locus-tag class description EA652_0001 PF11638 DnaA N-terminal domain EA652_0001 PF00308 Bacterial dnaA protein EA652_0001 PF08299 Bacterial dnaA protein helix-turn-helix EA652_0004 PF00925 GTP cyclohydrolase II EA652_0005 PF04335 VirB8 protein EA652_0008 PF00437 Type II/IV secretion system protein EA652_0009 PF02534 Type IV secretory system Conjugative DNA transfer EA652_0011 PF17827 PrmC N-terminal domain EA652_0011 PF02390 Putative methyltransferase EA652_0011 PF05175 Methyltransferase small domain EA652_0012 PF00164 Ribosomal protein S12/S23 EA652_0013 PF00177 Ribosomal protein S7p/S5e EA652_0014 PF14492 Elongation Factor G, domain II EA652_0014 PF03144 Elongation factor Tu domain 2 EA652_0014 PF00009 Elongation factor Tu GTP binding domain EA652_0014 PF03764 Elongation factor G, domain IV EA652_0014 PF00679 Elongation factor G C-terminus EA652_0015 PF03144 Elongation factor Tu domain 2 EA652_0015 PF03143 Elongation factor Tu C-terminal domain EA652_0015 PF00009 Elongation factor Tu GTP binding domain EA652_0017 PF02357 Transcription termination factor nusG EA652_0017 PF00467 KOW motif EA652_0018 PF03946 Ribosomal protein L11, N-terminal domain EA652_0018 PF00298 Ribosomal protein L11, RNA binding domain EA652_0019 PF00687 Ribosomal protein L1p/L10e family EA652_0020 PF00466 Ribosomal protein L10 EA652_0022 PF00623 RNA polymerase Rpb1, domain 2 EA652_0022 PF04983 RNA polymerase Rpb1, domain 3 EA652_0022 PF04998 RNA polymerase Rpb1, domain 5 EA652_0022 PF04563 RNA polymerase beta subunit EA652_0022 PF04561 RNA polymerase Rpb2, domain 2 EA652_0022 PF04565 RNA polymerase Rpb2, domain 3 EA652_0022 PF10385 RNA polymerase beta subunit external 1 domain EA652_0022 PF00562 RNA polymerase Rpb2, domain 6 EA652_0022 PF04560 RNA polymerase Rpb2, domain 7 EA652_0022 PF04997 RNA polymerase Rpb1, domain 1 EA652_0022 PF05000 RNA polymerase Rpb1, domain 4 EA652_0023 PF01207 Dihydrouridine synthase (Dus) EA652_0025 PF02403 Seryl-tRNA synthetase N-terminal domain EA652_0025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA652_0026 PF02843 Phosphoribosylglycinamide synthetase, C domain EA652_0026 PF02844 Phosphoribosylglycinamide synthetase, N domain EA652_0026 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EA652_0029 PF14572 Phosphoribosyl synthetase-associated domain EA652_0029 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EA652_0030 PF02686 Glu-tRNAGln amidotransferase C subunit EA652_0031 PF04052 TolB amino-terminal domain EA652_0031 PF07676 WD40-like Beta Propeller Repeat EA652_0032 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EA652_0032 PF12706 Beta-lactamase superfamily domain EA652_0032 PF17770 Ribonuclease J C-terminal domain EA652_0033 PF00684 DnaJ central domain EA652_0033 PF01556 DnaJ C terminal domain EA652_0033 PF00226 DnaJ domain EA652_0042 PF02789 Cytosol aminopeptidase family, N-terminal domain EA652_0042 PF00883 Cytosol aminopeptidase family, catalytic domain EA652_0044 PF00216 Bacterial DNA-binding protein EA652_0046 PF01551 Peptidase family M23 EA652_0047 PF08264 Anticodon-binding domain of tRNA EA652_0047 PF00133 tRNA synthetases class I (I, L, M and V) EA652_0047 PF13603 Leucyl-tRNA synthetase, Domain 2 EA652_0047 PF09334 tRNA synthetases class I (M) EA652_0051 PF13333 Integrase core domain EA652_0051 PF00665 Integrase core domain EA652_0051 PF13276 HTH-like domain EA652_0054 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EA652_0056 PF00380 Ribosomal protein S9/S16 EA652_0057 PF00572 Ribosomal protein L13 EA652_0059 PF10691 Protein of unknown function (DUF2497) EA652_0060 PF01728 FtsJ-like methyltransferase EA652_0068 PF13358 DDE superfamily endonuclease EA652_0072 PF10609 NUBPL iron-transfer P-loop NTPase EA652_0073 PF01494 FAD binding domain EA652_0075 PF01195 Peptidyl-tRNA hydrolase EA652_0076 PF01386 Ribosomal L25p family EA652_0076 PF14693 Ribosomal protein TL5, C-terminal domain EA652_0079 PF01795 MraW methylase family EA652_0080 PF07690 Major Facilitator Superfamily EA652_0080 PF00083 Sugar (and other) transporter EA652_0081 PF00557 Metallopeptidase family M24 EA652_0082 PF02491 SHS2 domain inserted in FTSA EA652_0083 PF01327 Polypeptide deformylase EA652_0084 PF03167 Uracil DNA glycosylase superfamily EA652_0086 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EA652_0086 PF00384 Molybdopterin oxidoreductase EA652_0086 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EA652_0087 PF00146 NADH dehydrogenase EA652_0088 PF00490 Delta-aminolevulinic acid dehydratase EA652_0090 PF02091 Glycyl-tRNA synthetase alpha subunit EA652_0091 PF05746 DALR anticodon binding domain EA652_0091 PF02092 Glycyl-tRNA synthetase beta subunit EA652_0092 PF08459 UvrC Helix-hairpin-helix N-terminal EA652_0092 PF02151 UvrB/uvrC motif EA652_0092 PF01541 GIY-YIG catalytic domain EA652_0094 PF08402 TOBE domain EA652_0094 PF00005 ABC transporter EA652_0095 PF02416 mttA/Hcf106 family EA652_0097 PF06055 Exopolysaccharide synthesis, ExoD EA652_0098 PF09190 DALR domain EA652_0098 PF01406 tRNA synthetases class I (C) catalytic domain EA652_0101 PF02637 GatB domain EA652_0101 PF02934 GatB/GatE catalytic domain EA652_0104 PF03652 Holliday junction resolvase EA652_0105 PF02075 Crossover junction endodeoxyribonuclease RuvC EA652_0106 PF00510 Cytochrome c oxidase subunit III EA652_0108 PF03070 TENA/THI-4/PQQC family EA652_0109 PF02772 S-adenosylmethionine synthetase, central domain EA652_0109 PF02773 S-adenosylmethionine synthetase, C-terminal domain EA652_0109 PF00438 S-adenosylmethionine synthetase, N-terminal domain EA652_0111 PF01016 Ribosomal L27 protein EA652_0112 PF00829 Ribosomal prokaryotic L21 protein EA652_0113 PF00132 Bacterial transferase hexapeptide (six repeats) EA652_0113 PF14602 Hexapeptide repeat of succinyl-transferase EA652_0113 PF12804 MobA-like NTP transferase domain EA652_0114 PF01409 tRNA synthetases class II core domain (F) EA652_0114 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EA652_0116 PF00677 Lumazine binding domain EA652_0121 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EA652_0121 PF17854 FtsK alpha domain EA652_0121 PF09397 Ftsk gamma domain EA652_0121 PF01580 FtsK/SpoIIIE family EA652_0123 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0127 PF04551 GcpE protein EA652_0128 PF01609 Transposase DDE domain EA652_0132 PF00665 Integrase core domain EA652_0132 PF13276 HTH-like domain EA652_0132 PF13333 Integrase core domain EA652_0134 PF01751 Toprim domain EA652_0134 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA652_0134 PF00204 DNA gyrase B EA652_0134 PF00986 DNA gyrase B subunit, carboxyl terminus EA652_0135 PF02630 SCO1/SenC EA652_0136 PF00929 Exonuclease EA652_0138 PF02556 Preprotein translocase subunit SecB EA652_0139 PF00694 Aconitase C-terminal domain EA652_0139 PF00330 Aconitase family (aconitate hydratase) EA652_0140 PF00171 Aldehyde dehydrogenase family EA652_0140 PF01619 Proline dehydrogenase EA652_0140 PF14850 DNA-binding domain of Proline dehydrogenase EA652_0140 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EA652_0143 PF00893 Small Multidrug Resistance protein EA652_0144 PF00893 Small Multidrug Resistance protein EA652_0145 PF00768 D-alanyl-D-alanine carboxypeptidase EA652_0145 PF07943 Penicillin-binding protein 5, C-terminal domain EA652_0146 PF08478 POTRA domain, FtsQ-type EA652_0146 PF03799 Cell division protein FtsQ EA652_0147 PF07478 D-ala D-ala ligase C-terminus EA652_0147 PF01820 D-ala D-ala ligase N-terminus EA652_0149 PF00037 4Fe-4S binding domain EA652_0149 PF11953 Domain of unknown function (DUF3470) EA652_0150 PF02481 DNA recombination-mediator protein A EA652_0150 PF17782 DprA winged helix domain EA652_0151 PF00121 Triosephosphate isomerase EA652_0153 PF00398 Ribosomal RNA adenine dimethylase EA652_0154 PF00571 CBS domain EA652_0154 PF00478 IMP dehydrogenase / GMP reductase domain EA652_0158 PF02355 Protein export membrane protein EA652_0167 PF01121 Dephospho-CoA kinase EA652_0168 PF00570 HRDC domain EA652_0168 PF01612 3'-5' exonuclease EA652_0170 PF05192 MutS domain III EA652_0170 PF05190 MutS family domain IV EA652_0170 PF01624 MutS domain I EA652_0170 PF05188 MutS domain II EA652_0170 PF00488 MutS domain V EA652_0173 PF00571 CBS domain EA652_0173 PF03741 Integral membrane protein TerC family EA652_0173 PF03471 Transporter associated domain EA652_0174 PF02540 NAD synthase EA652_0174 PF00117 Glutamine amidotransferase class-I EA652_0174 PF00958 GMP synthase C terminal domain EA652_0175 PF03477 ATP cone domain EA652_0175 PF02867 Ribonucleotide reductase, barrel domain EA652_0175 PF00317 Ribonucleotide reductase, all-alpha domain EA652_0176 PF01209 ubiE/COQ5 methyltransferase family EA652_0182 PF00528 Binding-protein-dependent transport system inner membrane component EA652_0183 PF02874 ATP synthase alpha/beta family, beta-barrel domain EA652_0183 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA652_0184 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EA652_0193 PF00596 Class II Aldolase and Adducin N-terminal domain EA652_0195 PF00814 Glycoprotease family EA652_0197 PF00268 Ribonucleotide reductase, small chain EA652_0203 PF02565 Recombination protein O C terminal EA652_0203 PF11967 Recombination protein O N terminal EA652_0204 PF00990 Diguanylate cyclase, GGDEF domain EA652_0204 PF00072 Response regulator receiver domain EA652_0206 PF05088 Bacterial NAD-glutamate dehydrogenase EA652_0207 PF10431 C-terminal, D2-small domain, of ClpB protein EA652_0207 PF02861 Clp amino terminal domain, pathogenicity island component EA652_0207 PF17871 AAA lid domain EA652_0207 PF07724 AAA domain (Cdc48 subfamily) EA652_0207 PF00004 ATPase family associated with various cellular activities (AAA) EA652_0210 PF00156 Phosphoribosyl transferase domain EA652_0211 PF00375 Sodium:dicarboxylate symporter family EA652_0212 PF01979 Amidohydrolase family EA652_0214 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EA652_0214 PF01578 Cytochrome C assembly protein EA652_0216 PF02355 Protein export membrane protein EA652_0216 PF07549 SecD/SecF GG Motif EA652_0219 PF14849 YidC periplasmic domain EA652_0219 PF02096 60Kd inner membrane protein EA652_0220 PF00885 6,7-dimethyl-8-ribityllumazine synthase EA652_0221 PF01029 NusB family EA652_0224 PF00692 dUTPase EA652_0225 PF00696 Amino acid kinase family EA652_0226 PF01926 50S ribosome-binding GTPase EA652_0227 PF03462 PCRF domain EA652_0227 PF00472 RF-1 domain EA652_0228 PF07690 Major Facilitator Superfamily EA652_0235 PF02646 RmuC family EA652_0236 PF01609 Transposase DDE domain EA652_0237 PF01609 Transposase DDE domain EA652_0238 PF01425 Amidase EA652_0239 PF00919 Uncharacterized protein family UPF0004 EA652_0239 PF04055 Radical SAM superfamily EA652_0244 PF03330 Lytic transglycolase EA652_0245 PF02875 Mur ligase family, glutamate ligase domain EA652_0245 PF01225 Mur ligase family, catalytic domain EA652_0245 PF08245 Mur ligase middle domain EA652_0246 PF00113 Enolase, C-terminal TIM barrel domain EA652_0246 PF03952 Enolase, N-terminal domain EA652_0247 PF01926 50S ribosome-binding GTPase EA652_0247 PF01018 GTP1/OBG EA652_0248 PF00206 Lyase EA652_0248 PF10415 Fumarase C C-terminus EA652_0250 PF00462 Glutaredoxin EA652_0252 PF01515 Phosphate acetyl/butaryl transferase EA652_0252 PF00390 Malic enzyme, N-terminal domain EA652_0252 PF03949 Malic enzyme, NAD binding domain EA652_0253 PF01066 CDP-alcohol phosphatidyltransferase EA652_0257 PF13525 Outer membrane lipoprotein EA652_0258 PF01709 Transcriptional regulator EA652_0259 PF01476 LysM domain EA652_0259 PF01551 Peptidase family M23 EA652_0259 PF08525 Opacity-associated protein A N-terminal motif EA652_0265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EA652_0265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EA652_0266 PF00902 Sec-independent protein translocase protein (TatC) EA652_0267 PF02863 Arginine repressor, C-terminal domain EA652_0267 PF01316 Arginine repressor, DNA binding domain EA652_0268 PF00497 Bacterial extracellular solute-binding proteins, family 3 EA652_0269 PF00528 Binding-protein-dependent transport system inner membrane component EA652_0270 PF00005 ABC transporter EA652_0274 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EA652_0277 PF01434 Peptidase family M41 EA652_0277 PF06480 FtsH Extracellular EA652_0277 PF00004 ATPase family associated with various cellular activities (AAA) EA652_0277 PF17862 AAA+ lid domain EA652_0279 PF08264 Anticodon-binding domain of tRNA EA652_0279 PF00133 tRNA synthetases class I (I, L, M and V) EA652_0283 PF00117 Glutamine amidotransferase class-I EA652_0283 PF06418 CTP synthase N-terminus EA652_0284 PF14437 MafB19-like deaminase EA652_0288 PF07690 Major Facilitator Superfamily EA652_0288 PF00083 Sugar (and other) transporter EA652_0291 PF01434 Peptidase family M41 EA652_0291 PF17862 AAA+ lid domain EA652_0291 PF00004 ATPase family associated with various cellular activities (AAA) EA652_0292 PF02780 Transketolase, C-terminal domain EA652_0292 PF02779 Transketolase, pyrimidine binding domain EA652_0292 PF00364 Biotin-requiring enzyme EA652_0295 PF00009 Elongation factor Tu GTP binding domain EA652_0295 PF06421 GTP-binding protein LepA C-terminus EA652_0295 PF14492 Elongation Factor G, domain II EA652_0295 PF00679 Elongation factor G C-terminus EA652_0295 PF03144 Elongation factor Tu domain 2 EA652_0301 PF01743 Poly A polymerase head domain EA652_0301 PF12627 Probable RNA and SrmB- binding site of polymerase A EA652_0301 PF13735 tRNA nucleotidyltransferase domain 2 putative EA652_0303 PF06071 Protein of unknown function (DUF933) EA652_0303 PF01926 50S ribosome-binding GTPase EA652_0306 PF00625 Guanylate kinase EA652_0308 PF02910 Fumarate reductase flavoprotein C-term EA652_0308 PF00890 FAD binding domain EA652_0309 PF00749 tRNA synthetases class I (E and Q), catalytic domain EA652_0311 PF00289 Biotin carboxylase, N-terminal domain EA652_0311 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA652_0311 PF02785 Biotin carboxylase C-terminal domain EA652_0312 PF02628 Cytochrome oxidase assembly protein EA652_0316 PF00137 ATP synthase subunit C EA652_0317 PF00119 ATP synthase A chain EA652_0319 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EA652_0319 PF03483 B3/4 domain EA652_0319 PF01588 Putative tRNA binding domain EA652_0319 PF03147 Ferredoxin-fold anticodon binding domain EA652_0319 PF03484 tRNA synthetase B5 domain EA652_0321 PF00133 tRNA synthetases class I (I, L, M and V) EA652_0321 PF08264 Anticodon-binding domain of tRNA EA652_0322 PF00854 POT family EA652_0323 PF01938 TRAM domain EA652_0323 PF04055 Radical SAM superfamily EA652_0323 PF00919 Uncharacterized protein family UPF0004 EA652_0325 PF00676 Dehydrogenase E1 component EA652_0326 PF01479 S4 domain EA652_0326 PF00849 RNA pseudouridylate synthase EA652_0327 PF00083 Sugar (and other) transporter EA652_0327 PF08946 Osmosensory transporter coiled coil EA652_0328 PF02938 GAD domain EA652_0328 PF01336 OB-fold nucleic acid binding domain EA652_0328 PF00152 tRNA synthetases class II (D, K and N) EA652_0330 PF00005 ABC transporter EA652_0334 PF13333 Integrase core domain EA652_0334 PF13276 HTH-like domain EA652_0334 PF00665 Integrase core domain EA652_0338 PF01467 Cytidylyltransferase-like EA652_0341 PF01255 Putative undecaprenyl diphosphate synthase EA652_0342 PF01765 Ribosome recycling factor EA652_0343 PF00696 Amino acid kinase family EA652_0344 PF00889 Elongation factor TS EA652_0345 PF00318 Ribosomal protein S2 EA652_0347 PF02699 Preprotein translocase subunit EA652_0348 PF01380 SIS domain EA652_0351 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0355 PF01565 FAD binding domain EA652_0355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EA652_0356 PF03900 Porphobilinogen deaminase, C-terminal domain EA652_0356 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EA652_0357 PF00364 Biotin-requiring enzyme EA652_0357 PF02817 e3 binding domain EA652_0357 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EA652_0361 PF13358 DDE superfamily endonuclease EA652_0365 PF01043 SecA preprotein cross-linking domain EA652_0365 PF07517 SecA DEAD-like domain EA652_0365 PF02810 SEC-C motif EA652_0365 PF07516 SecA Wing and Scaffold domain EA652_0367 PF00923 Transaldolase/Fructose-6-phosphate aldolase EA652_0371 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0374 PF00005 ABC transporter EA652_0374 PF00664 ABC transporter transmembrane region EA652_0380 PF00750 tRNA synthetases class I (R) EA652_0380 PF05746 DALR anticodon binding domain EA652_0380 PF03485 Arginyl tRNA synthetase N terminal domain EA652_0381 PF00665 Integrase core domain EA652_0381 PF13276 HTH-like domain EA652_0381 PF13333 Integrase core domain EA652_0382 PF01527 Transposase EA652_0383 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EA652_0384 PF00202 Aminotransferase class-III EA652_0385 PF01595 Cyclin M transmembrane N-terminal domain EA652_0385 PF03471 Transporter associated domain EA652_0385 PF00571 CBS domain EA652_0386 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EA652_0387 PF02441 Flavoprotein EA652_0388 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EA652_0388 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EA652_0393 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0397 PF01098 Cell cycle protein EA652_0398 PF01209 ubiE/COQ5 methyltransferase family EA652_0399 PF04055 Radical SAM superfamily EA652_0399 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EA652_0400 PF00830 Ribosomal L28 family EA652_0402 PF04384 Iron-sulphur cluster assembly EA652_0404 PF00163 Ribosomal protein S4/S9 N-terminal domain EA652_0404 PF01479 S4 domain EA652_0405 PF02779 Transketolase, pyrimidine binding domain EA652_0405 PF00456 Transketolase, thiamine diphosphate binding domain EA652_0405 PF02780 Transketolase, C-terminal domain EA652_0411 PF13358 DDE superfamily endonuclease EA652_0416 PF07690 Major Facilitator Superfamily EA652_0418 PF00692 dUTPase EA652_0421 PF02386 Cation transport protein EA652_0422 PF00571 CBS domain EA652_0422 PF03448 MgtE intracellular N domain EA652_0422 PF01769 Divalent cation transporter EA652_0423 PF00472 RF-1 domain EA652_0423 PF03462 PCRF domain EA652_0424 PF13276 HTH-like domain EA652_0424 PF13333 Integrase core domain EA652_0424 PF00665 Integrase core domain EA652_0427 PF00005 ABC transporter EA652_0428 PF01113 Dihydrodipicolinate reductase, N-terminus EA652_0428 PF05173 Dihydrodipicolinate reductase, C-terminus EA652_0432 PF00950 ABC 3 transport family EA652_0434 PF08544 GHMP kinases C terminal EA652_0434 PF00288 GHMP kinases N terminal domain EA652_0435 PF12705 PD-(D/E)XK nuclease superfamily EA652_0435 PF13361 UvrD-like helicase C-terminal domain EA652_0435 PF00580 UvrD/REP helicase N-terminal domain EA652_0437 PF04002 RadC-like JAB domain EA652_0438 PF06271 RDD family EA652_0440 PF00772 DnaB-like helicase N terminal domain EA652_0440 PF03796 DnaB-like helicase C terminal domain EA652_0443 PF09334 tRNA synthetases class I (M) EA652_0443 PF08264 Anticodon-binding domain of tRNA EA652_0445 PF08241 Methyltransferase domain EA652_0446 PF01807 CHC2 zinc finger EA652_0446 PF08275 DNA primase catalytic core, N-terminal domain EA652_0446 PF13662 Toprim domain EA652_0447 PF02661 Fic/DOC family EA652_0447 PF13784 Fic/DOC family N-terminal EA652_0448 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA652_0449 PF13333 Integrase core domain EA652_0449 PF13276 HTH-like domain EA652_0449 PF00665 Integrase core domain EA652_0453 PF03618 Kinase/pyrophosphorylase EA652_0454 PF01578 Cytochrome C assembly protein EA652_0455 PF00709 Adenylosuccinate synthetase EA652_0458 PF01176 Translation initiation factor 1A / IF-1 EA652_0459 PF02545 Maf-like protein EA652_0461 PF01235 Sodium:alanine symporter family EA652_0466 PF00118 TCP-1/cpn60 chaperonin family EA652_0467 PF00166 Chaperonin 10 Kd subunit EA652_0468 PF01571 Aminomethyltransferase folate-binding domain EA652_0469 PF17768 RecJ OB domain EA652_0469 PF02272 DHHA1 domain EA652_0469 PF01368 DHH family EA652_0471 PF00115 Cytochrome C and Quinol oxidase polypeptide I EA652_0473 PF00005 ABC transporter EA652_0473 PF00664 ABC transporter transmembrane region EA652_0474 PF05362 Lon protease (S16) C-terminal proteolytic domain EA652_0474 PF00004 ATPase family associated with various cellular activities (AAA) EA652_0474 PF02190 ATP-dependent protease La (LON) substrate-binding domain EA652_0475 PF06689 ClpX C4-type zinc finger EA652_0475 PF10431 C-terminal, D2-small domain, of ClpB protein EA652_0475 PF07724 AAA domain (Cdc48 subfamily) EA652_0476 PF00574 Clp protease EA652_0477 PF05697 Bacterial trigger factor protein (TF) EA652_0477 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EA652_0477 PF05698 Bacterial trigger factor protein (TF) C-terminus EA652_0480 PF04972 BON domain EA652_0481 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EA652_0481 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EA652_0482 PF03033 Glycosyltransferase family 28 N-terminal domain EA652_0482 PF04101 Glycosyltransferase family 28 C-terminal domain EA652_0484 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_0484 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA652_0491 PF00075 RNase H EA652_0492 PF01040 UbiA prenyltransferase family EA652_0493 PF00115 Cytochrome C and Quinol oxidase polypeptide I EA652_0494 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EA652_0494 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EA652_0495 PF13276 HTH-like domain EA652_0495 PF13333 Integrase core domain EA652_0495 PF00665 Integrase core domain EA652_0497 PF00529 HlyD membrane-fusion protein of T1SS EA652_0497 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EA652_0501 PF00925 GTP cyclohydrolase II EA652_0501 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EA652_0502 PF03449 Transcription elongation factor, N-terminal EA652_0502 PF01272 Transcription elongation factor, GreA/GreB, C-term EA652_0503 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA652_0503 PF00306 ATP synthase alpha/beta chain, C terminal domain EA652_0503 PF02874 ATP synthase alpha/beta family, beta-barrel domain EA652_0504 PF00213 ATP synthase delta (OSCP) subunit EA652_0505 PF02021 Uncharacterised protein family UPF0102 EA652_0506 PF01196 Ribosomal protein L17 EA652_0507 PF01000 RNA polymerase Rpb3/RpoA insert domain EA652_0507 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EA652_0507 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EA652_0508 PF00411 Ribosomal protein S11 EA652_0509 PF00416 Ribosomal protein S13/S18 EA652_0511 PF00344 SecY translocase EA652_0512 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EA652_0513 PF00333 Ribosomal protein S5, N-terminal domain EA652_0513 PF03719 Ribosomal protein S5, C-terminal domain EA652_0514 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EA652_0515 PF00347 Ribosomal protein L6 EA652_0516 PF00410 Ribosomal protein S8 EA652_0517 PF00253 Ribosomal protein S14p/S29e EA652_0518 PF00281 Ribosomal protein L5 EA652_0518 PF00673 ribosomal L5P family C-terminus EA652_0519 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EA652_0520 PF00238 Ribosomal protein L14p/L23e EA652_0521 PF00366 Ribosomal protein S17 EA652_0522 PF00831 Ribosomal L29 protein EA652_0523 PF00252 Ribosomal protein L16p/L10e EA652_0524 PF00189 Ribosomal protein S3, C-terminal domain EA652_0524 PF07650 KH domain EA652_0525 PF00237 Ribosomal protein L22p/L17e EA652_0526 PF00203 Ribosomal protein S19 EA652_0527 PF03947 Ribosomal Proteins L2, C-terminal domain EA652_0527 PF00181 Ribosomal Proteins L2, RNA binding domain EA652_0528 PF00276 Ribosomal protein L23 EA652_0529 PF00573 Ribosomal protein L4/L1 family EA652_0530 PF00297 Ribosomal protein L3 EA652_0531 PF00338 Ribosomal protein S10p/S20e EA652_0532 PF03143 Elongation factor Tu C-terminal domain EA652_0532 PF03144 Elongation factor Tu domain 2 EA652_0532 PF00009 Elongation factor Tu GTP binding domain EA652_0535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EA652_0535 PF00117 Glutamine amidotransferase class-I EA652_0538 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EA652_0541 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EA652_0541 PF02896 PEP-utilising enzyme, TIM barrel domain EA652_0541 PF00391 PEP-utilising enzyme, mobile domain EA652_0543 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0572 PF00023 Ankyrin repeat EA652_0574 PF18755 Restriction Enzyme Adenine Methylase Associated EA652_0574 PF01555 DNA methylase EA652_0577 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0577 PF01348 Type II intron maturase EA652_0580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EA652_0580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EA652_0580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EA652_0580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EA652_0583 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_0584 PF10417 C-terminal domain of 1-Cys peroxiredoxin EA652_0584 PF00578 AhpC/TSA family EA652_0586 PF00462 Glutaredoxin EA652_0587 PF01687 Riboflavin kinase EA652_0587 PF06574 FAD synthetase EA652_0588 PF01252 Signal peptidase (SPase) II EA652_0589 PF00675 Insulinase (Peptidase family M16) EA652_0589 PF05193 Peptidase M16 inactive domain EA652_0591 PF00551 Formyl transferase EA652_0595 PF01668 SmpB protein EA652_0596 PF01790 Prolipoprotein diacylglyceryl transferase EA652_0597 PF00005 ABC transporter EA652_0597 PF00664 ABC transporter transmembrane region EA652_0604 PF00436 Single-strand binding protein family EA652_0605 PF00701 Dihydrodipicolinate synthetase family EA652_0606 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EA652_0606 PF03120 NAD-dependent DNA ligase OB-fold domain EA652_0606 PF01653 NAD-dependent DNA ligase adenylation domain EA652_0606 PF00533 BRCA1 C Terminus (BRCT) domain EA652_0606 PF12826 Helix-hairpin-helix motif EA652_0607 PF00749 tRNA synthetases class I (E and Q), catalytic domain EA652_0608 PF07733 Bacterial DNA polymerase III alpha NTPase domain EA652_0608 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EA652_0608 PF02811 PHP domain EA652_0608 PF14579 Helix-hairpin-helix motif EA652_0609 PF01250 Ribosomal protein S6 EA652_0610 PF01084 Ribosomal protein S18 EA652_0611 PF03948 Ribosomal protein L9, C-terminal domain EA652_0611 PF01281 Ribosomal protein L9, N-terminal domain EA652_0612 PF10397 Adenylosuccinate lyase C-terminus EA652_0612 PF00206 Lyase EA652_0614 PF13685 Iron-containing alcohol dehydrogenase EA652_0615 PF07687 Peptidase dimerisation domain EA652_0615 PF01546 Peptidase family M20/M25/M40 EA652_0617 PF10576 Iron-sulfur binding domain of endonuclease III EA652_0617 PF00633 Helix-hairpin-helix motif EA652_0617 PF00730 HhH-GPD superfamily base excision DNA repair protein EA652_0619 PF18324 Hypothetical protein TT1725 EA652_0619 PF00180 Isocitrate/isopropylmalate dehydrogenase EA652_0622 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EA652_0622 PF07498 Rho termination factor, N-terminal domain EA652_0622 PF07497 Rho termination factor, RNA-binding domain EA652_0629 PF17761 DUF1016 N-terminal domain EA652_0629 PF06250 YhcG PDDEXK nuclease domain EA652_0649 PF17482 Phage tail sheath C-terminal domain EA652_0649 PF04984 Phage tail sheath protein subtilisin-like domain EA652_0662 PF12796 Ankyrin repeats (3 copies) EA652_0666 PF00011 Hsp20/alpha crystallin family EA652_0686 PF04002 RadC-like JAB domain EA652_0688 PF01522 Polysaccharide deacetylase EA652_0688 PF00457 Glycosyl hydrolases family 11 EA652_0688 PF03422 Carbohydrate binding module (family 6) EA652_0689 PF03717 Penicillin-binding Protein dimerisation domain EA652_0689 PF00905 Penicillin binding protein transpeptidase domain EA652_0695 PF14602 Hexapeptide repeat of succinyl-transferase EA652_0695 PF00132 Bacterial transferase hexapeptide (six repeats) EA652_0695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EA652_0697 PF00834 Ribulose-phosphate 3 epimerase family EA652_0700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EA652_0700 PF01872 RibD C-terminal domain EA652_0701 PF13286 Phosphohydrolase-associated domain EA652_0701 PF01966 HD domain EA652_0702 PF01521 Iron-sulphur cluster biosynthesis EA652_0703 PF00005 ABC transporter EA652_0705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EA652_0706 PF00266 Aminotransferase class-V EA652_0708 PF00814 Glycoprotease family EA652_0715 PF02899 Phage integrase, N-terminal SAM-like domain EA652_0715 PF00589 Phage integrase family EA652_0716 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_0716 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EA652_0725 PF01926 50S ribosome-binding GTPase EA652_0725 PF07650 KH domain EA652_0727 PF02322 Cytochrome bd terminal oxidase subunit II EA652_0728 PF01654 Cytochrome bd terminal oxidase subunit I EA652_0729 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EA652_0729 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EA652_0730 PF05193 Peptidase M16 inactive domain EA652_0730 PF00675 Insulinase (Peptidase family M16) EA652_0732 PF01702 Queuine tRNA-ribosyltransferase EA652_0735 PF00486 Transcriptional regulatory protein, C terminal EA652_0735 PF00072 Response regulator receiver domain EA652_0736 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EA652_0736 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EA652_0737 PF04608 Phosphatidylglycerophosphatase A EA652_0740 PF13085 2Fe-2S iron-sulfur cluster binding domain EA652_0741 PF02130 Uncharacterized protein family UPF0054 EA652_0744 PF00091 Tubulin/FtsZ family, GTPase domain EA652_0744 PF12327 FtsZ family, C-terminal domain EA652_0746 PF13335 Magnesium chelatase, subunit ChlI C-terminal EA652_0746 PF01078 Magnesium chelatase, subunit ChlI EA652_0759 PF00886 Ribosomal protein S16 EA652_0760 PF00348 Polyprenyl synthetase EA652_0761 PF01025 GrpE EA652_0762 PF00579 tRNA synthetases class I (W and Y) EA652_0764 PF00034 Cytochrome c EA652_0769 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA652_0769 PF03129 Anticodon binding domain EA652_0770 PF01648 4'-phosphopantetheinyl transferase superfamily EA652_0771 PF00361 Proton-conducting membrane transporter EA652_0771 PF13244 Domain of unknown function (DUF4040) EA652_0771 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EA652_0776 PF01300 Telomere recombination EA652_0780 PF17191 RecG wedge domain EA652_0780 PF00270 DEAD/DEAH box helicase EA652_0780 PF00271 Helicase conserved C-terminal domain EA652_0789 PF01145 SPFH domain / Band 7 family EA652_0790 PF01145 SPFH domain / Band 7 family EA652_0791 PF13180 PDZ domain EA652_0798 PF02151 UvrB/uvrC motif EA652_0798 PF04851 Type III restriction enzyme, res subunit EA652_0798 PF00271 Helicase conserved C-terminal domain EA652_0798 PF12344 Ultra-violet resistance protein B EA652_0798 PF17757 UvrB interaction domain EA652_0803 PF03918 Cytochrome C biogenesis protein EA652_0805 PF00111 2Fe-2S iron-sulfur cluster binding domain EA652_0806 PF08245 Mur ligase middle domain EA652_0812 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EA652_0813 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EA652_0814 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EA652_0815 PF04610 TrbL/VirB6 plasmid conjugal transfer protein EA652_0816 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EA652_0818 PF01921 tRNA synthetases class I (K) EA652_0819 PF02272 DHHA1 domain EA652_0819 PF01411 tRNA synthetases class II (A) EA652_0819 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EA652_0821 PF01632 Ribosomal protein L35 EA652_0822 PF00453 Ribosomal protein L20 EA652_0823 PF02911 Formyl transferase, C-terminal domain EA652_0823 PF00551 Formyl transferase EA652_0824 PF02142 MGS-like domain EA652_0824 PF01808 AICARFT/IMPCHase bienzyme EA652_0826 PF01676 Metalloenzyme superfamily EA652_0826 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EA652_0827 PF00698 Acyl transferase domain EA652_0828 PF01197 Ribosomal protein L31 EA652_0829 PF01513 ATP-NAD kinase EA652_0833 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EA652_0833 PF03725 3' exoribonuclease family, domain 2 EA652_0833 PF01138 3' exoribonuclease family, domain 1 EA652_0833 PF00013 KH domain EA652_0833 PF00575 S1 RNA binding domain EA652_0834 PF00312 Ribosomal protein S15 EA652_0835 PF16198 tRNA pseudouridylate synthase B C-terminal domain EA652_0835 PF01509 TruB family pseudouridylate synthase (N terminal domain) EA652_0846 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EA652_0846 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EA652_0847 PF10502 Signal peptidase, peptidase S26 EA652_0848 PF00012 Hsp70 protein EA652_0849 PF07743 HSCB C-terminal oligomerisation domain EA652_0850 PF01521 Iron-sulphur cluster biosynthesis EA652_0851 PF01592 NifU-like N terminal domain EA652_0852 PF02881 SRP54-type protein, helical bundle domain EA652_0852 PF00448 SRP54-type protein, GTPase domain EA652_0853 PF18073 Rubredoxin metal binding domain EA652_0854 PF13358 DDE superfamily endonuclease EA652_0860 PF00186 Dihydrofolate reductase EA652_0861 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EA652_0861 PF00809 Pterin binding enzyme EA652_0863 PF03070 TENA/THI-4/PQQC family EA652_0865 PF00085 Thioredoxin EA652_0872 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EA652_0872 PF00586 AIR synthase related protein, N-terminal domain EA652_0872 PF02769 AIR synthase related protein, C-terminal domain EA652_0874 PF17755 UvrA DNA-binding domain EA652_0874 PF17760 UvrA interaction domain EA652_0877 PF08245 Mur ligase middle domain EA652_0877 PF02875 Mur ligase family, glutamate ligase domain EA652_0878 PF01053 Cys/Met metabolism PLP-dependent enzyme EA652_0880 PF00012 Hsp70 protein EA652_0881 PF00575 S1 RNA binding domain EA652_0881 PF10150 Ribonuclease E/G family EA652_0881 PF12111 Polyribonucleotide phosphorylase C terminal EA652_0882 PF00471 Ribosomal protein L33 EA652_0884 PF01297 Zinc-uptake complex component A periplasmic EA652_0885 PF00005 ABC transporter EA652_0886 PF03109 ABC1 family EA652_0888 PF08240 Alcohol dehydrogenase GroES-like domain EA652_0888 PF00107 Zinc-binding dehydrogenase EA652_0890 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EA652_0891 PF01027 Inhibitor of apoptosis-promoting Bax1 EA652_0892 PF00588 SpoU rRNA Methylase family EA652_0892 PF08032 RNA 2'-O ribose methyltransferase substrate binding EA652_0894 PF01118 Semialdehyde dehydrogenase, NAD binding domain EA652_0894 PF02774 Semialdehyde dehydrogenase, dimerisation domain EA652_0898 PF13520 Amino acid permease EA652_0900 PF13840 ACT domain EA652_0900 PF00696 Amino acid kinase family EA652_0900 PF01842 ACT domain EA652_0907 PF00580 UvrD/REP helicase N-terminal domain EA652_0907 PF13361 UvrD-like helicase C-terminal domain EA652_0909 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EA652_0910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EA652_0911 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EA652_0911 PF00361 Proton-conducting membrane transporter EA652_0912 PF00361 Proton-conducting membrane transporter EA652_0913 PF00361 Proton-conducting membrane transporter EA652_0914 PF03099 Biotin/lipoate A/B protein ligase family EA652_0914 PF08279 HTH domain EA652_0914 PF02237 Biotin protein ligase C terminal domain EA652_0916 PF03100 CcmE EA652_0922 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EA652_0922 PF10531 SLBB domain EA652_0922 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EA652_0923 PF00707 Translation initiation factor IF-3, C-terminal domain EA652_0923 PF05198 Translation initiation factor IF-3, N-terminal domain EA652_0924 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EA652_0924 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EA652_0924 PF03129 Anticodon binding domain EA652_0927 PF12838 4Fe-4S dicluster domain EA652_0928 PF12631 MnmE helical domain EA652_0928 PF10396 GTP-binding protein TrmE N-terminus EA652_0928 PF01926 50S ribosome-binding GTPase EA652_0930 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_0931 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EA652_0931 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EA652_0932 PF02504 Fatty acid synthesis protein EA652_0933 PF01783 Ribosomal L32p protein family EA652_0935 PF00005 ABC transporter EA652_0938 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EA652_0938 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EA652_0938 PF13288 DXP reductoisomerase C-terminal domain EA652_0940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_0942 PF00266 Aminotransferase class-V EA652_0943 PF01523 Putative modulator of DNA gyrase EA652_0949 PF01367 5'-3' exonuclease, C-terminal SAM fold EA652_0949 PF00476 DNA polymerase family A EA652_0949 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EA652_0950 PF13333 Integrase core domain EA652_0950 PF00665 Integrase core domain EA652_0950 PF13276 HTH-like domain EA652_0956 PF01321 Creatinase/Prolidase N-terminal domain EA652_0956 PF00557 Metallopeptidase family M24 EA652_0957 PF01134 Glucose inhibited division protein A EA652_0957 PF13932 GidA associated domain EA652_0960 PF03023 Lipid II flippase MurJ EA652_0964 PF04860 Phage portal protein EA652_0966 PF03099 Biotin/lipoate A/B protein ligase family EA652_0967 PF02016 LD-carboxypeptidase N-terminal domain EA652_0967 PF17676 LD-carboxypeptidase C-terminal domain EA652_0970 PF00528 Binding-protein-dependent transport system inner membrane component EA652_0971 PF01245 Ribosomal protein L19 EA652_0972 PF01746 tRNA (Guanine-1)-methyltransferase EA652_0973 PF01259 SAICAR synthetase EA652_0974 PF02769 AIR synthase related protein, C-terminal domain EA652_0974 PF00586 AIR synthase related protein, N-terminal domain EA652_0977 PF03471 Transporter associated domain EA652_0977 PF00571 CBS domain EA652_0978 PF01208 Uroporphyrinogen decarboxylase (URO-D) EA652_0981 PF00285 Citrate synthase, C-terminal domain EA652_0982 PF01649 Ribosomal protein S20 EA652_0984 PF02899 Phage integrase, N-terminal SAM-like domain EA652_0984 PF00589 Phage integrase family EA652_0987 PF01594 AI-2E family transporter EA652_0989 PF02542 YgbB family EA652_0989 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EA652_0990 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EA652_0990 PF02222 ATP-grasp domain EA652_0991 PF04379 ApaG domain EA652_0994 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_1002 PF00239 Resolvase, N terminal domain EA652_1002 PF02796 Helix-turn-helix domain of resolvase EA652_1022 PF00023 Ankyrin repeat EA652_1024 PF01555 DNA methylase EA652_1024 PF18755 Restriction Enzyme Adenine Methylase Associated EA652_1027 PF01348 Type II intron maturase EA652_1027 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_1031 PF12419 SNF2 Helicase protein EA652_1031 PF00176 SNF2 family N-terminal domain EA652_1031 PF00271 Helicase conserved C-terminal domain EA652_1032 PF00132 Bacterial transferase hexapeptide (six repeats) EA652_1032 PF14602 Hexapeptide repeat of succinyl-transferase EA652_1032 PF12804 MobA-like NTP transferase domain EA652_1033 PF16363 GDP-mannose 4,6 dehydratase EA652_1037 PF00005 ABC transporter EA652_1037 PF00664 ABC transporter transmembrane region EA652_1038 PF01212 Beta-eliminating lyase EA652_1039 PF01212 Beta-eliminating lyase EA652_1041 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EA652_1041 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EA652_1041 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EA652_1042 PF00892 EamA-like transporter family EA652_1046 PF04002 RadC-like JAB domain EA652_1047 PF01381 Helix-turn-helix EA652_1050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EA652_1052 PF00528 Binding-protein-dependent transport system inner membrane component EA652_1054 PF13368 Topoisomerase C-terminal repeat EA652_1054 PF01751 Toprim domain EA652_1054 PF01396 Topoisomerase DNA binding C4 zinc finger EA652_1054 PF01131 DNA topoisomerase EA652_1058 PF00464 Serine hydroxymethyltransferase EA652_1064 PF07690 Major Facilitator Superfamily EA652_1071 PF01545 Cation efflux family EA652_1073 PF02660 Glycerol-3-phosphate acyltransferase EA652_1074 PF01235 Sodium:alanine symporter family EA652_1075 PF01235 Sodium:alanine symporter family EA652_1076 PF01066 CDP-alcohol phosphatidyltransferase EA652_1077 PF02666 Phosphatidylserine decarboxylase EA652_1078 PF00154 recA bacterial DNA recombination protein EA652_1082 PF13358 DDE superfamily endonuclease EA652_1083 PF00226 DnaJ domain EA652_1083 PF01556 DnaJ C terminal domain EA652_1083 PF00684 DnaJ central domain EA652_1084 PF08245 Mur ligase middle domain EA652_1084 PF02875 Mur ligase family, glutamate ligase domain EA652_1086 PF03364 Polyketide cyclase / dehydrase and lipid transport EA652_1087 PF13462 Thioredoxin EA652_1091 PF12169 DNA polymerase III subunits gamma and tau domain III EA652_1092 PF02575 YbaB/EbfC DNA-binding family EA652_1093 PF13505 Outer membrane protein beta-barrel domain EA652_1094 PF04545 Sigma-70, region 4 EA652_1094 PF04542 Sigma-70 region 2 EA652_1094 PF00140 Sigma-70 factor, region 1.2 EA652_1096 PF02768 DNA polymerase III beta subunit, C-terminal domain EA652_1096 PF00712 DNA polymerase III beta subunit, N-terminal domain EA652_1096 PF02767 DNA polymerase III beta subunit, central domain EA652_1097 PF01416 tRNA pseudouridine synthase EA652_1099 PF00033 Cytochrome b/b6/petB EA652_1099 PF02167 Cytochrome C1 family EA652_1099 PF00032 Cytochrome b(C-terminal)/b6/petD EA652_1100 PF00033 Cytochrome b/b6/petB EA652_1100 PF00032 Cytochrome b(C-terminal)/b6/petD EA652_1101 PF00226 DnaJ domain EA652_1101 PF01556 DnaJ C terminal domain EA652_1101 PF00684 DnaJ central domain EA652_1103 PF01556 DnaJ C terminal domain EA652_1103 PF00226 DnaJ domain EA652_1103 PF00684 DnaJ central domain EA652_1105 PF03129 Anticodon binding domain EA652_1105 PF13393 Histidyl-tRNA synthetase EA652_1106 PF01975 Survival protein SurE EA652_1107 PF02978 Signal peptide binding domain EA652_1107 PF02881 SRP54-type protein, helical bundle domain EA652_1107 PF00448 SRP54-type protein, GTPase domain EA652_1109 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_1110 PF07977 FabA-like domain EA652_1112 PF01103 Surface antigen EA652_1112 PF07244 Surface antigen variable number repeat EA652_1113 PF17820 PDZ domain EA652_1113 PF02163 Peptidase family M50 EA652_1116 PF00216 Bacterial DNA-binding protein EA652_1117 PF00575 S1 RNA binding domain EA652_1118 PF02390 Putative methyltransferase EA652_1123 PF01039 Carboxyl transferase domain EA652_1125 PF06827 Zinc finger found in FPG and IleRS EA652_1125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EA652_1125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EA652_1126 PF01243 Pyridoxamine 5'-phosphate oxidase EA652_1126 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EA652_1128 PF03772 Competence protein EA652_1128 PF00753 Metallo-beta-lactamase superfamily EA652_1130 PF00849 RNA pseudouridylate synthase EA652_1131 PF01219 Prokaryotic diacylglycerol kinase EA652_1135 PF00162 Phosphoglycerate kinase EA652_1137 PF03060 Nitronate monooxygenase EA652_1140 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EA652_1144 PF02817 e3 binding domain EA652_1144 PF00364 Biotin-requiring enzyme EA652_1144 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EA652_1147 PF13662 Toprim domain EA652_1147 PF02132 RecR protein EA652_1148 PF00334 Nucleoside diphosphate kinase EA652_1150 PF00762 Ferrochelatase EA652_1153 PF00227 Proteasome subunit EA652_1154 PF10431 C-terminal, D2-small domain, of ClpB protein EA652_1154 PF07724 AAA domain (Cdc48 subfamily) EA652_1154 PF00004 ATPase family associated with various cellular activities (AAA) EA652_1157 PF00348 Polyprenyl synthetase EA652_1158 PF00550 Phosphopantetheine attachment site EA652_1159 PF02801 Beta-ketoacyl synthase, C-terminal domain EA652_1159 PF00109 Beta-ketoacyl synthase, N-terminal domain EA652_1163 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EA652_1164 PF02511 Thymidylate synthase complementing protein EA652_1170 PF17764 3′ DNA-binding domain (3′BD) EA652_1170 PF18074 Primosomal protein N C-terminal domain EA652_1170 PF00270 DEAD/DEAH box helicase EA652_1170 PF00271 Helicase conserved C-terminal domain EA652_1170 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EA652_1171 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EA652_1171 PF00355 Rieske [2Fe-2S] domain EA652_1172 PF00521 DNA gyrase/topoisomerase IV, subunit A EA652_1172 PF03989 DNA gyrase C-terminal domain, beta-propeller EA652_1176 PF02632 BioY family EA652_1177 PF00881 Nitroreductase family EA652_1178 PF01678 Diaminopimelate epimerase EA652_1179 PF00549 CoA-ligase EA652_1179 PF02629 CoA binding domain EA652_1180 PF08442 ATP-grasp domain EA652_1180 PF00549 CoA-ligase EA652_1183 PF04452 RNA methyltransferase EA652_1186 PF01218 Coproporphyrinogen III oxidase EA652_1187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA652_1187 PF00072 Response regulator receiver domain EA652_1187 PF00512 His Kinase A (phospho-acceptor) domain EA652_1187 PF13188 PAS domain EA652_1187 PF08448 PAS fold EA652_1188 PF13614 AAA domain EA652_1189 PF02195 ParB-like nuclease domain EA652_1189 PF17762 HTH domain found in ParB protein EA652_1192 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EA652_1193 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EA652_1195 PF00483 Nucleotidyl transferase EA652_1195 PF01050 Mannose-6-phosphate isomerase EA652_1197 PF02687 FtsX-like permease family EA652_1197 PF12704 MacB-like periplasmic core domain EA652_1200 PF00231 ATP synthase EA652_1201 PF01523 Putative modulator of DNA gyrase EA652_1202 PF00313 'Cold-shock' DNA-binding domain EA652_1203 PF00271 Helicase conserved C-terminal domain EA652_1203 PF00270 DEAD/DEAH box helicase EA652_1204 PF00004 ATPase family associated with various cellular activities (AAA) EA652_1204 PF07724 AAA domain (Cdc48 subfamily) EA652_1204 PF17871 AAA lid domain EA652_1204 PF02861 Clp amino terminal domain, pathogenicity island component EA652_1204 PF10431 C-terminal, D2-small domain, of ClpB protein EA652_1206 PF01791 DeoC/LacD family aldolase EA652_1208 PF01180 Dihydroorotate dehydrogenase EA652_1209 PF00035 Double-stranded RNA binding motif EA652_1209 PF14622 Ribonuclease-III-like EA652_1211 PF13091 PLD-like domain EA652_1215 PF00210 Ferritin-like domain EA652_1216 PF02104 SURF1 family EA652_1217 PF02254 TrkA-N domain EA652_1217 PF00999 Sodium/hydrogen exchanger family EA652_1219 PF02223 Thymidylate kinase EA652_1221 PF17862 AAA+ lid domain EA652_1221 PF06480 FtsH Extracellular EA652_1221 PF01434 Peptidase family M41 EA652_1221 PF00004 ATPase family associated with various cellular activities (AAA) EA652_1222 PF01171 PP-loop family EA652_1223 PF00691 OmpA family EA652_1228 PF00719 Inorganic pyrophosphatase EA652_1230 PF09312 SurA N-terminal domain EA652_1230 PF00639 PPIC-type PPIASE domain EA652_1231 PF07992 Pyridine nucleotide-disulphide oxidoreductase EA652_1236 PF03717 Penicillin-binding Protein dimerisation domain EA652_1236 PF00905 Penicillin binding protein transpeptidase domain EA652_1237 PF02401 LytB protein EA652_1266 PF01258 Prokaryotic dksA/traR C4-type zinc finger EA652_1269 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EA652_1269 PF01926 50S ribosome-binding GTPase EA652_1272 PF00953 Glycosyl transferase family 4 EA652_1273 PF01351 Ribonuclease HII EA652_1277 PF00361 Proton-conducting membrane transporter EA652_1278 PF01098 Cell cycle protein EA652_1279 PF00156 Phosphoribosyl transferase domain EA652_1279 PF13537 Glutamine amidotransferase domain EA652_1280 PF02245 Methylpurine-DNA glycosylase (MPG) EA652_1281 PF05496 Holliday junction DNA helicase RuvB P-loop domain EA652_1281 PF05491 RuvB C-terminal winged helix domain EA652_1281 PF17864 RuvB AAA lid domain EA652_1282 PF01330 RuvA N terminal domain EA652_1282 PF07499 RuvA, C-terminal domain EA652_1284 PF00579 tRNA synthetases class I (W and Y) EA652_1287 PF00293 NUDIX domain EA652_1288 PF01026 TatD related DNase EA652_1289 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EA652_1289 PF00056 lactate/malate dehydrogenase, NAD binding domain EA652_1290 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EA652_1291 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EA652_1292 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EA652_1293 PF01230 HIT domain EA652_1296 PF02875 Mur ligase family, glutamate ligase domain EA652_1296 PF08245 Mur ligase middle domain EA652_1296 PF01225 Mur ligase family, catalytic domain EA652_1297 PF08338 Domain of unknown function (DUF1731) EA652_1297 PF01370 NAD dependent epimerase/dehydratase family EA652_1300 PF00183 Hsp90 protein EA652_1303 PF00155 Aminotransferase class I and II EA652_1306 PF01132 Elongation factor P (EF-P) OB domain EA652_1306 PF08207 Elongation factor P (EF-P) KOW-like domain EA652_1306 PF09285 Elongation factor P, C-terminal EA652_1307 PF05239 PRC-barrel domain EA652_1307 PF01782 RimM N-terminal domain EA652_1308 PF00202 Aminotransferase class-III EA652_1309 PF00989 PAS fold EA652_1309 PF00512 His Kinase A (phospho-acceptor) domain EA652_1309 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EA652_1310 PF00578 AhpC/TSA family EA652_1311 PF02463 RecF/RecN/SMC N terminal domain EA652_1316 PF03631 Virulence factor BrkB EA652_1318 PF02142 MGS-like domain EA652_1318 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EA652_1318 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EA652_1323 PF04539 Sigma-70 region 3 EA652_1323 PF04546 Sigma-70, non-essential region EA652_1323 PF03979 Sigma-70 factor, region 1.1 EA652_1323 PF00140 Sigma-70 factor, region 1.2 EA652_1323 PF04542 Sigma-70 region 2 EA652_1323 PF04545 Sigma-70, region 4 EA652_1324 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EA652_1326 PF00361 Proton-conducting membrane transporter EA652_1326 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EA652_1326 PF13244 Domain of unknown function (DUF4040) EA652_1327 PF03334 Na+/H+ antiporter subunit EA652_1328 PF01192 RNA polymerase Rpb6 EA652_1330 PF00731 AIR carboxylase EA652_1331 PF08676 MutL C terminal dimerisation domain EA652_1331 PF01119 DNA mismatch repair protein, C-terminal domain EA652_1332 PF02779 Transketolase, pyrimidine binding domain EA652_1332 PF16870 2-oxoglutarate dehydrogenase C-terminal EA652_1332 PF00676 Dehydrogenase E1 component EA652_1332 PF16078 2-oxoglutarate dehydrogenase N-terminus EA652_1337 PF13784 Fic/DOC family N-terminal EA652_1337 PF02661 Fic/DOC family EA652_1338 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EA652_1341 PF01040 UbiA prenyltransferase family EA652_1342 PF02033 Ribosome-binding factor A EA652_1343 PF04760 Translation initiation factor IF-2, N-terminal region EA652_1343 PF11987 Translation-initiation factor 2 EA652_1343 PF00009 Elongation factor Tu GTP binding domain EA652_1344 PF08529 NusA N-terminal domain EA652_1344 PF00575 S1 RNA binding domain EA652_1344 PF13184 NusA-like KH domain EA652_1345 PF00873 AcrB/AcrD/AcrF family EA652_1347 PF00120 Glutamine synthetase, catalytic domain