locus-tag	class	description
GOY13_00010	COG0493	'glutamate synthase
GOY13_00010	COG0543	2 iron, 2 sulfur cluster binding
GOY13_00025	COG0187	DNA topoisomerase II activity
GOY13_00035	COG3474	cytochrome
GOY13_00050	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GOY13_00055	COG0138	bifunctional purine biosynthesis protein purh
GOY13_00060	COG0114	fumarate hydratase activity
GOY13_00065	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
GOY13_00075	COG3451	type IV secretory pathway VirB4
GOY13_00080	COG3704	protein secretion by the type IV secretion system
GOY13_00085	COG3704	protein secretion by the type IV secretion system
GOY13_00090	COG3704	protein secretion by the type IV secretion system
GOY13_00105	COG0742	ribosomal rna small subunit methyltransferase
GOY13_00110	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GOY13_00125	COG3088	subunit of a heme lyase
GOY13_00145	COG2885	chlorophyll binding
GOY13_00155	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOY13_00175	COG0326	Molecular chaperone. Has ATPase activity
GOY13_00185	COG0156	8-amino-7-oxononanoate synthase activity
GOY13_00205	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GOY13_00210	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GOY13_00220	COG0745	RESPONSE REGULATOR receiver
GOY13_00225	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GOY13_00250	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GOY13_00270	COG0756	dUTP diphosphatase activity
GOY13_00275	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GOY13_00280	COG0218	Necessary for normal cell division and for the maintenance of normal septation
GOY13_00285	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GOY13_00300	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GOY13_00305	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOY13_00310	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOY13_00330	COG1053	succinate dehydrogenase
GOY13_00340	COG0542	response to heat
GOY13_00345	COG1830	Aldolase
GOY13_00355	COG0167	dihydroorotate dehydrogenase activity
GOY13_00360	COG0571	ribonuclease III activity
GOY13_00370	COG0154	amidase activity
GOY13_00380	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOY13_00385	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOY13_00390	COG0142	geranyltranstransferase activity
GOY13_00400	COG0651	ATP synthesis coupled electron transport
GOY13_00405	COG0343	queuine tRNA-ribosyltransferase activity
GOY13_00420	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GOY13_00420	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GOY13_00425	COG0149	triose-phosphate isomerase activity
GOY13_00435	COG0688	phosphatidylethanolamine metabolic process
GOY13_00440	COG1183	phosphatidylcholine synthase activity
GOY13_00445	COG1115	amino acid carrier protein
GOY13_00450	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GOY13_00455	COG0632	four-way junction helicase activity
GOY13_00460	COG2255	four-way junction helicase activity
GOY13_00480	COG0196	riboflavin kinase activity
GOY13_00485	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GOY13_00490	COG0612	Peptidase, M16
GOY13_00495	COG0612	Peptidase, M16
GOY13_00500	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GOY13_00505	COG1863	multisubunit Na H antiporter MnhE subunit
GOY13_00510	COG0861	Integral membrane protein TerC family
GOY13_00515	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GOY13_00515	COG0519	Catalyzes the synthesis of GMP from XMP
GOY13_00520	COG0151	Belongs to the GarS family
GOY13_00525	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GOY13_00535	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOY13_00550	COG0436	Aminotransferase
GOY13_00555	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GOY13_00570	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
GOY13_00575	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GOY13_00580	COG0336	Belongs to the RNA methyltransferase TrmD family
GOY13_00585	COG0335	large ribosomal subunit rRNA binding
GOY13_00590	COG0581	inorganic phosphate transmembrane transporter activity
GOY13_00595	COG0047	phosphoribosylformylglycinamidine synthase activity
GOY13_00600	COG0321	lipoyl(octanoyl) transferase activity
GOY13_00620	COG0148	phosphopyruvate hydratase activity
GOY13_00630	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOY13_00635	COG0275	rRNA processing
GOY13_00640	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOY13_00645	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GOY13_00650	COG0254	rRNA binding
GOY13_00655	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOY13_00670	COG1230	cation diffusion facilitator family transporter
GOY13_00680	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOY13_00690	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOY13_00700	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOY13_00710	COG1862	Preprotein translocase
GOY13_00730	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOY13_00735	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GOY13_00755	COG0101	tRNA pseudouridine synthase activity
GOY13_00760	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOY13_00775	COG0539	negative regulation of cytoplasmic translation
GOY13_00790	COG0750	zinc metalloprotease
GOY13_00795	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOY13_00805	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GOY13_00810	COG0493	'glutamate synthase
GOY13_00810	COG0543	2 iron, 2 sulfur cluster binding
GOY13_00815	COG1007	ATP synthesis coupled electron transport
GOY13_00820	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOY13_00825	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
GOY13_00835	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GOY13_00850	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GOY13_00855	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GOY13_00870	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GOY13_00885	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GOY13_00895	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GOY13_00900	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOY13_00905	COG0723	plastoquinol--plastocyanin reductase activity
GOY13_00920	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
GOY13_00925	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOY13_00930	COG0736	holo-[acyl-carrier-protein] synthase activity
GOY13_00935	COG0442	prolyl-tRNA aminoacylation
GOY13_00945	COG0768	penicillin binding
GOY13_00970	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GOY13_00985	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GOY13_00990	COG0316	Belongs to the HesB IscA family
GOY13_00995	COG0822	iron-sulfur transferase activity
GOY13_01000	COG0552	protein localization to endoplasmic reticulum
GOY13_01005	COG0228	four-way junction DNA binding
GOY13_01010	COG0142	geranyltranstransferase activity
GOY13_01015	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GOY13_01025	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOY13_01035	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOY13_01040	COG3451	type IV secretory pathway VirB4
GOY13_01050	COG2070	2-Nitropropane dioxygenase
GOY13_01060	COG0612	Peptidase, M16
GOY13_01065	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOY13_01070	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOY13_01075	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOY13_01080	COG0653	protein targeting
GOY13_01085	COG1372	Participates in initiation and elongation during chromosome replication
GOY13_01085	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOY13_01115	COG0210	DNA helicase
GOY13_01120	COG0604	alcohol dehydrogenase
GOY13_01135	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOY13_01140	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
GOY13_01150	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
GOY13_01155	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOY13_01160	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GOY13_01170	COG0477	Major facilitator Superfamily
GOY13_01185	COG4133	protoheme IX ABC transporter activity
GOY13_01190	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOY13_01200	COG0259	pyridoxamine-phosphate oxidase activity
GOY13_01215	COG0649	NAD binding
GOY13_01235	COG0307	riboflavin synthase, alpha
GOY13_01240	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GOY13_01245	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOY13_01250	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GOY13_01255	COG0193	aminoacyl-tRNA hydrolase activity
GOY13_01280	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GOY13_01295	COG0505	Belongs to the CarA family
GOY13_01310	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOY13_01320	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GOY13_01325	COG0088	Forms part of the polypeptide exit tunnel
GOY13_01330	COG0089	rRNA binding
GOY13_01335	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GOY13_01340	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GOY13_01345	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GOY13_01350	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GOY13_01365	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GOY13_01370	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GOY13_01380	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GOY13_01385	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOY13_01390	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GOY13_01400	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GOY13_01405	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GOY13_01410	COG0200	Binds to the 23S rRNA
GOY13_01415	COG0201	protein transport
GOY13_01425	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GOY13_01430	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GOY13_01435	COG0202	RNA polymerase activity
GOY13_01440	COG0203	ribosomal protein L17
GOY13_01450	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
GOY13_01480	COG2009	succinate dehydrogenase
GOY13_01485	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
GOY13_01505	COG1295	ribonuclease BN
GOY13_01510	COG4221	oxidoreductase activity
GOY13_01515	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GOY13_01525	COG0052	Belongs to the universal ribosomal protein uS2 family
GOY13_01530	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GOY13_01535	COG0528	UMP kinase activity
GOY13_01540	COG0233	cytoplasmic translational termination
GOY13_01545	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GOY13_01560	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GOY13_01575	COG0574	Belongs to the PEP-utilizing enzyme family
GOY13_01575	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOY13_01580	COG1494	fructose-1,6-bisphosphatase
GOY13_01585	COG0012	GTP binding
GOY13_01590	COG0617	tRNA 3'-terminal CCA addition
GOY13_01595	COG0489	protein tyrosine kinase activity
GOY13_01600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOY13_01605	COG2814	Major facilitator Superfamily
GOY13_01610	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOY13_01620	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOY13_01630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOY13_01635	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GOY13_01640	COG0567	Dehydrogenase, E1 component
GOY13_01645	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GOY13_01655	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GOY13_01660	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GOY13_01660	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GOY13_01680	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GOY13_01685	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GOY13_01695	COG0280	phosphate acetyltransferase
GOY13_01695	COG0281	malic enzyme
GOY13_01700	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOY13_01705	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOY13_01725	COG0481	GTPase activity
GOY13_01730	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GOY13_01750	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOY13_01755	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GOY13_01760	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GOY13_01765	COG1121	(ABC) transporter
GOY13_01775	COG0105	UTP biosynthetic process
GOY13_01785	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
GOY13_01805	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GOY13_01825	COG0312	modulator of DNA gyrase
GOY13_01865	COG0330	HflC and HflK could
GOY13_01890	COG0459	protein refolding
GOY13_01895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOY13_01900	COG0354	folic acid binding
GOY13_01905	COG1322	Protein conserved in bacteria
GOY13_01910	COG1686	Belongs to the peptidase S11 family
GOY13_01915	COG0072	phenylalanine-tRNA ligase activity
GOY13_01915	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOY13_01935	COG0305	Participates in initiation and elongation during chromosome replication
GOY13_01940	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOY13_01945	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOY13_01955	COG0525	valine-tRNA ligase activity
GOY13_01960	COG0284	orotidine-5'-phosphate decarboxylase activity
GOY13_01985	COG0484	heat shock protein binding
GOY13_01990	COG0022	dehydrogenase e1 component
GOY13_01990	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOY13_01995	COG2239	Acts as a magnesium transporter
GOY13_02010	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GOY13_02015	COG0805	protein transport
GOY13_02040	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GOY13_02045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOY13_02065	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOY13_02070	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GOY13_02075	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOY13_02080	COG2226	methyltransferase
GOY13_02085	COG1132	(ABC) transporter
GOY13_02090	COG0018	arginyl-trna synthetase
GOY13_02100	COG0564	pseudouridine synthase activity
GOY13_02105	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GOY13_02120	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GOY13_02130	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
GOY13_02140	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GOY13_02150	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GOY13_02155	COG1074	ATP-dependent DNA helicase activity
GOY13_02165	COG0504	CTP synthase activity
GOY13_02170	COG0590	tRNA wobble adenosine to inosine editing
GOY13_02175	COG0477	Major facilitator Superfamily
GOY13_02185	COG0626	cystathionine gamma-synthase activity
GOY13_02190	COG0271	Belongs to the BolA IbaG family
GOY13_02200	COG1845	cytochrome c oxidase, subunit III
GOY13_02205	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GOY13_02215	COG0211	Belongs to the bacterial ribosomal protein bL27 family
GOY13_02225	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOY13_02235	COG1530	ribonuclease E activity
GOY13_02240	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GOY13_02255	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GOY13_02260	COG0359	binds to the 23S rRNA
GOY13_02265	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GOY13_02270	COG0360	Binds together with S18 to 16S ribosomal RNA
GOY13_02285	COG0400	carboxylic ester hydrolase activity
GOY13_02300	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GOY13_02310	COG0045	succinate-CoA ligase (ADP-forming) activity
GOY13_02320	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
GOY13_02330	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOY13_02335	COG1999	signal sequence binding
GOY13_02355	COG4974	Belongs to the 'phage' integrase family
GOY13_02365	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOY13_02370	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GOY13_02375	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GOY13_02380	COG0740	serine-type endopeptidase activity
GOY13_02385	COG0544	peptidyl-prolyl cis-trans isomerase activity
GOY13_02400	COG0189	ligase activity
GOY13_02405	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOY13_02410	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOY13_02425	COG2902	Dehydrogenase
GOY13_02430	COG0542	response to heat
GOY13_02435	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GOY13_02440	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GOY13_02465	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOY13_02470	COG2890	protein-(glutamine-N5) methyltransferase activity
GOY13_02475	COG1138	Cytochrome C-type biogenesis protein
GOY13_02490	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GOY13_02495	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOY13_02500	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GOY13_02505	COG0424	maF-like protein
GOY13_02510	COG1115	amino acid carrier protein
GOY13_02520	COG3505	Type IV secretory pathway VirD4
GOY13_02525	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
GOY13_02540	COG3736	Type IV secretory pathway, component VirB8
GOY13_02545	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GOY13_02545	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GOY13_02560	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOY13_02565	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
GOY13_02570	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GOY13_02580	COG0124	histidyl-tRNA synthetase
GOY13_02600	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GOY13_02625	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOY13_02640	COG0285	dihydrofolate synthase activity
GOY13_02645	COG0527	aspartate kinase activity
GOY13_02660	COG0494	nUDIX hydrolase
GOY13_02665	COG0084	hydrolase, TatD family'
GOY13_02675	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOY13_02685	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOY13_02710	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GOY13_02720	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GOY13_02725	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOY13_02735	COG1104	cysteine desulfurase activity
GOY13_02740	COG2945	thiolester hydrolase activity
GOY13_02755	COG0316	Belongs to the HesB IscA family
GOY13_02760	COG0232	Belongs to the dGTPase family. Type 2 subfamily
GOY13_02765	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOY13_02765	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOY13_02770	COG0445	tRNA wobble uridine modification
GOY13_02785	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOY13_02795	COG0333	Belongs to the bacterial ribosomal protein bL32 family
GOY13_02800	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
GOY13_02805	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
GOY13_02805	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
GOY13_02810	COG1007	ATP synthesis coupled electron transport
GOY13_02815	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOY13_02820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOY13_02825	COG0713	ATP synthesis coupled electron transport
GOY13_02830	COG0839	Belongs to the complex I subunit 6 family
GOY13_02840	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GOY13_02845	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
GOY13_02850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GOY13_02860	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GOY13_02865	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GOY13_02880	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
GOY13_02890	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GOY13_02905	COG1104	cysteine desulfurase activity
GOY13_02910	COG0113	porphobilinogen synthase activity
GOY13_02915	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOY13_02920	COG0629	single-stranded DNA binding
GOY13_02945	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOY13_02950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOY13_02955	COG1006	Multisubunit Na H antiporter MnhC subunit
GOY13_02965	COG2111	Na H antiporter
GOY13_02965	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOY13_02980	COG1758	RNA polymerase activity
GOY13_02990	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GOY13_03000	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GOY13_03005	COG0312	modulator of DNA gyrase
GOY13_03010	COG1278	Cold shock
GOY13_03020	COG0024	Methionine aminopeptidase
GOY13_03025	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOY13_03025	COG0085	RNA polymerase activity
GOY13_03030	COG0222	ribosome binding
GOY13_03035	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GOY13_03040	COG0081	regulation of translation
GOY13_03045	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GOY13_03065	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOY13_03070	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOY13_03080	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GOY13_03115	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOY13_03120	COG0356	it plays a direct role in the translocation of protons across the membrane
GOY13_03130	COG0495	leucyl-tRNA aminoacylation
GOY13_03145	COG1160	GTP binding
GOY13_03150	COG0242	peptide deformylase activity
GOY13_03155	COG1573	uracil-dna glycosylase
GOY13_03165	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
GOY13_03175	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GOY13_03180	COG0194	GDP metabolic process
GOY13_03200	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GOY13_03205	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
GOY13_03215	COG0237	dephospho-CoA kinase activity
GOY13_03220	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
GOY13_03235	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
GOY13_03240	COG1034	ATP synthesis coupled electron transport
GOY13_03255	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GOY13_03260	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GOY13_03275	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOY13_03280	COG4974	Belongs to the 'phage' integrase family
GOY13_03285	COG0492	ferredoxin-NADP+ reductase activity
GOY13_03290	COG0450	alkyl hydroperoxide reductase
GOY13_03295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOY13_03315	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOY13_03335	COG2171	N-acyltransferase activity
GOY13_03340	COG0772	Belongs to the SEDS family
GOY13_03345	COG0651	ATP synthesis coupled electron transport
GOY13_03360	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GOY13_03370	COG3932	Exopolysaccharide synthesis, ExoD
GOY13_03375	COG0215	cysteine-tRNA ligase activity
GOY13_03385	COG0126	phosphoglycerate kinase activity
GOY13_03390	COG0492	ferredoxin-NADP+ reductase activity
GOY13_03400	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GOY13_03405	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GOY13_03410	COG0573	inorganic phosphate transmembrane transporter activity
GOY13_03415	COG0230	Belongs to the bacterial ribosomal protein bL34 family
GOY13_03420	COG0594	ribonuclease P activity
GOY13_03450	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOY13_03460	COG0751	glycine-tRNA ligase activity
GOY13_03465	COG0752	glycyl-tRNA synthetase alpha subunit
GOY13_03475	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity