE_011430	SM00382	ATPases associated with a variety of cellular activities
WCLE_011430	SM00464	Found in ATP-dependent protease La (LON)
WCLE_011440	SM00382	ATPases associated with a variety of cellular activities
WCLE_011440	SM00994	ClpX C4-type zinc finger
WCLE_011440	SM01086	C-terminal, D2-small domain, of ClpB protein
WCLE_011480	SM00749	bacterial OsmY and nodulation domain
WCLE_011530	SM00316	Ribosomal protein S1-like RNA-binding domain
WCLE_011540	SM00411	bacterial (prokaryotic) histone like domain
WCLE_011650	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
WCLE_011700	SM00248	ankyrin repeats
WCLE_011720	SM01236	WCLE_011720
WCLE_011730	SM00905	Dihydroneopterin aldolase
WCLE_011810	SM00248	ankyrin repeats
WCLE_011890	SM00904	Riboflavin kinase
WCLE_011950	SM00248	ankyrin repeats
WCLE_011960	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
WCLE_011960	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WCLE_011960	SM00493	WCLE_011960
WCLE_012010	SM01209	WCLE_012010
WCLE_012010	SM01210	WCLE_012010
WCLE_012040	SM00493	WCLE_012040
WCLE_012230	SM00382	ATPases associated with a variety of cellular activities
WCLE_012300	SM00957	SecA DEAD-like domain
WCLE_012300	SM00958	SecA preprotein cross-linking domain
WCLE_012330	SM00248	ankyrin repeats
WCLE_012360	SM00729	Elongator protein 3, MiaB family, Radical SAM
WCLE_012410	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WCLE_012430	SM00481	DNA polymerase alpha chain like domain
WCLE_012520	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
WCLE_012540	SM00788	Adenylosuccinate synthetase
WCLE_012560	SM01230	WCLE_012560
